Citrus Sinensis ID: 036723
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 290 | 2.2.26 [Sep-21-2011] | |||||||
| Q09893 | 226 | Uncharacterized protein C | yes | no | 0.7 | 0.898 | 0.279 | 7e-15 | |
| P53078 | 280 | Suppressor of disruption | yes | no | 0.637 | 0.660 | 0.288 | 8e-13 | |
| P40025 | 321 | Phosphate metabolism prot | no | no | 0.437 | 0.395 | 0.281 | 4e-05 |
| >sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 104/261 (39%), Gaps = 58/261 (22%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAI 77
+ FDLD+ +YP + + + I + KL I + L Y+ YG + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 78 GYQFDCDDFHSYVHGRLPY-MMLKPDPVLRNLLLSL--PIRKVIFTNADKTHAARVLSRL 134
++ D D+ V LP ++K D VLR +LL L + IFTNA HA RVL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 135 GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVV 194
G+EDCF+ I YC DL +
Sbjct: 127 GIEDCFDGIT---------------------------------YCDYNAKDL-------I 146
Query: 195 CKPFEEAFEQVFKIANINPR-KTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVD---- 249
KP E +E+V + A + + K IF DDS N+ + G W T E D
Sbjct: 147 AKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILGAREFG----WKYTVQLVEHGDPLPQ 202
Query: 250 -----YALESIHNIKEALPEL 265
+ + IH K L E+
Sbjct: 203 PQAGSHVIRDIHKFKHLLDEI 223
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 47/232 (20%)
Query: 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL 71
N FD+D+ +Y ++ + + ++I + L + L S YK YG +
Sbjct: 52 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAI 111
Query: 72 AGLRAIGYQFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSL----PIRKV-IFTNADKT 125
GL + ++ + +++ V LP +LKPD LRN+LL L I K+ +FTNA K
Sbjct: 112 RGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKN 170
Query: 126 HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185
HA R L LG+ D LFD YC D
Sbjct: 171 HAIRCLRLLGIAD---------------------------------LFDGLTYCDYSRTD 197
Query: 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFF-DDSIRNLETGKRLGLHT 236
+VCKP +AFE+ K + + + +F DDS +N+ETG +LG+ T
Sbjct: 198 ------TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKT 243
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Could be an enzyme that inactivates 6-azauracil by modifying it. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA 76
FD+D+T+Y ++ + + +++ + +L ++ + L S Y+ YG ++ GL
Sbjct: 54 VFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIK 113
Query: 77 IGYQFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSLPIRKV-------IFTNADKTHAA 128
D +++++ LP LKPD LR LL++L +K+ +FTN+ K HA
Sbjct: 114 NKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAI 173
Query: 129 RVLSRLGLEDCFERI 143
R + LG+ D F+ I
Sbjct: 174 RCVKILGIADLFDGI 188
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May be involved in phosphate metabolism. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 290 | ||||||
| 224054678 | 286 | predicted protein [Populus trichocarpa] | 0.968 | 0.982 | 0.737 | 1e-120 | |
| 255586172 | 282 | catalytic, putative [Ricinus communis] g | 0.972 | 1.0 | 0.724 | 1e-119 | |
| 356550285 | 283 | PREDICTED: uncharacterized protein C24B1 | 0.972 | 0.996 | 0.687 | 1e-113 | |
| 297796893 | 282 | hypothetical protein ARALYDRAFT_496081 [ | 0.965 | 0.992 | 0.671 | 1e-113 | |
| 30697234 | 282 | haloacid dehalogenase-like hydrolase dom | 0.965 | 0.992 | 0.660 | 1e-111 | |
| 449455096 | 281 | PREDICTED: uncharacterized protein C24B1 | 0.965 | 0.996 | 0.687 | 1e-109 | |
| 30697236 | 281 | haloacid dehalogenase-like hydrolase dom | 0.962 | 0.992 | 0.660 | 1e-109 | |
| 357454203 | 291 | Ripening-related protein-like hydrolase- | 0.968 | 0.965 | 0.691 | 1e-109 | |
| 21618155 | 282 | putative ripening-related protein-like [ | 0.965 | 0.992 | 0.657 | 1e-109 | |
| 356557414 | 283 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.972 | 0.996 | 0.656 | 1e-108 |
| >gi|224054678|ref|XP_002298348.1| predicted protein [Populus trichocarpa] gi|118486575|gb|ABK95126.1| unknown [Populus trichocarpa] gi|222845606|gb|EEE83153.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/290 (73%), Positives = 249/290 (85%), Gaps = 9/290 (3%)
Query: 3 YKNENKQVS-NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCV 61
Y+++ KQ + KYDCLLFD+DDT+YPL SGLS VT+NIQEYM++KL IEE+K PELCV
Sbjct: 4 YEDDQKQQALEHKYDCLLFDIDDTLYPLGSGLSVHVTQNIQEYMIKKLGIEESKAPELCV 63
Query: 62 SLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTN 121
SLYK+YGTT+AGLRAIG++FD DDFHS+VHGRLPY MLKPDPVLRN+LL++P+RKV+FTN
Sbjct: 64 SLYKYYGTTMAGLRAIGHKFDYDDFHSFVHGRLPYQMLKPDPVLRNILLNVPVRKVVFTN 123
Query: 122 ADKTHAARVLSRLGLEDCFERIISFETLN-STDKGTVLVDQDASESERPTELFDIDDYCS 180
ADK HA+RVLSRLGLEDCFERII FETLN + +KG VD D E+FDID+Y +
Sbjct: 124 ADKAHASRVLSRLGLEDCFERIICFETLNDAANKGNDPVDGDDR------EVFDIDEYTT 177
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
P+ADL LP+TPVVCKPFEEAFEQVFKIANI+PRKT+FFDDSIRNL+TGK LGLHTVWVG
Sbjct: 178 CPDADLVLPKTPVVCKPFEEAFEQVFKIANISPRKTLFFDDSIRNLQTGKGLGLHTVWVG 237
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIETSVIA 290
+SHR EGVD ALES+HNIKEALPELWE A + SE I YS KV+IETSV A
Sbjct: 238 SSHRIEGVDCALESLHNIKEALPELWE-ANDKSEGIKYSKKVAIETSVEA 286
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255586172|ref|XP_002533745.1| catalytic, putative [Ricinus communis] gi|223526333|gb|EEF28632.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/290 (72%), Positives = 249/290 (85%), Gaps = 8/290 (2%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
MEY+ N+Q +KY+CLLFD+DDT+YPL SGLS+ VTKNIQEYM+QKL IEE+KV ELC
Sbjct: 1 MEYEG-NQQHVLEKYECLLFDVDDTLYPLRSGLSQHVTKNIQEYMVQKLGIEESKVAELC 59
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
VSLYK YGTTLAGLRAIG+ D DDFHS+VHGRLPY ++KPDPVLRNLL SLP+RK++FT
Sbjct: 60 VSLYKLYGTTLAGLRAIGHNIDYDDFHSFVHGRLPYDIVKPDPVLRNLLHSLPVRKIVFT 119
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
NADKTHA+RVLSRLGLEDCFE I+SFETLN+T KG V++D + +FDI++Y +
Sbjct: 120 NADKTHASRVLSRLGLEDCFEGILSFETLNNTTKGNESVNEDEN------GVFDINEYTA 173
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
PNA L LPR+PVVCKPFE+AFEQVFKI +INP++T+FFDDSIRNL+TGKRLGL TVWVG
Sbjct: 174 APNAGLALPRSPVVCKPFEDAFEQVFKITSINPQRTLFFDDSIRNLQTGKRLGLTTVWVG 233
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIETSVIA 290
+SHR EGVDYALESIHNIKEALPELW+ A E S+ + YSG+V+IETSV A
Sbjct: 234 SSHRTEGVDYALESIHNIKEALPELWD-ANEKSDGVRYSGRVAIETSVKA 282
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550285|ref|XP_003543518.1| PREDICTED: uncharacterized protein C24B11.05-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/291 (68%), Positives = 243/291 (83%), Gaps = 9/291 (3%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
ME ++ +++S KYDCLLFDLDDT+YPL+SGL+++V KNIQEYMLQKL I EAKVPELC
Sbjct: 1 MENGDQFQEISKGKYDCLLFDLDDTLYPLSSGLAEQVKKNIQEYMLQKLWISEAKVPELC 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
SLYK YGTT+AGL+AIGY FD DDFH +VHGRLPY MLKPDPVLR +LLSLP+RKV+FT
Sbjct: 61 FSLYKTYGTTMAGLKAIGYDFDYDDFHGFVHGRLPYDMLKPDPVLRGILLSLPVRKVVFT 120
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE-SERPTELFDIDDYC 179
N+DK HA+RVL RLGLEDCFER+ISFETLNS+ ++D SE + TE+FD +Y
Sbjct: 121 NSDKAHASRVLHRLGLEDCFERVISFETLNSS-------NEDGSEYKQSSTEIFDFYEYI 173
Query: 180 SRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
RP++D+ LPRTPVVCKPF++A+E+VF +A+I+P++T+FFDDS+RNL+TGK LGLHTV V
Sbjct: 174 GRPDSDIVLPRTPVVCKPFQDAYEKVFNMADIDPQRTLFFDDSLRNLQTGKSLGLHTVLV 233
Query: 240 GTSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIETSVIA 290
GTS R GVD+ALESIHN+KEA PELWE A E ES+ S KVSIETSVIA
Sbjct: 234 GTSVRTTGVDHALESIHNMKEAFPELWE-ANEKPESVECSRKVSIETSVIA 283
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796893|ref|XP_002866331.1| hypothetical protein ARALYDRAFT_496081 [Arabidopsis lyrata subsp. lyrata] gi|297312166|gb|EFH42590.1| hypothetical protein ARALYDRAFT_496081 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 231/286 (80%), Gaps = 6/286 (2%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
M Y+ +Q S +YDCLLFD+DDT+YPL+SGL+ EV KNIQEYM+QKL +EE KV ELC
Sbjct: 1 MSYEENFQQTSEARYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGVEEDKVQELC 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
+SLYK YGTT+AGL+A+GY FD DDFH +VHGRLPY LKPDP+LRN++LSLPIRKV+FT
Sbjct: 61 LSLYKIYGTTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFT 120
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
NADK HAA+V++RLGLE+CFE+IISFETLNS K VD + E+FDI Y +
Sbjct: 121 NADKAHAAKVIARLGLENCFEKIISFETLNSITKTESPVDT------KTREIFDISSYMA 174
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
P+ +ELP+T VVCKP E AFEQVFK+ANINP+KT+FFDDSIRN++TGKR+GLHTVWVG
Sbjct: 175 NPDPSIELPKTTVVCKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGKRVGLHTVWVG 234
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIET 286
TSHR EGVD ALE IHNI+EALPELWE + +E I KV+IET
Sbjct: 235 TSHREEGVDIALEHIHNIREALPELWEAVDDKAEEIRSRQKVAIET 280
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Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30697234|ref|NP_851223.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|8885553|dbj|BAA97483.1| ripening-related protein-like; hydrolase-like [Arabidopsis thaliana] gi|17979377|gb|AAL49914.1| putative ripening-related protein [Arabidopsis thaliana] gi|20465781|gb|AAM20379.1| putative ripening protein [Arabidopsis thaliana] gi|332009812|gb|AED97195.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/286 (66%), Positives = 230/286 (80%), Gaps = 6/286 (2%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
M Y+ +Q S KYDCLLFD+DDT+YPL+SGL+ EV KNIQEYM+QKL IEE KV ELC
Sbjct: 1 MAYEEHFQQTSEAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELC 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
+SLYK YGTT+AGL+A+GY FD DDFH +VHGRLPY LKPDP+LRN++LSLPIRKV+FT
Sbjct: 61 LSLYKIYGTTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFT 120
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
NADK HAA++++RLGLE CFE+IISFETLN K VD + E+FDI Y +
Sbjct: 121 NADKAHAAKIIARLGLEGCFEKIISFETLNPITKTESPVDT------KTREIFDIISYMA 174
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
P++ +ELP+T VVCKP E AFEQVFK+ANINP+KT+FFDDSIRN++TGKR+GLHTVWVG
Sbjct: 175 NPDSSIELPKTSVVCKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGKRVGLHTVWVG 234
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIET 286
TSHR EGVD ALE IHNI+EALP+LW+ + ++ I KV+IET
Sbjct: 235 TSHREEGVDIALEHIHNIREALPQLWDAVDDKAKEIRTRQKVAIET 280
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449455096|ref|XP_004145289.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus] gi|449470760|ref|XP_004153084.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus] gi|449510886|ref|XP_004163800.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/291 (68%), Positives = 236/291 (81%), Gaps = 11/291 (3%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
ME +E Q+S+ KY+CLLFDLDDT+YP SGL+KE+TKNIQEYM++KL +EE VPELC
Sbjct: 1 MENGDEFNQISDAKYECLLFDLDDTLYPFNSGLAKEITKNIQEYMIEKLGMEE-NVPELC 59
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
+SLYK YGTT+AGLRAIGY FD DDFHS+VHGRLPY MLKPDP+LRNLL SLPIRK IFT
Sbjct: 60 ISLYKIYGTTMAGLRAIGYNFDYDDFHSFVHGRLPYDMLKPDPLLRNLLHSLPIRKFIFT 119
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
N D HA R L RLGLEDCFE I+ FETLN DKGTV + E + +FDI+ Y S
Sbjct: 120 NGDMAHANRALKRLGLEDCFEGILCFETLNP-DKGTV-------DEEEGSVIFDINQYMS 171
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
PN+DL+LP+TPVVCKPFEEA++QVF+IANINP+KT+FFDDS+RNL+TGK +GLHTV VG
Sbjct: 172 NPNSDLDLPKTPVVCKPFEEAYKQVFEIANINPKKTLFFDDSVRNLQTGKLVGLHTVLVG 231
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGK-VSIETSVIA 290
S R +GVD+A ESIHNIKE LPELWE E +S++YS K V+IETSV A
Sbjct: 232 NSQRIKGVDHAFESIHNIKEGLPELWEDM-EKLKSVTYSRKEVAIETSVRA 281
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30697236|ref|NP_200756.2| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|332009813|gb|AED97196.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/286 (66%), Positives = 229/286 (80%), Gaps = 7/286 (2%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
M Y+ +Q S KYDCLLFD+DDT+YPL+SGL+ EV KNIQEYM+QKL IEE KV ELC
Sbjct: 1 MAYEEHFQQTSEAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELC 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
+SLYK YGTT+AGL+A+GY FD DDFH +VHGRLPY LKPDP+LRN++LSLPIRKV FT
Sbjct: 61 LSLYKIYGTTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKV-FT 119
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
NADK HAA++++RLGLE CFE+IISFETLN K VD + E+FDI Y +
Sbjct: 120 NADKAHAAKIIARLGLEGCFEKIISFETLNPITKTESPVDT------KTREIFDIISYMA 173
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
P++ +ELP+T VVCKP E AFEQVFK+ANINP+KT+FFDDSIRN++TGKR+GLHTVWVG
Sbjct: 174 NPDSSIELPKTSVVCKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGKRVGLHTVWVG 233
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIET 286
TSHR EGVD ALE IHNI+EALP+LW+ + ++ I KV+IET
Sbjct: 234 TSHREEGVDIALEHIHNIREALPQLWDAVDDKAKEIRTRQKVAIET 279
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357454203|ref|XP_003597382.1| Ripening-related protein-like hydrolase-like protein [Medicago truncatula] gi|355486430|gb|AES67633.1| Ripening-related protein-like hydrolase-like protein [Medicago truncatula] gi|388496672|gb|AFK36402.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/285 (69%), Positives = 237/285 (83%), Gaps = 4/285 (1%)
Query: 9 QVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYG 68
Q S KYDCLLFDLDDT+YPL+SGLS VTKNIQEYMLQKL I+E +VPELCVSLYK YG
Sbjct: 8 QQSKAKYDCLLFDLDDTLYPLSSGLSAHVTKNIQEYMLQKLEIKEDRVPELCVSLYKIYG 67
Query: 69 TTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAA 128
TT+AGL+AIGY FD DDFH +VHGRLPY MLKPDPVLR +LLSLP RK++FTN+D HA
Sbjct: 68 TTMAGLKAIGYDFDYDDFHGFVHGRLPYNMLKPDPVLRGILLSLPFRKIVFTNSDDAHAN 127
Query: 129 RVLSRLGLEDCFERIISFETLNSTDKGTVLV--DQDASE-SERPTELFDIDDYCSRPNAD 185
RVL RLGLEDCFERIISFETLNS+ + ++D++E + TE+FD +Y RP+A+
Sbjct: 128 RVLQRLGLEDCFERIISFETLNSSKSNNINSPHNKDSNEYKQSSTEIFDFYEYICRPDAN 187
Query: 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRA 245
+ LP+TPVVCKPF++AFE+VFK+A+I+P++T+FFDDSIRN++TGK LGLHTV VGTS R
Sbjct: 188 IVLPKTPVVCKPFQDAFEKVFKMADIDPQRTLFFDDSIRNIQTGKSLGLHTVLVGTSLRT 247
Query: 246 EGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIETSVIA 290
GVD+ALESIHN+KEA PELWE A E S+ + YS KV+IETSV A
Sbjct: 248 TGVDHALESIHNMKEAFPELWE-ADEKSKIVKYSRKVAIETSVKA 291
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21618155|gb|AAM67205.1| putative ripening-related protein-like [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/286 (65%), Positives = 228/286 (79%), Gaps = 6/286 (2%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
M Y+ +Q S KYDCLLFD+DDT+YPL+SGL+ EV KNIQEYM+QKL IEE KV ELC
Sbjct: 1 MAYEEHFQQTSEAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELC 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
+SLYK YGTT+AGL+A+GY FD DDFH +VHGRLPY LKPDP+LRN++LSLPI KV+FT
Sbjct: 61 LSLYKIYGTTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIWKVVFT 120
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
NADK HAA++++RLGLE CFE+IISFETLN K VD + E+FDI Y +
Sbjct: 121 NADKAHAAKIIARLGLEGCFEKIISFETLNPITKTESPVDT------KTREIFDIISYMA 174
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
P++ +ELP+T VVCKP E AFEQVFK+ANINP+KT+FFDDSIRN++TGKR+GLHTVWVG
Sbjct: 175 NPDSSIELPKTSVVCKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGKRVGLHTVWVG 234
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIET 286
TSHR EGVD ALE IHNI+EAL +LW+ + +E I KV+IET
Sbjct: 235 TSHREEGVDIALEHIHNIREALLQLWDAVDDKAEEIRTRQKVAIET 280
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356557414|ref|XP_003547011.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C24B11.05-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/291 (65%), Positives = 239/291 (82%), Gaps = 9/291 (3%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
M+ ++ +++S KYDCLLFDLD T+YPL+SGL+++V KNIQEYMLQKL I EAKVPE C
Sbjct: 1 MKNGDQFQEISKGKYDCLLFDLDGTLYPLSSGLAEQVKKNIQEYMLQKLGIPEAKVPESC 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
SLYK YGTT+AGL+AIGY FD DDFH+++HGRLPY MLKPDPVLR +LLSLP+ K++FT
Sbjct: 61 FSLYKTYGTTMAGLKAIGYDFDYDDFHAFIHGRLPYDMLKPDPVLRGILLSLPVPKIVFT 120
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESE-RPTELFDIDDYC 179
N+DK HA+RVL RLGLEDCFER+ISFETLNS+ ++D +E + T +FD +Y
Sbjct: 121 NSDKVHASRVLHRLGLEDCFERVISFETLNSS-------NEDGNEYKPSSTGIFDFYEYI 173
Query: 180 SRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
RP++D+ LPRTPVVCKPF++AFE+VF +A+I+P++T+FFDDS+RNL+TGK LGLHTV V
Sbjct: 174 RRPDSDILLPRTPVVCKPFQDAFEKVFDMADIDPQRTLFFDDSLRNLQTGKSLGLHTVMV 233
Query: 240 GTSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIETSVIA 290
S RA GVD+ALESIHN+KEA PELWE A E ES+ S KVSIETS+IA
Sbjct: 234 AASRRATGVDHALESIHNMKEAFPELWE-ANEKPESVECSXKVSIETSLIA 283
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 290 | ||||||
| TAIR|locus:2148343 | 282 | AT5G59480 [Arabidopsis thalian | 0.965 | 0.992 | 0.660 | 4.2e-102 | |
| TAIR|locus:2185223 | 280 | AT5G02230 [Arabidopsis thalian | 0.965 | 1.0 | 0.579 | 1.6e-86 | |
| TAIR|locus:2148358 | 266 | AT5G59490 [Arabidopsis thalian | 0.503 | 0.548 | 0.626 | 1.7e-80 | |
| TAIR|locus:2045422 | 263 | AT2G32150 [Arabidopsis thalian | 0.465 | 0.513 | 0.548 | 4.2e-57 | |
| TAIR|locus:2079522 | 249 | AT3G62040 [Arabidopsis thalian | 0.562 | 0.654 | 0.612 | 2.4e-51 | |
| POMBASE|SPAC24B11.05 | 226 | SPAC24B11.05 "pyrimidine 5'-nu | 0.462 | 0.592 | 0.352 | 1.6e-20 | |
| TIGR_CMR|SPO_1374 | 214 | SPO_1374 "pyrimidine 5'-nucleo | 0.437 | 0.593 | 0.317 | 2.2e-20 | |
| DICTYBASE|DDB_G0293862 | 249 | DDB_G0293862 "haloacid dehalog | 0.475 | 0.554 | 0.380 | 1.1e-18 | |
| UNIPROTKB|G4MVR5 | 238 | MGG_01783 "Uncharacterized pro | 0.424 | 0.516 | 0.320 | 5.5e-16 | |
| SGD|S000003192 | 280 | SDT1 "Pyrimidine nucleotidase" | 0.437 | 0.453 | 0.340 | 5.8e-15 |
| TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
Identities = 189/286 (66%), Positives = 230/286 (80%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
M Y+ +Q S KYDCLLFD+DDT+YPL+SGL+ EV KNIQEYM+QKL IEE KV ELC
Sbjct: 1 MAYEEHFQQTSEAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELC 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
+SLYK YGTT+AGL+A+GY FD DDFH +VHGRLPY LKPDP+LRN++LSLPIRKV+FT
Sbjct: 61 LSLYKIYGTTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFT 120
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
NADK HAA++++RLGLE CFE+IISFETLN K VD + E+FDI Y +
Sbjct: 121 NADKAHAAKIIARLGLEGCFEKIISFETLNPITKTESPVDT------KTREIFDIISYMA 174
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
P++ +ELP+T VVCKP E AFEQVFK+ANINP+KT+FFDDSIRN++TGKR+GLHTVWVG
Sbjct: 175 NPDSSIELPKTSVVCKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGKRVGLHTVWVG 234
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIET 286
TSHR EGVD ALE IHNI+EALP+LW+ + ++ I KV+IET
Sbjct: 235 TSHREEGVDIALEHIHNIREALPQLWDAVDDKAKEIRTRQKVAIET 280
|
|
| TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 168/290 (57%), Positives = 222/290 (76%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
ME++N ++QKYDCLLFDLDDT+YPL+SG+++E NI++YM +KL I + K+ EL
Sbjct: 1 MEFENRYGLATSQKYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELS 60
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
LYK YGTT+AGLRAIGY+FD D++HS+VHGRLPY +KPD VLR+LLLSLP+RKVIFT
Sbjct: 61 DLLYKNYGTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFT 120
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180
NAD+ HAA+ L +LGLEDCFE II FETLN L+ +A+ + +E+FDI + +
Sbjct: 121 NADRVHAAKALKKLGLEDCFEGIICFETLN-------LMHTNAASNN--SEIFDIVGHFN 171
Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
R LP+TPVVCKP E A E+ +IANI+P +T+FF+DS+RN++ GKR+GL+TV VG
Sbjct: 172 RSEPVGSLPKTPVVCKPSESAIEKALEIANIDPNRTLFFEDSVRNVQAGKRVGLYTVLVG 231
Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYSGKVSIETSVIA 290
S + +G DYALE+IHN+KEA+PELWE + S + YSGKV++ETSV A
Sbjct: 232 KSTKVKGADYALENIHNMKEAIPELWE-SDRKSSDVGYSGKVAVETSVRA 280
|
|
| TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 495 (179.3 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 94/150 (62%), Positives = 119/150 (79%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELC 60
ME+ N S +Y+CLLFDLDDT+YPL+SGLS + NI EYM++KL I+E V EL
Sbjct: 1 MEFVNS----SPPRYECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDGVVELN 56
Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120
LYK YGT++AGL+A+GY+FD D++H YVHGRLPY LKPDPVLR+LLL LP+RK++F+
Sbjct: 57 QILYKKYGTSMAGLKAVGYEFDNDEYHRYVHGRLPYENLKPDPVLRSLLLGLPLRKLVFS 116
Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLN 150
N D+ H + L+RLG+EDCFERIISFETLN
Sbjct: 117 NGDEVHVMKALTRLGIEDCFERIISFETLN 146
|
|
| TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 413 (150.4 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 74/135 (54%), Positives = 103/135 (76%)
Query: 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR 75
+CL+FDLDDT+YPL +G++ V KNI +++++K E+K L V L+K YG+TLAGLR
Sbjct: 7 NCLIFDLDDTLYPLKTGIAPAVKKNIDDFLVEKFGFSESKASSLRVELFKTYGSTLAGLR 66
Query: 76 AIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLG 135
A+G+ D++HS+VHGRLPY ++P+ LRNLL + RK+IFTN+DK HA +VL +LG
Sbjct: 67 ALGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKIKQRKIIFTNSDKNHAVKVLKKLG 126
Query: 136 LEDCFERIISFETLN 150
LEDCFE +I FET+N
Sbjct: 127 LEDCFEEMICFETMN 141
|
|
| TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 101/165 (61%), Positives = 129/165 (78%)
Query: 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL 74
Y+CL FD+DDT+YPL+ G++ NIQE+ML +L IEE++VP+LC+ LYK YGTT+AGL
Sbjct: 8 YECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDLYKEYGTTMAGL 67
Query: 75 RAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRL 134
+ +GY+FD D+FH YVHGRLPY LKPDP+LRNLLLS+P RK+IFTNADK HA R L+RL
Sbjct: 68 KVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNADKAHATRALNRL 127
Query: 135 GLEDCFERIISFETLN-STDKGTVLVDQDASES-ERPTELFDIDD 177
GLEDCFE II FETLN S+D T ++ + + E+ E + DI D
Sbjct: 128 GLEDCFEGIICFETLNPSSDSNTQILCKPSVEAFEAAIRIADIVD 172
|
|
| POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 180 (68.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 49/139 (35%), Positives = 72/139 (51%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAI 77
+ FDLD+ +YP + + + I + KL I + L Y+ YG + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 78 GYQFDCDDFHSYVHGRLPY-MMLKPDPVLRNLLLSLPIR-KV-IFTNADKTHAARVLSRL 134
++ D D+ V LP ++K D VLR +LL L + K IFTNA HA RVL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 135 GLEDCFERIISFETLNSTD 153
G+EDCF+ I ++ N+ D
Sbjct: 127 GIEDCFDGI-TYCDYNAKD 144
|
|
| TIGR_CMR|SPO_1374 SPO_1374 "pyrimidine 5'-nucleotidase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 174 (66.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 19 LFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIG 78
+FDLD+T+YP L ++ + Y+++ L + A+ L ++ YGTTLAGL
Sbjct: 13 VFDLDNTLYPPAMRLFDQIEVRMTAYVMEALGVTRAEADRLRAHYWRQYGTTLAGLMR-E 71
Query: 79 YQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLED 138
+ D D + VH + + PD L + + +LP R++++TN +A RVL+ GL
Sbjct: 72 HGLDPDPYLVAVH-EVDMSHMTPDTALASHIRALPGRRIVYTNGSAPYAERVLAARGLTG 130
Query: 139 CFERIISFE 147
F+ I E
Sbjct: 131 LFDAIYGVE 139
|
|
| DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 54/142 (38%), Positives = 80/142 (56%)
Query: 8 KQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY 67
K +K LLFDLD+T+YP + GL+ +V+ I +YM L + +V ++ YK Y
Sbjct: 14 KNNGERKIHTLLFDLDNTLYPKSCGLAAQVSNRITQYMSIILNLPMEEVDKVRNHYYKTY 73
Query: 68 GTTLAGLRAIGYQFDCDDFHSYVHGRLPYMM-LKPDPVLRNLLLSLP--IRKVIFTNADK 124
G TL GL + ++ + D + YVHG L LKPD L L S+ ++KVIF+NAD
Sbjct: 74 GLTLKGLM-MNHEVNIDKYLDYVHGGLDLKSHLKPDARLHACLKSVKSGVKKVIFSNADI 132
Query: 125 THAARVLSRLGLEDCFERIISF 146
H RV L ++DCF+ + +
Sbjct: 133 GHCKRVTRELEIDDCFDAWLDY 154
|
|
| UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 153 (58.9 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 20 FDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGY 79
FD+D+ +YP ++ + + I +Y + L + + L Y+ YG + GL +
Sbjct: 21 FDIDNCLYPKSAKVHDRMADLIDKYFAEHLSLSWDEAVRLHKEYYQNYGLAIEGL-VRHH 79
Query: 80 QFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSLPIRKV---IFTNADKTHAARVLSRLG 135
Q D +++S V LP ++KP+P LR +L + KV +FTNA HA RV+ L
Sbjct: 80 QIDPLEYNSKVDDALPLEGIIKPNPQLRKMLEDIDRSKVKLWLFTNAYVNHARRVVRLLE 139
Query: 136 LEDCFERI 143
+ED F+ I
Sbjct: 140 IEDLFDGI 147
|
|
| SGD|S000003192 SDT1 "Pyrimidine nucleotidase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 147 (56.8 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 47/138 (34%), Positives = 72/138 (52%)
Query: 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQ--KLCIEEAKVPELCVSLYKFYGT 69
N FD+D+ +Y ++ + + ++I + KL E+A V L S YK YG
Sbjct: 52 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHV--LNNSYYKEYGL 109
Query: 70 TLAGLRAIGYQFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSL----PIRKV-IFTNAD 123
+ GL + ++ + +++ V LP +LKPD LRN+LL L I K+ +FTNA
Sbjct: 110 AIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAY 168
Query: 124 KTHAARVLSRLGLEDCFE 141
K HA R L LG+ D F+
Sbjct: 169 KNHAIRCLRLLGIADLFD 186
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3.68 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 290 | |||
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 1e-72 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 1e-32 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 4e-21 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 6e-19 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 3e-05 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-05 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 9e-05 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 1e-04 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 3e-04 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 0.002 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 1e-72
Identities = 90/224 (40%), Positives = 124/224 (55%), Gaps = 41/224 (18%)
Query: 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR 75
D FDLD+T+YP ++G+ ++ +NI E++ +L + + L YK YGTTLAGL
Sbjct: 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSPEEARVLRKDYYKEYGTTLAGLM 60
Query: 76 AIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLG 135
+ ++ D D++ YVHGRLPY LKPDP LRNLLL LP RK+IFTN D+ HA R L RLG
Sbjct: 61 IL-HEIDADEYLRYVHGRLPYDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLG 119
Query: 136 LEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVC 195
+EDCF+ I F+T N ++
Sbjct: 120 IEDCFDGIFCFDTANPD----------------------------------------LLP 139
Query: 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KP +A+E+ + A ++P + IFFDDS RN+ GK LG+ TV V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 1e-32
Identities = 48/227 (21%), Positives = 79/227 (34%), Gaps = 54/227 (23%)
Query: 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKF-YGTTLAGLR 75
+LFDLD + ++K V + + +L + E EL + +K YG T++
Sbjct: 1 AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60
Query: 76 AIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLS 132
+ LKP P +R LL +L + + TN+ + A VL
Sbjct: 61 -----AQLLYKQLFYEALEKE-GLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVL- 113
Query: 133 RLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTP 192
LGL F+ +I +
Sbjct: 114 ELGLRALFDVVIDSSDV------------------------------------------- 130
Query: 193 VVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
+ KP + + Q K + P + +F DDS ++ K G+HTV V
Sbjct: 131 GLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 4e-21
Identities = 48/225 (21%), Positives = 82/225 (36%), Gaps = 52/225 (23%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAI 77
++FDLD T+ + + + E + L I EL + + LA L
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERL--GLDISAE---ELREAGGLPFDEALADL-LR 54
Query: 78 GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL 134
+ D D+ + L+P P + LL L ++ VI +N + R+L +L
Sbjct: 55 EHPIDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114
Query: 135 GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVV 194
GL D F+ + + + +
Sbjct: 115 GLLDLFDAVFTSDDVG-------------------------------------------A 131
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KP EA+E+V + + P + +F DDS +LE + G+ TV V
Sbjct: 132 RKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTVHV 176
|
Length = 176 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 6e-19
Identities = 59/263 (22%), Positives = 89/263 (33%), Gaps = 58/263 (22%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVS--------LYKFYGT 69
+LFDLD T+ S + V E + + E A + + YG
Sbjct: 7 ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66
Query: 70 TLAGLRAIGYQFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSLPIRK---VIFTNADKT 125
TL L + + D+ V L + L PD L +K I TN +
Sbjct: 67 TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGARP 126
Query: 126 HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185
H R L +LGL D F+ + S D G
Sbjct: 127 HQERKLRQLGLLDYFDAVFI-----SEDVG------------------------------ 151
Query: 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETG-KRLGLHTVWVGTSHR 244
V KP E FE + + P + +F DS+ N G + LG+ TVW+ +
Sbjct: 152 --------VAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGK 203
Query: 245 A--EGVDYALESIHNIKEALPEL 265
+ ++ I ++ E L L
Sbjct: 204 PLPDALEAPDYEISSLAELLDLL 226
|
Length = 229 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 3e-05
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 69/259 (26%)
Query: 19 LFDLDDTIYPLTSGLSKEVTKNIQEYML-QKLCIEEAKVPELCVSLYKFYGTTLAG---- 73
FDLDDT+ TSGL+++ +N E ++ L ++ + E + L K YG+
Sbjct: 6 FFDLDDTLID-TSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDY 64
Query: 74 -LRAIG--YQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSL---PIRKVIFTNADKTHA 127
+R + Y Y + +L + L+ P +R+ L+ L R I T+
Sbjct: 65 LIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQ 124
Query: 128 ARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLE 187
L RLG+ D F+ +I+ S ++G
Sbjct: 125 WEKLERLGVRDFFDAVIT-----SEEEG-------------------------------- 147
Query: 188 LPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLET----GKRLGLHTVWV---G 240
V KP + F K + P + + D L+ K LG+ TVW+
Sbjct: 148 ------VEKPHPKIFYAALKRLGVKPEEAVMVGD---RLDKDIKGAKNLGMKTVWINQGK 198
Query: 241 TSHRAEGV----DYALESI 255
+S + V DY + S+
Sbjct: 199 SSKMEDDVYPYPDYEISSL 217
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-05
Identities = 35/235 (14%), Positives = 62/235 (26%), Gaps = 64/235 (27%)
Query: 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL 74
++FDLD T+ + + E L + A V +L K L
Sbjct: 1 IKAVVFDLDGTLT--DGEPVVPEAEALLEA-AAALGV--AIVIAAGENLTKEGREELVRR 55
Query: 75 RAIGYQFDCDDFHSYVHGR-------------LPYMMLKPDPVLRNLLLSL---PIRKVI 118
+ + + L + P R L L I+ I
Sbjct: 56 LLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAI 115
Query: 119 FTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDY 178
T ++ A + LGL F+ ++S +
Sbjct: 116 LTGDNRLTANAIARLLGL---FDALVSADLYGLV-------------------------- 146
Query: 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233
V KP + FE + + P + + D + ++ K G
Sbjct: 147 --------------GVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 9e-05
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT-SHRAE 246
KP + ++P + + DS ++ + G+ T+ V T AE
Sbjct: 4 KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAE 55
|
Length = 74 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 1e-04
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 29/124 (23%)
Query: 117 VIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176
+ TN + +L LGL+D F+ +I+
Sbjct: 44 ALATNKSRREVLELLEELGLDDYFDPVITSNGA--------------------------- 76
Query: 177 DYCSRPNADLELPRTPVVC-KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235
P L L P KP + K+ ++P + + DS+ ++E K G
Sbjct: 77 -AIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGL 135
Query: 236 TVWV 239
V V
Sbjct: 136 GVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 3e-04
Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 50/180 (27%)
Query: 99 LKPDPVLRNLLLSLPIRKVIF---TNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155
LKP P + LL L R + +++ + A RVL+RLGL D F+ I+
Sbjct: 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIV----------- 133
Query: 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRK 215
A + R +P D + A E++ ++P +
Sbjct: 134 ------TADDVAR-----------GKPAPD-----------IYLLAAERL----GVDPEE 161
Query: 216 TIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEA----LPELWEVAGE 271
+ +DS ++ K G+ V V H +D + LP L E G
Sbjct: 162 CVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALLEARGI 221
|
Length = 221 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.002
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 28/136 (20%)
Query: 18 LLFDLDDTIYP-------LTSGLSKEVTKNIQEY--MLQKLCIEEAKVPELCVSLYKFYG 68
+LFD+D T+ + +E N + + + E + + +
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEALE--- 58
Query: 69 TTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAA 128
+ D +Y+ G +L L + I+ I +N
Sbjct: 59 -------ELQGHIGYDAEEAYIPG--------AADLLPRLKEA-GIKLGIISNGSLRAQK 102
Query: 129 RVLSRLGLEDCFERII 144
+L + GL D FE I+
Sbjct: 103 LLLRKHGLGDYFELIL 118
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 290 | |||
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 100.0 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.95 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.95 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.95 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.94 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.94 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.94 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.94 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.94 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.94 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.93 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.93 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.93 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.93 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.93 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.93 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.93 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.92 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.92 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.91 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.91 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.91 | |
| PLN02940 | 382 | riboflavin kinase | 99.91 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.91 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.9 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.89 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.89 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.89 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.88 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.88 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.87 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.86 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.86 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.86 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.85 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.84 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.84 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.82 | |
| PLN02811 | 220 | hydrolase | 99.81 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.81 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.79 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.79 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.78 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.78 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.77 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.77 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.76 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.75 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.74 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.74 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.74 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.73 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.73 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.71 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.7 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.69 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.68 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.68 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.66 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.64 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.63 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.62 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.62 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.62 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.62 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.6 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.6 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.6 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.58 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.57 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.54 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.54 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.54 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.53 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.51 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.5 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.49 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.47 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.47 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.47 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.46 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.45 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.45 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.44 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.44 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.43 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.41 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.4 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.39 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.31 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.3 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.3 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.29 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.27 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.27 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.26 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.26 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.25 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.25 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.24 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.24 | |
| PLN02887 | 580 | hydrolase family protein | 99.21 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.19 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.19 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.18 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.17 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.16 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.16 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.15 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.13 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.09 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.06 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 98.99 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.94 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.94 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.89 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.83 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 98.82 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.81 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.81 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.8 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.76 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.74 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.68 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.65 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.57 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.52 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.51 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.47 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.47 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.42 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.41 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.41 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.4 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.38 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.35 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.35 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.27 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.23 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.22 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.18 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.17 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.13 | |
| PLN02423 | 245 | phosphomannomutase | 98.11 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.1 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.07 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.06 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.81 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.78 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.63 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.63 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.61 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.6 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 97.59 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.56 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.52 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.52 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.5 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.41 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.34 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.26 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.26 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 97.2 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.17 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.1 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.03 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.99 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.97 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 96.93 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.66 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.66 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.62 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.6 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.57 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.53 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 96.46 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.44 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.43 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.36 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.04 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 95.88 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 95.74 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 95.63 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.51 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 95.48 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 95.31 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 95.29 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 95.16 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.11 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.1 | |
| PLN02151 | 354 | trehalose-phosphatase | 95.08 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.05 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.28 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 93.94 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.92 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 93.65 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 93.43 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 93.35 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.26 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 93.1 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 93.09 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 92.13 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 92.12 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 92.1 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 89.02 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 88.04 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 86.6 | |
| PLN02580 | 384 | trehalose-phosphatase | 84.82 | |
| PF06014 | 62 | DUF910: Bacterial protein of unknown function (DUF | 83.44 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 81.61 |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=237.31 Aligned_cols=232 Identities=59% Similarity=0.997 Sum_probs=219.7
Q ss_pred CCcccccccccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCC
Q 036723 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQ 80 (290)
Q Consensus 1 ~~~~~~~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (290)
|+++......+.+++++++||+|.||+..+..+.....+.|.+++.+++|++...+..++..+|+.||.+..++...++.
T Consensus 1 m~f~~~~~~~~~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~ 80 (244)
T KOG3109|consen 1 MTFEGDVFISSGPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYI 80 (244)
T ss_pred CCCCCcccccCCccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhccc
Confidence 77777777778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCCCc-EEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccc
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIR-KVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLV 159 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~-~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 159 (290)
.+.++|.++++++++++.++|-+.++++|-.|+.+ .+++||+.+.++.++++++|+.++|++|++.+..++.
T Consensus 81 ~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~------- 153 (244)
T KOG3109|consen 81 FDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI------- 153 (244)
T ss_pred CCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-------
Confidence 99999999999999999999999999999999977 9999999999999999999999999999999876641
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 160 DQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
..+++.||.+.+|+.+++..|++ |.+++||+||.++|..|++.|+.+++
T Consensus 154 ------------------------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvl 203 (244)
T KOG3109|consen 154 ------------------------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVL 203 (244)
T ss_pred ------------------------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEE
Confidence 23677999999999999999997 99999999999999999999999999
Q ss_pred ecCCCCCCCcceeecCHhHHHHHhHHHHHhh
Q 036723 239 VGTSHRAEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 239 v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
++..+...++++++.++.+..++++++|+..
T Consensus 204 v~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~ 234 (244)
T KOG3109|consen 204 VGREHKIKGVDYALEQIHNNKEALPELWEIL 234 (244)
T ss_pred EEeeecccchHHHHHHhhchhhhchHHhhcc
Confidence 9999988899999999999999999999986
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-27 Score=197.03 Aligned_cols=184 Identities=48% Similarity=0.864 Sum_probs=152.6
Q ss_pred cEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhcCC
Q 036723 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLP 95 (290)
Q Consensus 16 k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (290)
++|+||+||||+|+...+..++.+++.+++...+|++......+...++..+|.....+... ...+.+.+.+.+++...
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999998889999998888887788899887766556666666667655544332 34556677777766444
Q ss_pred CCCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 96 YMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 96 ~~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
...+.++||+.++|+.|+.+++++||++...+...++++|+..+|+.++++++.+...
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~---------------------- 137 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDY---------------------- 137 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCcc----------------------
Confidence 4567899999999999999999999999999999999999999999999998776310
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
...||+|++|+.+++++|++|+++++|||+..|+++|+++|+.+|++
T Consensus 138 -----------------~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 138 -----------------LLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred -----------------CCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 01499999999999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=202.03 Aligned_cols=199 Identities=17% Similarity=0.237 Sum_probs=148.0
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhh
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHG 92 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 92 (290)
|++|+|+||+||||+|+...+..++.++ ..+++...... ..+...+|.+.............+.+.+.+..
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~-----~~~~~~~~~~~----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 71 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHT-----LKTYYPNQYKR----EDVLPFIGPSLHDTFSKIDESKVEEMITTYRE 71 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHH-----HHHhCCCCCCH----HHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHH
Confidence 4689999999999999776666666633 33334322221 12333445554332221111112222222222
Q ss_pred c---CCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 93 R---LPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 93 ~---~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
. .....+.++||+.++|+.|+ ++++|+||+....+...++.+|+..+|+.++++++...
T Consensus 72 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------- 136 (214)
T PRK13288 72 FNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH--------------- 136 (214)
T ss_pred HHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC---------------
Confidence 1 11235678999999999996 78999999999999999999999999999999887765
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
+||+|+.++.++++++++|+++++|||+.+|+++|+++|+.++++.++..
T Consensus 137 ----------------------------~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~ 188 (214)
T PRK13288 137 ----------------------------AKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGR 188 (214)
T ss_pred ----------------------------CCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCH
Confidence 79999999999999999999999999999999999999999999988753
Q ss_pred ----CCCcceeecCHhHHHHHhH
Q 036723 245 ----AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 245 ----~~~ad~v~~sl~el~~~l~ 263 (290)
...++++++++.++.+++.
T Consensus 189 ~~l~~~~~~~~i~~~~~l~~~i~ 211 (214)
T PRK13288 189 EYLEQYKPDFMLDKMSDLLAIVG 211 (214)
T ss_pred HHHhhcCcCEEECCHHHHHHHHh
Confidence 3468999999999988664
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=200.23 Aligned_cols=200 Identities=21% Similarity=0.284 Sum_probs=153.3
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH--cCCC------CCH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA--IGYQ------FDC 83 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~------~~~ 83 (290)
+|++++|+||+||||+|+...+..++. ..++.++.+......+. ...|........ .+.. ...
T Consensus 1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~ig~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T COG0546 1 MMMIKAILFDLDGTLVDSAEDILRAFN-----AALAELGLPPLDEEEIR----QLIGLGLDELIERLLGEADEEAAAELV 71 (220)
T ss_pred CCCCCEEEEeCCCccccChHHHHHHHH-----HHHHHcCCCCCCHHHHH----HHhcCCHHHHHHHHhccccchhHHHHH
Confidence 367999999999999998888888877 57788888864433222 222333322111 1100 012
Q ss_pred HHHHHHHhhcCCCC-CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccc
Q 036723 84 DDFHSYVHGRLPYM-MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLV 159 (290)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 159 (290)
+.+.+.+....... ...++||+.++|..|+ ++++|+||.+...+...++++|+..+|+.+++.++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~-------- 143 (220)
T COG0546 72 ERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP-------- 143 (220)
T ss_pred HHHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC--------
Confidence 22222222222111 2588999999999986 78999999999999999999999999999999555443
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 160 DQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+|..+..+++++|++|++++||||+.+|+++|++||++++++
T Consensus 144 -----------------------------------~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v 188 (220)
T COG0546 144 -----------------------------------PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGV 188 (220)
T ss_pred -----------------------------------CCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEE
Confidence 799999999999999999889999999999999999999999999
Q ss_pred cCCCC------CCCcceeecCHhHHHHHhH
Q 036723 240 GTSHR------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 240 ~~~~~------~~~ad~v~~sl~el~~~l~ 263 (290)
.+++. ..++++++.++.||...+.
T Consensus 189 ~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 189 TWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred ECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 98762 5579999999999998764
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=202.56 Aligned_cols=194 Identities=18% Similarity=0.273 Sum_probs=142.4
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCC----CcccHHHHHHHHHHHHcccHHHHHH-c-CCCCC---
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCI----EEAKVPELCVSLYKFYGTTLAGLRA-I-GYQFD--- 82 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~----~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~--- 82 (290)
..++|+|+|||||||+|+...+..++.++++ ++|. +... ..+ .....|........ . .....
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~-----~~g~~~g~~~~~-~~~---~~~~~G~~~~~~~~~~~~~~~~~~~ 89 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQ-----EINFNGGVPITE-EFF---VENIAGKHNEDIALGLFPDDLERGL 89 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHH-----HhccccCCCCCH-HHH---HHHcCCCCHHHHHHHHcCcchhhHH
Confidence 3458999999999999987777777764443 3332 2211 110 11112333322211 1 00000
Q ss_pred --HHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 83 --CDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 83 --~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
...+...+.+.. ...+.++||+.++|+.|+ ++++|+||+.+..+...++++|+..+|+.++++++...
T Consensus 90 ~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~------ 162 (248)
T PLN02770 90 KFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH------ 162 (248)
T ss_pred HHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC------
Confidence 011222222222 245788999999999885 78999999999999999999999999999999998765
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+||+|+.|..+++++|++|++|++|||+.+|+++|+++|+.+|
T Consensus 163 -------------------------------------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 163 -------------------------------------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred -------------------------------------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 7999999999999999999999999999999999999999999
Q ss_pred EecCCCC-----CCCcceeecCHhHH
Q 036723 238 WVGTSHR-----AEGVDYALESIHNI 258 (290)
Q Consensus 238 ~v~~~~~-----~~~ad~v~~sl~el 258 (290)
++.++.. ..+|+++++++.|+
T Consensus 206 ~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 206 GLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred EEeCCCCHHHHhhcCCCEEeccchhh
Confidence 9987643 34789999999983
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-26 Score=200.86 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=144.8
Q ss_pred CCCccEEEEecCCCcccCCCCh-HHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH--------------H-HH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGL-SKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA--------------G-LR 75 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~-~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~--------------~-~~ 75 (290)
||++|+|+||+||||+|+.... ..++.+ .+..+|.+... . .+...+|.... . ..
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-E----EARGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 4669999999999999965432 344442 34455654322 1 11122222210 0 01
Q ss_pred HcCCCCCHHHH-------HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc-eeEE
Q 036723 76 AIGYQFDCDDF-------HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF-ERII 144 (290)
Q Consensus 76 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~ 144 (290)
..+.....+.+ .+.+.+.. ...+.++||+.++|+.|+ ++++|+||..+..+..+++.+++..+| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 12222222222 12222222 245788999999999995 789999999999999999999888774 8888
Q ss_pred eecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCc
Q 036723 145 SFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSI 223 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~ 223 (290)
++++... .||+|+.|..+++++|+. +++|++|||+.
T Consensus 150 ~~~~~~~-------------------------------------------~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~ 186 (267)
T PRK13478 150 TTDDVPA-------------------------------------------GRPYPWMALKNAIELGVYDVAACVKVDDTV 186 (267)
T ss_pred cCCcCCC-------------------------------------------CCCChHHHHHHHHHcCCCCCcceEEEcCcH
Confidence 8887664 799999999999999996 69999999999
Q ss_pred cchHHHHhcCCeEEEecCCCC-----------------------------CCCcceeecCHhHHHHHhHHHHH
Q 036723 224 RNLETGKRLGLHTVWVGTSHR-----------------------------AEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 224 ~Di~~a~~aGi~~i~v~~~~~-----------------------------~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
+|+++|+++|+.+|++.+++. ..+++++++++.+|.+++..+.-
T Consensus 187 ~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 187 PGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 999999999999999987643 45799999999999998865443
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=199.34 Aligned_cols=198 Identities=19% Similarity=0.162 Sum_probs=146.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH-cCCCCCH-------H
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA-IGYQFDC-------D 84 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-------~ 84 (290)
.++|+|+||+||||+|+...+..++. ....+.|.+......+ ....|........ ....... +
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVN-----AMLAARGRAPITLAQL----RPVVSKGARAMLAVAFPELDAAARDALIP 80 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHH-----HHHHHCCCCCCCHHHH----HHHhhhHHHHHHHHHhccCChHHHHHHHH
Confidence 35799999999999997766666665 3556677654332221 2222332222211 1111111 1
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccc
Q 036723 85 DFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQ 161 (290)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 161 (290)
.+.+.+..... ....++||+.++|+.|+ ++++++||+........++++++..+|+.+++.+....
T Consensus 81 ~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 149 (229)
T PRK13226 81 EFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE---------- 149 (229)
T ss_pred HHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC----------
Confidence 22333332221 34688999999999985 67899999999999999999999999999888876554
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 162 DASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.+
T Consensus 150 ---------------------------------~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 150 ---------------------------------RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred ---------------------------------CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 79999999999999999999999999999999999999999999977
Q ss_pred CCC-------CCCcceeecCHhHHHHHhH
Q 036723 242 SHR-------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 242 ~~~-------~~~ad~v~~sl~el~~~l~ 263 (290)
+.. ..+++++++++.+|.+.+.
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWNPAT 225 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHHHhc
Confidence 653 2469999999999988664
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=194.18 Aligned_cols=195 Identities=16% Similarity=0.192 Sum_probs=145.0
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHH-HHcccHHHH-HHcC--CCCCH---HH--
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYK-FYGTTLAGL-RAIG--YQFDC---DD-- 85 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~g~~~~~~-~~~~--~~~~~---~~-- 85 (290)
+|+|+||+||||+|+...+..++.+ ...+.|.+..... ..+ ..|...... .... ..... +.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEE-----VQSAWMGQSKIEAIRALLALDGADEAEAQAAF 70 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHH-----HHHhhcCCCHHHHHHHHHhccCCCHHHHHHHH
Confidence 5899999999999988877777763 4445666543321 111 223332221 1110 11111 11
Q ss_pred --HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC--CcceeEEeecccCCCCCCccc
Q 036723 86 --FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE--DCFERIISFETLNSTDKGTVL 158 (290)
Q Consensus 86 --~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~ 158 (290)
+.+.+.+........++||+.++|+.|+ ++++|+||+........++++|+. .+|+.++++++...
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~------- 143 (220)
T TIGR03351 71 ADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA------- 143 (220)
T ss_pred HHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC-------
Confidence 2222222222235689999999999995 789999999999999999999998 99999999987765
Q ss_pred cccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhcCCeE-
Q 036723 159 VDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRLGLHT- 236 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~aGi~~- 236 (290)
+||+|++|+.+++++|+. |++|++|||+.+|+++|+++|+.+
T Consensus 144 ------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~ 187 (220)
T TIGR03351 144 ------------------------------------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAV 187 (220)
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeE
Confidence 799999999999999997 799999999999999999999999
Q ss_pred EEecCCCC------CCCcceeecCHhHHHHHh
Q 036723 237 VWVGTSHR------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 237 i~v~~~~~------~~~ad~v~~sl~el~~~l 262 (290)
+++.++.. ..+++++++++.+|.+++
T Consensus 188 i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 188 VGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred EEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 88877643 456899999999987754
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-26 Score=198.51 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=110.5
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc-eeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF-ERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
....++||+.++|+.|+ ++++|+||+....+..+++++|+..+| +.+++++++..
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~--------------------- 154 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA--------------------- 154 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC---------------------
Confidence 45789999999999995 789999999999999999999999986 88999887765
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhcCCeEEEecCCCC-------
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR------- 244 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~------- 244 (290)
+||+|+.|..+++++|+. |++|++|||+.+|+++|+++|+.+|++.++..
T Consensus 155 ----------------------~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~ 212 (253)
T TIGR01422 155 ----------------------GRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEE 212 (253)
T ss_pred ----------------------CCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHH
Confidence 799999999999999995 99999999999999999999999999987652
Q ss_pred ----------------------CCCcceeecCHhHHHHHh
Q 036723 245 ----------------------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 ----------------------~~~ad~v~~sl~el~~~l 262 (290)
..+|+++++++.||.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 213 EYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 357999999999998754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-26 Score=195.33 Aligned_cols=195 Identities=17% Similarity=0.248 Sum_probs=141.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHH-HcccHHHH-----HHcCCCCCHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKF-YGTTLAGL-----RAIGYQFDCDDF 86 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~-~g~~~~~~-----~~~~~~~~~~~~ 86 (290)
+++|+|+||+||||+|+...+..++.+ .+...|.+... .. +... .|...... ...+...+.+.+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSL-EE----VFKRFKGVKLYEIIDIISKEHGVTLAKAEL 71 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCH-HH----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 458999999999999976666665552 44556765332 11 1112 22222111 223334444555
Q ss_pred HHHHhhcC---CCCCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcce-eEEeecccCCCCCCccccccc
Q 036723 87 HSYVHGRL---PYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFE-RIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 87 ~~~~~~~~---~~~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+...+ ....+.++||+.++|+.|+++++|+||+....+...++++++..+|+ .++++++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~----------- 140 (221)
T PRK10563 72 EPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR----------- 140 (221)
T ss_pred HHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC-----------
Confidence 44433221 12457889999999999999999999999999999999999999996 5777776664
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+++|+++|++++++..+
T Consensus 141 --------------------------------~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~ 188 (221)
T PRK10563 141 --------------------------------WKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCAD 188 (221)
T ss_pred --------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCC
Confidence 799999999999999999999999999999999999999999988643
Q ss_pred CC----CCCcceeecCHhHHHH
Q 036723 243 HR----AEGVDYALESIHNIKE 260 (290)
Q Consensus 243 ~~----~~~ad~v~~sl~el~~ 260 (290)
.. ...++.+++++.||.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~ 210 (221)
T PRK10563 189 PHNKPIDHPLVTTFTDLAQLPE 210 (221)
T ss_pred CCCcchhhhhhHHHHHHHHHHH
Confidence 22 2234455666666664
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-26 Score=195.62 Aligned_cols=196 Identities=16% Similarity=0.188 Sum_probs=145.7
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-----HcCC-CCCHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-----AIGY-QFDCDD 85 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~~~ 85 (290)
++++|+|+||+||||+|+...+..++. .++.++|.+...... +...+|....... .... ......
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~-----~~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 74 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAEL-----DVMASLGVDISRREE----LPDTLGLRIDQVVDLWYARQPWNGPSRQE 74 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHH-----HHHHHCCCCCCHHHH----HHHhhCCCHHHHHHHHHHhcCCCCCCHHH
Confidence 446999999999999997665655554 355667765433111 2222333222111 1111 112222
Q ss_pred H----HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccc
Q 036723 86 F----HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVL 158 (290)
Q Consensus 86 ~----~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 158 (290)
+ .+.+.+.+ .....++||+.++|+.|+ ++++++||+........++++++..+|+.+++++..+.
T Consensus 75 ~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------- 146 (222)
T PRK10826 75 VVQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY------- 146 (222)
T ss_pred HHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC-------
Confidence 2 22222222 245789999999999885 78999999999999999999999999999999887664
Q ss_pred cccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 159 VDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
+||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+++|+
T Consensus 147 ------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~ 190 (222)
T PRK10826 147 ------------------------------------SKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190 (222)
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEE
Confidence 79999999999999999999999999999999999999999999
Q ss_pred ecCCCC-----CCCcceeecCHhHHHH
Q 036723 239 VGTSHR-----AEGVDYALESIHNIKE 260 (290)
Q Consensus 239 v~~~~~-----~~~ad~v~~sl~el~~ 260 (290)
+.++.. ...+++++.++.||..
T Consensus 191 v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 191 VPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred ecCCccCchhhhhhhheeccCHHHHhh
Confidence 987653 2368999999999865
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=192.35 Aligned_cols=198 Identities=24% Similarity=0.369 Sum_probs=139.3
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCccc--HHHHHHHHHHHHcccH-----HHHHHcCCCCCHHHH-
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAK--VPELCVSLYKFYGTTL-----AGLRAIGYQFDCDDF- 86 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~--~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~- 86 (290)
+++|+||+||||+++...+..++....+. ....|.+... ........++.++... ......+........
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 78999999999999877776655433322 3344444221 1111112222222111 111111111111111
Q ss_pred --HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccc
Q 036723 87 --HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQ 161 (290)
Q Consensus 87 --~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 161 (290)
...+... ....+.++||+.++|+.|+ ++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 148 (221)
T TIGR02253 80 AFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV---------- 148 (221)
T ss_pred HHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------
Confidence 1111111 1234688999999999986 77999999999999999999999999999999988775
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEec
Q 036723 162 DASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVG 240 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~ 240 (290)
+||+|+.|+.+++++|++++++++|||+. +|+.+|+++|+.+|++.
T Consensus 149 ---------------------------------~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 149 ---------------------------------EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred ---------------------------------CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 79999999999999999999999999998 89999999999999998
Q ss_pred CCCC-------CCCcceeecCHhHH
Q 036723 241 TSHR-------AEGVDYALESIHNI 258 (290)
Q Consensus 241 ~~~~-------~~~ad~v~~sl~el 258 (290)
++.. ...++++++++.||
T Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 196 QGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred CCCCcccccccccCCCeeeCcHHhh
Confidence 7653 23578888888776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-25 Score=196.54 Aligned_cols=204 Identities=17% Similarity=0.217 Sum_probs=150.9
Q ss_pred cccccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCCCC-CHH
Q 036723 7 NKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGYQF-DCD 84 (290)
Q Consensus 7 ~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~-~~~ 84 (290)
+++.+..++|+|+||+||||+|+...+...+. ...+++|.+...... +.+..|.....+ ...+... ..+
T Consensus 54 ~~~~~~~~~k~vIFDlDGTLiDS~~~~~~a~~-----~~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~ 124 (273)
T PRK13225 54 FPQSYPQTLQAIIFDFDGTLVDSLPTVVAIAN-----AHAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQA 124 (273)
T ss_pred hhhhhhhhcCEEEECCcCccccCHHHHHHHHH-----HHHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHH
Confidence 55566667999999999999997777766665 355667775433211 111123222222 2222110 111
Q ss_pred H----HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 85 D----FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 85 ~----~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
. +.+.+... ...+.++||+.++|+.|+ ++++|+||+....+...++++|+..+|+.+++.+..
T Consensus 125 ~~~~~~~~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~-------- 194 (273)
T PRK13225 125 RLLQRVQRQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI-------- 194 (273)
T ss_pred HHHHHHHHHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC--------
Confidence 1 22222222 245788999999999996 789999999999999999999999999988776532
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+++++.++.++++++++|++|++|||+.+|+++|+++|+.+|
T Consensus 195 --------------------------------------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 195 --------------------------------------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred --------------------------------------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 345689999999999999999999999999999999999999
Q ss_pred EecCCCC------CCCcceeecCHhHHHHHhHHHHH
Q 036723 238 WVGTSHR------AEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 238 ~v~~~~~------~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
++.++.. ..+|+++++++.+|.+++.+++.
T Consensus 237 ~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 237 AVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred EEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 9988753 34799999999999999888765
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=192.50 Aligned_cols=192 Identities=19% Similarity=0.202 Sum_probs=139.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-HHHcCCCCCHHHHHHHHh
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-LRAIGYQFDCDDFHSYVH 91 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 91 (290)
|++|+|+||+||||+|+...+..++. ..+.++|++.... .. ...|..... +.........+.+.+.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~---~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWS-----NWADRHGIAPDEV---LN---FIHGKQAITSLRHFMAGASEAEIQAEFT 69 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHH-----HHHHHcCCCHHHH---HH---HHcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 46899999999999997777777666 3555667653211 11 112332221 111111112222222221
Q ss_pred h-----cCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccc
Q 036723 92 G-----RLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 92 ~-----~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
. ......+.++||+.++|+.|+ ++++++||+........++..++ .+|+.+++.++...
T Consensus 70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------ 136 (218)
T PRK11587 70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------ 136 (218)
T ss_pred HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC------------
Confidence 1 111245788999999999985 78999999988888888888888 45788888776654
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.||+|+.|..+++++|++|++|++|||+.+|+++|+++|+.+|++.++.
T Consensus 137 -------------------------------~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 137 -------------------------------GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred -------------------------------CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCC
Confidence 6999999999999999999999999999999999999999999998765
Q ss_pred C---CCCcceeecCHhHHH
Q 036723 244 R---AEGVDYALESIHNIK 259 (290)
Q Consensus 244 ~---~~~ad~v~~sl~el~ 259 (290)
. ...++++++++.||.
T Consensus 186 ~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 186 DTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred chhhhccCCEEecchhhee
Confidence 3 346899999998875
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=190.41 Aligned_cols=191 Identities=20% Similarity=0.277 Sum_probs=141.6
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHH---HH---
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCD---DF--- 86 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~---~~--- 86 (290)
|+||+||||+|+...+..++. ....+.|.+...... +....|...... ...+...+.+ .+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVN-----MALAALGLPPATLAR----VIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHH-----HHHHHCCCCCCCHHH----HHHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 699999999997666665555 355567765433222 222234332211 1112122221 12
Q ss_pred -HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 87 -HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 87 -~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+.+.. .....++||+.++|+.|+ ++++|+||+....+...++++|+..+|+.++++++...
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------- 139 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC-----------
Confidence 22222222 135688999999999986 78999999999999999999999999999999887664
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+.++++.++
T Consensus 140 --------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g 187 (213)
T TIGR01449 140 --------------------------------RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYG 187 (213)
T ss_pred --------------------------------CCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccC
Confidence 799999999999999999999999999999999999999999999776
Q ss_pred CC------CCCcceeecCHhHHHHH
Q 036723 243 HR------AEGVDYALESIHNIKEA 261 (290)
Q Consensus 243 ~~------~~~ad~v~~sl~el~~~ 261 (290)
.. ..+++++++++.+|..+
T Consensus 188 ~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 188 YRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CCCCcchhhcCCCeEeCCHHHHHhh
Confidence 43 34689999999998764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-25 Score=187.66 Aligned_cols=193 Identities=18% Similarity=0.266 Sum_probs=143.1
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCCCCC-HHHHHHHHhhcCC
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGYQFD-CDDFHSYVHGRLP 95 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~-~~~~~~~~~~~~~ 95 (290)
|+||+||||+|+...+..++.++++ +..|.+..... .+.+..|.....+ ...+.... ...+...... .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYR----EVVGDGPAPFE----EYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR-L- 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHH----HhcCCCCCCHH----HHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH-h-
Confidence 6899999999977766666663332 22354332221 2223334443322 22232111 1112121221 1
Q ss_pred CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 96 YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 96 ~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
...+.++||+.++|+.|+ ++++++||+....+...++++|+..+|+.++++++...
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------------- 129 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------------- 129 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC---------------------
Confidence 246789999999999985 78999999999999999999999999999999887654
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC------CC
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR------AE 246 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~------~~ 246 (290)
+||+|+.|+.+++++|+++++|++|||+.+|+++|+++|++++++.++.. ..
T Consensus 130 ----------------------~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~ 187 (205)
T TIGR01454 130 ----------------------PKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAA 187 (205)
T ss_pred ----------------------CCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhc
Confidence 79999999999999999999999999999999999999999999987753 44
Q ss_pred CcceeecCHhHHHHHhH
Q 036723 247 GVDYALESIHNIKEALP 263 (290)
Q Consensus 247 ~ad~v~~sl~el~~~l~ 263 (290)
+++++++++.+|.++++
T Consensus 188 ~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 188 RPDFLLRKPQSLLALCR 204 (205)
T ss_pred CCCeeeCCHHHHHHHhh
Confidence 68999999999987654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=194.90 Aligned_cols=205 Identities=14% Similarity=0.127 Sum_probs=150.1
Q ss_pred CCccEEEEecCCCcccCCCChH-HHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-Hc-CCCCCHH---HH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLS-KEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-AI-GYQFDCD---DF 86 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~-~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~---~~ 86 (290)
..+|+|||||||||+|+...++ .++. .+..++|++..... ......|....... .. ....+.+ .+
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~-----~~~~~~G~~~~~~e----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l 92 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWR-----ALAEEEGKRPPPAF----LLKRAEGMKNEQAISEVLCWSRDFLQMKRL 92 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHH-----HHHHHcCCCCCHHH----HHHHhcCCCHHHHHHHHhccCCCHHHHHHH
Confidence 4589999999999999755544 4555 35566777644321 11123344333221 11 1111111 11
Q ss_pred HHHHh---hcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 87 HSYVH---GRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 87 ~~~~~---~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
...+. .........++||+.++|+.|+ ++++|+||+....+...++++|+..+|+.++++++...
T Consensus 93 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~--------- 163 (260)
T PLN03243 93 AIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR--------- 163 (260)
T ss_pred HHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC---------
Confidence 11111 1111234678999999999986 78999999999999999999999999999999988765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.
T Consensus 164 ----------------------------------~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 164 ----------------------------------GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred ----------------------------------CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEe
Confidence 7999999999999999999999999999999999999999999986
Q ss_pred CCCC---CCCcceeecCHhHHHHHhHHHHHhh
Q 036723 241 TSHR---AEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 241 ~~~~---~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
+... ...+++++.++.+|......-|...
T Consensus 210 g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~ 241 (260)
T PLN03243 210 GKHPVYELSAGDLVVRRLDDLSVVDLKNLSDL 241 (260)
T ss_pred cCCchhhhccCCEEeCCHHHHHHHHHhhhhcc
Confidence 3321 3468999999999988777666655
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=185.85 Aligned_cols=122 Identities=21% Similarity=0.360 Sum_probs=108.3
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.+.++||+.++|+.|+ ++++++||+........++++|+..+|+.++++++++.
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------ 148 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV------------------------ 148 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC------------------------
Confidence 4678999999999996 78999999999999999999999999999999988775
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHhcCCeEEEecCCC-C---CCCcc
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSI-RNLETGKRLGLHTVWVGTSH-R---AEGVD 249 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~-~---~~~ad 249 (290)
.||+|++|+.+++++|+. +++|++|||+. +|+++|+++|+.++++.++. . ...++
T Consensus 149 -------------------~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~ 209 (224)
T PRK09449 149 -------------------AKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPT 209 (224)
T ss_pred -------------------CCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCe
Confidence 799999999999999985 58999999998 79999999999999997532 1 23589
Q ss_pred eeecCHhHHHHHh
Q 036723 250 YALESIHNIKEAL 262 (290)
Q Consensus 250 ~v~~sl~el~~~l 262 (290)
++++++.||.+++
T Consensus 210 ~~i~~~~el~~~l 222 (224)
T PRK09449 210 YQVSSLSELEQLL 222 (224)
T ss_pred EEECCHHHHHHHH
Confidence 9999999998865
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=186.59 Aligned_cols=202 Identities=20% Similarity=0.216 Sum_probs=140.5
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHccc-----HHHHHHcCCCCCHHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTT-----LAGLRAIGYQFDCDDFHS 88 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~ 88 (290)
.+|+|||||||||+|.... ...+.+...+.+....|.+...........+...+.. ...+... .......+
T Consensus 9 ~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 84 (224)
T PRK14988 9 DVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSER-LGLDICAM-- 84 (224)
T ss_pred cCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHH-hCCCHHHH--
Confidence 4789999999999994311 2233333334455677776443322111111111100 0111100 00011111
Q ss_pred HHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 89 YVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 89 ~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
. ... ...+.++||+.++|+.|+ ++++++||+.+..+...++++|+..+|+.++++++++.
T Consensus 85 -~-~~~-~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~-------------- 147 (224)
T PRK14988 85 -T-TEQ-GPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY-------------- 147 (224)
T ss_pred -H-HHH-hccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC--------------
Confidence 1 111 145788999999999996 68999999999999999999999999999999988775
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE-EEecCCCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT-VWVGTSHR 244 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~-i~v~~~~~ 244 (290)
+||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+.+ +++.++..
T Consensus 148 -----------------------------~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~ 198 (224)
T PRK14988 148 -----------------------------PKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDS 198 (224)
T ss_pred -----------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence 799999999999999999999999999999999999999984 66766654
Q ss_pred --CCCcceeecCHhHHHHHhHHH
Q 036723 245 --AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 245 --~~~ad~v~~sl~el~~~l~~~ 265 (290)
...+..+..+++++.+.+..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 199 GIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred CccchhccCCCcHHHHHHHhhhh
Confidence 345556678888888877654
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=187.61 Aligned_cols=199 Identities=20% Similarity=0.239 Sum_probs=146.9
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHH--
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDD-- 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~-- 85 (290)
+++++|+||+||||+++...+..++. . +...++.+......+. ..+|.....+ ...+.....+.
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~----~-~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVN----A-ALAALGLPPAGEERVR----TWVGNGADVLVERALTWAGREPDEELLE 74 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHH----H-HHHHCCCCCCCHHHHH----HHhCccHHHHHHHHHhhccCCccHHHHH
Confidence 56999999999999996555555444 2 4556777654433222 1223222111 11111222222
Q ss_pred -----HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 86 -----FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 86 -----~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
+.+.+..... ....+.||+.++|+.|+ ++++++||+.......+++++++..+|+.+++.+....
T Consensus 75 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------ 147 (226)
T PRK13222 75 KLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN------ 147 (226)
T ss_pred HHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC------
Confidence 2222322221 34688999999999886 77999999999999999999999999999988876654
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
.||+|++++.+++++++++++|++|||+.+|+++|+++|+.++
T Consensus 148 -------------------------------------~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i 190 (226)
T PRK13222 148 -------------------------------------KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSV 190 (226)
T ss_pred -------------------------------------CCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEE
Confidence 7999999999999999999999999999999999999999999
Q ss_pred EecCCCC------CCCcceeecCHhHHHHHhHH
Q 036723 238 WVGTSHR------AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 238 ~v~~~~~------~~~ad~v~~sl~el~~~l~~ 264 (290)
++.++.. ...|+++++++.+|..++.+
T Consensus 191 ~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 191 GVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred EECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 9987653 34688999999999987654
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-24 Score=184.40 Aligned_cols=199 Identities=23% Similarity=0.306 Sum_probs=142.8
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHH--HH---HHHHHHHH--c-ccHH---------HHHHc
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVP--EL---CVSLYKFY--G-TTLA---------GLRAI 77 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~--~~---~~~~~~~~--g-~~~~---------~~~~~ 77 (290)
+|+|+||+||||+|+......++.+ +....|.+..... .. ....+..+ + .... .....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999977766655552 3445565432111 11 01111221 1 1111 11112
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 78 GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
+.....+.+...+..... ....++||+.++|+.|+ ++++++||+....+...++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~---- 150 (224)
T TIGR02254 76 NTEADEALLNQKYLRFLE-EGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI---- 150 (224)
T ss_pred CCCCcHHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC----
Confidence 222222223333332221 34678999999999887 78999999999999999999999999999999987765
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc-CCCCCcEEEEcCCc-cchHHHHhcC
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA-NINPRKTIFFDDSI-RNLETGKRLG 233 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~-~~~~~e~i~iGDs~-~Di~~a~~aG 233 (290)
.||+|++|+.+++++ |++|+++++|||+. +|+++|+++|
T Consensus 151 ---------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G 191 (224)
T TIGR02254 151 ---------------------------------------QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAG 191 (224)
T ss_pred ---------------------------------------CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCC
Confidence 799999999999999 99999999999998 7999999999
Q ss_pred CeEEEecCCCC----CCCcceeecCHhHHHHHh
Q 036723 234 LHTVWVGTSHR----AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 234 i~~i~v~~~~~----~~~ad~v~~sl~el~~~l 262 (290)
++++++.++.. ...+++++.++.||.++|
T Consensus 192 ~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 192 LDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 99999976532 346789999999998754
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-24 Score=196.34 Aligned_cols=202 Identities=14% Similarity=0.184 Sum_probs=149.1
Q ss_pred CccEEEEecCCCcccCCCChHH-HHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-Hc-CCCCCHH---HH-
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSK-EVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-AI-GYQFDCD---DF- 86 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~---~~- 86 (290)
..++|||||||||+|+...++. ++. .+..+.|.+..... .+....|....... .. ....+.. .+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~-----~l~~e~G~~~~~~e----~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~ 200 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWL-----TLAQEEGKSPPPAF----ILRRVEGMKNEQAISEVLCWSRDPAELRRMA 200 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHH-----HHHHHcCCCCCHHH----HHHHhcCCCHHHHHHHHhhccCCHHHHHHHH
Confidence 6899999999999996664543 444 35566777654321 12233454433222 11 1111121 12
Q ss_pred ---HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 87 ---HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 87 ---~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
.+.+.+.. .....++||+.++|+.|+ ++++|+||+.+..+...++++|+..+|+.+++++++..
T Consensus 201 ~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~--------- 270 (381)
T PLN02575 201 TRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR--------- 270 (381)
T ss_pred HHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC---------
Confidence 22222222 134678999999999995 78999999999999999999999999999999998765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||+|++|..+++++|++|++|++|||+..|+++|+++|+.+|++.
T Consensus 271 ----------------------------------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~ 316 (381)
T PLN02575 271 ----------------------------------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA 316 (381)
T ss_pred ----------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 7999999999999999999999999999999999999999999998
Q ss_pred CCCC---CCCcceeecCHhHHH-HHhHHHHHh
Q 036723 241 TSHR---AEGVDYALESIHNIK-EALPELWEV 268 (290)
Q Consensus 241 ~~~~---~~~ad~v~~sl~el~-~~l~~~~~~ 268 (290)
+++. ...++++++++.||. ..+..+...
T Consensus 317 ~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~ 348 (381)
T PLN02575 317 SKHPIYELGAADLVVRRLDELSIVDLKNLADI 348 (381)
T ss_pred CCCChhHhcCCCEEECCHHHHHHHHHhhhhhc
Confidence 7543 335899999999994 334444433
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=189.70 Aligned_cols=199 Identities=21% Similarity=0.259 Sum_probs=146.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH--cC-----CCCCH--
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA--IG-----YQFDC-- 83 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~-----~~~~~-- 83 (290)
..+|+|+|||||||+|+...+..++. .+....|.+......+ ....|.....+.. +. ...+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 81 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVD-----RMLLELGRPPAGLEAV----RHWVGNGAPVLVRRALAGSIDHDGVDDEL 81 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHH-----HHHHHcCCCCCCHHHH----HHHhChhHHHHHHHHhcccccccCCCHHH
Confidence 35899999999999997777666655 3666777765433221 2222332221111 00 11121
Q ss_pred -HHHHHHHhhcC--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 84 -DDFHSYVHGRL--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 84 -~~~~~~~~~~~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
+.+.+.+.+.. ......++||+.++|+.|+ ++++++||++...+...++++++..+|+.++++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~------ 155 (272)
T PRK13223 82 AEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ------ 155 (272)
T ss_pred HHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC------
Confidence 12222222211 1134678999999999985 78999999999999999999999999999999887654
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
.||+|+.|+.+++++|+++++|++|||+.+|+++|+++|+.++
T Consensus 156 -------------------------------------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i 198 (272)
T PRK13223 156 -------------------------------------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCV 198 (272)
T ss_pred -------------------------------------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 6999999999999999999999999999999999999999999
Q ss_pred EecCCCC------CCCcceeecCHhHHHHHhH
Q 036723 238 WVGTSHR------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 238 ~v~~~~~------~~~ad~v~~sl~el~~~l~ 263 (290)
++.++.. ...++++++++.+|.+++.
T Consensus 199 ~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 199 ALSYGYNHGRPIAEESPALVIDDLRALLPGCA 230 (272)
T ss_pred EEecCCCCchhhhhcCCCEEECCHHHHHHHHh
Confidence 9987642 3469999999999986544
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-24 Score=177.98 Aligned_cols=174 Identities=18% Similarity=0.319 Sum_probs=127.0
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDDF 86 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~ 86 (290)
|.++|+|+||+||||+|+...+..++.+ ...+.|.+... . .+....|...... ...+...+.+.+
T Consensus 2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (188)
T PRK10725 2 YDRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDE-Q----AMVALNGSPTWRIAQAIIELNQADLDPHAL 71 (188)
T ss_pred CCcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 4458999999999999977766666663 44456665322 1 1222223322111 112222333333
Q ss_pred HHH----HhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 87 HSY----VHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 87 ~~~----~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
... +.... ...+.++|+ .++|..|+ ++++|+||+....+...++++|+..+|+.+++++++..
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--------- 140 (188)
T PRK10725 72 AREKTEAVKSML-LDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH--------- 140 (188)
T ss_pred HHHHHHHHHHHH-hccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC---------
Confidence 221 22221 244567786 57888876 78999999999999999999999999999999998775
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+++|++.
T Consensus 141 ----------------------------------~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 141 ----------------------------------HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred ----------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 7999999999999999999999999999999999999999999875
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-24 Score=184.82 Aligned_cols=124 Identities=28% Similarity=0.500 Sum_probs=113.1
Q ss_pred CCCCChhHHHHHHcCCCc--EEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLPIR--KVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~~~--~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.++++|++.+.|+.++.+ ++++||+....+..++.++|+.++||.++++++++.
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~------------------------ 152 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV------------------------ 152 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc------------------------
Confidence 478899999999999844 999999999999999999999999999999998885
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCCC-----CCcc
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHRA-----EGVD 249 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~~-----~~ad 249 (290)
.||+|.+|+.+++++|++|+++++|||+. |||.+|+++||.+||+..+... ..++
T Consensus 153 -------------------~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~ 213 (229)
T COG1011 153 -------------------AKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPD 213 (229)
T ss_pred -------------------CCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCc
Confidence 79999999999999999999999999999 7889999999999999886532 4688
Q ss_pred eeecCHhHHHHHhHH
Q 036723 250 YALESIHNIKEALPE 264 (290)
Q Consensus 250 ~v~~sl~el~~~l~~ 264 (290)
+.+.++.++.+.+..
T Consensus 214 ~~i~~l~~l~~~~~~ 228 (229)
T COG1011 214 YEISSLAELLDLLER 228 (229)
T ss_pred eEEcCHHHHHHHHhh
Confidence 999999999987753
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=181.85 Aligned_cols=178 Identities=24% Similarity=0.353 Sum_probs=134.6
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH----HHHHc--CCC-CCHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA----GLRAI--GYQ-FDCDDF 86 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~----~~~~~--~~~-~~~~~~ 86 (290)
++|+|||||||||+|+...+..++. .++.++|++... ......+|.... .+... +.. .+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~-----~~~~~~g~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWL-----EALKEYGIEISD-----EEIRELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHH-----HHHHHcCCCCCH-----HHHHHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 4799999999999997666666666 366668877654 122233332211 11111 111 122222
Q ss_pred HHHHh--hcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccc
Q 036723 87 HSYVH--GRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQ 161 (290)
Q Consensus 87 ~~~~~--~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 161 (290)
..... .......+.+.||+.++|+.|+ +.+++.|+.++..+...+.++|+..+|+.+++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~---------- 140 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR---------- 140 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence 22111 1122356899999999999998 77899999999999999999999999999999988776
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 162 DASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+||+|+.|..+++++|++|++|++|+||.+++++|++|||.++++..
T Consensus 141 ---------------------------------~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 141 ---------------------------------GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred ---------------------------------CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecC
Confidence 79999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 036723 242 SHR 244 (290)
Q Consensus 242 ~~~ 244 (290)
++.
T Consensus 188 ~~~ 190 (221)
T COG0637 188 GHD 190 (221)
T ss_pred CCC
Confidence 543
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=194.53 Aligned_cols=194 Identities=20% Similarity=0.295 Sum_probs=145.9
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-----HHHcCCCCCHHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-----LRAIGYQFDCDDFHS 88 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~ 88 (290)
.+|+|+||+||||+|+...+..++. .+..++|.+.... .+....|..... +...+.....+.+.+
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~-----~~~~~~G~~~~~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLK-----AFLVKYGKQWDGR-----EAQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHH-----HHHHHcCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 4899999999999997776666665 2455667654321 122333433221 111233333343332
Q ss_pred HHhhcC--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHH-hcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 89 YVHGRL--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLS-RLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 89 ~~~~~~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~-~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+.+ .+..+.++||+.++|+.|+ ++++|+||+.+..+...++ .+++..+|+.+++++++..
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~----------- 148 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK----------- 148 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence 222111 1245788999999999996 7899999999999998887 7899999999999998765
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++|+.+|++.++
T Consensus 149 --------------------------------~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g 196 (382)
T PLN02940 149 --------------------------------GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSI 196 (382)
T ss_pred --------------------------------CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 799999999999999999999999999999999999999999999876
Q ss_pred CC----CCCcceeecCHhHHHH
Q 036723 243 HR----AEGVDYALESIHNIKE 260 (290)
Q Consensus 243 ~~----~~~ad~v~~sl~el~~ 260 (290)
.. ...++++++++.|+..
T Consensus 197 ~~~~~~~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 197 PKQTHLYSSADEVINSLLDLQP 218 (382)
T ss_pred CcchhhccCccEEeCCHhHcCH
Confidence 42 4578999999998864
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=179.45 Aligned_cols=117 Identities=15% Similarity=0.289 Sum_probs=102.6
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.+.++||+.++|+.|+ ++++++||++.. ++.+|+..+|+.++++++.+.
T Consensus 111 ~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~------------------------ 161 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR------------------------ 161 (238)
T ss_pred cCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCc------------------------
Confidence 4688999999999996 789999998764 478899999999999988775
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AE 246 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~ 246 (290)
.||+|++|+.+++++|++|++|++|||+. +|+.+|+++|+.++|+.++.. ..
T Consensus 162 -------------------~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~ 222 (238)
T PRK10748 162 -------------------SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRL 222 (238)
T ss_pred -------------------CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccC
Confidence 79999999999999999999999999995 999999999999999977532 13
Q ss_pred CcceeecCHhHHHHHh
Q 036723 247 GVDYALESIHNIKEAL 262 (290)
Q Consensus 247 ~ad~v~~sl~el~~~l 262 (290)
.|++.+.++.||.++|
T Consensus 223 ~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 223 LPHIEISRLASLTSLI 238 (238)
T ss_pred CCCEEECCHHHHHhhC
Confidence 5888999999998764
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=196.75 Aligned_cols=204 Identities=13% Similarity=0.197 Sum_probs=145.6
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCCCCC---HHHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGYQFD---CDDFH 87 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~---~~~~~ 87 (290)
++|+++|+||+||||+|+...+..++.+.++++.....+...... ..+.+.+|...... ..+..... .+.+.
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~----~~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~ 313 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPI----DKYREIMGVPLPKVWEALLPDHSLEIREQTD 313 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCH----HHHHHHcCCChHHHHHHHhhhcchhHHHHHH
Confidence 455899999999999998888888888777663221111111111 12223334333221 11111111 11122
Q ss_pred HH----HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 88 SY----VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 88 ~~----~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
.. +.+.......+++||+.++|+.|+ ++++|+||+....+...++++++..+|+.++++++..
T Consensus 314 ~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~---------- 383 (459)
T PRK06698 314 AYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN---------- 383 (459)
T ss_pred HHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC----------
Confidence 22 222222235688999999999986 7899999999999999999999999999999988654
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.||+|+.+..++++++ +++|++|||+.+|+.+|+++|+.+|++.
T Consensus 384 ----------------------------------~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~ 427 (459)
T PRK06698 384 ----------------------------------SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCN 427 (459)
T ss_pred ----------------------------------CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEe
Confidence 3677789999998875 6899999999999999999999999998
Q ss_pred CCCC----CCCcceeecCHhHHHHHhHHH
Q 036723 241 TSHR----AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 241 ~~~~----~~~ad~v~~sl~el~~~l~~~ 265 (290)
++.. ...++++++++.||.+++..+
T Consensus 428 ~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 428 FDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred CCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 7642 346899999999999877554
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=169.06 Aligned_cols=104 Identities=22% Similarity=0.467 Sum_probs=96.6
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..+.++||+.++|+.|+ ++++++||++...+...++++|+..+|+.++++++++.
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~---------------------- 146 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA---------------------- 146 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC----------------------
Confidence 34678999999999986 77999999999999999999999999999999998775
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.+||+.++.
T Consensus 147 ---------------------~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 147 ---------------------YKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred ---------------------CCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 7999999999999999999999999999999999999999999998754
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=180.31 Aligned_cols=119 Identities=13% Similarity=0.266 Sum_probs=99.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCc---ceeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDC---FERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~---f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
.+.++||+.++|+.|+ ++++|+||+.......+++.++...+ |+.+ ++++++.
T Consensus 142 ~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~-------------------- 200 (286)
T PLN02779 142 ALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPK-------------------- 200 (286)
T ss_pred CCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCC--------------------
Confidence 3689999999999885 78999999999999988887743333 3444 5555443
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC----CCC
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR----AEG 247 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~----~~~ 247 (290)
.||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.++.. ...
T Consensus 201 -----------------------~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ 257 (286)
T PLN02779 201 -----------------------KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSG 257 (286)
T ss_pred -----------------------CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCC
Confidence 69999999999999999999999999999999999999999999977643 346
Q ss_pred cceeecCHhHHHH
Q 036723 248 VDYALESIHNIKE 260 (290)
Q Consensus 248 ad~v~~sl~el~~ 260 (290)
++++++++.++..
T Consensus 258 ad~vi~~~~~l~~ 270 (286)
T PLN02779 258 ADAVFDCLGDVPL 270 (286)
T ss_pred CcEEECChhhcch
Confidence 8999999998864
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=168.06 Aligned_cols=170 Identities=21% Similarity=0.344 Sum_probs=121.3
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHHHH--
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDDFH-- 87 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~-- 87 (290)
+|+|+||+||||+|+...+..++.+ +.+++|.+... .......|...... ...+...+.+.+.
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK-----QYNTSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH-----HHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5899999999999976655555552 44556665321 11111123222211 1111122222221
Q ss_pred -----HHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccc
Q 036723 88 -----SYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLV 159 (290)
Q Consensus 88 -----~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 159 (290)
+.+.+.+......++||+.++|+.|+ ++++++||+ ..+..+++++|+..+|+.+++++..+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~-------- 140 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE-------- 140 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence 22222222245789999999999885 778999988 667889999999999999999887664
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 160 DQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+|++|+.+++++|++++++++|||+.+|+++|+++|+++|++
T Consensus 141 -----------------------------------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 141 -----------------------------------GKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred -----------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 699999999999999999999999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-21 Score=167.08 Aligned_cols=173 Identities=18% Similarity=0.260 Sum_probs=120.9
Q ss_pred cEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHH--HHHHHHHHH-------H----cccHH---------H
Q 036723 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVP--ELCVSLYKF-------Y----GTTLA---------G 73 (290)
Q Consensus 16 k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~--~~~~~~~~~-------~----g~~~~---------~ 73 (290)
|+|+||+||||+|+...+..++.+ +....|++..... ......++. + |.+.. .
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 589999999999988878777763 4555676543211 010111111 1 22211 1
Q ss_pred HHHcCCCCCHHHH---HHHHhh-cCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEee
Q 036723 74 LRAIGYQFDCDDF---HSYVHG-RLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISF 146 (290)
Q Consensus 74 ~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~ 146 (290)
+...+. .+...+ .+.+.+ ........++||+.++|..|+ ++++|+||+.... ...++++|+..+|+.++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHHhcceEEee
Confidence 111121 111112 121211 111234578999999999986 6899999987754 7788999999999999999
Q ss_pred cccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cc
Q 036723 147 ETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RN 225 (290)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~D 225 (290)
++++. +||+|+.|+.+++++|++|++|++|||+. +|
T Consensus 154 ~~~~~-------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~D 190 (203)
T TIGR02252 154 YEVGA-------------------------------------------EKPDPKIFQEALERAGISPEEALHIGDSLRND 190 (203)
T ss_pred cccCC-------------------------------------------CCCCHHHHHHHHHHcCCChhHEEEECCCchHH
Confidence 88765 79999999999999999999999999998 89
Q ss_pred hHHHHhcCCeEEE
Q 036723 226 LETGKRLGLHTVW 238 (290)
Q Consensus 226 i~~a~~aGi~~i~ 238 (290)
+.+|+++|+.+||
T Consensus 191 i~~A~~aG~~~i~ 203 (203)
T TIGR02252 191 YQGARAAGWRALL 203 (203)
T ss_pred HHHHHHcCCeeeC
Confidence 9999999999885
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=168.11 Aligned_cols=169 Identities=24% Similarity=0.271 Sum_probs=119.3
Q ss_pred EEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-----HHHHcCCCCCHHHHH----
Q 036723 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-----GLRAIGYQFDCDDFH---- 87 (290)
Q Consensus 17 ~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~---- 87 (290)
+|+||+||||+|+...+..++. .+++.+|.+.... . .. ...|.+.. .+...+...+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~-----~~~~~~g~~~~~~-~-~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWK-----ALADELGIPFDEE-F-NE---SLKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHH-----HHHHHcCCCCCHH-H-HH---HhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 5899999999997776666665 3556667653221 1 01 11121111 111123222322221
Q ss_pred ---HHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 88 ---SYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 88 ---~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+.+.+... .....++||+.++|+.|+ ++++++||+.. ....++++++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~--------- 139 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK--------- 139 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC---------
Confidence 11222111 123578999999999996 77899998643 4568999999999999999887765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.||+|+.|+.++++++++|++|++|||+.+|+++|+++|+.+|+++
T Consensus 140 ----------------------------------~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 140 ----------------------------------GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ----------------------------------CCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 7999999999999999999999999999999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.1e-23 Score=168.47 Aligned_cols=168 Identities=29% Similarity=0.521 Sum_probs=122.6
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHHHHHHHhh
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDDFHSYVHG 92 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~ 92 (290)
|+||+||||+++...+...+. ..+.+.++.+.. . ..+...++...... ...+ .....+.+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~----~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQ----RLALEEFGLEIS-A----EELRELFGKSYEEALERLLERFG--IDPEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHH----HHHHHHTTHHHH-H----HHHHHHTTSHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHH----HHHHHHhCCCCC-H----HHHHHHhCCCHHHHHHHhhhccc--hhHHHHHHHhhh
Confidence 799999999995553444443 334555555411 1 11211122111111 0011 012233333333
Q ss_pred cCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCC
Q 036723 93 RLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 93 ~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
........++||+.++|+.|+ ++++++||++...+...++++|+..+|+.++++++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------ 131 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS------------------ 131 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS------------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh------------------
Confidence 321256789999999999986 88999999999999999999999999999999998775
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+++.|+.+++++|++|++|++|||+..|+++|+++|+.+|++
T Consensus 132 -------------------------~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 132 -------------------------RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp -------------------------STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred -------------------------hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 799999999999999999999999999999999999999999986
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-22 Score=165.43 Aligned_cols=97 Identities=33% Similarity=0.518 Sum_probs=88.5
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+.++||+.++|+.|+ ++++++||+.... .....++|+..+|+.++++++.+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~------------------------ 138 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR------------------------ 138 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC------------------------
Confidence 688999999999885 6799999999888 666677999999999999887664
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
+||+|+.|+.+++++|++|++|++|||+..|+++|+++|+.+|++
T Consensus 139 -------------------~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 139 -------------------GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred -------------------CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 799999999999999999999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-21 Score=162.95 Aligned_cols=181 Identities=18% Similarity=0.175 Sum_probs=120.9
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-H-HHHcCCCCCHHH---HHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-G-LRAIGYQFDCDD---FHS 88 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~---~~~ 88 (290)
|+|+|+||+||||+|+...+ . .+.+..|++.. .+ ....|.... . ....+ .+... +.+
T Consensus 1 m~k~viFDlDGTLiD~~~~~----~-----~~~~~~g~~~~---~~----~~~~g~~~~~~~~~~~~--~~~~~~~~~~~ 62 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGL----P-----YFAQKYNIPTD---HI----LKMIQDERFRDPGELFG--CDQELAKKLIE 62 (197)
T ss_pred CCcEEEEecCCceEchhhcc----H-----HHHHhcCCCHH---HH----HHHHhHhhhcCHHHHhc--ccHHHHHHHhh
Confidence 38999999999999943322 2 24456776532 11 111121100 0 01111 11211 222
Q ss_pred HHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCc----ceeEEeecccCCCCCCccccccc
Q 036723 89 YVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDC----FERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 89 ~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~----f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+..........++||+.++|+.|+ ++.+++||+........+..+++..+ |+.+++.+.
T Consensus 63 ~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------- 128 (197)
T PHA02597 63 KYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------- 128 (197)
T ss_pred hhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc--------------
Confidence 2221111244678999999999996 56788888877766666777777654 455555553
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc--CCeEEEec
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL--GLHTVWVG 240 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a--Gi~~i~v~ 240 (290)
.||+|+.++.+++++| +++++||||+.+|+.+|+++ |+++|++.
T Consensus 129 --------------------------------~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~ 174 (197)
T PHA02597 129 --------------------------------DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHML 174 (197)
T ss_pred --------------------------------CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEec
Confidence 3677899999999999 88999999999999999999 99999999
Q ss_pred CCCCCC--CcceeecCHhHHHH
Q 036723 241 TSHRAE--GVDYALESIHNIKE 260 (290)
Q Consensus 241 ~~~~~~--~ad~v~~sl~el~~ 260 (290)
++.... .+++.++|+.|+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 175 RGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred chhhccccchhhhhccHHHHhc
Confidence 887533 46688888888764
|
2 hypothetical protein; Provisional |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.5e-21 Score=194.93 Aligned_cols=204 Identities=19% Similarity=0.295 Sum_probs=148.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-----HcCC-CCCHHH-
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-----AIGY-QFDCDD- 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~~~- 85 (290)
+++|+|+|||||||+|+...+..++. .++++.|++.... .+...+|.....+. ..+. ..+.+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~-----~~~~~~G~~it~e-----~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAV-----DVFAEMGVEVTVE-----DFVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHH-----HHHHHcCCCCCHH-----HHHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 35899999999999997766666666 3455667754321 12223343332211 1111 122222
Q ss_pred ---HHHHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC-CcceeEEeecccCCCCCCcc
Q 036723 86 ---FHSYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE-DCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 86 ---~~~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~~~~~~ 157 (290)
+.+.+.+... .....++||+.++|+.|+ ++++|+||.....+...++++++. .+|+.+++++++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------ 216 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------ 216 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc------
Confidence 2222222211 122347999999999996 789999999999999999999996 78999999988765
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++||.+|
T Consensus 217 -------------------------------------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I 259 (1057)
T PLN02919 217 -------------------------------------LKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCI 259 (1057)
T ss_pred -------------------------------------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 7999999999999999999999999999999999999999999
Q ss_pred EecCCCC-----CCCcceeecCHhHHHHHhHHHHHhhCC
Q 036723 238 WVGTSHR-----AEGVDYALESIHNIKEALPELWEVAGE 271 (290)
Q Consensus 238 ~v~~~~~-----~~~ad~v~~sl~el~~~l~~~~~~~~~ 271 (290)
++.++.. ..+++++++++.++. +..++...++
T Consensus 260 ~v~~~~~~~~L~~~~a~~vi~~l~el~--~~~~~~~~~~ 296 (1057)
T PLN02919 260 AVTTTLSEEILKDAGPSLIRKDIGNIS--LSDILTGGSD 296 (1057)
T ss_pred EECCCCCHHHHhhCCCCEEECChHHCC--HHHHHhcCCC
Confidence 9988753 457899999999974 3444444433
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8e-21 Score=162.55 Aligned_cols=102 Identities=21% Similarity=0.272 Sum_probs=87.9
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHH--HHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTH--AARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
.+.++||+.++|+.|+ ++++++||+.... ....+..+++..+|+.++++++.+.
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------------- 150 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------------- 150 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC---------------------
Confidence 4678999999999986 7899999986544 3333445678889999999887764
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+|++|+.+++++|++|++|++|||+..|+.+|+++|+.+|++.++
T Consensus 151 ----------------------~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 151 ----------------------RKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred ----------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 799999999999999999999999999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.8e-20 Score=154.60 Aligned_cols=119 Identities=18% Similarity=0.337 Sum_probs=97.9
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHh-cCCCCcceeEEeecccCCCC
Q 036723 78 GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSR-LGLEDCFERIISFETLNSTD 153 (290)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~~ 153 (290)
+...+.+.+...+.+.. ..++||+.++|+.|+ ++++++||++.......+.. .++..+|+.++++++++.
T Consensus 66 ~~~~~~~~~~~~~~~~~----~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~-- 139 (199)
T PRK09456 66 ALSLSYEQFAHGWQAVF----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM-- 139 (199)
T ss_pred CCCCCHHHHHHHHHHHH----hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC--
Confidence 33334444444443322 357899999999985 78999999998877766655 477889999999998876
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+||+|+.|+.+++++|++|++|++|||+..|+.+|+++|
T Consensus 140 -----------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG 178 (199)
T PRK09456 140 -----------------------------------------RKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALG 178 (199)
T ss_pred -----------------------------------------CCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcC
Confidence 799999999999999999999999999999999999999
Q ss_pred CeEEEecCCC
Q 036723 234 LHTVWVGTSH 243 (290)
Q Consensus 234 i~~i~v~~~~ 243 (290)
+.++++.++.
T Consensus 179 ~~~i~~~~~~ 188 (199)
T PRK09456 179 ITSILVTDKQ 188 (199)
T ss_pred CEEEEecCCc
Confidence 9999997754
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=159.03 Aligned_cols=131 Identities=16% Similarity=0.201 Sum_probs=96.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.++++||+.++|+.|+ ++++|+||+....+..+++.+|+..+|...+..++-..
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~----------------------- 139 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKL----------------------- 139 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEE-----------------------
Confidence 3578999999999986 78999999999999999999999888865443331100
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeec-
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALE- 253 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~- 253 (290)
.+.. ..+...++|++..++.+++++++++++|++|||+.+|+++|+.+|+.+++.+.......+++++.
T Consensus 140 -~~~~---------~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 140 -TGLV---------EGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINK 209 (219)
T ss_pred -EEEe---------cCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCC
Confidence 0000 00001147789999999999999999999999999999999999998655332222456788877
Q ss_pred -CHhHHHHH
Q 036723 254 -SIHNIKEA 261 (290)
Q Consensus 254 -sl~el~~~ 261 (290)
++.++..+
T Consensus 210 ~~~~~~~~~ 218 (219)
T TIGR00338 210 KDLTDILPL 218 (219)
T ss_pred CCHHHHHhh
Confidence 45666553
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=152.63 Aligned_cols=88 Identities=23% Similarity=0.256 Sum_probs=78.6
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDD 177 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
+.++..++|+.|+ ++++|+||++...+...++++|+..+|+.++++++..
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------------------- 159 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP--------------------------- 159 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC---------------------------
Confidence 4445577777775 7899999999999999999999999999999988654
Q ss_pred cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 178 YCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
.||+|+.+..+++++|+++++|++|||+.+|+++|+++
T Consensus 160 -----------------~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 -----------------PKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -----------------CCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 49999999999999999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=156.84 Aligned_cols=185 Identities=18% Similarity=0.210 Sum_probs=128.6
Q ss_pred cCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCC--CCHHHHHHH---Hh
Q 036723 22 LDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQ--FDCDDFHSY---VH 91 (290)
Q Consensus 22 lDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~--~~~~~~~~~---~~ 91 (290)
|||||+|+...+..++. .+.+.+|++... .......|...... ...+.. ...+.+... +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~-----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQE-----KILARYGKTFDW-----SLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHH-----HHHHHcCCCCCH-----HHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999997766666666 345666765321 11222334433211 111221 122222221 11
Q ss_pred hcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHH-HHhcCCCCcceeEEeec--ccCCCCCCcccccccccc
Q 036723 92 GRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARV-LSRLGLEDCFERIISFE--TLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 92 ~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~-l~~~gl~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~ 165 (290)
... .....++||+.++|+.|+ ++++|+||..+...... .+..++..+|+.+++++ +++.
T Consensus 71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~-------------- 135 (220)
T PLN02811 71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ-------------- 135 (220)
T ss_pred HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------
Confidence 111 134678999999999986 78999999987655543 44457788999999988 6654
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC---CCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN---INPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~---~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
+||+|++|..++++++ ++|++|++|||+.+|+++|+++|+++|++.++
T Consensus 136 -----------------------------~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~ 186 (220)
T PLN02811 136 -----------------------------GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDP 186 (220)
T ss_pred -----------------------------CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCC
Confidence 6999999999999997 99999999999999999999999999999776
Q ss_pred CC----CCCcceeecCHhHHHH
Q 036723 243 HR----AEGVDYALESIHNIKE 260 (290)
Q Consensus 243 ~~----~~~ad~v~~sl~el~~ 260 (290)
.. ..+++++++++.|+..
T Consensus 187 ~~~~~~~~~~d~vi~~~~e~~~ 208 (220)
T PLN02811 187 RLDKSYCKGADQVLSSLLDFKP 208 (220)
T ss_pred CCcHhhhhchhhHhcCHhhCCH
Confidence 42 3467888888887653
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.4e-20 Score=151.60 Aligned_cols=89 Identities=24% Similarity=0.342 Sum_probs=81.9
Q ss_pred CCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 97 MMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
..+.++||+.++|+ +++|+||++...+...++++++..+|+.++++++++.
T Consensus 87 ~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------- 137 (175)
T TIGR01493 87 KNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA------------------------- 137 (175)
T ss_pred hcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC-------------------------
Confidence 34678999999999 4789999999999999999999999999999987765
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+.+|+++
T Consensus 138 ------------------~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 138 ------------------YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred ------------------CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 79999999999999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.79 E-value=9e-19 Score=142.37 Aligned_cols=151 Identities=20% Similarity=0.320 Sum_probs=108.5
Q ss_pred EEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhcCCC
Q 036723 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPY 96 (290)
Q Consensus 17 ~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (290)
+|+||+||||+|+...+..++.+.++ +++.+ .. .+....|.....+... ...+.+.. . . .
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~-----~~~~~---~~----~~~~~~g~~~~~~~~~-----~~~~~~~~-~-~-~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLE-----EFGED---FQ----ALKALRGLAEELLYRI-----ATSFEELL-G-Y-D 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHH-----Hhccc---HH----HHHHHHccChHHHHHH-----HHHHHHHh-C-c-c
Confidence 58999999999976666666664444 33432 11 1111223322222111 01122211 1 1 1
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
.....+||+.++|+.|+ ++++++||+........++.+ +..+|+.++++++.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~----------------------- 116 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG----------------------- 116 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-----------------------
Confidence 24456799999999984 789999999999999999988 788899998877654
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+||+|+.|+.+++++|+++ +|++|||+.+|+++|+++|
T Consensus 117 ---------------------~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 ---------------------AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred ---------------------CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 5999999999999999999 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=146.29 Aligned_cols=125 Identities=21% Similarity=0.226 Sum_probs=96.1
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+.++||+.++|+.|+ ++++|+||... ......++++|+ .|+.++.+......
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~-------- 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPED-------- 97 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCC--------
Confidence 356789999999885 78999999863 233445666776 37777654321100
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.. ..+||+|.+|..+++++|++++++++|||+.+|+.+|+++|+.++++.
T Consensus 98 --------------------------~~----~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~ 147 (181)
T PRK08942 98 --------------------------GC----DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR 147 (181)
T ss_pred --------------------------CC----cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 00 017999999999999999999999999999999999999999999997
Q ss_pred CCCC-----CCCc--ceeecCHhHHHHHhH
Q 036723 241 TSHR-----AEGV--DYALESIHNIKEALP 263 (290)
Q Consensus 241 ~~~~-----~~~a--d~v~~sl~el~~~l~ 263 (290)
++.. ...+ +++++++.++.+++.
T Consensus 148 ~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 148 TGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred CCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 7643 2345 899999999988664
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=147.94 Aligned_cols=184 Identities=17% Similarity=0.210 Sum_probs=126.8
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH----------cc-----cHHHHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY----------GT-----TLAGLR 75 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~----------g~-----~~~~~~ 75 (290)
..+.+++|+||++|||+.........+. .+.+.+|++... ..+...+.+.+ |. +...+.
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~~~~~y~-----~i~~~~gl~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww 76 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPPVMEVYC-----EIAEAYGLEYDD-SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWW 76 (237)
T ss_pred cccceEEEEEeCCCceeecCCccHHHHH-----HHHHHhCCCCCH-HHHhHhhhHHHHhhcccCCcccccCCcccHHHHH
Confidence 4567999999999999986666666665 467778887443 22222222221 11 111111
Q ss_pred H-c---CCCCC----HHHHHHHHhhc-CCC---CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc
Q 036723 76 A-I---GYQFD----CDDFHSYVHGR-LPY---MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF 140 (290)
Q Consensus 76 ~-~---~~~~~----~~~~~~~~~~~-~~~---~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f 140 (290)
. + .+... .+.....+..+ +.. ..-...+++.++++.|+ ..++++||.++... ..+..+++..+|
T Consensus 77 ~~lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~f 155 (237)
T KOG3085|consen 77 PKLVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYF 155 (237)
T ss_pred HHHHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhh
Confidence 0 0 00000 00011000011 111 23355678889999997 46788999877665 788899999999
Q ss_pred eeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEc
Q 036723 141 ERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFD 220 (290)
Q Consensus 141 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iG 220 (290)
|.++.|+..+. .||+|++|+.+++++++.|++|++||
T Consensus 156 D~vv~S~e~g~-------------------------------------------~KPDp~If~~al~~l~v~Pee~vhIg 192 (237)
T KOG3085|consen 156 DFVVESCEVGL-------------------------------------------EKPDPRIFQLALERLGVKPEECVHIG 192 (237)
T ss_pred hhhhhhhhhcc-------------------------------------------CCCChHHHHHHHHHhCCChHHeEEec
Confidence 99999999886 79999999999999999999999999
Q ss_pred CCc-cchHHHHhcCCeEEEecCCCC
Q 036723 221 DSI-RNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 221 Ds~-~Di~~a~~aGi~~i~v~~~~~ 244 (290)
|+. ||+++|+++||.++.+.++..
T Consensus 193 D~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 193 DLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred CccccccHhHHHcCCEEEEEccccc
Confidence 999 899999999999999976543
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=9e-18 Score=144.91 Aligned_cols=201 Identities=16% Similarity=0.178 Sum_probs=122.4
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-HHH-cC-CCCCHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-LRA-IG-YQFDCDDFHSY 89 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~-~~-~~~~~~~~~~~ 89 (290)
+++|+|+||+||||++. ..+ . .+.+++|.+.... .....+. ........ +.. .+ .....+.+.+.
T Consensus 10 ~~~k~viFDfDGTL~~~-~~~----~-----~~~~~~g~~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T PLN02954 10 RSADAVCFDVDSTVCVD-EGI----D-----ELAEFCGAGEAVA-EWTAKAM-GGSVPFEEALAARLSLFKPSLSQVEEF 77 (224)
T ss_pred ccCCEEEEeCCCcccch-HHH----H-----HHHHHcCChHHHH-HHHHHHH-CCCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 45899999999999993 222 2 3555666542211 1111111 00011111 111 00 11223334444
Q ss_pred HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC--CcceeEEeecccCCCCCCccccccccc
Q 036723 90 VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE--DCFERIISFETLNSTDKGTVLVDQDAS 164 (290)
Q Consensus 90 ~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~ 164 (290)
+.. ....++||+.++|+.|+ ++++|+|++....++.+++.+|+. .+|...+..+.-+...+
T Consensus 78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g---------- 143 (224)
T PLN02954 78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAG---------- 143 (224)
T ss_pred HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEEC----------
Confidence 433 12468899999999885 679999999999999999999986 35654333221110000
Q ss_pred cCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 165 ESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
... ..+.-.+++|++.++.+++++|. +++++|||+.+|+.+++++|+.++..-++..
T Consensus 144 ----------------~~~-----~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~ 200 (224)
T PLN02954 144 ----------------FDE-----NEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQ 200 (224)
T ss_pred ----------------ccC-----CCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCc
Confidence 000 00000157788999999999885 6899999999999999998887654322221
Q ss_pred -----CCCcceeecCHhHHHHHh
Q 036723 245 -----AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 -----~~~ad~v~~sl~el~~~l 262 (290)
...++++++++.+|.+++
T Consensus 201 ~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 201 VREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred cCHHHHhcCCEEECCHHHHHHhh
Confidence 335899999999998754
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-18 Score=143.56 Aligned_cols=121 Identities=16% Similarity=0.174 Sum_probs=93.1
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchH--------HHHHHHHhcCCCCcceeEE-eecccCCCCCCccccccccccC
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKT--------HAARVLSRLGLEDCFERII-SFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~--------~~~~~l~~~gl~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
+.++||+.++|+.|+ ++++|+||.... .....++.+|+..+|.... .++....
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------- 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------- 91 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC---------------
Confidence 356799999999885 789999998642 1333466666544332221 2222222
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
.||+|+.|..++++++++|++|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 92 ----------------------------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~ 143 (173)
T PRK06769 92 ----------------------------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYD 143 (173)
T ss_pred ----------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCch
Confidence 79999999999999999999999999999999999999999999987642
Q ss_pred ----------CCCcceeecCHhHHHHHh
Q 036723 245 ----------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 ----------~~~ad~v~~sl~el~~~l 262 (290)
...++++++++.||.++|
T Consensus 144 ~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 144 ALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred hhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 235889999999998754
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-18 Score=142.40 Aligned_cols=128 Identities=17% Similarity=0.176 Sum_probs=95.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+.++||+.++|+.|+ ++++++||.+. ......+..+++. |+.++.+......
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~-------- 94 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG-------- 94 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc--------
Confidence 457789999999986 78999999874 3444556666666 7776654321100
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE-EEe
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT-VWV 239 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~-i~v 239 (290)
. .........+||+|++|..+++++|+++++|+||||+.+|+++|+++|+.+ +++
T Consensus 95 ---------~---------------~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v 150 (176)
T TIGR00213 95 ---------V---------------EEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLV 150 (176)
T ss_pred ---------c---------------ccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEE
Confidence 0 000000012799999999999999999999999999999999999999998 798
Q ss_pred cCCCC-----CCCcceeecCHhHHHH
Q 036723 240 GTSHR-----AEGVDYALESIHNIKE 260 (290)
Q Consensus 240 ~~~~~-----~~~ad~v~~sl~el~~ 260 (290)
.++.. ..+|+++++++.||.+
T Consensus 151 ~~g~~~~~~~~~~ad~~i~~~~el~~ 176 (176)
T TIGR00213 151 RTGKPITPEAENIADWVLNSLADLPQ 176 (176)
T ss_pred ecCCcccccccccCCEEeccHHHhhC
Confidence 87753 2468999999999863
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=140.67 Aligned_cols=114 Identities=16% Similarity=0.151 Sum_probs=87.8
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..+.++||+.++|+.|+ ++++|+|++....+..+++.+|+..+|...+..++.+..
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--------------------- 135 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--------------------- 135 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE---------------------
Confidence 34578999999999985 789999999999999999999998888776655433210
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.|.... ....++++..++.+++++|++++++++|||+.+|+++|+.+|++++....++
T Consensus 136 -------~p~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 136 -------QPDGIV-----RVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred -------ecceee-----EEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 000000 0012456688999999999999999999999999999999999877666554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=141.84 Aligned_cols=195 Identities=15% Similarity=0.114 Sum_probs=121.5
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHH-HHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhc
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPEL-CVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGR 93 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (290)
+++|+||+||||++ . . +. .+..++|++....... ...+...++.....+... ..+.+++....
T Consensus 1 ~~~v~FD~DGTL~~--~-~---~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVP--E-I---WI-----AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEH--GLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChh--h-H---HH-----HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHc--CCCHHHHHHHH---
Confidence 36899999999994 1 1 22 2445666543210000 000111112222222211 23344444333
Q ss_pred CCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 94 LPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 94 ~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
..+.++||+.++|..|+ ++++++|++....+...++++|+..+|+..+...+.+.-.+
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~----------------- 124 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITG----------------- 124 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEEC-----------------
Confidence 34578899999999886 78999999999999999999999988877655432111000
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD 249 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad 249 (290)
..++.|.....+++.++..+++|++||||.+|+.+++++|+.. .+++++. ...++
T Consensus 125 ----------------------~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~~~~~~~~~~ 181 (205)
T PRK13582 125 ----------------------YDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI-LFRPPANVIAEFPQ 181 (205)
T ss_pred ----------------------ccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCE-EECCCHHHHHhCCc
Confidence 0112223334555566667789999999999999999999854 4444432 23455
Q ss_pred e-eecCHhHHHHHhHHHHHh
Q 036723 250 Y-ALESIHNIKEALPELWEV 268 (290)
Q Consensus 250 ~-v~~sl~el~~~l~~~~~~ 268 (290)
+ +++++.+|.+.+.+....
T Consensus 182 ~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 182 FPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred ccccCCHHHHHHHHHHHHhh
Confidence 5 899999999888876543
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-17 Score=139.90 Aligned_cols=195 Identities=19% Similarity=0.216 Sum_probs=144.7
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDD 85 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~ 85 (290)
....+.+++||+||||+|+...++..+. -++.++|.+.... ...+..|...... ......++.++
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~-----~~~~~ygk~~~~~-----~~~~~mG~~~~eaa~~~~~~~~dp~s~ee 75 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQ-----ELLDRYGKPYPWD-----VKVKSMGKRTSEAARLFVKKLPDPVSREE 75 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHH-----HHHHHcCCCChHH-----HHHHHcCCCHHHHHHHHHhhcCCCCCHHH
Confidence 4556889999999999997777776666 4677777644331 2222345433322 22345667777
Q ss_pred HHHHHhhcCC--CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcC-CCCcceeEEee--cccCCCCCCcc
Q 036723 86 FHSYVHGRLP--YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLG-LEDCFERIISF--ETLNSTDKGTV 157 (290)
Q Consensus 86 ~~~~~~~~~~--~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~g-l~~~f~~i~~~--~~~~~~~~~~~ 157 (290)
|....+..+. .....+.||+.+++..|+ +++.++|+..+...+..+++++ +...|..++.. .++..
T Consensus 76 ~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~------ 149 (222)
T KOG2914|consen 76 FNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN------ 149 (222)
T ss_pred HHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC------
Confidence 7655444321 256788999999999996 7899999999999999999887 66778877763 32332
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHhcCCeE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+||+|++|..+++++|.++ +.|++|+|+...+++|+++||.+
T Consensus 150 -------------------------------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~v 192 (222)
T KOG2914|consen 150 -------------------------------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQV 192 (222)
T ss_pred -------------------------------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeE
Confidence 7999999999999999998 99999999999999999999999
Q ss_pred EEecCCCC----CCCcceeecCHhHH
Q 036723 237 VWVGTSHR----AEGVDYALESIHNI 258 (290)
Q Consensus 237 i~v~~~~~----~~~ad~v~~sl~el 258 (290)
|++..... ..+++.+++++.+.
T Consensus 193 i~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 193 VGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred EEecCCCcchhhhhccceeccccccc
Confidence 99988432 44566666665543
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-17 Score=147.61 Aligned_cols=132 Identities=15% Similarity=0.126 Sum_probs=95.6
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+++.||+.++++.|+ ++++|+|++........++++++...+.+.+...+-..
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l----------------------- 235 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL----------------------- 235 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-----------------------
Confidence 4678999999998886 78999999999999999999998765543222111000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~s 254 (290)
.+. .....+.+|||++.++.+++++|+++++|++|||+.||+.|++.||+.+++...+.-+..|++++++
T Consensus 236 -tg~---------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~~ 305 (322)
T PRK11133 236 -TGN---------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIRH 305 (322)
T ss_pred -EeE---------ecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEecC
Confidence 000 0000112689999999999999999999999999999999999999988773333336678888763
Q ss_pred --HhHHHHHh
Q 036723 255 --IHNIKEAL 262 (290)
Q Consensus 255 --l~el~~~l 262 (290)
++.+.-+|
T Consensus 306 ~~l~~~l~~~ 315 (322)
T PRK11133 306 ADLMGVLCIL 315 (322)
T ss_pred cCHHHHHHHh
Confidence 44444433
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=143.80 Aligned_cols=127 Identities=15% Similarity=0.106 Sum_probs=92.2
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC--cc--eeEEeecccCCCCCCccccccccccCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED--CF--ERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
..+.++||+.++|+.|+ ++++|+|++....+..+++++ +.. .+ +..+..+....
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------------ 131 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------------ 131 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE------------------
Confidence 34688999999999886 789999999999999999988 643 11 11222221111
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHH----------HHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEA----------FEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~----------~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+|.. ...++++++.++++|++||||.+|+.+|++||+.++ -
T Consensus 132 -------------------------~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~ 185 (219)
T PRK09552 132 -------------------------TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-R 185 (219)
T ss_pred -------------------------eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-H
Confidence 2333322 235778889999999999999999999999999444 2
Q ss_pred cC--CC--CCCCcceeecCHhHHHHHhHHHHHh
Q 036723 240 GT--SH--RAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 240 ~~--~~--~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
.. .+ ....+.+.++++.|+.+.|.++|+.
T Consensus 186 ~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~~ 218 (219)
T PRK09552 186 DFLITKCEELGIPYTPFETFHDVQTELKHLLEV 218 (219)
T ss_pred HHHHHHHHHcCCCccccCCHHHHHHHHHHHhcc
Confidence 11 11 2345788899999999999998875
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=6e-18 Score=136.91 Aligned_cols=99 Identities=19% Similarity=0.291 Sum_probs=79.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEe----ecccCCCCCCcc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIIS----FETLNSTDKGTV 157 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~----~~~~~~~~~~~~ 157 (290)
.++||+.++|+.|+ ++++|+||.++ ..+...++++++... ..++. ++..+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~~~~------ 99 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADNCSC------ 99 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCCCCC------
Confidence 56789999988885 88999999874 456667888887621 12222 222222
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
.||+|++|+.+++++|+++++|++|||+..|+++|+++|+.++
T Consensus 100 -------------------------------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 100 -------------------------------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 6999999999999999999999999999999999999999999
Q ss_pred EecCC
Q 036723 238 WVGTS 242 (290)
Q Consensus 238 ~v~~~ 242 (290)
|+..+
T Consensus 143 ~i~~~ 147 (147)
T TIGR01656 143 LLVDG 147 (147)
T ss_pred EecCC
Confidence 99764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-16 Score=136.45 Aligned_cols=177 Identities=14% Similarity=0.181 Sum_probs=119.9
Q ss_pred ccEEEEecCCCcccCC---CChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcc--------cHHHHHHcCCC-CC
Q 036723 15 YDCLLFDLDDTIYPLT---SGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGT--------TLAGLRAIGYQ-FD 82 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~---~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~~-~~ 82 (290)
+++|++|+.||+.+.+ ..+++...+.+.+++.....-+ .... +.+..+. .+..+...... ..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~k~~~ 74 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST--IVEN----LRELGKTPEELILLRKLHAEMDKDRKATP 74 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH--HHHH----HHHhccCCcHHHHHHHHHHHHHcCCCcch
Confidence 5799999999999743 4556666667777555433222 1111 1111111 00001011111 11
Q ss_pred HHH-----HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc---CCCCcceeEEeecccCC
Q 036723 83 CDD-----FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL---GLEDCFERIISFETLNS 151 (290)
Q Consensus 83 ~~~-----~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~ 151 (290)
... +.+.+... .....++||+.++|+.|+ ++++|+||++.......++++ ++..+|+.++.. ..+
T Consensus 75 lk~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g- 150 (220)
T TIGR01691 75 LKTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG- 150 (220)
T ss_pred HHHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc-
Confidence 111 12222221 245678999999999995 789999999999888888776 566778877642 222
Q ss_pred CCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHh
Q 036723 152 TDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~ 231 (290)
.||+|+.|..+++++|++|++|++|||+..|+++|++
T Consensus 151 -------------------------------------------~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~ 187 (220)
T TIGR01691 151 -------------------------------------------LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARK 187 (220)
T ss_pred -------------------------------------------cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999
Q ss_pred cCCeEEEecCCCC
Q 036723 232 LGLHTVWVGTSHR 244 (290)
Q Consensus 232 aGi~~i~v~~~~~ 244 (290)
+|+.++++.++..
T Consensus 188 AG~~ti~v~r~g~ 200 (220)
T TIGR01691 188 AGLHTGQLVRPGN 200 (220)
T ss_pred cCCEEEEEECCCC
Confidence 9999999987653
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-17 Score=146.55 Aligned_cols=69 Identities=16% Similarity=0.300 Sum_probs=62.2
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHHHHh
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~~~l 262 (290)
++||+|.+|+.++++++++|+++++|||+. +|+.+|+++|+.++++.+|.. ...|+++++++.||.+++
T Consensus 177 ~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 177 VGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 479999999999999999999999999997 899999999999999988741 346899999999998754
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=126.38 Aligned_cols=94 Identities=27% Similarity=0.429 Sum_probs=79.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCc--------hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNAD--------KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESER 168 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (290)
.++|++.++|+.|+ ++++++||+. ...+...++++++. |+..+.+. ..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 45688888888875 7899999998 77888899999986 34443332 22
Q ss_pred CCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc-CCCCCcEEEEcC-CccchHHHHhcCCeEEEec
Q 036723 169 PTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA-NINPRKTIFFDD-SIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~-~~~~~e~i~iGD-s~~Di~~a~~aGi~~i~v~ 240 (290)
.||+++.|+.+++++ +++|+++++||| +.+|+.+|+++|+.+|++.
T Consensus 84 --------------------------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 --------------------------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred --------------------------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 699999999999999 599999999999 6899999999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.5e-16 Score=134.40 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=80.5
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCC----chHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNA----DKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~----~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
....+.+++.++|+.++ ++++++||. ....+..+++.+|+..+|+.+++.+....
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------ 172 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------ 172 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC------------------
Confidence 44577788999999985 789999998 66678888889999999998888775543
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.||++. .+++++++ ++||||+.+|+.+|+++|+.++.+.++..
T Consensus 173 -------------------------~Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 173 -------------------------YQYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred -------------------------CCCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 477664 35677776 79999999999999999999999987764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.8e-17 Score=132.71 Aligned_cols=104 Identities=18% Similarity=0.256 Sum_probs=91.7
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCC-chHHHHHHHHhcCCC---------CcceeEEeecccCCCCCCcccccccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNA-DKTHAARVLSRLGLE---------DCFERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~-~~~~~~~~l~~~gl~---------~~f~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
..+.++||+.++|+.|+ ++++++||. ....+...++.+++. .+|+.+++++....
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------ 109 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------ 109 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence 45678999999999996 789999998 888889999999998 99999999876432
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc--CCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA--NINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~--~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
.||.+.+++.+.+.+ |++|++|+||||+..|+++|+++|+.++++.+
T Consensus 110 -------------------------------~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 110 -------------------------------AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred -------------------------------HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 578888888888887 89999999999999999999999999999988
Q ss_pred CC
Q 036723 242 SH 243 (290)
Q Consensus 242 ~~ 243 (290)
+.
T Consensus 159 g~ 160 (174)
T TIGR01685 159 GM 160 (174)
T ss_pred Cc
Confidence 76
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7e-17 Score=141.69 Aligned_cols=232 Identities=18% Similarity=0.177 Sum_probs=145.4
Q ss_pred ccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH-cCCCCCHHH---
Q 036723 10 VSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA-IGYQFDCDD--- 85 (290)
Q Consensus 10 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~--- 85 (290)
..+..+++++||+||||+++...+..+.. .++. ++..|++....+.... +........+.. .+.+..++.
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~~~ipga~e-~l~~--L~~~g~~~iflTNn~~---~s~~~~~~~L~~~~~~~~~~~~i~T 76 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGNEAIPGAAE-ALKR--LKAAGKPVIFLTNNST---RSREVVAARLSSLGGVDVTPDDIVT 76 (269)
T ss_pred chhhhcCEEEEcCcCceEeCCccCchHHH-HHHH--HHHcCCeEEEEeCCCC---CCHHHHHHHHHhhcCCCCCHHHeec
Confidence 45677999999999999997777766543 4443 4455655443220000 000001111122 122222222
Q ss_pred ----HHHHHhhcCCCCCC--CCChhHHHHHHcCCCcE----------EEEeCCchHHH----HHHHHhcCCCCcceeEEe
Q 036723 86 ----FHSYVHGRLPYMML--KPDPVLRNLLLSLPIRK----------VIFTNADKTHA----ARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 86 ----~~~~~~~~~~~~~~--~~~pg~~~~L~~L~~~~----------~ivT~~~~~~~----~~~l~~~gl~~~f~~i~~ 145 (290)
..+++.+......+ .=.+++.+.|+.++..+ +++-+-++... ...+.... .-...|.+
T Consensus 77 S~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~--~g~~fI~t 154 (269)
T COG0647 77 SGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIA--AGAPFIAT 154 (269)
T ss_pred HHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHH--cCCcEEEe
Confidence 23344443321222 12567778887775211 12222222111 11111111 11223333
Q ss_pred ecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-c
Q 036723 146 FETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-R 224 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~ 224 (290)
.. +..++...+..+.+|++.......+-+.+.++|||.+.+|+.++++++.+++++++|||++ +
T Consensus 155 Np---------------D~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~T 219 (269)
T COG0647 155 NP---------------DLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDT 219 (269)
T ss_pred CC---------------CccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchh
Confidence 22 3446777779999999988888887788789999999999999999999999999999999 8
Q ss_pred chHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHHHHhHH
Q 036723 225 NLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 225 Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~~~l~~ 264 (290)
||.+|+++||.+++|.+|-. ...|+++.+|+.++...+..
T Consensus 220 DI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~ 267 (269)
T COG0647 220 DILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKE 267 (269)
T ss_pred hHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhc
Confidence 99999999999999988854 45689999999999886654
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.7e-16 Score=129.01 Aligned_cols=101 Identities=18% Similarity=0.284 Sum_probs=85.7
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCc---------------hHHHHHHHHhcCCCCcceeEE-e----ecccCCCCCC
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNAD---------------KTHAARVLSRLGLEDCFERII-S----FETLNSTDKG 155 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~---------------~~~~~~~l~~~gl~~~f~~i~-~----~~~~~~~~~~ 155 (290)
+.++||+.++|+.|+ ++++++||.. ...+...++.+|+. |+.++ + +++.+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~---- 101 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC---- 101 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC----
Confidence 477899999999995 7899999963 45677788999996 77654 4 244332
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
.||++.+++.+++++++++++++||||+.+|+++|+++|+.
T Consensus 102 ---------------------------------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 102 ---------------------------------------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred ---------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 79999999999999999999999999999999999999999
Q ss_pred EEEecCCCC
Q 036723 236 TVWVGTSHR 244 (290)
Q Consensus 236 ~i~v~~~~~ 244 (290)
++++.+++.
T Consensus 143 ~i~~~~~~~ 151 (161)
T TIGR01261 143 GIQYDEEEL 151 (161)
T ss_pred EEEEChhhc
Confidence 999988764
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=133.86 Aligned_cols=88 Identities=14% Similarity=0.114 Sum_probs=69.9
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC-----
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----- 244 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----- 244 (290)
++...++.+.+.........+...+||+|++|+.++++++++++++++|||++ +||.+|+++|+.++++.++..
T Consensus 153 ~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~ 232 (249)
T TIGR01457 153 GLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEV 232 (249)
T ss_pred CCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHH
Confidence 44445555544444444445556789999999999999999999999999998 899999999999999988753
Q ss_pred -C--CCcceeecCHhHH
Q 036723 245 -A--EGVDYALESIHNI 258 (290)
Q Consensus 245 -~--~~ad~v~~sl~el 258 (290)
. ..|+++++++.++
T Consensus 233 ~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 233 AGLPIAPTHVVSSLAEW 249 (249)
T ss_pred hcCCCCCCEEeCChhhC
Confidence 1 4688999888764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.3e-15 Score=126.47 Aligned_cols=193 Identities=13% Similarity=0.100 Sum_probs=115.8
Q ss_pred cEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhcCC
Q 036723 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLP 95 (290)
Q Consensus 16 k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (290)
.+++|||||||++. .| . .+....|.............+..+....-.+... ...+.+.+.+.+
T Consensus 2 ~la~FDlD~TLi~~---~w---~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~----- 64 (203)
T TIGR02137 2 EIACLDLEGVLVPE---IW---I-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVI----- 64 (203)
T ss_pred eEEEEeCCcccHHH---HH---H-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHH-----
Confidence 36999999999973 22 2 3455666433221110011111111111111110 134455554444
Q ss_pred CCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 96 YMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 96 ~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..++++||+.++++.++ .+++|+|++....+..+++++|+..+|......++.+.-.+
T Consensus 65 -~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG------------------- 124 (203)
T TIGR02137 65 -ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVG------------------- 124 (203)
T ss_pred -HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeEC-------------------
Confidence 33578999999999886 68999999999999999999999887765333221010000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-CCCcc-ee
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-AEGVD-YA 251 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~~~ad-~v 251 (290)
. ....++.+..+...+++.+. ++++||||.||+.|++.+|++.++...+.- ...++ -+
T Consensus 125 -----------~------~~~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~ 184 (203)
T TIGR02137 125 -----------Y------QLRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA 184 (203)
T ss_pred -----------e------eecCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCc
Confidence 0 00123333333333456553 799999999999999999998777766543 22233 34
Q ss_pred ecCHhHHHHHhHHH
Q 036723 252 LESIHNIKEALPEL 265 (290)
Q Consensus 252 ~~sl~el~~~l~~~ 265 (290)
+.+.+||++.+.+.
T Consensus 185 ~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 185 VHTYEDLKREFLKA 198 (203)
T ss_pred ccCHHHHHHHHHHH
Confidence 67888888877654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-15 Score=124.61 Aligned_cols=94 Identities=21% Similarity=0.287 Sum_probs=77.4
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchH------------HHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKT------------HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
++||+.++|+.|+ ++++|+||++.. .+..+++++|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 5689999998885 789999998763 467788999985 355555543221
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEcCCc--------cchHHHHhcCCe
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN--INPRKTIFFDDSI--------RNLETGKRLGLH 235 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~--~~~~e~i~iGDs~--------~Di~~a~~aGi~ 235 (290)
+||+|+.++.+++++| +++++++||||+. +|+++|+++|+.
T Consensus 107 -----------------------------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 107 -----------------------------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred -----------------------------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 6999999999999999 9999999999996 699999999999
Q ss_pred EEEe
Q 036723 236 TVWV 239 (290)
Q Consensus 236 ~i~v 239 (290)
+++-
T Consensus 158 ~~~~ 161 (166)
T TIGR01664 158 FKYP 161 (166)
T ss_pred cCCh
Confidence 8764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1e-14 Score=121.90 Aligned_cols=111 Identities=13% Similarity=0.105 Sum_probs=80.2
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+++.||+.++|+.|+ ++++++||+....+...++++++..+|+.+++.+...... +.+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~-----------------g~~~~ 133 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDND-----------------GRHIV 133 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCC-----------------CcEEE
Confidence 578899999999885 7899999999999999999999999999998866432110 00000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
...-|.-+ . +...+.+|+..++.+++++ ++++++|||+.+|+++|+++++.
T Consensus 134 ~~~~~~~~-----~-~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 134 WPHHCHGC-----C-SCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred ecCCCCcc-----C-cCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 00000000 0 0112556688999888765 78999999999999999999764
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-15 Score=132.00 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=71.3
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC------
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR------ 244 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~------ 244 (290)
+...+|.+.+....-...++.+++||+|++++.+++++++++++|++|||++ +|+.+|+++|+.++++.+|..
T Consensus 150 ~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~ 229 (248)
T PRK10444 150 FYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDID 229 (248)
T ss_pred CcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHh
Confidence 4455555444444444455566799999999999999999999999999998 899999999999999988753
Q ss_pred --CCCcceeecCHhHH
Q 036723 245 --AEGVDYALESIHNI 258 (290)
Q Consensus 245 --~~~ad~v~~sl~el 258 (290)
..+|+++++|+.+|
T Consensus 230 ~~~~~pd~~~~sl~el 245 (248)
T PRK10444 230 SMPFRPSWIYPSVADI 245 (248)
T ss_pred cCCCCCCEEECCHHHh
Confidence 25799999999887
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.62 E-value=2e-15 Score=118.53 Aligned_cols=116 Identities=23% Similarity=0.315 Sum_probs=90.9
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
....++|++.++|+.|+ +.++++|++....+...++++++..+|+.+++.+....... .....
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------~~~~~ 86 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP--------------KEGLF 86 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--------------ccccc
Confidence 55688899999999886 67999999999999999999999888888887664432100 00000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
........+||++..++.++++++.+++++++|||+.+|+++++.+|+.++++
T Consensus 87 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 87 -------------LGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred -------------ccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 01111223699999999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.6e-16 Score=136.88 Aligned_cols=65 Identities=29% Similarity=0.432 Sum_probs=58.1
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------------CCCcceeecCHhHH
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------------AEGVDYALESIHNI 258 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------------~~~ad~v~~sl~el 258 (290)
.+||+|..++.+++++|+++++|+||||++ +||.+|+++|+.++++.+|.. ..+|+++++++.||
T Consensus 200 ~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 200 VGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred cCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 489999999999999999999999999996 999999999999999988753 13689999998764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.4e-16 Score=139.62 Aligned_cols=72 Identities=17% Similarity=0.149 Sum_probs=63.8
Q ss_pred CCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC----------CCCcceeecCHhHHH
Q 036723 191 TPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----------AEGVDYALESIHNIK 259 (290)
Q Consensus 191 ~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----------~~~ad~v~~sl~el~ 259 (290)
+.+++||+|.+|+.+++++++++++++||||++ +||.+|+++|++++++.+|.. ...|+++++++.+|.
T Consensus 225 ~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~ 304 (311)
T PLN02645 225 PLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFL 304 (311)
T ss_pred cccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHH
Confidence 344689999999999999999999999999998 999999999999999987742 146899999999998
Q ss_pred HHh
Q 036723 260 EAL 262 (290)
Q Consensus 260 ~~l 262 (290)
+++
T Consensus 305 ~~~ 307 (311)
T PLN02645 305 TLK 307 (311)
T ss_pred HHh
Confidence 754
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.6e-15 Score=124.99 Aligned_cols=190 Identities=14% Similarity=0.125 Sum_probs=121.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHH---HHcccHHHHHHcCCCCCHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYK---FYGTTLAGLRAIGYQFDCDDFHSY 89 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~ 89 (290)
++.++++|||||||++ ...+. .+....|....... ....... .+..............+.+...+.
T Consensus 3 ~~~~L~vFD~D~TLi~-----~~~~~-----~~~~~~g~~~~v~~-~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~ 71 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-----AELID-----ELARGAGVGEEVLA-ITERAMRGELDFEESLRLRVALLKGLPVEVLEEV 71 (212)
T ss_pred CccceEEEecccchhh-----HHHHH-----HHHHHhCCHHHHHH-HHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4578999999999999 22221 34555555433221 1111111 111111111122223334434433
Q ss_pred HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 90 VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 90 ~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
..+. +++.||+.++++.++ .+++|+|++....++++.+++|++..+.+.+..++ +.-++
T Consensus 72 ~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~ltG------------ 133 (212)
T COG0560 72 REEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLTG------------ 133 (212)
T ss_pred HHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEec------------
Confidence 3222 688899999998886 88999999999999999999999988887776664 21000
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCC
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAE 246 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~ 246 (290)
.+..+.+.++-|...++.+++++|+++++++++|||.||+.|.+.+|.+.+....+....
T Consensus 134 --------------------~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~ 193 (212)
T COG0560 134 --------------------RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA 193 (212)
T ss_pred --------------------eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH
Confidence 011111124677899999999999999999999999999999999999765554444333
Q ss_pred Cccee
Q 036723 247 GVDYA 251 (290)
Q Consensus 247 ~ad~v 251 (290)
.++..
T Consensus 194 ~a~~~ 198 (212)
T COG0560 194 LADVR 198 (212)
T ss_pred HHHHh
Confidence 33333
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.8e-15 Score=125.99 Aligned_cols=125 Identities=13% Similarity=0.100 Sum_probs=86.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc---eeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF---ERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
.+.+.||+.++++.|+ ++++|+|++....++.+++.++....+ +.++..+.+..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~-------------------- 127 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI-------------------- 127 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------------
Confidence 3688899999999885 789999999999999999887543322 11222211110
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHH----------HHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAF----------EQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~----------~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
.||+|..+ ..++++++..+++++||||+.+|+++|+.||+ +++..
T Consensus 128 -----------------------~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~ 182 (214)
T TIGR03333 128 -----------------------DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARD 182 (214)
T ss_pred -----------------------eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehH
Confidence 23332222 24556666688899999999999999999998 33322
Q ss_pred C-----CCCCCcceeecCHhHHHHHhHHHHH
Q 036723 242 S-----HRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 242 ~-----~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
. .....+...++++.|+.+.|.+.|+
T Consensus 183 ~l~~~~~~~~~~~~~~~~f~di~~~l~~~~~ 213 (214)
T TIGR03333 183 YLLNECEELGLNHAPFQDFYDVRKELENVKE 213 (214)
T ss_pred HHHHHHHHcCCCccCcCCHHHHHHHHHHHhc
Confidence 1 1233467778999999999988775
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-14 Score=118.57 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=91.0
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+.-+++++|+||.+...+...++++|+..+|+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~------------------------------------------ 73 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG------------------------------------------ 73 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec------------------------------------------
Confidence 34444555588999999999999999999998766541
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH---HH
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN---IK 259 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e---l~ 259 (290)
.+|+++.++.+++++|+++++|++|||+.+|+.+++.+|+. +++.++.. ...+++++.+... +.
T Consensus 74 ----------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~ 142 (154)
T TIGR01670 74 ----------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVR 142 (154)
T ss_pred ----------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHH
Confidence 37788999999999999999999999999999999999996 66665543 5568999887654 77
Q ss_pred HHhHHHHHhh
Q 036723 260 EALPELWEVA 269 (290)
Q Consensus 260 ~~l~~~~~~~ 269 (290)
+++.++++.-
T Consensus 143 ~~~~~~~~~~ 152 (154)
T TIGR01670 143 EVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHhh
Confidence 7777777654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=113.86 Aligned_cols=93 Identities=22% Similarity=0.284 Sum_probs=76.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCc-hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNAD-KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.++|++.++|+.|+ ++++++||+. ...+...++.+++..++ +.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~------------------------ 89 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA------------------------ 89 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC------------------------
Confidence 44577777777775 7899999998 56666666777654211 11
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.||+|++|..++++++++++++++|||+. .|+.+|+++|+.++++.++..
T Consensus 90 -------------------~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 90 -------------------VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred -------------------CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 69999999999999999999999999999 799999999999999988764
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-14 Score=119.73 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=86.4
Q ss_pred HHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCC
Q 036723 107 NLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADL 186 (290)
Q Consensus 107 ~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (290)
..|+..+++++|+||.....+...++.+++..+|+.
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-------------------------------------------- 79 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-------------------------------------------- 79 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------------------
Confidence 445555689999999999999999999999877752
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-CCCcceeecCHh---HHHHHh
Q 036723 187 ELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-AEGVDYALESIH---NIKEAL 262 (290)
Q Consensus 187 ~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~~~ad~v~~sl~---el~~~l 262 (290)
.||+|+.++.+++++++++++|++|||+.||+.|++.+|+..+..+.... +..+++++.+-. -+.+++
T Consensus 80 --------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~ 151 (169)
T TIGR02726 80 --------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVA 151 (169)
T ss_pred --------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHH
Confidence 37888999999999999999999999999999999999997665544332 556788765422 234444
Q ss_pred HHHHHhh
Q 036723 263 PELWEVA 269 (290)
Q Consensus 263 ~~~~~~~ 269 (290)
..++...
T Consensus 152 e~il~~~ 158 (169)
T TIGR02726 152 ELILKAQ 158 (169)
T ss_pred HHHHHhc
Confidence 5555544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=126.29 Aligned_cols=111 Identities=17% Similarity=0.297 Sum_probs=87.2
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCC---------------chHHHHHHHHhcCCCCcceeEEee-----cccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNA---------------DKTHAARVLSRLGLEDCFERIISF-----ETLNSTDK 154 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~---------------~~~~~~~~l~~~gl~~~f~~i~~~-----~~~~~~~~ 154 (290)
...++||+.++|+.|+ ++++|+||. .......+++.+++. |+.++.+ ++..
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~---- 101 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCS---- 101 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCC----
Confidence 3678899999999986 789999995 244556677888884 6665433 2222
Q ss_pred CccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 155 GTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
.+||+|.++..+++++++++++++||||+.+|+++|+++|+
T Consensus 102 ---------------------------------------~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi 142 (354)
T PRK05446 102 ---------------------------------------CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGI 142 (354)
T ss_pred ---------------------------------------CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCC
Confidence 27999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCCcceeecCHhHHHHHh
Q 036723 235 HTVWVGTSHRAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 235 ~~i~v~~~~~~~~ad~v~~sl~el~~~l 262 (290)
++|+++... + +++++.+.|
T Consensus 143 ~~I~v~~~~------~---~~~~i~~~l 161 (354)
T PRK05446 143 KGIRYARET------L---NWDAIAEQL 161 (354)
T ss_pred eEEEEECCC------C---CHHHHHHHH
Confidence 999995532 1 456666654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=116.46 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=81.3
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee-EEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER-IISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++|++.++++.++ .+++|+|++....++.+++++|+...|.. +...++-...++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~-------------------- 145 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGN-------------------- 145 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCC--------------------
Confidence 467899999998875 68999999999999999999999877655 222121000000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
+ ..+...+++|...++.++++.++++++++++|||.+|+++++.+|.+++..
T Consensus 146 -------~------~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 146 -------I------DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -------c------cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 0 000012678889999999999999999999999999999999999865443
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-13 Score=118.99 Aligned_cols=109 Identities=15% Similarity=0.155 Sum_probs=82.5
Q ss_pred HHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCc----hHHHHHHHHhcCC--CCcceeEEeecccCCCC
Q 036723 83 CDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNAD----KTHAARVLSRLGL--EDCFERIISFETLNSTD 153 (290)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~----~~~~~~~l~~~gl--~~~f~~i~~~~~~~~~~ 153 (290)
...|++.+.+.. .....|+||+.++|+.|+ .+++++||.. ......+++.+|+ ..+|+.+++.+..
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---- 172 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---- 172 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC----
Confidence 444555555542 345789999999999995 7899999953 4456666777999 7888887776532
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
.||++.. +++++++ +++|||+.+|+.+|++||
T Consensus 173 -----------------------------------------~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AG 204 (237)
T PRK11009 173 -----------------------------------------GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAG 204 (237)
T ss_pred -----------------------------------------CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcC
Confidence 3665543 5566776 999999999999999999
Q ss_pred CeEEEecCCCC
Q 036723 234 LHTVWVGTSHR 244 (290)
Q Consensus 234 i~~i~v~~~~~ 244 (290)
+.+|.+.++..
T Consensus 205 i~~I~v~~G~~ 215 (237)
T PRK11009 205 ARGIRILRAAN 215 (237)
T ss_pred CcEEEEecCCC
Confidence 99999988764
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=122.56 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=55.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+..|+.+++.+++++|++++++++|||+.||++|++.+|+..+ ++++.. +..|++++.+.++ +.++|.++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~va-mgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVA-MGNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEE-ecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 4567899999999999999999999999999999999998544 444433 5568999877554 66666554
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-12 Score=111.19 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=107.4
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcC--C---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSL--P---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L--~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
...+++.+.+ ..+++.||+.++++.+ + ..+.|+|++...+++.+|++.|+...|+.|++....
T Consensus 58 vt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~------ 125 (234)
T PF06888_consen 58 VTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPAC------ 125 (234)
T ss_pred CCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCce------
Confidence 4566666555 5678899999999988 2 669999999999999999999999999999885422
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH---cCCCCCcEEEEcCCccchHHHHhc
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKI---ANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~---~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
+...+...+.+...+-|..++.++++ ...++.+++. -|..-++++||||+.||+.++...
T Consensus 126 --------~~~~G~l~v~pyh~h~C~~C~~NmCK---------~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L 188 (234)
T PF06888_consen 126 --------FDADGRLRVRPYHSHGCSLCPPNMCK---------GKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRL 188 (234)
T ss_pred --------ecCCceEEEeCccCCCCCcCCCccch---------HHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccccc
Confidence 11122222223333444444433433 3677777776 377789999999999999999997
Q ss_pred CCe-EEEecCCCC----------CCCcc-eeecCHhHHHHHhHHH
Q 036723 233 GLH-TVWVGTSHR----------AEGVD-YALESIHNIKEALPEL 265 (290)
Q Consensus 233 Gi~-~i~v~~~~~----------~~~ad-~v~~sl~el~~~l~~~ 265 (290)
+-. .++...++. ...|. ..+.+=.||.+.|.++
T Consensus 189 ~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 189 RPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQL 233 (234)
T ss_pred CCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhh
Confidence 765 555555542 11233 2366777777776654
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.5e-13 Score=115.21 Aligned_cols=100 Identities=18% Similarity=0.336 Sum_probs=81.2
Q ss_pred HcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCC
Q 036723 110 LSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELP 189 (290)
Q Consensus 110 ~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (290)
+.-+++++++||.....+...++.+|+..+|+ +
T Consensus 61 ~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g--------------------------------------- 93 (183)
T PRK09484 61 LTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G--------------------------------------- 93 (183)
T ss_pred HHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C---------------------------------------
Confidence 33447889999999999999999999876653 1
Q ss_pred CCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec------CHhHHHHH
Q 036723 190 RTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE------SIHNIKEA 261 (290)
Q Consensus 190 ~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~------sl~el~~~ 261 (290)
.++++..++.+++++|+++++++||||+.+|+.+++++|+.++ ++++.. ...+++++. .+.|+.+.
T Consensus 94 -----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 94 -----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred -----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHH
Confidence 3667899999999999999999999999999999999999844 554432 456889886 57777765
Q ss_pred h
Q 036723 262 L 262 (290)
Q Consensus 262 l 262 (290)
|
T Consensus 168 i 168 (183)
T PRK09484 168 L 168 (183)
T ss_pred H
Confidence 4
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-13 Score=119.38 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=55.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+..|+.+++.+++++|++++++++|||+.||++|++.+|+.++ ++++.. +..+++++.+.++ +.+.|.++
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va-m~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~ 228 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVA-VANADEELKEAADYVTEKSYGEGVAEAIEHL 228 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEE-ecCccHHHHHhcceEecCCCcChHHHHHHHH
Confidence 6778999999999999999999999999999999999999654 444443 5568888876443 55555544
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-13 Score=113.53 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=77.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+.+.||+.++++.++ .+++|+|++....++.+++.+|+...|...+..++-+...+ +.
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g------------~~------ 132 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTG------------PI------ 132 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeC------------cc------
Confidence 3567899999999885 78999999999999999999999877776655432111000 00
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
..++...+..|+..++.++++++++++++++||||.+|+.+++.+
T Consensus 133 -------------~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 133 -------------EGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -------------CCcccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000011256678899999999999999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.3e-14 Score=116.07 Aligned_cols=93 Identities=17% Similarity=0.104 Sum_probs=82.7
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+.++||+.++|+.|+ ++++|+|++....++.+++++++.. +|+.+++.++...
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~----------------------- 99 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF----------------------- 99 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc-----------------------
Confidence 4577899999999997 7799999999999999999999865 5688999887764
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+||+ |..+++++|++|++|++|||+.+|+.+++++|+..
T Consensus 100 --------------------~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 100 --------------------VKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred --------------------cCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 6886 88899999999999999999999999999999864
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.2e-13 Score=107.63 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=73.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCC-chHHHHHHHHhcC-------CCCcceeEEeecccCCCCCCccccccccccCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNA-DKTHAARVLSRLG-------LEDCFERIISFETLNSTDKGTVLVDQDASESER 168 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~-~~~~~~~~l~~~g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (290)
.++||+.++|+.|+ ++++++||+ ........++.++ +..+|+.+++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~--------------------- 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY--------------------- 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC---------------------
Confidence 56789999999885 789999999 8888888889888 778888877764
Q ss_pred CCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEcCCccchHHHHh
Q 036723 169 PTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN--INPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~--~~~~e~i~iGDs~~Di~~a~~ 231 (290)
.+|+|..|..+++++| ++|++|++|||+..|++..+.
T Consensus 88 --------------------------~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 88 --------------------------WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred --------------------------CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 4788999999999999 999999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=119.35 Aligned_cols=71 Identities=8% Similarity=0.101 Sum_probs=59.8
Q ss_pred CCCCCCcHHHHHHHHHHc--------CC-----CCCcEEEEcCCc-cchHHHHhcCCeEEEecCCC-C------CCCcce
Q 036723 192 PVVCKPFEEAFEQVFKIA--------NI-----NPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSH-R------AEGVDY 250 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~--------~~-----~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~-~------~~~ad~ 250 (290)
.++|||++.+|+.+++.+ +. ++++++||||++ +||.+|+++||.+++|.+|. . ...|++
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL 308 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence 357999999999988877 43 457999999999 99999999999999998862 1 235899
Q ss_pred eecCHhHHHHHh
Q 036723 251 ALESIHNIKEAL 262 (290)
Q Consensus 251 v~~sl~el~~~l 262 (290)
+++|+.|+...|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999988754
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.4e-13 Score=106.54 Aligned_cols=89 Identities=30% Similarity=0.519 Sum_probs=74.9
Q ss_pred hhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccC
Q 036723 103 PVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYC 179 (290)
Q Consensus 103 pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
|.+.+.++.++ .++.|+||+....+....+.+|+. .|...
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A--------------------------------- 91 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYRA--------------------------------- 91 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeecc---------------------------------
Confidence 44444444443 788999999999999999999864 44332
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCC
Q 036723 180 SRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 180 ~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~ 243 (290)
.||.+..|+.+++++++++++|++|||.+ +|+.+++.+|+.+|.|..=.
T Consensus 92 ---------------~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 92 ---------------KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred ---------------cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEec
Confidence 69999999999999999999999999999 89999999999999996643
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.6e-13 Score=96.26 Aligned_cols=65 Identities=25% Similarity=0.415 Sum_probs=59.8
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHH
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDS-IRNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNI 258 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs-~~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el 258 (290)
.+||+|.+++.++++++++++++++|||+ .+||.+|+++|+.++++.++.. ..+|+++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 48999999999999999999999999999 6999999999999999988763 35899999999885
|
... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-13 Score=114.75 Aligned_cols=87 Identities=21% Similarity=0.334 Sum_probs=74.3
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.++.|++.++|+.|+ ++++++|+.....+..+.+.+|+. +.++.+...
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~-------------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI-------------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE--------------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc--------------------------
Confidence 467899999999986 679999999999999999999984 333333210
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+||.+.++..+++.+++++++|+||||+.||+.|+++||
T Consensus 177 -------------------~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 -------------------GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------------------TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------------------ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 299999999999999999999999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.5e-13 Score=120.14 Aligned_cols=108 Identities=17% Similarity=0.164 Sum_probs=89.4
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++|++.++|+.|+ ++++++||.+.......++.+++.. +|+.+++.+....
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~----------------------- 242 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH----------------------- 242 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh-----------------------
Confidence 467899999999885 7899999999999999999999986 8998887762110
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCC-CCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANI-NPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~-~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.++. ..-+||+|..+..++++++. ++++|++|||+.+|+++|+++|+.++++.+|
T Consensus 243 ------------~~~~-~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 243 ------------FQRE-QGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred ------------hccc-CCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 0000 00169999999999999998 6799999999999999999999999999776
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.9e-13 Score=115.22 Aligned_cols=96 Identities=21% Similarity=0.202 Sum_probs=81.8
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC-
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~- 244 (290)
+.+...++-.|++.+......-+.|-++|||.+.+++.++++++++|++|+||||++ +||.-++++|++++++.+|-.
T Consensus 195 ~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~ 274 (306)
T KOG2882|consen 195 PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTT 274 (306)
T ss_pred CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCc
Confidence 355566666677777777778888999999999999999999999999999999999 799999999999999987642
Q ss_pred -----------CCCcceeecCHhHHHHHh
Q 036723 245 -----------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 -----------~~~ad~v~~sl~el~~~l 262 (290)
...|||.++++.++.+.+
T Consensus 275 led~~~~~~~~~~~PDyy~~~l~d~~~~~ 303 (306)
T KOG2882|consen 275 LEDILEAQGDNKMVPDYYADSLGDLLPLL 303 (306)
T ss_pred HHHHHhcccccCCCCchHHhhHHHHhhhc
Confidence 345899999998887754
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.7e-13 Score=115.36 Aligned_cols=62 Identities=23% Similarity=0.196 Sum_probs=51.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN 257 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e 257 (290)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|+. +.++++.. +..+++++.+..+
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCChhHHHHHhcCeecCCCCC
Confidence 57888999999999999999999999999999999999996 44444433 5678888876443
|
catalyze the same reaction as SPP. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.3e-12 Score=111.71 Aligned_cols=48 Identities=25% Similarity=0.399 Sum_probs=43.7
Q ss_pred CCCCcHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHhcCCeEEEecC
Q 036723 194 VCKPFEEAFEQVFKIANIN-PRKTIFFDDSI-RNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~ 241 (290)
.+||+|..|+.++++++.. +++++||||++ +|+.+|+++|+.++++.+
T Consensus 193 ~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 193 SGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 4899999999999999975 67899999996 999999999999999853
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.2e-12 Score=110.69 Aligned_cols=60 Identities=15% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCcceeecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYALES 254 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v~~s 254 (290)
+..|..+++.+++++|++++++++|||+.||++|++.+|+.+++.+... -+..+++++.+
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSN 205 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCC
Confidence 5677889999999999999999999999999999999998655443322 25567888765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.5e-12 Score=105.54 Aligned_cols=73 Identities=16% Similarity=0.319 Sum_probs=62.1
Q ss_pred CCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHHHHh
Q 036723 192 PVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~~~l 262 (290)
+++|||++..|+.+++.+|++|++++||||.. .|+-.|..+||..+.|.+|.- ...|+.+.+++.|--++|
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I 256 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI 256 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence 56799999999999999999999999999999 589999999999999977641 345777788877777665
Q ss_pred HH
Q 036723 263 PE 264 (290)
Q Consensus 263 ~~ 264 (290)
.+
T Consensus 257 ~q 258 (262)
T KOG3040|consen 257 IQ 258 (262)
T ss_pred Hh
Confidence 43
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.1e-11 Score=105.13 Aligned_cols=70 Identities=16% Similarity=0.068 Sum_probs=53.1
Q ss_pred CcHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHhcCCeEEEecCCCC-C----CCc-ceee--cC--HhHHHHHhHHH
Q 036723 197 PFEEAFEQVFKIANINP-RKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-A----EGV-DYAL--ES--IHNIKEALPEL 265 (290)
Q Consensus 197 p~~~~~~~il~~~~~~~-~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~----~~a-d~v~--~s--l~el~~~l~~~ 265 (290)
.|..+++.+++++|+++ +++++|||+.||++|++.+|+.+++-+.... + ..+ +.++ ++ =+-+.+.|.++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 67789999999999999 9999999999999999999987665554433 3 223 4665 34 34666666665
Q ss_pred H
Q 036723 266 W 266 (290)
Q Consensus 266 ~ 266 (290)
+
T Consensus 270 ~ 270 (273)
T PRK00192 270 L 270 (273)
T ss_pred H
Confidence 4
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.27 E-value=1e-11 Score=108.19 Aligned_cols=51 Identities=22% Similarity=0.417 Sum_probs=46.9
Q ss_pred CCCCCCcHHHHHHHHHHcCCCCCcE-EEEcCCc-cchHHHHhcCCeEEEecCC
Q 036723 192 PVVCKPFEEAFEQVFKIANINPRKT-IFFDDSI-RNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~~~~~~e~-i~iGDs~-~Di~~a~~aGi~~i~v~~~ 242 (290)
.+.+||++..|+.++++++++++++ ++|||+. +||.+|+++|+.++++.+|
T Consensus 184 ~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 184 TVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 3468999999999999999998887 9999999 8999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-11 Score=101.16 Aligned_cols=194 Identities=16% Similarity=0.149 Sum_probs=115.2
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccH---HHHHH-c-CCCCCHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL---AGLRA-I-GYQFDCDDFH 87 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~---~~~~~-~-~~~~~~~~~~ 87 (290)
.+.++|+||+|.|++. .+.+. .++...|+...... .. .+.++-.. +.+.. + -......
T Consensus 14 ~~~~aVcFDvDSTvi~-eEgId---------elA~~~G~~~~Va~-~T---~rAMng~~~F~eaL~~Rl~llqp~~~--- 76 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQ-EEGID---------ELAAYCGVGEAVAE-VT---RRAMNGEADFQEALAARLSLLQPLQV--- 76 (227)
T ss_pred HhcCeEEEecCcchhH-HhhHH---------HHHHHhCchHHHHH-HH---HHHhCCCCcHHHHHHHHHHHhcccHH---
Confidence 4578999999999998 45444 26666676554432 11 11112111 11110 0 0111111
Q ss_pred HHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC--cceeEEeecccCCCCCCccccccc
Q 036723 88 SYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED--CFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 88 ~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+.+..+.+.+-||++++.+.|+ .+++++|++.+..+..+...+|+.. .|.+..-.+..+.
T Consensus 77 -qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------- 144 (227)
T KOG1615|consen 77 -QVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------- 144 (227)
T ss_pred -HHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------
Confidence 2222233356788899999999997 7799999999999999999999975 5655544443322
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
-.=||..+..+. +--++..++.+.+ +.+-+.++||||+.+|+++... |..+++.+.-
T Consensus 145 -------~~gfd~~~ptsd-------------sggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~ 201 (227)
T KOG1615|consen 145 -------YLGFDTNEPTSD-------------SGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGN 201 (227)
T ss_pred -------ccccccCCcccc-------------CCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCc
Confidence 111222221111 3345578887777 7777889999999999998877 3333333221
Q ss_pred C----CCCCcceeecCHhHH
Q 036723 243 H----RAEGVDYALESIHNI 258 (290)
Q Consensus 243 ~----~~~~ad~v~~sl~el 258 (290)
. -+..+++.+.++..|
T Consensus 202 ~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 202 VIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred eEcHhhHhccHHHHHHHHHH
Confidence 1 134455555555444
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.6e-11 Score=106.38 Aligned_cols=72 Identities=25% Similarity=0.257 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCcceeecC--HhHHHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYALES--IHNIKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v~~s--l~el~~~l~~~~ 266 (290)
+.-|..+++.+++++|++++++++|||+.||++|.+.+|...++-+... .+..+++++.+ =+.+.+.|.+++
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~ 261 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLL 261 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence 6888999999999999999999999999999999999998655444422 25556666555 345666666544
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.6e-12 Score=114.21 Aligned_cols=82 Identities=11% Similarity=0.099 Sum_probs=62.4
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcce--eecCHh--
Q 036723 183 NADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDY--ALESIH-- 256 (290)
Q Consensus 183 ~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~--v~~sl~-- 256 (290)
...+++++ +-.|..+++.+++++|++++++++|||+.||++|.+.+|.. +.++++.. +..|++ ++.+.+
T Consensus 178 ~~~eI~~~----g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~Na~~~vK~~A~~~~v~~~n~ed 252 (272)
T PRK15126 178 DCLEVLPV----GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG-FIMGNAMPQLRAELPHLPVIGHCRNQ 252 (272)
T ss_pred cEEEeecC----CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc-eeccCChHHHHHhCCCCeecCCCcch
Confidence 34456666 67889999999999999999999999999999999999985 55555443 445554 665544
Q ss_pred HHHHHhHHHHHhh
Q 036723 257 NIKEALPELWEVA 269 (290)
Q Consensus 257 el~~~l~~~~~~~ 269 (290)
-+.++|.+++...
T Consensus 253 Gva~~l~~~~~~~ 265 (272)
T PRK15126 253 AVSHYLTHWLDYP 265 (272)
T ss_pred HHHHHHHHHhcCC
Confidence 4777777776433
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-10 Score=106.05 Aligned_cols=130 Identities=20% Similarity=0.250 Sum_probs=87.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc-C-------CCCcceeEEeecccCCCCCCccccccccccC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL-G-------LEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~-g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
.+.+.||+.++|+.|+ ++++|+||.+...+...++.+ | +..+||.+++...=.. + |..
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~-------F----F~~ 250 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPG-------F----FTE 250 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCc-------c----cCC
Confidence 3566999999999986 789999999999999999996 7 7899999888653211 0 111
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-hcCCeEEEecC
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGK-RLGLHTVWVGT 241 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~-~aGi~~i~v~~ 241 (290)
..+...++...-..++.+.....++.+..- .-...+.+.+|+++++++||||++ .|+..++ .+||.++++-.
T Consensus 251 ~~pf~~v~~~~g~~~~~~~~~l~~g~vY~g---Gn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 251 GRPFRQVDVETGSLKWGEVDGLEPGKVYSG---GSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCceEEEeCCCCcccCCccccccCCCeEeC---CCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 122222222111111111111222212221 345677778899999999999999 8999998 99999999944
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8e-11 Score=104.20 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=58.5
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc--eeecCHhH--
Q 036723 184 ADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD--YALESIHN-- 257 (290)
Q Consensus 184 ~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad--~v~~sl~e-- 257 (290)
..+++++ +..|..+++.+++++|++++++++|||+.||++|.+.+|... +++++.. +..|+ +++.+.+|
T Consensus 181 ~~eI~~~----gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~v-Am~NA~~~vK~~A~~~~v~~~n~edG 255 (266)
T PRK10976 181 CLEVMAG----GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGC-IMGNAHQRLKDLLPELEVIGSNADDA 255 (266)
T ss_pred eEEEEcC----CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCe-eecCCcHHHHHhCCCCeecccCchHH
Confidence 3455555 678899999999999999999999999999999999999864 4444443 44554 67766544
Q ss_pred HHHHhHHHH
Q 036723 258 IKEALPELW 266 (290)
Q Consensus 258 l~~~l~~~~ 266 (290)
+.+.|.+++
T Consensus 256 Va~~l~~~~ 264 (266)
T PRK10976 256 VPHYLRKLY 264 (266)
T ss_pred HHHHHHHHh
Confidence 555555543
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.8e-11 Score=107.36 Aligned_cols=71 Identities=11% Similarity=0.128 Sum_probs=57.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~ 266 (290)
+..|..+++.+++++|++++++++|||+.||++|.+.+|...+ ++++.. +..|++++.+.++ +.+.|.+++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vA-m~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVA-MGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEE-ecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 6788899999999999999999999999999999999998644 444443 6678999877543 666665543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.4e-11 Score=105.77 Aligned_cols=73 Identities=11% Similarity=0.064 Sum_probs=58.7
Q ss_pred CCCcHHHHHHHHHHcCC---CCCcEEEEcCCccchHHHHhcCCeEEEecCC-C------CCCCcceeecCHh--HHHHHh
Q 036723 195 CKPFEEAFEQVFKIANI---NPRKTIFFDDSIRNLETGKRLGLHTVWVGTS-H------RAEGVDYALESIH--NIKEAL 262 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~---~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~-~------~~~~ad~v~~sl~--el~~~l 262 (290)
+-.|..+++.+++++|+ +++++++|||+.||++|.+.+|..+++-+.. . .+..+++++...+ .+.+.|
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 67889999999999999 9999999999999999999999865554332 1 1235788887755 777777
Q ss_pred HHHHH
Q 036723 263 PELWE 267 (290)
Q Consensus 263 ~~~~~ 267 (290)
..++.
T Consensus 265 ~~~~~ 269 (271)
T PRK03669 265 DHFFS 269 (271)
T ss_pred HHHHh
Confidence 77664
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=113.22 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=59.3
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HH
Q 036723 184 ADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IK 259 (290)
Q Consensus 184 ~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~ 259 (290)
..+++++ +..|..+++.+++++|++++++++|||+.||++|.+.+|.. ++++++.. +..|++|+.+.++ +.
T Consensus 498 ~lEI~p~----gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~g-VAMgNA~eeVK~~Ad~VT~sNdEDGVA 572 (580)
T PLN02887 498 MLEIVPP----GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLG-VALSNGAEKTKAVADVIGVSNDEDGVA 572 (580)
T ss_pred EEEEecC----CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCE-EEeCCCCHHHHHhCCEEeCCCCcCHHH
Confidence 3445555 68889999999999999999999999999999999999985 55555443 6668999876443 55
Q ss_pred HHhHH
Q 036723 260 EALPE 264 (290)
Q Consensus 260 ~~l~~ 264 (290)
++|.+
T Consensus 573 ~aLek 577 (580)
T PLN02887 573 DAIYR 577 (580)
T ss_pred HHHHH
Confidence 55544
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.6e-11 Score=108.20 Aligned_cols=87 Identities=17% Similarity=0.175 Sum_probs=77.0
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHh----cCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSR----LGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~----~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
++|++.++|+.|+ +.++|+|+++...+..+++. +++..+|+.+...
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~--------------------------- 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN--------------------------- 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---------------------------
Confidence 4678888888885 77899999999999999998 8888889887553
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
.||+++.++.+++++|+++++++||||+..|+.++++++-.
T Consensus 85 ---------------------~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ---------------------WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ---------------------cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 38999999999999999999999999999999999997753
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.3e-10 Score=98.73 Aligned_cols=122 Identities=14% Similarity=0.078 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCC
Q 036723 78 GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDK 154 (290)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~ 154 (290)
+..++.+.+.+.+.+ ..+.+.||+.++++.|+ ++++|+|++....++.+++.+|+...+..+++..-.....+
T Consensus 103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG 178 (277)
T TIGR01544 103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG 178 (277)
T ss_pred cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC
Confidence 344455555555532 45788999999999885 78999999999999999999998766666644321100000
Q ss_pred CccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCc-HHHHHHHHHHcC--CCCCcEEEEcCCccchHHHHh
Q 036723 155 GTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPF-EEAFEQVFKIAN--INPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~-~~~~~~il~~~~--~~~~e~i~iGDs~~Di~~a~~ 231 (290)
. ..| .+.|.+..-.| ...++...+.++ .++++|++||||.+|+.||..
T Consensus 179 -----------------v--ltG----------~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g 229 (277)
T TIGR01544 179 -----------------V--LKG----------FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADG 229 (277)
T ss_pred -----------------e--EeC----------CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcC
Confidence 0 000 00000001112 256667888888 899999999999999999877
Q ss_pred c
Q 036723 232 L 232 (290)
Q Consensus 232 a 232 (290)
+
T Consensus 230 ~ 230 (277)
T TIGR01544 230 V 230 (277)
T ss_pred C
Confidence 6
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.1e-10 Score=97.25 Aligned_cols=106 Identities=11% Similarity=-0.046 Sum_probs=69.6
Q ss_pred CCCChhHHHHH-HcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecc-cCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLL-LSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFET-LNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L-~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
+.++||+.+.| +.++ ++++|+||..+..++.++.++++.. .+.+++.+- ...+++ +
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~------------------~ 154 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGW------------------V 154 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccE------------------E
Confidence 56799999999 4553 6899999999999999999998632 334444331 100000 0
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.+.+ -.|.-|...++..+ +.+...+.+.|||.+|+.|...+|-+ ++|+..
T Consensus 155 -----~g~~----------c~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vnp~ 204 (211)
T PRK11590 155 -----LTLR----------CLGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHR-WRVTPR 204 (211)
T ss_pred -----CCcc----------CCChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCC-EEECcc
Confidence 0000 11344444444444 56777889999999999999999974 555543
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.1e-10 Score=92.56 Aligned_cols=65 Identities=20% Similarity=0.293 Sum_probs=55.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----CCCcceeecCHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-----AEGVDYALESIHNIK 259 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-----~~~ad~v~~sl~el~ 259 (290)
+||++.+++.++++++++++..++|||+++|+++|.++|+..+.+.++.. ....+++..++.++.
T Consensus 104 RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 104 RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 79999999999999999999999999999999999999999877766543 223567777777776
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-09 Score=88.20 Aligned_cols=197 Identities=13% Similarity=0.187 Sum_probs=126.0
Q ss_pred CCccEEEEecCCCcccCC---CChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccH--HHHHHc-------CC-
Q 036723 13 QKYDCLLFDLDDTIYPLT---SGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL--AGLRAI-------GY- 79 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~---~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~--~~~~~~-------~~- 79 (290)
.+.|++++|+.||....+ +.+++...+.+..++.+..+.++. ........+..|... +.+.++ +.
T Consensus 2 ~m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v--~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K 79 (229)
T COG4229 2 VMVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEV--KKIVDEVLSEFGIANSEEALVALLLEWIAEDSK 79 (229)
T ss_pred cchhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChh--hHHHHHHHHHhCccchHHHHHHHHHHHHhcccc
Confidence 346999999999998633 345566666666655555444332 223344445555443 211111 10
Q ss_pred CCCHHHHHHHHhhc-C--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc---CCCCcceeEEeecccC
Q 036723 80 QFDCDDFHSYVHGR-L--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL---GLEDCFERIISFETLN 150 (290)
Q Consensus 80 ~~~~~~~~~~~~~~-~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~ 150 (290)
......+.-.+... . ..-+..++|++.+.+++.+ .+++|+|+++...++..+.+. ++..+|++.+-. +.+
T Consensus 80 ~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG 158 (229)
T COG4229 80 DTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG 158 (229)
T ss_pred cchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc
Confidence 01111111111111 1 0114578999999998775 889999999988877666444 344566665433 122
Q ss_pred CCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 151 STDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
.|.....|..+++..|++|.+++|+.|.+..+.+|+
T Consensus 159 --------------------------------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~ 194 (229)
T COG4229 159 --------------------------------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAA 194 (229)
T ss_pred --------------------------------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHH
Confidence 577889999999999999999999999999999999
Q ss_pred hcCCeEEEecCCCCCCCc----ceeecCHh
Q 036723 231 RLGLHTVWVGTSHRAEGV----DYALESIH 256 (290)
Q Consensus 231 ~aGi~~i~v~~~~~~~~a----d~v~~sl~ 256 (290)
.+|+.++.+.++....-+ ..+++|+.
T Consensus 195 ~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 195 GVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred hcchheeeeecCCCCCCCCCcCceeeechh
Confidence 999999988765542222 35566665
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.1e-10 Score=104.95 Aligned_cols=97 Identities=19% Similarity=0.178 Sum_probs=75.2
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..++..|++.++++.++ .+++++|+.++..++.+++++|+ |+.+++++.....
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~--------------------- 124 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNL--------------------- 124 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcccc---------------------
Confidence 34567899999999986 67999999999999999999987 8999988754420
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.++||++. +.+.++ .++++++||+.+|+.+++.+| ..+.|+.+.
T Consensus 125 --------------------kg~~K~~~---l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 125 --------------------KGAAKAAA---LVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred --------------------CCchHHHH---HHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 13444444 335554 356899999999999999999 577777664
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.3e-10 Score=92.73 Aligned_cols=217 Identities=12% Similarity=0.104 Sum_probs=127.0
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCccc---HHHHHHHHHHHHcccH-HHHHHcCCCCCHHHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAK---VPELCVSLYKFYGTTL-AGLRAIGYQFDCDDF 86 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~---~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ 86 (290)
+.++.-+++||+|-||+|.+...+- .+.++..... ...+.+.+|..+...+ ..+- ......+++
T Consensus 9 ~~~~ril~~FDFD~TIid~dSD~wV----------v~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lh--eqgv~~~~i 76 (256)
T KOG3120|consen 9 SSSPRILLVFDFDRTIIDQDSDNWV----------VDELPTTDLFNQLRDTYPKGFWNELMDRVFKELH--EQGVRIAEI 76 (256)
T ss_pred ccCCcEEEEEecCceeecCCcchHH----------HHhcccchhHHHHHHhcccchHHHHHHHHHHHHH--HcCCCHHHH
Confidence 3345679999999999985544332 2222221110 0111122233322111 1111 233445555
Q ss_pred HHHHhhcCCCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 87 HSYVHGRLPYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 87 ~~~~~~~~~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+ ..++..||+.++++.++ +.+.|+|......++.+++++++.+.|..|++.-.
T Consensus 77 k~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa-------------- 136 (256)
T KOG3120|consen 77 KQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPA-------------- 136 (256)
T ss_pred HHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCc--------------
Confidence 5545 55788999999998885 46889999999999999999999999998887432
Q ss_pred cccCCCCCccccccc-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHH---HcCCCCCcEEEEcCCccchHHHHhcCCe-EE
Q 036723 163 ASESERPTELFDIDD-YCSRPNADLELPRTPVVCKPFEEAFEQVFK---IANINPRKTIFFDDSIRNLETGKRLGLH-TV 237 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~---~~~~~~~e~i~iGDs~~Di~~a~~aGi~-~i 237 (290)
.++..+..-+.+.+. |=|..++.+.++ ...+..+.. +-|++-++.+|+||+-||+......--. ++
T Consensus 137 ~~da~G~L~v~pyH~~hsC~~CPsNmCK---------g~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~a 207 (256)
T KOG3120|consen 137 CVDASGRLLVRPYHTQHSCNLCPSNMCK---------GLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVA 207 (256)
T ss_pred ccCCCCcEEeecCCCCCccCcCchhhhh---------hHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCcee
Confidence 122222222223222 223333333332 244444443 3477888999999999999877665443 55
Q ss_pred EecCCCC----------CCCc-ceeecCHhHHHHHhHHHHHh
Q 036723 238 WVGTSHR----------AEGV-DYALESIHNIKEALPELWEV 268 (290)
Q Consensus 238 ~v~~~~~----------~~~a-d~v~~sl~el~~~l~~~~~~ 268 (290)
+...++. .-+| -..++|=.|+...|.+++..
T Consensus 208 mpRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 208 MPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKT 249 (256)
T ss_pred cccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHH
Confidence 5555553 1122 23467777888877776554
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-10 Score=110.73 Aligned_cols=89 Identities=24% Similarity=0.353 Sum_probs=72.3
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCch------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADK------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
++||+.+.|+.|+ ++++|+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 4578888888884 89999999766 4567788888885 887776553322
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC----CCCCcEEEEcCCccchHHHHhcCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN----INPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~----~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
+||++.++..++++++ +++++++||||+..|+++++.+|-
T Consensus 262 -----------------------------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 262 -----------------------------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred -----------------------------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 7999999999999985 899999999999999888777664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.7e-10 Score=97.18 Aligned_cols=43 Identities=16% Similarity=-0.009 Sum_probs=38.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+..|+.+++.+++++|++++++++|||+.||++|++.+|...+
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 4556788999999999999999999999999999999998654
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2e-10 Score=91.17 Aligned_cols=104 Identities=23% Similarity=0.432 Sum_probs=81.3
Q ss_pred HHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCC
Q 036723 106 RNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185 (290)
Q Consensus 106 ~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (290)
.+++..++++++|+|+.....++...+.+|+...|.++
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~------------------------------------------ 81 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI------------------------------------------ 81 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech------------------------------------------
Confidence 45667778999999999999999999999987554322
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC------HhH
Q 036723 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES------IHN 257 (290)
Q Consensus 186 ~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s------l~e 257 (290)
+.+...++.+++++++.+++|.||||..+|+...+.+|++++ +..++. ...++||+.. +.|
T Consensus 82 ----------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a-~~dAh~~v~~~a~~Vt~~~GG~GAvRE 150 (170)
T COG1778 82 ----------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA-VADAHPLLKQRADYVTSKKGGEGAVRE 150 (170)
T ss_pred ----------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc-ccccCHHHHHhhHhhhhccCcchHHHH
Confidence 445689999999999999999999999999999999999754 333332 4456666544 445
Q ss_pred HHHHh
Q 036723 258 IKEAL 262 (290)
Q Consensus 258 l~~~l 262 (290)
+.++|
T Consensus 151 v~dli 155 (170)
T COG1778 151 VCDLI 155 (170)
T ss_pred HHHHH
Confidence 55544
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-08 Score=86.37 Aligned_cols=106 Identities=10% Similarity=-0.040 Sum_probs=68.5
Q ss_pred CCCChhHHHHHH-cCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeec-ccCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLL-SLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFE-TLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~-~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..++|++.+.|+ .++ .+++|+||.+...++.+.+..++... +.+++.+ +...+ +.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~~g------------------g~~ 153 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERGNG------------------GWV 153 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEeCC------------------ceE
Confidence 467899999995 553 78999999999999999988765332 2333332 11100 110
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.+ .+ -.|.-|...++..+ +.+.+.+.+.|||.+|+.|...+|-+ ++|+..
T Consensus 154 --~g---~~----------c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vnp~ 203 (210)
T TIGR01545 154 --LP---LR----------CLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHR-WRVSKR 203 (210)
T ss_pred --cC---cc----------CCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCc-EEECcc
Confidence 00 00 11344445555444 44667789999999999999999975 555443
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.7e-08 Score=88.58 Aligned_cols=50 Identities=16% Similarity=0.180 Sum_probs=44.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
+++|..+++.+++++|++++++++|||+.||++|++.++..+++++++..
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 68999999999999999999999999999999999997766788877653
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-09 Score=96.69 Aligned_cols=67 Identities=15% Similarity=0.137 Sum_probs=53.0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHh
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIH 256 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~ 256 (290)
.+++++ +..|..+++.+++++|++++++++|||+.||++|++.+|+.+++. ++.. +..+++++.+.+
T Consensus 180 leI~~~----~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 180 IEITAK----GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNN 248 (256)
T ss_pred EEecCC----CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCC
Confidence 345555 677899999999999999999999999999999999999975553 3332 445777776643
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.3e-09 Score=87.01 Aligned_cols=50 Identities=24% Similarity=0.416 Sum_probs=46.7
Q ss_pred CCCCcHHH--H--HHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 194 VCKPFEEA--F--EQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 194 ~~Kp~~~~--~--~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+.||+|.+ | +.+++++|++|++++||+|+..++++|+++|+.++.+..+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 47999999 9 99999999999999999999999999999999999997654
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.1e-08 Score=87.37 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=62.3
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchH---HHHHHHHhcCCCCcc-eeEEeecccCCCCCCccccccccccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKT---HAARVLSRLGLEDCF-ERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~---~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
...++||+.++|+.|+ .+++++||.... .....++.+|+...+ +.++..+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~---------------------- 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD---------------------- 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC----------------------
Confidence 4578899999999774 789999998744 344678888987543 44544321
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHh
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~ 231 (290)
.++++...+.+.+.+++ +++|||+.+|+..+..
T Consensus 174 ------------------------~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 174 ------------------------KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDFFY 206 (266)
T ss_pred ------------------------CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhhhc
Confidence 35566888888888887 9999999999976543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.8e-09 Score=87.67 Aligned_cols=99 Identities=20% Similarity=0.353 Sum_probs=68.4
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeC-CchHHHHHHHHhcCCC----------CcceeEEeecccCCCCCCccccccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTN-ADKTHAARVLSRLGLE----------DCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~-~~~~~~~~~l~~~gl~----------~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
+.+.++|++.+.|+.|+ .+++++|. .....+..+|+.+++. ++|+.. +++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~----eI~------------ 105 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYL----EIY------------ 105 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEE----EES------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchh----hee------------
Confidence 56788999999999886 78999994 4567888999999998 566552 122
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
...|..-|+.+.+..|++.++++||+|-.++++.....|..++++.+|
T Consensus 106 --------------------------------~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 106 --------------------------------PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp --------------------------------SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred --------------------------------cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 235678999999999999999999999999999999999999999875
Q ss_pred C
Q 036723 243 H 243 (290)
Q Consensus 243 ~ 243 (290)
-
T Consensus 154 l 154 (169)
T PF12689_consen 154 L 154 (169)
T ss_dssp -
T ss_pred C
Confidence 4
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.1e-08 Score=84.63 Aligned_cols=70 Identities=19% Similarity=0.065 Sum_probs=52.6
Q ss_pred CCCcHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHhcCCeEEEecCCC----CCCC--c-ceeecC--HhHHHHHhH
Q 036723 195 CKPFEEAFEQVFKIANIN--PRKTIFFDDSIRNLETGKRLGLHTVWVGTSH----RAEG--V-DYALES--IHNIKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~--~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~----~~~~--a-d~v~~s--l~el~~~l~ 263 (290)
+..|..+++.+++++|++ .+++++|||+.||+.|++.+|..+++-+... -+.. + ++++.+ -+-+.+.|.
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 577889999999999999 9999999999999999999998765555432 2333 3 477755 234555554
Q ss_pred H
Q 036723 264 E 264 (290)
Q Consensus 264 ~ 264 (290)
+
T Consensus 254 ~ 254 (256)
T TIGR01486 254 H 254 (256)
T ss_pred H
Confidence 4
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.3e-08 Score=85.31 Aligned_cols=68 Identities=16% Similarity=0.036 Sum_probs=51.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc----eeecCH--hHHHHHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD----YALESI--HNIKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad----~v~~sl--~el~~~l~ 263 (290)
+++|+.+++.+++++|++++++++|||+.||+.|++.+|... .++++.. +..++ +++.+- +-+.+.|.
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~i-av~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGV-VVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEE-EEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688999999999999999999999999999999999999754 4555443 33455 666542 23555443
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.80 E-value=4e-08 Score=80.54 Aligned_cols=46 Identities=24% Similarity=0.462 Sum_probs=38.7
Q ss_pred CCCcHHHHHHHHHHcCC-----CCCcEEEEcCCc-cchHHHHhcCCeEEEecCC
Q 036723 195 CKPFEEAFEQVFKIANI-----NPRKTIFFDDSI-RNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~-----~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~ 242 (290)
.|| ..++.+++.++. +|+|+++|||.+ +|+-+|+.+|+.++|+..|
T Consensus 115 kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 115 KKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred CCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 366 666677777654 499999999999 8999999999999999765
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.7e-08 Score=84.38 Aligned_cols=95 Identities=23% Similarity=0.272 Sum_probs=60.8
Q ss_pred hhHHHHHHcC---CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccC
Q 036723 103 PVLRNLLLSL---PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYC 179 (290)
Q Consensus 103 pg~~~~L~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
|++.++++.+ +.+++|+|++....+..+++.+|+...+ +++.+-.... + ......+.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~-~--------------~~~~~~~~~-- 152 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNG-G--------------GIFTGRITG-- 152 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTT-C--------------CEEEEEEEE--
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecc-c--------------ceeeeeECC--
Confidence 6666999776 4889999999999999999999987422 2222210000 0 000000000
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHH---HHHcCCCCCcEEEEcCCccchHHHH
Q 036723 180 SRPNADLELPRTPVVCKPFEEAFEQV---FKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 180 ~~~~~~~~~~~~~~~~Kp~~~~~~~i---l~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
...+ -|...++.+ ... +.+...++++|||.+|+.|++
T Consensus 153 ------------~~~~-~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 153 ------------SNCG-GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ------------EEES-HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred ------------CCCC-cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 0001 256777777 445 888899999999999999985
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.3e-08 Score=86.59 Aligned_cols=62 Identities=23% Similarity=0.300 Sum_probs=51.5
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN 257 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e 257 (290)
+--|..+++.+++.+|++++++++|||+.||++|.+.+|.. +.++++.. +..|++++.+..+
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence 56778999999999999999999999999999999999985 55555443 5567888877665
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=5.9e-07 Score=79.70 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=61.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc----CCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHhh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL----GLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a----Gi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
+..|..+++.+++++|++.+++++|||+.||+.|++.+ |+ ++.++.+. ..|.+.+++.+++..+|..+....
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~-~vavg~a~--~~A~~~l~~~~~v~~~L~~l~~~~ 247 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGI-SVKVGTGA--TQASWRLAGVPDVWSWLEMITTAQ 247 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCe-EEEECCCC--CcCeEeCCCHHHHHHHHHHHHHhh
Confidence 46778999999999999999999999999999999998 54 56666543 568999999999999998887555
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.3e-08 Score=95.64 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=41.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEE--cCCccchHHHHhcCCeEEEecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFF--DDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~i--GDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+-.|..+++.+++.++++.++++.| ||+.||+.|.+.+|..++.-+.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 4677899999999999999999999 9999999999999997655433
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.3e-08 Score=81.17 Aligned_cols=96 Identities=17% Similarity=0.094 Sum_probs=80.5
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+...||+.++|+.|. +.++|+|++.+.+++.+++.++... .|+.+++.+....
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~------------------------ 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF------------------------ 96 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE------------------------
Confidence 567899999999996 7899999999999999999999875 8888887665432
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.+++ +...++.+|.+++++++|||+..++.++..+|+.+....
T Consensus 97 -------------------~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 97 -------------------TNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred -------------------eCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 2333 556678889999999999999999999999999876554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-07 Score=79.52 Aligned_cols=43 Identities=9% Similarity=0.129 Sum_probs=36.3
Q ss_pred CCCcHHHHHHHHHHcCC--CCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANI--NPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~--~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+--|+.+++.+++.+++ +++++++|||+.||+.|.+.+|+..+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 35557888899998876 67799999999999999999998643
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.2e-06 Score=69.20 Aligned_cols=140 Identities=13% Similarity=0.079 Sum_probs=84.9
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee--EEeecccCCCCCCccccccccccCCCCCcc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER--IISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
.+..-||..+++++.+ ++.+|+|+|....+..++++.+-.+..+. +++.+. .. ...++
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~-~i----------------h~dg~ 133 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND-YI----------------HIDGQ 133 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc-eE----------------cCCCc
Confidence 3577799999998886 88999999999999999988863332222 222221 11 00111
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE---EecCCCCCCCcc
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV---WVGTSHRAEGVD 249 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i---~v~~~~~~~~ad 249 (290)
..+-.+.. ...++.|+ . ..+.+.-+++.++|.|||.+|+.+|+...+-++ +++.=..+..+-
T Consensus 134 h~i~~~~d---------s~fG~dK~--~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f 198 (220)
T COG4359 134 HSIKYTDD---------SQFGHDKS--S----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNF 198 (220)
T ss_pred eeeecCCc---------cccCCCcc--h----hHHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCC
Confidence 11111110 00112333 3 344455577779999999999999999886433 111111233445
Q ss_pred eeecCHhHHHHHhHHHHHhh
Q 036723 250 YALESIHNIKEALPELWEVA 269 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~~~~~ 269 (290)
.-++++.|+..-+.++++.-
T Consensus 199 ~~fe~F~eIlk~iekvl~~~ 218 (220)
T COG4359 199 LEFETFYEILKEIEKVLEVQ 218 (220)
T ss_pred cccccHHHHHHHHHHHHhhh
Confidence 55778888888888877654
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.4e-07 Score=88.32 Aligned_cols=110 Identities=18% Similarity=0.282 Sum_probs=83.3
Q ss_pred CCCChhHHHHHHcCC---C-cEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---I-RKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~-~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++||+.+.++.|+ + +++++|+.+...+...++.+|+..+|..+.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------ 410 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL------------------------------ 410 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC------------------------------
Confidence 467899999999985 7 899999999999999999999987664221
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec-CCCC--CCCccee
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG-TSHR--AEGVDYA 251 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~-~~~~--~~~ad~v 251 (290)
+.++.. ++++++.+.++++||||+.||+.+++.+|+. +.++ .+.. ...+|++
T Consensus 411 --------------------p~~K~~----~i~~l~~~~~~v~~vGDg~nD~~al~~A~vg-ia~g~~~~~~~~~~ad~v 465 (536)
T TIGR01512 411 --------------------PEDKLE----IVKELREKYGPVAMVGDGINDAPALAAADVG-IAMGASGSDVAIETADVV 465 (536)
T ss_pred --------------------cHHHHH----HHHHHHhcCCEEEEEeCCHHHHHHHHhCCEE-EEeCCCccHHHHHhCCEE
Confidence 123334 4445555568999999999999999999974 3333 2222 4568888
Q ss_pred e--cCHhHHHHHhH
Q 036723 252 L--ESIHNIKEALP 263 (290)
Q Consensus 252 ~--~sl~el~~~l~ 263 (290)
+ +++.+|.+.+.
T Consensus 466 l~~~~l~~l~~~i~ 479 (536)
T TIGR01512 466 LLNDDLSRLPQAIR 479 (536)
T ss_pred EECCCHHHHHHHHH
Confidence 8 88998887554
|
. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.1e-07 Score=76.18 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=34.4
Q ss_pred CCCcHHHHHHHHHHcCC----CCCcEEEEcCC-----------ccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANI----NPRKTIFFDDS-----------IRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~----~~~e~i~iGDs-----------~~Di~~a~~aGi~~i 237 (290)
+||.+.+++.+++.++. +.++.+||||+ ..|.+-|.++|+++.
T Consensus 96 RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 96 RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 89999999999999874 99999999996 578999999999753
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.42 E-value=2e-06 Score=76.15 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=70.3
Q ss_pred hhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCC-CccccccccccCCCCCcccccccc
Q 036723 103 PVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDK-GTVLVDQDASESERPTELFDIDDY 178 (290)
Q Consensus 103 pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
||+.++|+.|+ ++++|+|++.+..+...++.+|+..+|+.++++++...... ....+..++..+....=.+|..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~-- 226 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTT-- 226 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCC--
Confidence 56666666664 77899999999999999999999999999999888754211 0001222222222222223321
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCC-cEEEEcCCc-cch
Q 036723 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPR-KTIFFDDSI-RNL 226 (290)
Q Consensus 179 ~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~-e~i~iGDs~-~Di 226 (290)
....+||. |......+++.|+.-= -+-.|+|-. ||+
T Consensus 227 -----~~~~lPKS-------prvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 227 -----DGKRLPKS-------PRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred -----CCCcCCCC-------CeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 12223332 6788888999999753 455666666 554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.5e-06 Score=76.04 Aligned_cols=90 Identities=13% Similarity=0.012 Sum_probs=74.0
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHH--HHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAA--RVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~--~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
....++||+.++|+.|+ ++++++||..+.... ..++.+|+.. +|+.+++++....
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~------------------- 81 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV------------------- 81 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-------------------
Confidence 34567899999999986 689999999887665 7889999987 8999999875432
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
..+..++++++++++++++|||+..|++....+|.
T Consensus 82 -----------------------------~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 82 -----------------------------QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----------------------------HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 56677778889999999999999999988876664
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.1e-06 Score=77.21 Aligned_cols=45 Identities=11% Similarity=-0.063 Sum_probs=38.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDD----SIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGD----s~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+.-|..+++.++++ ++++++||| +.||++|.+.++...+.+.+++
T Consensus 186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHH
Confidence 67888999999998 589999999 8899999998888777776433
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.7e-07 Score=75.34 Aligned_cols=48 Identities=15% Similarity=0.203 Sum_probs=36.7
Q ss_pred EEEcCCccchHHHHhcCCeEEEecCCCCCCC-cceeecCHhHHHHHhHH
Q 036723 217 IFFDDSIRNLETGKRLGLHTVWVGTSHRAEG-VDYALESIHNIKEALPE 264 (290)
Q Consensus 217 i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~-ad~v~~sl~el~~~l~~ 264 (290)
++|+|++..+..+...|++++.+..+++... .-..+.+++|+.+.+-.
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i~~ 187 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLILS 187 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHHHH
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHHHh
Confidence 7999999999999999999999988886433 36779999999887744
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-06 Score=77.09 Aligned_cols=43 Identities=19% Similarity=0.091 Sum_probs=35.5
Q ss_pred CCcHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 196 KPFEEAFEQVFKIANIN--PRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~--~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
-+|..+++.+.+.++-. +-.++.+|||.||+.|.+.+.++.+-
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 46778888888887654 44799999999999999999987554
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.35 E-value=2e-06 Score=84.21 Aligned_cols=109 Identities=17% Similarity=0.264 Sum_probs=80.2
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
..++|++.++++.|+ ++++++|+.....++.+.+++|+. +| . + ..
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~----~-~-~~------------------------- 451 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR----A-E-VL------------------------- 451 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE----c-c-CC-------------------------
Confidence 367899999998885 789999999999999999999985 22 1 1 11
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee-
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL- 252 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~- 252 (290)
+++|.+.++.+. .++++|+||||+.||+.+++++|+. +.++.+.. ...+|+++
T Consensus 452 -------------------p~~K~~~v~~l~----~~~~~v~~VGDg~nD~~al~~A~vg-ia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 452 -------------------PDDKAALIKELQ----EKGRVVAMVGDGINDAPALAQADVG-IAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred -------------------hHHHHHHHHHHH----HcCCEEEEEeCCCccHHHHhhCCEE-EEeCCcCHHHHhhCCEEEe
Confidence 234455555543 3678999999999999999999985 44444432 45688888
Q ss_pred -cCHhHHHHHhH
Q 036723 253 -ESIHNIKEALP 263 (290)
Q Consensus 253 -~sl~el~~~l~ 263 (290)
+++.+|.+++.
T Consensus 508 ~~~l~~l~~~i~ 519 (562)
T TIGR01511 508 RNDLNDVATAID 519 (562)
T ss_pred CCCHHHHHHHHH
Confidence 47777776553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.9e-06 Score=84.27 Aligned_cols=109 Identities=15% Similarity=0.236 Sum_probs=80.8
Q ss_pred CCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++||+.++++.|+ ++++++|+.+...+..+++++|+..+|..+.
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------ 432 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL------------------------------ 432 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC------------------------------
Confidence 467999999999883 6799999999999999999999977665431
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL 252 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~ 252 (290)
+++++..++. ++..+++|+||||+.||+.+++++|+...+ +.+.. ...+|+++
T Consensus 433 --------------------p~~K~~~v~~----l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad~vi 487 (556)
T TIGR01525 433 --------------------PEDKLAIVKE----LQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAADIVL 487 (556)
T ss_pred --------------------HHHHHHHHHH----HHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCCEEE
Confidence 1233444444 444667999999999999999999964433 33322 44688888
Q ss_pred c--CHhHHHHHh
Q 036723 253 E--SIHNIKEAL 262 (290)
Q Consensus 253 ~--sl~el~~~l 262 (290)
. ++..+.+++
T Consensus 488 ~~~~~~~l~~~i 499 (556)
T TIGR01525 488 LNDDLSSLPTAI 499 (556)
T ss_pred eCCCHHHHHHHH
Confidence 7 577776654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.9e-06 Score=77.62 Aligned_cols=128 Identities=20% Similarity=0.251 Sum_probs=70.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc-C--------CCCcceeEEeecccCCCCCCcccccccccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL-G--------LEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~-g--------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
.+...|.+..+|+.|+ .+++++||.+-.++...++.+ | ..++||.|++...=. .|.
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP------------~FF 248 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKP------------GFF 248 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CC------------HHH
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCC------------ccc
Confidence 3455788888888886 579999999999999998776 2 346899988754311 011
Q ss_pred CCCCCccccccccCCCCCC---CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhc-CCeEEEec
Q 036723 166 SERPTELFDIDDYCSRPNA---DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRL-GLHTVWVG 240 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~a-Gi~~i~v~ 240 (290)
.+.. .++......+.+.. ...+.++.+.. ..-...+.+.+|....+++||||++ .||...+.. ||.|++|-
T Consensus 249 ~~~~-pfr~vd~~~g~l~~~~~~~~l~~g~vY~---gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 249 TEGR-PFREVDTETGKLKWGKYVGPLEKGKVYS---GGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp CT----EEEEETTTSSEECS---SS--TC-EEE---E--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred CCCC-ceEEEECCCCccccccccccccCCCEee---cCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 1111 11111111111110 11222221222 2345566777889899999999999 899888776 99999994
Q ss_pred C
Q 036723 241 T 241 (290)
Q Consensus 241 ~ 241 (290)
.
T Consensus 325 ~ 325 (448)
T PF05761_consen 325 P 325 (448)
T ss_dssp T
T ss_pred h
Confidence 4
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.23 E-value=1e-05 Score=76.18 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=43.1
Q ss_pred CCCcHHHHHHHHHHc---CCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 195 CKPFEEAFEQVFKIA---NINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~---~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
+-.|..+++.+++++ |++++++++|||+.||++|.+.+|...+.++++..
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~ 225 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQE 225 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcH
Confidence 566789999999999 99999999999999999999999954566666553
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=9.4e-06 Score=72.03 Aligned_cols=110 Identities=18% Similarity=0.207 Sum_probs=70.9
Q ss_pred hhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc-ccccccccCCCCCcccccccc
Q 036723 103 PVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV-LVDQDASESERPTELFDIDDY 178 (290)
Q Consensus 103 pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 178 (290)
|++.++|+.|+ ++++|+||+.+..+...++.+|+..+|+.++++++.....+..+ .+.+++..+-...=.+|...
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~- 229 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD- 229 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc-
Confidence 45556665554 78999999999999999999999999999999887654221111 23333333333333343332
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCc-cch
Q 036723 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDSI-RNL 226 (290)
Q Consensus 179 ~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~-~Di 226 (290)
...+|| .|......+++.|+.- +-+-.|+|-. ||+
T Consensus 230 ------~~~lPK-------SprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 230 ------VKNLPK-------SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred ------ccCCCC-------CCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 112222 2678888899999975 3455677766 554
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.8e-06 Score=72.40 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=61.9
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc-------CCeEEEecCCCCCCCcceeecCHhHHHHHhHHH
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL-------GLHTVWVGTSHRAEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a-------Gi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~ 265 (290)
-.|..+++.++++++++++++++|||+.+|+.|++.+ |..++.+..+.....|++++++.+++.++|..+
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l 242 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLL 242 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHH
Confidence 3456999999999999999999999999999999999 667888876766788999999999999988765
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.4e-06 Score=83.10 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC--eEEEecCCCCCCCcceeecCHhHHHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL--HTVWVGTSHRAEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi--~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~ 266 (290)
+..|..+++.+++ +++++.+++|||+.||+.|++.++. .++.++. ....|++++++.+|+.+.|..+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~--~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP--GESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC--CCCcceEeCCCHHHHHHHHHHHh
Confidence 4567899999998 7788999999999999999999743 3455544 45778999999999999888765
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=82.52 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=80.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+......+.+.+.+|+...|..+.
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~-------------------------------- 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL-------------------------------- 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC--------------------------------
Confidence 66899999998885 7899999999999999999999875443211
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc--eee
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD--YAL 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad--~v~ 252 (290)
| +.-..++++++.++++++||||+.||+.+++.+|+. +.++++.. ...+| +..
T Consensus 698 --------------------p--~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvg-ia~g~g~~~a~~~ad~vl~~ 754 (834)
T PRK10671 698 --------------------P--DGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVG-IAMGGGSDVAIETAAITLMR 754 (834)
T ss_pred --------------------H--HHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCee-EEecCCCHHHHHhCCEEEec
Confidence 1 112345666667788999999999999999999994 44444433 23344 455
Q ss_pred cCHhHHHHHhH
Q 036723 253 ESIHNIKEALP 263 (290)
Q Consensus 253 ~sl~el~~~l~ 263 (290)
+++.+|.+++.
T Consensus 755 ~~~~~i~~~i~ 765 (834)
T PRK10671 755 HSLMGVADALA 765 (834)
T ss_pred CCHHHHHHHHH
Confidence 77888887765
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.6e-05 Score=66.82 Aligned_cols=42 Identities=12% Similarity=-0.095 Sum_probs=36.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHhcCCeEEEecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDD----SIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGD----s~~Di~~a~~aGi~~i~v~~ 241 (290)
+..|..+++.++ +++++++||| +.||++|.+.-|+.++.|..
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 577788888887 8999999999 68999999998988877743
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=3e-05 Score=60.08 Aligned_cols=114 Identities=13% Similarity=0.119 Sum_probs=87.2
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
-.+++.+.+.++.|+ ..++|.|+.....+....+..|+.. ++++.
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~~--~rv~a------------------------------- 75 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIPV--ERVFA------------------------------- 75 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCce--eeeec-------------------------------
Confidence 466778888887776 7788888888888888888888652 33322
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC----CCCcceee
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR----AEGVDYAL 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~----~~~ad~v~ 252 (290)
-.++..=..+++.++-+.+.|++|||+.||+.+.+++.+..|-+..... ...+|+++
T Consensus 76 -------------------~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi 136 (152)
T COG4087 76 -------------------GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136 (152)
T ss_pred -------------------ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh
Confidence 2234666788888988889999999999999999999988776665433 34589999
Q ss_pred cCHhHHHHHhHH
Q 036723 253 ESIHNIKEALPE 264 (290)
Q Consensus 253 ~sl~el~~~l~~ 264 (290)
+++.|+.+++..
T Consensus 137 k~i~e~ldl~~~ 148 (152)
T COG4087 137 KEIAEILDLLKD 148 (152)
T ss_pred hhHHHHHHHhhc
Confidence 999999887643
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.5e-05 Score=82.05 Aligned_cols=137 Identities=19% Similarity=0.316 Sum_probs=94.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+..|+...++.+++..++... ..+.....
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~------------~~~~l~~~---- 591 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM------------DDQQLSQI---- 591 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC------------CHHHHHHH----
Confidence 67899999998885 889999999999999999999998777666665544320 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec-CCCC--CCCcceee-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG-TSHR--AEGVDYAL- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~-~~~~--~~~ad~v~- 252 (290)
.....+.+...|+--..+.+.++-..+.++|+||+.||+.+++.|++... ++ .+.. +..+|+++
T Consensus 592 -----------~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia-~g~~g~~va~~aaDivl~ 659 (884)
T TIGR01522 592 -----------VPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVA-MGQTGTDVAKEAADMILT 659 (884)
T ss_pred -----------hhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEe-cCCCcCHHHHHhcCEEEc
Confidence 01111234455565566666666666889999999999999999997543 33 2332 45689998
Q ss_pred -cCHhHHHHHhHH
Q 036723 253 -ESIHNIKEALPE 264 (290)
Q Consensus 253 -~sl~el~~~l~~ 264 (290)
+++..+.+++.+
T Consensus 660 dd~~~~i~~~i~~ 672 (884)
T TIGR01522 660 DDDFATILSAIEE 672 (884)
T ss_pred CCCHHHHHHHHHH
Confidence 558888776644
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.06 E-value=2e-05 Score=69.22 Aligned_cols=48 Identities=25% Similarity=0.237 Sum_probs=38.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+-.|..+++.+++++++++++++++|||.||+.|. ..+...|.|++..
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 45678999999999999999999999999999999 6666788887754
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0002 Score=60.82 Aligned_cols=103 Identities=13% Similarity=0.178 Sum_probs=79.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
..++++...++..+ .+++|+|++.....+.+..+.+-.+.-..+.+.-+...+
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG------------------------ 178 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIG------------------------ 178 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcccc------------------------
Confidence 66889999998875 789999999998888777666433221111111111111
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.|...+.|..+.+..|.++.+++++-|-..-..+|+.+|+.+..+.++.+
T Consensus 179 ------------------~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 179 ------------------LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred ------------------ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCC
Confidence 57778999999999999999999999999999999999999888866654
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00081 Score=64.69 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=56.9
Q ss_pred CChhHHHHHHcCCCcEEEEeCCchHHHHHHHHh-cCCCCcceeEEeecccC-CCCCCccccccccccCCCCCcccccccc
Q 036723 101 PDPVLRNLLLSLPIRKVIFTNADKTHAARVLSR-LGLEDCFERIISFETLN-STDKGTVLVDQDASESERPTELFDIDDY 178 (290)
Q Consensus 101 ~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
..|.+.+.++..+. .+++|..++.+++...+. +|++ .+++.+-.. ..+. + .|.
T Consensus 111 l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid----~VIgTeLev~~~G~------------------~--TG~ 165 (497)
T PLN02177 111 VHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGAD----KVLGTELEVSKSGR------------------A--TGF 165 (497)
T ss_pred cCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCC----EEEecccEECcCCE------------------E--eee
Confidence 55677777777654 499999999999999965 7764 343332100 0000 0 000
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
+.-++ +..+..|...+ .+.+|.+... ++.|||.+|..+...++-.
T Consensus 166 i~g~~--------~c~Ge~Kv~rl---~~~~g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 166 MKKPG--------VLVGDHKRDAV---LKEFGDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred ecCCC--------CCccHHHHHHH---HHHhCCCCce-EEEECCccHHHHHHhCCcc
Confidence 00000 00122233333 3556654444 8999999999999999965
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00018 Score=61.56 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=63.9
Q ss_pred CHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHH-H---HHHHHhcCCCCccee-EEeecccCCCC
Q 036723 82 DCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTH-A---ARVLSRLGLEDCFER-IISFETLNSTD 153 (290)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~-~---~~~l~~~gl~~~f~~-i~~~~~~~~~~ 153 (290)
+++++...+.. ....+.||+.++++... ..++.+||...+. . -.-|++.|+...-.. ++--.
T Consensus 108 ~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk------ 177 (274)
T COG2503 108 TPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKK------ 177 (274)
T ss_pred CccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEee------
Confidence 35555555544 33588899999999884 7789999987766 2 233667777654332 21111
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
..|++...++.+.+.+.+ ++.|||++.|.....
T Consensus 178 ----------------------------------------~~k~Ke~R~~~v~k~~~i----Vm~vGDNl~DF~d~~ 210 (274)
T COG2503 178 ----------------------------------------DKKSKEVRRQAVEKDYKI----VMLVGDNLDDFGDNA 210 (274)
T ss_pred ----------------------------------------CCCcHHHHHHHHhhccce----eeEecCchhhhcchh
Confidence 157888888888775555 999999998765443
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00053 Score=59.21 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=34.0
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHH---HHHHHHhcCCCCcceeEE
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTH---AARVLSRLGLEDCFERII 144 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~---~~~~l~~~gl~~~f~~i~ 144 (290)
..++.|++.++++.++ +.++++|+.+... ...-|...|+..+ +.++
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~Li 169 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLI 169 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-Ceee
Confidence 4578899999998875 7899999988655 4556777787654 4433
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00016 Score=56.12 Aligned_cols=48 Identities=17% Similarity=0.072 Sum_probs=38.3
Q ss_pred CCCCChhHHHHHHcCCCc---EEEEeCCchHHHHHHHHhcCCCCcceeEEe
Q 036723 98 MLKPDPVLRNLLLSLPIR---KVIFTNADKTHAARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~~~---~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~ 145 (290)
.+.++|.+.+++++++-. +..+|=+....+-..+..+++..+|+.++.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi 89 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI 89 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe
Confidence 467889999999999844 455555667777778999999999998876
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00022 Score=58.24 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=28.2
Q ss_pred HHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 204 QVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 204 ~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.+++..++ -++.|||.+||.+|+.+|...|-+.+.
T Consensus 179 ~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 179 QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred HHHHhcCc----eEEecCCchhhhHHHhcCccceeEEec
Confidence 45555665 579999999999999999998876544
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.60 E-value=2.5e-05 Score=63.63 Aligned_cols=90 Identities=22% Similarity=0.239 Sum_probs=60.9
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCC-CCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGL-EDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+.+.||+.++|+.+. +.++|+|++...++..+++.+.. ...|+.+++.++....
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~----------------------- 91 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD----------------------- 91 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-----------------------
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-----------------------
Confidence 566799999999986 88999999999999999999987 5688888876644321
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
.+.. ..-++.+|.+.+++|+|+|+..-...-...++
T Consensus 92 -------------------~~~~----~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i 127 (159)
T PF03031_consen 92 -------------------KGSY----IKDLSKLGRDLDNVVIVDDSPRKWALQPDNGI 127 (159)
T ss_dssp -------------------TTEE----E--GGGSSS-GGGEEEEES-GGGGTTSGGGEE
T ss_pred -------------------cccc----ccchHHHhhccccEEEEeCCHHHeeccCCceE
Confidence 0000 13355567788999999999864433344444
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=97.59 E-value=3.7e-05 Score=66.66 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=54.8
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchH---HHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKT---HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
++.|++.++++.++ ..++++|+.+.. ....-|...|...+-..+......... .
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~-~------------------- 174 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK-K------------------- 174 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS---------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc-c-------------------
Confidence 77788999988774 789999997544 344457777866543334444322110 0
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH-cCCCCCcEEEEcCCccchHHHHhc
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKI-ANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~-~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
. ...=|....+.+.++ +.+ +++|||..+|+..++..
T Consensus 175 ---------------~----~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 175 ---------------S----AVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp ------------------------SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHH
T ss_pred ---------------c----ccccchHHHHHHHHcCCcE----EEEeCCCHHHhhccccc
Confidence 0 001133555555555 444 99999999999995544
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.002 Score=54.80 Aligned_cols=163 Identities=15% Similarity=0.148 Sum_probs=84.2
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC--cceeEEeecccCCCCCCc--ccccccc-ccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED--CFERIISFETLNSTDKGT--VLVDQDA-SESERPT 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~--~~~~~~~-~~~~~~~ 170 (290)
..++.||+.+.++.|+ ..-+++|..-+.++.+..+..|+.. ....-+..+++.....-- .+.- -. ....+..
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~-~~~~~~~~ge 159 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSI-IDVIASLSGE 159 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHh-cCccccccHH
Confidence 4678899999999997 5678999999999999999888742 111111111111000000 0000 00 0001111
Q ss_pred cc-ccccccCCCCCC---CCCCCCCCCC-CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc---C-CeEEEecC
Q 036723 171 EL-FDIDDYCSRPNA---DLELPRTPVV-CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL---G-LHTVWVGT 241 (290)
Q Consensus 171 ~~-~~~~~~~~~~~~---~~~~~~~~~~-~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a---G-i~~i~v~~ 241 (290)
++ -+....|++... .-++..-..+ +.-+...++..++.-+++-+ +++||||.+|++|.+.+ | +...+.++
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCC
Confidence 11 122233444322 1111111112 23445666676666666655 99999999999998875 3 43334444
Q ss_pred CCCCCCccee--ecCHhHHHHHh
Q 036723 242 SHRAEGVDYA--LESIHNIKEAL 262 (290)
Q Consensus 242 ~~~~~~ad~v--~~sl~el~~~l 262 (290)
-+....||.. -++...+..+|
T Consensus 239 eYal~eAdVAvisp~~~a~~pvi 261 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVI 261 (315)
T ss_pred cccccccceEEeccchhhhhHHH
Confidence 5555555544 34444444433
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.52 E-value=7.4e-05 Score=63.26 Aligned_cols=43 Identities=21% Similarity=0.123 Sum_probs=40.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 6899999999999999999999999999999999999998754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00044 Score=71.63 Aligned_cols=136 Identities=13% Similarity=0.181 Sum_probs=84.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc----eeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF----ERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+..|+...- ...++..++.. -...++
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~---------------~~~~~~ 601 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE---------------MGPAKQ 601 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh---------------CCHHHH
Confidence 56889999998886 889999998888888899999985311 11222221110 000000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcce
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDY 250 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~ 250 (290)
... ..+.-+.+...|+-=..+.+.++-..+.+.++||+.||+.|.+.|++. +.++.+.. +..+|+
T Consensus 602 ~~~------------~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g~~~ak~aAD~ 668 (917)
T TIGR01116 602 RAA------------CRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSGTEVAKEASDM 668 (917)
T ss_pred HHh------------hhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCCcHHHHHhcCe
Confidence 000 000011122233333455555555567889999999999999999995 44444433 446899
Q ss_pred eecC--HhHHHHHhH
Q 036723 251 ALES--IHNIKEALP 263 (290)
Q Consensus 251 v~~s--l~el~~~l~ 263 (290)
++.+ +..+.+++.
T Consensus 669 vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 669 VLADDNFATIVAAVE 683 (917)
T ss_pred EEccCCHHHHHHHHH
Confidence 9987 777777653
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00025 Score=57.31 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=44.5
Q ss_pred HHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCCCCCc---ceeecCHhHHHHHhHHHHH
Q 036723 204 QVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHRAEGV---DYALESIHNIKEALPELWE 267 (290)
Q Consensus 204 ~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~~~~a---d~v~~sl~el~~~l~~~~~ 267 (290)
.+.+.++++- ++.|+. |-.+.|+++|++.+.+++++..-++ -..+....|..+.+.+.++
T Consensus 128 ~~vrth~idl----f~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~k 191 (194)
T COG5663 128 EAVRTHNIDL----FFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRLK 191 (194)
T ss_pred hhhHhhccCc----cccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHhc
Confidence 4567788864 999999 7899999999999999998863332 2335667777777766544
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00091 Score=67.72 Aligned_cols=106 Identities=19% Similarity=0.218 Sum_probs=73.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+.....+..+.+.+|+..++ + ..
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~-~~-------------------------- 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------G-LL-------------------------- 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------C-CC--------------------------
Confidence 67899999998885 889999999999999999999985221 1 11
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~-- 252 (290)
+.-|+..++. ++ .+..++||||+.||..+++.+++...+ +.+.. ...+|.++
T Consensus 615 ------------------p~~K~~~v~~----l~-~~~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~adivl~~ 670 (741)
T PRK11033 615 ------------------PEDKVKAVTE----LN-QHAPLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETADAALTH 670 (741)
T ss_pred ------------------HHHHHHHHHH----Hh-cCCCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhCCEEEec
Confidence 0112344443 33 235799999999999999999975443 44332 33456554
Q ss_pred cCHhHHHHHh
Q 036723 253 ESIHNIKEAL 262 (290)
Q Consensus 253 ~sl~el~~~l 262 (290)
+++.+|.+++
T Consensus 671 ~~l~~l~~~i 680 (741)
T PRK11033 671 NRLRGLAQMI 680 (741)
T ss_pred CCHHHHHHHH
Confidence 5677776544
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00043 Score=56.39 Aligned_cols=52 Identities=21% Similarity=0.344 Sum_probs=44.6
Q ss_pred CCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCC-Ccc-eeEEeecc
Q 036723 97 MMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLE-DCF-ERIISFET 148 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~-~~f-~~i~~~~~ 148 (290)
..+.++||+.++|+.|+ +.++|+|++.+.++..+++.++.. .+| +.+++.++
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~ 110 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDE 110 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence 34678999999999996 789999999999999999999988 478 66777654
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0029 Score=51.60 Aligned_cols=39 Identities=8% Similarity=0.062 Sum_probs=27.6
Q ss_pred cHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHhcCCeE
Q 036723 198 FEEAFEQVFKIANINPRK-TIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e-~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+.+.++.+.+.+.-..-. ++.+||+.+|+++=+++|++.
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 456677777655422222 456899999999999999983
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.012 Score=51.78 Aligned_cols=50 Identities=24% Similarity=0.343 Sum_probs=41.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHH----HHhcCCeEEEecCCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLET----GKRLGLHTVWVGTSHR 244 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~----a~~aGi~~i~v~~~~~ 244 (290)
+-++..++..++.+.|..|+.+|||+|+..++.. .+..|+.+.++.....
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 4567799999999999999999999999976654 3448999888876654
|
The function is not known. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0015 Score=55.18 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=33.2
Q ss_pred CCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCC
Q 036723 100 KPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLE 137 (290)
Q Consensus 100 ~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~ 137 (290)
...|++.++|+.+. +.++|.|.+...++..++..+++.
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence 44589999999885 889999999999999999998764
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0022 Score=63.96 Aligned_cols=110 Identities=13% Similarity=0.084 Sum_probs=77.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.++|...
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~~--------------------------------- 487 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAEC--------------------------------- 487 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcCC---------------------------------
Confidence 67899999988886 789999999999999999999997543211
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
+ |+-=..+.+.++-..+-+.|+||+.||..+.+.|.+. +.++.+-+ +.-+|.+.-
T Consensus 488 -------------------~--PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLld 545 (673)
T PRK14010 488 -------------------K--PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVG-LAMNSGTMSAKEAANLIDLD 545 (673)
T ss_pred -------------------C--HHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEE-EEeCCCCHHHHHhCCEEEcC
Confidence 1 1222233344443446699999999999999999985 44445543 555777753
Q ss_pred -CHhHHHHHhHH
Q 036723 254 -SIHNIKEALPE 264 (290)
Q Consensus 254 -sl~el~~~l~~ 264 (290)
++..|.+.+..
T Consensus 546 d~ls~Iv~av~~ 557 (673)
T PRK14010 546 SNPTKLMEVVLI 557 (673)
T ss_pred CCHHHHHHHHHH
Confidence 46666655543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0025 Score=63.44 Aligned_cols=108 Identities=10% Similarity=0.126 Sum_probs=75.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+.+|+.++|.. ..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~------~~-------------------------- 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE------AT-------------------------- 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC------CC--------------------------
Confidence 66899999998886 78999999999999999999998653321 11
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
+.-|...++.+.+ ....+.|+||+.||..+.+.+++..+ ++.+.. ...+|++.-
T Consensus 494 ------------------PedK~~~v~~lq~----~g~~VamvGDG~NDapAL~~AdvGiA-m~~gt~~akeaadivLld 550 (675)
T TIGR01497 494 ------------------PEDKIALIRQEQA----EGKLVAMTGDGTNDAPALAQADVGVA-MNSGTQAAKEAANMVDLD 550 (675)
T ss_pred ------------------HHHHHHHHHHHHH----cCCeEEEECCCcchHHHHHhCCEeEE-eCCCCHHHHHhCCEEECC
Confidence 1223345544433 33469999999999999999998644 444443 445677643
Q ss_pred -CHhHHHHHh
Q 036723 254 -SIHNIKEAL 262 (290)
Q Consensus 254 -sl~el~~~l 262 (290)
++..|.+.+
T Consensus 551 d~~s~Iv~av 560 (675)
T TIGR01497 551 SDPTKLIEVV 560 (675)
T ss_pred CCHHHHHHHH
Confidence 355555544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0027 Score=58.98 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=60.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCc---EEEEcCCccchHHHHh-----cCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRK---TIFFDDSIRNLETGKR-----LGLHTVWVGTSHRAEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e---~i~iGDs~~Di~~a~~-----aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~ 266 (290)
+-.|..+++.+++++|++..+ .++|||..||..|++. .|+ .|.++.+.....|.|.+.+.+|+.++|..+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 356789999999999998763 3899999999999996 354 5667766666789999999999999998876
Q ss_pred Hhh
Q 036723 267 EVA 269 (290)
Q Consensus 267 ~~~ 269 (290)
+-.
T Consensus 378 ~~~ 380 (384)
T PLN02580 378 TWK 380 (384)
T ss_pred Hhh
Confidence 544
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0041 Score=62.06 Aligned_cols=109 Identities=14% Similarity=0.174 Sum_probs=75.7
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|++++|...
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~--------------------------------- 491 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEA--------------------------------- 491 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEccC---------------------------------
Confidence 56899999988886 889999999999999999999986533111
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
. |+-=..+.++++-..+-+.|+||+.||..+.+.|.+. +.++.|-+ +.-+|.+.-
T Consensus 492 -------------------~--PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLld 549 (679)
T PRK01122 492 -------------------T--PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAGNMVDLD 549 (679)
T ss_pred -------------------C--HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEEeC
Confidence 1 1222233333433445699999999999999999985 44445543 555777754
Q ss_pred -CHhHHHHHhH
Q 036723 254 -SIHNIKEALP 263 (290)
Q Consensus 254 -sl~el~~~l~ 263 (290)
++..|.+.+.
T Consensus 550 d~~s~Iv~av~ 560 (679)
T PRK01122 550 SNPTKLIEVVE 560 (679)
T ss_pred CCHHHHHHHHH
Confidence 4666655543
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0032 Score=63.05 Aligned_cols=108 Identities=18% Similarity=0.286 Sum_probs=75.6
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.+.|++.+.++.|+ +++.++|+..+..++.+.+.+|+++++..+...
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPe------------------------------ 586 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPE------------------------------ 586 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCcH------------------------------
Confidence 56788888887775 789999999999999999999997655333221
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES 254 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s 254 (290)
-|.+.++ +++-....++||||+.||..+...+.+. +.++.|.+ .+-+|.++-+
T Consensus 587 --------------------dK~~~V~----~l~~~g~~VamVGDGINDAPALA~AdVG-iAmG~GtDvA~eaADvvL~~ 641 (713)
T COG2217 587 --------------------DKAEIVR----ELQAEGRKVAMVGDGINDAPALAAADVG-IAMGSGTDVAIEAADVVLMR 641 (713)
T ss_pred --------------------HHHHHHH----HHHhcCCEEEEEeCCchhHHHHhhcCee-EeecCCcHHHHHhCCEEEec
Confidence 1223433 3333336799999999999999999984 55554443 4557766443
Q ss_pred --HhHHHHHh
Q 036723 255 --IHNIKEAL 262 (290)
Q Consensus 255 --l~el~~~l 262 (290)
+..+.+.+
T Consensus 642 ~dL~~v~~ai 651 (713)
T COG2217 642 DDLSAVPEAI 651 (713)
T ss_pred CCHHHHHHHH
Confidence 66665544
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0083 Score=52.95 Aligned_cols=43 Identities=12% Similarity=0.046 Sum_probs=30.3
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHH---HHHHHhcCCCCc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHA---ARVLSRLGLEDC 139 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~---~~~l~~~gl~~~ 139 (290)
...++.|++.++++.++ .+++++|+.+.... ..-|...|...+
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~ 190 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW 190 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc
Confidence 34678899999988774 78999999875433 334566676543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.009 Score=61.66 Aligned_cols=134 Identities=15% Similarity=0.210 Sum_probs=79.9
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+..|+.. +.+++..+.... ...++...
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~---------------~~~el~~~- 576 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEEL---------------SDEELARE- 576 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhC---------------CHHHHHHH-
Confidence 56888888888875 8899999999999999999999963 234443332210 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
..+-.++..-.|+-=..+.+.++-..+.+.|+||+.||..+.+.|++. +.++.+.+ +.-+|.++-
T Consensus 577 -----------~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVG-IAmg~gtdvAk~aADiVLld 644 (867)
T TIGR01524 577 -----------LRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG-ISVDTAADIAKEASDIILLE 644 (867)
T ss_pred -----------hhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEE-EEeCCccHHHHHhCCEEEec
Confidence 000011122223333333443433446799999999999999999986 44444443 555787763
Q ss_pred -CHhHHHHHhH
Q 036723 254 -SIHNIKEALP 263 (290)
Q Consensus 254 -sl~el~~~l~ 263 (290)
++..+.+++.
T Consensus 645 d~~~~I~~ai~ 655 (867)
T TIGR01524 645 KSLMVLEEGVI 655 (867)
T ss_pred CChHHHHHHHH
Confidence 4555555443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0077 Score=54.66 Aligned_cols=86 Identities=21% Similarity=0.130 Sum_probs=62.9
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCc---hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNAD---KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
++||+.++|+.|+ ++++++||+. .......++.+|+...++.++++.
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~--------------------------- 97 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS--------------------------- 97 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH---------------------------
Confidence 3477777777664 7899999987 333344567788877777777754
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
......++..+....+.++++++..+.+.++.+|+.++.
T Consensus 98 -------------------------~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 -------------------------FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred -------------------------HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 455566776666555568888888999999999998654
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0079 Score=62.29 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=83.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.. +.+++..++... +..++...
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~---------------~~~el~~~- 611 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAM---------------DDAALARE- 611 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhC---------------CHHHHHHH-
Confidence 56788888888885 8899999999999999999999852 233433332210 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~-- 252 (290)
...-.++..-.|+-=..+.+.++-..+-+.|+||+.||..+.+.|.+. |.++.+.+ +.-+|.++
T Consensus 612 -----------v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLld 679 (903)
T PRK15122 612 -----------VEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSGADIAKESADIILLE 679 (903)
T ss_pred -----------hhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcccHHHHHhcCEEEec
Confidence 000011223334444444444444456799999999999999999986 44554443 55688886
Q ss_pred cCHhHHHHHhHH
Q 036723 253 ESIHNIKEALPE 264 (290)
Q Consensus 253 ~sl~el~~~l~~ 264 (290)
+++..+.+++.+
T Consensus 680 d~f~~Iv~ai~~ 691 (903)
T PRK15122 680 KSLMVLEEGVIK 691 (903)
T ss_pred CChHHHHHHHHH
Confidence 446666655543
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0093 Score=61.74 Aligned_cols=134 Identities=18% Similarity=0.223 Sum_probs=82.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.. +.+++..++... +..++...
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l---------------~~~el~~~- 611 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL---------------SDDELANL- 611 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC---------------CHHHHHHH-
Confidence 56788888888775 8899999999999999999999952 344444433210 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
+.+-.++..-.|+-=..+.+.++-...-+.|+||+.||..+.+.|.+. |.++.+.+ +.-+|.++-
T Consensus 612 -----------~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 612 -----------AERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIG-ISVDGAVDIAREAADIILLE 679 (902)
T ss_pred -----------HhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEE-EEeCCcCHHHHHhCCEEEec
Confidence 000011223333433444444444456799999999999999999985 44445433 556788764
Q ss_pred -CHhHHHHHhH
Q 036723 254 -SIHNIKEALP 263 (290)
Q Consensus 254 -sl~el~~~l~ 263 (290)
++..+.+.+.
T Consensus 680 d~~~~I~~ai~ 690 (902)
T PRK10517 680 KSLMVLEEGVI 690 (902)
T ss_pred CChHHHHHHHH
Confidence 4666655543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0084 Score=50.94 Aligned_cols=37 Identities=8% Similarity=-0.022 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCC-CCC-cEEEEcCCccchHHHHhcCCeE
Q 036723 200 EAFEQVFKIANI-NPR-KTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 200 ~~~~~il~~~~~-~~~-e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
++...+++.+.. ... -++.+|||.||+.+.......+
T Consensus 194 ~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~Af 232 (274)
T COG3769 194 QAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAF 232 (274)
T ss_pred HHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhhe
Confidence 444444443322 222 5999999999999997766543
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.028 Score=49.61 Aligned_cols=100 Identities=17% Similarity=0.201 Sum_probs=62.2
Q ss_pred CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCC-CCCccccccccccCCCCCccccccccCCCCCCCCCCCCC
Q 036723 113 PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNST-DKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRT 191 (290)
Q Consensus 113 ~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (290)
+..+++=|-|.++++...++.+++..+||.+++....... ......+..++..+....=.+|....-. +||
T Consensus 158 g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~-------LPK- 229 (297)
T PF05152_consen 158 GCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNN-------LPK- 229 (297)
T ss_pred CCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCC-------CCC-
Confidence 3567888999999999999999999999999886653321 1111122233333333333344332111 222
Q ss_pred CCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCc-cch
Q 036723 192 PVVCKPFEEAFEQVFKIANINP-RKTIFFDDSI-RNL 226 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~-~Di 226 (290)
.|......+++.|+.- +-+-.|+|-. ||+
T Consensus 230 ------SPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 230 ------SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ------CCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 1678888899999975 3455666666 554
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.11 Score=48.03 Aligned_cols=125 Identities=15% Similarity=0.083 Sum_probs=78.5
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhc---CCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRL---GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSR 181 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
....++..+.++.+.||.+-.+....+.+. +...+|+.++..-.-.. |..++ .-+++-...-+.
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~------------ff~e~-~vlreV~t~~g~ 272 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPG------------FFHEG-TVLREVEPQEGL 272 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCc------------ccccc-ceeeeecccccc
Confidence 555555666788999998877777666544 45567887665431110 11111 111111111223
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchH-HHHhcCCeEEEecCC
Q 036723 182 PNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLE-TGKRLGLHTVWVGTS 242 (290)
Q Consensus 182 ~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~-~a~~aGi~~i~v~~~ 242 (290)
+-..+-+.+....+++.+...+.++..++....+++++||+. .|+- .-+.-|+.++.+...
T Consensus 273 l~~g~~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 273 LKNGDNTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred ccccccCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence 333344444455677888888999999999889999999999 4754 456689998888554
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0061 Score=63.46 Aligned_cols=135 Identities=11% Similarity=0.026 Sum_probs=82.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+....-+..+.+..|+...-..+++..++... ..+....+++-.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l------------~~~el~~~i~~~ 646 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRL------------VYEEMDPILPKL 646 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhC------------CHHHHHHHhccC
Confidence 56788888888875 889999999999999999999986432334444433210 000000011101
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec-CCC--CCCCcceeec
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG-TSH--RAEGVDYALE 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~-~~~--~~~~ad~v~~ 253 (290)
..+ +.-.|+-=..+.+.++-..+.+.|+||+.||..+.+.|.+..+ ++ .+. ...-+|+++.
T Consensus 647 ~Vf---------------ar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIA-mg~~gtdvAk~aADivL~ 710 (941)
T TIGR01517 647 RVL---------------ARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFS-MGISGTEVAKEASDIILL 710 (941)
T ss_pred eEE---------------EECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCccee-cCCCccHHHHHhCCEEEe
Confidence 111 1222232223333333334569999999999999999998644 33 333 2556788877
Q ss_pred --CHhHHHHHh
Q 036723 254 --SIHNIKEAL 262 (290)
Q Consensus 254 --sl~el~~~l 262 (290)
++..+..++
T Consensus 711 dd~f~~I~~~i 721 (941)
T TIGR01517 711 DDNFASIVRAV 721 (941)
T ss_pred cCCHHHHHHHH
Confidence 677777666
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.014 Score=59.29 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=80.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.. .+++.+++..+.. ....+.+...+.+.-.
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~ 512 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT---NIYTADVLLKGDN------RDDLPSGELGEMVEDA 512 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC---CCcCHHHhcCCcc------hhhCCHHHHHHHHHhC
Confidence 66889998888875 8899999999999999999999864 1222222211000 0000000000000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES 254 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s 254 (290)
. ++..-.|+-=..+.+.++-..+-+.|+||+.||..+.+.|.+. |.++.+.+ +.-+|.++-+
T Consensus 513 ~---------------vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 513 D---------------GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGATDAARSAADIVLTE 576 (755)
T ss_pred C---------------EEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHHhCCEEEEc
Confidence 0 1122233333344444444556799999999999999999986 44444443 4557777543
Q ss_pred --HhHHHHHhH
Q 036723 255 --IHNIKEALP 263 (290)
Q Consensus 255 --l~el~~~l~ 263 (290)
+..+.+++.
T Consensus 577 d~l~~I~~ai~ 587 (755)
T TIGR01647 577 PGLSVIVDAIL 587 (755)
T ss_pred CChHHHHHHHH
Confidence 555555443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0082 Score=63.10 Aligned_cols=137 Identities=10% Similarity=0.063 Sum_probs=81.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc----------eeEEeecccCCCCCCccccccccccC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF----------ERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f----------~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
++.|++.+.++.++ ++++++|+....-+..+.+..|+.... ..+++..++...
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l-------------- 711 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL-------------- 711 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc--------------
Confidence 56788888888875 889999999999999999999985321 123333322210
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC--C
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH--R 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~--~ 244 (290)
...++-.... .-.+...-.|+-=..+.+.++-..+.+.|+||+.||..+.+.|++...+-..+. .
T Consensus 712 -~~~~l~~~~~------------~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~va 778 (1053)
T TIGR01523 712 -SDEEVDDLKA------------LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVA 778 (1053)
T ss_pred -CHHHHHHHhh------------cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHH
Confidence 0000000000 000112222333333334333334669999999999999999998644321333 2
Q ss_pred CCCcceeecC--HhHHHHHhH
Q 036723 245 AEGVDYALES--IHNIKEALP 263 (290)
Q Consensus 245 ~~~ad~v~~s--l~el~~~l~ 263 (290)
+.-+|+++.+ +..+.+++.
T Consensus 779 k~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 779 KDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred HHhcCEEEecCCHHHHHHHHH
Confidence 5568888755 777776653
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.016 Score=59.42 Aligned_cols=71 Identities=11% Similarity=0.109 Sum_probs=57.8
Q ss_pred CCCcHHHHHHHHH---HcCCCCCcEEEEcCCccchHHHHhcCC-------------eEEEecCCCCCCCcceeecCHhHH
Q 036723 195 CKPFEEAFEQVFK---IANINPRKTIFFDDSIRNLETGKRLGL-------------HTVWVGTSHRAEGVDYALESIHNI 258 (290)
Q Consensus 195 ~Kp~~~~~~~il~---~~~~~~~e~i~iGDs~~Di~~a~~aGi-------------~~i~v~~~~~~~~ad~v~~sl~el 258 (290)
+..|..+++.+++ .+|++++++++|||+.||..|++.++- -+|-|+ .....|.|.+++.+|+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~eV 837 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAEI 837 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHHH
Confidence 5677889999875 468999999999999999999998862 344554 3457789999999999
Q ss_pred HHHhHHHHH
Q 036723 259 KEALPELWE 267 (290)
Q Consensus 259 ~~~l~~~~~ 267 (290)
.++|..+-.
T Consensus 838 ~~lL~~L~~ 846 (854)
T PLN02205 838 VRLMQGLAS 846 (854)
T ss_pred HHHHHHHHh
Confidence 999988664
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.015 Score=60.29 Aligned_cols=137 Identities=16% Similarity=0.149 Sum_probs=82.6
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc--eeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF--ERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
-+|.|++.+.++.|+ ++++++|+....-+..+.+..|+...- +.++...++... ...++.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l---------------~~~el~ 610 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDAL---------------SDEELA 610 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhc---------------CHHHHH
Confidence 377888888888875 899999999999999999999976543 235555544321 111222
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCccee
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYA 251 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v 251 (290)
+....++ +...-.|+-=..+.+.++-...-+.|.||+.||+.|.+.|.+...+...|-+ ++-+|.+
T Consensus 611 ~~~~~~~------------VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadiv 678 (917)
T COG0474 611 ELVEELS------------VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIV 678 (917)
T ss_pred HHhhhCc------------EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceE
Confidence 2111111 1122223332333333333346699999999999999999997655554433 4446555
Q ss_pred ecC--HhHHHHHh
Q 036723 252 LES--IHNIKEAL 262 (290)
Q Consensus 252 ~~s--l~el~~~l 262 (290)
..+ +.-+..++
T Consensus 679 l~dd~~~~i~~av 691 (917)
T COG0474 679 LLDDNFATIVLAV 691 (917)
T ss_pred eecCcHHHHHHHH
Confidence 433 44444444
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.41 Score=45.92 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=26.4
Q ss_pred hhHHHHHHcCCCcEEEEeCCchHHHHHHHHh-cCCC
Q 036723 103 PVLRNLLLSLPIRKVIFTNADKTHAARVLSR-LGLE 137 (290)
Q Consensus 103 pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~-~gl~ 137 (290)
+...+....-+ +.+++|..++.+++..++. +|.+
T Consensus 99 ~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 99 MEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 44555555544 8999999999999999988 7754
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.048 Score=51.12 Aligned_cols=114 Identities=18% Similarity=0.189 Sum_probs=81.8
Q ss_pred HHHHHHHHhhcCCCCCCC--CChhHHHHHHcCC---CcEEEEeCC--chHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 83 CDDFHSYVHGRLPYMMLK--PDPVLRNLLLSLP---IRKVIFTNA--DKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~--~~pg~~~~L~~L~---~~~~ivT~~--~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
+..+.+...-.+..+... |.....++.+.+. .+++++|+. +.+..+..+...|.+..--.++.+.+..-
T Consensus 80 p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl---- 155 (635)
T COG5610 80 PLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL---- 155 (635)
T ss_pred cHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh----
Confidence 444444443344444433 3334556666553 788899886 67777888888886633333565555443
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCC
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGL 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi 234 (290)
.|.....|.++++.-++++.+.+++||+. .|+.++++.|+
T Consensus 156 ---------------------------------------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI 196 (635)
T COG5610 156 ---------------------------------------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGI 196 (635)
T ss_pred ---------------------------------------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccch
Confidence 58889999999999999999999999999 69999999999
Q ss_pred eEEEe
Q 036723 235 HTVWV 239 (290)
Q Consensus 235 ~~i~v 239 (290)
.|.+.
T Consensus 197 ~Tlf~ 201 (635)
T COG5610 197 STLFY 201 (635)
T ss_pred hHHHH
Confidence 88755
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.059 Score=56.60 Aligned_cols=140 Identities=11% Similarity=0.093 Sum_probs=78.8
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcce------------------------eEEeecccCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFE------------------------RIISFETLNST 152 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~------------------------~i~~~~~~~~~ 152 (290)
++.|++.+.++.++ ++++++|+.....+..+.+.+|+...-. .++++.++..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~- 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD- 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-
Confidence 56788888888875 7899999999999999999998842110 0111111110
Q ss_pred CCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 153 DKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
-...++-.....+ ...+...-.|+-=..+.+.++-...-|.++||+.||+.|.+.|
T Consensus 647 --------------l~~~el~~~~~~~----------~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~A 702 (997)
T TIGR01106 647 --------------MTSEQLDEILKYH----------TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA 702 (997)
T ss_pred --------------CCHHHHHHHHHhc----------CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhC
Confidence 0000111000000 0001122223333333333333335699999999999999999
Q ss_pred CCeEEEecCCC--CCCCcceeecC--HhHHHHHhHH
Q 036723 233 GLHTVWVGTSH--RAEGVDYALES--IHNIKEALPE 264 (290)
Q Consensus 233 Gi~~i~v~~~~--~~~~ad~v~~s--l~el~~~l~~ 264 (290)
.+..++-..|. .+.-+|+++.+ +.-+.+++.+
T Consensus 703 dVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~ 738 (997)
T TIGR01106 703 DIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE 738 (997)
T ss_pred CcceecCCcccHHHHHhhceEEecCCHHHHHHHHHH
Confidence 98644322333 25567888776 7777665433
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.051 Score=49.27 Aligned_cols=122 Identities=18% Similarity=0.270 Sum_probs=71.0
Q ss_pred ChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc-C--CCCcceeEE-eecccCCCCCCccccccccccCCC-CCccc
Q 036723 102 DPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL-G--LEDCFERII-SFETLNSTDKGTVLVDQDASESER-PTELF 173 (290)
Q Consensus 102 ~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~-g--l~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 173 (290)
.|....+|..|+ .+++++||.+..++..-+..+ | ..+.||.++ ..+... + |..+. +...+
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~--------F----ftde~rPfR~~ 309 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPE--------F----FTDERRPFRKY 309 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCc--------c----cccccCcchhh
Confidence 456667777774 779999999999998776665 3 335788754 333211 1 11111 22222
Q ss_pred ccc-ccCCCCCCCCCCCCCCCCCCCc-HHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-hcCCeEEEec
Q 036723 174 DID-DYCSRPNADLELPRTPVVCKPF-EEAFEQVFKIANINPRKTIFFDDSI-RNLETGK-RLGLHTVWVG 240 (290)
Q Consensus 174 ~~~-~~~~~~~~~~~~~~~~~~~Kp~-~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~-~aGi~~i~v~ 240 (290)
|-. +++. =...+-+-+ +|-- -..+...++..|+...++++|||++ +|+.... ..||.+-++-
T Consensus 310 dek~~sl~-wdkv~klek----gkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 310 DEKRGSLL-WDKVDKLEK----GKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred cccccchh-hhhhhhccc----CceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 211 0000 000000111 1111 2245677888899999999999999 8988776 8999987763
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.072 Score=53.88 Aligned_cols=108 Identities=17% Similarity=0.240 Sum_probs=69.6
Q ss_pred CCChhHHHHHHcC---CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSL---PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.+.|++...++.| +++++++|+.+...+..+.+..| ++.+++.- .
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev--~-------------------------- 770 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV--L-------------------------- 770 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc--C--------------------------
Confidence 4456666655544 58999999999999999999999 45555421 0
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC--CCCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH--RAEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~--~~~~ad~v~-- 252 (290)
+-.|.+.++.+.+ ....++||||+.||-.+.-.|.+. +.++.+. .-+-+|.++
T Consensus 771 ------------------P~~K~~~Ik~lq~----~~~~VaMVGDGINDaPALA~AdVG-Iaig~gs~vAieaADIVLmr 827 (951)
T KOG0207|consen 771 ------------------PEQKAEKIKEIQK----NGGPVAMVGDGINDAPALAQADVG-IAIGAGSDVAIEAADIVLMR 827 (951)
T ss_pred ------------------chhhHHHHHHHHh----cCCcEEEEeCCCCccHHHHhhccc-eeeccccHHHHhhCCEEEEc
Confidence 1222345555444 335699999999999988888775 3333333 344466663
Q ss_pred cCHhHHHHHh
Q 036723 253 ESIHNIKEAL 262 (290)
Q Consensus 253 ~sl~el~~~l 262 (290)
+++.++...+
T Consensus 828 n~L~~v~~ai 837 (951)
T KOG0207|consen 828 NDLRDVPFAI 837 (951)
T ss_pred cchhhhHHHH
Confidence 4455554443
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.077 Score=45.91 Aligned_cols=45 Identities=7% Similarity=-0.023 Sum_probs=40.5
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
|.+.|+.+.+++|-+.-..++|||+..--.+|+..+++++-+...
T Consensus 215 K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h 259 (274)
T TIGR01658 215 KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLH 259 (274)
T ss_pred hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecC
Confidence 369999999999997889999999999999999999999888653
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.036 Score=55.52 Aligned_cols=143 Identities=15% Similarity=0.124 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee----EEeecccCCCCCCccccccccccCCCCCc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER----IISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
-+|.|++.+.++.++ +++..+|+....-+..+..+.|+...-+. .++..+ |+...+++
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~e---------------fD~ls~~~ 647 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSE---------------FDDLSDEE 647 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhh---------------hhcCCHHH
Confidence 378888888888775 89999999999999999999997543332 222221 22222222
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD 249 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad 249 (290)
+-+.+. ...++..-.|+-=..+.+.++-..+=+.|-||+.||..+.|.|.+..++--.|-+ +..+|
T Consensus 648 ~~~~~~------------~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 648 LDDAVR------------RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred HHHHhh------------cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 222111 1111111222333333444444446699999999999999999986443324433 56678
Q ss_pred eeecCHhHHHHHhHHHHHhh
Q 036723 250 YALESIHNIKEALPELWEVA 269 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~~~~~ 269 (290)
.|+.+ +++..++.-+-|++
T Consensus 716 MVL~D-DnFstIvaAVEEGr 734 (972)
T KOG0202|consen 716 MVLAD-DNFSTIVAAVEEGR 734 (972)
T ss_pred cEEec-CcHHHHHHHHHHhH
Confidence 77665 44444444444444
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.06 Score=40.37 Aligned_cols=48 Identities=27% Similarity=0.269 Sum_probs=33.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCch---HHHHHHHHhcCCCCcceeEEeec
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADK---THAARVLSRLGLEDCFERIISFE 147 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~---~~~~~~l~~~gl~~~f~~i~~~~ 147 (290)
.+.||+.++++.|+ .+++++||+.. ......++.+|+.-..+.++++.
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~ 67 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG 67 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence 46788888888885 78999999853 34455668889886667777764
|
... |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.14 Score=47.30 Aligned_cols=75 Identities=15% Similarity=0.130 Sum_probs=58.9
Q ss_pred CCCcHHHHHHHHHHcCCCC---CcEEEEcCCccchHHHHhcC----CeEEEecCCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 195 CKPFEEAFEQVFKIANINP---RKTIFFDDSIRNLETGKRLG----LHTVWVGTSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~---~e~i~iGDs~~Di~~a~~aG----i~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
+-.|..+++.+++.++... .-.+|+||..+|-.+++.+. -..|.|+.......|.|.+.+.+|+.++|..|.+
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 3466899999999998753 35899999999999998762 2356676534457789999999999999988865
Q ss_pred hh
Q 036723 268 VA 269 (290)
Q Consensus 268 ~~ 269 (290)
-.
T Consensus 361 ~~ 362 (366)
T PLN03017 361 WK 362 (366)
T ss_pred HH
Confidence 44
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.1 Score=48.00 Aligned_cols=73 Identities=21% Similarity=0.219 Sum_probs=57.4
Q ss_pred CCcHHHHHHHHHHcCCCCC---cEEEEcCCccchHHHHhc-----CCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 196 KPFEEAFEQVFKIANINPR---KTIFFDDSIRNLETGKRL-----GLHTVWVGTSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~---e~i~iGDs~~Di~~a~~a-----Gi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
-.|..+++.+++.++.... -.+|+||-.+|-.+++.+ |+ .|.|+.+.....|.|.+++.+++.++|..+.+
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 4578999999999886533 389999999999998865 33 45666544567799999999999999988765
Q ss_pred hh
Q 036723 268 VA 269 (290)
Q Consensus 268 ~~ 269 (290)
-.
T Consensus 347 ~~ 348 (354)
T PLN02151 347 WK 348 (354)
T ss_pred hh
Confidence 44
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.15 Score=44.48 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=35.0
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE 137 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~ 137 (290)
+..+.+.+.+.+ ..+.+.+|+.++++.|. +++.|+|.|-...++.++...+..
T Consensus 75 l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~ 130 (246)
T PF05822_consen 75 LTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF 130 (246)
T ss_dssp -BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--
T ss_pred cCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC
Confidence 345555555544 45778889999988774 889999999999999999988654
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.14 Score=54.28 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=45.2
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC---CCCCcceeecCHhHHHHHh
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH---RAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~---~~~~ad~v~~sl~el~~~l 262 (290)
+-|.++++.+.+.. ..-++++||+.||+.|.+.|.+.. ++...+ ....+|+++.++..|..++
T Consensus 754 ~qK~~IV~~lk~~~---~~~vl~iGDG~ND~~mlk~AdVGI-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 754 SQKADVVRLVKKST---GKTTLAIGDGANDVSMIQEADVGV-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred HHHHHHHHHHHhcC---CCeEEEEeCCCccHHHHhhcCeee-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 55556665554432 356999999999999999999854 543333 3445899999888888766
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.083 Score=41.36 Aligned_cols=15 Identities=40% Similarity=0.494 Sum_probs=13.1
Q ss_pred cEEEEecCCCcccCC
Q 036723 16 DCLLFDLDDTIYPLT 30 (290)
Q Consensus 16 k~viFDlDGTL~d~~ 30 (290)
|+|+||+||||++..
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 799999999999743
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.27 Score=47.57 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=64.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+........+-+.+|+ + ....
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~--~~~~-------------------------- 391 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F--ARVT-------------------------- 391 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e--eccC--------------------------
Confidence 56788888887775 77999999999999988888886 1 1111
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~s 254 (290)
|+--..+.+++.-....+.++||+.||..+.+.+++. ++++ ....+|.++.+
T Consensus 392 ----------------------p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advg-ia~~---a~~~adivl~~ 443 (499)
T TIGR01494 392 ----------------------PEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVG-IAMG---AKAAADIVLLD 443 (499)
T ss_pred ----------------------HHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCc-cccc---hHHhCCeEEec
Confidence 1222233333333336799999999999999999875 3333 33447777665
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.06 Score=57.26 Aligned_cols=63 Identities=10% Similarity=0.046 Sum_probs=45.3
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC---CCCCcceeecCHhHHHHHh
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH---RAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~---~~~~ad~v~~sl~el~~~l 262 (290)
+-|.++.+.+.+.. ..-++++||+.||+.|.+.|.+.. ++...+ +..-+|+.+..+..|..+|
T Consensus 857 ~QKa~IV~~vk~~~---~~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 857 LQKAGIVALVKNRT---SDMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred HHHHHHHHHHHhcC---CcEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHH
Confidence 55556666554433 245999999999999999998753 554433 2445899999998888766
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.52 Score=49.96 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=32.9
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED 138 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~ 138 (290)
++.|++.+.++.|+ ++++++|+....-+..+.+..|+..
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVN 697 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 56788888888775 8899999999988888999999854
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.074 Score=42.65 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC
Q 036723 211 INPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 211 ~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~ 244 (290)
..++|+++|||++ +||.+|+..|--.+|...+-.
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 6899999999999 899999999999999987764
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.35 Score=39.25 Aligned_cols=21 Identities=14% Similarity=0.105 Sum_probs=19.2
Q ss_pred cEEEEcCCccchHHHHhcCCe
Q 036723 215 KTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 215 e~i~iGDs~~Di~~a~~aGi~ 235 (290)
=...+|.+.+|+.+=+++|++
T Consensus 121 f~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 121 FYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred EEEecCCcHHHHHHHHHcCCC
Confidence 377899999999999999998
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.94 Score=40.21 Aligned_cols=51 Identities=20% Similarity=0.115 Sum_probs=38.2
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHH---HHHHHHh-cCCCCcceeEEeec
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTH---AARVLSR-LGLEDCFERIISFE 147 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~---~~~~l~~-~gl~~~f~~i~~~~ 147 (290)
..-.++||+.++|+.|+ .+.+++||+++.. ....++. +++....+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 45578999999999886 7899999985443 3445555 66667788888876
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=93.09 E-value=1 Score=42.86 Aligned_cols=39 Identities=26% Similarity=0.257 Sum_probs=35.6
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
-|+.+-++.+++++|+..+-.+|++|++...+.-+.-+-
T Consensus 310 ~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 310 DPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred CcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 788899999999999999999999999988888888774
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.1 Score=39.06 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=21.2
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcc
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEA 54 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~ 54 (290)
++||+||||+++...+.. ..++++. +...|.+..
T Consensus 1 ~l~D~dGvl~~g~~~ipg-a~e~l~~--L~~~g~~~~ 34 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPG-AVEALDA--LRERGKPVV 34 (101)
T ss_dssp EEEESTTTSEETTEE-TT-HHHHHHH--HHHTTSEEE
T ss_pred CEEeCccEeEeCCCcCcC-HHHHHHH--HHHcCCCEE
Confidence 689999999996555444 3445555 444455443
|
... |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.63 Score=41.41 Aligned_cols=83 Identities=17% Similarity=0.192 Sum_probs=53.1
Q ss_pred ChhHHHHHHcCC---CcEEEEeCCc---hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 102 DPVLRNLLLSLP---IRKVIFTNAD---KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 102 ~pg~~~~L~~L~---~~~~ivT~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+||+.++|+.|+ .+++++||+. +......+.++|+....+.++++.
T Consensus 20 ~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~---------------------------- 71 (279)
T TIGR01452 20 VPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA---------------------------- 71 (279)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH----------------------------
Confidence 456667776664 7789999864 333345678888865556666654
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
......+++.+....+++++|+. ...+.++..|+..+
T Consensus 72 ------------------------~~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 72 ------------------------LCAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred ------------------------HHHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 44445555544445679999986 33455667787644
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.12 Score=43.49 Aligned_cols=27 Identities=33% Similarity=0.509 Sum_probs=21.5
Q ss_pred EEEEecCCCcccCC-CChHHHHHHHHHH
Q 036723 17 CLLFDLDDTIYPLT-SGLSKEVTKNIQE 43 (290)
Q Consensus 17 ~viFDlDGTL~d~~-~~~~~~~~~~i~~ 43 (290)
+|+||+||||++.. ..+.....+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 48999999999865 5677777777777
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.02 E-value=0.97 Score=43.42 Aligned_cols=86 Identities=16% Similarity=0.233 Sum_probs=64.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
...||+.|-+.+|+ ++++.+|+.++.-...+.+..|++++.. +
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA-----e----------------------------- 492 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA-----E----------------------------- 492 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh-----c-----------------------------
Confidence 45689999888776 8999999999988898999999876541 1
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.+| +-=..+.++.+...+=+.|.||+-||..+.-.+....++.
T Consensus 493 ------------------atP--EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 493 ------------------ATP--EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred ------------------CCh--HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 244 2223445555556677999999999999999988754443
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.04 E-value=1.4 Score=40.54 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=37.1
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
|...|+.|.+++|- .-..++|||+.-.-.+|++..|++.-+..
T Consensus 410 KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 410 KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeecc
Confidence 35899999999997 56788999999889999999999876644
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.60 E-value=1.1 Score=39.19 Aligned_cols=51 Identities=14% Similarity=0.096 Sum_probs=33.4
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcC
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLG 135 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~g 135 (290)
++...+.+.+.+ ..+.+..|..++++.|. +++.++|.+....++.++....
T Consensus 123 f~k~~I~~~Va~----s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~ 176 (298)
T KOG3128|consen 123 FSKNAIDDIVAE----SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL 176 (298)
T ss_pred cCHHHHHHHHHH----hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh
Confidence 344555555443 33445567777766664 8999999998888887765543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=84.82 E-value=2.1 Score=40.06 Aligned_cols=34 Identities=6% Similarity=0.157 Sum_probs=25.3
Q ss_pred CCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHh
Q 036723 100 KPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSR 133 (290)
Q Consensus 100 ~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~ 133 (290)
.+.|++.+.|+.|. .+++|||+.+...+...+.-
T Consensus 141 ~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 141 LMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred cCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 44467777777774 57999999998888776643
|
|
| >PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function | Back alignment and domain information |
|---|
Probab=83.44 E-value=0.47 Score=32.05 Aligned_cols=25 Identities=24% Similarity=0.413 Sum_probs=16.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 202 FEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 202 ~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
++++++++|+ +|++||..+|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5788999999 999999999999875
|
; PDB: 2NN4_A. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=81.61 E-value=1.5 Score=38.15 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=19.7
Q ss_pred ccEEEEecCCCcccCCC-----ChHHHHHHHHHH
Q 036723 15 YDCLLFDLDDTIYPLTS-----GLSKEVTKNIQE 43 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~-----~~~~~~~~~i~~ 43 (290)
..+++||+||||++... .......+.+++
T Consensus 3 ~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~ 36 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQK 36 (244)
T ss_pred cEEEEEecCccccCCcCCCcccCCCHHHHHHHHH
Confidence 56899999999997422 234555555555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 290 | ||||
| 3nuq_A | 282 | Structure Of A Putative Nucleotide Phosphatase From | 5e-14 | ||
| 3onn_A | 263 | Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc | 8e-14 | ||
| 3opx_A | 263 | Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt | 6e-13 |
| >pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282 | Back alignment and structure |
|
| >pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263 | Back alignment and structure |
|
| >pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 7e-45
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 54/276 (19%)
Query: 5 NENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLY 64
+ + N FD+D+ +Y ++ + + ++I + L + L S Y
Sbjct: 47 DISATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYY 106
Query: 65 KFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSLP-----IRKVI 118
K YG + G + ++ + +++ V LP +LKPD LRN+LL L + +
Sbjct: 107 KEYGLAIRG-LVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWL 165
Query: 119 FTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDY 178
FTNA K HA R L LG+ D F+ + + +
Sbjct: 166 FTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT--------------------------- 198
Query: 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKT-IFFDDSIRNLETGKRLGLHTV 237
+VCKP +AFE+ K + + + F DDS +N+ETG +LG+ T
Sbjct: 199 ------------DTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTC 246
Query: 238 WVGTSH-------RAEGVDYALESIHNIKEALPELW 266
+ + + I + + +L+
Sbjct: 247 IHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 282
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 65.4 bits (159), Expect = 1e-12
Identities = 37/275 (13%), Positives = 88/275 (32%), Gaps = 72/275 (26%)
Query: 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSL----YKFYG 68
Q + FD DDT++ + + + + + L + ++++ + +++ K +G
Sbjct: 11 QAIQLVGFDGDDTLWK-SEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFG 69
Query: 69 TTLAGLRAIGYQFDCDDFHSYVHGRLPYMML-----------KPDPVLRNLLLSLP--IR 115
G+ + + + + R ++ + +R + ++
Sbjct: 70 YGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIAADYA 129
Query: 116 KVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175
V+ T D H + + + GL D F RI
Sbjct: 130 VVLITKGDLFHQEQKIEQSGLSDLFPRIE------------------------------- 158
Query: 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIR-NLETGKRLGL 234
VV + + + +V ++ + + +S+R ++E +G
Sbjct: 159 -----------------VVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGG 201
Query: 235 HTVWVGTSHRAEGVDYALESIHNIKEALPELWEVA 269
++ V +A E H + P L EV
Sbjct: 202 WGIYTPY-----AVTWAHEQDHGVAADEPRLREVP 231
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 3e-12
Identities = 30/228 (13%), Positives = 61/228 (26%), Gaps = 48/228 (21%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG 73
L +D+ + LT+G +E ++ + + L T
Sbjct: 3 TIKALFWDIGGVL--LTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEY 60
Query: 74 LRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVL 131
L + + D + +P P + L L R N + +
Sbjct: 61 LEQVVFYQPRDFTPEDFRAVME-EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRI 119
Query: 132 SRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRT 191
GL + + S +
Sbjct: 120 RTFGLGEFLLAFFT------------------SSALG----------------------- 138
Query: 192 PVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
V KP + +A + P + + DD ++N++ + +G+H V
Sbjct: 139 --VMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 6e-11
Identities = 48/272 (17%), Positives = 88/272 (32%), Gaps = 63/272 (23%)
Query: 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG- 73
+ FDLDDT+ + I+ + L ++ + L K YG+
Sbjct: 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYH 61
Query: 74 ----LRAIGYQFD----CDDFHSYVHGRLPYMMLKPD--PVLRNLLLSLPIRKVIFTNAD 123
LR + ++ +Y + + Y+ P VL L L I T+ +
Sbjct: 62 FDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIR-LKELGYELGIITDGN 120
Query: 124 KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPN 183
+ RL L+D FE +I +
Sbjct: 121 PVKQWEKILRLELDDFFEHVIISDFEG--------------------------------- 147
Query: 184 ADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKRLGLHTVWVGTS 242
V KP + F++ K N+ P + + D + + + KR+G+ TVW
Sbjct: 148 ----------VKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG 197
Query: 243 HR-------AEGVDYALESIHNIKEALPELWE 267
+ DY ++++ ++ E L
Sbjct: 198 KHSERELEYRKYADYEIDNLESLLEVLARESS 229
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 8e-11
Identities = 35/202 (17%), Positives = 58/202 (28%), Gaps = 69/202 (34%)
Query: 73 GLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSL---PIRKVIFTNADKTHAAR 129
G+R + D+ + G + RNLL + + VI +N A
Sbjct: 1 GMRGL-----IVDYAGVLDG-----TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAA 50
Query: 130 VLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELP 189
+ L ++++ S + G
Sbjct: 51 PIRELETNGVVDKVLL-----SGELG---------------------------------- 71
Query: 190 RTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVD 249
V KP E AF+ ++ R + DDSI N+ GL V+ RA
Sbjct: 72 ----VEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRA---- 123
Query: 250 YALESIHNIKEALPELWEVAGE 271
+ L+ + GE
Sbjct: 124 ---------VVEIVGLFGLEGE 136
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 2e-10
Identities = 39/274 (14%), Positives = 76/274 (27%), Gaps = 44/274 (16%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYK-------- 65
L LD+ + ++E+ +L + +A + L +L+
Sbjct: 129 NEQLPLQFLDNVKVG-----KNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQE 183
Query: 66 FYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNA 122
+Y + Y++ + L+P ++ LL L I T
Sbjct: 184 WYLGSKLYEDVEKKIARTTFKTGYIYQEII---LRPVDEVKVLLNDLKGAGFELGIATGR 240
Query: 123 DKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRP 182
T LGL FE AS+ ++ +P
Sbjct: 241 PYTETVVPFENLGLLPYFEADFIA---------------TASDVLEAENMYPQARPLGKP 285
Query: 183 NADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV--- 239
N + + +N DS+ +L + +++G +
Sbjct: 286 NPFS-YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344
Query: 240 --GTSHRAE----GVDYALESIHNIKEALPELWE 267
G E DY + + ++ L L E
Sbjct: 345 LKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-09
Identities = 42/281 (14%), Positives = 85/281 (30%), Gaps = 74/281 (26%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVP------ELCVSLYKFY 67
+ + FDLD+T+ + + + I+ + EEA++ +L + Y
Sbjct: 17 RVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPY 76
Query: 68 GTTLAGLR---------AIGYQFDCDD-----FHSYVHGRLPYMMLKPD--PVLRNLLLS 111
T + +R D + + RL +M+L D +L L
Sbjct: 77 STCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKE 136
Query: 112 LPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTE 171
+ + ++ TN D+ + + F+ I+ ++
Sbjct: 137 VRL--LLLTNGDRQTQREKIEACACQSYFDAIVI-----GGEQK---------------- 173
Query: 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGK 230
KP F + + P + D++ ++ G
Sbjct: 174 ----------------------EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGL 211
Query: 231 RLGLH-TVWVGTSHRAEGV-----DYALESIHNIKEALPEL 265
GL TVW+ S R Y + S+ + L +
Sbjct: 212 NAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI 252
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-09
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
+ KP E F+ V + A I+P++T F DDS N + + LG+ T
Sbjct: 171 MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP 216
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 5e-09
Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 47/170 (27%)
Query: 74 LRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARV 130
A+ ++ + + + P + ++ L R V+ +N ++ H
Sbjct: 65 AEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFW 124
Query: 131 LSRL-GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELP 189
+ D + I S D G
Sbjct: 125 PEEYPEIRDAADHIYL-----SQDLG---------------------------------- 145
Query: 190 RTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
+ KP ++ V + +P T+FFDD+ N+E +LG+ ++ V
Sbjct: 146 ----MRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 6e-09
Identities = 39/272 (14%), Positives = 83/272 (30%), Gaps = 71/272 (26%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG---- 73
+ FD T+ + + + I E +L + + + L + + AG
Sbjct: 5 VFFDSLGTLNSVEG--AAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYR 62
Query: 74 -------------LRAIGYQFDCDDFHSYVHGRLPYMMLKPD--PVLRNLLLSLPIRKVI 118
G+++ + + + Y L P+ VL++L + +
Sbjct: 63 PLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLKGKYHV--GM 120
Query: 119 FTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDY 178
T++D A L LG++D F+ I + E
Sbjct: 121 ITDSDTEQAMAFLDALGIKDLFDSITTSEEAG---------------------------- 152
Query: 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKRLGLHTV 237
KP FE K A + + ++ D+ K LG+ ++
Sbjct: 153 ---------------FFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197
Query: 238 WV----GTSHRAEGVDYALESIHNIKEALPEL 265
+ + D+ + + + + + EL
Sbjct: 198 LLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 9e-09
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KP E+ F ++ + + P +T+F DD N+ T +RLG HT
Sbjct: 148 KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP 193
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 9e-09
Identities = 46/274 (16%), Positives = 74/274 (27%), Gaps = 68/274 (24%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEA-------KVPELCVSLYKF 66
KY L FDLDDTI+ + + Q+Y + + Y
Sbjct: 4 KYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGE 63
Query: 67 YGTTLAGLRAIGYQFDCDDFH------------SYVHGRLPYMMLKPD--PVLRNLLLSL 112
T L + + + L P VL L+
Sbjct: 64 GKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLE--YLAP 121
Query: 113 PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172
I +N + +R + G++ F++II E L
Sbjct: 122 QYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG---------------------- 159
Query: 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKR 231
V KP E F R+++ DS +
Sbjct: 160 ---------------------VLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHG 198
Query: 232 LGLHTVWVGTSHRAEGVDYALESIHNIKEALPEL 265
+G+H + + R IH++KE L L
Sbjct: 199 VGMHQAFYNVTERTVFPFQPTYHIHSLKE-LMNL 231
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-08
Identities = 45/276 (16%), Positives = 80/276 (28%), Gaps = 64/276 (23%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY---GTT 70
+Y LLFD+DDTI + + + ++ + +A+ + L++ + T
Sbjct: 6 RYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMT 65
Query: 71 LAGLR---------AIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLL--LSLPIRKVIF 119
+ GY+ D L + +L+ L I
Sbjct: 66 RDEVVNTRFSALLKEYGYEADGALLEQKYRRFLEEGH-QLIDGAFDLISNLQQQFDLYIV 124
Query: 120 TNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYC 179
TN + L GL F+ I E
Sbjct: 125 TNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG----------------------------- 155
Query: 180 SRPNADLELPRTPVVCKPFEEAFEQVF-KIANINPRKTIFFDDSIRN-LETGKRLGLHTV 237
KP +E F VF +I + T+ DS+ ++ G+ GL T
Sbjct: 156 --------------FQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTC 201
Query: 238 WVGTSHRAEG----VDYALESIHNIKEALPELWEVA 269
W+ + Y + + + L V+
Sbjct: 202 WMNPDMKPNVPEIIPTYEIRKLEELYHILNIENTVS 237
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-08
Identities = 33/275 (12%), Positives = 85/275 (30%), Gaps = 66/275 (24%)
Query: 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEA------KVPELCVSLYKF 66
++ + FD+ +T+ L L + + + L + A ++ ++ +
Sbjct: 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASED 61
Query: 67 YGTTLAG-LRAIGYQFDCD-----DFHSYVHGRLPYMMLKPD--PVLRNLLLSLPIRKVI 118
L G A+ + D + + ++ L+ + ++ +
Sbjct: 62 PRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVK-ERGLKTAV 120
Query: 119 FTNADKTHAAR---VLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175
N + +L R GL + ++ + +
Sbjct: 121 IGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL------------------------- 155
Query: 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKRLGL 234
KP +E FE+V + P +++ D+ + +++G+
Sbjct: 156 ------------------SYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGM 197
Query: 235 HTVWVGTSHRA----EGVDYALESIHNIKEALPEL 265
VW+ E + + SI N+K+ + +
Sbjct: 198 WAVWINQEGDKVRKLEERGFEIPSIANLKDVIELI 232
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 1e-07
Identities = 63/375 (16%), Positives = 110/375 (29%), Gaps = 112/375 (29%)
Query: 1 MEYKNEN-KQVSNQKY----DCLLFDLDDTIYPLTSGLSKEVTKNIQE---------YML 46
+Y+ ++ V + DC D+ D + LSKE +I +
Sbjct: 14 HQYQYKDILSVFEDAFVDNFDC--KDVQDMPKSI---LSKEEIDHIIMSKDAVSGTLRLF 68
Query: 47 QKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFH-----------SYV--HGR 93
L ++ ++ + KF L I Y+F Y+ R
Sbjct: 69 WTLLSKQEEM------VQKFVEEVL----RINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 94 L--------PYMMLKPDPV--LRNLLLSL-PIRKVIF---TNADKTH-AARVLSRLGLED 138
L Y + + P LR LL L P + V+ + KT A V ++
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178
Query: 139 CFE-RI--ISFETLNSTD---------------KGTVLVDQDA-------SESERPTELF 173
+ +I ++ + NS + T D + S L
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 174 DIDDYCSRPNADLELP--RTPVVCKPFE--------EAFEQVFKIANINPRKTIFFDDSI 223
Y N L L + F F+QV + I D
Sbjct: 239 KSKPY---ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 224 RNLETGKRLGLHTVWVGTS-----HRAEGVDYALESIHNIKEAL---PELWEVAGENSES 275
L + L ++ + SI I E++ W +N +
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI--IAESIRDGLATW----DNWKH 349
Query: 276 ISYSGKVS--IETSV 288
++ K++ IE+S+
Sbjct: 350 VNCD-KLTTIIESSL 363
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 1e-04
Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 52/222 (23%)
Query: 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA 72
KY + ++ + S + K EY L + ++ +P+ F L
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK------TFDSDDLI 465
Query: 73 GLRAIGYQFDCDDFHSYVHGRLPYMMLKPDP-----VLRNLLLSLPI--RKVIFTNADKT 125
Y F+S+ + + + + + R + L +K+ +
Sbjct: 466 PPYLDQY------FYSH----IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN 515
Query: 126 HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185
+ +L+ L ++ I D D + I D+ + +
Sbjct: 516 ASGSILNTLQQLKFYKPYIC--------------DNDPKYERL---VNAILDFLPKIEEN 558
Query: 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLE 227
L +C + + + +IA + + I F+++ + ++
Sbjct: 559 L-------ICSKYTD----LLRIALMAEDEAI-FEEAHKQVQ 588
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 1e-07
Identities = 37/278 (13%), Positives = 76/278 (27%), Gaps = 76/278 (27%)
Query: 13 QKYDCLLFDLDDTIY---PLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGT 69
+ + FD DDT++ P + K+ T ++ Y K A + + ++ + G
Sbjct: 6 ELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKE--ISAALFQTEMNNLQILGY 63
Query: 70 TLAGLRAIGYQFDCDDFHS-------------YVHGRLPYMMLKPD--PVLRNLLLSLPI 114
+ + + L P L+ L +
Sbjct: 64 GAKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKY 123
Query: 115 RKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174
+ V+ T D L R GL F+ I
Sbjct: 124 KLVVATKGDLLDQENKLERSGLSPYFDHIE------------------------------ 153
Query: 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKRLG 233
V+ E+ + ++ I I P + + +S ++ ++ LG
Sbjct: 154 ------------------VMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLG 195
Query: 234 LHTVWVGT------SHRAEGVDYALESIHNIKEALPEL 265
+ V + L+ + + + L L
Sbjct: 196 GYGVHIPFEVMWKHEVTETFAHERLKQVKRLDD-LLSL 232
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-06
Identities = 40/287 (13%), Positives = 86/287 (29%), Gaps = 57/287 (19%)
Query: 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTK------NIQEYMLQKLCIEEA 54
M+YK+++ ++ + +FD T+ + S + + + + Q+ +E +
Sbjct: 1 MDYKDDDDKLVD-SLRACVFDAYGTLLDVHSAVMRNADEVGASAEALSMLWRQRQ-LEYS 58
Query: 55 KVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRL-PYMMLKPDPVLRNLLLSLP 113
L F+ T L + +D + Y L P L L
Sbjct: 59 WTRTLMHQYADFWQLTDEALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLK 118
Query: 114 IRK---VIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPT 170
I +N + L L+ + +S + L
Sbjct: 119 SAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLK-------------------- 158
Query: 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK 230
+ KP ++ +NP + F + +L
Sbjct: 159 -----------------------IYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAG 195
Query: 231 RLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEVAGENSESIS 277
+ G +TV + + + +Y + + +L ELW + +N +
Sbjct: 196 KFGFNTVRI--NRQGNPPEYEFAPLKHQVNSLSELWPLLAKNVTKAA 240
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 28/265 (10%), Positives = 63/265 (23%), Gaps = 62/265 (23%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQ----------KLCIEEAKVPELCVSL 63
KY +L D +T+ ++V + +++ + P+
Sbjct: 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLE 61
Query: 64 YKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPD--PVLRNLLLSLPIRKVIFTN 121
+ L L + + L D L L S + + +N
Sbjct: 62 HVDPKDFLYILGIYPSERLVKELKEADIRDGEAF-LYDDTLEFLEGLK-SNGYKLALVSN 119
Query: 122 ADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSR 181
A +L + L+ F+ + S +
Sbjct: 120 AS-PRVKTLLEKFDLKKYFDALAL-----SYEIK-------------------------- 147
Query: 182 PNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKRLGLHTVWVG 240
KP + F + D KR + + +
Sbjct: 148 ------------AVKPNPKIFGFALAKVGY---PAVHVGDIYELDYIGAKRSYVDPILLD 192
Query: 241 TSHRAEGVDYALESIHNIKEALPEL 265
V ++++ + + E+
Sbjct: 193 RYDFYPDVRDRVKNLREALQKIEEM 217
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 6e-05
Identities = 22/165 (13%), Positives = 41/165 (24%), Gaps = 49/165 (29%)
Query: 114 IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173
++ I T+ A L L L+ I++ +
Sbjct: 108 LKWCIATSGGIDTATINLKALKLDINKINIVT-----------------RDDVSYG---- 146
Query: 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233
KP + F K + + D+I ++ +R
Sbjct: 147 ----------------------KPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCK 184
Query: 234 LHTVWV--GTSHRAE----GVDYALESIHNIKEALPELWEVAGEN 272
V + G E G E ++ L E+ G +
Sbjct: 185 ATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIASREGHH 229
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 9e-05
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK 230
ELFD+ Y + FE++ + I + IFFDD RN+
Sbjct: 104 ELFDLFRYFVHRE---------IYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVS 154
Query: 231 RLGLHTVWV 239
+LG+ + +
Sbjct: 155 KLGVTCIHI 163
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 1e-04
Identities = 37/230 (16%), Positives = 72/230 (31%), Gaps = 52/230 (22%)
Query: 18 LLFDLDDTIYPLTSGLSK------EVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL 71
++FD T++ + S + I + QK +E + + L F+ T
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQ-LEYSWLRALMGRYADFWSVTR 63
Query: 72 AGLRAIGYQFDCDDFHSYVHG-RLPYMMLKPDPVLRNLLLSL-PIRKVIFTNADKTHAAR 129
L + S++ Y L P P L L P+++ I +N
Sbjct: 64 EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQA 123
Query: 130 VLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELP 189
+++ GL D F+ +IS +
Sbjct: 124 LVANAGLTDSFDAVISVDAKR--------------------------------------- 144
Query: 190 RTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
V KP +++ V ++ + P + +F + ++ K G V
Sbjct: 145 ----VFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV 190
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 2e-04
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 65/273 (23%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTK------NIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL 71
+ FDL T++ + S + + I QK +E + L F T
Sbjct: 7 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQ-LEYTWLRSLMNRYVNFQQATE 65
Query: 72 AGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPV-----LRNLLLSLPIRKVIFTNADKTH 126
LR D + L L+ P L ++ I +N
Sbjct: 66 DALRFTCRHLG-LDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 124
Query: 127 AARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADL 186
V+S GL D F+ ++S + + Y
Sbjct: 125 IDAVVSHAGLRDGFDHLLSVD--------------------------PVQVY-------- 150
Query: 187 ELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAE 246
KP +E + ++ +F + + + G T W+ +R
Sbjct: 151 ---------KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWI---NRTG 198
Query: 247 GVDYALE-----SIHNIKEALPELWEVAGENSE 274
V + + +++ + EL+E A +E
Sbjct: 199 NVFEEMGQTPDWEVTSLRA-VVELFETAAGKAE 230
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 2e-04
Identities = 35/282 (12%), Positives = 77/282 (27%), Gaps = 80/282 (28%)
Query: 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVP--------ELCVSLYKFYG 68
L +D+ DT+ L L + + + L+ +E + + S +
Sbjct: 3 LLTWDVKDTLLRLRHPLGEAYATKARAHGLE---VEPSALEQGFRQAYRAQSHSFPNYGL 59
Query: 69 TTLAG------------LRAIGYQFD------CDDFHSYVHGRLPYMMLKPD--PVLRNL 108
+ G Q + + + + LR
Sbjct: 60 SHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQ-VLDGAEDTLREC 118
Query: 109 LLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESER 168
+ +R + +N D +L LGL + F+ +++ E
Sbjct: 119 R-TRGLRLAVISNFD-RRLEGILGGLGLREHFDFVLTSEAAG------------------ 158
Query: 169 PTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LE 227
KP F++ ++A++ P D+ +
Sbjct: 159 -------------------------WPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQ 193
Query: 228 TGKRLGLHTVWVGTSHRAE-GVDYALESIHNIKEALPELWEV 268
+ +G+H+ V + V ++ H + L L
Sbjct: 194 GPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS-LAHLLPA 234
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 45/153 (29%)
Query: 114 IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173
I I +N + + L F+ II
Sbjct: 120 ITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDT------------------------ 155
Query: 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRK-TIFFDDSIRNLETGKRL 232
KP E NI P K F DSI ++++
Sbjct: 156 -------------------GTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEA 196
Query: 233 GLHTVWVGTSHRAEGVDYALESIHNIKEALPEL 265
G + G+++ + + + ++ ++I+ + +L
Sbjct: 197 GCLPIKYGSTNIIKDI-LSFKNFYDIRNFICQL 228
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 4e-04
Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 55/207 (26%)
Query: 74 LRAIGYQFDCDDFHSYVHGRL-PYMMLKPDPVLRNLLLSLPIRKV---IFTNADKTHAA- 128
+ +G + Y H L Y + + L + I +N +
Sbjct: 7 IWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEV 66
Query: 129 --RVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADL 186
RVL+ G+ D F+ I + S + ++
Sbjct: 67 IKRVLTNFGIIDYFDFIYA--------------------SNSELQPGKME---------- 96
Query: 187 ELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKRLGLHTVWV------ 239
KP + F+ I+ + + ++ + + R G+H +W+
Sbjct: 97 ---------KPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVC 147
Query: 240 -GTSHRAEGVDYALESIHNIKEALPEL 265
+ + ++ + +PE
Sbjct: 148 LQDERLPLVAPPFVIPVWDLAD-VPEA 173
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* Length = 306 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 8e-04
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 22/94 (23%)
Query: 190 RTPVVC-KPFEEAFEQVFKIANINPRKTIFFDDSIRNLET----GKRLGLHTVWVGT-SH 243
R +V KP FE + + +I+P +T+ D LET G R G+ TV T
Sbjct: 208 RQALVVGKPSPYMFECITENFSIDPARTLMVGD---RLETDILFGHRCGMTTVLTLTGVS 264
Query: 244 RAEGV-------------DYALESIHNIKEALPE 264
R E Y +ESI ++ E L +
Sbjct: 265 RLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 298
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 290 | |||
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.96 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.95 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.95 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.95 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.95 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.95 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.95 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.95 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.95 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.94 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.94 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.94 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.94 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.94 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.94 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.94 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.94 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.94 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.93 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.93 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.93 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.93 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.93 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.93 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.93 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.93 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.93 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.93 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.93 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.93 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.93 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.93 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.92 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.92 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.92 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.92 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.92 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.92 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.92 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.92 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.92 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.91 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.91 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.91 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.91 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.91 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.9 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.9 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.89 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.89 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.89 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.89 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.88 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.88 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.88 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.87 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.86 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.86 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.85 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.84 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.84 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.84 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.83 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.83 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.83 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.8 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.8 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.8 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.8 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.8 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.79 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.79 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.78 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.78 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.77 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.77 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.77 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.76 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.75 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.75 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.74 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.73 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.73 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.73 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.73 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.72 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.72 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.72 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.72 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.71 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.71 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.7 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.7 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.69 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.69 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.69 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.69 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.67 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.67 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.67 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.66 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.66 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.65 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.65 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.64 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.63 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.62 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.62 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.61 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.61 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.61 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.59 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.57 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.57 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.54 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.54 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.3 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.54 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.53 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.41 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.41 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.39 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.38 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.32 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.29 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.29 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.28 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.27 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.2 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.15 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.09 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.98 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.97 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.92 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.92 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.86 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.76 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.61 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.35 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.23 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.14 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.12 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.12 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.96 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.83 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.79 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.75 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.6 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.5 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.28 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.13 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.11 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.05 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.98 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.67 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.64 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.57 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.52 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 96.33 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.13 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.1 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 95.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 94.7 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 94.34 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 92.15 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 86.02 |
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-28 Score=212.95 Aligned_cols=215 Identities=28% Similarity=0.485 Sum_probs=175.5
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHh
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVH 91 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 91 (290)
..++|+|+||+||||+++...+...+.+++.+++....+++......+...+++.+|.....+.. ....+...+...+.
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~ 132 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVM-FHKVNALEYNRLVD 132 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHH-TTSSCHHHHHHHHT
T ss_pred CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHHHHHHHHh
Confidence 44589999999999999888888888888988888888888777766666677777766655544 34556777777666
Q ss_pred hcCC-CCCCCCChhHHHHHHcCC---C--cEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 92 GRLP-YMMLKPDPVLRNLLLSLP---I--RKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 92 ~~~~-~~~~~~~pg~~~~L~~L~---~--~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
.... ...+.++||+.++|+.|+ + +++++||+........++.+|+..+|+.+++++......
T Consensus 133 ~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~------------ 200 (282)
T 3nuq_A 133 DSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDT------------ 200 (282)
T ss_dssp TTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSS------------
T ss_pred hhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcc------------
Confidence 5432 235788999999999885 7 899999999999999999999999999999887654210
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHhcCC-eEEEecCCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDSIRNLETGKRLGL-HTVWVGTSH 243 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~~Di~~a~~aGi-~~i~v~~~~ 243 (290)
..+||++.+|+.+++++|++| ++|++|||+.+|+.||+.+|+ .++++..+.
T Consensus 201 ---------------------------~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~ 253 (282)
T 3nuq_A 201 ---------------------------LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENE 253 (282)
T ss_dssp ---------------------------CCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCC
T ss_pred ---------------------------cCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCc
Confidence 127999999999999999999 999999999999999999999 566776664
Q ss_pred C------CCCcceeecCHhHHHHHhHHHH
Q 036723 244 R------AEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 244 ~------~~~ad~v~~sl~el~~~l~~~~ 266 (290)
. ...++++++++.||.++|+++|
T Consensus 254 ~~~~~~~~~~ad~vi~sl~el~~~l~~lf 282 (282)
T 3nuq_A 254 VNEILGQTPEGAIVISDILELPHVVSDLF 282 (282)
T ss_dssp C----CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred cccccccCCCCCEEeCCHHHHHHHhhhhC
Confidence 3 3478999999999999988765
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-28 Score=204.72 Aligned_cols=196 Identities=15% Similarity=0.202 Sum_probs=142.2
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCC-CHHHHHHHHh
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQF-DCDDFHSYVH 91 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~ 91 (290)
|++|+|+||+||||+|+...+..++.+ ...++|.+...... +....|............. ....+.+.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKT----IRGFMGPPLESSFATCLSKDQISEAVQIYR 72 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHH----HHHTSSSCHHHHHHTTSCGGGHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHcCccHHHHHHHHcCHHHHHHHHHHHH
Confidence 568999999999999976666655553 34455665432211 1122243332221111111 1122222222
Q ss_pred hc---CCCCCCCCChhHHHHHHcC--CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 92 GR---LPYMMLKPDPVLRNLLLSL--PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 92 ~~---~~~~~~~~~pg~~~~L~~L--~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
+. .......++||+.++|+.| +++++++||+++..+...++++|+..+|+.+++++ +.
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~--------------- 135 (210)
T 2ah5_A 73 SYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PE--------------- 135 (210)
T ss_dssp HHHHHTGGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SS---------------
T ss_pred HHHHHhccCCCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CC---------------
Confidence 11 1113357889999998877 48899999999999999999999999999999887 33
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
+||+|++|+.+++++|++|++|++||||.+|+++|+++|+.++++.++..
T Consensus 136 ----------------------------~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~ 187 (210)
T 2ah5_A 136 ----------------------------APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQ 187 (210)
T ss_dssp ----------------------------CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCH
T ss_pred ----------------------------CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCH
Confidence 79999999999999999999999999999999999999999999987653
Q ss_pred ----CCCcceeecCHhHHHHHh
Q 036723 245 ----AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 ----~~~ad~v~~sl~el~~~l 262 (290)
...++++++++.||.++|
T Consensus 188 ~~l~~~~a~~v~~~~~el~~~l 209 (210)
T 2ah5_A 188 ADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp HHHHTTCCSEEESSTTHHHHHT
T ss_pred HHHHhCCCCEEECCHHHHHHHh
Confidence 246899999999998754
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-27 Score=200.61 Aligned_cols=204 Identities=23% Similarity=0.312 Sum_probs=152.8
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHH-----HHHHHHHHH--c-ccH---------HH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPE-----LCVSLYKFY--G-TTL---------AG 73 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~-----~~~~~~~~~--g-~~~---------~~ 73 (290)
+||++|+|+||+||||+++...+..++.+ ...++|.+...... .....+..+ + ... ..
T Consensus 3 ~mm~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (238)
T 3ed5_A 3 AMKRYRTLLFDVDDTILDFQAAEALALRL-----LFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSAL 77 (238)
T ss_dssp -CCCCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred ccccCCEEEEcCcCcCcCCchhHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 46779999999999999966666655553 44556776543211 111111111 0 000 11
Q ss_pred HHHcCCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCC
Q 036723 74 LRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNS 151 (290)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~ 151 (290)
+...+...+...+...+.+... ....++|++.++|+.|+ ++++++||+........++.+|+..+|+.+++++..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~ 156 (238)
T 3ed5_A 78 LKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGF 156 (238)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTS
T ss_pred HHHcCCCCcHHHHHHHHHHHHH-hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCC
Confidence 2233444444555555544332 34688999999998886 78999999999999999999999999999999988775
Q ss_pred CCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC-CCCCcEEEEcCCc-cchHHH
Q 036723 152 TDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN-INPRKTIFFDDSI-RNLETG 229 (290)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~-~~~~e~i~iGDs~-~Di~~a 229 (290)
+||++.+++.+++++| ++|++|++|||+. +|+++|
T Consensus 157 -------------------------------------------~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a 193 (238)
T 3ed5_A 157 -------------------------------------------QKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGG 193 (238)
T ss_dssp -------------------------------------------CTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHH
T ss_pred -------------------------------------------CCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHH
Confidence 7999999999999999 9999999999998 999999
Q ss_pred HhcCCeEEEecCCCC----CCCcceeecCHhHHHHHhH
Q 036723 230 KRLGLHTVWVGTSHR----AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 230 ~~aGi~~i~v~~~~~----~~~ad~v~~sl~el~~~l~ 263 (290)
+.+|+.+++++++.. ...|+++++++.||.++|.
T Consensus 194 ~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 194 QLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILN 231 (238)
T ss_dssp HHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHT
T ss_pred HHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHH
Confidence 999999999988643 4579999999999998764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-28 Score=205.18 Aligned_cols=197 Identities=21% Similarity=0.294 Sum_probs=145.1
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-----HHHHcCCCCCHHHHHHH
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-----GLRAIGYQFDCDDFHSY 89 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~ 89 (290)
+|+|+||+||||+|+...+..++. .++..+|.+.... ......|.... ...........+.+...
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~-----~~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYR-----RVAESYGKPYTED-----LHRRIMGVPEREGLPILMEALEIKDSLENFKKR 70 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHH-----HHHHHTTCCCCHH-----HHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHH-----HHHHHcCCCCCHH-----HHHHHhccchhhhhhhhhhcccchhhHHHHHHH
Confidence 589999999999997777766665 3556677765431 11122232221 11222333333433332
Q ss_pred Hhhc---CCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccc
Q 036723 90 VHGR---LPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 90 ~~~~---~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
+.+. ...+...++||+.++|+.|+ ++++++||+++..+...++.+|+..+|+.++++++++.
T Consensus 71 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~------------ 138 (216)
T 3kbb_A 71 VHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKN------------ 138 (216)
T ss_dssp HHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSS------------
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCC------------
Confidence 2221 11134578899999998884 88999999999999999999999999999999998876
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEE-ecCC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVW-VGTS 242 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~-v~~~ 242 (290)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.+|+ +.++
T Consensus 139 -------------------------------~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g 187 (216)
T 3kbb_A 139 -------------------------------GKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHS 187 (216)
T ss_dssp -------------------------------CTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCS
T ss_pred -------------------------------CcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCC
Confidence 79999999999999999999999999999999999999999986 6665
Q ss_pred CC------CCCcceeecCHhHHHHHhHHH
Q 036723 243 HR------AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 243 ~~------~~~ad~v~~sl~el~~~l~~~ 265 (290)
.. ..+++. +.+++++.+.|.+|
T Consensus 188 ~~~~~~l~~~~~~~-i~~~~eli~~l~eL 215 (216)
T 3kbb_A 188 LNDGKALLEAGAVA-LVKPEEILNVLKEV 215 (216)
T ss_dssp SSCCHHHHHTTCSE-EECGGGHHHHHHHH
T ss_pred CCCHHHHHhCCCcE-ECCHHHHHHHHHHH
Confidence 43 223444 45788998888876
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-28 Score=210.21 Aligned_cols=200 Identities=20% Similarity=0.261 Sum_probs=141.8
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccH--HH--------HHHHHHHHHcccHHHHHHcCCCC
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKV--PE--------LCVSLYKFYGTTLAGLRAIGYQF 81 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~--~~--------~~~~~~~~~g~~~~~~~~~~~~~ 81 (290)
+.|+|+|+||+||||+|+...+..++. .++.++|++.... .. ....+...... ....
T Consensus 23 ~~MIKaViFDlDGTLvDs~~~~~~a~~-----~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~ 89 (250)
T 4gib_A 23 NAMIEAFIFDLDGVITDTAYYHYMAWR-----KLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNK--------KYSF 89 (250)
T ss_dssp -CCCCEEEECTBTTTBCCHHHHHHHHH-----HHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTC--------TTTS
T ss_pred cchhheeeecCCCcccCCHHHHHHHHH-----HHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcC--------CCCC
Confidence 445999999999999996555555554 2556667654321 00 00111111110 1111
Q ss_pred CHHH-------HHHHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccC
Q 036723 82 DCDD-------FHSYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLN 150 (290)
Q Consensus 82 ~~~~-------~~~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~ 150 (290)
.... +...+..... .....++||+.++++.|+ +++++.|+. ......++++|+..+|+.++++++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~~Fd~i~~~~~~~ 167 (250)
T 4gib_A 90 SEEEKVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISDKFDFIADAGKCK 167 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGGGCSEECCGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccccccceeecccccC
Confidence 1111 1111211111 134567899999999886 455555444 34566899999999999999999887
Q ss_pred CCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 151 STDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
. +||+|++|+.+++++|++|++|++|||+.+|+++|+
T Consensus 168 ~-------------------------------------------~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~ 204 (250)
T 4gib_A 168 N-------------------------------------------NKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAIN 204 (250)
T ss_dssp S-------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHH
T ss_pred C-------------------------------------------CCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHH
Confidence 5 799999999999999999999999999999999999
Q ss_pred hcCCeEEEecCCCCCCCcceeecCHhHH-HHHhHHHHHhh
Q 036723 231 RLGLHTVWVGTSHRAEGVDYALESIHNI-KEALPELWEVA 269 (290)
Q Consensus 231 ~aGi~~i~v~~~~~~~~ad~v~~sl~el-~~~l~~~~~~~ 269 (290)
++|+.+|++++.+...+||++++++.|| .+.|.+.|...
T Consensus 205 ~aG~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~~~n~~ 244 (250)
T 4gib_A 205 SANMFSVGVGNYENLKKANLVVDSTNQLKFEYIQEKYNEY 244 (250)
T ss_dssp HTTCEEEEESCTTTTTTSSEEESSGGGCCHHHHHHHHHHH
T ss_pred HcCCEEEEECChhHhccCCEEECChHhCCHHHHHHHHHHH
Confidence 9999999998888888899999999999 57787777653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-27 Score=200.56 Aligned_cols=205 Identities=15% Similarity=0.251 Sum_probs=151.3
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-----HH-HHcCCCCCHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-----GL-RAIGYQFDCDD 85 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-----~~-~~~~~~~~~~~ 85 (290)
+|++|+|+||+||||+++...+..++.+ ....+|.+..... .....|.... .+ ...+...+.+.
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 89 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPNHAESWHK-----IMKRFGFGLSREE-----AYMHEGRTGASTINIVSRRERGHDATEEE 89 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCCCHHH
T ss_pred CCCCCEEEECCCCccCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCChHHHHHHHHHHhcCCCCCHHH
Confidence 4569999999999999977666666653 3444566644321 1112222211 01 11233334444
Q ss_pred HHHHHhh---cC-CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc--eeEEeecccCCCCCCc
Q 036723 86 FHSYVHG---RL-PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF--ERIISFETLNSTDKGT 156 (290)
Q Consensus 86 ~~~~~~~---~~-~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~ 156 (290)
+...+.. .. ......++||+.++|+.|+ ++++++||+........++. ++..+| +.+++++.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~----- 163 (247)
T 3dv9_A 90 IKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY----- 163 (247)
T ss_dssp HHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS-----
T ss_pred HHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC-----
Confidence 3332211 11 1234688999999998885 78999999999888888988 999999 88999887765
Q ss_pred cccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE
Q 036723 157 VLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+||+|.+|+.+++++|++|++|++|||+.+|++||+.+|+.+
T Consensus 164 --------------------------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~ 205 (247)
T 3dv9_A 164 --------------------------------------GKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFT 205 (247)
T ss_dssp --------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEE
T ss_pred --------------------------------------CCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeE
Confidence 799999999999999999999999999999999999999999
Q ss_pred EEecCCCC------CCCcceeecCHhHHHHHhHHHHHhhC
Q 036723 237 VWVGTSHR------AEGVDYALESIHNIKEALPELWEVAG 270 (290)
Q Consensus 237 i~v~~~~~------~~~ad~v~~sl~el~~~l~~~~~~~~ 270 (290)
+++.++.. ...|+++++++.||.++|.++.+..+
T Consensus 206 i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~~~ 245 (247)
T 3dv9_A 206 IAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQSALK 245 (247)
T ss_dssp EEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHHHHHC
T ss_pred EEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHHHHhc
Confidence 99988764 34799999999999999999887653
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.9e-28 Score=208.01 Aligned_cols=199 Identities=19% Similarity=0.225 Sum_probs=136.8
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccH--H--------HHHHHHHHHHcccHHHHHHcCCC
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKV--P--------ELCVSLYKFYGTTLAGLRAIGYQ 80 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~--~--------~~~~~~~~~~g~~~~~~~~~~~~ 80 (290)
|+|++|+|+||+||||+|+...+..++.+ ++.++|++.... . .....+....+... .
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~ 67 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQ-----IAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEG--------D 67 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGG--------G
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhccc--------c
Confidence 56789999999999999966555555552 455566653321 0 11111211111110 0
Q ss_pred CCHHHHH-------HHHhhcC-CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeeccc
Q 036723 81 FDCDDFH-------SYVHGRL-PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETL 149 (290)
Q Consensus 81 ~~~~~~~-------~~~~~~~-~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~ 149 (290)
....... ..+...+ ......++||+.++++.|+ ++++++||... ...+++++|+..+|+.+++++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~ 145 (243)
T 4g9b_A 68 FNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQL 145 (243)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccc
Confidence 1111110 0111111 1133467899999998885 77888888654 46679999999999999999988
Q ss_pred CCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 036723 150 NSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETG 229 (290)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a 229 (290)
+. +||+|++|+.+++++|++|++|++|||+.+|+++|
T Consensus 146 ~~-------------------------------------------~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA 182 (243)
T 4g9b_A 146 KN-------------------------------------------SKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI 182 (243)
T ss_dssp SS-------------------------------------------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHH
T ss_pred cC-------------------------------------------CCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHH
Confidence 76 79999999999999999999999999999999999
Q ss_pred HhcCCeEEEecCCCCCCCcceeecCHhHH-HHHhHHHHHhh
Q 036723 230 KRLGLHTVWVGTSHRAEGVDYALESIHNI-KEALPELWEVA 269 (290)
Q Consensus 230 ~~aGi~~i~v~~~~~~~~ad~v~~sl~el-~~~l~~~~~~~ 269 (290)
+++|+.+|+|.++. .+++.++++..++ .+-|.++|+..
T Consensus 183 ~~aG~~~I~V~~g~--~~ad~~~~~~~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 183 NASGMRSVGIGAGL--TGAQLLLPSTESLTWPRLSAFWQNV 221 (243)
T ss_dssp HHHTCEEEEESTTC--CSCSEEESSGGGCCHHHHHHHHHHH
T ss_pred HHcCCEEEEECCCC--CcHHHhcCChhhcCHHHHHHHHHHH
Confidence 99999999999886 4466666666554 23455555544
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-27 Score=200.81 Aligned_cols=200 Identities=16% Similarity=0.208 Sum_probs=149.2
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHH-HHHHHHHHHHHcCCCcccHH-----HHHHHHHHHHcccHHHHHHcCCCCCHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEV-TKNIQEYMLQKLCIEEAKVP-----ELCVSLYKFYGTTLAGLRAIGYQFDCD 84 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~-~~~i~~~~~~~~g~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~ 84 (290)
+|+++|+|+||+||||+++...+...+ .+ .....|.+..... .....+....+...... ..
T Consensus 21 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~ 87 (231)
T 3kzx_A 21 SMKQPTAVIFDWYNTLIDTSINIDRTTFYQ-----VLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKEA--------TI 87 (231)
T ss_dssp CCCCCSEEEECTBTTTEETTSSCCHHHHHH-----HHHHTTCCCCCCTTSCTTTHHHHHHHHHGGGHHHH--------HH
T ss_pred ccCCCCEEEECCCCCCcCCchhHHHHHHHH-----HHHHcCCCHHHHHHHhCccHHHHHHHHhCchHHHH--------HH
Confidence 456799999999999999887777777 64 3444555432211 11111111112111110 12
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccc
Q 036723 85 DFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQ 161 (290)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 161 (290)
.+.+.+..........+.|++.++|+.|+ ++++++||+....+...++.+|+..+|+.++++++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~---------- 157 (231)
T 3kzx_A 88 LYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGT---------- 157 (231)
T ss_dssp HHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSC----------
T ss_pred HHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCC----------
Confidence 23333331233356788999999999885 78999999999999999999999999999999987765
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCC-cEEEEcCCccchHHHHhcCCeEEEec
Q 036723 162 DASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPR-KTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~-e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||++++|+.+++++|++|+ ++++|||+.+|+++|+.+|+.+|+++
T Consensus 158 ---------------------------------~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~ 204 (231)
T 3kzx_A 158 ---------------------------------IKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG 204 (231)
T ss_dssp ---------------------------------CTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred ---------------------------------CCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 79999999999999999999 99999999999999999999999997
Q ss_pred CCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 241 TSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 241 ~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
++.. ..++++++++.||.++|.++++
T Consensus 205 ~~~~-~~~~~~~~~~~el~~~l~~~l~ 230 (231)
T 3kzx_A 205 STNI-IKDILSFKNFYDIRNFICQLIN 230 (231)
T ss_dssp C------CCEEESSHHHHHHHHHHHHC
T ss_pred CCCC-CCCceeeCCHHHHHHHHHHHhc
Confidence 7654 5789999999999999988763
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=198.29 Aligned_cols=199 Identities=23% Similarity=0.328 Sum_probs=147.4
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHH-------H
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDD-------F 86 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~ 86 (290)
++|+|+||+||||+++...+..++.+ ...+.|.+...... +....|.............+... +
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKY-----SLNKFDIQVEDLSS----LNKFVGPPLKTSFMEYYNFDEETATVAIDYY 73 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHH-----HHHTTTCCCSCGGG----GGGGSSSCHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhCCCHHHHHHHHHHH
Confidence 48999999999999976666666663 44455665432111 11111222111111001112211 2
Q ss_pred HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccc
Q 036723 87 HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 87 ~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
...+.+. ......++||+.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++....
T Consensus 74 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------ 140 (226)
T 3mc1_A 74 RDYFKAK-GMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGK------------ 140 (226)
T ss_dssp HHHHTTT-GGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSS------------
T ss_pred HHHHHHh-CcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCC------------
Confidence 2222221 1234688999999999986 78999999999999999999999999999999987765
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||++.+++.+++++|++|++|++|||+.+|++||+.+|+.++++.++.
T Consensus 141 -------------------------------~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~ 189 (226)
T 3mc1_A 141 -------------------------------LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGF 189 (226)
T ss_dssp -------------------------------SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSS
T ss_pred -------------------------------CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCC
Confidence 7999999999999999999999999999999999999999999998775
Q ss_pred C------CCCcceeecCHhHHHHHhHHH
Q 036723 244 R------AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 244 ~------~~~ad~v~~sl~el~~~l~~~ 265 (290)
. +..|+++++++.||.+++.+.
T Consensus 190 ~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 190 GSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp SCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred CCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 3 367999999999999877653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=203.93 Aligned_cols=201 Identities=17% Similarity=0.286 Sum_probs=149.2
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-----HH-HHcCCCCCHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-----GL-RAIGYQFDCD 84 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-----~~-~~~~~~~~~~ 84 (290)
+||++|+|+||+||||+++...+..++.+ ....+|+...... .....|.... .+ ...+...+.+
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQ-----VMKTHGLDLSREE-----AYMHEGRTGASTINIVFQRELGKEATQE 89 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCCCHH
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCHHH-----HHHHhCCCHHHHHHHHHHHHhCCCCCHH
Confidence 46679999999999999977666666653 3444576644321 1111222111 11 1123333444
Q ss_pred HHHHHHhh---c-CCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc--eeEEeecccCCCCCC
Q 036723 85 DFHSYVHG---R-LPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF--ERIISFETLNSTDKG 155 (290)
Q Consensus 85 ~~~~~~~~---~-~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~ 155 (290)
.+...+.. . .......++|++.++|+.|+ ++++++||+........+.. ++..+| +.+++++.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~---- 164 (243)
T 3qxg_A 90 EIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY---- 164 (243)
T ss_dssp HHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS----
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC----
Confidence 33322211 1 11245678999999998885 78999999999888888888 999999 88999887765
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
+||+|.+|+.+++++|++|++|++|||+.+|++||+.+|+.
T Consensus 165 ---------------------------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 205 (243)
T 3qxg_A 165 ---------------------------------------GKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIF 205 (243)
T ss_dssp ---------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCE
T ss_pred ---------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCE
Confidence 79999999999999999999999999999999999999999
Q ss_pred EEEecCCCC------CCCcceeecCHhHHHHHhHHH
Q 036723 236 TVWVGTSHR------AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 236 ~i~v~~~~~------~~~ad~v~~sl~el~~~l~~~ 265 (290)
++++.++.. ...|+++++++.||.++|.++
T Consensus 206 ~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 206 TIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTI 241 (243)
T ss_dssp EEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhh
Confidence 999988764 236999999999999988875
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-27 Score=197.74 Aligned_cols=197 Identities=14% Similarity=0.204 Sum_probs=145.3
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH----HH-HHcCCCCCHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA----GL-RAIGYQFDCDDFH 87 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~----~~-~~~~~~~~~~~~~ 87 (290)
||+|+|+||+||||+++...+..++.+ ....+|.+.... .+....|.... .+ ...+.......+.
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRAS-----FLGQKGISIDHL-----PPSFFIGGNTKQVWENILRDEYDKWDVSTLQ 72 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCTTS-----CHHHHTTSCGGGCHHHHHGGGGGGSCHHHHH
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHcCCCHHHHHHHHHHhhcCCCCHHHHH
Confidence 458999999999999977666666553 344456543221 11111222211 11 1122223333333
Q ss_pred HH----HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 88 SY----VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 88 ~~----~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
.. +.+........++|++.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------- 143 (214)
T 3e58_A 73 EEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKE--------- 143 (214)
T ss_dssp HHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSS---------
T ss_pred HHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccC---------
Confidence 32 222222223478899999998885 78999999999999999999999999999999987765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.
T Consensus 144 ----------------------------------~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 189 (214)
T 3e58_A 144 ----------------------------------SKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIR 189 (214)
T ss_dssp ----------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred ----------------------------------CCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEEC
Confidence 7999999999999999999999999999999999999999999998
Q ss_pred CCC---CCCCcceeecCHhHHHHHh
Q 036723 241 TSH---RAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 241 ~~~---~~~~ad~v~~sl~el~~~l 262 (290)
++. ....++++++++.||.++|
T Consensus 190 ~~~~~~~~~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 190 DNEFGMDQSAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp CSSSCCCCTTSSEEESSGGGGGGGC
T ss_pred CCCccchhccHHHHHHHHHHHHhhC
Confidence 753 2467999999999998753
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=198.15 Aligned_cols=195 Identities=17% Similarity=0.300 Sum_probs=142.5
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCC-cccHHHHHHHHHHHHcccHHHHH----------------H
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIE-EAKVPELCVSLYKFYGTTLAGLR----------------A 76 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~~----------------~ 76 (290)
++|+|+||+||||+|+...+..++.+ ....+|.+ ...... +....|....... .
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 73 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNY-----AFEQTGHRHDFTVED----IKNFFGSGVVVAVTRALAYEAGSSRESLVA 73 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTSCCCCCHHH----HHHHCSSCHHHHHHHHHHHHTTCCHHHHTT
T ss_pred cccEEEEecCCCCccCHHHHHHHHHH-----HHHHcCCCCCCCHHH----HHHhcCccHHHHHHHHHHhccccccccccc
Confidence 58999999999999977666666663 44455765 222211 1111222111000 0
Q ss_pred c-------CCCCCHHH-------HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCc
Q 036723 77 I-------GYQFDCDD-------FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDC 139 (290)
Q Consensus 77 ~-------~~~~~~~~-------~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~ 139 (290)
. +...+.+. +.+.+.... .....++||+.++|+.|+ ++++++||++...+...++++|+. +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~ 151 (240)
T 2hi0_A 74 FGTKDEQIPEAVTQTEVNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S 151 (240)
T ss_dssp TTSTTCCCCTTCCHHHHHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c
Confidence 0 11122222 122222222 245678999999999885 789999999999999999999998 9
Q ss_pred ceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 036723 140 FERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFF 219 (290)
Q Consensus 140 f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~i 219 (290)
|+.+++++.+.. +||+|++|+.+++++|++|++|++|
T Consensus 152 f~~~~~~~~~~~-------------------------------------------~Kp~p~~~~~~~~~l~~~~~~~~~v 188 (240)
T 2hi0_A 152 FDFALGEKSGIR-------------------------------------------RKPAPDMTSECVKVLGVPRDKCVYI 188 (240)
T ss_dssp CSEEEEECTTSC-------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred eeEEEecCCCCC-------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEE
Confidence 999999887654 7999999999999999999999999
Q ss_pred cCCccchHHHHhcCCeEEEecCCCC------CCCcceeecCHhHHHHHh
Q 036723 220 DDSIRNLETGKRLGLHTVWVGTSHR------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 220 GDs~~Di~~a~~aGi~~i~v~~~~~------~~~ad~v~~sl~el~~~l 262 (290)
||+.+|+++|+++|+.++++.++.. ...+++++.++.|+.++|
T Consensus 189 GDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 189 GDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp ESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence 9999999999999999999987653 236899999999998765
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.1e-27 Score=199.94 Aligned_cols=203 Identities=16% Similarity=0.194 Sum_probs=146.1
Q ss_pred cccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH--cCCCCCHH--
Q 036723 9 QVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA--IGYQFDCD-- 84 (290)
Q Consensus 9 ~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~-- 84 (290)
....+++|+|+||+||||+++...+...+.+ ....+|. .... ..+....|........ .+......
T Consensus 13 ~~~~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~-~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (237)
T 4ex6_A 13 GAPAAADRGVILDLDGTLADTPAAIATITAE-----VLAAMGT-AVSR----GAILSTVGRPLPASLAGLLGVPVEDPRV 82 (237)
T ss_dssp ----CCCEEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTC-CCCH----HHHHHHTTSCHHHHHHHHHTSCTTSHHH
T ss_pred CCCcccCCEEEEcCCCCCcCCHHHHHHHHHH-----HHHHcCC-CCCH----HHHHHhcCccHHHHHHHHhCCCCCHHHH
Confidence 3456779999999999999977666666663 3444452 2221 1122222333222111 11111111
Q ss_pred -H----HHHHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 85 -D----FHSYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 85 -~----~~~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
. +.+.+.+... .....++||+.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---- 158 (237)
T 4ex6_A 83 AEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVER---- 158 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSS----
T ss_pred HHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCC----
Confidence 1 1112221111 034578899999999885 78999999999999999999999999999999987765
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
+||++++|+.+++++|++|++|++|||+.+|++||+.+|+.
T Consensus 159 ---------------------------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 199 (237)
T 4ex6_A 159 ---------------------------------------GKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMT 199 (237)
T ss_dssp ---------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred ---------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 79999999999999999999999999999999999999999
Q ss_pred EEEecCCCC------CCCcceeecCHhHHHHHhHH
Q 036723 236 TVWVGTSHR------AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 236 ~i~v~~~~~------~~~ad~v~~sl~el~~~l~~ 264 (290)
++++.++.. ...|++++.++.||.++|..
T Consensus 200 ~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 200 VIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD 234 (237)
T ss_dssp EEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence 999988753 24799999999999987754
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-26 Score=198.90 Aligned_cols=211 Identities=17% Similarity=0.284 Sum_probs=150.2
Q ss_pred cccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH-c-------ccHHHH------
Q 036723 9 QVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY-G-------TTLAGL------ 74 (290)
Q Consensus 9 ~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~-g-------~~~~~~------ 74 (290)
...++++|+|+||+||||+|+...+..++.+.++. +...+|.+. ............. + .+...+
T Consensus 12 ~~~~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (260)
T 2gfh_A 12 HMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKE-EAEIICDKVQVKLSKECFHPYSTCITDVRTSHWE 89 (260)
T ss_dssp CEECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCT-HHHHHHHHHHHHHHTCCCC----CHHHHHHHHHH
T ss_pred hcccccceEEEEcCCCCCCCCHHHHHHHHHHHHHH-HHHhcCCcH-HHHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Confidence 34566799999999999999666666666655544 344566654 2222222211111 1 111110
Q ss_pred ---HHc-CCCCCHH---HHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEe
Q 036723 75 ---RAI-GYQFDCD---DFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 75 ---~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~ 145 (290)
... +...... .+.+.+.... ...+.++||+.++|+.|+ ++++|+||++...+...++++|+..+|+.+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~ 168 (260)
T 2gfh_A 90 EAIQETKGGADNRKLAEECYFLWKSTR-LQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVI 168 (260)
T ss_dssp HHHHHHHCSSCCHHHHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHH-HhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEe
Confidence 000 1111111 1122221111 134688999999999886 78999999999999999999999999999999
Q ss_pred ecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCC-cc
Q 036723 146 FETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDS-IR 224 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs-~~ 224 (290)
+++.+. +||+|++|+.+++++|++|++|++|||+ .+
T Consensus 169 ~~~~~~-------------------------------------------~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~ 205 (260)
T 2gfh_A 169 GGEQKE-------------------------------------------EKPAPSIFYHCCDLLGVQPGDCVMVGDTLET 205 (260)
T ss_dssp GGGSSS-------------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTT
T ss_pred cCCCCC-------------------------------------------CCCCHHHHHHHHHHcCCChhhEEEECCCchh
Confidence 887765 7999999999999999999999999996 89
Q ss_pred chHHHHhcCC-eEEEecCCCC-----CCCcceeecCHhHHHHHhHHH
Q 036723 225 NLETGKRLGL-HTVWVGTSHR-----AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 225 Di~~a~~aGi-~~i~v~~~~~-----~~~ad~v~~sl~el~~~l~~~ 265 (290)
|+.+|+++|+ .++++.++.. ...|+++++++.||.+++.++
T Consensus 206 Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~ 252 (260)
T 2gfh_A 206 DIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI 252 (260)
T ss_dssp HHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHH
T ss_pred hHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHHHH
Confidence 9999999999 7999976532 346899999999999887664
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=195.37 Aligned_cols=200 Identities=17% Similarity=0.107 Sum_probs=145.8
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDDF 86 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~ 86 (290)
|+++|+|+||+||||+++...+..++.+ ...+.|++.... .+....|...... ...+...+...+
T Consensus 3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 72 (233)
T 3s6j_A 3 LRPQTSFIFDLDGTLTDSVYQNVAAWKE-----ALDAENIPLAMW-----RIHRKIGMSGGLMLKSLSRETGMSITDEQA 72 (233)
T ss_dssp --CCCEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHHTTSCHHHHHHHHHHC----CCHHHH
T ss_pred CCcCcEEEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHcCCcHHHHHHHHHHhcCCCCCHHHH
Confidence 3468999999999999975555555553 445567664432 1222233332211 112222233322
Q ss_pred HHH---HhhcC--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccc
Q 036723 87 HSY---VHGRL--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVL 158 (290)
Q Consensus 87 ~~~---~~~~~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 158 (290)
... +.+.. ......++|++.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------- 145 (233)
T 3s6j_A 73 ERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSY------- 145 (233)
T ss_dssp HHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSC-------
T ss_pred HHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCC-------
Confidence 221 11110 1134678999999998885 78999999999999999999999999999999987765
Q ss_pred cccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 159 VDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
+||++.+|+.+++++|++|++|++|||+.+|++||+.+|+.+++
T Consensus 146 ------------------------------------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~ 189 (233)
T 3s6j_A 146 ------------------------------------GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVG 189 (233)
T ss_dssp ------------------------------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred ------------------------------------CCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEE
Confidence 79999999999999999999999999999999999999999999
Q ss_pred ecCCCC------CCCcceeecCHhHHHHHhHH
Q 036723 239 VGTSHR------AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 239 v~~~~~------~~~ad~v~~sl~el~~~l~~ 264 (290)
+.++.. ..+|+++++++.||.++|.+
T Consensus 190 v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~ 221 (233)
T 3s6j_A 190 LLSGGYDIGELERAGALRVYEDPLDLLNHLDE 221 (233)
T ss_dssp EGGGSCCHHHHHHTTCSEEESSHHHHHHTGGG
T ss_pred EeCCCCchHhHHhcCCCEEECCHHHHHHHHHH
Confidence 987643 34599999999999887643
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=199.47 Aligned_cols=203 Identities=21% Similarity=0.296 Sum_probs=144.9
Q ss_pred ccccccCC--CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCH
Q 036723 6 ENKQVSNQ--KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDC 83 (290)
Q Consensus 6 ~~~~~~~~--~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 83 (290)
++++..+| ++|+|+||+||||+++...+..++.. .....|.+... . .+....|..........+..+.
T Consensus 18 ~~~~~~~M~~mik~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~ 87 (240)
T 3sd7_A 18 LYFQSNAMKKNYEIVLFDLDGTLTDPKEGITKSIQY-----SLNSFGIKEDL-E----NLDQFIGPPLHDTFKEYYKFED 87 (240)
T ss_dssp --------CCCCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCG-G----GGGGGSSSCHHHHHHHTSCCCH
T ss_pred chhhhhHHHHhccEEEEecCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHHhCccHHHHHHHHhCCCH
Confidence 44444334 57999999999999976666666653 44456665221 1 1111112222211111112222
Q ss_pred HH-------HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCC
Q 036723 84 DD-------FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTD 153 (290)
Q Consensus 84 ~~-------~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~ 153 (290)
.. +.+.+.+. ......++|++.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-- 164 (240)
T 3sd7_A 88 KKAKEAVEKYREYFADK-GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGT-- 164 (240)
T ss_dssp HHHHHHHHHHHHHHHHT-GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSC--
T ss_pred HHHHHHHHHHHHHHHHh-cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCC--
Confidence 22 22222221 1234678999999998885 78999999999999999999999999999999987765
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhc
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~a 232 (290)
+||++.+++.+++++|++ +++|++|||+.+|+++|+.+
T Consensus 165 -----------------------------------------~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~a 203 (240)
T 3sd7_A 165 -----------------------------------------RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKI 203 (240)
T ss_dssp -----------------------------------------CCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHH
T ss_pred -----------------------------------------CCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHC
Confidence 799999999999999999 99999999999999999999
Q ss_pred CCeEEEecCCCC------CCCcceeecCHhHHHHHh
Q 036723 233 GLHTVWVGTSHR------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 233 Gi~~i~v~~~~~------~~~ad~v~~sl~el~~~l 262 (290)
|+.++++.++.. ...|+++++++.||.++|
T Consensus 204 G~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 204 GIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp TCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999999987654 257999999999998865
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-26 Score=198.95 Aligned_cols=199 Identities=17% Similarity=0.186 Sum_probs=149.1
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHH--
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCD-- 84 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~-- 84 (290)
+|++|+|+||+||||+++...+...+.+ ....+|.+..... .+....|...... ...+......
T Consensus 25 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 95 (259)
T 4eek_A 25 DAPFDAVLFDLDGVLVESEGIIAQVWQS-----VLAERGLHLDLTE----IAMYFTGQRFDGVLAYLAQQHDFVPPPDFL 95 (259)
T ss_dssp CCCCSEEEEESBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHH----HHHHTTTCCHHHHHHHHHHHHCCCCCTTHH
T ss_pred hcCCCEEEECCCCCcccCHHHHHHHHHH-----HHHHhCCCCCHHH----HHHHHhCCCHHHHHHHHHHHcCCCCCHHHH
Confidence 4579999999999999976666665553 4444566543211 1111122222211 1123222222
Q ss_pred -HHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee-EEeecccC-CCCCCccc
Q 036723 85 -DFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER-IISFETLN-STDKGTVL 158 (290)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~-~~~~~~~~ 158 (290)
.+.+.+.+.. ....++|++.++|+.|+ ++++++||+....+...++.+|+..+|+. +++++..+ .
T Consensus 96 ~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~------- 166 (259)
T 4eek_A 96 DVLETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGR------- 166 (259)
T ss_dssp HHHHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTC-------
T ss_pred HHHHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcC-------
Confidence 2223333322 55788999999999885 88999999999999999999999999999 99888776 5
Q ss_pred cccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 159 VDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
+||++.+|+.+++++|++|++|++|||+.+|+++|+.+|+.+++
T Consensus 167 ------------------------------------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~ 210 (259)
T 4eek_A 167 ------------------------------------GKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWG 210 (259)
T ss_dssp ------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred ------------------------------------CCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEE
Confidence 79999999999999999999999999999999999999999999
Q ss_pred ecCCCC----------CCCcceeecCHhHHHHHhHH
Q 036723 239 VGTSHR----------AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 239 v~~~~~----------~~~ad~v~~sl~el~~~l~~ 264 (290)
+.++.. ..+|+++++++.||.++|..
T Consensus 211 v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~ 246 (259)
T 4eek_A 211 LLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAE 246 (259)
T ss_dssp ECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHH
T ss_pred EccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHh
Confidence 987632 24689999999999998865
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=190.69 Aligned_cols=200 Identities=24% Similarity=0.378 Sum_probs=145.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcc--cHHHHHHH-------HHHHHc---ccH---------
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEA--KVPELCVS-------LYKFYG---TTL--------- 71 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~--~~~~~~~~-------~~~~~g---~~~--------- 71 (290)
|++|+|+||+||||+++...+..++.+ ...++|.+.. ....+... .+..+. ...
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEE-----VYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFF 77 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHH-----HHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 569999999999999966555555553 4445565531 11111111 111110 000
Q ss_pred HHHHHcCCCCCHH---HHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEee
Q 036723 72 AGLRAIGYQFDCD---DFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISF 146 (290)
Q Consensus 72 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~ 146 (290)
..+...+.. ... .+...+..... ....++|++.++|+.|+ ++++++||+........++.+|+..+|+.++++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~ 155 (240)
T 3qnm_A 78 YPLQAVGVE-DEALAERFSEDFFAIIP-TKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILS 155 (240)
T ss_dssp HHHHHTTCC-CHHHHHHHHHHHHHHGG-GCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred HHHHHcCCC-cHHHHHHHHHHHHHHhh-hcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEe
Confidence 111122222 111 11222222221 34688999999998886 779999999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cc
Q 036723 147 ETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RN 225 (290)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~D 225 (290)
+..+. +||++.+|+.+++++|++|++|++|||+. +|
T Consensus 156 ~~~~~-------------------------------------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~D 192 (240)
T 3qnm_A 156 EDLGV-------------------------------------------LKPRPEIFHFALSATQSELRESLMIGDSWEAD 192 (240)
T ss_dssp GGTTC-------------------------------------------CTTSHHHHHHHHHHTTCCGGGEEEEESCTTTT
T ss_pred ccCCC-------------------------------------------CCCCHHHHHHHHHHcCCCcccEEEECCCchHh
Confidence 88775 79999999999999999999999999996 99
Q ss_pred hHHHHhcCCeEEEecCCCC---CCCcceeecCHhHHHHHh
Q 036723 226 LETGKRLGLHTVWVGTSHR---AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 226 i~~a~~aGi~~i~v~~~~~---~~~ad~v~~sl~el~~~l 262 (290)
+++|+.+|+.+++++++.. ...|+++++|+.|+.++.
T Consensus 193 i~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 193 ITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp HHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHT
T ss_pred HHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHH
Confidence 9999999999999988763 567999999999999865
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=191.92 Aligned_cols=202 Identities=18% Similarity=0.236 Sum_probs=145.7
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH--------ccc--------H-HHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY--------GTT--------L-AGL 74 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~--------g~~--------~-~~~ 74 (290)
++++|+|+||+||||+++...+..++.+ .....|.+..... +...+.... +.. . ...
T Consensus 3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
T 3smv_A 3 LTDFKALTFDCYGTLIDWETGIVNALQP-----LAKRTGKTFTSDE-LLEVFGRNESPQQTETPGALYQDILRAVYDRIA 76 (240)
T ss_dssp GGGCSEEEECCBTTTBCHHHHHHHHTHH-----HHHHHTCCCCHHH-HHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHH
T ss_pred CccceEEEEeCCCcCcCCchhHHHHHHH-----HHHHhCCCCCHHH-HHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHH
Confidence 3569999999999999966656655553 3334566543221 111111000 000 0 111
Q ss_pred HHcCCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCC
Q 036723 75 RAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNST 152 (290)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~ 152 (290)
...+....... ...+.... ....++|++.++|+.|+ ++++++||++.......++. +..+|+.++++++++.
T Consensus 77 ~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~- 150 (240)
T 3smv_A 77 KEWGLEPDAAE-REEFGTSV--KNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGS- 150 (240)
T ss_dssp HHTTCCCCHHH-HHHHHTGG--GGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTS-
T ss_pred HHhCCCCCHHH-HHHHHHHH--hcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCC-
Confidence 22233333332 22232222 45688999999999886 88999999999998888877 5578999999988775
Q ss_pred CCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHH---HHHcCCCCCcEEEEcCCc-cchHH
Q 036723 153 DKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQV---FKIANINPRKTIFFDDSI-RNLET 228 (290)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~i---l~~~~~~~~e~i~iGDs~-~Di~~ 228 (290)
+||+|..|+.+ ++++|++|++|++|||+. +|+++
T Consensus 151 ------------------------------------------~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~ 188 (240)
T 3smv_A 151 ------------------------------------------YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIP 188 (240)
T ss_dssp ------------------------------------------CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHH
T ss_pred ------------------------------------------CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHH
Confidence 79999999999 899999999999999997 99999
Q ss_pred HHhcCCeEEEecCC-----------C-CCCCcceeecCHhHHHHHhHHHHH
Q 036723 229 GKRLGLHTVWVGTS-----------H-RAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 229 a~~aGi~~i~v~~~-----------~-~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
|+.+|+.+++++++ . ....|+++++++.||.++|.++++
T Consensus 189 a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 189 ANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp HHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHHHHhc
Confidence 99999999998765 1 146799999999999999988764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.1e-26 Score=197.72 Aligned_cols=203 Identities=17% Similarity=0.162 Sum_probs=148.5
Q ss_pred cCCCccEEEEecCCCcccCCCCh-HHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH---------------HH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGL-SKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA---------------GL 74 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~-~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~---------------~~ 74 (290)
+|+++|+|+||+||||+++.... ...+.+ .+...|++.... . +....+.... ..
T Consensus 10 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (277)
T 3iru_A 10 CAGPVEALILDWAGTTIDFGSLAPVYAFME-----LFKQEGIEVTQA-E----AREPMGTEKSEHIRRMLGNSRIANAWL 79 (277)
T ss_dssp CCCCCCEEEEESBTTTBSTTCCHHHHHHHH-----HHHTTTCCCCHH-H----HHTTTTSCHHHHHHHHTTSHHHHHHHH
T ss_pred hhccCcEEEEcCCCCcccCCcccHHHHHHH-----HHHHhCCCCCHH-H----HHHHhcCchHHHHHHhccchHHHHHHH
Confidence 34569999999999999966655 444442 445566653321 1 1111111110 01
Q ss_pred HHcCCCCCHHHHHHH-------HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCc-ceeE
Q 036723 75 RAIGYQFDCDDFHSY-------VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDC-FERI 143 (290)
Q Consensus 75 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~-f~~i 143 (290)
...+...+...+... +.+.. .....++||+.++|+.|+ ++++++||+........++.+++..+ |+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~ 158 (277)
T 3iru_A 80 SIKGQASNEEDIKRLYDLFAPIQTRIV-AQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPAST 158 (277)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHHHHHHH-HHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEE
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHh-hccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceE
Confidence 112333333332221 11111 123678899999998885 78999999999999999999998888 8999
Q ss_pred EeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCC
Q 036723 144 ISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDS 222 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs 222 (290)
++++.... +||++.+|+.+++++|++| ++|++|||+
T Consensus 159 ~~~~~~~~-------------------------------------------~kp~~~~~~~~~~~lgi~~~~~~i~vGD~ 195 (277)
T 3iru_A 159 VFATDVVR-------------------------------------------GRPFPDMALKVALELEVGHVNGCIKVDDT 195 (277)
T ss_dssp ECGGGSSS-------------------------------------------CTTSSHHHHHHHHHHTCSCGGGEEEEESS
T ss_pred ecHHhcCC-------------------------------------------CCCCHHHHHHHHHHcCCCCCccEEEEcCC
Confidence 99887765 7999999999999999999 999999999
Q ss_pred ccchHHHHhcCCeEEEecCCCC-----------------------------CCCcceeecCHhHHHHHhHHHHH
Q 036723 223 IRNLETGKRLGLHTVWVGTSHR-----------------------------AEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 223 ~~Di~~a~~aGi~~i~v~~~~~-----------------------------~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
.+|++||+.+|+.++++.++.. ..+|+++++++.||.++|.++-+
T Consensus 196 ~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 196 LPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp HHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 9999999999999999998842 34699999999999999988655
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-26 Score=191.35 Aligned_cols=195 Identities=16% Similarity=0.213 Sum_probs=143.0
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCCCCCHHHH----H
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGYQFDCDDF----H 87 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~----~ 87 (290)
|++|+|+||+||||+++...+...+.+ ...++|.+... ..+....|.....+ ...+. +...+ .
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-----~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~ 69 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSP-----AQAQKTFPMAAEQAMTELGI--AASEFDHFQA 69 (209)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCH-----HHHHHHTTSCHHHHHHHTTC--CGGGHHHHHH
T ss_pred CcccEEEEcCCCCCcCCHHHHHHHHHH-----HHHHhCCCCCH-----HHHHHHcCCcHHHHHHHcCC--CHHHHHHHHH
Confidence 458999999999999976666655553 34445664322 12222334333222 22222 11222 1
Q ss_pred HHHhhcC-CCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccc
Q 036723 88 SYVHGRL-PYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDAS 164 (290)
Q Consensus 88 ~~~~~~~-~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 164 (290)
+.+.... ......+.|++.++|+.|+ ++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------- 136 (209)
T 2hdo_A 70 QYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK------------- 136 (209)
T ss_dssp HHHHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC-------------
T ss_pred HHHHHHhhhcccCCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCC-------------
Confidence 1111111 1145678999999999987 67899999999999999999999999999999887664
Q ss_pred cCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 165 ESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.||++.+++.+++++|++|++|++|||+.+|+++|+.+|+.+++++++..
T Consensus 137 ------------------------------~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~ 186 (209)
T 2hdo_A 137 ------------------------------RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMD 186 (209)
T ss_dssp ------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCC
T ss_pred ------------------------------CCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCC
Confidence 79999999999999999999999999999999999999999999985532
Q ss_pred ----CCCcceeecCHhHHHHHh
Q 036723 245 ----AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 ----~~~ad~v~~sl~el~~~l 262 (290)
...|++++.++.||.++|
T Consensus 187 ~~~~~~~a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 187 PNADHQKVAHRFQKPLDILELF 208 (209)
T ss_dssp TTGGGSCCSEEESSGGGGGGGC
T ss_pred ChhhhccCCEEeCCHHHHHHhh
Confidence 122899999999987754
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=189.10 Aligned_cols=126 Identities=17% Similarity=0.358 Sum_probs=113.8
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
....++|++.++|+.|+ ++++++||++...+...++.+|+..+|+.+++++..+.
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---------------------- 150 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRL---------------------- 150 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC----------------------
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhccc----------------------
Confidence 55788999999998885 78999999999999999999999999999999987765
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----CCCc
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-----AEGV 248 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-----~~~a 248 (290)
+||++.+++.+++++|++|++|++|||+.+|+++|+.+|+.++++.++.. ...|
T Consensus 151 ---------------------~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~ 209 (230)
T 3um9_A 151 ---------------------FKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVP 209 (230)
T ss_dssp ---------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCC
T ss_pred ---------------------CCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCC
Confidence 79999999999999999999999999999999999999999999987653 3579
Q ss_pred ceeecCHhHHHHHhHHH
Q 036723 249 DYALESIHNIKEALPEL 265 (290)
Q Consensus 249 d~v~~sl~el~~~l~~~ 265 (290)
+++++++.||.++|.++
T Consensus 210 ~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 210 DIVVSDVGVLASRFSPV 226 (230)
T ss_dssp SEEESSHHHHHHTCCC-
T ss_pred cEEeCCHHHHHHHHHHh
Confidence 99999999999887654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=192.95 Aligned_cols=200 Identities=16% Similarity=0.230 Sum_probs=143.2
Q ss_pred ccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccH------------------
Q 036723 10 VSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL------------------ 71 (290)
Q Consensus 10 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~------------------ 71 (290)
...|++|+|+||+||||+++...+...+.+ ...++|.+....... ..+...+....
T Consensus 17 ~~~m~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (254)
T 3umc_A 17 LYFQGMRAILFDVFGTLVDWRSSLIEQFQA-----LERELGGTLPCVELT-DRWRQQYKPAMDRVRNGQAPWQHLDQLHR 90 (254)
T ss_dssp CCSSSCCEEEECCBTTTEEHHHHHHHHHHH-----HHHHSSSCCCHHHHH-HHHHHHTHHHHHHHHTTSSCCCCHHHHHH
T ss_pred ccccCCcEEEEeCCCccEecCccHHHHHHH-----HHHHhcCCCCHHHHH-HHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 345779999999999999966656555553 445556654332111 11111000000
Q ss_pred ----HHHHHcCCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEe
Q 036723 72 ----AGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 72 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~ 145 (290)
..+...+............ .. +....++|++.++|+.|+ ++++++||+........++.+|+. |+.+++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~ 165 (254)
T 3umc_A 91 QSLEALAGEFGLALDEALLQRIT-GF--WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLC 165 (254)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHH-GG--GGSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECC
T ss_pred HHHHHHHHHhCCCCCHHHHHHHH-HH--HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEe
Confidence 0011112222222222111 11 144678899999999887 778999999999999999999986 899998
Q ss_pred ecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 036723 146 FETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN 225 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~D 225 (290)
++.++. +||++.+|+.+++++|++|++|++|||+.+|
T Consensus 166 ~~~~~~-------------------------------------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~D 202 (254)
T 3umc_A 166 ADLFGH-------------------------------------------YKPDPQVYLGACRLLDLPPQEVMLCAAHNYD 202 (254)
T ss_dssp HHHHTC-------------------------------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHH
T ss_pred eccccc-------------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCchHh
Confidence 887765 7999999999999999999999999999999
Q ss_pred hHHHHhcCCeEEEec----CCCC-------CCCcceeecCHhHHHHHhH
Q 036723 226 LETGKRLGLHTVWVG----TSHR-------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 226 i~~a~~aGi~~i~v~----~~~~-------~~~ad~v~~sl~el~~~l~ 263 (290)
++||+.+|+.+++++ ++.. ...|+++++++.||.++|.
T Consensus 203 i~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 203 LKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence 999999999999998 3431 4578999999999998764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-26 Score=196.52 Aligned_cols=198 Identities=21% Similarity=0.289 Sum_probs=144.2
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH-c-CCCCCH----HHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA-I-GYQFDC----DDFH 87 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~~----~~~~ 87 (290)
++|+|+||+||||+++...+..++.+ ....+|.+...... +...+|........ . + .... ..+.
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~ 71 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEK-----TLKELGLEEYYPDN----VTKYIGGGVRALLEKVLK-DKFREEYVEVFR 71 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHH-----HHHHTTCGGGCCSC----GGGGCSSCHHHHHHHHHG-GGCCTHHHHHHH
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhC-hHHHHHHHHHHH
Confidence 58999999999999976666655553 34455654211100 00111221111100 0 0 1111 2223
Q ss_pred HHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccc
Q 036723 88 SYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDAS 164 (290)
Q Consensus 88 ~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 164 (290)
+.+.... .....++||+.++|+.|+ ++++++||+....+...++++|+..+|+.+++++++..
T Consensus 72 ~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~------------- 137 (222)
T 2nyv_A 72 KHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE------------- 137 (222)
T ss_dssp HHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCT-------------
T ss_pred HHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCC-------------
Confidence 3333222 245788999999999885 78999999999999999999999999999999887664
Q ss_pred cCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 165 ESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
+||+|.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++..
T Consensus 138 ------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~ 187 (222)
T 2nyv_A 138 ------------------------------KKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYV 187 (222)
T ss_dssp ------------------------------TCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSC
T ss_pred ------------------------------CCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCC
Confidence 79999999999999999999999999999999999999999999987643
Q ss_pred ---CCCcceeecCHhHHHHHhHHH
Q 036723 245 ---AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 245 ---~~~ad~v~~sl~el~~~l~~~ 265 (290)
...++++++++.+|.+++.+.
T Consensus 188 ~~~~~~~~~~~~~~~el~~~l~~~ 211 (222)
T 2nyv_A 188 KLNSQIPDFTLSRPSDLVKLMDNH 211 (222)
T ss_dssp SCCCCCCSEEESSTTHHHHHHHTT
T ss_pred CccccCCCEEECCHHHHHHHHHHh
Confidence 256899999999999877553
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-26 Score=189.61 Aligned_cols=188 Identities=19% Similarity=0.270 Sum_probs=139.1
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHh
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVH 91 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 91 (290)
+|++|+|+||+||||+++...+.. +....|++..... ...+ . +........ ...+...+.
T Consensus 3 ~~~~k~iifDlDGTL~d~~~~~~~---------~~~~~g~~~~~~~--~~~~-~--~~~~~~~~~------~~~~~~~~~ 62 (205)
T 3m9l_A 3 LSEIKHWVFDMDGTLTIAVHDFAA---------IREALSIPAEDDI--LTHL-A--ALPADESAA------KHAWLLEHE 62 (205)
T ss_dssp GGGCCEEEECTBTTTEEEEECHHH---------HHHHTTCCTTSCH--HHHH-H--HSCHHHHHH------HHHHHHHTH
T ss_pred cccCCEEEEeCCCcCcccHHHHHH---------HHHHhCCCchHHH--HHHH-h--cCChHHHHH------HHHHHHHHH
Confidence 456899999999999996665442 4455676654211 1111 1 111111000 111112221
Q ss_pred hcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc--eeEEeecccCCCCCCccccccccccC
Q 036723 92 GRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF--ERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 92 ~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
+.. .....++|++.++|+.|+ ++++++||+....+...++.+|+..+| +.+++.+. ..
T Consensus 63 ~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~--------------- 125 (205)
T 3m9l_A 63 RDL-AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP--------------- 125 (205)
T ss_dssp HHH-EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC---------------
T ss_pred HHH-hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC---------------
Confidence 111 134578899999998885 789999999999999999999999999 77887664 32
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
+||++.+++.+++++|+++++|++|||+.+|+++|+.+|+.+|++.++..
T Consensus 126 ----------------------------~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~ 177 (205)
T 3m9l_A 126 ----------------------------PKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPW 177 (205)
T ss_dssp ----------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSC
T ss_pred ----------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcc
Confidence 79999999999999999999999999999999999999999999988765
Q ss_pred CCCcceeecCHhHHHHHhHH
Q 036723 245 AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 245 ~~~ad~v~~sl~el~~~l~~ 264 (290)
+..|+++++++.||.+.+..
T Consensus 178 ~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 178 PELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp GGGCSEECSSHHHHHHHHHH
T ss_pred cccCCEEeCCHHHHHHHHHh
Confidence 44599999999999886643
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=190.55 Aligned_cols=200 Identities=17% Similarity=0.223 Sum_probs=142.4
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHH------HHHHH--cc------------cH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVS------LYKFY--GT------------TL 71 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~------~~~~~--g~------------~~ 71 (290)
+|++|+|+||+||||+++...+...+.+ ...++|.+.......... .+..+ +. ..
T Consensus 12 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (254)
T 3umg_A 12 GRNVRAVLFDTFGTVVDWRTGIATAVAD-----YAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENL 86 (254)
T ss_dssp CSBCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred CCCceEEEEeCCCceecCchHHHHHHHH-----HHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 3579999999999999966656555553 444456554332111100 00000 00 00
Q ss_pred -HHHHHcCC---CCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEe
Q 036723 72 -AGLRAIGY---QFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 72 -~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~ 145 (290)
..+...+. ........... .. +....++|++.++|+.|+ ++++++||+........++.+|+. |+.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~ 161 (254)
T 3umg_A 87 DFVLRESGIDPTNHDSGELDELA-RA--WHVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVIIG 161 (254)
T ss_dssp HHHHHHTTCCGGGSCHHHHHHHH-GG--GGSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCCCC
T ss_pred HHHHHHhCCCcCcCCHHHHHHHH-HH--HhhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEEEE
Confidence 01111122 12222222221 11 145678999999999886 889999999999999999999986 888888
Q ss_pred ecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 036723 146 FETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN 225 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~D 225 (290)
++.++. +||++.+|+.+++++|+++++|++|||+.+|
T Consensus 162 ~~~~~~-------------------------------------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~D 198 (254)
T 3umg_A 162 SDINRK-------------------------------------------YKPDPQAYLRTAQVLGLHPGEVMLAAAHNGD 198 (254)
T ss_dssp HHHHTC-------------------------------------------CTTSHHHHHHHHHHTTCCGGGEEEEESCHHH
T ss_pred cCcCCC-------------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEeCChHh
Confidence 887665 7999999999999999999999999999999
Q ss_pred hHHHHhcCCeEEEec----CCC-------CCCCcceeecCHhHHHHHhHH
Q 036723 226 LETGKRLGLHTVWVG----TSH-------RAEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 226 i~~a~~aGi~~i~v~----~~~-------~~~~ad~v~~sl~el~~~l~~ 264 (290)
+++|+.+|+.+++++ ++. ....|+++++++.||.++|..
T Consensus 199 i~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 199 LEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 999999999999998 433 146789999999999987754
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=198.90 Aligned_cols=200 Identities=16% Similarity=0.169 Sum_probs=145.8
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-----HHHHcCCCCCHHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-----GLRAIGYQFDCDDF 86 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~ 86 (290)
++++|+|+||+||||+++...+..++.+ ...++|.+.... .+....|.... .+...+...+...+
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 96 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQE-----ICNRYDKKYSWD-----VKSLVMGKKALEAAQIIIDVLQLPMSKEEL 96 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHHTTCCHHHHHHHHHHHHTCSSCHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 4579999999999999966655555553 444556653321 11112232221 11222333444444
Q ss_pred HHHHhhcC--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHh-cCCCCcceeEEeec--ccCCCCCCccc
Q 036723 87 HSYVHGRL--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSR-LGLEDCFERIISFE--TLNSTDKGTVL 158 (290)
Q Consensus 87 ~~~~~~~~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~--~~~~~~~~~~~ 158 (290)
...+.+.. ......++||+.++|+.|+ ++++++||+........+.. +++..+|+.+++++ .+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~------- 169 (250)
T 3l5k_A 97 VEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQH------- 169 (250)
T ss_dssp HHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCS-------
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccC-------
Confidence 33222211 0135788999999998885 78999999998888777755 58888999999888 6654
Q ss_pred cccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC--CcEEEEcCCccchHHHHhcCCeE
Q 036723 159 VDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP--RKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~--~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+||+|++|+.+++++|+++ ++|++|||+.+|+++|+.+|+.+
T Consensus 170 ------------------------------------~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~ 213 (250)
T 3l5k_A 170 ------------------------------------GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQV 213 (250)
T ss_dssp ------------------------------------CTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEE
T ss_pred ------------------------------------CCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEE
Confidence 7999999999999999998 99999999999999999999999
Q ss_pred EEecCCCC----CCCcceeecCHhHHHHHhHH
Q 036723 237 VWVGTSHR----AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 237 i~v~~~~~----~~~ad~v~~sl~el~~~l~~ 264 (290)
+++.++.. ...|+++++++.||.+.|..
T Consensus 214 i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~ 245 (250)
T 3l5k_A 214 VMVPDGNLSRDLTTKATLVLNSLQDFQPELFG 245 (250)
T ss_dssp EECCCTTSCGGGSTTSSEECSCGGGCCGGGGT
T ss_pred EEEcCCCCchhhcccccEeecCHHHhhHHHhc
Confidence 99988763 56799999999999876644
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=192.85 Aligned_cols=204 Identities=18% Similarity=0.205 Sum_probs=149.8
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHH-------HHH-------HcccHH--------
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSL-------YKF-------YGTTLA-------- 72 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-------~~~-------~g~~~~-------- 72 (290)
+|+|+||+||||+++...+..++. .++...|++.... .+...+ ... .|....
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~-----~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYA-----TKARAHGLEVEPS-ALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVL 74 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHH-----HHHHHTTCCCCHH-HHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHH-----HHHHHhCCCCCHH-HHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHH
Confidence 579999999999997777766666 3566677764321 111111 111 111111
Q ss_pred -HHHHcCCCCCHHHH----HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEE
Q 036723 73 -GLRAIGYQFDCDDF----HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERII 144 (290)
Q Consensus 73 -~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~ 144 (290)
.+...+. .+...+ ...+........+.++||+.++|+.|+ ++++++||+... +...++.+|+..+|+.++
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~ 152 (263)
T 3k1z_A 75 QTFHLAGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVL 152 (263)
T ss_dssp HHHHHTTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEE
T ss_pred HHHHHcCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEE
Confidence 1111121 223332 222222222234678999999999885 789999998775 688899999999999999
Q ss_pred eecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-
Q 036723 145 SFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI- 223 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~- 223 (290)
++++.+. +||+|.+|+.+++++|++|++|++|||+.
T Consensus 153 ~~~~~~~-------------------------------------------~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~ 189 (263)
T 3k1z_A 153 TSEAAGW-------------------------------------------PKPDPRIFQEALRLAHMEPVVAAHVGDNYL 189 (263)
T ss_dssp EHHHHSS-------------------------------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHH
T ss_pred eecccCC-------------------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCcH
Confidence 9988775 79999999999999999999999999997
Q ss_pred cchHHHHhcCCeEEEecCCCCC-------CCcceeecCHhHHHHHhHHHHHhh
Q 036723 224 RNLETGKRLGLHTVWVGTSHRA-------EGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 224 ~Di~~a~~aGi~~i~v~~~~~~-------~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
+|+++|+++|+.++++.++... ..|+++++++.||.++|.++.+..
T Consensus 190 ~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~~~~~ 242 (263)
T 3k1z_A 190 CDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLEGSA 242 (263)
T ss_dssp HHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHHHHC-
T ss_pred HHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHHHhcC
Confidence 9999999999999999988642 269999999999999999987665
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=188.30 Aligned_cols=124 Identities=13% Similarity=0.194 Sum_probs=112.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...++|++.++|+.|+ ++++++||++.......++.+|+..+|+.+++++..+.
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------------- 153 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL----------------------- 153 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC-----------------------
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC-----------------------
Confidence 4678899999998885 78999999999999999999999999999999987765
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----CCCcc
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-----AEGVD 249 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-----~~~ad 249 (290)
+||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...|+
T Consensus 154 --------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~ 213 (233)
T 3umb_A 154 --------------------YKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPA 213 (233)
T ss_dssp --------------------CTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCS
T ss_pred --------------------CCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCC
Confidence 79999999999999999999999999999999999999999999977643 34699
Q ss_pred eeecCHhHHHHHhHH
Q 036723 250 YALESIHNIKEALPE 264 (290)
Q Consensus 250 ~v~~sl~el~~~l~~ 264 (290)
++++++.||.++|.+
T Consensus 214 ~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 214 AAGHDMRDLLQFVQA 228 (233)
T ss_dssp EEESSHHHHHHHHHC
T ss_pred EEECCHHHHHHHHHH
Confidence 999999999997754
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=187.27 Aligned_cols=123 Identities=19% Similarity=0.385 Sum_probs=109.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCc---hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNAD---KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
.++|++.++|+.|+ ++++++||+. .......++.+++..+|+.++++++.+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---------------------- 156 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLS---------------------- 156 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTC----------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCC----------------------
Confidence 45899999998885 7899999999 8888999999999999999999887765
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC----CCCc
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----AEGV 248 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----~~~a 248 (290)
.||+|.+++.+++++|++|++|++|||+. ||++||+.+|+.++++.++.. ...+
T Consensus 157 ---------------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~ 215 (235)
T 2om6_A 157 ---------------------YKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEER 215 (235)
T ss_dssp ---------------------CTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETT
T ss_pred ---------------------CCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCC
Confidence 79999999999999999999999999999 999999999999999987643 2347
Q ss_pred ceeecCHhHHHHHhHHH
Q 036723 249 DYALESIHNIKEALPEL 265 (290)
Q Consensus 249 d~v~~sl~el~~~l~~~ 265 (290)
+++++++.||.++|.++
T Consensus 216 ~~~~~~~~el~~~l~~~ 232 (235)
T 2om6_A 216 GFEIPSIANLKDVIELI 232 (235)
T ss_dssp EEEESSGGGHHHHHHHT
T ss_pred cchHhhHHHHHHHHHHH
Confidence 89999999999887654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=189.38 Aligned_cols=128 Identities=21% Similarity=0.347 Sum_probs=114.5
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
...++|++.++|+.|+ ++++++||+........++.+|+..+|+.+++++..+.
T Consensus 98 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~------------------------ 153 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGF------------------------ 153 (234)
T ss_dssp HCCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTB------------------------
T ss_pred hCCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCC------------------------
Confidence 3578899999999887 67899999999999999999999999999999987765
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC----CCCcce
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----AEGVDY 250 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----~~~ad~ 250 (290)
+||++.+++.+++++|++|++|++|||+. ||++||+.+|+.++++.++.. ...|++
T Consensus 154 -------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~ 214 (234)
T 3u26_A 154 -------------------FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDF 214 (234)
T ss_dssp -------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSE
T ss_pred -------------------CCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCE
Confidence 79999999999999999999999999998 999999999999999988754 237999
Q ss_pred eecCHhHHHHHhHHHHHh
Q 036723 251 ALESIHNIKEALPELWEV 268 (290)
Q Consensus 251 v~~sl~el~~~l~~~~~~ 268 (290)
+++++.||.++|.++.+.
T Consensus 215 ~~~~~~el~~~l~~~~~~ 232 (234)
T 3u26_A 215 IVSDLREVIKIVDELNGQ 232 (234)
T ss_dssp EESSTHHHHHHHHHHC--
T ss_pred eeCCHHHHHHHHHHHhhc
Confidence 999999999998876543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=190.62 Aligned_cols=203 Identities=15% Similarity=0.223 Sum_probs=147.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-----HHHcCCCCCHHH--
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-----LRAIGYQFDCDD-- 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~-- 85 (290)
+++|+|+||+||||+++...+...+.+ ...++|.+..... .+....|..... ....+.......
T Consensus 2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (229)
T 2fdr_A 2 SGFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEE----MGERFAGMTWKNILLQVESEASIPLSASLLD 72 (229)
T ss_dssp -CCSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHH----HHHHHTTCCHHHHHHHHHHHHCCCCCTHHHH
T ss_pred CCccEEEEcCCCCcCccHHHHHHHHHH-----HHHHhCCCCCHHH----HHHHHhCCCHHHHHHHHHHHcCCCCCHHHHH
Confidence 358999999999999976655555553 3444566543111 111111222111 111222222111
Q ss_pred -HHHHHhhcCCCCCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcc-eeEEeecccCCCCCCcccccccc
Q 036723 86 -FHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCF-ERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 86 -~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
+.+.+.+.. .....++|++.++|+.++.+++++||+........++++++..+| +.+++++..+.
T Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~------------ 139 (229)
T 2fdr_A 73 KSEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA------------ 139 (229)
T ss_dssp HHHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT------------
T ss_pred HHHHHHHHHh-hcCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHhCChHHhccceEEecccccc------------
Confidence 222222111 124577899999999999899999999999999999999999999 89998887654
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCC--CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVC--KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+ ||++.+++.+++++|++++++++|||+.+|++||+.+|+.++++++
T Consensus 140 -------------------------------~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~ 188 (229)
T 2fdr_A 140 -------------------------------DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTG 188 (229)
T ss_dssp -------------------------------TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred -------------------------------CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEec
Confidence 7 9999999999999999999999999999999999999999999988
Q ss_pred CCCC----------CCcceeecCHhHHHHHhHHHHHh
Q 036723 242 SHRA----------EGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 242 ~~~~----------~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
+... .+|+++++++.||.++|..+|..
T Consensus 189 ~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~ 225 (229)
T 2fdr_A 189 ASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEW 225 (229)
T ss_dssp STTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHTC-
T ss_pred CCccchhhhHHHhhcCCceeecCHHHHHHHHHHhhhh
Confidence 7542 13899999999999998887653
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=188.77 Aligned_cols=203 Identities=22% Similarity=0.325 Sum_probs=143.7
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHH---Hc-c---cHHH-HHHc-CCCCC--H
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKF---YG-T---TLAG-LRAI-GYQFD--C 83 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~---~g-~---~~~~-~~~~-~~~~~--~ 83 (290)
+|+|+||+||||+++...+...+.+.++++ ...+..... ..+...+... .. . .... +... +.... .
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENM--IRHGLPVDF-ETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWI 78 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHH--HHTTCCSCH-HHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHH
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHH--HHccccccH-HHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHH
Confidence 789999999999997666666666555553 122232221 1111111100 00 0 0111 1111 21111 1
Q ss_pred HHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 84 DDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
..+.+.+.+... ....++||+.++|+.|+ ++++++||+........++++|+..+|+.+++++.++.
T Consensus 79 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------- 148 (241)
T 2hoq_A 79 SAGVIAYHNTKF-AYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGV--------- 148 (241)
T ss_dssp HHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC---------
T ss_pred HHHHHHHHHHHH-hhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCC---------
Confidence 222222222211 23568899999999885 78999999999999999999999999999999987765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEe
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWV 239 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v 239 (290)
+||+|.+|+.+++++|++|++|++|||+. ||+++|+.+|+.++++
T Consensus 149 ----------------------------------~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v 194 (241)
T 2hoq_A 149 ----------------------------------KKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWF 194 (241)
T ss_dssp ----------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred ----------------------------------CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEE
Confidence 79999999999999999999999999998 9999999999999999
Q ss_pred cCCCC----C---CCcceeecCHhHHHHHhHH
Q 036723 240 GTSHR----A---EGVDYALESIHNIKEALPE 264 (290)
Q Consensus 240 ~~~~~----~---~~ad~v~~sl~el~~~l~~ 264 (290)
.++.. . ..|+++++++.||.++|.+
T Consensus 195 ~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~ 226 (241)
T 2hoq_A 195 RYGKHSERELEYRKYADYEIDNLESLLEVLAR 226 (241)
T ss_dssp CCSCCCHHHHTTGGGCSEEESSTTHHHHHHHH
T ss_pred CCCCCCcccccccCCCCEEECCHHHHHHHHHH
Confidence 77653 1 2689999999999987754
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=188.11 Aligned_cols=207 Identities=15% Similarity=0.165 Sum_probs=147.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCc--ccHHHHHH---HHHHHHcccHHHHH---------HcC
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEE--AKVPELCV---SLYKFYGTTLAGLR---------AIG 78 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~--~~~~~~~~---~~~~~~g~~~~~~~---------~~~ 78 (290)
|++|+|+||+||||+|+...+..++.++++. +...|+.. .....+.. ..+...|.....+. ..+
T Consensus 11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 88 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAI--LSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTE 88 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHHHHHHHHHHHHH--HTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTT
T ss_pred CceeEEEEeCCCCCccCcHhHHHHHHHHHHH--HHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcC
Confidence 4689999999999999776666666654443 34566654 11101001 11122344332111 112
Q ss_pred CCCCHH---HHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCC
Q 036723 79 YQFDCD---DFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTD 153 (290)
Q Consensus 79 ~~~~~~---~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~ 153 (290)
...... .+.+.+.+.. .....++|++.++|+.|+ ++++++||+........++.+++..+|+.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~------- 160 (251)
T 2pke_A 89 ARIEARDIQRIVEIGRATL-QHPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV------- 160 (251)
T ss_dssp TCCCHHHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE-------
T ss_pred CCCChHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee-------
Confidence 222222 2222222222 245688999999998874 779999999999999999999999999988773
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhc
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRL 232 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~a 232 (290)
+||++.+++.+++++|++|++|++|||+. +|+.+|+.+
T Consensus 161 -----------------------------------------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~a 199 (251)
T 2pke_A 161 -----------------------------------------SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAI 199 (251)
T ss_dssp -----------------------------------------SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHT
T ss_pred -----------------------------------------CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHC
Confidence 59999999999999999999999999999 999999999
Q ss_pred CCeEEEecCCCC----------CCCcce-eecCHhHHHHHhHHHHHhhC
Q 036723 233 GLHTVWVGTSHR----------AEGVDY-ALESIHNIKEALPELWEVAG 270 (290)
Q Consensus 233 Gi~~i~v~~~~~----------~~~ad~-v~~sl~el~~~l~~~~~~~~ 270 (290)
|+.++++.++.. ...|++ +++++.||.++|..+..+.|
T Consensus 200 G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~~~~~ 248 (251)
T 2pke_A 200 GGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRALDAQAG 248 (251)
T ss_dssp TCEEEECCCC-------------CCTTEEECSSGGGHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHHHhChhhc
Confidence 999999976542 246888 99999999999988876654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=190.97 Aligned_cols=201 Identities=19% Similarity=0.237 Sum_probs=131.3
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCC--CCCHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGY--QFDCDDF 86 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~--~~~~~~~ 86 (290)
++|+|+||+||||+++...+...+.+ ....+|.+.... .+....|...... ...+. ..+...+
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKH-----IAEQIDIPFDRD-----MNERLKGISREESLESILIFGGAETKYTNAEK 70 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHH
Confidence 37899999999999966666555553 345567663321 1112223222111 11121 2222222
Q ss_pred H-------HHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 87 H-------SYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 87 ~-------~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
. +.+...+. .....++||+.++|+.|+ ++++++||+.. ....++.+|+..+|+.+++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~---- 144 (233)
T 3nas_A 71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAK---- 144 (233)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------
T ss_pred HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCC----
Confidence 1 12222111 122347999999998885 78999999865 7788999999999999998887664
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
+||+|.+|+.+++++|++|++|++|||+.+|++||+.+|+.
T Consensus 145 ---------------------------------------~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~ 185 (233)
T 3nas_A 145 ---------------------------------------GKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMF 185 (233)
T ss_dssp -------------------------------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCE
T ss_pred ---------------------------------------CCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCE
Confidence 79999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCcceeecCHhHHH-HHhHHHHHhh
Q 036723 236 TVWVGTSHRAEGVDYALESIHNIK-EALPELWEVA 269 (290)
Q Consensus 236 ~i~v~~~~~~~~ad~v~~sl~el~-~~l~~~~~~~ 269 (290)
++++++......|+++++++.|+. ..+.+.|...
T Consensus 186 ~~~~~~~~~~~~ad~v~~s~~el~~~~~~~~~~~~ 220 (233)
T 3nas_A 186 AVGVGQGQPMLGADLVVRQTSDLTLELLHEEWEQY 220 (233)
T ss_dssp EEECC-------CSEECSSGGGCCHHHHHHHHHHH
T ss_pred EEEECCccccccCCEEeCChHhCCHHHHHHHHHHH
Confidence 999988776558999999999885 4455556554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-25 Score=183.60 Aligned_cols=193 Identities=17% Similarity=0.251 Sum_probs=139.5
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHc-ccHHHH-HHc--CCCCCH---HH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYG-TTLAGL-RAI--GYQFDC---DD 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g-~~~~~~-~~~--~~~~~~---~~ 85 (290)
|++|+|+||+||||+++...+...+.+.+ .++|+..... . +....| ...... ... ....+. ..
T Consensus 2 M~~k~i~fDlDGTL~~~~~~~~~~~~~~~-----~~~g~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEAILSGIEETF-----AQFSIPYDKE-K----VREFIFKYSVQDLLVRVAEDRNLDVEVLNQ 71 (207)
T ss_dssp --CCEEEECTBTTTEECHHHHHHHHHHHH-----HHHTCCCCHH-H----HHHHHHHSCHHHHHHHHHHHHTCCHHHHHH
T ss_pred CcccEEEEeCCCcccccHHHHHHHHHHHH-----HHcCCCCCHH-H----HHHHHccccHHHHHHHhhchhhccHHHHHH
Confidence 35899999999999997666666655433 3345543221 1 111122 211111 100 001111 11
Q ss_pred HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 86 FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 86 ~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
+...+.+.+ .....+.|++.++|+.++ ++++++|++...... .++.+++..+|+.+++++..+.
T Consensus 72 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~----------- 138 (207)
T 2go7_A 72 VRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFV----------- 138 (207)
T ss_dssp HHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCC-----------
T ss_pred HHHHHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCC-----------
Confidence 222222222 245678899999998885 779999999998888 9999999999999998887654
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
+||++.+++.+++++|++++++++|||+.||++||+.+|+.+++++++
T Consensus 139 --------------------------------~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~ 186 (207)
T 2go7_A 139 --------------------------------RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 186 (207)
T ss_dssp --------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred --------------------------------CCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence 799999999999999999999999999999999999999999999988
Q ss_pred CCCCCcceeecCHhHHHHHh
Q 036723 243 HRAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 243 ~~~~~ad~v~~sl~el~~~l 262 (290)
. . .|+++++++.||.++|
T Consensus 187 ~-~-~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 187 T-Y-EGNHRIQALADISRIF 204 (207)
T ss_dssp S-C-TTEEECSSTTHHHHHT
T ss_pred C-C-CCCEEeCCHHHHHHHH
Confidence 7 4 8999999999998866
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=184.73 Aligned_cols=125 Identities=18% Similarity=0.370 Sum_probs=110.6
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...++|++.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++..+.
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------------- 149 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV----------------------- 149 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC-----------------------
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCC-----------------------
Confidence 4678899999998885 78999999999999999999999999999999887765
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----CCCcc
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-----AEGVD 249 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-----~~~ad 249 (290)
+||+|.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...|+
T Consensus 150 --------------------~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ 209 (232)
T 1zrn_A 150 --------------------YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPD 209 (232)
T ss_dssp --------------------CTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCS
T ss_pred --------------------CCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCC
Confidence 79999999999999999999999999999999999999999999977632 35689
Q ss_pred eeecCHhHHHHHhHHH
Q 036723 250 YALESIHNIKEALPEL 265 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~ 265 (290)
++++++.||.++|.+.
T Consensus 210 ~~~~~~~el~~~l~~~ 225 (232)
T 1zrn_A 210 WEVTSLRAVVELFETA 225 (232)
T ss_dssp EEESSHHHHHTTC---
T ss_pred EEECCHHHHHHHHHhh
Confidence 9999999999988664
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=183.64 Aligned_cols=120 Identities=19% Similarity=0.342 Sum_probs=107.4
Q ss_pred CCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 97 MMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
....++|++.++|+.|+ ++++++||++.. ++.+|+..+|+.+++++..+.
T Consensus 102 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~----------------------- 153 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGI----------------------- 153 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTC-----------------------
T ss_pred ccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCC-----------------------
Confidence 45678999999998886 788999998775 788899999999999987765
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC----CCCcc
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----AEGVD 249 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----~~~ad 249 (290)
+||+|.+|+.+++++|++|++|++|||+. +|+++|+.+|+.++++.++.. ...|+
T Consensus 154 --------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~ 213 (230)
T 3vay_A 154 --------------------GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPD 213 (230)
T ss_dssp --------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCS
T ss_pred --------------------CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCC
Confidence 79999999999999999999999999998 999999999999999987654 45789
Q ss_pred eeecCHhHHHHHhHH
Q 036723 250 YALESIHNIKEALPE 264 (290)
Q Consensus 250 ~v~~sl~el~~~l~~ 264 (290)
++++++.||.++|.+
T Consensus 214 ~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 214 AEIHNLSQLPEVLAR 228 (230)
T ss_dssp EEESSGGGHHHHHHT
T ss_pred eeECCHHHHHHHHHh
Confidence 999999999998764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=186.37 Aligned_cols=126 Identities=17% Similarity=0.221 Sum_probs=112.0
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...++||+.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++..+.
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------------- 159 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKI----------------------- 159 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTC-----------------------
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCC-----------------------
Confidence 4678899999998885 78999999999999999999999999999999987765
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC----CCCc-c
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR----AEGV-D 249 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~----~~~a-d 249 (290)
+||+|.+|+.+++++|++|++|++|||+.+|+++|+.+|+.++++.++.. ...| +
T Consensus 160 --------------------~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~ 219 (240)
T 2no4_A 160 --------------------YKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLK 219 (240)
T ss_dssp --------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCS
T ss_pred --------------------CCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCc
Confidence 79999999999999999999999999999999999999999999987653 2457 9
Q ss_pred eeecCHhHHHHHhHHHH
Q 036723 250 YALESIHNIKEALPELW 266 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~~ 266 (290)
++++++.||.++|.++.
T Consensus 220 ~~~~~~~el~~~l~~~~ 236 (240)
T 2no4_A 220 HQVNSLSELWPLLAKNV 236 (240)
T ss_dssp EEESSGGGHHHHHCC--
T ss_pred eeeCCHHHHHHHHHHhh
Confidence 99999999998876543
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-25 Score=186.11 Aligned_cols=203 Identities=14% Similarity=0.151 Sum_probs=142.8
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCccc-H--------HHHHHHHHHHHcccHH----HHHHcCCC
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAK-V--------PELCVSLYKFYGTTLA----GLRAIGYQ 80 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~-~--------~~~~~~~~~~~g~~~~----~~~~~~~~ 80 (290)
++|+|+||+||||+++...+...+.+++++. .|.+... . ......+...+|.... .....
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 75 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKA--- 75 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHH---
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHH----hCCCCccchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHH---
Confidence 5899999999999997777766666444431 3443221 0 0111122222222111 00000
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCc
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGT 156 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~ 156 (290)
...+...+.+.+......++||+.++|+.|+ ++++++||+........++.+|+..+|+.++++++...
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----- 148 (234)
T 2hcf_A 76 --KETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD----- 148 (234)
T ss_dssp --HHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS-----
T ss_pred --HHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcC-----
Confidence 1112222222222244678899999998874 46899999999999999999999999998776654432
Q ss_pred cccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEcCCccchHHHHhcCC
Q 036723 157 VLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN--INPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~--~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
.+||.+.+++.+++++| ++|++|++|||+.+|+++|+.+|+
T Consensus 149 -------------------------------------~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~ 191 (234)
T 2hcf_A 149 -------------------------------------RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDA 191 (234)
T ss_dssp -------------------------------------GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred -------------------------------------ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCC
Confidence 15788999999999999 999999999999999999999999
Q ss_pred eEEEecCCCC------CCCcceeecCHhHHHHHhHHHHH
Q 036723 235 HTVWVGTSHR------AEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 235 ~~i~v~~~~~------~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
.++++.++.. ..+|++++.++.||.++|.++..
T Consensus 192 ~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~~~~ 230 (234)
T 2hcf_A 192 RSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILT 230 (234)
T ss_dssp EEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHHC
T ss_pred cEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHHHhc
Confidence 9999988753 23589999999999999887654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-25 Score=189.53 Aligned_cols=199 Identities=18% Similarity=0.276 Sum_probs=144.0
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HH----cCCCC
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RA----IGYQF 81 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~----~~~~~ 81 (290)
.+.++|+|+||+||||+++...+..++.+ +...+|.+......+. ...|...... .. .+...
T Consensus 19 ~~~~~k~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (243)
T 2hsz_A 19 GMTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVM----TWIGNGADVLSQRAVDWACKQAEKEL 89 (243)
T ss_dssp CCSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHH----HHCSSCHHHHHHHHHHHHHHHHTCCC
T ss_pred CCccCCEEEEcCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhCchHHHHHHHHhhhhhccccccC
Confidence 45568999999999999976666555542 4555666543321111 1111111100 00 01122
Q ss_pred CHHH-------HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCC
Q 036723 82 DCDD-------FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNS 151 (290)
Q Consensus 82 ~~~~-------~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~ 151 (290)
.... +.+.+.... .....++||+.++|+.|+ ++++++||+....+...++.+|+..+|+.+++++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~ 168 (243)
T 2hsz_A 90 TEDEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE 168 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS
T ss_pred CHHHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC
Confidence 2222 222222222 245678999999999885 78999999999999999999999999999998876654
Q ss_pred CCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHh
Q 036723 152 TDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~ 231 (290)
.||++.+++.+++++|+++++|++|||+.+|+.+|+.
T Consensus 169 -------------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ 205 (243)
T 2hsz_A 169 -------------------------------------------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS 205 (243)
T ss_dssp -------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred -------------------------------------------CCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHH
Confidence 7999999999999999999999999999999999999
Q ss_pred cCCeEEEecCCCC------CCCcceeecCHhHHHHHh
Q 036723 232 LGLHTVWVGTSHR------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 232 aGi~~i~v~~~~~------~~~ad~v~~sl~el~~~l 262 (290)
+|+.++++.++.. ...++++++++.||.+++
T Consensus 206 aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 206 AGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp HTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred CCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence 9999999987642 346899999999987654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-25 Score=184.34 Aligned_cols=200 Identities=20% Similarity=0.187 Sum_probs=138.8
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHc--CCCCCHHH-----
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAI--GYQFDCDD----- 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~----- 85 (290)
|++|+|+||+||||+++...+...+.+ ....+|.+...... +....|......... +.. ....
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~ 73 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRS-----VLERHGYTGITDDM----IKRTIGKTLEESFSILTGIT-DADQLESFR 73 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHH----HHTTTTSCHHHHHHHHHCCC-CHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCCHHH----HHHHhCCcHHHHHHHHcCCC-CHHHHHHHH
Confidence 458999999999999976666665553 34445554332211 111223322211111 110 1111
Q ss_pred --HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 86 --FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 86 --~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+...+.+.. .....+.|++.++++.|+ ++++++|+.........++.+++..+|+.+++++....
T Consensus 74 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 143 (225)
T 3d6j_A 74 QEYSKEADIYM-NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTH--------- 143 (225)
T ss_dssp HHHHHHHHHHT-GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSS---------
T ss_pred HHHHHHHHHhc-cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCC---------
Confidence 111222222 234567899999998885 77899999999999999999999999999998876654
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||++.+++.+++++|++++++++|||+.||++||+.+|+.++++.
T Consensus 144 ----------------------------------~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~ 189 (225)
T 3d6j_A 144 ----------------------------------HKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVT 189 (225)
T ss_dssp ----------------------------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred ----------------------------------CCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 7999999999999999999999999999999999999999999987
Q ss_pred CCCC------CCCcceeecCHhHHHHHhHHHH
Q 036723 241 TSHR------AEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 241 ~~~~------~~~ad~v~~sl~el~~~l~~~~ 266 (290)
++.. ..+|++++++++||.+.|.++.
T Consensus 190 ~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~ 221 (225)
T 3d6j_A 190 SGMTTAQEFQAYPYDRIISTLGQLISVPEDKS 221 (225)
T ss_dssp TSSCCTTGGGGSCCSEEESSGGGGC-------
T ss_pred CCCCChHHHhhcCCCEEECCHHHHHHhhhhhc
Confidence 7653 2248999999999999887654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=182.59 Aligned_cols=194 Identities=13% Similarity=0.162 Sum_probs=137.3
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-----HHHcCC-CCCHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-----LRAIGY-QFDCDDFH 87 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~-~~~~~~~~ 87 (290)
++|+|+||+||||+++...+...+.+ ...++|.+...... +....|..... ....+. ......+.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNE----LPDTLGLRIDMVVDLWYARQPWNGPSRQEVV 78 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGG----SCCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHH-----HHHHcCCCCChHHH----HHHHhCCCHHHHHHHHHHHcCCCccCHHHHH
Confidence 58999999999999976666555553 34445654331000 00001111110 001111 11122221
Q ss_pred H----HHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 88 S----YVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 88 ~----~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
. .+.+.+ .....+.|++.++|+.|+ ++++++|+.........++.+++..+|+.+++++..+.
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------- 148 (226)
T 1te2_A 79 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY--------- 148 (226)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC---------
T ss_pred HHHHHHHHHHH-hccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCC---------
Confidence 1 111111 123567899999988774 77899999999999999999999999999998887654
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||++.+++.+++++|++++++++|||+.||++||+.+|+.++++.
T Consensus 149 ----------------------------------~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~ 194 (226)
T 1te2_A 149 ----------------------------------SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVP 194 (226)
T ss_dssp ----------------------------------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred ----------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 7999999999999999999999999999999999999999999988
Q ss_pred CCCC-----CCCcceeecCHhHHHH
Q 036723 241 TSHR-----AEGVDYALESIHNIKE 260 (290)
Q Consensus 241 ~~~~-----~~~ad~v~~sl~el~~ 260 (290)
++.. ...|++++.++.||.+
T Consensus 195 ~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 195 APEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp CTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred CCCCcccccccccCeEECCHHHHhH
Confidence 7653 4568999999999865
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=177.81 Aligned_cols=197 Identities=17% Similarity=0.213 Sum_probs=136.2
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHH---HHHHcccHHH---------HHHcCCCCC
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSL---YKFYGTTLAG---------LRAIGYQFD 82 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~---~~~~g~~~~~---------~~~~~~~~~ 82 (290)
+|+|+||+||||+++...+.......++. +...|........+.... ....+..... ....+...+
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDL--LKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIA 85 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHH--TGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCC
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCC
Confidence 89999999999999766555554433333 223342111111111000 0111221111 111233333
Q ss_pred HHHHHH---HHhhcCCCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 83 CDDFHS---YVHGRLPYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 83 ~~~~~~---~~~~~~~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
.+.... .+.+.. .....++|++.++|+.|+ ++++++||+........++.+++..+|+.+++.
T Consensus 86 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~--------- 155 (234)
T 3ddh_A 86 ADIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM--------- 155 (234)
T ss_dssp HHHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE---------
T ss_pred HHHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec---------
Confidence 333322 232322 245788999999998883 789999999999999999999999999998864
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCC
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGL 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi 234 (290)
+||++.+++.+++++|++|++|++|||+. +|++||+.+|+
T Consensus 156 ---------------------------------------~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~ 196 (234)
T 3ddh_A 156 ---------------------------------------SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGG 196 (234)
T ss_dssp ---------------------------------------SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTC
T ss_pred ---------------------------------------CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCC
Confidence 59999999999999999999999999997 99999999999
Q ss_pred eEEEecCCC----C-----CCCcceeecCHhHHHHHh
Q 036723 235 HTVWVGTSH----R-----AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 235 ~~i~v~~~~----~-----~~~ad~v~~sl~el~~~l 262 (290)
.++++.++. . ...++++++++.||.++|
T Consensus 197 ~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 197 YGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp EEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred eEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence 999994432 2 233599999999999865
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-23 Score=179.45 Aligned_cols=126 Identities=19% Similarity=0.379 Sum_probs=113.4
Q ss_pred CCCCChhHHHHHHcCC-CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 98 MLKPDPVLRNLLLSLP-IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~-~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
...++||+.++|+.|+ ++++++||++...+...++++|+..+|+.++++++++.
T Consensus 91 ~~~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------- 145 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV------------------------- 145 (253)
T ss_dssp SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC-------------------------
T ss_pred cCCCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCC-------------------------
Confidence 4678999999999885 77999999999999999999999999999999987765
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC---------------
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT--------------- 241 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~--------------- 241 (290)
+||+|.+|+.+++++|++|++|++|||+.+|+++|+.+|+.++++++
T Consensus 146 ------------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~ 207 (253)
T 1qq5_A 146 ------------------FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTI 207 (253)
T ss_dssp ------------------CTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSC
T ss_pred ------------------CCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccc
Confidence 79999999999999999999999999999999999999999999987
Q ss_pred --------CC-----CCCCcceeecCHhHHHHHhHHHH
Q 036723 242 --------SH-----RAEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 242 --------~~-----~~~~ad~v~~sl~el~~~l~~~~ 266 (290)
+. ....|+++++++.||.++|.++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 245 (253)
T 1qq5_A 208 APLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (253)
T ss_dssp CHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred cccccccccccccCCCCCCCCeeeCCHHHHHHHHHHhc
Confidence 21 14569999999999999887653
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=185.34 Aligned_cols=200 Identities=13% Similarity=0.130 Sum_probs=133.5
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHccc------------H-HHHHHcCC
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTT------------L-AGLRAIGY 79 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~------------~-~~~~~~~~ 79 (290)
|++|+|+||+||||+++...+..++.+ .....|.+... ..+...+....|.. . ..+...+.
T Consensus 1 M~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~ 74 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDL-RKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGI 74 (220)
T ss_dssp CCCCEEEECSBTTTEEEEETTHHHHHH-----HHHHTTCCCCH-HHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTC
T ss_pred CCceEEEEcCCCceecccccHHHHHHH-----HHHHhCCCCCH-HHHHHHHHHHhhhccCCCccccccccHHHHHHHcCC
Confidence 358999999999999977777766653 44556765432 12222222222321 1 12222333
Q ss_pred CCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCc
Q 036723 80 QFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGT 156 (290)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~ 156 (290)
....+................++||+.++|+.|+ ++++++||+.. .+...++++|+..+|+.++++++.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~----- 148 (220)
T 2zg6_A 75 YPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKA----- 148 (220)
T ss_dssp CCCHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC------------
T ss_pred CCcHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCC-----
Confidence 2222222222222112234678999999999885 77999999977 47888999999999999999887765
Q ss_pred cccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCcc-chHHHHhcCCe
Q 036723 157 VLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIR-NLETGKRLGLH 235 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~-Di~~a~~aGi~ 235 (290)
+||+|++|+.+++++|++| ++|||+.+ |+.+|+++|+.
T Consensus 149 --------------------------------------~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~ 187 (220)
T 2zg6_A 149 --------------------------------------VKPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVD 187 (220)
T ss_dssp ------------------------------------------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEE
T ss_pred --------------------------------------CCCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCe
Confidence 7999999999999999988 99999998 99999999999
Q ss_pred EEEecCCCCCCCcceeecCHhHHHHHhHHH
Q 036723 236 TVWVGTSHRAEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 236 ~i~v~~~~~~~~ad~v~~sl~el~~~l~~~ 265 (290)
++++.++......+++++++.||.++|.++
T Consensus 188 ~i~v~~~~~~~~~~~~i~~l~el~~~l~~~ 217 (220)
T 2zg6_A 188 PILLDRYDFYPDVRDRVKNLREALQKIEEM 217 (220)
T ss_dssp EEEBCTTSCCTTCCSCBSSHHHHHHHHHHH
T ss_pred EEEECCCCCCCCcceEECCHHHHHHHHHHh
Confidence 999976532222267899999999887664
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=186.04 Aligned_cols=199 Identities=14% Similarity=0.171 Sum_probs=141.3
Q ss_pred CCccEEEEecCCCcccCCC-ChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH---------------HHH
Q 036723 13 QKYDCLLFDLDDTIYPLTS-GLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG---------------LRA 76 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~-~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~---------------~~~ 76 (290)
|++|+|+||+||||+++.. .+..++.++ +.+.|++.... . +....|..... ...
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~-----l~~~G~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEI-----FHKRGVAITAE-E----ARKPMGLLKIDHVRALTEMPRIASEWNRV 73 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHH-----HHTTTCCCCHH-H----HHTTTTSCHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHH-----HHHcCCCCCHH-H----HHHHhccchHHHHHHhcccHHHHHHHHHH
Confidence 4589999999999999776 566666643 33456543211 0 11111111100 011
Q ss_pred cCCCCCHHHHHH-------HHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc-eeEEe
Q 036723 77 IGYQFDCDDFHS-------YVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF-ERIIS 145 (290)
Q Consensus 77 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~~ 145 (290)
.+...+...+.. .+.... .....++|++.++|+.|+ ++++++||.........++.+++..+| +.+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~ 152 (267)
T 1swv_A 74 FRQLPTEADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVT 152 (267)
T ss_dssp HSSCCCHHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBC
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHhh-ccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheec
Confidence 122222222211 111111 234677899999988874 788999999999999899988887775 88887
Q ss_pred ecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCcc
Q 036723 146 FETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDSIR 224 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~~ 224 (290)
++.... +||++.+++.+++++|+++ ++|++|||+.|
T Consensus 153 ~~~~~~-------------------------------------------~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~n 189 (267)
T 1swv_A 153 PDDVPA-------------------------------------------GRPYPWMCYKNAMELGVYPMNHMIKVGDTVS 189 (267)
T ss_dssp GGGSSC-------------------------------------------CTTSSHHHHHHHHHHTCCSGGGEEEEESSHH
T ss_pred CCccCC-------------------------------------------CCCCHHHHHHHHHHhCCCCCcCEEEEeCCHH
Confidence 776654 7999999999999999999 99999999999
Q ss_pred chHHHHhcCCeEEEecCCCC-----------------------------CCCcceeecCHhHHHHHhHHH
Q 036723 225 NLETGKRLGLHTVWVGTSHR-----------------------------AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 225 Di~~a~~aGi~~i~v~~~~~-----------------------------~~~ad~v~~sl~el~~~l~~~ 265 (290)
|++||+.+|+.++++.++.. ..+|+++++++.||.++|..+
T Consensus 190 Di~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 259 (267)
T 1swv_A 190 DMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 259 (267)
T ss_dssp HHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHH
Confidence 99999999999999988754 235999999999999988654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=175.34 Aligned_cols=120 Identities=16% Similarity=0.262 Sum_probs=107.3
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
..++||+.+ |+.|+ ++++++||++...+...++++|+..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------------------- 126 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKE------------------------- 126 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC-------------------------
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCC-------------------------
Confidence 577889888 87775 78999999999999999999999999999999887765
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----CCCccee
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-----AEGVDYA 251 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-----~~~ad~v 251 (290)
+||+|++++.+++++| |++|++|||+.+|+++|+.+|+.++++.++.. ...|+++
T Consensus 127 ------------------~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~ 186 (201)
T 2w43_A 127 ------------------YKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVI 186 (201)
T ss_dssp ------------------CTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEE
T ss_pred ------------------CCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEE
Confidence 7999999999999999 99999999999999999999999999987543 3468999
Q ss_pred ecCHhHHHHHhHH
Q 036723 252 LESIHNIKEALPE 264 (290)
Q Consensus 252 ~~sl~el~~~l~~ 264 (290)
++++.||.++|.+
T Consensus 187 ~~~~~el~~~l~~ 199 (201)
T 2w43_A 187 VNDFKELYEWILR 199 (201)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHh
Confidence 9999999987765
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=182.67 Aligned_cols=117 Identities=9% Similarity=0.121 Sum_probs=102.1
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc---CCCCcceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL---GLEDCFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
....++||+.++|+.|+ ++++|+||++......+++++ |+..+|+.++++ +++
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-------------------- 185 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-------------------- 185 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC--------------------
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC--------------------
Confidence 45788999999999985 789999999999888888854 589999999887 554
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCC-----
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRA----- 245 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~----- 245 (290)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.+|++.++...
T Consensus 186 ------------------------~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~ 241 (261)
T 1yns_A 186 ------------------------HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDD 241 (261)
T ss_dssp ------------------------CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHH
T ss_pred ------------------------CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCccccc
Confidence 499999999999999999999999999999999999999999999764431
Q ss_pred -CCcceeecCHhHH
Q 036723 246 -EGVDYALESIHNI 258 (290)
Q Consensus 246 -~~ad~v~~sl~el 258 (290)
..++++++++.||
T Consensus 242 ~~~~~~~i~~l~el 255 (261)
T 1yns_A 242 EKTYYSLITSFSEL 255 (261)
T ss_dssp HHHHSCEESSGGGC
T ss_pred ccCCCEEECCHHHh
Confidence 3578899998876
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=176.75 Aligned_cols=189 Identities=16% Similarity=0.219 Sum_probs=131.5
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCC-cccHHHHHHHHHHHHcccHHH-----HHHcCCCCCHHHH--
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIE-EAKVPELCVSLYKFYGTTLAG-----LRAIGYQFDCDDF-- 86 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~-- 86 (290)
+|+|+||+||||+++...+...+.+ ...++|.+ .... ......|..... +...+...+....
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQ-----FNEQLKGVSREDSLQKILDLADKKVSAEEFKE 71 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCSHH-----HHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHH-----HHHHcCCCCCCHH-----HHHHhCCCCHHHHHHHHHHHhCCCCChHHHHH
Confidence 7899999999999966656555553 33445655 2211 000111221111 1111212222211
Q ss_pred -----HHHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 87 -----HSYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 87 -----~~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
...+..... .....+.|++.++|+.|+ ++++++|+. ......++.+++..+|+.+++++..+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~------ 143 (221)
T 2wf7_A 72 LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAA------ 143 (221)
T ss_dssp HHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSS------
T ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCC------
Confidence 111222111 124577899999998874 788999988 456678889999999999988877664
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+||+|.+++.+++++|++|++|++|||+.||++||+.+|+.++
T Consensus 144 -------------------------------------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~ 186 (221)
T 2wf7_A 144 -------------------------------------SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPI 186 (221)
T ss_dssp -------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -------------------------------------CCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEE
Confidence 7999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCcceeecCHhHH
Q 036723 238 WVGTSHRAEGVDYALESIHNI 258 (290)
Q Consensus 238 ~v~~~~~~~~ad~v~~sl~el 258 (290)
+++.......|++++.+++|+
T Consensus 187 ~~~~~~~~~~a~~v~~~~~el 207 (221)
T 2wf7_A 187 GVGRPEDLGDDIVIVPDTSHY 207 (221)
T ss_dssp EESCHHHHCSSSEEESSGGGC
T ss_pred EECCHHHhccccchhcCHHhC
Confidence 997644333799999999987
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-23 Score=171.82 Aligned_cols=128 Identities=16% Similarity=0.317 Sum_probs=110.0
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCch---HHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADK---THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
..+.++||+.++|+.|+ ++++++||+.. ..+...++.+|+..+|+.++++++....+
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~----------------- 93 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPG----------------- 93 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTT-----------------
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccccc-----------------
Confidence 34688999999999985 78999999987 88999999999999999999988652100
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHhcCCeEEEecCCCC-----
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDS-IRNLETGKRLGLHTVWVGTSHR----- 244 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs-~~Di~~a~~aGi~~i~v~~~~~----- 244 (290)
..+||+|++|+.+++++|++|++|++|||+ .+|+.+|+++|+.++++.++..
T Consensus 94 ----------------------~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~ 151 (189)
T 3ib6_A 94 ----------------------KMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDE 151 (189)
T ss_dssp ----------------------CCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSS
T ss_pred ----------------------CCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCcccccccc
Confidence 027999999999999999999999999999 6999999999999999987653
Q ss_pred ---CCCcceeec--CHhHHHHHhH
Q 036723 245 ---AEGVDYALE--SIHNIKEALP 263 (290)
Q Consensus 245 ---~~~ad~v~~--sl~el~~~l~ 263 (290)
...|+++++ ++.+|.++|.
T Consensus 152 ~~~~~~~~~v~~~~~l~~l~~~l~ 175 (189)
T 3ib6_A 152 RLPLVAPPFVIPVWDLADVPEALL 175 (189)
T ss_dssp CCCBCSSSCEEEESSGGGHHHHHH
T ss_pred ccccCCCcceeccccHHhHHHHHH
Confidence 127899999 9999988653
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=169.64 Aligned_cols=177 Identities=18% Similarity=0.289 Sum_probs=127.8
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH--c-ccHHH-HHHc----CCCCCHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY--G-TTLAG-LRAI----GYQFDCD 84 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~--g-~~~~~-~~~~----~~~~~~~ 84 (290)
|++|+|+||+||||+++.. ....+. .....+|.+..............+ + ..... +... +.....+
T Consensus 2 M~~k~viFDlDGTL~d~~~-~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW-DREQRA-----DVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPE 75 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS-CHHHHH-----HHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHH
T ss_pred CCceEEEEeCCCeeECCCc-chHHHH-----HHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHH
Confidence 4589999999999999653 344443 245556765543322222222221 1 11221 1111 1122233
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 85 DFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+.+. ....++|++.++|+.|+ .+++++||++.......++.+|+..+|+.+++++..+.
T Consensus 76 ~~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~----------- 139 (200)
T 3cnh_A 76 DFRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGV----------- 139 (200)
T ss_dssp HHHHHHH-----HTCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSC-----------
T ss_pred HHHHHHH-----hcCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCC-----------
Confidence 3333322 23458999999999885 37899999999999999999999999999999887765
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
+||+|+.++.+++++|++|++|++|||+.+|+++|+.+|+.++++.++
T Consensus 140 --------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 140 --------------------------------MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp --------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred --------------------------------CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 799999999999999999999999999999999999999999999765
Q ss_pred C
Q 036723 243 H 243 (290)
Q Consensus 243 ~ 243 (290)
.
T Consensus 188 ~ 188 (200)
T 3cnh_A 188 A 188 (200)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=173.37 Aligned_cols=177 Identities=23% Similarity=0.277 Sum_probs=125.7
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHH---HHHHHHHHH--c-ccHHHH-----HHcCCCC
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPE---LCVSLYKFY--G-TTLAGL-----RAIGYQF 81 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~---~~~~~~~~~--g-~~~~~~-----~~~~~~~ 81 (290)
+++|+|+||+||||+++.. ..+. + .....|++...... .....+..+ | .+...+ ...+...
T Consensus 26 ~~ik~viFD~DGTL~d~~~---~~~~----~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 97 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDR---ERCI----E-NFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMV 97 (229)
T ss_dssp CCCCEEEECSBTTTBCBCH---HHHH----H-HHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEeCCCeEEeCCh---HHHH----H-HHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCC
Confidence 3589999999999999542 2222 1 33455664322110 001111111 1 111111 1224444
Q ss_pred CHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHH------HhcCCCCcceeEEeecccCCCC
Q 036723 82 DCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVL------SRLGLEDCFERIISFETLNSTD 153 (290)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l------~~~gl~~~f~~i~~~~~~~~~~ 153 (290)
+.+.+.+.+.... ..+.||+.++|+.|+ ++++++||+.......++ +.+|+..+|+.++++++.+.
T Consensus 98 ~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~-- 171 (229)
T 4dcc_A 98 SDKQIDAAWNSFL----VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKM-- 171 (229)
T ss_dssp CHHHHHHHHHTTB----CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTC--
T ss_pred CHHHHHHHHHHHH----HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCC--
Confidence 5555555554332 246799999999987 789999999999888555 77888889999999988775
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+||+|.+|+.+++++|++|++|++|||+.+|+++|+++|
T Consensus 172 -----------------------------------------~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG 210 (229)
T 4dcc_A 172 -----------------------------------------AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELG 210 (229)
T ss_dssp -----------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTT
T ss_pred -----------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcC
Confidence 799999999999999999999999999999999999999
Q ss_pred CeEEEecCCCC
Q 036723 234 LHTVWVGTSHR 244 (290)
Q Consensus 234 i~~i~v~~~~~ 244 (290)
+.+++++++..
T Consensus 211 ~~~i~v~~~~~ 221 (229)
T 4dcc_A 211 ISTYTPKAGED 221 (229)
T ss_dssp CEEECCCTTCC
T ss_pred CEEEEECCHHH
Confidence 99999988764
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-22 Score=173.69 Aligned_cols=115 Identities=8% Similarity=0.146 Sum_probs=97.6
Q ss_pred CCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhc-----------CCCCcceeEEeeccc-CCCCCCcccccccccc
Q 036723 98 MLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRL-----------GLEDCFERIISFETL-NSTDKGTVLVDQDASE 165 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~-----------gl~~~f~~i~~~~~~-~~~~~~~~~~~~~~~~ 165 (290)
...++||+.++|+. +++++|+||+++..+...++++ ++..+|+.++.+. + +
T Consensus 123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~-~~g--------------- 185 (253)
T 2g80_A 123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-TSG--------------- 185 (253)
T ss_dssp CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHH-HHC---------------
T ss_pred cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeee-ccC---------------
Confidence 46889999999999 9999999999999999998876 4667777776542 2 2
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR- 244 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~- 244 (290)
+||+|+.|+.+++++|++|++|++|||+.+|+.+|+++|+.++++.++..
T Consensus 186 -----------------------------~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~ 236 (253)
T 2g80_A 186 -----------------------------KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNA 236 (253)
T ss_dssp -----------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSC
T ss_pred -----------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCC
Confidence 59999999999999999999999999999999999999999999976322
Q ss_pred ---CCCcceeecCHhHH
Q 036723 245 ---AEGVDYALESIHNI 258 (290)
Q Consensus 245 ---~~~ad~v~~sl~el 258 (290)
...++++++++.||
T Consensus 237 ~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 237 PVPDGQKYQVYKNFETL 253 (253)
T ss_dssp CCCSSCCSCEESCSTTC
T ss_pred CcccccCCCccCChhhC
Confidence 12377888888764
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=171.12 Aligned_cols=124 Identities=14% Similarity=0.168 Sum_probs=104.8
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
....++||+.++|+.|+ ++++|+||.........+ + .+|+.++++++...
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~---------------------- 85 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTA---------------------- 85 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSS----------------------
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCC----------------------
Confidence 34578899999999995 889999999887774433 2 46788998887664
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHhcCCeEEEecCCCC--------
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-------- 244 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-------- 244 (290)
+||+|++|..+++++|+.+ ++|++|||+.+|+++|+++|+.+|++.++..
T Consensus 86 ---------------------~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~ 144 (196)
T 2oda_A 86 ---------------------GWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQ 144 (196)
T ss_dssp ---------------------CTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHH
T ss_pred ---------------------CCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHH
Confidence 7999999999999999975 8999999999999999999999999988753
Q ss_pred ---------------------CCCcceeecCHhHHHHHhHHHHHh
Q 036723 245 ---------------------AEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 245 ---------------------~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
..+|+++++++.||.++|..+.+.
T Consensus 145 ~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~~~~~ 189 (196)
T 2oda_A 145 WQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLADIALR 189 (196)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHHHH
T ss_pred hhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHHHHHHH
Confidence 246899999999999988876553
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=179.23 Aligned_cols=191 Identities=16% Similarity=0.159 Sum_probs=134.8
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcC-CCcccHHHHHHHHHHHHcccHHHH-HHcC-CCCCHH---HH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLC-IEEAKVPELCVSLYKFYGTTLAGL-RAIG-YQFDCD---DF 86 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~~~g~~~~~~-~~~~-~~~~~~---~~ 86 (290)
|++|+|+||+||||+++...+...+.+ ....+| .+... .+....|...... .... ...... .+
T Consensus 33 m~ik~iifDlDGTLlds~~~~~~~~~~-----~~~~~g~~~~~~------~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 101 (275)
T 2qlt_A 33 LKINAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAEH------VIHISHGWRTYDAIAKFAPDFADEEYVNKL 101 (275)
T ss_dssp EEESEEEECCBTTTEECHHHHHHHHHH-----HHTTCTTCCHHH------HHHHCTTCCHHHHHHHHCGGGCCHHHHHHH
T ss_pred ccCCEEEECCCCCCCCCHHHHHHHHHH-----HHHHcCCCCHHH------HHHHhcCCCHHHHHHHHhccCCcHHHHHHH
Confidence 458999999999999976665555542 344455 22111 1111123322211 1111 011111 11
Q ss_pred HHHHhhcCCCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 87 HSYVHGRLPYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 87 ~~~~~~~~~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
...+.+.. .....+.|++.++|+.|+ ++++++|++....+...++.+++. .|+.++++++...
T Consensus 102 ~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~----------- 168 (275)
T 2qlt_A 102 EGEIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQ----------- 168 (275)
T ss_dssp HHTHHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSS-----------
T ss_pred HHHHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCC-----------
Confidence 12222211 244678899999988774 568999999999999999999986 4888888877654
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCC-------CCCcEEEEcCCccchHHHHhcCCe
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANI-------NPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~-------~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
+||+|++++.+++++|+ ++++|++|||+.||++||+.+|+.
T Consensus 169 --------------------------------~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~ 216 (275)
T 2qlt_A 169 --------------------------------GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCK 216 (275)
T ss_dssp --------------------------------CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCE
T ss_pred --------------------------------CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCE
Confidence 79999999999999999 999999999999999999999999
Q ss_pred EEEecCCCC-----CCCcceeecCHhHHH
Q 036723 236 TVWVGTSHR-----AEGVDYALESIHNIK 259 (290)
Q Consensus 236 ~i~v~~~~~-----~~~ad~v~~sl~el~ 259 (290)
++++.++.. ...|+++++++.||.
T Consensus 217 ~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 217 IVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp EEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred EEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 999988754 346899999998875
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=170.22 Aligned_cols=102 Identities=23% Similarity=0.351 Sum_probs=93.7
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHh------cCCCCcceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSR------LGLEDCFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~------~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
..++|++.++|+.|+ ++++++||+........++. +++..+|+.+++++..+.
T Consensus 88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~------------------- 148 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGK------------------- 148 (211)
T ss_dssp EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTC-------------------
T ss_pred cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCC-------------------
Confidence 467899999999886 78999999999999999988 899999999999887765
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++++.+++++|++|++|++|||+.+|+++|+.+|+.+++++++.
T Consensus 149 ------------------------~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 149 ------------------------YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp ------------------------CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred ------------------------CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 7999999999999999999999999999999999999999999998764
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=161.89 Aligned_cols=174 Identities=14% Similarity=0.161 Sum_probs=121.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH-cCCCCC-HHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA-IGYQFD-CDDFHSYV 90 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~~~~ 90 (290)
|++|+|+||+||||+++...+...+.+ ...++|.+.... .+...+ .+.....+.. .+.... ...+...+
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHD-SVYQAL---KVSTPFAIETFAPNLENFLEKYKENE 74 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-HHHHHH---HHCHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHH-HHHHHH---ccccHHHHHHHhhhHHHHHHHHHHHH
Confidence 458999999999999965555555553 344556654321 111111 0111111111 111101 12222323
Q ss_pred hhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCC
Q 036723 91 HGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESE 167 (290)
Q Consensus 91 ~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~ 167 (290)
.+... .. .++|++.++|+.|+ ++++++||... .....++.+++..+|+.++++++...
T Consensus 75 ~~~~~-~~-~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~---------------- 135 (190)
T 2fi1_A 75 ARELE-HP-ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFK---------------- 135 (190)
T ss_dssp HHHTT-SC-CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCC----------------
T ss_pred HHhcC-cC-ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCC----------------
Confidence 23222 22 38899999998885 78999998764 67788999999999999999887664
Q ss_pred CCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 168 RPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||++.+++.+++++|++ +|++|||+.+|+++|+.+|+.+++++++.
T Consensus 136 ---------------------------~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 136 ---------------------------RKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp ---------------------------CTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred ---------------------------CCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence 799999999999999998 99999999999999999999999997654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=163.11 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=101.3
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEe-----ecccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIIS-----FETLNSTDK 154 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~-----~~~~~~~~~ 154 (290)
.+.++||+.++|+.|+ ++++++||++. ..+...++.+| .+|+.++. ++....
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~--- 99 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCAC--- 99 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSS---
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCC---
Confidence 3577899999999885 88999999986 56677788888 44666553 233332
Q ss_pred CccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 155 GTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++|+
T Consensus 100 ----------------------------------------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~ 139 (179)
T 3l8h_A 100 ----------------------------------------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGC 139 (179)
T ss_dssp ----------------------------------------STTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTC
T ss_pred ----------------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 7999999999999999999999999999999999999999
Q ss_pred eEEEecCCCC--------CCCcceeecCHhHHHHHhH
Q 036723 235 HTVWVGTSHR--------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 235 ~~i~v~~~~~--------~~~ad~v~~sl~el~~~l~ 263 (290)
.++++.++.. ...|+++++++.||.++|.
T Consensus 140 ~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 140 APWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp EEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred cEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 9999998863 2568999999999998774
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-22 Score=166.96 Aligned_cols=123 Identities=13% Similarity=0.119 Sum_probs=97.4
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
..+.|++.++|+.|+ ++++++||+....+...++.+|+..+|+.+++.++....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~----------------------- 130 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALN----------------------- 130 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-----------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEE-----------------------
Confidence 678999999999885 679999999999999999999999999998765531100
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~s 254 (290)
+.++ ... ..+||++.+++.+++++|++|++|++|||+.+|+++|+.+|+.+++......+..|++++++
T Consensus 131 -~~~~-----~~~----~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 131 -GLVT-----GHM----MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQHATHCINE 199 (217)
T ss_dssp -EEEE-----ESC----CSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTTCSEEECS
T ss_pred -eeec-----cCC----CCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHhcceeecc
Confidence 0000 000 02799999999999999999999999999999999999999998872222225678999876
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-22 Score=165.62 Aligned_cols=102 Identities=23% Similarity=0.415 Sum_probs=91.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHh-cCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSR-LGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++|++.++|+.|+ ++++++||++.......+.. +|+..+|+.+++++..+.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~----------------------- 146 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM----------------------- 146 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC-----------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCC-----------------------
Confidence 577899999999885 78999999988877766666 788888999999887664
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++++.+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.
T Consensus 147 --------------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 147 --------------------RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp --------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred --------------------CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 7999999999999999999999999999999999999999999998764
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-21 Score=167.77 Aligned_cols=196 Identities=21% Similarity=0.203 Sum_probs=130.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccH-HHHHHHHHHHHccc--HHHHHHc----CCCCCHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKV-PELCVSLYKFYGTT--LAGLRAI----GYQFDCDD 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~g~~--~~~~~~~----~~~~~~~~ 85 (290)
.++|+|+||+||||+|+...+..++.+. +..+|.+.... ......+....|.. ...+... ......+.
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHM-----MREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLL 83 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHH-----HHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGG
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHH-----HHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHH
Confidence 4588999999999999666665555533 33344432210 00012222222322 1111111 01111222
Q ss_pred HHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccc
Q 036723 86 FHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 86 ~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
+.+.+.... ....++||+.++|+.|+ .+++|+||++...+...++++|+..+|+.++..
T Consensus 84 ~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~----------------- 144 (231)
T 2p11_A 84 MSSFLIDYP--FASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLI----------------- 144 (231)
T ss_dssp GHHHHHHCC--GGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE-----------------
T ss_pred HHHHHHHHH--HhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe-----------------
Confidence 333333222 34688999999999885 379999999999999999999998888765542
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCcc---chHHHHhcCCeEEEec
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIR---NLETGKRLGLHTVWVG 240 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~---Di~~a~~aGi~~i~v~ 240 (290)
+++++..++.+++ +++|++|++|||+.+ |+.+|+++|+.++++.
T Consensus 145 -------------------------------~~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~ 191 (231)
T 2p11_A 145 -------------------------------YIHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR 191 (231)
T ss_dssp -------------------------------ESSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC
T ss_pred -------------------------------cCChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC
Confidence 2344577777776 789999999999999 9999999999999998
Q ss_pred CCCC--------CC-CcceeecCHhHHHHHhHHH
Q 036723 241 TSHR--------AE-GVDYALESIHNIKEALPEL 265 (290)
Q Consensus 241 ~~~~--------~~-~ad~v~~sl~el~~~l~~~ 265 (290)
++.. .. .++++++++.||.++|.++
T Consensus 192 ~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~~ 225 (231)
T 2p11_A 192 QGHYAFDPKEISSHPPADVTVERIGDLVEMDAEW 225 (231)
T ss_dssp CSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGGG
T ss_pred CCCCCCcchhccccCCCceeecCHHHHHHHHHHH
Confidence 8732 12 4899999999998877653
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-21 Score=166.53 Aligned_cols=203 Identities=13% Similarity=0.148 Sum_probs=125.9
Q ss_pred CcccccccccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-HHHH-c-C
Q 036723 2 EYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-GLRA-I-G 78 (290)
Q Consensus 2 ~~~~~~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-~~~~-~-~ 78 (290)
....++.+ +++++|+|+||+||||+|+. .+. .+...+|.+......... .... ..... .+.. . .
T Consensus 2 ~~~~~m~~-~~~~~k~viFD~DGTLvd~~-~~~---------~~~~~~g~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 68 (225)
T 1nnl_A 2 ISHSELRK-LFYSADAVCFDVDSTVIREE-GID---------ELAKICGVEDAVSEMTRR-AMGG-AVPFKAALTERLAL 68 (225)
T ss_dssp ---CHHHH-HHHHCSEEEEETBTTTBSSC-HHH---------HHHHHTTCTTTC--------------CHHHHHHHHHHH
T ss_pred CcHHHHHH-HHhhCCEEEEeCcccccccc-cHH---------HHHHHhCCcHHHHHHHHH-HHcC-CccHHHHHHHHHHH
Confidence 33444333 34568999999999999953 221 245556654321111000 0000 00000 0000 0 0
Q ss_pred CCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC--CcceeEEee-------
Q 036723 79 YQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE--DCFERIISF------- 146 (290)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~------- 146 (290)
.....+.+.+.+.. ...+++||+.++|+.|+ ++++|+||+....+...++++|+. .+|+.++..
T Consensus 69 ~~~~~~~~~~~~~~----~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~ 144 (225)
T 1nnl_A 69 IQPSREQVQRLIAE----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYA 144 (225)
T ss_dssp HCCCHHHHHHHHHH----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEE
T ss_pred hcCCHHHHHHHHHh----ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEe
Confidence 01123333333322 24678999999999885 789999999999999999999997 478776422
Q ss_pred -cccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 036723 147 -ETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN 225 (290)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~D 225 (290)
.+.... . ...+|||+.++.+++++|+ ++|++|||+.+|
T Consensus 145 ~~~~~~~----------------------~-----------------~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~D 183 (225)
T 1nnl_A 145 GFDETQP----------------------T-----------------AESGGKGKVIKLLKEKFHF--KKIIMIGDGATD 183 (225)
T ss_dssp EECTTSG----------------------G-----------------GSTTHHHHHHHHHHHHHCC--SCEEEEESSHHH
T ss_pred cCCCCCc----------------------c-----------------cCCCchHHHHHHHHHHcCC--CcEEEEeCcHHh
Confidence 111100 0 0036788999999999998 789999999999
Q ss_pred hHHHHhcCCeEEEecCCCC----CCCcceeecCHhHHHHHhH
Q 036723 226 LETGKRLGLHTVWVGTSHR----AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 226 i~~a~~aGi~~i~v~~~~~----~~~ad~v~~sl~el~~~l~ 263 (290)
+.+|+++|+ +++++.... ...++++++++.||.++|.
T Consensus 184 i~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 184 MEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGELE 224 (225)
T ss_dssp HTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC---
T ss_pred HHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHHHh
Confidence 999999999 888865432 2358999999999877653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-21 Score=162.41 Aligned_cols=133 Identities=14% Similarity=0.155 Sum_probs=103.5
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCc---------------hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNAD---------------KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~---------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
..++||+.++|+.|+ ++++++||+. ...+...++.+|+. |+.++.+......
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~-------- 118 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG-------- 118 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC--------
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCC--------
Confidence 567899999998885 7899999998 47788889999987 7776543321000
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE-EEe
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT-VWV 239 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~-i~v 239 (290)
.. +...+.+ ..+||+|.+|+.+++++|+++++|++|||+.+|+.+|+++|+.+ +++
T Consensus 119 -----------~~--------~~~~~~~----~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v 175 (211)
T 2gmw_A 119 -----------SV--------EEFRQVC----DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLV 175 (211)
T ss_dssp -----------SS--------GGGBSCC----SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred -----------cc--------cccCccC----cCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEE
Confidence 00 0000001 13799999999999999999999999999999999999999999 999
Q ss_pred cCCCC-----CCCcceeecCHhHHHHHhHH
Q 036723 240 GTSHR-----AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 240 ~~~~~-----~~~ad~v~~sl~el~~~l~~ 264 (290)
.++.. ...|+++++++.||.++|..
T Consensus 176 ~~g~~~~~~~~~~~d~vi~~l~el~~~l~~ 205 (211)
T 2gmw_A 176 RTGKPITPEAENAADWVLNSLADLPQAIKK 205 (211)
T ss_dssp SSSSCCCHHHHHHCSEEESCGGGHHHHHHC
T ss_pred ecCCCccccccCCCCEEeCCHHHHHHHHHh
Confidence 88753 23589999999999987765
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-20 Score=158.77 Aligned_cols=129 Identities=11% Similarity=0.057 Sum_probs=102.0
Q ss_pred CCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcc-eeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCF-ERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..+.++||+.++|+.|+ ++++++||+....+...++++|+..+| +.++++++....+
T Consensus 66 ~~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~-------------------- 125 (206)
T 1rku_A 66 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVG-------------------- 125 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEE--------------------
T ss_pred HhcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEe--------------------
Confidence 34678999999999886 789999999999999999999999999 4566654432100
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCccee
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYA 251 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v 251 (290)
.-+|+|..+..++++++.++++|++|||+.+|+.+|+.+|+.+++ ..... ...++++
T Consensus 126 --------------------~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~~~~~~~~~~~ 184 (206)
T 1rku_A 126 --------------------YQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFP 184 (206)
T ss_dssp --------------------EECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSC
T ss_pred --------------------eecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CCcHHHHHHHhhhc
Confidence 014888999999999999999999999999999999999998664 32221 2345665
Q ss_pred -ecCHhHHHHHhHHHH
Q 036723 252 -LESIHNIKEALPELW 266 (290)
Q Consensus 252 -~~sl~el~~~l~~~~ 266 (290)
++++.++.++|.+++
T Consensus 185 ~~~~~~~l~~~l~~~~ 200 (206)
T 1rku_A 185 AVHTYEDLKREFLKAS 200 (206)
T ss_dssp EECSHHHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHh
Confidence 899999999887653
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-22 Score=171.49 Aligned_cols=121 Identities=13% Similarity=0.127 Sum_probs=96.2
Q ss_pred CCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcce---eEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 100 KPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFE---RIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 100 ~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.++|++.++++.|+ .++ ++||.+.......+..+++..+|+ .+++++.+..
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 177 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVV----------------------- 177 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEEC-----------------------
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEe-----------------------
Confidence 36788888887764 556 888887665555566667777665 3444444433
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------C
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------A 245 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~ 245 (290)
+||+|.+|+.+++++|++|++|++|||+. +|+.+|+.+|+.++++.++.. .
T Consensus 178 --------------------~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ 237 (259)
T 2ho4_A 178 --------------------GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKIN 237 (259)
T ss_dssp --------------------STTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSS
T ss_pred --------------------cCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccC
Confidence 79999999999999999999999999999 999999999999999988731 3
Q ss_pred CCcceeecCHhHHHHHhHH
Q 036723 246 EGVDYALESIHNIKEALPE 264 (290)
Q Consensus 246 ~~ad~v~~sl~el~~~l~~ 264 (290)
..|+++++++.|+.+++.+
T Consensus 238 ~~~~~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 238 PPPYLTCESFPHAVDHILQ 256 (259)
T ss_dssp SCCSEEESCHHHHHHHHHH
T ss_pred CCCCEEECCHHHHHHHHHH
Confidence 5689999999999887654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-22 Score=173.42 Aligned_cols=65 Identities=17% Similarity=0.216 Sum_probs=58.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHhcCCeEEEecCCCC-----C---CCcceeecCHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDS-IRNLETGKRLGLHTVWVGTSHR-----A---EGVDYALESIHNIK 259 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs-~~Di~~a~~aGi~~i~v~~~~~-----~---~~ad~v~~sl~el~ 259 (290)
+||++.+++.+++++|+++++|++|||+ .||++||+.+|+.++++.++.. . ..|+++++++.||.
T Consensus 175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence 7999999999999999999999999999 6999999999999999987643 1 47999999998874
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=151.48 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=93.8
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
..+.|++.++|+.++ ++++++|+.........++.+++..+|+..+...+....
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 131 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLT----------------------- 131 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-----------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEc-----------------------
Confidence 355689999998875 678999999888888888899987777654433210000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCcceeecC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYALES 254 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v~~s 254 (290)
+.... .. ..+++++..+..+++++|+++++|++|||+.||++||+.+|+.++ ++... ....|++++.+
T Consensus 132 -~~~~~----~~-----~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~-~~~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 132 -GDVEG----EV-----LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA-FCAKPILKEKADICIEK 200 (211)
T ss_dssp -EEEEC----SS-----CSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-ESCCHHHHTTCSEEECS
T ss_pred -CCccc----Cc-----cCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-ECCCHHHHhhcceeecc
Confidence 00000 00 014677899999999999999999999999999999999999754 44222 24568999988
Q ss_pred --HhHHHHHh
Q 036723 255 --IHNIKEAL 262 (290)
Q Consensus 255 --l~el~~~l 262 (290)
+.+|.+++
T Consensus 201 ~~~~~l~~~l 210 (211)
T 1l7m_A 201 RDLREILKYI 210 (211)
T ss_dssp SCGGGGGGGC
T ss_pred hhHHHHHHhh
Confidence 88886643
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.80 E-value=8.4e-20 Score=151.38 Aligned_cols=121 Identities=15% Similarity=0.134 Sum_probs=92.8
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
....+.|++.++|+.|+ ++++++||+........ +.+|+..+++.+...+.....
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------------------- 133 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQG--------------------- 133 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEE---------------------
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceEC---------------------
Confidence 34588999999999885 78999999998888888 889988776666554432210
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeec
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALE 253 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~ 253 (290)
.+|.+.....+++++ ++++|++|||+.+|++||+.+|+. ++++++.. .++++++
T Consensus 134 ---------------------~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~--~ad~v~~ 187 (201)
T 4ap9_A 134 ---------------------IRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMG-IAVGREIP--GADLLVK 187 (201)
T ss_dssp ---------------------EECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT--TCSEEES
T ss_pred ---------------------CcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc--cccEEEc
Confidence 133333344556666 899999999999999999999997 55655554 8999999
Q ss_pred CHhHHHHHhHHH
Q 036723 254 SIHNIKEALPEL 265 (290)
Q Consensus 254 sl~el~~~l~~~ 265 (290)
+++||.++|.++
T Consensus 188 ~~~el~~~l~~l 199 (201)
T 4ap9_A 188 DLKELVDFIKNL 199 (201)
T ss_dssp SHHHHHHHHHTC
T ss_pred cHHHHHHHHHHh
Confidence 999999888654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-20 Score=166.06 Aligned_cols=131 Identities=14% Similarity=0.164 Sum_probs=99.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+.++||+.++|+.|+ ++++++||+....+..+++++|+..+|+.++..++....
T Consensus 177 ~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~t---------------------- 234 (317)
T 4eze_A 177 RMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLT---------------------- 234 (317)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEE----------------------
T ss_pred CCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeee----------------------
Confidence 3578999999999885 889999999999999999999999999987765431100
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCccee--
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYA-- 251 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v-- 251 (290)
+.++ .+...+||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.+++ +... ....++.+
T Consensus 235 --g~i~---------~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~ 302 (317)
T 4eze_A 235 --DNIT---------LPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQIN 302 (317)
T ss_dssp --EEEC---------SSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEES
T ss_pred --eeEe---------cccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeC
Confidence 0000 0001269999999999999999999999999999999999999998777 3222 13334444
Q ss_pred ecCHhHHHHHh
Q 036723 252 LESIHNIKEAL 262 (290)
Q Consensus 252 ~~sl~el~~~l 262 (290)
.+++.++.++|
T Consensus 303 ~~~L~~ll~~L 313 (317)
T 4eze_A 303 YHGFELLLFLI 313 (317)
T ss_dssp SSCGGGGGGGT
T ss_pred CCCHHHHHHHH
Confidence 44777776655
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.6e-20 Score=173.81 Aligned_cols=102 Identities=24% Similarity=0.347 Sum_probs=86.1
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCC--chHHHHHHHHhc--CCCCcceeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNA--DKTHAARVLSRL--GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~--~~~~~~~~l~~~--gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
..++||+.++|+.|+ ++++|+||+ ........+... ++..+|+.++++++++.
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~-------------------- 158 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM-------------------- 158 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC--------------------
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCC--------------------
Confidence 578999999999885 889999998 222222223333 67788999999998876
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++|+.++++.++.
T Consensus 159 -----------------------~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~ 207 (555)
T 3i28_A 159 -----------------------VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTD 207 (555)
T ss_dssp -----------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred -----------------------CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence 7999999999999999999999999999999999999999999997654
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-21 Score=167.76 Aligned_cols=119 Identities=14% Similarity=0.141 Sum_probs=90.6
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHH--HHH-HHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTH--AAR-VLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~--~~~-~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
...++|++.++|+.|+ .++ ++||.+... ... .....++..+|+.+++++..+.
T Consensus 124 ~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------------- 181 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI--------------------- 181 (264)
T ss_dssp TTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEC---------------------
T ss_pred CCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCcccc---------------------
Confidence 4567899999988775 444 888876632 111 1222234556777666655443
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC-----C-
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR-----A- 245 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~-----~- 245 (290)
+||+|.+|+.+++++|++|++|++|||++ +|+.+|+++|+.++++.++.. .
T Consensus 182 ----------------------~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~ 239 (264)
T 1yv9_A 182 ----------------------GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPT 239 (264)
T ss_dssp ----------------------STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTT
T ss_pred ----------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHh
Confidence 79999999999999999999999999995 999999999999999987653 1
Q ss_pred --CCcceeecCHhHHHH
Q 036723 246 --EGVDYALESIHNIKE 260 (290)
Q Consensus 246 --~~ad~v~~sl~el~~ 260 (290)
..|+++++++.|+.+
T Consensus 240 ~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 240 LPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp CSSCCSEEESSGGGCCT
T ss_pred cCCCCCEEEecHHHHhh
Confidence 169999999988653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-20 Score=157.61 Aligned_cols=133 Identities=14% Similarity=0.097 Sum_probs=100.3
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...++||+.++|+.|+ ++++|+||+....+...++ ++..+ +.+++++.....++ +.
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~------------------~~ 133 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDY------------------IH 133 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSB------------------CE
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCc------------------eE
Confidence 4678999999999986 8899999999999988888 77665 88888775442100 00
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHH-HH-------HHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEA-FE-------QVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~-~~-------~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
+ ...||+|.. ++ .++++++++++++++|||+.+|+.+|+++|+.++..+....
T Consensus 134 --~---------------~~~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~ 196 (236)
T 2fea_A 134 --I---------------DWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECR 196 (236)
T ss_dssp --E---------------ECTTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHH
T ss_pred --E---------------ecCCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHH
Confidence 0 014777773 44 78899999999999999999999999999998874221111
Q ss_pred CCC-cceeecCHhHHHHHhHHHHHh
Q 036723 245 AEG-VDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 245 ~~~-ad~v~~sl~el~~~l~~~~~~ 268 (290)
..+ +++++.++.||.++|.++++.
T Consensus 197 ~~~~~~~~~~~~~el~~~l~~~~~~ 221 (236)
T 2fea_A 197 EQNLNHLPYQDFYEIRKEIENVKEV 221 (236)
T ss_dssp HTTCCEECCSSHHHHHHHHHTSHHH
T ss_pred HCCCCeeecCCHHHHHHHHHHhHHH
Confidence 233 889999999999998887443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-19 Score=153.89 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=103.3
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
..++||+.++|+.|+ ++++++||+.. ..+...++.+|+. |+.++.+.... . +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~-~-g------ 124 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHE-A-G------ 124 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCT-T-C------
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCC-C-C------
Confidence 467899999998885 88999999988 6888889999875 55544321100 0 0
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE-EEe
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT-VWV 239 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~-i~v 239 (290)
.+. ...+.. ..+||+|.+|+.+++++|++|+++++|||+.+|+.+|+++|+.+ +++
T Consensus 125 -----------------~~~--~~~~~~----~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v 181 (218)
T 2o2x_A 125 -----------------VGP--LAIPDH----PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 181 (218)
T ss_dssp -----------------CST--TCCSSC----TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred -----------------cee--ecccCC----ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEE
Confidence 000 000111 13799999999999999999999999999999999999999999 999
Q ss_pred cCCCC-----CCCcceeecCHhHHHHHhHHHH
Q 036723 240 GTSHR-----AEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 240 ~~~~~-----~~~ad~v~~sl~el~~~l~~~~ 266 (290)
.++.. ...|+++++++.||.+++.+++
T Consensus 182 ~~g~~~~~~~~~~~~~~i~~l~el~~~l~~~~ 213 (218)
T 2o2x_A 182 DGEAAVQPGFAIRPLRDSSELGDLLAAIETLG 213 (218)
T ss_dssp TCCCEEETTEEEEEESSHHHHHHHHHHHHHTC
T ss_pred ecCCCCcccccCCCCEecccHHHHHHHHHHHh
Confidence 88753 2368899999999998877653
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7e-21 Score=166.69 Aligned_cols=68 Identities=15% Similarity=0.303 Sum_probs=62.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCCC--------CCcceeecCHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHRA--------EGVDYALESIHNIKEAL 262 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~~--------~~ad~v~~sl~el~~~l 262 (290)
+||++.+++.+++++|++|++|++|||+. ||++||+.+|+.++++.++... ..|+++++++.||.++|
T Consensus 194 ~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 194 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 79999999999999999999999999995 9999999999999999887541 37999999999998764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-19 Score=151.15 Aligned_cols=126 Identities=11% Similarity=0.122 Sum_probs=91.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC--CcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE--DCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..+.|++.++++.|+ ++++++||+....+...++.+|+. .+|...+.....+. +.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~ 140 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS--------------------FK 140 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB--------------------EE
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc--------------------ee
Confidence 357799999998885 789999999999999999999984 35543222111100 00
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHH-HHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC------CC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEE-AFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR------AE 246 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~-~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~------~~ 246 (290)
.+. ..||++. .++.+.+.+|+++++|++|||+.+|++|+ ++|+.+++++.+.. ..
T Consensus 141 ~~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~ 202 (219)
T 3kd3_A 141 ELD-----------------NSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVIN 202 (219)
T ss_dssp EEE-----------------CTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHH
T ss_pred ccC-----------------CCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHh
Confidence 000 0355544 44555566799999999999999999999 58999887765432 34
Q ss_pred CcceeecCHhHHHHHh
Q 036723 247 GVDYALESIHNIKEAL 262 (290)
Q Consensus 247 ~ad~v~~sl~el~~~l 262 (290)
.|+++++++.||.++|
T Consensus 203 ~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 203 LSKYVARNVAELASLI 218 (219)
T ss_dssp HCSEEESSHHHHHHHH
T ss_pred hcceeeCCHHHHHHhh
Confidence 5899999999998865
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-19 Score=165.43 Aligned_cols=131 Identities=14% Similarity=0.064 Sum_probs=98.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
++++||+.++|+.|+ ++++++||+....+..+++++|+..+|+..+...+....
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~t----------------------- 311 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLT----------------------- 311 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEE-----------------------
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEE-----------------------
Confidence 478899999998885 889999999999999999999998888765433211000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeec--
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALE-- 253 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~-- 253 (290)
+.++ .....+||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.+++...+.....+++++.
T Consensus 312 -g~~~---------~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~~~~~ad~~i~~~ 381 (415)
T 3p96_A 312 -GRVV---------GPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVADASLSHP 381 (415)
T ss_dssp -EEEC---------SSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCSEEECSS
T ss_pred -eeEc---------cCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEECCCHHHHHhCCEEEccC
Confidence 0000 0001179999999999999999999999999999999999999998887222222445777754
Q ss_pred CHhHHHHHh
Q 036723 254 SIHNIKEAL 262 (290)
Q Consensus 254 sl~el~~~l 262 (290)
++.++..++
T Consensus 382 ~l~~ll~~l 390 (415)
T 3p96_A 382 YLDTVLFLL 390 (415)
T ss_dssp CTTHHHHHT
T ss_pred CHHHHHHHh
Confidence 566766654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-18 Score=143.24 Aligned_cols=99 Identities=19% Similarity=0.241 Sum_probs=89.2
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCc-hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNAD-KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
....+.|++.++|+.|+ ++++++||++ ...+...++.+|+..+|+.++..
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~-------------------------- 118 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY-------------------------- 118 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES--------------------------
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE--------------------------
Confidence 34678899999999885 8899999998 68999999999999999987543
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.+|++..|+.+++++|++|++|++|||+.+|+++|+++|+.++++.++.
T Consensus 119 ----------------------~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~ 167 (187)
T 2wm8_A 119 ----------------------PGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGM 167 (187)
T ss_dssp ----------------------SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSC
T ss_pred ----------------------eCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCC
Confidence 3677899999999999999999999999999999999999999998876
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.2e-18 Score=144.59 Aligned_cols=107 Identities=9% Similarity=0.020 Sum_probs=83.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.++||+.++|+.|+ ++++|+||+....++.+++.+|+..+|...+...+-...++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~---------------------- 149 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGR---------------------- 149 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEE----------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeee----------------------
Confidence 56999999999885 78999999999999999999999877665443321100000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC---CCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN---INPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~---~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
...+...+++++..++.+++++| +++++|++||||.+|+.+++.+|+.++..
T Consensus 150 -----------~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 150 -----------IEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp -----------EESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred -----------ecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 00011126788999999999999 99999999999999999999999876653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-19 Score=145.96 Aligned_cols=115 Identities=14% Similarity=0.166 Sum_probs=90.1
Q ss_pred hhHHHHHHcC---CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccC
Q 036723 103 PVLRNLLLSL---PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYC 179 (290)
Q Consensus 103 pg~~~~L~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
|+..++|+.| +++++++||.+...+...++++|+..+|+.
T Consensus 39 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~------------------------------------- 81 (162)
T 2p9j_A 39 VLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG------------------------------------- 81 (162)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC-------------------------------------
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC-------------------------------------
Confidence 3344555544 488999999999999999999998766531
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-CCCcceeecCHhH-
Q 036723 180 SRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-AEGVDYALESIHN- 257 (290)
Q Consensus 180 ~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~~~ad~v~~sl~e- 257 (290)
+||++..++.++++++++++++++|||+.+|+.+|+.+|+.+++...... ...+++++.++.+
T Consensus 82 ---------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~ 146 (162)
T 2p9j_A 82 ---------------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGE 146 (162)
T ss_dssp ---------------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSS
T ss_pred ---------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCC
Confidence 49999999999999999999999999999999999999998775432211 3458999999876
Q ss_pred --HHHHhHHHHHhh
Q 036723 258 --IKEALPELWEVA 269 (290)
Q Consensus 258 --l~~~l~~~~~~~ 269 (290)
+.+++..++...
T Consensus 147 g~~~~~~~~~~~~~ 160 (162)
T 2p9j_A 147 GALREVAELIHFLK 160 (162)
T ss_dssp SHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHhc
Confidence 667777777654
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.9e-19 Score=139.13 Aligned_cols=96 Identities=25% Similarity=0.318 Sum_probs=84.1
Q ss_pred hHHHHHHcC---CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCC
Q 036723 104 VLRNLLLSL---PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180 (290)
Q Consensus 104 g~~~~L~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (290)
++.++|+.| +++++++||++...+...++.+|+..+|+.++++++...
T Consensus 22 ~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------------------- 72 (137)
T 2pr7_A 22 RWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGV----------------------------- 72 (137)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSC-----------------------------
T ss_pred cHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCC-----------------------------
Confidence 444444444 478999999999988889999999999999999887664
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 181 ~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+++.|+.+++++|++|+++++|||+.+|+.+|+++|+.++++.++
T Consensus 73 --------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 73 --------------EKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp --------------CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred --------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence 799999999999999999999999999999999999999999998664
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-19 Score=156.59 Aligned_cols=71 Identities=18% Similarity=0.333 Sum_probs=63.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCC-C-------CCCcceeecCHhHHHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSH-R-------AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~-~-------~~~ad~v~~sl~el~~~l~~~ 265 (290)
+||++.+++.+++++|+++++|++|||+. ||++||+.+|+.++++.++. . ...|+++++++.|+.++|.+.
T Consensus 189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 268 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 268 (271)
T ss_dssp STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHhh
Confidence 79999999999999999999999999999 99999999999999998862 1 145899999999998877553
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-20 Score=165.07 Aligned_cols=124 Identities=24% Similarity=0.248 Sum_probs=95.6
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHH--H-HHHHhcC-CCCcceeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHA--A-RVLSRLG-LEDCFERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~--~-~~l~~~g-l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
...++|++.++++.|+ ..++++||.+.... . ..+..+| +..+|+.+++.+....
T Consensus 154 ~~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-------------------- 213 (306)
T 2oyc_A 154 EHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVV-------------------- 213 (306)
T ss_dssp TTCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEEC--------------------
T ss_pred CCCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceee--------------------
Confidence 3466889999998886 23889998876543 1 2233334 4456666666555443
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCCC-----
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHRA----- 245 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~~----- 245 (290)
+||+|.+|+.+++++|++|++|++|||+. +|+++|+.+|+.++++.++...
T Consensus 214 -----------------------~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~ 270 (306)
T 2oyc_A 214 -----------------------GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQ 270 (306)
T ss_dssp -----------------------STTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHH
T ss_pred -----------------------CCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHH
Confidence 79999999999999999999999999997 9999999999999999887531
Q ss_pred ---------CCcceeecCHhHHHHHhHH
Q 036723 246 ---------EGVDYALESIHNIKEALPE 264 (290)
Q Consensus 246 ---------~~ad~v~~sl~el~~~l~~ 264 (290)
..|+++++++.||.+.+.+
T Consensus 271 ~~~~~~~~~~~pd~vi~~l~el~~~l~~ 298 (306)
T 2oyc_A 271 AYLAAGQHDLVPHYYVESIADLTEGLED 298 (306)
T ss_dssp HHHHTTCGGGSCSEEESSGGGGGGGC--
T ss_pred hhhcccccCCCCCEEECCHHHHHHHHHh
Confidence 3689999999999876643
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.6e-19 Score=154.03 Aligned_cols=121 Identities=18% Similarity=0.175 Sum_probs=93.5
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHH--HHHHHh-cCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHA--ARVLSR-LGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~--~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
...++|++.++++.|+ .++ ++||.+.... ...+.. .++..+|+.+++.+....
T Consensus 128 ~~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~--------------------- 185 (263)
T 1zjj_A 128 PDLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIII--------------------- 185 (263)
T ss_dssp TTCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEEC---------------------
T ss_pred CCCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEe---------------------
Confidence 3567899999988775 445 8899876543 222322 345556777766665443
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC------C
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR------A 245 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~------~ 245 (290)
+||+|.+|+.++++ ++|+++++|||++ +|+.+|+++|+.++++.++.. .
T Consensus 186 ----------------------~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~ 241 (263)
T 1zjj_A 186 ----------------------GKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKK 241 (263)
T ss_dssp ----------------------STTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTT
T ss_pred ----------------------cCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHh
Confidence 79999999999999 9999999999997 999999999999999988753 1
Q ss_pred --CCcceeecCHhHHHHHhHH
Q 036723 246 --EGVDYALESIHNIKEALPE 264 (290)
Q Consensus 246 --~~ad~v~~sl~el~~~l~~ 264 (290)
..|+++++++.||.++|.+
T Consensus 242 ~~~~p~~~~~~l~el~~~l~~ 262 (263)
T 1zjj_A 242 SEYKPDLVLPSVYELIDYLKT 262 (263)
T ss_dssp CSSCCSEEESSGGGGGGGGC-
T ss_pred cCCCCCEEECCHHHHHHHHhh
Confidence 2699999999999887654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=151.56 Aligned_cols=139 Identities=13% Similarity=0.088 Sum_probs=103.6
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+++.||+.++|+.|+ ++++++||+.......+++++|+..+|+..+...+....
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~t---------------------- 233 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLT---------------------- 233 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE----------------------
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeee----------------------
Confidence 3578899999998885 889999999999999999999998888775543211000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCccee--e
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYA--L 252 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v--~ 252 (290)
+.+ ... ...+||++++++.+++++|+++++|++|||+.||+.|++.+|+.+++...+..+..++++ .
T Consensus 234 --g~~-----~~~----~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~~~~a~~v~~~ 302 (335)
T 3n28_A 234 --GQV-----LGE----VVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQTAVRF 302 (335)
T ss_dssp --EEE-----ESC----CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHTTSSEEESS
T ss_pred --eee-----ccc----ccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEEec
Confidence 000 000 012699999999999999999999999999999999999999987772222224445555 4
Q ss_pred cCHhHHHHHhHHHHHhh
Q 036723 253 ESIHNIKEALPELWEVA 269 (290)
Q Consensus 253 ~sl~el~~~l~~~~~~~ 269 (290)
+++.++.++|...+...
T Consensus 303 ~~l~~v~~~L~~~l~~~ 319 (335)
T 3n28_A 303 AGLGGVVCILSAALVAQ 319 (335)
T ss_dssp SCTHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhHHHHh
Confidence 56888888887766544
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-18 Score=143.08 Aligned_cols=101 Identities=15% Similarity=0.303 Sum_probs=84.4
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCC---------------chHHHHHHHHhcCCCCcceeEEee-----cccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNA---------------DKTHAARVLSRLGLEDCFERIISF-----ETLNSTDK 154 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~---------------~~~~~~~~l~~~gl~~~f~~i~~~-----~~~~~~~~ 154 (290)
.+.++||+.++|+.|+ ++++|+||+ ....+...++.+|+. |+.++.+ ++.+.
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~--- 114 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDC--- 114 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSS---
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccc---
Confidence 3577899999999885 789999998 677888899999987 8888654 44443
Q ss_pred CccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 155 GTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
.||+|++|+.+++++|++|++|++|||+.+|+++|+++|+
T Consensus 115 ----------------------------------------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~ 154 (176)
T 2fpr_A 115 ----------------------------------------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGI 154 (176)
T ss_dssp ----------------------------------------STTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTS
T ss_pred ----------------------------------------cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCC
Confidence 7999999999999999999999999999999999999999
Q ss_pred eEEEecCCC
Q 036723 235 HTVWVGTSH 243 (290)
Q Consensus 235 ~~i~v~~~~ 243 (290)
.++++.++.
T Consensus 155 ~~i~v~~~~ 163 (176)
T 2fpr_A 155 NGLRYDRET 163 (176)
T ss_dssp EEEECBTTT
T ss_pred eEEEEcCCc
Confidence 999998875
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.8e-20 Score=161.92 Aligned_cols=114 Identities=22% Similarity=0.229 Sum_probs=89.4
Q ss_pred CChhHHHHHHcCCCcEEEEeCCchHHH--H--HHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 101 PDPVLRNLLLSLPIRKVIFTNADKTHA--A--RVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 101 ~~pg~~~~L~~L~~~~~ivT~~~~~~~--~--~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.++++.+.|+.-+++ +++||.+.... . ..+...++..+|+.+++++.+..
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~------------------------- 202 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRF------------------------- 202 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEE-------------------------
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEe-------------------------
Confidence 344555545454577 99999877655 2 12355567778888887776554
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc----CCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC-----C-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA----NINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR-----A- 245 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~----~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~-----~- 245 (290)
+||+|.+|+.+++++ |++|++|++|||++ +|+.+|+++|+.++++.++.. .
T Consensus 203 ------------------~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~ 264 (284)
T 2hx1_A 203 ------------------GKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAET 264 (284)
T ss_dssp ------------------STTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHH
T ss_pred ------------------cCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHh
Confidence 799999999999999 99999999999996 999999999999999988753 1
Q ss_pred ------CCcceeecCHhHH
Q 036723 246 ------EGVDYALESIHNI 258 (290)
Q Consensus 246 ------~~ad~v~~sl~el 258 (290)
..|+++++++.||
T Consensus 265 ~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 265 KIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp HHHHHTCCCSEEESCSCCC
T ss_pred hhhccCCCCCEEccchhhh
Confidence 4688888887765
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.9e-18 Score=148.74 Aligned_cols=75 Identities=17% Similarity=0.272 Sum_probs=59.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHHhhC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWEVAG 270 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~~~~ 270 (290)
+++|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++.+.++ +.++|.+++...|
T Consensus 195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~-vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~ 273 (279)
T 4dw8_A 195 GIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMG-VAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNVEG 273 (279)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC----
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcE-EEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhccc
Confidence 68899999999999999999999999999999999999975 44444433 5568999988665 8888888776654
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.6e-19 Score=142.37 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=86.8
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+..+++++++||.....+...++++|+..+|+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~------------------------------------------ 76 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG------------------------------------------ 76 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc------------------------------------------
Confidence 45566666799999999999999999999998765532
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-CCCcceeecCHh---HHHH
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-AEGVDYALESIH---NIKE 260 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~~~ad~v~~sl~---el~~ 260 (290)
.||++.+++.+++++|+++++|++|||+.+|+.+|+.+|+.++..+.... ...+++++.+.. .+.+
T Consensus 77 ----------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e 146 (164)
T 3e8m_A 77 ----------VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFRE 146 (164)
T ss_dssp ----------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHH
T ss_pred ----------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHH
Confidence 49999999999999999999999999999999999999997665443222 456889888722 1444
Q ss_pred HhHHHH
Q 036723 261 ALPELW 266 (290)
Q Consensus 261 ~l~~~~ 266 (290)
++..++
T Consensus 147 ~~~~ll 152 (164)
T 3e8m_A 147 FVEKVL 152 (164)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 444444
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-18 Score=151.90 Aligned_cols=69 Identities=19% Similarity=0.289 Sum_probs=61.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHhcCCeEEEecCCCC-----CC---CcceeecCHhHHHHHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDS-IRNLETGKRLGLHTVWVGTSHR-----AE---GVDYALESIHNIKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs-~~Di~~a~~aGi~~i~v~~~~~-----~~---~ad~v~~sl~el~~~l~ 263 (290)
+||++.+++.+++++|++++++++|||+ .||+.||+.+|+.++++.++.. +. .|+++++++.||.+-+.
T Consensus 182 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~ 259 (266)
T 3pdw_A 182 GKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIE 259 (266)
T ss_dssp STTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhh
Confidence 7999999999999999999999999999 6999999999999999997653 22 59999999999987543
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-18 Score=152.45 Aligned_cols=66 Identities=20% Similarity=0.296 Sum_probs=59.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHhcCCeEEEecCCCC------C--CCcceeecCHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDS-IRNLETGKRLGLHTVWVGTSHR------A--EGVDYALESIHNIKE 260 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs-~~Di~~a~~aGi~~i~v~~~~~------~--~~ad~v~~sl~el~~ 260 (290)
+||++.+++.+++++|++++++++|||+ .+|+.||+.+|+.++++.++.. . ..|+++++++.||.+
T Consensus 181 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~~ 255 (264)
T 3epr_A 181 GKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTF 255 (264)
T ss_dssp STTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCCS
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHhc
Confidence 8999999999999999999999999999 5999999999999999988753 1 279999999988753
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.3e-17 Score=143.95 Aligned_cols=83 Identities=12% Similarity=0.115 Sum_probs=65.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHHhhC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWEVAG 270 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~~~~ 270 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. ++++++.. +..|++++.+.++ +.++|.+++...
T Consensus 200 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~- 277 (290)
T 3dnp_A 200 GVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLG-VAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQ- 277 (290)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCE-EEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhc-
Confidence 68899999999999999999999999999999999999985 44444433 5668999999888 999999988766
Q ss_pred CCCCccccc
Q 036723 271 ENSESISYS 279 (290)
Q Consensus 271 ~~~~~~~~~ 279 (290)
.+..++.+.
T Consensus 278 ~~~~~~~~~ 286 (290)
T 3dnp_A 278 QRKGFLDKF 286 (290)
T ss_dssp HHC------
T ss_pred CcccHHhHh
Confidence 444444443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-17 Score=150.64 Aligned_cols=137 Identities=21% Similarity=0.293 Sum_probs=111.9
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcce--eEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFE--RIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
.+.++||+.++|+.|+ ++++|+||+++..+...++++|+..+|+ .++++++....+.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~------------------ 274 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAEN------------------ 274 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHH------------------
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccccc------------------
Confidence 4688999999999985 8899999999999999999999999999 8888876531000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC--------------CCCCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN--------------INPRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~--------------~~~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
..+.-...+||+|+.|..+++++| ++|++|++|||+.+|+.+|+++|+.+|+
T Consensus 275 --------------~~~~~kp~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~ 340 (384)
T 1qyi_A 275 --------------MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIG 340 (384)
T ss_dssp --------------HSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEE
T ss_pred --------------ccccccCCCCCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEE
Confidence 000000016999999999999999 8999999999999999999999999999
Q ss_pred ecCCCC---------CCCcceeecCHhHHHHHhHHHH
Q 036723 239 VGTSHR---------AEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 239 v~~~~~---------~~~ad~v~~sl~el~~~l~~~~ 266 (290)
+.++.. ..+|+++++++.||.+.|...+
T Consensus 341 V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~~~~ 377 (384)
T 1qyi_A 341 TLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLL 377 (384)
T ss_dssp ESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTT
T ss_pred ECCCccccccHHHHhhcCCCEEECCHHHHHHHHHHHH
Confidence 988652 2378999999999998775433
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-18 Score=141.69 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=85.1
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+..+++++++|+.....+..+++.+|+. +| ..
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~----~~-------------------------------------- 83 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VL----HG-------------------------------------- 83 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EE----ES--------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eE----eC--------------------------------------
Confidence 556666667999999999999999999999986 22 21
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC------Hh
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES------IH 256 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s------l~ 256 (290)
.||++..++.+++++|++++++++|||+.+|+.+++.+|+.+++. ++.. ...+++++.+ +.
T Consensus 84 ----------~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~ 152 (176)
T 3mmz_A 84 ----------IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIR 152 (176)
T ss_dssp ----------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHH
T ss_pred ----------CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHH
Confidence 489999999999999999999999999999999999999865543 3332 4568999988 66
Q ss_pred HHHHHh
Q 036723 257 NIKEAL 262 (290)
Q Consensus 257 el~~~l 262 (290)
++.++|
T Consensus 153 ~l~~~l 158 (176)
T 3mmz_A 153 EIASWI 158 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776655
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-17 Score=146.42 Aligned_cols=125 Identities=14% Similarity=0.123 Sum_probs=93.1
Q ss_pred CCChhHHHHHHcC----CCcEEEEeCC---------------------chHHHHHHHHhcCCCCcceeE----------E
Q 036723 100 KPDPVLRNLLLSL----PIRKVIFTNA---------------------DKTHAARVLSRLGLEDCFERI----------I 144 (290)
Q Consensus 100 ~~~pg~~~~L~~L----~~~~~ivT~~---------------------~~~~~~~~l~~~gl~~~f~~i----------~ 144 (290)
.+.+++.++++.+ +.++.+.|+. ....+...++.+|+..+|..+ +
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 5568888888877 4556777765 445566677777876555543 2
Q ss_pred eecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 036723 145 SFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIR 224 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~ 224 (290)
..+.... +++++.+++.+++++|+++++|++|||+.|
T Consensus 202 ~~~~~~~-------------------------------------------~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~ 238 (289)
T 3gyg_A 202 DVDFIPI-------------------------------------------GTGKNEIVTFMLEKYNLNTERAIAFGDSGN 238 (289)
T ss_dssp EEEEEES-------------------------------------------CCSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred EEEEEeC-------------------------------------------CCCHHHHHHHHHHHcCCChhhEEEEcCCHH
Confidence 3332222 799999999999999999999999999999
Q ss_pred chHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHHh
Q 036723 225 NLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWEV 268 (290)
Q Consensus 225 Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~~ 268 (290)
|+.|++.+|+. +.++++.. ...+++++.+..+ +.+.|.+++..
T Consensus 239 D~~~~~~ag~~-~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 239 DVRMLQTVGNG-YLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp GHHHHTTSSEE-EECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCcE-EEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 99999999975 44444443 4458899988776 88888777654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-18 Score=150.57 Aligned_cols=69 Identities=28% Similarity=0.440 Sum_probs=62.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC----CC--------CcceeecCHhHHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----AE--------GVDYALESIHNIKEA 261 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----~~--------~ad~v~~sl~el~~~ 261 (290)
+||++.+++.+++++|++++++++|||++ +|+.+|+.+|+.++++.++.. .. .|+++++++.||.++
T Consensus 186 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~ 265 (268)
T 3qgm_A 186 GKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEA 265 (268)
T ss_dssp STTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHT
T ss_pred CCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHH
Confidence 89999999999999999999999999995 999999999999999988753 11 689999999999987
Q ss_pred hH
Q 036723 262 LP 263 (290)
Q Consensus 262 l~ 263 (290)
|.
T Consensus 266 l~ 267 (268)
T 3qgm_A 266 LE 267 (268)
T ss_dssp C-
T ss_pred Hh
Confidence 63
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-17 Score=136.97 Aligned_cols=106 Identities=13% Similarity=0.202 Sum_probs=85.7
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+..+++++++||.....+..+++++|+..+|+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~----------------------------------------- 92 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR----------------------------------------- 92 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC-----------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc-----------------------------------------
Confidence 556666667999999999999999999999998776532
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC------Hh
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES------IH 256 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s------l~ 256 (290)
++||+.++.+++++|+++++|++|||+.+|+.+++.+|+.++. +.+.. ...+++++.+ +.
T Consensus 93 -----------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~-~~~~~~~~~~ad~v~~~~~~~G~~~ 160 (189)
T 3mn1_A 93 -----------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV-ANAASFVREHAHGITRAQGGEGAAR 160 (189)
T ss_dssp -----------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTSSEECSSCTTTTHHH
T ss_pred -----------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe-CCccHHHHHhCCEEecCCCCCcHHH
Confidence 4556999999999999999999999999999999999997554 33332 4568999888 56
Q ss_pred HHHHHhH
Q 036723 257 NIKEALP 263 (290)
Q Consensus 257 el~~~l~ 263 (290)
++.+.+.
T Consensus 161 ~l~~~l~ 167 (189)
T 3mn1_A 161 EFCELIL 167 (189)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.2e-17 Score=136.77 Aligned_cols=114 Identities=11% Similarity=0.140 Sum_probs=90.4
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+..+++++|+|+.....+..+++.+|+..+|+.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~------------------------------------------ 121 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG------------------------------------------ 121 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc------------------------------------------
Confidence 55666666799999999999999999999998766542
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC-CCCCCcceeecCHh---HHHH
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS-HRAEGVDYALESIH---NIKE 260 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~-~~~~~ad~v~~sl~---el~~ 260 (290)
.||++..++.+++++|+++++|++|||+.+|+++++.+|+.++..... .....+++++.+.. -+.+
T Consensus 122 ----------~k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e 191 (211)
T 3ij5_A 122 ----------QSDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVRE 191 (211)
T ss_dssp ----------CSSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHH
T ss_pred ----------cCChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHH
Confidence 377889999999999999999999999999999999999976554332 23556899988853 2455
Q ss_pred HhHHHHHhhC
Q 036723 261 ALPELWEVAG 270 (290)
Q Consensus 261 ~l~~~~~~~~ 270 (290)
++..++...|
T Consensus 192 ~~~~ll~~~~ 201 (211)
T 3ij5_A 192 VCDLILLAQD 201 (211)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 5555565554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-16 Score=136.33 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=62.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWEV 268 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~~ 268 (290)
++||+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++.+.++ +.+.|.+++..
T Consensus 151 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~~~ 227 (231)
T 1wr8_A 151 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQAPKILKENADYVTKKEYGEGGAEAIYHILEK 227 (231)
T ss_dssp TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCCCHHHHhhCCEEecCCCcchHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999997 55665543 4468999999876 78888776643
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.2e-17 Score=134.81 Aligned_cols=114 Identities=18% Similarity=0.173 Sum_probs=88.2
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+..+++++++||.+...+...++.+|+..+|+.
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~------------------------------------------ 80 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG------------------------------------------ 80 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC------------------------------------------
Confidence 33444444588999999999999999999998765521
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCcceeecCHh--HHH-H
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYALESIH--NIK-E 260 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v~~sl~--el~-~ 260 (290)
.||++..++.+++++|++++++++|||+.+|+.+++.+|+.+++.+... ....+++++.+.. .+. +
T Consensus 81 ----------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~ 150 (180)
T 1k1e_A 81 ----------KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFRE 150 (180)
T ss_dssp ----------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHH
T ss_pred ----------CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHH
Confidence 4899999999999999999999999999999999999999877543222 1456899988853 233 5
Q ss_pred HhHHHHHhhC
Q 036723 261 ALPELWEVAG 270 (290)
Q Consensus 261 ~l~~~~~~~~ 270 (290)
++..++..++
T Consensus 151 ~~~~~l~~~~ 160 (180)
T 1k1e_A 151 MSDMILQAQG 160 (180)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 5556665553
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.3e-18 Score=148.29 Aligned_cols=110 Identities=18% Similarity=0.257 Sum_probs=84.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.++||+.++|+.|+ ++++++|+.....+...++.+|+..+|+.+++.+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k---------------------------- 195 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEK---------------------------- 195 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGH----------------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHH----------------------------
Confidence 67899999998885 78999999999999999999999988887765542
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC-CCCCCcceee--c
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS-HRAEGVDYAL--E 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~-~~~~~ad~v~--~ 253 (290)
....+...+.+ ++++|||+.||++|++.+|+.+++.+.. .....+++++ +
T Consensus 196 ----------------------~~~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~ 248 (280)
T 3skx_A 196 ----------------------AEKVKEVQQKY-----VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRN 248 (280)
T ss_dssp ----------------------HHHHHHHHTTS-----CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSC
T ss_pred ----------------------HHHHHHHHhcC-----CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCC
Confidence 23333333333 7999999999999999999854443322 2245577777 8
Q ss_pred CHhHHHHHhHH
Q 036723 254 SIHNIKEALPE 264 (290)
Q Consensus 254 sl~el~~~l~~ 264 (290)
+++++.++|..
T Consensus 249 ~~~~l~~~l~~ 259 (280)
T 3skx_A 249 DPRDVAAIVEL 259 (280)
T ss_dssp CTHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999887753
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.67 E-value=6.1e-17 Score=135.90 Aligned_cols=113 Identities=15% Similarity=0.232 Sum_probs=88.0
Q ss_pred HHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCC
Q 036723 106 RNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185 (290)
Q Consensus 106 ~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (290)
.+.|+..+++++|+||.....+..+++.+|+..+|+.
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~------------------------------------------- 97 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG------------------------------------------- 97 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS-------------------------------------------
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC-------------------------------------------
Confidence 4556666799999999999999999999998755421
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH---HHH
Q 036723 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN---IKE 260 (290)
Q Consensus 186 ~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e---l~~ 260 (290)
.||++.+++.+++++|+++++|++|||+.||+++++.+|+.++.. ++.. ...+++++.+..+ +.+
T Consensus 98 ---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~ 167 (195)
T 3n07_A 98 ---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVRE 167 (195)
T ss_dssp ---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHH
T ss_pred ---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHH
Confidence 489999999999999999999999999999999999999875543 3332 4568899887421 344
Q ss_pred HhHHHHHhhCC
Q 036723 261 ALPELWEVAGE 271 (290)
Q Consensus 261 ~l~~~~~~~~~ 271 (290)
++..+++..+.
T Consensus 168 ~~~~il~~~~~ 178 (195)
T 3n07_A 168 VCDLILQARNE 178 (195)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHhccc
Confidence 44455555543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.66 E-value=8.7e-17 Score=142.57 Aligned_cols=109 Identities=16% Similarity=0.190 Sum_probs=88.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...++||+.++|+.|+ ++++++||.....+...++.+|+..+|+.++
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~------------------------------ 210 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL------------------------------ 210 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC------------------------------
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC------------------------------
Confidence 3578999999999885 7899999999999999999999987775442
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC--CCCCcceee
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH--RAEGVDYAL 252 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~--~~~~ad~v~ 252 (290)
++++ ..++++++.+ ++|++|||+.+|+.+|+.+|+. +.++.+. ....+++++
T Consensus 211 --------------------~~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~~~~~~~~~~~~ad~v~ 264 (287)
T 3a1c_A 211 --------------------PHQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVL 264 (287)
T ss_dssp --------------------TTCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EEECCCSCCSSCCSSEEE
T ss_pred --------------------hHHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EEeCCCCHHHHhhCCEEE
Confidence 1222 5678888888 9999999999999999999997 4444433 245689999
Q ss_pred --cCHhHHHHHh
Q 036723 253 --ESIHNIKEAL 262 (290)
Q Consensus 253 --~sl~el~~~l 262 (290)
+++.++.++|
T Consensus 265 ~~~~~~~l~~~l 276 (287)
T 3a1c_A 265 IRDDLRDVVAAI 276 (287)
T ss_dssp SSSCTHHHHHHH
T ss_pred eCCCHHHHHHHH
Confidence 9999988765
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-18 Score=144.60 Aligned_cols=175 Identities=13% Similarity=0.103 Sum_probs=115.3
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcC-CCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHh
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLC-IEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVH 91 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 91 (290)
+++|+|+|||||||+|+...+..++.+.+++ ++ .+....... ..... +.... ....+.+.+.+.
T Consensus 2 ~~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~-------~~~~~-~~~~~~~~~~~~ 66 (197)
T 1q92_A 2 GRALRVLVDMDGVLADFEGGFLRKFRARFPD-----QPFIALEDRRGF--WVSEQ-------YGRLR-PGLSEKAISIWE 66 (197)
T ss_dssp CCCEEEEECSBTTTBCHHHHHHHHHHHHCTT-----SCCCCGGGCCSS--CHHHH-------HHHHS-TTHHHHHHHHHT
T ss_pred CCceEEEEeCCCCCccCcHHHHHHHHHHHhc-----CCCCCHHHhcCC--cHHHH-------HHhcC-HHHHHHHHHHHH
Confidence 3578999999999999666665555533332 21 111110000 00000 00000 001222333343
Q ss_pred hcCCCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCC-cceeEEeecccCCCCCCccccccccccC
Q 036723 92 GRLPYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 92 ~~~~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
+......+.++||+.++|+.|+ ++++|+||+.+..+...++++|+.. +|+
T Consensus 67 ~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~------------------------- 121 (197)
T 1q92_A 67 SKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG------------------------- 121 (197)
T ss_dssp STTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC-------------------------
T ss_pred hhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch-------------------------
Confidence 3222346789999999999884 5789999999888888888888876 774
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccc----hHHHH-hcCCeEEEecC
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN----LETGK-RLGLHTVWVGT 241 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~D----i~~a~-~aGi~~i~v~~ 241 (290)
..+++++|++|++|++|||+..| +.+|+ ++|+.+|++.+
T Consensus 122 ------------------------------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~ 165 (197)
T 1q92_A 122 ------------------------------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTA 165 (197)
T ss_dssp ------------------------------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECC
T ss_pred ------------------------------------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecC
Confidence 13567789999999999999998 99999 99999999987
Q ss_pred CCCCC---Ccce-eecCH-hHHHHHhH
Q 036723 242 SHRAE---GVDY-ALESI-HNIKEALP 263 (290)
Q Consensus 242 ~~~~~---~ad~-v~~sl-~el~~~l~ 263 (290)
++... .+++ +++++ +++.++|.
T Consensus 166 ~~~~~~~~~~~~~~v~~~~~~l~~~l~ 192 (197)
T 1q92_A 166 CHNQHLQLQPPRRRLHSWADDWKAILD 192 (197)
T ss_dssp TTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred cccccccccccchhhhhHHHHHHHHhc
Confidence 65422 2344 68898 57777665
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-18 Score=144.87 Aligned_cols=174 Identities=16% Similarity=0.112 Sum_probs=112.7
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhcC
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRL 94 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (290)
.|+|+||+||||+|+...+..++.+ ... |.+......+...... ..+... .....+.+.+.+.+..
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~-----~~~--g~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~ 67 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRR-----RFP--EEPHVPLEQRRGFLAR------EQYRAL-RPDLADKVASVYEAPG 67 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHH-----HST--TSCCCCGGGCCSSCHH------HHHHHH-CTTHHHHHHHHHTSTT
T ss_pred CcEEEEECCCcCccchhHHHHHHHH-----Hhc--CCCCCCHHHHHHhhHH------HHHHHH-hHHHHHHHHHHHHhcC
Confidence 5799999999999966555555442 222 4431111100000000 001110 0111233444444332
Q ss_pred CCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 95 PYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 95 ~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
......++||+.++|+.|+ ++++++||+....+...++.+|+ |+.++++
T Consensus 68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~------------------------ 120 (193)
T 2i7d_A 68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP------------------------ 120 (193)
T ss_dssp TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH------------------------
T ss_pred ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH------------------------
Confidence 2345788999999999884 46899999998888888888887 6655431
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccc----hHHHH-hcCCeEEEecCCCCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRN----LETGK-RLGLHTVWVGTSHRA 245 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~D----i~~a~-~aGi~~i~v~~~~~~ 245 (290)
.+++++|++|++|++|||+.+| +.+|+ ++|+.+|++.+++..
T Consensus 121 ---------------------------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~ 167 (193)
T 2i7d_A 121 ---------------------------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNR 167 (193)
T ss_dssp ---------------------------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGT
T ss_pred ---------------------------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCc
Confidence 2678899999999999999998 99999 999999999876542
Q ss_pred C---Ccce-eecCH-hHHHHHh
Q 036723 246 E---GVDY-ALESI-HNIKEAL 262 (290)
Q Consensus 246 ~---~ad~-v~~sl-~el~~~l 262 (290)
. .+++ ++.++ +++.++|
T Consensus 168 ~~~~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 168 HLVLPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp TCCCCTTSCEECSTTSCHHHHH
T ss_pred ccccccchHHHhhHHHHHHHHh
Confidence 2 2344 58888 5666554
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-17 Score=141.26 Aligned_cols=96 Identities=21% Similarity=0.229 Sum_probs=74.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecc---cCCCCCCccccccccccCCCCCccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFET---LNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
.+.|++.++|+.|+ ++++++||+........++. +..+|+.++...+ ...
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~---------------------- 143 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAG---------------------- 143 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECC----------------------
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcC----------------------
Confidence 45789999998885 78999999976655555554 3445555422111 111
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.||+|+.++.+++++|+ |++|||+.+|+.+|+++|+.++++.++..
T Consensus 144 ---------------------~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 144 ---------------------DKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp ---------------------CCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred ---------------------CCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 59999999999999998 99999999999999999999999988753
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-15 Score=124.95 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=90.7
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+..+++++++||.+...+...++.+|+..+|+.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~------------------------------------------ 98 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG------------------------------------------ 98 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC------------------------------------------
Confidence 45555666689999999999999999999998755421
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCcceeecCH---hHHHH
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYALESI---HNIKE 260 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v~~sl---~el~~ 260 (290)
+||++..++.+++++|++++++++|||+.+|+.+|+.+|+.+++..... ....+++++.+. .-+.+
T Consensus 99 ----------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~ 168 (188)
T 2r8e_A 99 ----------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVRE 168 (188)
T ss_dssp ----------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHH
T ss_pred ----------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHH
Confidence 5999999999999999999999999999999999999999876543322 245689999886 22346
Q ss_pred HhHHHHHhhC
Q 036723 261 ALPELWEVAG 270 (290)
Q Consensus 261 ~l~~~~~~~~ 270 (290)
++..++...|
T Consensus 169 ~l~~ll~~~~ 178 (188)
T 2r8e_A 169 VCDLLLLAQG 178 (188)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 6666777664
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=4.1e-16 Score=130.27 Aligned_cols=96 Identities=20% Similarity=0.307 Sum_probs=80.4
Q ss_pred HHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCC
Q 036723 106 RNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185 (290)
Q Consensus 106 ~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (290)
.+.|+..+++++++||.+...+...++.+|+..+|+.
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~------------------------------------------- 91 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG------------------------------------------- 91 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS-------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC-------------------------------------------
Confidence 4455666799999999999999999999998765531
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC
Q 036723 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES 254 (290)
Q Consensus 186 ~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s 254 (290)
.||++.+++.+++++|++++++++|||+.+|+.+++.+|+.++ +.++.. ...+++++.+
T Consensus 92 ---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~-~~~~~~~~~~~ad~v~~~ 152 (191)
T 3n1u_A 92 ---------QVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVA-VSNAVPQVLEFADWRTER 152 (191)
T ss_dssp ---------CSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTCCHHHHHHSSEECSS
T ss_pred ---------CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEE-eCCccHHHHHhCCEEecC
Confidence 3899999999999999999999999999999999999999864 444332 4468899888
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-15 Score=123.81 Aligned_cols=167 Identities=16% Similarity=0.116 Sum_probs=104.4
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhc
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGR 93 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (290)
++|+|+|||||||+|+...+..++. +.+|.+.... .+ .|...... .+ ...+.+.+.+...
T Consensus 3 m~~~viFD~DGtL~Ds~~~~~~~~~--------~~~g~~~~~~-~~-------~g~~~~~~--~~--~~~~~~~~~~~~~ 62 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGAVVKAVN--------ERADLNIKME-SL-------NGKKLKHM--IP--EHEGLVMDILKEP 62 (180)
T ss_dssp CCCEEEEETBTTTBCHHHHHHHHHH--------HHSCCCCCGG-GC-------TTCCC------------CHHHHHHHST
T ss_pred cccEEEEeCCCcccccHHHHHHHHH--------HHhCCCCCHH-HH-------cCccHHHH--CC--chHHHHHHHHhCc
Confidence 3589999999999996555544443 2456543221 10 02111110 01 1122333333221
Q ss_pred CCCCCCCCChhHHHHHHcCC--CcEEEEeCC---chHH--HHHHHHh-cCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 94 LPYMMLKPDPVLRNLLLSLP--IRKVIFTNA---DKTH--AARVLSR-LGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 94 ~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~---~~~~--~~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
.....++++||+.++|+.|+ ++++|+||. .... ....+.. ++...+|+.+++.++
T Consensus 63 ~~~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~----------------- 125 (180)
T 3bwv_A 63 GFFRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK----------------- 125 (180)
T ss_dssp TGGGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG-----------------
T ss_pred chhccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc-----------------
Confidence 12245789999999999996 689999998 3222 2334444 676677777877541
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR- 244 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~- 244 (290)
. .+ ++|++||||.+++. ..+| .++++.+++.
T Consensus 126 -----------------------------~------------~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~ 157 (180)
T 3bwv_A 126 -----------------------------N------------II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNV 157 (180)
T ss_dssp -----------------------------G------------GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGT
T ss_pred -----------------------------C------------ee----cccEEecCCcchHH--HhCC-CeEEeCCCccc
Confidence 0 11 67999999999985 5689 9999987643
Q ss_pred CCCcceeecCHhHHHHHhHHH
Q 036723 245 AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 245 ~~~ad~v~~sl~el~~~l~~~ 265 (290)
...++++++++.||.++|.++
T Consensus 158 ~~~~~~~i~~~~el~~~l~~~ 178 (180)
T 3bwv_A 158 YEHRFERVSGWRDVKNYFNSI 178 (180)
T ss_dssp TCCSSEEECSHHHHHHHHHHH
T ss_pred CCCCceecCCHHHHHHHHHHh
Confidence 346889999999999877653
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-16 Score=137.40 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=49.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHHhh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWEVA 269 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~~~ 269 (290)
+..|+.+++.+++++|++++++++|||+.||++|++.+|+.++ ++++.. +..|++++.+.++ +.++|.+++.-.
T Consensus 195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va-m~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~ 272 (279)
T 3mpo_A 195 RASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVA-MGNAIDEVKEAAQAVTLTNAENGVAAAIRKYALNE 272 (279)
T ss_dssp SCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECB-C---CCHHHHHCSCBC------CHHHHHC------
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceee-ccCCCHHHHHhcceeccCCCccHHHHHHHHHhccc
Confidence 5678999999999999999999999999999999999998544 333333 5568999888665 777777665544
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-16 Score=138.47 Aligned_cols=79 Identities=14% Similarity=0.268 Sum_probs=64.2
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--
Q 036723 182 PNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN-- 257 (290)
Q Consensus 182 ~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e-- 257 (290)
+....++++ ++||+.+++.+++++|++++++++|||+.||++|++.+|+.+++ +++.. +..|++++.+.++
T Consensus 176 ~~~~ei~~~----~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~dG 250 (261)
T 2rbk_A 176 PAFADVTAK----GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDEDG 250 (261)
T ss_dssp TTCCEEEST----TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGGTH
T ss_pred CCeEEecCC----CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCchhh
Confidence 333444555 79999999999999999999999999999999999999996544 44332 4468999999999
Q ss_pred HHHHhHHH
Q 036723 258 IKEALPEL 265 (290)
Q Consensus 258 l~~~l~~~ 265 (290)
+.++|.++
T Consensus 251 v~~~l~~~ 258 (261)
T 2rbk_A 251 ISKAMKHF 258 (261)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98887663
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=4.5e-15 Score=129.53 Aligned_cols=69 Identities=16% Similarity=0.171 Sum_probs=56.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPE 264 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~ 264 (290)
+++|+.+++.+++++|++++++++|||+.||++|++.+|+.++ ++++.. +..|++++.+.+| +.+.|.+
T Consensus 198 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va-m~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 198 DFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIA-MKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp TCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEE-ETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEE-ecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 6899999999999999999999999999999999999997554 444433 5568999988764 5555544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.4e-16 Score=137.86 Aligned_cols=72 Identities=14% Similarity=0.135 Sum_probs=61.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWE 267 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~ 267 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++.+.++ +.++|.+++.
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~ 301 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYS-YAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA 301 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEE-EECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCe-EEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence 67889999999999999999999999999999999999975 44455443 5568999999887 8888888764
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.6e-15 Score=133.97 Aligned_cols=70 Identities=11% Similarity=0.169 Sum_probs=59.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++.+.++ +.++|.++
T Consensus 209 ~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~-vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 209 GVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGIS-YAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCE-EEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 67889999999999999999999999999999999999975 55555543 5568999999877 77777654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.6e-15 Score=138.34 Aligned_cols=94 Identities=24% Similarity=0.332 Sum_probs=81.8
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCc------------hHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNAD------------KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
++||+.++|+.|+ ++++|+||.. ...+...++.+|+. |+.++++++...
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~-------------- 151 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLN-------------- 151 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTT--------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCC--------------
Confidence 6799999998885 8899999965 22367778899985 899999887664
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC----CCCCcEEEEcCCc-----------------c
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN----INPRKTIFFDDSI-----------------R 224 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~----~~~~e~i~iGDs~-----------------~ 224 (290)
+||+|.+|+.+++++| +++++|+||||+. +
T Consensus 152 -----------------------------~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~ 202 (416)
T 3zvl_A 152 -----------------------------RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCA 202 (416)
T ss_dssp -----------------------------STTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCH
T ss_pred -----------------------------CCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChh
Confidence 7999999999999998 9999999999997 7
Q ss_pred chHHHHhcCCeEEEe
Q 036723 225 NLETGKRLGLHTVWV 239 (290)
Q Consensus 225 Di~~a~~aGi~~i~v 239 (290)
|+.+|+++|+.++..
T Consensus 203 Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 203 DRLFALNVGLPFATP 217 (416)
T ss_dssp HHHHHHHHTCCEECH
T ss_pred hHHHHHHcCCcccCc
Confidence 999999999998854
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.57 E-value=9.2e-15 Score=128.20 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=61.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWEV 268 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~~ 268 (290)
+++|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++.+.++ +.++|.+++..
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~ 265 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYS-FAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN 265 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCe-EEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999995 44655543 4468999988765 88888887654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.54 E-value=8.2e-15 Score=127.28 Aligned_cols=69 Identities=16% Similarity=0.280 Sum_probs=57.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPE 264 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~ 264 (290)
+..|..+++.+++++|+++++|++|||+.||++|++.+|+.++ ++++.. +..|++++.+.++ +.++|.+
T Consensus 181 ~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~va-m~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 181 GGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVA-MGNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp SCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEE-ETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEE-eCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 6778999999999999999999999999999999999999765 455443 4568999988764 5665554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=125.24 Aligned_cols=69 Identities=13% Similarity=0.188 Sum_probs=57.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPE 264 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~ 264 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++.+.++ +.+.|.+
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIG-VAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCe-EEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 67889999999999999999999999999999999999985 44555443 5568999988665 6665554
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=5.1e-16 Score=136.11 Aligned_cols=112 Identities=13% Similarity=0.217 Sum_probs=90.7
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...++||+.++|+.|+ ++++++||.+...+..+++.+|+..+|+.++.
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p----------------------------- 184 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP----------------------------- 184 (263)
Confidence 3468999999999996 77999999999999999999999888876541
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC-CCCCCCcceee-
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT-SHRAEGVDYAL- 252 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~-~~~~~~ad~v~- 252 (290)
+.+..++++++.++++|+||||+.+|+.+++.+|+..++... ......+|+++
T Consensus 185 -------------------------~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~ 239 (263)
T 2yj3_A 185 -------------------------EDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILV 239 (263)
Confidence 234567888999999999999999999999999987555422 12245689998
Q ss_pred -cCHhHHHHHhH
Q 036723 253 -ESIHNIKEALP 263 (290)
Q Consensus 253 -~sl~el~~~l~ 263 (290)
+++.+|.+++.
T Consensus 240 ~~~l~~l~~~l~ 251 (263)
T 2yj3_A 240 SNDIGTLLGLIK 251 (263)
Confidence 88888877553
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=128.10 Aligned_cols=71 Identities=18% Similarity=0.183 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc--eeecCHhH--HHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD--YALESIHN--IKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad--~v~~sl~e--l~~~l~~~~ 266 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|+ +++.+.++ +.+.|.+++
T Consensus 207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~-vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 207 GVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKG-CIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCE-EEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 67889999999999999999999999999999999999975 45555443 34455 46666543 676666654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.4e-14 Score=115.63 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=80.7
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHH--hcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLS--RLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRP 182 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~--~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (290)
..+.|+..+++++++|+. ..+...++ .+++. + +. +
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~~----g-------------------------------- 80 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----EV----S-------------------------------- 80 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----EC----S--------------------------------
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----EE----C--------------------------------
Confidence 345666667899999998 56777888 45543 2 21 1
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH---
Q 036723 183 NADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--- 257 (290)
Q Consensus 183 ~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--- 257 (290)
.++++.+++.+++++|++++++++|||+.||++|++.+|+.++ +.++.. +..+++++.+-.+
T Consensus 81 ------------~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a-~~na~~~~k~~Ad~v~~~~~~~G~ 147 (168)
T 3ewi_A 81 ------------VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV-PADACSGAQKAVGYICKCSGGRGA 147 (168)
T ss_dssp ------------CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE-CTTCCHHHHTTCSEECSSCTTTTH
T ss_pred ------------CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE-eCChhHHHHHhCCEEeCCCCCccH
Confidence 4778999999999999999999999999999999999999754 544443 6678999887432
Q ss_pred HHHHhHHHHHhh
Q 036723 258 IKEALPELWEVA 269 (290)
Q Consensus 258 l~~~l~~~~~~~ 269 (290)
+.+++..++...
T Consensus 148 ~~~~~~~il~~~ 159 (168)
T 3ewi_A 148 IREFAEHIFLLI 159 (168)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 444444445443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-13 Score=122.38 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=59.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~ 266 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+ .+.++++.. +..|++++.+.++ +.++|.+++
T Consensus 196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~ 270 (282)
T 1rkq_A 196 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 270 (282)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 5788999999999999999999999999999999999998 456655543 3458999888665 888887764
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=8e-13 Score=120.38 Aligned_cols=73 Identities=8% Similarity=0.097 Sum_probs=61.1
Q ss_pred CCCCCCCcHHHHHHHHHHc----------------------CC-----CCCcEEEEcCCc-cchHHHHhcCCeEEEecCC
Q 036723 191 TPVVCKPFEEAFEQVFKIA----------------------NI-----NPRKTIFFDDSI-RNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 191 ~~~~~Kp~~~~~~~il~~~----------------------~~-----~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~ 242 (290)
..++|||.+.+|+.+++.+ |+ +++++++|||++ +||.+|+++|+.++++.++
T Consensus 241 ~~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G 320 (352)
T 3kc2_A 241 DYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTG 320 (352)
T ss_dssp CEECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSS
T ss_pred ceEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccC
Confidence 3578999999999887654 22 679999999999 6999999999999999886
Q ss_pred CC-------CCCcceeecCHhHHHHHhH
Q 036723 243 HR-------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 243 ~~-------~~~ad~v~~sl~el~~~l~ 263 (290)
.. ...|+++++++.|+.+++.
T Consensus 321 ~~~~~~~~~~~~pd~vi~~l~el~~~il 348 (352)
T 3kc2_A 321 VYNEGDDLKECKPTLIVNDVFDAVTKTL 348 (352)
T ss_dssp SCCTTCCCTTCCCSEECSSHHHHHHHHH
T ss_pred CCCcccccccCCCCEEECCHHHHHHHHH
Confidence 42 3568999999999988764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.2e-13 Score=118.63 Aligned_cols=78 Identities=15% Similarity=0.080 Sum_probs=61.2
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--
Q 036723 182 PNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN-- 257 (290)
Q Consensus 182 ~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e-- 257 (290)
+....++++ +..|+.+++.+++++|++++++++|||+.||++|++.+|+ .+.++++.. +..|++++.+.++
T Consensus 205 ~~~lei~~~----~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~~~~~~~a~~v~~~~~~dG 279 (288)
T 1nrw_A 205 EHNFELSSR----KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAREDIKSIADAVTLTNDEHG 279 (288)
T ss_dssp TTEEEEEET----TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCCHHHHHHCSEECCCGGGTH
T ss_pred CCcEEEecC----CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCCCHHHHhhCceeecCCCcCh
Confidence 333445555 6788999999999999999999999999999999999999 566766543 3348899888765
Q ss_pred HHHHhHH
Q 036723 258 IKEALPE 264 (290)
Q Consensus 258 l~~~l~~ 264 (290)
+.+.|.+
T Consensus 280 Va~~i~~ 286 (288)
T 1nrw_A 280 VAHMMKH 286 (288)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.32 E-value=4.2e-12 Score=108.65 Aligned_cols=70 Identities=7% Similarity=0.021 Sum_probs=56.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++.+.++ +.+.|.++
T Consensus 151 ~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~ 224 (227)
T 1l6r_A 151 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANATDNIKAVSDFVSDYSYGEEIGQIFKHF 224 (227)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCchHHHHHhCCEEecCCCCcHHHHHHHHH
Confidence 68889999999999999999999999999999999999985 55665543 3458899887643 66655543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.29 E-value=4e-12 Score=111.02 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=70.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCc---hHHHHHHHHhcCCC--CcceeEEeecccCCCCCCccccccccccCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNAD---KTHAARVLSRLGLE--DCFERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~---~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
...++||+.++|+.|+ ++++++||.. ...+...++.+|+. .+|+.+++.+..
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-------------------- 158 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-------------------- 158 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--------------------
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--------------------
Confidence 3577899999998885 8899999987 55667778888998 667777765421
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH-------h---------cC
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK-------R---------LG 233 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~-------~---------aG 233 (290)
.||.+ ...++ ..+. ..+++|||+.+|+.+|+ + +|
T Consensus 159 -------------------------~K~~~--~~~~~-~~~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG 208 (258)
T 2i33_A 159 -------------------------KGKEK--RRELV-SQTH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFG 208 (258)
T ss_dssp -------------------------CSSHH--HHHHH-HHHE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBT
T ss_pred -------------------------CCcHH--HHHHH-HhCC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhc
Confidence 35544 23333 2333 34999999999999993 4 89
Q ss_pred CeEEEecCCC
Q 036723 234 LHTVWVGTSH 243 (290)
Q Consensus 234 i~~i~v~~~~ 243 (290)
+.++.+.++.
T Consensus 209 ~~~i~lpn~~ 218 (258)
T 2i33_A 209 EKFIIFPNPM 218 (258)
T ss_dssp TTEEECCCCS
T ss_pred CceEECCCCC
Confidence 9999887764
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.29 E-value=4.2e-12 Score=111.06 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=56.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.. .++++.. +..|++++.+.++ +.++|.++
T Consensus 188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v-~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~ 261 (268)
T 1nf2_A 188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRV-AMENAIEKVKEASDIVTLTNNDSGVSYVLERI 261 (268)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEE-ECTTSCHHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEE-EecCCCHHHHhhCCEEEccCCcchHHHHHHHH
Confidence 578889999999999999999999999999999999999954 4444432 3358899888554 66666554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.5e-12 Score=111.79 Aligned_cols=72 Identities=15% Similarity=0.084 Sum_probs=57.7
Q ss_pred CCcHHHHHHHHHHcCCCC--CcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecCH--hHHHHHhHHHHHhh
Q 036723 196 KPFEEAFEQVFKIANINP--RKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESI--HNIKEALPELWEVA 269 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~--~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl--~el~~~l~~~~~~~ 269 (290)
++|+.+++.+++++|+++ +++++|||+.||+.|++.+|+. +.++++.. ..+++++.+. +.+.+.+.+++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~-~~~~~~~~~~~~~gv~~~~~~~~~~~ 250 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRGDP-PEGVLATPAPGPEGFRYAVERYLLPR 250 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSSCC-CTTCEECSSCHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCChhh-cCCcEEeCCCCchHHHHHHHHHHHhC
Confidence 677999999999999999 9999999999999999999986 55555444 5677887663 34677777766544
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.5e-12 Score=114.63 Aligned_cols=72 Identities=11% Similarity=0.127 Sum_probs=59.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-CHh--HHHHHhHHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE-SIH--NIKEALPELWE 267 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~-sl~--el~~~l~~~~~ 267 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +..|++++. +.. .+.++|.+++.
T Consensus 222 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~ 298 (301)
T 2b30_A 222 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 298 (301)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHh
Confidence 57889999999999999999999999999999999999985 55666543 346889988 754 48887877653
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.20 E-value=2.2e-11 Score=108.13 Aligned_cols=98 Identities=13% Similarity=0.117 Sum_probs=81.8
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHH---HHHHHHh--------cCCCCcceeEEeecccCCCCCCccccccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTH---AARVLSR--------LGLEDCFERIISFETLNSTDKGTVLVDQDAS 164 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~---~~~~l~~--------~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 164 (290)
..++||+.++|+.|+ ++++++||.+... ....++. +|+ .|+.+++.++..
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~-------------- 250 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD-------------- 250 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC--------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC--------------
Confidence 457999999999885 7899999987543 3556667 888 488888766432
Q ss_pred cCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 165 ESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRK-TIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e-~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+|..+..++++++.++.+ +++|||+.+|+++|+++|+.++++.+|
T Consensus 251 ------------------------------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 251 ------------------------------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp ------------------------------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred ------------------------------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 599999999999999887655 799999999999999999999999887
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.15 E-value=2.9e-11 Score=109.10 Aligned_cols=58 Identities=14% Similarity=0.164 Sum_probs=46.4
Q ss_pred CCCCCc----EEEEcCCccchHHHHhc----CCeEEEecCCCC--CCCcceeecC--HhHHHHHhHHHHHhh
Q 036723 210 NINPRK----TIFFDDSIRNLETGKRL----GLHTVWVGTSHR--AEGVDYALES--IHNIKEALPELWEVA 269 (290)
Q Consensus 210 ~~~~~e----~i~iGDs~~Di~~a~~a----Gi~~i~v~~~~~--~~~ad~v~~s--l~el~~~l~~~~~~~ 269 (290)
|+++++ |++|||+.||++|++.+ |+.+++ ++.. +..|++++.+ .+.+.++|.+++...
T Consensus 214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~ 283 (332)
T 1y8a_A 214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELFMERK 283 (332)
T ss_dssp HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHHG
T ss_pred ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHcC
Confidence 677888 99999999999999999 997555 4432 4568999877 677888888876544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-10 Score=101.15 Aligned_cols=74 Identities=9% Similarity=0.075 Sum_probs=43.5
Q ss_pred CCCcHHHHHHHHHHcC-CCCCc--EEEEcCCccchHHHHhcCCeEEEecCCC---CCC----Ccc-eeecCHh--HHHHH
Q 036723 195 CKPFEEAFEQVFKIAN-INPRK--TIFFDDSIRNLETGKRLGLHTVWVGTSH---RAE----GVD-YALESIH--NIKEA 261 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~-~~~~e--~i~iGDs~~Di~~a~~aGi~~i~v~~~~---~~~----~ad-~v~~sl~--el~~~ 261 (290)
+.+|+.+++.+++++| +++++ +++|||+.||+.|++.+|+. +.++++. ... .|+ +++.+.+ .+.+.
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCchHHHHH
Confidence 6788999999999999 99999 99999999999999999985 7776664 221 367 7876644 46777
Q ss_pred hHHHHHhh
Q 036723 262 LPELWEVA 269 (290)
Q Consensus 262 l~~~~~~~ 269 (290)
|.+++..+
T Consensus 266 l~~~l~~~ 273 (275)
T 1xvi_A 266 LDHFFSAR 273 (275)
T ss_dssp --------
T ss_pred HHHHHHhc
Confidence 76665443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.98 E-value=3.4e-10 Score=98.41 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=59.6
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCch----HHHHHHHHhcCCCCcce-eEEeecccCCCCCCccccccccccCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADK----THAARVLSRLGLEDCFE-RIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~----~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
..+++||+.++|+.|+ ++++++||.+. ......|+.+|+..+++ .++....
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~--------------------- 157 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD--------------------- 157 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS---------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC---------------------
Confidence 4688899999998874 78999998755 57788899999987663 3443221
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHH
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLET 228 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~ 228 (290)
...+...++.+.+. |.. .+++|||..+|+.+
T Consensus 158 -------------------------~~~K~~~r~~l~~~-Gy~--iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 158 -------------------------KSAKAARFAEIEKQ-GYE--IVLYVGDNLDDFGN 188 (262)
T ss_dssp -------------------------CSCCHHHHHHHHHT-TEE--EEEEEESSGGGGCS
T ss_pred -------------------------CCChHHHHHHHHhc-CCC--EEEEECCChHHhcc
Confidence 12335566666554 442 39999999999998
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.97 E-value=3.9e-10 Score=97.93 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=41.2
Q ss_pred HHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCch----HHHHHHHHhcCCCCcce
Q 036723 83 CDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADK----THAARVLSRLGLEDCFE 141 (290)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~----~~~~~~l~~~gl~~~f~ 141 (290)
...+.+.+.. ...+++||+.++|+.|+ ++++++||.+. ......|+.+|+..+++
T Consensus 88 ~~~w~~wv~~----g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (260)
T 3pct_A 88 PKTWTKWVDA----RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND 149 (260)
T ss_dssp HHHHHHHHHT----TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred HHHHHHHHHc----CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence 3444444443 34688999999998884 88999999865 47788899999987664
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.5e-09 Score=93.79 Aligned_cols=61 Identities=8% Similarity=-0.066 Sum_probs=49.3
Q ss_pred CCcHHHHHHHHHHcCC-CCCcEEEEcCCccchHHHHhcCCeEEEecCCC-C--CCCcceeecCHhH
Q 036723 196 KPFEEAFEQVFKIANI-NPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-R--AEGVDYALESIHN 257 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~-~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~--~~~ad~v~~sl~e 257 (290)
..|+.+++.+++++|+ +++++++|||+.||++|++.+|+. +.++++. . +..|++++++..+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCCCTTEEEESSHHHHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCCccccchhceEEeccccc
Confidence 5678999999999998 999999999999999999999986 5565554 2 3347777766544
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.7e-08 Score=95.46 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=78.9
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhc-CC-------------CCcceeEEeecccCCCCCCccccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRL-GL-------------EDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~-gl-------------~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
+...|.+..+|++|+ .+++++||....++...++.+ |. .++||.++.... .+
T Consensus 245 v~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~-KP----------- 312 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDAR-KP----------- 312 (555)
T ss_dssp BCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCC-TT-----------
T ss_pred cCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCC-CC-----------
Confidence 455778888888885 389999999999999999888 63 357888655331 11
Q ss_pred cccCC-CCCcccccc-ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-hcCCeEEE
Q 036723 163 ASESE-RPTELFDID-DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGK-RLGLHTVW 238 (290)
Q Consensus 163 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~-~aGi~~i~ 238 (290)
.|..+ .+...+|.. +.+.-........++.+.. ..-+..+++.+|+++++++||||.+ .||..++ .+||.+++
T Consensus 313 ~FF~~~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~---gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiL 389 (555)
T 2jc9_A 313 LFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYS---GGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFL 389 (555)
T ss_dssp GGGTTCCCEEEEETTTTEECSSCCCSCCCTTCCEE---ECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEE
T ss_pred CcccCCCcceEeecCCCccccccccccccCCceec---cCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEE
Confidence 01000 011111100 1000000000111110000 0114788889999999999999999 8999997 89999999
Q ss_pred ecC
Q 036723 239 VGT 241 (290)
Q Consensus 239 v~~ 241 (290)
|-.
T Consensus 390 ViP 392 (555)
T 2jc9_A 390 VIP 392 (555)
T ss_dssp ECT
T ss_pred EEe
Confidence 965
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.2e-10 Score=94.73 Aligned_cols=95 Identities=15% Similarity=0.060 Sum_probs=82.0
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
+.+.||+.++|+.++ +.++|+|++.+.++..+++.++...+|+.+++.+++..
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~------------------------- 121 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF------------------------- 121 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEE-------------------------
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEccccee-------------------------
Confidence 567899999999997 88999999999999999999999999999988876543
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.| ..|...++++|.++++|++|||+..++.++.++|+.++..
T Consensus 122 ------------------~k---~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~ 163 (195)
T 2hhl_A 122 ------------------HR---GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSW 163 (195)
T ss_dssp ------------------ET---TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCC
T ss_pred ------------------cC---CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeee
Confidence 22 3455667889999999999999999999999999986533
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-09 Score=90.41 Aligned_cols=92 Identities=14% Similarity=0.114 Sum_probs=79.3
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
+.+.||+.++|+.++ +.++|+|++.+.++..+++.++...+|+.+++.++...
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~------------------------- 108 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF------------------------- 108 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEE-------------------------
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCcee-------------------------
Confidence 577899999999997 88999999999999999999999999999888775542
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
.| ..+...++++|.++++|++|||+..++.++..+|+..
T Consensus 109 ------------------~k---~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 109 ------------------HR---GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ------------------ET---TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred ------------------cC---CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 11 2345567888999999999999999999999999984
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.61 E-value=3.3e-07 Score=81.01 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=39.9
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEe
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~ 145 (290)
..+++.||+.++++.|+ ++++++|++....++.+++.+|+......+++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~ 189 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS 189 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEE
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEe
Confidence 35788899999998885 88999999999999999999998754444444
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=80.70 Aligned_cols=108 Identities=11% Similarity=0.060 Sum_probs=66.2
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC--cceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED--CFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
++++|++.++++.|+ ++++|+|++....++.+.+.+|+.- ..+.+++..-.... +..+..+.....
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~--------dG~~tg~~~~~~- 290 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDD--------EGKILPKFDKDF- 290 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECT--------TCCEEEEECTTS-
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEec--------CCceeeeecCcc-
Confidence 347999999999986 8899999999999999999987642 12445543211000 000000000000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+++ .+..|+..++.+++.. +....++++|||.+|+.|.+..+
T Consensus 291 p~~-----------------~~~gK~~~i~~~~~~~-~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 291 PIS-----------------IREGKVQTINKLIKND-RNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp CCC-----------------STHHHHHHHHHHTCCT-TEECCSEEEECSGGGHHHHHHCT
T ss_pred cee-----------------CCCchHHHHHHHHHhc-CCCCcEEEEECCHhHHHHHhcCc
Confidence 000 1334566666655432 34456999999999999999743
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=3.9e-08 Score=84.90 Aligned_cols=43 Identities=14% Similarity=-0.053 Sum_probs=35.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCC----ccchHHHHhcCCeEEEecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDS----IRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs----~~Di~~a~~aGi~~i~v~~ 241 (290)
+..|..+++.+++ +++++++|||+ .||++|.+.+|...+.+++
T Consensus 185 gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 185 GWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 4666788888887 88999999995 9999999999866666643
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=9.8e-07 Score=75.71 Aligned_cols=69 Identities=19% Similarity=0.163 Sum_probs=54.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CC-------CcceeecCHhH--HHHHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AE-------GVDYALESIHN--IKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~-------~ad~v~~sl~e--l~~~l~ 263 (290)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.++++.. +. .+++++.+..+ +.+.|.
T Consensus 160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 67899999999999999999999999999999999999985 66665543 22 26788887654 555444
Q ss_pred H
Q 036723 264 E 264 (290)
Q Consensus 264 ~ 264 (290)
+
T Consensus 239 ~ 239 (244)
T 1s2o_A 239 H 239 (244)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.12 E-value=1.1e-05 Score=75.21 Aligned_cols=127 Identities=12% Similarity=0.061 Sum_probs=77.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc---------CCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL---------GLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~---------gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
+...|.+..+|++|+ .+++++||.+..++...+..+ +..++||.|++...=. .+....
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP-------~FF~~~--- 254 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKP-------RFFYDN--- 254 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTT-------HHHHSC---
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCC-------CcccCC---
Confidence 345788888888885 679999999999998887664 2446899988754211 011110
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHh-cCCeEEEecC
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKR-LGLHTVWVGT 241 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~-aGi~~i~v~~ 241 (290)
..++.....-+.........+|.+..-. -...+.+.+|....+|+||||++ .||..++. .||.|++|-.
T Consensus 255 ---~~~~~v~~~~g~l~~~~~~~~~~vY~gG---n~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 255 ---LRFLSVNPENGTMTNVHGPIVPGVYQGG---NAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp ---CCEEEECTTTCCEEECCSSCCSEEEEEC---CHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred ---CcceEEECCCCcccccccccCCceeecC---cHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence 0111111000000011111111112222 24556677899999999999999 89877765 7999999954
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.4e-06 Score=81.76 Aligned_cols=108 Identities=16% Similarity=0.198 Sum_probs=80.6
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+.+|+...|..+ .
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~------~-------------------------- 504 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV------L-------------------------- 504 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC------C--------------------------
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeC------C--------------------------
Confidence 46788888888775 889999999999999999999986433211 1
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC--CCCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH--RAEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~--~~~~ad~v~-- 252 (290)
+..|.+.++.+.++ +++++|||+.||+.|.+.+|+. +.++++. ....+|+++
T Consensus 505 ------------------P~~K~~~v~~l~~~-----~~v~~vGDg~ND~~al~~A~vg-iamg~g~~~a~~~AD~vl~~ 560 (645)
T 3j08_A 505 ------------------PHQKSEEVKKLQAK-----EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIR 560 (645)
T ss_dssp ------------------TTCHHHHHHHHTTT-----CCEEEEECSSSCHHHHHHSSEE-EEECCCSCCSSCCSSSEESS
T ss_pred ------------------HHhHHHHHHHHhhC-----CeEEEEeCCHhHHHHHHhCCEE-EEeCCCcHHHHHhCCEEEec
Confidence 24555666555433 7899999999999999999975 4444443 366789998
Q ss_pred cCHhHHHHHhH
Q 036723 253 ESIHNIKEALP 263 (290)
Q Consensus 253 ~sl~el~~~l~ 263 (290)
++++.+.+++.
T Consensus 561 ~~~~~i~~~i~ 571 (645)
T 3j08_A 561 DDLRDVVAAIQ 571 (645)
T ss_dssp CCTTHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 67888877664
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.5e-05 Score=79.06 Aligned_cols=108 Identities=16% Similarity=0.198 Sum_probs=79.9
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+.+|+...|..+ .
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~------~-------------------------- 582 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV------L-------------------------- 582 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC------C--------------------------
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccC------C--------------------------
Confidence 56788888887775 889999999999999999999986332111 1
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC--CCCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH--RAEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~--~~~~ad~v~-- 252 (290)
+..|...++.+.++ +++++|||+.||+.|.+.+|+. +.++++. ....+|+++
T Consensus 583 ------------------P~~K~~~v~~l~~~-----~~v~~vGDg~ND~~al~~A~vg-iamg~g~~~a~~~AD~vl~~ 638 (723)
T 3j09_A 583 ------------------PHQKSEEVKKLQAK-----EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIR 638 (723)
T ss_dssp ------------------TTCHHHHHHHHTTT-----CCEEEEECSSTTHHHHHHSSEE-EECCCCSCCSSCCSSEECSS
T ss_pred ------------------HHHHHHHHHHHhcC-----CeEEEEECChhhHHHHhhCCEE-EEeCCCcHHHHHhCCEEEeC
Confidence 24455665555433 7899999999999999999975 4444443 366789998
Q ss_pred cCHhHHHHHhH
Q 036723 253 ESIHNIKEALP 263 (290)
Q Consensus 253 ~sl~el~~~l~ 263 (290)
+++..+.+++.
T Consensus 639 ~~~~~i~~~i~ 649 (723)
T 3j09_A 639 DDLRDVVAAIQ 649 (723)
T ss_dssp CCTTHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 67777777664
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.83 E-value=2.7e-05 Score=66.43 Aligned_cols=68 Identities=13% Similarity=0.053 Sum_probs=56.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc--CCeEEEecCCCCCCCcceeecC---HhHHHHHhHHHHHhh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL--GLHTVWVGTSHRAEGVDYALES---IHNIKEALPELWEVA 269 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a--Gi~~i~v~~~~~~~~ad~v~~s---l~el~~~l~~~~~~~ 269 (290)
+..|..+++.+++++| +++|||+.||++|.+.+ |.. +.++++ +..|++++.+ -+.+.++|.+++...
T Consensus 158 ~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~-vam~Na--~~~A~~v~~~~~~~~gV~~~l~~~~~~~ 229 (239)
T 1u02_A 158 GVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALT-IKVGEG--ETHAKFHVADYIEMRKILKFIEMLGVQK 229 (239)
T ss_dssp TCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEE-EEESSS--CCCCSEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcE-EEECCC--CCcceEEeCCCCCHHHHHHHHHHHHHhc
Confidence 5678999999999998 99999999999999999 974 555555 4678999988 777888888877665
Q ss_pred C
Q 036723 270 G 270 (290)
Q Consensus 270 ~ 270 (290)
.
T Consensus 230 ~ 230 (239)
T 1u02_A 230 K 230 (239)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.79 E-value=3.1e-06 Score=77.15 Aligned_cols=51 Identities=24% Similarity=0.311 Sum_probs=43.2
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC-cce-eEEeecc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED-CFE-RIISFET 148 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~-~f~-~i~~~~~ 148 (290)
.+...||+.++|+.+. +.++|+|++...++..+++.++... +|. .+++.++
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~ 127 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDD 127 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTT
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecC
Confidence 3677899999999996 7799999999999999999999887 786 5665543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.75 E-value=4.5e-05 Score=75.58 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=76.8
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+.+|+...+..+ .
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~------~-------------------------- 601 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEI------M-------------------------- 601 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSC------C--------------------------
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEec------C--------------------------
Confidence 45678888888775 889999999999999999999986533211 1
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~-- 252 (290)
+..|.+.++.+.+ ..+.++++||+.||+.|.+.+|+. |.++++.. ...+|+++
T Consensus 602 ------------------P~~K~~~v~~l~~----~g~~V~~vGDG~ND~paL~~AdvG-IAmg~g~d~a~~~AD~vl~~ 658 (736)
T 3rfu_A 602 ------------------PEDKSRIVSELKD----KGLIVAMAGDGVNDAPALAKADIG-IAMGTGTDVAIESAGVTLLH 658 (736)
T ss_dssp ------------------HHHHHHHHHHHHH----HSCCEEEEECSSTTHHHHHHSSEE-EEESSSCSHHHHHCSEEECS
T ss_pred ------------------HHHHHHHHHHHHh----cCCEEEEEECChHhHHHHHhCCEE-EEeCCccHHHHHhCCEEEcc
Confidence 1223344444433 456799999999999999999985 55555544 45588887
Q ss_pred cCHhHHHHHhH
Q 036723 253 ESIHNIKEALP 263 (290)
Q Consensus 253 ~sl~el~~~l~ 263 (290)
++++.+.+++.
T Consensus 659 ~~~~~i~~ai~ 669 (736)
T 3rfu_A 659 GDLRGIAKARR 669 (736)
T ss_dssp CCSTTHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 45666655443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.60 E-value=7.1e-05 Score=76.76 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=83.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcce----eEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFE----RIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+.+|+..... .+++.++.... ..+...++
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l------------~~~~~~~~ 670 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL------------PLAEQREA 670 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTS------------CHHHHHHH
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhC------------CHHHHHHH
Confidence 45788888888775 8899999999999999999999864321 23333221110 00000000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcce
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDY 250 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~ 250 (290)
+.-...+++.. ++.|..+++.+.++ .+.++++||+.||+.|.+.|++..+ ++.+.. ...+|+
T Consensus 671 ~~~~~v~~r~~-----------P~~K~~~v~~l~~~----g~~v~~~GDG~ND~~alk~Advgia-mg~g~~~ak~aAd~ 734 (995)
T 3ar4_A 671 CRRACCFARVE-----------PSHKSKIVEYLQSY----DEITAMTGDGVNDAPALKKAEIGIA-MGSGTAVAKTASEM 734 (995)
T ss_dssp HHHCCEEESCC-----------SSHHHHHHHHHHTT----TCCEEEEECSGGGHHHHHHSTEEEE-ETTSCHHHHHTCSE
T ss_pred HhhCcEEEEeC-----------HHHHHHHHHHHHHC----CCEEEEEcCCchhHHHHHHCCeEEE-eCCCCHHHHHhCCE
Confidence 00000111110 23445555554443 4789999999999999999998544 454433 456899
Q ss_pred eec--CHhHHHHHhH
Q 036723 251 ALE--SIHNIKEALP 263 (290)
Q Consensus 251 v~~--sl~el~~~l~ 263 (290)
++. ++..+.+++.
T Consensus 735 vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 735 VLADDNFSTIVAAVE 749 (995)
T ss_dssp EETTCCHHHHHHHHH
T ss_pred EECCCCHHHHHHHHH
Confidence 984 5888877654
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00075 Score=60.41 Aligned_cols=46 Identities=17% Similarity=0.099 Sum_probs=36.5
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc----CCCCcceeEEee
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL----GLEDCFERIISF 146 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~----gl~~~f~~i~~~ 146 (290)
..++|++.++++.|+ +.++|+|.+....++.+.... |+. -+.++.+
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp--~e~ViG~ 194 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK--PENVIGV 194 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC--GGGEEEE
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC--HHHeEee
Confidence 357999999999996 889999999999999888764 443 3555554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=5.2e-05 Score=65.48 Aligned_cols=57 Identities=7% Similarity=-0.071 Sum_probs=43.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHhcCCeEEEecCCCC--CCCcceeecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDD----SIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES 254 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGD----s~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s 254 (290)
+..|..+++.+ +|++++++++||| +.||++|.+.+|...+.++++.. +..+++++++
T Consensus 195 ~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 195 GWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPE 257 (262)
T ss_dssp TCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCC
Confidence 56677898888 9999999999999 99999999999986777755432 2334454444
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.13 E-value=8.8e-05 Score=66.22 Aligned_cols=40 Identities=20% Similarity=0.227 Sum_probs=35.0
Q ss_pred CCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCc
Q 036723 100 KPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDC 139 (290)
Q Consensus 100 ~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~ 139 (290)
...|++.++|+.+. +.++|+|++...++..+++.++....
T Consensus 164 ~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~ 205 (320)
T 3shq_A 164 LMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASN 205 (320)
T ss_dssp HBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTC
T ss_pred EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCC
Confidence 34589999999996 78999999999999999999987654
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00014 Score=60.62 Aligned_cols=93 Identities=13% Similarity=0.050 Sum_probs=71.9
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCC-CcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLE-DCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+...||+.++|+.+. +.++|+|++...++..+++.++.. .+|+..+..+......
T Consensus 58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~---------------------- 115 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKD---------------------- 115 (204)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEET----------------------
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEEC----------------------
Confidence 466799999999997 779999999999999999999987 4788776655432100
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
..+..-++.+|.++++||+|+|+..-+.+....|+...
T Consensus 116 ------------------------g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 116 ------------------------GVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp ------------------------TEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECC
T ss_pred ------------------------CeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEee
Confidence 01233466788999999999999988877777776544
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0011 Score=67.04 Aligned_cols=138 Identities=13% Similarity=0.059 Sum_probs=80.7
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+....-+..+.+.+|+.... +..+..... .. ...+.+...+.+.-.
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~---~~~~~~~~~------g~-~~~~~~el~~~~~~~ 604 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI---YNAERLGLG------GG-GDMPGSEVYDFVEAA 604 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC---CCSSSSSSC------BC-CCGGGGGGGTTTTTT
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc---cCccceeec------Cc-ccCCHHHHHHHHhhC
Confidence 57899999998885 899999999999999999999986321 001110000 00 000000000011100
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
..+++. .+..|..+++.+.++ | +.++++||+.||..|.+.|++.. .++.+.. +..+|+++.
T Consensus 605 ~V~arv-----------~P~~K~~iV~~Lq~~-g---~~Vam~GDGvNDapaLk~AdvGI-Amg~gtd~ak~aADiVl~~ 668 (920)
T 1mhs_A 605 DGFAEV-----------FPQHKYNVVEILQQR-G---YLVAMTGDGVNDAPSLKKADTGI-AVEGSSDAARSAADIVFLA 668 (920)
T ss_dssp SCEESC-----------CSTHHHHHHHHHHTT-T---CCCEECCCCGGGHHHHHHSSEEE-EETTSCHHHHHSSSEEESS
T ss_pred eEEEEe-----------CHHHHHHHHHHHHhC-C---CeEEEEcCCcccHHHHHhCCcCc-ccccccHHHHHhcCeEEcC
Confidence 111111 123455566555443 3 67999999999999999999864 4455443 445788874
Q ss_pred -CHhHHHHHhH
Q 036723 254 -SIHNIKEALP 263 (290)
Q Consensus 254 -sl~el~~~l~ 263 (290)
++..+.+++.
T Consensus 669 ~~~~~I~~ai~ 679 (920)
T 1mhs_A 669 PGLGAIIDALK 679 (920)
T ss_dssp CCSHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 4666665543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0013 Score=67.50 Aligned_cols=49 Identities=12% Similarity=0.186 Sum_probs=36.9
Q ss_pred CcEEEEcCCccchHHHHhcCCeEEEec-CCCC--CCCcceeecC--HhHHHHHhH
Q 036723 214 RKTIFFDDSIRNLETGKRLGLHTVWVG-TSHR--AEGVDYALES--IHNIKEALP 263 (290)
Q Consensus 214 ~e~i~iGDs~~Di~~a~~aGi~~i~v~-~~~~--~~~ad~v~~s--l~el~~~l~ 263 (290)
+.++++||+.||+.|.+.|++..+ ++ ++.. +..+|+++.+ +..+.+++.
T Consensus 715 ~~V~~iGDG~ND~paLk~AdvGIA-mg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 715 AIVAVTGDGVNDSPALKKADIGVA-MGISGSDVSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp CCEEEEECSGGGHHHHHHSSEEEE-ESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred CEEEEEcCCcchHHHHHhCCceEE-eCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence 679999999999999999998654 44 3443 4458888755 776766654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.00095 Score=56.70 Aligned_cols=46 Identities=15% Similarity=0.000 Sum_probs=36.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDD----SIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGD----s~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+..|..+++.+ +|++++++++||| +.||++|.+.+|...+.++++.
T Consensus 186 ~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~ 235 (246)
T 2amy_A 186 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPE 235 (246)
T ss_dssp TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHH
T ss_pred CCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCC
Confidence 45667888887 8999999999999 9999999999997667776543
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0014 Score=50.05 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=24.4
Q ss_pred ccEEEEecCCCcccCCC------ChHHHHHHHHHHHHHHHcCCCcc
Q 036723 15 YDCLLFDLDDTIYPLTS------GLSKEVTKNIQEYMLQKLCIEEA 54 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~------~~~~~~~~~i~~~~~~~~g~~~~ 54 (290)
+|+|+||+||||+++.. .+.+...+++++ +...|+...
T Consensus 1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~--l~~~Gi~~~ 44 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLRE--YHQLGFEIV 44 (126)
T ss_dssp CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHH--HHHTTCEEE
T ss_pred CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHH--HHhCCCeEE
Confidence 47999999999998654 233455555555 233455443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.007 Score=62.24 Aligned_cols=38 Identities=18% Similarity=0.346 Sum_probs=32.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE 137 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~ 137 (290)
++.|++.+.++.++ ++++++|+.....+..+.+.+|+.
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 56788888888875 889999999999998888888874
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.00014 Score=61.96 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=27.1
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQE 43 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~ 43 (290)
.|++|+|+||+||||++....+.+...+++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~ 34 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQK 34 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence 35689999999999999777788888888877
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0017 Score=50.85 Aligned_cols=39 Identities=15% Similarity=0.009 Sum_probs=23.2
Q ss_pred CCccEEEEecCCCcccCCC----ChHHHHHHHHHHHHHHHcCCCc
Q 036723 13 QKYDCLLFDLDDTIYPLTS----GLSKEVTKNIQEYMLQKLCIEE 53 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~----~~~~~~~~~i~~~~~~~~g~~~ 53 (290)
|.+|+|+||+||||++... ...+...+++++ +...|...
T Consensus 1 m~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~--l~~~G~~i 43 (142)
T 2obb_A 1 SNAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKL--LQQEKHRL 43 (142)
T ss_dssp -CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHH--HHHTTCEE
T ss_pred CCCeEEEEECcCCCCCCCCccccccCHHHHHHHHH--HHHCCCEE
Confidence 3478999999999998442 112344455555 33445433
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0027 Score=54.46 Aligned_cols=31 Identities=29% Similarity=0.426 Sum_probs=25.8
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQE 43 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~ 43 (290)
.++|+|+||+||||++....+.+...++|++
T Consensus 11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~ 41 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQK 41 (262)
T ss_dssp --CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred cCeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence 3589999999999999877788888888887
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0016 Score=65.87 Aligned_cols=136 Identities=12% Similarity=0.058 Sum_probs=77.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCc-ce-eEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDC-FE-RIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~-f~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
++.|++.+.++.|+ ++++++|+....-+..+.+.+|+... ++ ..+...+.. . ........+++.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~----------~-~~~~~~l~~~~~ 556 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKD----------A-NLASIPVEELIE 556 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGG----------T-TSCCSCHHHHHH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccc----------c-ccchhHHHHHHh
Confidence 46889988888775 88999999999989899999998531 10 011110000 0 000000000000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL 252 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~ 252 (290)
-...+++. .+..|...++.+.++ | +.++|+||+.||..|.+.|++..++ +.+.. +..+|+++
T Consensus 557 ~~~v~arv-----------~P~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADivl 620 (885)
T 3b8c_A 557 KADGFAGV-----------FPEHKYEIVKKLQER-K---HIVGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVL 620 (885)
T ss_dssp TSCCEECC-----------CHHHHHHHHHHHHHT-T---CCCCBCCCSSTTHHHHHHSSSCCCC-SSSHHHHGGGCSSCC
T ss_pred hCcEEEEE-----------CHHHHHHHHHHHHHC-C---CeEEEEcCCchhHHHHHhCCEeEEe-CCccHHHHHhcceee
Confidence 00001100 023345555555443 3 6799999999999999999986443 44433 44578876
Q ss_pred cC--HhHHHHHh
Q 036723 253 ES--IHNIKEAL 262 (290)
Q Consensus 253 ~s--l~el~~~l 262 (290)
.+ +..+.+++
T Consensus 621 ~~~~~~~I~~ai 632 (885)
T 3b8c_A 621 TEPGLSVIISAV 632 (885)
T ss_dssp SSCSHHHHTHHH
T ss_pred ccCchhHHHHHH
Confidence 54 55555444
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=95.00 E-value=0.11 Score=44.09 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=62.5
Q ss_pred CcEEEEeCCchHHHHHHHHhcCCCCcc--eeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCC
Q 036723 114 IRKVIFTNADKTHAARVLSRLGLEDCF--ERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRT 191 (290)
Q Consensus 114 ~~~~ivT~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (290)
...+++|++.-.-.-.++-.+++...| ++|+++-.+
T Consensus 177 ~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~ki------------------------------------------ 214 (274)
T 3geb_A 177 CVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKT------------------------------------------ 214 (274)
T ss_dssp EEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTT------------------------------------------
T ss_pred eeEEEEecCchHHHHHHHHHhhcccceecccccchhhc------------------------------------------
Confidence 346888888665555555567777766 568887533
Q ss_pred CCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 192 PVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
.|.+.|+.+.+++| +.-..++|||+.---++|+..+++++-+..
T Consensus 215 -----GKesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 215 -----GKESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp -----CHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCCEEECCS
T ss_pred -----CHHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCCeEEeec
Confidence 35799999999998 557799999999999999999999887743
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=94.70 E-value=0.017 Score=48.77 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=21.8
Q ss_pred ccEEEEecCCCcccC-----CCChHHHHHHHHHH
Q 036723 15 YDCLLFDLDDTIYPL-----TSGLSKEVTKNIQE 43 (290)
Q Consensus 15 ~k~viFDlDGTL~d~-----~~~~~~~~~~~i~~ 43 (290)
+|+|+||+||||++. ...+.+...+++++
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~ 34 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISD 34 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHH
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHH
Confidence 579999999999983 33566677777777
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=94.34 E-value=0.014 Score=49.37 Aligned_cols=14 Identities=36% Similarity=0.290 Sum_probs=12.8
Q ss_pred EEEEecCCCcccCC
Q 036723 17 CLLFDLDDTIYPLT 30 (290)
Q Consensus 17 ~viFDlDGTL~d~~ 30 (290)
+|+||+||||++..
T Consensus 5 li~~DlDGTLl~~~ 18 (244)
T 1s2o_A 5 LLISDLDNTWVGDQ 18 (244)
T ss_dssp EEEECTBTTTBSCH
T ss_pred EEEEeCCCCCcCCH
Confidence 99999999999954
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=92.15 E-value=0.041 Score=50.93 Aligned_cols=49 Identities=22% Similarity=0.291 Sum_probs=41.6
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC-ccee-EEeec
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED-CFER-IISFE 147 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~-i~~~~ 147 (290)
+...||+.++|+.+. +.++|+|.+...++..+++.++... +|.. +++.+
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd 134 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRD 134 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTT
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEec
Confidence 567899999999997 7799999999999999999998876 6765 55544
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=86.02 E-value=0.42 Score=43.42 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=26.3
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHH--HcCCCc
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQ--KLCIEE 53 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~--~~g~~~ 53 (290)
+|.|+||+|||+++ .+..+....-++.+++.. ++|++.
T Consensus 1 ~~~~~fdvdgv~~~-~~~~~d~~~ltv~~~l~~~~~~~~~~ 40 (384)
T 1qyi_A 1 MKKILFDVDGVFLS-EERCFDVSALTVYELLMDKCYLGLHS 40 (384)
T ss_dssp CCEEEECSBTTTBC-SHHHHHHHHHHHHHHHHCTTTTCCSC
T ss_pred CceEEEecCceeec-hhhhccHHHHHHHHHHcCccccCCCc
Confidence 47999999999999 655555556566664433 356544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 290 | ||||
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 4e-08 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 2e-07 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-07 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 1e-06 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 4e-06 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 5e-06 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 7e-06 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 7e-06 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 2e-05 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 2e-05 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 4e-05 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 6e-05 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 3e-04 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 7e-04 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 0.001 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 0.002 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 0.003 |
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.6 bits (119), Expect = 4e-08
Identities = 31/249 (12%), Positives = 64/249 (25%), Gaps = 26/249 (10%)
Query: 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA 72
Y L D++ T+ P++ V + + Y K+ L +
Sbjct: 1 DNYSTYLLDIEGTVCPISF-----VKETLFPYFTNKVP-----------QLVQQDTRDSP 44
Query: 73 GLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLS 132
+ I QF D+ L + + L + K
Sbjct: 45 -VSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAI 103
Query: 133 RLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTP 192
I + S +L + + D++ Y D
Sbjct: 104 DFIKRKKRVFIY---SSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYI-----DGYFDINT 155
Query: 193 VVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVD-YA 251
K +++ + + + +F D+ L+ +G+ T A D
Sbjct: 156 SGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQK 215
Query: 252 LESIHNIKE 260
+ N +
Sbjct: 216 YQVYKNFET 224
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 48.3 bits (113), Expect = 2e-07
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254
KP + F + P ++I +DS ++ K G + VG +
Sbjct: 144 SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPD 203
Query: 255 IHNIK-EALPELWE 267
+ E L E+W
Sbjct: 204 TSHYTLEFLKEVWL 217
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 48.3 bits (114), Expect = 4e-07
Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTD 153
++L+P ++ LL L I T T LGL FE
Sbjct: 212 IILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA------T 265
Query: 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP 213
VL ++ RP + Y A R ++ +N
Sbjct: 266 ASDVLEAENMYPQARPLGKPNPFSYI---AALYGNNRDKYESYINKQDN-------IVNK 315
Query: 214 RKTIFFDDSIRNLETGKRLGLHTVWVGTSHR---------AEGVDYALESIHNIKEALPE 264
DS+ +L + +++G + T + A DY + + ++ L
Sbjct: 316 DDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDN 375
Query: 265 LWE 267
L E
Sbjct: 376 LLE 378
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 46.4 bits (108), Expect = 1e-06
Identities = 9/83 (10%), Positives = 28/83 (33%), Gaps = 10/83 (12%)
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH----------R 244
KP + F ++P + + +DS+ + + G+ + +
Sbjct: 140 VKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLT 199
Query: 245 AEGVDYALESIHNIKEALPELWE 267
G + + + ++ + + E
Sbjct: 200 DAGAETVISRMQDLPAVIAAMAE 222
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 44.6 bits (104), Expect = 4e-06
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALE 253
+ KP + K ++ ++++ D + +++ GKR GL W+ A +A+
Sbjct: 127 MRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIR 186
Query: 254 SIHNIKEALPELWEVA 269
+ + E L +L
Sbjct: 187 PLRDSSE-LGDLLAAI 201
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 44.4 bits (103), Expect = 5e-06
Identities = 8/45 (17%), Positives = 19/45 (42%)
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KP +++ V ++ + P + +F + ++ K G V
Sbjct: 146 FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV 190
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.3 bits (101), Expect = 7e-06
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254
FE++ + + +FFDD RN+ RLG+ + + + + LE+
Sbjct: 97 PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLET 156
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (102), Expect = 7e-06
Identities = 34/257 (13%), Positives = 70/257 (27%), Gaps = 25/257 (9%)
Query: 16 DCLLFDLDDTIYPLTS---GLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA 72
+L D++ T P+ L + +N++EY+ EE + + L
Sbjct: 8 TVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD 67
Query: 73 GLRAI------GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTH 126
G I G + V M L L R K
Sbjct: 68 GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 127
Query: 127 AARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADL 186
+ + + + + + + L+ ++E + + D
Sbjct: 128 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD--------- 178
Query: 187 ELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV---GTSH 243
T + K E++ ++ + +F D R + +H V G +
Sbjct: 179 ----TKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAG 234
Query: 244 RAEGVDYALESIHNIKE 260
+ I + E
Sbjct: 235 LTDDEKTYYSLITSFSE 251
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 42.5 bits (98), Expect = 2e-05
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-----RAEGVD 249
KP + + ++P + +DS+ + K + ++ V R +
Sbjct: 143 SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLAN 202
Query: 250 YALESIHNI 258
L S+ +
Sbjct: 203 VKLSSLTEL 211
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.4 bits (98), Expect = 2e-05
Identities = 33/248 (13%), Positives = 71/248 (28%), Gaps = 31/248 (12%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAI 77
FDLD + ++ ++ + L + + A Y+ + +
Sbjct: 3 AAFDLDGVL--ALPSIAGAFRRSEEALALPRDFLLGA---------YQTEFPEGPTEQLM 51
Query: 78 GYQFDCDDFHSYVHGRLP-YMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGL 136
+ + + + N +S + + + + L
Sbjct: 52 KGKITFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKK 111
Query: 137 EDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCK 196
+ I++ L+ DK L S+ L + K
Sbjct: 112 KGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMI--------------K 157
Query: 197 PFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIH 256
P + + + P + +F DD NL+ + +G+ T+ V H LE +
Sbjct: 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV---HNTASALRELEKVT 214
Query: 257 NIKEALPE 264
+ PE
Sbjct: 215 GTQ--FPE 220
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 41.7 bits (96), Expect = 4e-05
Identities = 31/225 (13%), Positives = 67/225 (29%), Gaps = 48/225 (21%)
Query: 19 LFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIG 78
+FDL + I + ++ L L + + E + + A A+
Sbjct: 4 IFDLGNVIVDIDFNRVLGAWSDLTRIPLASL-KKSFHMGEAFHQHERGEISDEAFAEALC 62
Query: 79 YQFDCDDFHSYVHGRLPYMMLKPDP---VLRNLLLSLPIRKVIFTNADKTHAARVLSRL- 134
++ + + + P + + L R V+ +N ++ H
Sbjct: 63 HEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP 122
Query: 135 GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVV 194
+ D + I + +
Sbjct: 123 EIRDAADHIYLSQD-------------------------------------------LGM 139
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KP ++ V + +P T+FFDD+ N+E +LG+ ++ V
Sbjct: 140 RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 41.0 bits (94), Expect = 6e-05
Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254
KP EA + +N T + D ++E + G+ ++ S ++ +++
Sbjct: 136 RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES--TYEGNHRIQA 193
Query: 255 IHNIKEALP 263
+ +I
Sbjct: 194 LADISRIFE 202
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (89), Expect = 3e-04
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRA 245
KP + ++ + +P + +F DD NL+ + LG+ T+ V + A
Sbjct: 159 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 208
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 37.4 bits (85), Expect = 7e-04
Identities = 32/230 (13%), Positives = 57/230 (24%), Gaps = 52/230 (22%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG 73
KY ++DL T+ + E + L
Sbjct: 2 KYHDYIWDLGGTLLD-----NYETSTAAFVETLALY------------------------ 32
Query: 74 LRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSR 133
G D D + + P+ + P L N F K + AR L
Sbjct: 33 ----GITQDHDSVYQALKVSTPFAIETFAPNLEN-----------FLEKYKENEARELEH 77
Query: 134 LGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPV 193
L + ++ + V D + +
Sbjct: 78 PILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTS------SSGF 131
Query: 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243
KP E+ + + I+ + D ++E G+ GL T +
Sbjct: 132 KRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHLFTSIV 179
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 37.2 bits (84), Expect = 0.001
Identities = 29/264 (10%), Positives = 71/264 (26%), Gaps = 58/264 (21%)
Query: 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG 73
++ + FDLD T+ L+ + +++ L + +
Sbjct: 3 QFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWA 62
Query: 74 LRAIGYQFDCDDFHSYVHGRLPYM------MLKPDPVLRNLLLSLPIRKVIFTNA---DK 124
+ + D+F + Y + + P ++ L +L + I
Sbjct: 63 CKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPT 122
Query: 125 THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184
H +L+ G++ F ++
Sbjct: 123 KHVQPILTAFGIDHLFSEMLG--------------------------------------- 143
Query: 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244
++ KP F + + P++ +F DS ++ G V + +
Sbjct: 144 ----GQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYN 199
Query: 245 ------AEGVDYALESIHNIKEAL 262
D+ + +I +
Sbjct: 200 YNIPIAQSKPDWIFDDFADILKIT 223
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 36.0 bits (81), Expect = 0.002
Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRA----EGVDY 250
KP + N+ P+ +F DS+ + +T + + + V +
Sbjct: 136 RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAH 195
Query: 251 ALESIHNIKE 260
+ +I E
Sbjct: 196 RFQKPLDILE 205
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 36.0 bits (81), Expect = 0.003
Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 206 FKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH----RAEGVDYALESIHNIKEA 261
K D+ +++ K LG+ ++ + + D+ + + + +
Sbjct: 166 KKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKI 225
Query: 262 LPEL 265
+ EL
Sbjct: 226 VDEL 229
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 290 | |||
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.95 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.95 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.94 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.94 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.94 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.94 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.94 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.93 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.93 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.92 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.91 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.85 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.84 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.84 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.8 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.79 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.76 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.76 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.74 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.74 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.72 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.72 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.71 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.71 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.7 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.69 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.67 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.57 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.52 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.37 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.37 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.23 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.21 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.19 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.18 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.12 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.06 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.94 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.79 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.76 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.74 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.63 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.55 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.48 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.47 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.31 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.27 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.22 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.16 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.1 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.71 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.43 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 97.22 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.48 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 88.68 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 81.93 | |
| d2nn4a1 | 62 | Hypothetical protein YqgQ {Bacillus subtilis [TaxI | 80.98 |
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.96 E-value=1.3e-29 Score=212.25 Aligned_cols=196 Identities=16% Similarity=0.217 Sum_probs=150.7
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-HHHHcCCC-CCHHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-GLRAIGYQ-FDCDDFHSYV 90 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~~ 90 (290)
|++|+|+||+||||+|+...+..++. ..+.++|.+.... ...+.++.... .+...+.. ...+.+.+.+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~-----~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMR-----EVLATYGKPFSPA-----QAQKTFPMAAEQAMTELGIAASEFDHFQAQY 70 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHH-----HHHHTTTCCCCHH-----HHHHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHH-----HHHHHcCCCCCHH-----HHHHHhcchhhhhhhccccchhhHHHHHHHh
Confidence 67999999999999997666666555 3566677765542 33333444332 22222211 1223333333
Q ss_pred hhcCC--CCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 91 HGRLP--YMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 91 ~~~~~--~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
.+... ...+.++||+.++|+.|+ ++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------- 135 (207)
T d2hdoa1 71 EDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK--------------- 135 (207)
T ss_dssp HHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC---------------
T ss_pred hhhhcccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccc---------------
Confidence 32221 245788999999999996 77899999999999999999999999999999988775
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
+||+|.+++.+++++|++|++|++|||+.+|+.+|+++|+.++++.+|..
T Consensus 136 ----------------------------~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~ 187 (207)
T d2hdoa1 136 ----------------------------RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPN 187 (207)
T ss_dssp ----------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTT
T ss_pred ----------------------------chhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCCh
Confidence 79999999999999999999999999999999999999999999976653
Q ss_pred --CCCcceeecCHhHHHHH
Q 036723 245 --AEGVDYALESIHNIKEA 261 (290)
Q Consensus 245 --~~~ad~v~~sl~el~~~ 261 (290)
...++++++++.||.++
T Consensus 188 ~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 188 ADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp GGGSCCSEEESSGGGGGGG
T ss_pred hHhhhcCcEeCCHHHHHhh
Confidence 45689999999998764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.95 E-value=1.3e-27 Score=201.12 Aligned_cols=199 Identities=17% Similarity=0.276 Sum_probs=147.9
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH---------HHHHcCCCCC
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA---------GLRAIGYQFD 82 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~ 82 (290)
|.++|+|+||+||||+|+.+.+..++. ..++++|.+......+.. ..+.... ..........
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSIN-----SALKDVNLPQASENLVMT----WIGNGADVLSQRAVDWACKQAEKELT 71 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHH-----HHHHHTTCCCCCHHHHHH----HCSSCHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHH-----HHHHHCCCCCCcHHHHHH----Hhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 456999999999999996665555555 356667776554332211 1111111 0011111122
Q ss_pred HHHHHHH------HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCC
Q 036723 83 CDDFHSY------VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTD 153 (290)
Q Consensus 83 ~~~~~~~------~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~ 153 (290)
...+... ...........++|++.++|+.|+ ++++++||..+..+..+++.+|+..+|+.+++++..+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-- 149 (224)
T d2hsza1 72 EDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE-- 149 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS--
T ss_pred HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc--
Confidence 2211111 111112245678999999999985 78999999999999999999999999999999998776
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
.||+|+.++.++++++++++++++|||+.+|+.+|+++|
T Consensus 150 -----------------------------------------~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG 188 (224)
T d2hsza1 150 -----------------------------------------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAG 188 (224)
T ss_dssp -----------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHT
T ss_pred -----------------------------------------ccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcC
Confidence 799999999999999999999999999999999999999
Q ss_pred CeEEEecCCCC------CCCcceeecCHhHHHHHh
Q 036723 234 LHTVWVGTSHR------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 234 i~~i~v~~~~~------~~~ad~v~~sl~el~~~l 262 (290)
+.+|++.++.. ..+|+++++++.||.+++
T Consensus 189 ~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 189 CAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp CEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred CeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 99999987653 446899999999998765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=3.5e-27 Score=197.16 Aligned_cols=196 Identities=16% Similarity=0.225 Sum_probs=146.2
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCC-CCCH----HHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGY-QFDC----DDF 86 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~----~~~ 86 (290)
|.++|+|+||+||||+|+...+..++.+ .+.+.|++......+. ...+........... .... ..+
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTIR----GFMGPPLESSFATCLSKDQISEAVQIY 71 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHHHH----HTSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HhhhcchhhhccccccchhhHHHHHHH
Confidence 4569999999999999976666665553 4455677655443222 222332222211111 1111 112
Q ss_pred HHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccc
Q 036723 87 HSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDAS 164 (290)
Q Consensus 87 ~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 164 (290)
...+.... .....++|++.++|+.|+ .+++++||++....+..++++|+..+|+.++++++.
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~--------------- 135 (210)
T d2ah5a1 72 RSYYKAKG-IYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE--------------- 135 (210)
T ss_dssp HHHHHHTG-GGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS---------------
T ss_pred HHHHHhhh-hhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhccccccccccccccc---------------
Confidence 22222222 235678999999999985 778999999999999999999999999999987653
Q ss_pred cCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 165 ESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
+||+|+.++.+++++|++|+++++|||+.+|+.+|+++|++++++.+|..
T Consensus 136 ------------------------------~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~ 185 (210)
T d2ah5a1 136 ------------------------------APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFG 185 (210)
T ss_dssp ------------------------------CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSS
T ss_pred ------------------------------ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCC
Confidence 58999999999999999999999999999999999999999999988763
Q ss_pred ------CCCcceeecCHhHHHHHh
Q 036723 245 ------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 ------~~~ad~v~~sl~el~~~l 262 (290)
..+|+++++++.||.++|
T Consensus 186 ~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 186 EQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp CHHHHHTTCCSEEESSTTHHHHHT
T ss_pred CHHHHHhCCCCEEECCHHHHHHHh
Confidence 457999999999998865
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.94 E-value=3.4e-27 Score=200.39 Aligned_cols=124 Identities=21% Similarity=0.350 Sum_probs=113.7
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
+.++||+.++|+.|+ ++++++||++.......++.+|+..+|+.++++++.+.
T Consensus 99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~------------------------- 153 (230)
T d1x42a1 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGF------------------------- 153 (230)
T ss_dssp CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTB-------------------------
T ss_pred CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccccccc-------------------------
Confidence 567899999999986 78999999999999999999999999999999998875
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC----CCCccee
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----AEGVDYA 251 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----~~~ad~v 251 (290)
+||+|++|+.+++++|++|++|++|||+. +|+.+|+++|+.++++.++.. ...++++
T Consensus 154 ------------------~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~ 215 (230)
T d1x42a1 154 ------------------FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFI 215 (230)
T ss_dssp ------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEE
T ss_pred ------------------cchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEE
Confidence 79999999999999999999999999996 899999999999999976543 4478999
Q ss_pred ecCHhHHHHHhHHH
Q 036723 252 LESIHNIKEALPEL 265 (290)
Q Consensus 252 ~~sl~el~~~l~~~ 265 (290)
++|+.||.++|.+|
T Consensus 216 i~~l~el~~~l~~l 229 (230)
T d1x42a1 216 VSDLREVIKIVDEL 229 (230)
T ss_dssp ESSTTHHHHHHHHH
T ss_pred ECCHHHHHHHHHHc
Confidence 99999999999875
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=3.3e-27 Score=198.44 Aligned_cols=193 Identities=13% Similarity=0.160 Sum_probs=139.7
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcC-CCCCHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIG-YQFDCDDFH 87 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~-~~~~~~~~~ 87 (290)
++|+|+||+||||+|+...+..++. + +...+|++...... +.+..+...... .... .......+.
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~----~-~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAEL----D-VMASLGVDISRRNE----LPDTLGLRIDMVVDLWYARQPWNGPSRQEVV 72 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHH----H-HHHHTTCCGGGGGG----SCCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred cceEEEECCCCcccCCHHHHHHHHH----H-HHHHcCCCCCHHHH----HHHHhCCCccchhhhhhhcccccchhHHHHH
Confidence 5899999999999996454444444 2 45566766443211 111111111100 1111 111122222
Q ss_pred HH----HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 88 SY----VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 88 ~~----~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+. ....+ .....++||+.++|+.|+ ++++|+||+++..+...++++|+..+|+.++++++++.
T Consensus 73 ~~~~~~~~~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~--------- 142 (218)
T d1te2a_ 73 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY--------- 142 (218)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC---------
T ss_pred HHHHHHHHHhh-hccccccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc---------
Confidence 21 11111 123467899999999885 88999999999999999999999999999999998775
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||+|+.|+.+++++|++|++|++|||+.+|+.+|+++|+.+|++.
T Consensus 143 ----------------------------------~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~ 188 (218)
T d1te2a_ 143 ----------------------------------SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVP 188 (218)
T ss_dssp ----------------------------------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred ----------------------------------chhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEEC
Confidence 7999999999999999999999999999999999999999999997
Q ss_pred CCCC-----CCCcceeecCHhHHH
Q 036723 241 TSHR-----AEGVDYALESIHNIK 259 (290)
Q Consensus 241 ~~~~-----~~~ad~v~~sl~el~ 259 (290)
++.. ...|+++++++.||.
T Consensus 189 ~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 189 APEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp CTTTTTCGGGGGSSEECSCGGGCC
T ss_pred CCCCccchhhcCCCEEECChhhCC
Confidence 7643 356899999999973
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.94 E-value=5.1e-27 Score=198.89 Aligned_cols=205 Identities=13% Similarity=0.139 Sum_probs=149.1
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCccc---------HHHHHHHHHHHHcccHHHHHHcCCCCCHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAK---------VPELCVSLYKFYGTTLAGLRAIGYQFDCD 84 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 84 (290)
+.|+|+||+||||+++...+..++.+++.+. .+..... .........+..+......... +....+
T Consensus 1 ~~klviFD~DGTL~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 75 (228)
T d2hcfa1 1 SRTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADK-FDKAKE 75 (228)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHH-HHHHHH
T ss_pred CceEEEEeCCCCcccCHHHHHHHHHHHHHHH----cCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHH-HHHHHH
Confidence 3689999999999997777777776555552 2221111 1112223333333332221110 011122
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 85 DFHSYVHGRLPYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
.+...+.+......+.++||+.++|+.|+ ++++++||+....+...++.+|+..+|+.++++++...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--------- 146 (228)
T d2hcfa1 76 TYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD--------- 146 (228)
T ss_dssp HHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS---------
T ss_pred HHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccccccccccccc---------
Confidence 33444444444456788999999999884 46789999999999999999999999999999887654
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc---CCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA---NINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~---~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
.||+|..+...+..+ +++|++|++|||+.+|+.+|+++|+.+|
T Consensus 147 ----------------------------------~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i 192 (228)
T d2hcfa1 147 ----------------------------------RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSI 192 (228)
T ss_dssp ----------------------------------GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEE
T ss_pred ----------------------------------ccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEE
Confidence 689988877666655 7899999999999999999999999999
Q ss_pred EecCCCC------CCCcceeecCHhHHHHHhHHHH
Q 036723 238 WVGTSHR------AEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 238 ~v~~~~~------~~~ad~v~~sl~el~~~l~~~~ 266 (290)
++.++.. ..+|+++++++.||.++|..|+
T Consensus 193 ~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 193 AVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp EECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred EEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 9987653 5579999999999999998874
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=9e-27 Score=194.08 Aligned_cols=192 Identities=17% Similarity=0.262 Sum_probs=139.7
Q ss_pred cEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHc--CCCCCHHHHHHHHhh
Q 036723 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAI--GYQFDCDDFHSYVHG 92 (290)
Q Consensus 16 k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~--~~~~~~~~~~~~~~~ 92 (290)
++++||+||||+|+...+..++.+ ...++|.+.... .....+. +...... ... ....+.+.+......
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKE-KVREFIF---KYSVQDLLVRVAEDRNLDVEVLNQVRAQ 72 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHH-HHHHHHH---HSCHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred EEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHH-HHHHhhc---ccccccccccccchhhhhHHHHHHHHHH
Confidence 699999999999976666655552 455667765432 1111111 1111111 110 111223323222222
Q ss_pred cC--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCC
Q 036723 93 RL--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESE 167 (290)
Q Consensus 93 ~~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~ 167 (290)
.. ....+.++||+.++|+.|+ ++++|+||+.. ....+++++|+..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~---------------- 135 (204)
T d2go7a1 73 SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFV---------------- 135 (204)
T ss_dssp HHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCC----------------
T ss_pred HHHhhcccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccc----------------
Confidence 11 1245788999999999885 88999999876 45668999999999999999987765
Q ss_pred CCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCC
Q 036723 168 RPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEG 247 (290)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ 247 (290)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.+|++.++. ..
T Consensus 136 ---------------------------~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~--~~ 186 (204)
T d2go7a1 136 ---------------------------RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST--YE 186 (204)
T ss_dssp ---------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS--CT
T ss_pred ---------------------------cchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC--CC
Confidence 7999999999999999999999999999999999999999999998775 45
Q ss_pred cceeecCHhHHHHHh
Q 036723 248 VDYALESIHNIKEAL 262 (290)
Q Consensus 248 ad~v~~sl~el~~~l 262 (290)
+++.++++.||.+++
T Consensus 187 ~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 187 GNHRIQALADISRIF 201 (204)
T ss_dssp TEEECSSTTHHHHHT
T ss_pred cCeecCCHHHHHHHh
Confidence 788899999988765
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=6.9e-26 Score=193.83 Aligned_cols=126 Identities=17% Similarity=0.360 Sum_probs=111.6
Q ss_pred CCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 97 MMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
....++||+.++|+.|+ ++++++||++.......++.+|+..+|+.++++++.+.
T Consensus 106 ~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~----------------------- 162 (247)
T d2gfha1 106 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKE----------------------- 162 (247)
T ss_dssp HTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSS-----------------------
T ss_pred ccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhcccccccccccccccccc-----------------------
Confidence 34678999999999886 77899999999999999999999999999999998775
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEE-EecCCCC-----CCC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTV-WVGTSHR-----AEG 247 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i-~v~~~~~-----~~~ 247 (290)
+||+|++|+.+++++|++|++|++|||+. +|+.+|+++|+.++ ++..... ...
T Consensus 163 --------------------~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~ 222 (247)
T d2gfha1 163 --------------------EKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPM 222 (247)
T ss_dssp --------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCC
T ss_pred --------------------chhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCC
Confidence 79999999999999999999999999997 89999999999855 5544332 456
Q ss_pred cceeecCHhHHHHHhHHH
Q 036723 248 VDYALESIHNIKEALPEL 265 (290)
Q Consensus 248 ad~v~~sl~el~~~l~~~ 265 (290)
|++++.++.||.++|.++
T Consensus 223 p~~~i~~l~eL~~ll~~i 240 (247)
T d2gfha1 223 PHYMVSSVLELPALLQSI 240 (247)
T ss_dssp CSEEESSGGGHHHHHHHH
T ss_pred CCEEECCHHHHHHHHHHH
Confidence 899999999999998875
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.94 E-value=3e-26 Score=197.54 Aligned_cols=126 Identities=13% Similarity=0.222 Sum_probs=112.5
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc-eeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF-ERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
....++||+.++|+.|+ ++++++||.++..+...++++|+..+| |.++++++...
T Consensus 96 ~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~--------------------- 154 (257)
T d1swva_ 96 RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA--------------------- 154 (257)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC---------------------
T ss_pred ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc---------------------
Confidence 34678999999999985 789999999999999999999999877 77888887765
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhcCCeEEEecCCCC-------
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR------- 244 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~------- 244 (290)
+||+|+.|..+++++|+. +++|++|||+.+|+.+|+++|+.+|++.+|..
T Consensus 155 ----------------------~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~ 212 (257)
T d1swva_ 155 ----------------------GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEE 212 (257)
T ss_dssp ----------------------CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHH
T ss_pred ----------------------cccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHH
Confidence 799999999999999995 58999999999999999999999999988753
Q ss_pred ----------------------CCCcceeecCHhHHHHHhHHH
Q 036723 245 ----------------------AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 245 ----------------------~~~ad~v~~sl~el~~~l~~~ 265 (290)
..+|||+++++.||.++|..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 213 EVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 235999999999999988875
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=2.1e-26 Score=193.98 Aligned_cols=201 Identities=14% Similarity=0.227 Sum_probs=146.5
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH-cccHHH-----HHHcCCCCCHHHH-
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY-GTTLAG-----LRAIGYQFDCDDF- 86 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~-g~~~~~-----~~~~~~~~~~~~~- 86 (290)
.+|+||||+||||+|+...+..++. + .++++|++.... .+.+.+ |..... ....+.......+
T Consensus 1 ~~kaviFD~DGtL~dt~~~~~~a~~----~-~~~~~g~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 70 (222)
T d2fdra1 1 GFDLIIFDCDGVLVDSEIIAAQVES----R-LLTEAGYPISVE-----EMGERFAGMTWKNILLQVESEASIPLSASLLD 70 (222)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHH----H-HHHHTTCCCCHH-----HHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHH
T ss_pred CceEEEECCCCcccCCHHHHHHHHH----H-HHHHcCCCCCHH-----HHHHHHhhhccccccccccccccccccccchh
Confidence 3799999999999996554554444 2 566677765432 111111 222221 1122333222222
Q ss_pred --HHHHhhcCCCCCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEe-ecccCCCCCCcccccccc
Q 036723 87 --HSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIIS-FETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 87 --~~~~~~~~~~~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~-~~~~~~~~~~~~~~~~~~ 163 (290)
...+..... ....++||+.++|+.|+.+.+++|+.....+...++++++..+|+.++. .++.+..
T Consensus 71 ~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~----------- 138 (222)
T d2fdra1 71 KSEKLLDMRLE-RDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD----------- 138 (222)
T ss_dssp HHHHHHHHHHH-HHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT-----------
T ss_pred HHHHHHHHHhh-hccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeeccccccccc-----------
Confidence 222222221 3467899999999999999999999999999999999999999987554 4432210
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
..||+|+.|..+++++|++|++|++|||+..|+.+|+++|+.+|++.++.
T Consensus 139 ------------------------------~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~ 188 (222)
T d2fdra1 139 ------------------------------RVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGAS 188 (222)
T ss_dssp ------------------------------CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred ------------------------------ccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCC
Confidence 26999999999999999999999999999999999999999999998775
Q ss_pred C----------CCCcceeecCHhHHHHHhHHHH
Q 036723 244 R----------AEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 244 ~----------~~~ad~v~~sl~el~~~l~~~~ 266 (290)
. ..+|+++++++.||.++|..+-
T Consensus 189 ~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l~ 221 (222)
T d2fdra1 189 HTYPSHADRLTDAGAETVISRMQDLPAVIAAMA 221 (222)
T ss_dssp TCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHT
T ss_pred CCCcchHHHHHhCCCCEEECCHHHHHHHHHHhc
Confidence 3 2369999999999999887753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.93 E-value=7.2e-25 Score=186.68 Aligned_cols=126 Identities=19% Similarity=0.390 Sum_probs=113.9
Q ss_pred CCCCCChhHHHHHHcCC-CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 97 MMLKPDPVLRNLLLSLP-IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~-~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
....++|++.+.|+.|+ ..++++||+....+...+..+++..+|+.++++++.+.
T Consensus 90 ~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~------------------------ 145 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV------------------------ 145 (245)
T ss_dssp GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC------------------------
T ss_pred cccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhcccccccccccccccccc------------------------
Confidence 44688999999999987 77899999999999999999999999999999998875
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----------
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR----------- 244 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~----------- 244 (290)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++||++||+.++..
T Consensus 146 -------------------~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~ 206 (245)
T d1qq5a_ 146 -------------------FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGT 206 (245)
T ss_dssp -------------------CTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSS
T ss_pred -------------------cCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccc
Confidence 79999999999999999999999999999999999999999999975420
Q ss_pred -----------------CCCcceeecCHhHHHHHhHHH
Q 036723 245 -----------------AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 245 -----------------~~~ad~v~~sl~el~~~l~~~ 265 (290)
...||++++++.||.+++..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 207 IAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp CCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred cccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence 346999999999999988753
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.93 E-value=3.1e-26 Score=192.81 Aligned_cols=201 Identities=17% Similarity=0.236 Sum_probs=139.9
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH-cccHHH-----HHHcCCCCCHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY-GTTLAG-----LRAIGYQFDCDDFH 87 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~-g~~~~~-----~~~~~~~~~~~~~~ 87 (290)
|||+|+||+||||+|+...+..++. .++..+|++..... +...+ +..... ....+.....+.+.
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~-----~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWK-----ALAEEIGINGVDRQ-----FNEQLKGVSREDSLQKILDLADKKVSAEEFK 70 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHH-----HHHHHTTCCCCCHH-----HHTTTTTCCHHHHHHHHHTTSSSCCCHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHH-----HHHHHcCCCCChHH-----HHHHHhhccchhhhhhccccccccchhhhhh
Confidence 5899999999999995444444444 25566676654421 11111 111110 11112223333332
Q ss_pred H-------HHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCc
Q 036723 88 S-------YVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGT 156 (290)
Q Consensus 88 ~-------~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~ 156 (290)
+ .+.+.+. .....++||+.++|+.|+ ++++++||... ....++.+++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~----- 143 (221)
T d1o08a_ 71 ELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAA----- 143 (221)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSS-----
T ss_pred hHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccccccccccc-----
Confidence 1 2222221 234678999999999886 67888887644 5778999999999999999887765
Q ss_pred cccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE
Q 036723 157 VLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++|+.+
T Consensus 144 --------------------------------------~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~ 185 (221)
T d1o08a_ 144 --------------------------------------SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALP 185 (221)
T ss_dssp --------------------------------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred --------------------------------------cccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEE
Confidence 799999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCcceeecCHhHH-HHHhHHHHHhh
Q 036723 237 VWVGTSHRAEGVDYALESIHNI-KEALPELWEVA 269 (290)
Q Consensus 237 i~v~~~~~~~~ad~v~~sl~el-~~~l~~~~~~~ 269 (290)
|++++++....++.+++++.++ .+.|.++|..+
T Consensus 186 i~v~~~~~~~~~~~~~~~~~~~~~~~l~el~~~~ 219 (221)
T d1o08a_ 186 IGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWLQK 219 (221)
T ss_dssp EEESCHHHHCSSSEEESSGGGCCHHHHHHHHHSS
T ss_pred EEECChhhcccccEEcCCcccCCHHHHHHHHHhc
Confidence 9999876555556666666553 35566666654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.92 E-value=5.3e-25 Score=184.71 Aligned_cols=121 Identities=19% Similarity=0.382 Sum_probs=109.0
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...++|++.++++.++ ++++++||+........+.+.++..+||.++++++.+.
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~----------------------- 147 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV----------------------- 147 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC-----------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec-----------------------
Confidence 3567788888888775 78999999999999999999999999999999998875
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----CCCcc
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-----AEGVD 249 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-----~~~ad 249 (290)
.||+|+.|+.+++++|++|++|++|||+..|+.+|+++|+.+||+.++.. ...||
T Consensus 148 --------------------~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d 207 (220)
T d1zrna_ 148 --------------------YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPD 207 (220)
T ss_dssp --------------------CTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCS
T ss_pred --------------------cccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCC
Confidence 79999999999999999999999999999999999999999999976543 44589
Q ss_pred eeecCHhHHHHH
Q 036723 250 YALESIHNIKEA 261 (290)
Q Consensus 250 ~v~~sl~el~~~ 261 (290)
++++++.||.++
T Consensus 208 ~~i~~l~el~~l 219 (220)
T d1zrna_ 208 WEVTSLRAVVEL 219 (220)
T ss_dssp EEESSHHHHHTT
T ss_pred EEECCHHHHHhh
Confidence 999999999875
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.91 E-value=2.5e-24 Score=177.28 Aligned_cols=173 Identities=15% Similarity=0.159 Sum_probs=125.2
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCC--CCCHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGY--QFDCDDFHSY 89 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~--~~~~~~~~~~ 89 (290)
|++|+|+||+||||+|+...+..++. + .++.+|++.... ..++..+...... ..... ....+.+.+.
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~----~-~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFV----E-TLALYGITQDHD-----SVYQALKVSTPFAIETFAPNLENFLEKYKEN 70 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHH----H-HHHHTTCCCCHH-----HHHHHHHHCHHHHHHHHCTTCTTHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHH----H-HHHHcCCCccHH-----HHHhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence 67999999999999996555555444 2 556778765442 2222333322211 11111 1112223332
Q ss_pred HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 90 VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 90 ~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
..... ....++||+.++|+.|+ ++++++||......+ .++++++..+|+.+++++++..
T Consensus 71 ~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~~~l~~~fd~i~~~~~~~~--------------- 132 (187)
T d2fi1a1 71 EAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKTSIAAYFTEVVTSSSGFK--------------- 132 (187)
T ss_dssp HHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHTTCGGGEEEEECGGGCCC---------------
T ss_pred HHHHh--hcCcccchhHHHHHHHHhhhccccccccCccchhh-hhhhhccccccccccccccccc---------------
Confidence 33333 45688999999998775 889999998776654 7899999999999999988765
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.||+|+.|+.++++++++ ++++|||+.+|+++|+++|++++++.+++
T Consensus 133 ----------------------------~KP~p~~~~~~~~~~~~~--~~l~vgDs~~Di~aA~~aG~~~i~v~~~~ 179 (187)
T d2fi1a1 133 ----------------------------RKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV 179 (187)
T ss_dssp ----------------------------CTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred ----------------------------cCCCHHHHHHHHHHcCCC--CeEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 799999999999999874 59999999999999999999999997643
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2.5e-23 Score=176.41 Aligned_cols=119 Identities=11% Similarity=0.109 Sum_probs=101.7
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEee-cccCCCCCCccccccccccCCCCCcc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISF-ETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
....++||+.++|..|+ ++++++||++.......+.+.++..+|+..... +....
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------------- 182 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG--------------------- 182 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC---------------------
T ss_pred cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc---------------------
Confidence 45678999999999984 889999999999999999999998888764433 33332
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC------CC
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR------AE 246 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~------~~ 246 (290)
+||+|.+|+.+++++|++|++|+||||+.+|+.+|+++|+.+|++.++.. ..
T Consensus 183 ----------------------~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~ 240 (253)
T d1zs9a1 183 ----------------------HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEK 240 (253)
T ss_dssp ----------------------CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHH
T ss_pred ----------------------cCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhc
Confidence 79999999999999999999999999999999999999999999976543 23
Q ss_pred CcceeecCHhHH
Q 036723 247 GVDYALESIHNI 258 (290)
Q Consensus 247 ~ad~v~~sl~el 258 (290)
.++.+++|+.||
T Consensus 241 ~~~~~i~sl~EL 252 (253)
T d1zs9a1 241 TYYSLITSFSEL 252 (253)
T ss_dssp HHSCEESSGGGC
T ss_pred CCCcEECChHHh
Confidence 467889999886
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=5.9e-21 Score=159.52 Aligned_cols=117 Identities=9% Similarity=0.155 Sum_probs=93.6
Q ss_pred CCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHH-----------HHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 97 MMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARV-----------LSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~-----------l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
....+++++.+++..++ ..++.++......... +..+|+..+|+.+++++...
T Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~--------------- 157 (225)
T d2g80a1 94 IKAPVYADAIDFIKRKK-RVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG--------------- 157 (225)
T ss_dssp CCBCCCHHHHHHHHHCS-CEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC---------------
T ss_pred ccccchhhHHHHHhhHH-hhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC---------------
Confidence 34577899999998775 3466777655444332 46678889999999887544
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR- 244 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~- 244 (290)
.||+|.+|+.+++++|++|++|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 158 -----------------------------~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~ 208 (225)
T d2g80a1 158 -----------------------------KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNA 208 (225)
T ss_dssp -----------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSC
T ss_pred -----------------------------CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCC
Confidence 59999999999999999999999999999999999999999999986543
Q ss_pred ---CCCcceeecCHhHH
Q 036723 245 ---AEGVDYALESIHNI 258 (290)
Q Consensus 245 ---~~~ad~v~~sl~el 258 (290)
...+..++++++||
T Consensus 209 ~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 209 PVPDGQKYQVYKNFETL 225 (225)
T ss_dssp CCCSSCCSCEESCSTTC
T ss_pred CCcccCCCCccCChhhC
Confidence 33456678888775
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.6e-21 Score=162.50 Aligned_cols=103 Identities=20% Similarity=0.257 Sum_probs=88.0
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchH----HHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKT----HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~----~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
...++|++.++|..|+ ++++++||+... .........++..+||.++++++++.
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~------------------- 157 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM------------------- 157 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC-------------------
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecccccc-------------------
Confidence 3567899999999885 789999987544 33344455677889999999998876
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+++|++.++.
T Consensus 158 ------------------------~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~ 206 (225)
T d1zd3a1 158 ------------------------VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTD 206 (225)
T ss_dssp ------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred ------------------------chhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence 7999999999999999999999999999999999999999999997643
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=8.2e-22 Score=165.02 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=91.2
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCC----chHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNA----DKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~----~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
...++|++.++|..|+ ++++++||+ ........+..+++..+||.++++++++.
T Consensus 95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~------------------- 155 (222)
T d1cr6a1 95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM------------------- 155 (222)
T ss_dssp TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSC-------------------
T ss_pred cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccC-------------------
Confidence 4578999999999996 778999974 34455666778899999999999998875
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++|+.+++++|++|++|+||||+.+|+.+|+++|+.+|+|.++.
T Consensus 156 ------------------------~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 156 ------------------------IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTA 204 (222)
T ss_dssp ------------------------CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred ------------------------CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence 7999999999999999999999999999999999999999999997755
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.80 E-value=8.3e-20 Score=147.15 Aligned_cols=99 Identities=18% Similarity=0.255 Sum_probs=87.3
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchH-HHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKT-HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~-~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
+.+.++||+.++|+.|+ ++++++||+... .....++.+++..+|+.+...
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------------------- 96 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-------------------------- 96 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES--------------------------
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc--------------------------
Confidence 45789999999999986 889999987664 556678999998888777553
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.||+|..+..+++++|++|++|++|||+..|+++|+++|+.+|++.+|.
T Consensus 97 ----------------------~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~ 145 (164)
T d1u7pa_ 97 ----------------------PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGM 145 (164)
T ss_dssp ----------------------SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCC
T ss_pred ----------------------cCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC
Confidence 5999999999999999999999999999999999999999999998875
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=4.8e-21 Score=155.84 Aligned_cols=102 Identities=23% Similarity=0.423 Sum_probs=90.3
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc-CCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL-GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~-gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..+.+++.+++..++ ++++++||+........+..+ ++..+|+.++++++.+.
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~----------------------- 139 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM----------------------- 139 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC-----------------------
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccc-----------------------
Confidence 467888988887774 788999998887777777765 78889999999988775
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++|+.+|++.++.
T Consensus 140 --------------------~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 140 --------------------RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp --------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred --------------------cccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 7999999999999999999999999999999999999999999997654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=6.2e-20 Score=157.59 Aligned_cols=66 Identities=18% Similarity=0.259 Sum_probs=59.2
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHH
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIK 259 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~ 259 (290)
.+||+|.+++.+++++|++|++|+||||++ +||.+|+++||.+|+|.+|.. ...||++++|+.||.
T Consensus 174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 379999999999999999999999999998 699999999999999987742 345899999999863
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.76 E-value=1.2e-18 Score=146.29 Aligned_cols=139 Identities=13% Similarity=0.052 Sum_probs=98.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee-EEeecccCCCCCCccccccccccCCCCCccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER-IISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
.+++.||+.++++.|+ ++++++|++.+..++.+++++++..+|.. .+..+.-.. . .
T Consensus 73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------~--~ 132 (226)
T d2feaa1 73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------H--I 132 (226)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------E--E
T ss_pred ccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------e--e
Confidence 3578899999999986 88999999999999999999988765532 111110000 0 0
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC----CCCCcc
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH----RAEGVD 249 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~----~~~~ad 249 (290)
. .+. +.+..-+++++.....+++++++++++++|||||.+|++||++||+.+ ++++.. ....+.
T Consensus 133 ~----~~~-------~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~-a~~~~~~~~~~~~~~~ 200 (226)
T d2feaa1 133 D----WPH-------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF-ARDYLLNECREQNLNH 200 (226)
T ss_dssp E----CTT-------CCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE-ECHHHHHHHHHTTCCE
T ss_pred c----ccc-------ccccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE-EecchHHHHHHcCCCe
Confidence 0 000 001112577888899999999999999999999999999999999744 333221 133456
Q ss_pred eeecCHhHHHHHhHHHHHh
Q 036723 250 YALESIHNIKEALPELWEV 268 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~~~~ 268 (290)
..++++.|+...|.++.+.
T Consensus 201 ~~~~d~~~i~~~l~~~~~~ 219 (226)
T d2feaa1 201 LPYQDFYEIRKEIENVKEV 219 (226)
T ss_dssp ECCSSHHHHHHHHHTSHHH
T ss_pred eecCCHHHHHHHHHHHHHH
Confidence 7789999998888776554
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=3.6e-18 Score=139.78 Aligned_cols=69 Identities=17% Similarity=0.299 Sum_probs=62.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE-EEecCCCC-----CCCcceeecCHhHHHHHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT-VWVGTSHR-----AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~-i~v~~~~~-----~~~ad~v~~sl~el~~~l~ 263 (290)
+||+|.++..+++++++++++++||||+.+|+++|++||+.+ +++.+++. ...|+++++++.|+.++|.
T Consensus 107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ik 181 (182)
T d2gmwa1 107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIK 181 (182)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHH
T ss_pred cCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHhc
Confidence 799999999999999999999999999999999999999975 66776654 3459999999999999875
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.74 E-value=8.6e-19 Score=150.61 Aligned_cols=65 Identities=17% Similarity=0.294 Sum_probs=58.3
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHH
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNI 258 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el 258 (290)
++||+|.+|+.+++++|++|++|+||||++ +||.+|+++||.+|+|.+|.. ...||++++|+.|+
T Consensus 178 ~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 178 IGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred eccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 479999999999999999999999999998 599999999999999987642 33579999999885
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.72 E-value=3.3e-18 Score=143.15 Aligned_cols=68 Identities=19% Similarity=0.364 Sum_probs=57.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeec---CHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALE---SIHNIKEAL 262 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~---sl~el~~~l 262 (290)
+||+|.++..+++++|+++++++||||+.+|+++|++||+.++++.+++....+++... ++.++.+++
T Consensus 128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~~~~e~~dll 198 (209)
T d2o2xa1 128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLL 198 (209)
T ss_dssp STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHH
T ss_pred ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCccchhHHHHHH
Confidence 69999999999999999999999999999999999999999999988876555555544 455555544
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.72 E-value=3.7e-18 Score=140.50 Aligned_cols=132 Identities=17% Similarity=0.243 Sum_probs=96.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
...+.+++.++++.+. ...+++|+.............+....+......+.......
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 132 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD-------------------- 132 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEE--------------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccccc--------------------
Confidence 3567788988888875 67889999999999999999988877766555443321000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~s 254 (290)
. .... ..+++++..+..++++++++++++++||||.||+.|++.||++.++.+.+.-+..|++++++
T Consensus 133 ---~------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~Ad~vi~~ 199 (210)
T d1j97a_ 133 ---V------EGEV----LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEK 199 (210)
T ss_dssp ---E------ECSS----CSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTCSEEECS
T ss_pred ---c------cccc----cccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhCCEEEcC
Confidence 0 0000 01678899999999999999999999999999999999999976552222225679999985
Q ss_pred --HhHHHHHh
Q 036723 255 --IHNIKEAL 262 (290)
Q Consensus 255 --l~el~~~l 262 (290)
+++|.++|
T Consensus 200 ~d~~~vl~~l 209 (210)
T d1j97a_ 200 RDLREILKYI 209 (210)
T ss_dssp SCGGGGGGGC
T ss_pred CCHHHHHHHh
Confidence 45666544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.71 E-value=2.7e-17 Score=140.96 Aligned_cols=65 Identities=15% Similarity=0.342 Sum_probs=58.4
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHH
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNI 258 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el 258 (290)
.+||+|.+|+.+++++|++|++|+||||++ +||++|+++|+++++|.+|.. ...||++++|+.|+
T Consensus 178 ~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred ecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 379999999999999999999999999998 699999999999999977642 34589999999986
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.71 E-value=6.8e-18 Score=145.25 Aligned_cols=68 Identities=15% Similarity=0.300 Sum_probs=62.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~~~l 262 (290)
+||+|.+++.+++++|++|++++||||++ +||.+|+++|+.+|||.+|.. ...|||+++++.||.++|
T Consensus 184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 69999999999999999999999999997 699999999999999988753 346899999999999876
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.70 E-value=1.2e-17 Score=151.84 Aligned_cols=137 Identities=21% Similarity=0.286 Sum_probs=107.7
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee--EEeecccCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER--IISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
++|.||+.++|+.|+ ++++++||.+...+..+++++|+..+|+. +++.+++.....
T Consensus 214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~------------------- 274 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAEN------------------- 274 (380)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHH-------------------
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhh-------------------
Confidence 457789999999886 89999999999999999999999999875 555554210000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH--------------cCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKI--------------ANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~--------------~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
........+||+|+.+..++.. ++.++++|+||||+.+|+.+|+++|+.+|++
T Consensus 275 -------------~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv 341 (380)
T d1qyia_ 275 -------------MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGT 341 (380)
T ss_dssp -------------HSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred -------------hccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEE
Confidence 0000011279999999988764 4567899999999999999999999999999
Q ss_pred cCCCC---------CCCcceeecCHhHHHHHhHHHHH
Q 036723 240 GTSHR---------AEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 240 ~~~~~---------~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
.+|.. ..+||++++++.||.++|..+++
T Consensus 342 ~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 342 LTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp SCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred ecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 87653 23799999999999999877654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=2.2e-18 Score=138.37 Aligned_cols=106 Identities=17% Similarity=0.293 Sum_probs=75.4
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLV 159 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 159 (290)
.+.++||+.++|+.|+ ++++++||.+. ......+...|+. ++.++.+......
T Consensus 28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~~------- 98 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPAD------- 98 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGG-------
T ss_pred HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeeccccccc-------
Confidence 4577899999998885 88999999641 1233445555554 4444433222210
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 160 DQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
. +..+||+|.+++.+++++|++|++++||||+.+|+++|+++|++++++
T Consensus 99 ---------------------------~----~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i 147 (161)
T d2fpwa1 99 ---------------------------E----CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRY 147 (161)
T ss_dssp ---------------------------C----CSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEEC
T ss_pred ---------------------------c----ccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEE
Confidence 0 012699999999999999999999999999999999999999999999
Q ss_pred cCCC
Q 036723 240 GTSH 243 (290)
Q Consensus 240 ~~~~ 243 (290)
++..
T Consensus 148 ~~~~ 151 (161)
T d2fpwa1 148 DRET 151 (161)
T ss_dssp BTTT
T ss_pred CCCC
Confidence 7765
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.1e-17 Score=140.52 Aligned_cols=127 Identities=11% Similarity=0.144 Sum_probs=86.9
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEee----cccCCCCCCccccccccccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISF----ETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
.+.++||+.++++.|+ ++++++|++....++.+++.+|+..+ .+++. +..+...+
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~an~~~~~~~G~~~g---------------- 141 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKFYFNGEYAG---------------- 141 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEECTTSCEEE----------------
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceeeeeeeeeehhcccc----------------
Confidence 4678899999999986 88999999999999999999998743 22221 11000000
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC---CCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR---AEG 247 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~---~~~ 247 (290)
+ ..+.|..-++.+...++.+.+++ ++++|++||||.+|+.|++.+|+.+++-..... ...
T Consensus 142 --~-------------~~~~p~~~~~~K~~~v~~~~~~~--~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ 204 (217)
T d1nnla_ 142 --F-------------DETQPTAESGGKGKVIKLLKEKF--HFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDN 204 (217)
T ss_dssp --E-------------CTTSGGGSTTHHHHHHHHHHHHH--CCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHH
T ss_pred --c-------------eeeeeeeccchHHHHHHHHHhcc--CccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHh
Confidence 0 00000011344667777776654 468899999999999999999987544333332 345
Q ss_pred cceeecCHhHHH
Q 036723 248 VDYALESIHNIK 259 (290)
Q Consensus 248 ad~v~~sl~el~ 259 (290)
+++++.++.||.
T Consensus 205 ad~~i~~f~ell 216 (217)
T d1nnla_ 205 AKWYITDFVELL 216 (217)
T ss_dssp CSEEESCGGGGC
T ss_pred CCCEeCCHHHhc
Confidence 899999988863
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.57 E-value=2.8e-15 Score=122.66 Aligned_cols=127 Identities=11% Similarity=0.086 Sum_probs=90.5
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.+...++....+..++ ...+++|.+...........++....+............ .
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------------------~ 124 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV----------------------V 124 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCE----------------------E
T ss_pred hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccccc----------------------c
Confidence 3456667777666554 678899999999999999888877655544433221110 0
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCccee-e
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYA-L 252 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v-~ 252 (290)
....+++...+..++++++++++|++|||+.||++|++.||+..++ +.+.. +..++++ .
T Consensus 125 -----------------~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~ 186 (206)
T d1rkua_ 125 -----------------GYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAV 186 (206)
T ss_dssp -----------------EEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEE
T ss_pred -----------------cccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCHHHHHhCCCceee
Confidence 0134445666788999999999999999999999999999997665 55433 4456775 5
Q ss_pred cCHhHHHHHhHH
Q 036723 253 ESIHNIKEALPE 264 (290)
Q Consensus 253 ~sl~el~~~l~~ 264 (290)
++.+|+.+.|.+
T Consensus 187 ~~~~d~~~~~~~ 198 (206)
T d1rkua_ 187 HTYEDLKREFLK 198 (206)
T ss_dssp CSHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 779998887765
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.52 E-value=1.6e-14 Score=120.19 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCH--hHHHHHhHHHHHhhC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESI--HNIKEALPELWEVAG 270 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl--~el~~~l~~~~~~~~ 270 (290)
+.+++.+++.+++++|++++++++|||+.||+.|++.+|++ +.++++.. +..|++++++. +.+.+++.++++..|
T Consensus 150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~-vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l~~~g 228 (230)
T d1wr8a_ 150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQAPKILKENADYVTKKEYGEGGAEAIYHILEKFG 228 (230)
T ss_dssp TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHHHHTT
T ss_pred CcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeE-EEECCCCHHHHHhCCEEECCCCcCHHHHHHHHHHHHcC
Confidence 68889999999999999999999999999999999999985 55555543 55689999774 457888888887654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.37 E-value=2.2e-13 Score=113.88 Aligned_cols=68 Identities=7% Similarity=0.023 Sum_probs=53.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCH--hHHHHHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESI--HNIKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl--~el~~~l~ 263 (290)
+..+..+++.+++++|++++++++||||.||+.|++.+|. .+.++++.. +..|++++++- +.+.+.|.
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~-~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVR-KACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSE-EEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCe-EEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 3566899999999999999999999999999999999997 455655443 45689988664 44444443
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.37 E-value=2.1e-13 Score=106.70 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=40.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 195 CKPFEEAFEQVFKIANINPRK-TIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e-~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
..|+......+++++..++.+ +++|||+..|+++|+++|++++.|.+|
T Consensus 99 ~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 99 TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred cCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 466777778888887776666 467899999999999999999999876
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=5.5e-11 Score=101.21 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=62.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHHHhh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELWEVA 269 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~~~~ 269 (290)
+--|..+++.+++++|++++++++||||.||++|.+.+|..+ .++++.. +..|++++.+.++ +.+.|.++++..
T Consensus 188 ~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~v-am~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~ 265 (269)
T d1rlma_ 188 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSF-AMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT 265 (269)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE-ECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEE-EeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence 456789999999999999999999999999999999999854 4555443 5678999988665 888898888755
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.21 E-value=2.7e-11 Score=103.91 Aligned_cols=70 Identities=17% Similarity=0.136 Sum_probs=55.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHh--HHHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIH--NIKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~--el~~~l~~~ 265 (290)
+-.|..+++.+++++|++++++++|||+.||+.|++.+|.. +.++++.. +..|++++.+.+ -+.+.|.++
T Consensus 211 ~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~s-vam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 211 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred cchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeE-EEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 45678999999999999999999999999999999999975 56655543 566889988754 355555543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=1.5e-12 Score=111.26 Aligned_cols=68 Identities=13% Similarity=0.159 Sum_probs=54.5
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHH
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPE 264 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~ 264 (290)
--|..+++.++++++++++++++|||+.||+.|++.+|.. +.++++.. +..|++++.+..+ +.+.|.+
T Consensus 196 ~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~-~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~ 267 (271)
T d1rkqa_ 196 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAVDNAIPSVKEVANFVTKSNLEDGVAFAIEK 267 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcE-EEeCCCCHHHHHhCCEEcCCCCcChHHHHHHH
Confidence 4567999999999999999999999999999999999975 45555443 5568888887665 5555554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.18 E-value=2.1e-12 Score=110.59 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=57.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+-.|..+++.+++++|++++++++|||+.||+.|++.+|.. +.++++.. +..|++++.+.++ +.++|.++
T Consensus 188 ~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~s-va~~na~~~~k~~A~~i~~~~~~~Gva~~i~~l 261 (267)
T d1nf2a_ 188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENAIEKVKEASDIVTLTNNDSGVSYVLERI 261 (267)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTSCHHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred CCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcE-EEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHH
Confidence 45678999999999999999999999999999999999985 56655543 5668999988665 55555543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.12 E-value=1.1e-10 Score=99.54 Aligned_cols=73 Identities=11% Similarity=0.148 Sum_probs=58.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH---HHHHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN---IKEALPELWEV 268 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e---l~~~l~~~~~~ 268 (290)
+.-+..+++.++++++++++++++|||+.||+.|++.+|.. +.++++.. +..|++++.+-.+ +.+++.++++.
T Consensus 205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~-va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcE-EEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence 56678999999999999999999999999999999999975 55555544 5567898865432 77888877753
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.06 E-value=1.7e-10 Score=97.98 Aligned_cols=68 Identities=16% Similarity=0.309 Sum_probs=54.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~ 263 (290)
+-.|..+++.+++++|++++++++|||+.||+.|.+.+|. ++.++++.. +..|++++.+.++ +.+.|.
T Consensus 184 ~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 184 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence 4678899999999999999999999999999999999998 466666543 5567899888543 444443
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.94 E-value=2.2e-09 Score=89.17 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=49.9
Q ss_pred CCCcHHHHHHHHHHc-CCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIA-NINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~-~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l 262 (290)
+-.+..+++.+++++ ++.++++++|||+.||++|.+.+|.. +.++++..+ ..-.+.++.|+.+++
T Consensus 177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~-va~~Na~~~--~~~~~~~i~~~~~~i 242 (243)
T d1wzca1 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLKHK--KAQNVSSIIDVLEVI 242 (243)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCCCT--TCEEESCHHHHHHHH
T ss_pred hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcE-EEeCCCChH--HHhhhhHHHHHHHhh
Confidence 466789999999998 48899999999999999999999974 555555422 233466777777654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=2e-09 Score=88.55 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=38.0
Q ss_pred CCCcHHHHHHHHH---HcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 195 CKPFEEAFEQVFK---IANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 195 ~Kp~~~~~~~il~---~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+..|..+.+.+++ ++|++++++++|||+.||++|.+.+|. .|+|.+
T Consensus 182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n 230 (232)
T d1xvia_ 182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG 230 (232)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence 4566777777776 468999999999999999999999997 566644
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.76 E-value=7.7e-09 Score=84.73 Aligned_cols=65 Identities=9% Similarity=0.029 Sum_probs=51.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~ 265 (290)
+-.|..+++.+++ .+++++|||+.||+.|++.+|.. +.+..+..+..|++++++.+|+.++|..|
T Consensus 157 g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~-~av~~g~~~~~A~~~~~~~~ev~~~l~~l 221 (229)
T d1u02a_ 157 GVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDA-LTIKVGEGETHAKFHVADYIEMRKILKFI 221 (229)
T ss_dssp TCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTS-EEEEESSSCCCCSEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCe-EEEEeCCCCccCeEEcCCHHHHHHHHHHH
Confidence 4667788888775 36899999999999999999864 34444455678999999999998877664
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.74 E-value=2.7e-08 Score=85.84 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=41.6
Q ss_pred HHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC
Q 036723 83 CDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED 138 (290)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~ 138 (290)
.+.+.+.+.+ ..+.+.||+.++++.|+ ++++|+|+|....++.+++++|+..
T Consensus 122 ~~~i~~~v~~----~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~ 176 (291)
T d2bdua1 122 KAKLKEIVAD----SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH 176 (291)
T ss_dssp GGGHHHHHHH----SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHh----cCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCc
Confidence 4444444433 34678899999999996 8999999999999999999998763
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.63 E-value=6.9e-08 Score=77.26 Aligned_cols=111 Identities=18% Similarity=0.199 Sum_probs=83.1
Q ss_pred HHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCC
Q 036723 106 RNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185 (290)
Q Consensus 106 ~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (290)
...|+..++.++++|......+......+++...+ ..
T Consensus 41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~----~~--------------------------------------- 77 (177)
T d1k1ea_ 41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF----LG--------------------------------------- 77 (177)
T ss_dssp HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEE----ES---------------------------------------
T ss_pred HHHHhhhcEEEEEecCCchhHHHHHHhhhcccccc----cc---------------------------------------
Confidence 45556677889999999999998888888865322 11
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHh---HHHH
Q 036723 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIH---NIKE 260 (290)
Q Consensus 186 ~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~---el~~ 260 (290)
.+++...++.+++++|+++++|+||||+.||+++.+.+|+. +.+.++.. +..+++|+++-. -++|
T Consensus 78 ---------~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~s-iap~nA~~~vk~~A~~Vt~~~GG~GavrE 147 (177)
T d1k1ea_ 78 ---------KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTS-FAVADAPIYVKNAVDHVLSTHGGKGAFRE 147 (177)
T ss_dssp ---------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTSSEECSSCTTTTHHHH
T ss_pred ---------cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeE-EEcCCccHHHHHhCCEEeCCCCCCchHHH
Confidence 36777899999999999999999999999999999999985 44444443 667899988822 2344
Q ss_pred HhHHHHHhh
Q 036723 261 ALPELWEVA 269 (290)
Q Consensus 261 ~l~~~~~~~ 269 (290)
+...+++..
T Consensus 148 ~~e~il~~~ 156 (177)
T d1k1ea_ 148 MSDMILQAQ 156 (177)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHC
Confidence 444445444
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.55 E-value=1.1e-08 Score=85.33 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=41.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+.-|..+++.+++++|++++++++|||+.||+.|.+.+|. .+.++++.
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~-~vav~na~ 207 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNAQ 207 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTCC
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCc-EEEeCCCC
Confidence 4567899999999999999999999999999999999996 55665544
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=8.1e-08 Score=78.31 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=61.7
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchH---HHHHHH-HhcCCCC--cceeEEeecccCCCCCCccccccccccCCCC
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKT---HAARVL-SRLGLED--CFERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~---~~~~~l-~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
..|.||+.++++.++ .+++.+||.... ....-+ +.+|+.. .-+.++....-
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~-------------------- 144 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP-------------------- 144 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT--------------------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC--------------------
Confidence 457899999999885 889999997533 223334 4477642 22333433211
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.|.. -+..++++++ ++++||..+|+.+|+++|+..|-+-+.
T Consensus 145 -------------------------~K~~---rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r~ 185 (209)
T d2b82a1 145 -------------------------GQNT---KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRA 185 (209)
T ss_dssp -------------------------TCCC---SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred -------------------------CchH---HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEeecc
Confidence 1222 2233466887 899999999999999999999988544
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=1e-08 Score=84.49 Aligned_cols=30 Identities=27% Similarity=0.356 Sum_probs=27.0
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQE 43 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~ 43 (290)
..|+++||+||||++....+.+...+++++
T Consensus 2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~ 31 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQKITKEMDDFLQK 31 (243)
T ss_dssp CSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred CCEEEEEcCcCCeeCCCCcCCHHHHHHHHH
Confidence 478999999999999888888888888888
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.31 E-value=9.4e-07 Score=71.21 Aligned_cols=46 Identities=15% Similarity=0.092 Sum_probs=36.8
Q ss_pred EEEcCCccchHHHHhcCCeEEEecCCCCCC---C-cceeecCHhHHHHHh
Q 036723 217 IFFDDSIRNLETGKRLGLHTVWVGTSHRAE---G-VDYALESIHNIKEAL 262 (290)
Q Consensus 217 i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~---~-ad~v~~sl~el~~~l 262 (290)
++|+|++..+..+..+|+.++....+++.. . .-..+.++.|+.+.+
T Consensus 140 ~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~i 189 (195)
T d1q92a_ 140 LLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAI 189 (195)
T ss_dssp EEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHH
T ss_pred EEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHHH
Confidence 799999999999999999999998888643 2 235688888876544
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.27 E-value=2.9e-06 Score=76.68 Aligned_cols=129 Identities=12% Similarity=0.023 Sum_probs=78.3
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc---------CCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL---------GLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~---------gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
.+...|.+..+|++|+ .+++++||.+..++...+..+ ...++||.|++...=. .+.....+
T Consensus 183 Yv~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP-------~FF~~~~~ 255 (458)
T d2bdea1 183 YVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKP-------RFFYDNLR 255 (458)
T ss_dssp SEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHH-------HHHHSCCC
T ss_pred hhcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCC-------CccCCCCc
Confidence 3456888999998886 679999999999988777653 3346899988743210 01110000
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-hcCCeEEEecCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGK-RLGLHTVWVGTS 242 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~-~aGi~~i~v~~~ 242 (290)
+ .++.+-.+.+ ...+...++.+..- .-...+.+.+|....+++||||++ .||..++ ..||.|++|-.-
T Consensus 256 ~---~~v~~~~g~l---~~~~~~~~~~vY~g---Gn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 256 F---LSVNPENGTM---TNVHGPIVPGVYQG---GNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp E---EEECTTTCCE---EECCSCCCSEEEEE---CCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred c---eEEeCCCCcc---ccCCccccCCcccc---CCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence 0 0011111111 11111111111222 235566777899999999999999 8988775 589999999553
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=1.2e-07 Score=77.61 Aligned_cols=46 Identities=9% Similarity=-0.067 Sum_probs=36.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCc----cchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSI----RNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~----~Di~~a~~aGi~~i~v~~~~ 243 (290)
+..|..+++.+++ .+++++++|||+. ||++|.+.+|...+.|+++.
T Consensus 183 ~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~ 232 (244)
T d2fuea1 183 GWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQ 232 (244)
T ss_dssp TCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHH
T ss_pred hccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHH
Confidence 4555688888764 5889999999976 99999999997677776543
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.16 E-value=1.5e-06 Score=70.16 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=39.2
Q ss_pred CCCcHHHHHHHHHHcC----CCCCcEEEEcCC-----------------ccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIAN----INPRKTIFFDDS-----------------IRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~----~~~~e~i~iGDs-----------------~~Di~~a~~aGi~~i 237 (290)
+||++.++..++++++ ++.++++||||. .+|++.|+++|+++.
T Consensus 115 RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 115 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp STTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred CCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 7999999999999985 889999999994 489999999999865
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.10 E-value=1.2e-05 Score=60.91 Aligned_cols=107 Identities=16% Similarity=0.176 Sum_probs=69.9
Q ss_pred CCChhHHHHHHcC---CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSL---PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.| +++++++|+.....+..+-+.+|+...| ..
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~----~~------------------------------ 66 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI----AE------------------------------ 66 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE----CS------------------------------
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc----cc------------------------------
Confidence 3456777776666 4889999999999999888999985433 11
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~-- 252 (290)
-.|+--..+.++++.. ..++|+||+.||..+.+.+++.. .++.+.. +..+|.++
T Consensus 67 --------------------~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgi-a~~~~~~~~~~aADivl~~ 124 (135)
T d2b8ea1 67 --------------------VLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGI-AVGSGSDVAVESGDIVLIR 124 (135)
T ss_dssp --------------------CCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEE-EECCC--------SEEESS
T ss_pred --------------------cchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeee-ecCccCHHHHHhCCEEEEC
Confidence 1123333444555433 57999999999999999999864 4444433 55688887
Q ss_pred cCHhHHHHHh
Q 036723 253 ESIHNIKEAL 262 (290)
Q Consensus 253 ~sl~el~~~l 262 (290)
+++..|.+++
T Consensus 125 ~~l~~i~~aI 134 (135)
T d2b8ea1 125 DDLRDVVAAI 134 (135)
T ss_dssp CCTHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 4466666544
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.71 E-value=7.3e-06 Score=67.29 Aligned_cols=143 Identities=18% Similarity=0.183 Sum_probs=86.1
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCC-----
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPT----- 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 170 (290)
.+++.||+.+.|+.++ .+.+|+|..-+.++++..++.|+. +. .++.+ +. .+....+.+...
T Consensus 79 ~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~-~~--------lD~~~~p~ee~e~ll~i 146 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR--GE-LHGTE-VD--------FDSIAVPEGLREELLSI 146 (308)
T ss_dssp HCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEB-CC--------GGGCCCCHHHHHHHHHH
T ss_pred ceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC--ce-eeccc-cc--------ccccCCChHHHHHHHHH
Confidence 4688899999999997 778999999999999999999985 44 32221 11 111222222222
Q ss_pred ----------cccc-ccccCCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc----CC
Q 036723 171 ----------ELFD-IDDYCSRPNADLELPRTPVVC-KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL----GL 234 (290)
Q Consensus 171 ----------~~~~-~~~~~~~~~~~~~~~~~~~~~-Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a----Gi 234 (290)
+++. +...+++++....+-.=..+| .-+..+.+.++...++++. ++||||.+|+++.+.+ |+
T Consensus 147 ~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~r~~gGl 224 (308)
T d1y8aa1 147 IDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAARGLGGV 224 (308)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHHHHTTCE
T ss_pred hhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHHHHHhcCCCe
Confidence 2222 122244444322111100112 3445677777888888774 9999999999988764 55
Q ss_pred eEEEecCCCCCCCcceeecC
Q 036723 235 HTVWVGTSHRAEGVDYALES 254 (290)
Q Consensus 235 ~~i~v~~~~~~~~ad~v~~s 254 (290)
...+.++-+....|+..+-|
T Consensus 225 aIsFNGN~Yal~eA~VaiiS 244 (308)
T d1y8aa1 225 AIAFNGNEYALKHADVVIIS 244 (308)
T ss_dssp EEEESCCHHHHTTCSEEEEC
T ss_pred eEEecCccccccccceEEec
Confidence 44444555555556655444
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.43 E-value=0.00029 Score=55.00 Aligned_cols=137 Identities=13% Similarity=0.142 Sum_probs=79.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc----eeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF----ERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
+|.|++.+.++.|+ ++++++|+....-+..+.+.+|+...- +......++... ......+.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~------------~~~~~~~~ 87 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL------------PLAEQREA 87 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHS------------CHHHHHHH
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchh------------hHHHHhhh
Confidence 56778877777664 899999999999999999999985321 111221111100 00000000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcce
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDY 250 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~ 250 (290)
..-. .++..-.|+-=..+.+.++-....+.++||+.||..+.+.|.+. +.++.+.. ..-+|+
T Consensus 88 ~~~~---------------~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvG-Ia~~~gt~~a~~aAdi 151 (168)
T d1wpga2 88 CRRA---------------CCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG-IAMGSGTAVAKTASEM 151 (168)
T ss_dssp HHHC---------------CEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEE-EEETTSCHHHHHTCSE
T ss_pred hhhh---------------hhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEE-EEeccccHHHHHhCCE
Confidence 0000 01122223333333443333346699999999999999999975 45555443 345788
Q ss_pred eecC--HhHHHHHhHH
Q 036723 251 ALES--IHNIKEALPE 264 (290)
Q Consensus 251 v~~s--l~el~~~l~~ 264 (290)
++.+ +..+.+++.+
T Consensus 152 vl~~~~l~~v~~~I~~ 167 (168)
T d1wpga2 152 VLADDNFSTIVAAVEE 167 (168)
T ss_dssp EETTCCTHHHHHHHHH
T ss_pred EEccCCHHHHHHHHHc
Confidence 7655 7777776653
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=1.3e-05 Score=63.88 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=66.0
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
+...||+.++|+.+. +.++|.|.+...++..+++.++....|......+......+
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~---------------------- 111 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRG---------------------- 111 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEETT----------------------
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecCC----------------------
Confidence 567899999999996 88999999999999999999987777766665443221100
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
.+..-++.+|.+.+.+++|+|+..-...-...|+.
T Consensus 112 ------------------------~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~ 146 (181)
T d1ta0a_ 112 ------------------------NYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp ------------------------EEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCC
T ss_pred ------------------------cccccHhhcCCCHHHeEEEcCChhhhhcCccCeeE
Confidence 01112456788889999999998655544445554
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.48 E-value=0.0039 Score=45.76 Aligned_cols=45 Identities=16% Similarity=0.162 Sum_probs=33.0
Q ss_pred CCCChhHHHHHHcC---CCcEEEEeCCc---------------hHHHHHHHHhcCCCCcceeEEe
Q 036723 99 LKPDPVLRNLLLSL---PIRKVIFTNAD---------------KTHAARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 99 ~~~~pg~~~~L~~L---~~~~~ivT~~~---------------~~~~~~~l~~~gl~~~f~~i~~ 145 (290)
..|.+++.+.|..| ++++++.|+.. +......|+..|+. ||.++.
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~ 85 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILV 85 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEE
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEE
Confidence 36778888888888 48899999863 23456678888884 677765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=88.68 E-value=0.078 Score=40.86 Aligned_cols=16 Identities=13% Similarity=0.196 Sum_probs=14.4
Q ss_pred CccEEEEecCCCcccC
Q 036723 14 KYDCLLFDLDDTIYPL 29 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~ 29 (290)
++|+++||+||||+|+
T Consensus 4 ~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDG 19 (177)
T ss_dssp GCCEEEEECTTTTSCS
T ss_pred cCeEEEEccCCcccCC
Confidence 5899999999999983
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=81.93 E-value=0.22 Score=35.72 Aligned_cols=38 Identities=18% Similarity=0.167 Sum_probs=25.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHH---HHHHhcCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAA---RVLSRLGLE 137 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~---~~l~~~gl~ 137 (290)
.|.|++.+.|+.|+ ..++++|+....... ..+...|+.
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 46778888888884 778888887655443 345555554
|
| >d2nn4a1 a.272.1.1 (A:1-62) Hypothetical protein YqgQ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: YqgQ-like superfamily: YqgQ-like family: YqgQ-like domain: Hypothetical protein YqgQ species: Bacillus subtilis [TaxId: 1423]
Probab=80.98 E-value=0.14 Score=31.99 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=22.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 202 FEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 202 ~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
++++++++|+ +|++||..+||++..
T Consensus 7 VqQLLK~fG~----~IY~GdR~~DielM~ 31 (62)
T d2nn4a1 7 VQQLLKTFGH----IVYFGDRELEIEFML 31 (62)
T ss_dssp HHHHHHTTTC----CCCCSCHHHHHHHHH
T ss_pred HHHHHHHCCE----eEEeCchHHHHHHHH
Confidence 5789999999 899999999999864
|