Citrus Sinensis ID: 036757

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-----
Protein Sequence
MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHccccccccccccccccHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHcccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEcHccEEcccccccccccccccHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHcccccccEEcEcccccccccccccccccccccEEcccHHHHHHHcccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
madaapnqgdnsfaeknetpknvfdlgafvgdltfeedasgddisLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFvediiipprmvdiivdgenwnpfyPIILICGGAFIQVNEEYMRSLEILSKKLkfigvdpmvktsKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLdiatssdliGVEARstglfsrgreplknrSAVFALGDRINilkeidqpaliphiaeasslkypYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Flexible Loop (DISEMBL)
madaapnqgdnsfaeknetpknVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANIlskgttlreytkgvennlrqVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESklakfvediiippRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARstglfsrgreplknrsAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Low Complexity Region (SEG)
MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Disordered region (IsUnstruct)
**********************VFDLGAFVGDLTFEE***********L*QELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEK*MDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQ*ELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFV*
Disordered Region (DISOPRED)
************************************************LEQELEECKNHDVVANILSKGTTLRE********************IKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDI*******************AESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGV*****************EKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIG**********************FALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Disordered Region (DISEMBL)
**********NSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Disordered Region (DISPRO)
********************KNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	385	2.2.26 [Sep-21-2011]
Q8C754	723	Vacuolar protein sorting-	yes	no	0.833	0.443	0.32	2e-50
Q8N1B4	723	Vacuolar protein sorting-	yes	no	0.833	0.443	0.317	4e-50
Q5TJF0	723	Vacuolar protein sorting-	yes	no	0.833	0.443	0.32	5e-50
O55166	723	Vacuolar protein sorting-	yes	no	0.833	0.443	0.317	1e-49
G5EFV8	702	Vacuolar protein sorting-	yes	no	0.836	0.458	0.280	5e-28
Q9UST3	508	Vacuolar protein sorting-	yes	no	0.701	0.531	0.258	8e-09
P39904	641	Vacuolar protein sorting-	yes	no	0.675	0.405	0.219	3e-07

>sp|Q8C754|VPS52_MOUSE Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus GN=Vps52 PE=2 SV=1

 Score =  199 bits (507), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 202/375 (53%), Gaps = 54/375 (14%)

Query: 36  EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
           E D + D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct: 44  ELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query: 96  KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
           +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SISS+I+ LQE+S  M ++L+NR+ 
Sbjct: 104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQA 163

Query: 156 AESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKL 215
              KL + V+ +++P  +V  I++     P                  ++  L+ L  K 
Sbjct: 164 VRGKLGELVDGLVVPSALVTAILEAPVTEP-----------------RFLEQLQELDAKA 206

Query: 216 KFIGVDPMVKTSKALKDVQPELEKLRQKAVSKV--------------------------- 248
             +     + T+ A  DV+  L++LR KAV+K+                           
Sbjct: 207 AAVREQEAMGTA-ACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQAALLK 265

Query: 249 ---YYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL-DIATSSDLIGVE 304
              +Y FL G+ +    E+R  Y++T++K+  +++R+Y+  L K+Q  ++A   DL+GVE
Sbjct: 266 YRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYVGRLMKVQYEEVAEKDDLMGVE 325

Query: 305 -ARSTGLFSRGREPLKNRSAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFR 361
                G FS  +  L++R+ +F LG R  ++   E++ P L+PH A+    +YP+E LFR
Sbjct: 326 DTAKKGFFS--KPSLRSRNTIFTLGTRGTVISPAELEAPILVPHTAQRGEQRYPFEALFR 383

Query: 362 SLHKLLMDTATSEYL 376
           S H  L+D +  EYL
Sbjct: 384 SQHYALLDNSCREYL 398

May be involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.
Mus musculus (taxid: 10090)

>sp|Q8N1B4|VPS52_HUMAN Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens GN=VPS52 PE=1 SV=1

 Score =  199 bits (505), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 203/375 (54%), Gaps = 54/375 (14%)

Query: 36  EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
           E D + D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct: 44  ELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query: 96  KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
           +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SISS+I+ LQE+S  M ++L+NR+ 
Sbjct: 104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQA 163

Query: 156 AESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKL 215
              KL + V+ +++P  +V  I++     P                  ++  L+ L  K 
Sbjct: 164 VRGKLGELVDGLVVPSALVTAILEAPVTEP-----------------RFLEQLQELDAKA 206

Query: 216 KFIGVDPMVKTSKALKDVQPELEKLRQKAVSKV--------------------------- 248
             +  +   + + A  DV+  L++LR KAV+K+                           
Sbjct: 207 AAVR-EQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLK 265

Query: 249 ---YYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL-DIATSSDLIGVE 304
              +Y FL G+ +    E+R  Y++T++K+  +++R+Y+  L K+Q  ++A   DL+GVE
Sbjct: 266 YRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVE 325

Query: 305 -ARSTGLFSRGREPLKNRSAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFR 361
                G FS  +  L++R+ +F LG R +++   E++ P L+PH A+    +YP+E LFR
Sbjct: 326 DTAKKGFFS--KPSLRSRNTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFR 383

Query: 362 SLHKLLMDTATSEYL 376
           S H  L+D +  EYL
Sbjct: 384 SQHYALLDNSCREYL 398

May be involved in retrograde transport of early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.

Homo sapiens (taxid: 9606)

>sp|Q5TJF0|VPS52_CANFA Vacuolar protein sorting-associated protein 52 homolog OS=Canis familiaris GN=VPS52 PE=3 SV=1

 Score =  198 bits (504), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 203/375 (54%), Gaps = 54/375 (14%)

Query: 36  EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
           E D S D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct: 44  ELDISSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query: 96  KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
           +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SISS+I+ LQE+S  M ++L+NR+ 
Sbjct: 104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQA 163

Query: 156 AESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKL 215
              KL + V+ +I+P  ++  I++     P                  ++  L+ L  K 
Sbjct: 164 VRGKLGELVDGLIVPSALIMAILEAPVTEP-----------------RFLEQLQELDAKA 206

Query: 216 KFIGVDPMVKTSKALKDVQPELEKLRQKAVSKV--------------------------- 248
             +  +   + + A  DV+  L++LR KAV+K+                           
Sbjct: 207 AAVR-EQEARGTAACADVRGILDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLK 265

Query: 249 ---YYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL-DIATSSDLIGVE 304
              +Y FL G+ +    E+R  Y++T++K+  +++R+Y+  L K+Q  ++A   DL+GVE
Sbjct: 266 YRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVE 325

Query: 305 -ARSTGLFSRGREPLKNRSAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFR 361
                G FS  +  L++R+ +F LG R +++   E++ P L+PH A+    +YP+E LFR
Sbjct: 326 DTAKKGFFS--KPSLRSRNTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFR 383

Query: 362 SLHKLLMDTATSEYL 376
           S H  L+D +  EYL
Sbjct: 384 SQHYALLDNSCREYL 398

May be involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.

Canis familiaris (taxid: 9615)

>sp|O55166|VPS52_RAT Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus GN=Vps52 PE=2 SV=2

 Score =  197 bits (501), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 201/375 (53%), Gaps = 54/375 (14%)

Query: 36  EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
           E D + D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct: 44  ELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query: 96  KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
           +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SIS +I+ LQE+S  M ++L+NR+ 
Sbjct: 104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISCEIRTLQEQSGAMNIRLRNRQA 163

Query: 156 AESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKL 215
              KL + V+ +++P  +V  I++     P                  ++  L+ L  K 
Sbjct: 164 VRGKLGELVDGLVVPSALVTAILEAPVTEP-----------------RFLEQLQELDAKA 206

Query: 216 KFIGVDPMVKTSKALKDVQPELEKLRQKAVSKV--------------------------- 248
             +  +   + + A  DV+  L++LR KAV+K+                           
Sbjct: 207 AAVR-EQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLK 265

Query: 249 ---YYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL-DIATSSDLIGVE 304
              +Y FL G+ +    EVR  Y++T++K+  +++R+Y+  L K+Q  ++A   DL+GVE
Sbjct: 266 YRFFYQFLLGNERATAKEVRDEYVETLSKIYLSYYRSYVGRLMKVQYEEVAEKDDLMGVE 325

Query: 305 -ARSTGLFSRGREPLKNRSAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFR 361
                G FS  +  L++R+ +F LG R  ++   E++ P L+PH A+    +YP+E LFR
Sbjct: 326 DTAKKGFFS--KPSLRSRNTIFTLGTRGAVISPAELEAPILVPHTAQRGEQRYPFEALFR 383

Query: 362 SLHKLLMDTATSEYL 376
           S H  L+D +  EYL
Sbjct: 384 SQHYALLDNSCREYL 398

May be involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.

Rattus norvegicus (taxid: 10116)

>sp|G5EFV8|VPS52_CAEEL Vacuolar protein sorting-associated protein 52 homolog OS=Caenorhabditis elegans GN=vps-52 PE=1 SV=2

 Score =  125 bits (315), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 175/381 (45%), Gaps = 59/381 (15%)

Query: 36  EEDASGDDISLEGLEQELEECKNHD--VVANILSKGTTLREYTKGVENNLRQVELDSIQD 93
           + +A+    ++  LE  L + +  D  +V   ++ G  L E    V   L +    S+Q 
Sbjct: 10  KSEANDRSFTISSLEFCLSQLRKADPNLVKKAIASGDGLTESKNDVSTRLSEAHRYSVQQ 69

Query: 94  YIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNR 153
            +  S+ L  LH+Q+  CD +  +++  L  FQ  +GSI  D+K LQ +S  +  +L+NR
Sbjct: 70  CLDNSEQLAQLHNQLVHCDNVFERLQATLYSFQDNLGSIGQDMKNLQLQSHHIHQELENR 129

Query: 154 KVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEE-YMRSLEILS 212
           +    +L++FV+DI +   M+  I D +                   N+  ++ +L  L 
Sbjct: 130 QKVRVELSQFVDDIAVSQTMMKTINDTD------------------ANDRGFLEALHELH 171

Query: 213 KKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKV------------------------ 248
            K+  I +      + A+ D  P LE L+ KAV KV                        
Sbjct: 172 HKITLI-LQRGNGDAVAVNDTMPILEGLKLKAVVKVREWLLQKMFQFRKPLSNYQVFQHQ 230

Query: 249 ------YYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL-DIATSSDLI 301
                 +Y FL  H      E++  YIDT++K+   +F+AY   L KL + D+AT  D +
Sbjct: 231 LLKCRFFYEFLLHHDLISAKELQDEYIDTISKMFFTYFKAYATRLFKLAMKDVATKEDAL 290

Query: 302 GV--EARSTGL---FSRGREPLKNRSAVFALGDRINILKEIDQPALI-PHIAEASSLKYP 355
           G    A+  GL   FS  +  ++N++ VF++G R  IL +    ALI PH A  +   Y 
Sbjct: 291 GSIDFAKPAGLGAIFSSKQHVVRNKATVFSIGQRHQILSDDFLGALIVPHAATQNHQSYQ 350

Query: 356 YEVLFRSLHKLLMDTATSEYL 376
           +E LFRS+    +D  + EYL
Sbjct: 351 FEALFRSIQLAFVDHYSHEYL 371

Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9UST3|VPS52_SCHPO Vacuolar protein sorting-associated protein 52 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps52 PE=3 SV=1

 Score = 62.0 bits (149), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 32/302 (10%)

Query: 106 DQIRDCDAILSQMETLLSG---FQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAK 162
           D +   D++ S +  +LS    FQ ++   +SDI  + E+S  + + L N K  ES L  
Sbjct: 15  DDLNKLDSLKSVLNDVLSSLERFQVDLDVATSDIYKVSERSNKIQVNLNNLKAVESALGA 74

Query: 163 FVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEE------YMRSLEI------ 210
            ++  I+PP ++  I  G+  +P +   L    +F++  E+         SL+I      
Sbjct: 75  EIDGAILPPDLIKTISTGDMDHPSWNSALEKLTSFLEGGEDDSSLGNMFNSLQINKDQKK 134

Query: 211 LSKKLKFIGVDP----MVKTSKALKDVQPELEKLRQKAV--SKVYYFFLKGHGKEIYNEV 264
           L  KL+   ++     +V T K  +    ++  +R+  +  +K YY FL    +++  E+
Sbjct: 135 LVDKLRDKAIERIRNYIVVTIKMFRQAFVDVFPIRKHRLIANKNYYLFLFKFNRKLALEL 194

Query: 265 RAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLF--SRG-REPLKNR 321
           + AYI+TMN     HF  Y + L+K+ +      + I VE    GLF  S+G ++   N+
Sbjct: 195 QRAYINTMNWFYLYHFEQYSRFLDKVHV---LKGETIRVEEDRKGLFNLSKGAQQSYGNQ 251

Query: 322 SAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLF 381
                L  +   +  +   + + HI   SS +Y  E ++ S   +L +  +SEY  A L 
Sbjct: 252 MLSVNLRPQDFDMNSVLTASTMHHI--ESSPQY-IERVYCSWELVLTEHVSSEY--AFLL 306

Query: 382 EF 383
           E+
Sbjct: 307 EY 308

Involved in retrograde transport from early and late endosomes to late Golgi by linking the vesicle through the t-SNARE TGL1 to the Golgi, leading to the membrane fusion between late Golgi and endosomal vesicles.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P39904|VPS52_YEAST Vacuolar protein sorting-associated protein 52 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS52 PE=1 SV=2

 Score = 56.6 bits (135), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 126/314 (40%), Gaps = 54/314 (17%)

Query: 114 ILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRM 173
           I+ Q+   L+ F   + + + D+  +++KS ++   L+      + ++  V D++IPP +
Sbjct: 73  IIPQLIDYLTEFTNRLSNYTQDLDFIKKKSNELQSLLEYNSTKLAHISPMVNDLMIPPEL 132

Query: 174 VDIIVDG---ENWNPFYPIILICGGAFI----------QVNEEYMRS------------- 207
           +D I+ G   E+W     I  I     I          Q N++   S             
Sbjct: 133 IDDIIKGKINESWQD--NITFIADKEEIYNKYRSNNLDQDNKDAENSAMLAPKDFDKLCQ 190

Query: 208 -LEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVY--YFFLKGHGKEIYNEV 264
            L+IL   +       ++   K L+   P   +  Q  + KV   + F++ +   +  E+
Sbjct: 191 LLDILKNVILERSKRLIISKIKTLRSHNPVPSQRIQNKLLKVQKIFPFIRDNNLSLALEL 250

Query: 265 RAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREP------- 317
           R AY  TM      +F  YI++L  LQ     S   +G    +T +      P       
Sbjct: 251 RQAYCYTMKWYYREYFSRYIRSLTILQFQQIDSQFALGNGLSTTSVSGFNNSPSLFFSNY 310

Query: 318 --------LKNRSAV--------FALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFR 361
                     N+  V        F +  R+NIL + D   ++  IAE ++ K   E+ F+
Sbjct: 311 LTTSASNAFYNKLPVTDEKIDKYFQIKKRLNILTQEDNTVMVSQIAENNTTKNYIEIGFK 370

Query: 362 SLHKLLMDTATSEY 375
           +L+  ++D  T EY
Sbjct: 371 NLNLAILDNCTVEY 384

Involved in retrograde transport from early and late endosomes to late Golgi by linking the vesicle through the t-SNARE TGL1 to the Golgi, leading to the membrane fusion between late Golgi and endosomal vesicles. May also be involved in the actin cytoskeleton organization.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	385
225423672	707	PREDICTED: vacuolar protein sorting-asso	0.929	0.506	0.778	1e-173
449441768	698	PREDICTED: vacuolar protein sorting-asso	0.903	0.498	0.748	1e-164
255557102	713	Vacuolar protein sorting protein, putati	0.911	0.492	0.780	1e-163
357441295	699	Vacuolar protein sorting-associated prot	0.903	0.497	0.744	1e-160
356506007	707	PREDICTED: vacuolar protein sorting-asso	0.927	0.504	0.766	1e-160
356573151	707	PREDICTED: vacuolar protein sorting-asso	0.927	0.504	0.758	1e-160
297838955	707	hypothetical protein ARALYDRAFT_476259 [	0.929	0.506	0.710	1e-157
18409811	707	Vps52 / Sac2-like protein [Arabidopsis t	0.929	0.506	0.710	1e-157
51243241	707	TPA_exp: ARE1-like protein [Arabidopsis	0.929	0.506	0.707	1e-156
224086701	718	predicted protein [Populus trichocarpa]	0.927	0.497	0.758	1e-152

>gi|225423672|ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog [Vitis vinifera] gi|297737982|emb|CBI27183.3| unnamed protein product [Vitis vinifera]

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 317/407 (77%), Positives = 336/407 (82%), Gaps = 49/407 (12%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           MAD A NQ  NS+ E N++ +  FDLG FVGDL FEED S DDISLEGL++ELEEC+N D
Sbjct: 1   MADTATNQVGNSYGEANDSQEIAFDLGVFVGDLNFEEDVSSDDISLEGLQKELEECRNDD 60

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VVANILSKGT LREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCD+ILSQMET
Sbjct: 61  VVANILSKGTKLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDSILSQMET 120

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDII+PPRMVDIIVDG
Sbjct: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMVDIIVDG 180

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VNEEYMR+LEILSKKLKF+ V+PMVKTSKALKDVQPELEKL
Sbjct: 181 E------------------VNEEYMRTLEILSKKLKFVEVEPMVKTSKALKDVQPELEKL 222

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKAVSKV+ F                               FLK HGKE+Y EVRAAYI
Sbjct: 223 RQKAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEVYIEVRAAYI 282

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGD 329
           DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGV+ RST LFSRGREPLKNRSAV+ALG+
Sbjct: 283 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVDTRSTSLFSRGREPLKNRSAVYALGE 342

Query: 330 RINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYL 376
           RI+ILKEIDQPALIPHIAEASS KYPYEVLFRSLHKLLMDTA+SEYL
Sbjct: 343 RISILKEIDQPALIPHIAEASSTKYPYEVLFRSLHKLLMDTASSEYL 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441768|ref|XP_004138654.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog [Cucumis sativus] gi|449490141|ref|XP_004158519.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog [Cucumis sativus]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 304/406 (74%), Positives = 325/406 (80%), Gaps = 58/406 (14%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           MAD A +Q          TPKNVFDL +FVGDLT EEDA  DDISLEGL+QELEECK+ D
Sbjct: 1   MADTAIDQV---------TPKNVFDLESFVGDLTVEEDACSDDISLEGLQQELEECKDDD 51

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VV NILSKG  LREYTKGVENNLRQVELDSIQ+YIKESDNLVSLH+QIRDCD ILSQMET
Sbjct: 52  VVTNILSKGVKLREYTKGVENNLRQVELDSIQEYIKESDNLVSLHEQIRDCDNILSQMET 111

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQAEIGSIS+DIK+LQEKSMDMGLKLKNRKVAESKLAKFVE+II+PPRM+DIIVDG
Sbjct: 112 LLSGFQAEIGSISADIKVLQEKSMDMGLKLKNRKVAESKLAKFVEEIIVPPRMIDIIVDG 171

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VN+EY+R+LEILSKKL    VDPM+K SKALKDVQPELEKL
Sbjct: 172 E------------------VNDEYLRTLEILSKKLVVAEVDPMIKNSKALKDVQPELEKL 213

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKAVSKVY F                               FLK H KE+YNEVR AYI
Sbjct: 214 RQKAVSKVYDFLVQKLQALRKPKTNIQILQQSVLLKYKYVISFLKDHSKEVYNEVRTAYI 273

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGD 329
           DTMNKVLSAHFRAYIQALEKLQLDIATS+DLIGVEARS+GLF RGREPLKNRSAVFALGD
Sbjct: 274 DTMNKVLSAHFRAYIQALEKLQLDIATSNDLIGVEARSSGLFLRGREPLKNRSAVFALGD 333

Query: 330 RINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 375
           RI ILKE+D+PALIPHIAEASS+KYPYEVLFRSLHKLLMDTATSEY
Sbjct: 334 RIKILKEVDEPALIPHIAEASSIKYPYEVLFRSLHKLLMDTATSEY 379

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557102|ref|XP_002519583.1| Vacuolar protein sorting protein, putative [Ricinus communis] gi|223541241|gb|EEF42794.1| Vacuolar protein sorting protein, putative [Ricinus communis]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 313/401 (78%), Positives = 333/401 (83%), Gaps = 50/401 (12%)

Query: 8   QGDNSFAE-KNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANIL 66
           Q D S+   +++ P+NVFDLGAFVGDLT EEDA+ DDISLEGLEQELEECKN DVVANIL
Sbjct: 13  QQDQSYGGIEDDAPRNVFDLGAFVGDLTVEEDAASDDISLEGLEQELEECKNDDVVANIL 72

Query: 67  SKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQ 126
           SKGTTLR+YTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCD+ILSQMETLLSGFQ
Sbjct: 73  SKGTTLRDYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDSILSQMETLLSGFQ 132

Query: 127 AEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPF 186
           AEIGSISSDIKILQEKSMDMGLKLKNRKVAES+LAKFVEDII+PPRMVD+IVDGE     
Sbjct: 133 AEIGSISSDIKILQEKSMDMGLKLKNRKVAESQLAKFVEDIIVPPRMVDVIVDGE----- 187

Query: 187 YPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVS 246
                        VN+EY+R+LEILSKKLKF+ VDP+VK +KALKDVQPELEKLRQKAVS
Sbjct: 188 -------------VNDEYLRTLEILSKKLKFVEVDPLVKGAKALKDVQPELEKLRQKAVS 234

Query: 247 KVYYF-------------------------------FLKGHGKEIYNEVRAAYIDTMNKV 275
           KV+ F                               FLK HGKEIY EVR AYIDTMNKV
Sbjct: 235 KVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVISFLKEHGKEIYIEVRTAYIDTMNKV 294

Query: 276 LSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILK 335
           LSAHFRAYIQALEKLQLDIA SSDLIGVE RS+GLFSR REPLKNRSAVFALG+RINILK
Sbjct: 295 LSAHFRAYIQALEKLQLDIAISSDLIGVETRSSGLFSRVREPLKNRSAVFALGERINILK 354

Query: 336 EIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYL 376
           EIDQPALIPHIAEASS KYPYEVLFRSLHKLLMDTATSEYL
Sbjct: 355 EIDQPALIPHIAEASSQKYPYEVLFRSLHKLLMDTATSEYL 395

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441295|ref|XP_003590925.1| Vacuolar protein sorting-associated protein-like protein [Medicago truncatula] gi|355479973|gb|AES61176.1| Vacuolar protein sorting-associated protein-like protein [Medicago truncatula]

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/407 (74%), Positives = 323/407 (79%), Gaps = 59/407 (14%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           MAD A N           +P + FDLGAFVGDLT EED +GDDISL+GL+QELEECKN +
Sbjct: 1   MADVASN---------TMSPSSQFDLGAFVGDLTIEEDLNGDDISLDGLQQELEECKNDE 51

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VVANILSKG  LR+YTKGVEN+LR+VELDSIQDYIKESDNLVSLHDQI DCD ILS MET
Sbjct: 52  VVANILSKGPKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDNILSHMET 111

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQAEIGSISSDIKILQEKSMDMGL+LKNRKVAESKLAKFVEDIIIPPRMVDI+VDG
Sbjct: 112 LLSGFQAEIGSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIIPPRMVDILVDG 171

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VNEEYMR+LEILSKKLKF+ VD MVK SKALKDVQPELEKL
Sbjct: 172 E------------------VNEEYMRTLEILSKKLKFVEVDTMVKASKALKDVQPELEKL 213

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKAVSKV+ F                               FLK HGKE+YNEVRAAYI
Sbjct: 214 RQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVNFLKEHGKEVYNEVRAAYI 273

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARS-TGLFSRGREPLKNRSAVFALG 328
           DTMNKVLSAHFRAYIQALEKLQLDIATS DLIGVE RS +GLF+   +PLKNRSAVFALG
Sbjct: 274 DTMNKVLSAHFRAYIQALEKLQLDIATSYDLIGVETRSNSGLFATAWQPLKNRSAVFALG 333

Query: 329 DRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 375
           DRINILKEID+PALIPHIAEASS+KYPYEVLFRSL KLLMDTATSEY
Sbjct: 334 DRINILKEIDEPALIPHIAEASSMKYPYEVLFRSLQKLLMDTATSEY 380

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506007|ref|XP_003521780.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog [Glycine max]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 311/406 (76%), Positives = 329/406 (81%), Gaps = 49/406 (12%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           MAD A      S  E N+  KNVFDLGAFVGDLT E+D S DDISLEGLEQELEECKN+D
Sbjct: 1   MADVAGATVSPSIGETNDAQKNVFDLGAFVGDLTLEDDPSSDDISLEGLEQELEECKNND 60

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VVANILSKGT LR+YTKGVEN+LR+VELDSIQDYIKESDNLVSLHDQI DCD+ILSQMET
Sbjct: 61  VVANILSKGTKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDSILSQMET 120

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQAEIGSISSDIKILQEKSMDM L+LKNRKVAESKLAKFVEDIIIPPRMVD++VDG
Sbjct: 121 LLSGFQAEIGSISSDIKILQEKSMDMSLRLKNRKVAESKLAKFVEDIIIPPRMVDVLVDG 180

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VNEEYMR+LEILSKKLKF+ VDPMVK SKALKDVQPELEKL
Sbjct: 181 E------------------VNEEYMRTLEILSKKLKFVEVDPMVKASKALKDVQPELEKL 222

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKAVSKV+ F                               FLK HGKEIYNEVRAAYI
Sbjct: 223 RQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEIYNEVRAAYI 282

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGD 329
           DTMNKVLSAHFRAYIQALEKLQLDIAT +DLIGVE RS+GLF R REPLKNRSAVFALGD
Sbjct: 283 DTMNKVLSAHFRAYIQALEKLQLDIATYNDLIGVETRSSGLFIRAREPLKNRSAVFALGD 342

Query: 330 RINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 375
           RI+ILK+ID+PALIPHIAEASS KYPYEVLFRSL KLLMDTATSEY
Sbjct: 343 RISILKDIDEPALIPHIAEASSNKYPYEVLFRSLQKLLMDTATSEY 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573151|ref|XP_003554727.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog [Glycine max]

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/406 (75%), Positives = 328/406 (80%), Gaps = 49/406 (12%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           MAD A      S  E N+  KNVFDLGAFVGDLT E+D S DDISLEGLEQELEECKN+D
Sbjct: 1   MADVAGATVSPSIGETNDAQKNVFDLGAFVGDLTLEDDPSSDDISLEGLEQELEECKNND 60

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VVANILSKGT LR+YTKGVEN+LR+VELDSIQDYIKESDNLVSLHDQI DCD+ILSQMET
Sbjct: 61  VVANILSKGTKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDSILSQMET 120

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQAEIGSISSDIKILQEKSMDM L+LKNRKVAESKLAKFVEDII+PPRMVD++VDG
Sbjct: 121 LLSGFQAEIGSISSDIKILQEKSMDMSLRLKNRKVAESKLAKFVEDIIVPPRMVDVLVDG 180

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VNEEYMR++E+LSKKLKF+ VDPMVK SKALKDVQPELEKL
Sbjct: 181 E------------------VNEEYMRTIEVLSKKLKFVEVDPMVKASKALKDVQPELEKL 222

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKAVSKV+ F                               FLK HGKEIYNEV AAYI
Sbjct: 223 RQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEIYNEVHAAYI 282

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGD 329
           DTMNKVLSAHFRAYIQALEKLQLDIAT +DLIGVE RS+GLF R REPLKNRSAVFALGD
Sbjct: 283 DTMNKVLSAHFRAYIQALEKLQLDIATYNDLIGVETRSSGLFIRAREPLKNRSAVFALGD 342

Query: 330 RINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 375
           RINILK+ID+PALIPHIAEASS KYPYEVLFRSL KLLMDTATSEY
Sbjct: 343 RINILKDIDEPALIPHIAEASSNKYPYEVLFRSLQKLLMDTATSEY 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297838955|ref|XP_002887359.1| hypothetical protein ARALYDRAFT_476259 [Arabidopsis lyrata subsp. lyrata] gi|297333200|gb|EFH63618.1| hypothetical protein ARALYDRAFT_476259 [Arabidopsis lyrata subsp. lyrata]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/407 (71%), Positives = 324/407 (79%), Gaps = 49/407 (12%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           M+D + +    +  + +   K  FDLGAFVGDL FEED+  +DISLEGL+QELEEC++ +
Sbjct: 1   MSDISIDALGQTMGDFSNHEKLGFDLGAFVGDLAFEEDSGSEDISLEGLQQELEECESDE 60

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VVANILS G  LREY KGVENNLR+VELDSI+DYIKESDNLVSLHDQIRDCD+ILSQMET
Sbjct: 61  VVANILSSGAKLREYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIRDCDSILSQMET 120

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQ EIGSISSDIKILQEKSMDMGL+LKNR+VAESKLAKFVEDII+PP+M+D+IVDG
Sbjct: 121 LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVDG 180

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VNEEYM++LEILSKKLKF+  D  VK+SKALKDV+PELEKL
Sbjct: 181 E------------------VNEEYMKTLEILSKKLKFVVADQAVKSSKALKDVEPELEKL 222

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKA+SKVY F                               FLK HGKE++ +VRAAYI
Sbjct: 223 RQKAISKVYDFIVQKLIALRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYI 282

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGD 329
           DTMNKVLSAHFRAYIQALEKLQLDIAT+ DLIGVE R+TGLFSR REPLKNRSAVFALG+
Sbjct: 283 DTMNKVLSAHFRAYIQALEKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGE 342

Query: 330 RINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYL 376
           RI I+KEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY+
Sbjct: 343 RIKIIKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYI 389

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18409811|ref|NP_565015.1| Vps52 / Sac2-like protein [Arabidopsis thaliana] gi|14194159|gb|AAK56274.1|AF367286_1 At1g71270/F3I17_8 [Arabidopsis thaliana] gi|28416481|gb|AAO42771.1| At1g71270/F3I17_8 [Arabidopsis thaliana] gi|332197061|gb|AEE35182.1| Vps52 / Sac2-like protein [Arabidopsis thaliana]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/407 (71%), Positives = 324/407 (79%), Gaps = 49/407 (12%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           M+D + +    +  + +   K  FDLGAFVGDL FEED+  +DISLEGL+QELEEC++ +
Sbjct: 1   MSDISIDALGQTMGDFSNHEKLGFDLGAFVGDLAFEEDSGSEDISLEGLQQELEECESDE 60

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VVANILS G  LREY KGVENNLR+VELDSI+DYIKESDNLVSLHDQIRDCD+ILSQMET
Sbjct: 61  VVANILSSGDKLREYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIRDCDSILSQMET 120

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQ EIGSISSDIKILQEKSMDMGL+LKNR+VAESKLAKFVEDII+PP+M+D+IVDG
Sbjct: 121 LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVDG 180

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VNEEYM++LEILSKKLKF+  D  VK+SKALKDV+PELEKL
Sbjct: 181 E------------------VNEEYMKTLEILSKKLKFVEADQAVKSSKALKDVEPELEKL 222

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKA+SKVY F                               FLK HGKE++ +VRAAYI
Sbjct: 223 RQKAISKVYDFIVQKLIALRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYI 282

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGD 329
           DTMNKVLSAHFRAYIQALEKLQLDIAT+ DLIGVE R+TGLFSR REPLKNRSAVFALGD
Sbjct: 283 DTMNKVLSAHFRAYIQALEKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGD 342

Query: 330 RINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYL 376
           RI I+K+IDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY+
Sbjct: 343 RIKIIKDIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYM 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51243241|tpg|DAA01355.1| TPA_exp: ARE1-like protein [Arabidopsis thaliana]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 288/407 (70%), Positives = 323/407 (79%), Gaps = 49/407 (12%)

Query: 1   MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
           M+D + +    +  + +   K  FDLGAFVGDL FEED+  +DISLEGL+QELEEC++ +
Sbjct: 1   MSDISIDALGQTMGDFSNHEKLGFDLGAFVGDLAFEEDSGSEDISLEGLQQELEECESDE 60

Query: 61  VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
           VVANILS G  LREY KGVENNLR+VELDSI+DYIKESDNLVSLHDQIRDCD+ILSQMET
Sbjct: 61  VVANILSSGDKLREYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIRDCDSILSQMET 120

Query: 121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
           LLSGFQ EIGSISSDIKILQEKSMDMGL+LKNR+VAESKLAKFVEDII+PP+M+D+IV G
Sbjct: 121 LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVGG 180

Query: 181 ENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKL 240
           E                  VNEEYM++LEILSKKLKF+  D  VK+SKALKDV+PELEKL
Sbjct: 181 E------------------VNEEYMKTLEILSKKLKFVEADQAVKSSKALKDVEPELEKL 222

Query: 241 RQKAVSKVYYF-------------------------------FLKGHGKEIYNEVRAAYI 269
           RQKA+SKVY F                               FLK HGKE++ +VRAAYI
Sbjct: 223 RQKAISKVYDFIVQKLIALRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYI 282

Query: 270 DTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGD 329
           DTMNKVLSAHFRAYIQALEKLQLDIAT+ DLIGVE R+TGLFSR REPLKNRSAVFALGD
Sbjct: 283 DTMNKVLSAHFRAYIQALEKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGD 342

Query: 330 RINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYL 376
           RI I+K+IDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY+
Sbjct: 343 RIKIIKDIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYM 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086701|ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|222853914|gb|EEE91461.1| predicted protein [Populus trichocarpa]

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/393 (75%), Positives = 320/393 (81%), Gaps = 36/393 (9%)

Query: 17  NETPKNVFDLGAFVGDL-TFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREY 75
           NE  K+VFDLGAFVGDL + E+DA+ DDISLEGLEQELEEC+N DVV NILSKGT LR++
Sbjct: 11  NEITKSVFDLGAFVGDLGSIEDDAASDDISLEGLEQELEECRNDDVVTNILSKGTKLRDH 70

Query: 76  TKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSD 135
           TKGVENNLRQVELDSIQDYIKESDNLVSLH+QIRDCD ILSQMETLLSGFQ EIGSISSD
Sbjct: 71  TKGVENNLRQVELDSIQDYIKESDNLVSLHEQIRDCDIILSQMETLLSGFQGEIGSISSD 130

Query: 136 IKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGG 195
           IKILQEKSMDMGLKLKNRK AESKLAKFVEDII+PPRMVDIIVDGE    + P  L    
Sbjct: 131 IKILQEKSMDMGLKLKNRKAAESKLAKFVEDIIVPPRMVDIIVDGEVLLIYVPSHLFFEK 190

Query: 196 AFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYF---- 251
               VNEEY R+LEILSKKLKF+  D ++K SKALKDVQPELEKLRQKAV+KV+ F    
Sbjct: 191 G---VNEEYFRTLEILSKKLKFVEADQLIKGSKALKDVQPELEKLRQKAVTKVFDFIVQK 247

Query: 252 ---------------------------FLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYI 284
                                      FLK H KE+Y EVRAAY+DTMNKVLSAHFRAYI
Sbjct: 248 LYALRKPKTNIQILQQSVLLKNKYVISFLKEHAKEVYIEVRAAYVDTMNKVLSAHFRAYI 307

Query: 285 QALEKLQLDIATSSDLIGVEA-RSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALI 343
           QALEKLQLDIATSSDLIGVE  RSTGLFS  R PLKN+SAVFALG+RINILK++DQPALI
Sbjct: 308 QALEKLQLDIATSSDLIGVETTRSTGLFSTARGPLKNKSAVFALGERINILKDMDQPALI 367

Query: 344 PHIAEASSLKYPYEVLFRSLHKLLMDTATSEYL 376
           PHIAEA S KYPYEVLFRSLHKLLMDTATSEYL
Sbjct: 368 PHIAEAGSQKYPYEVLFRSLHKLLMDTATSEYL 400

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	385
TAIR|locus:2032343	707	POK "AT1G71270" [Arabidopsis t	0.976	0.531	0.670	8.7e-127
UNIPROTKB|Q5TJF0	723	VPS52 "Vacuolar protein sortin	0.898	0.478	0.334	2.6e-48
UNIPROTKB|Q8N1B4	723	VPS52 "Vacuolar protein sortin	0.898	0.478	0.331	3.4e-48
MGI|MGI:1330304	723	Vps52 "vacuolar protein sortin	0.901	0.479	0.331	5.9e-48
RGD|3618	723	Vps52 "vacuolar protein sortin	0.898	0.478	0.331	1.8e-47
DICTYBASE|DDB_G0271856	798	vps52C "Vps52 / Sac2 family pr	0.737	0.355	0.318	3.4e-31
DICTYBASE|DDB_G0293496	876	vps52B "Vps52 / Sac2 family pr	0.854	0.375	0.282	3e-29
ASPGD|ASPL0000013581	670	vps52 [Emericella nidulans (ta	0.823	0.473	0.273	5.4e-25
UNIPROTKB|G4N4U8	659	MGG_06020 "Vps52/Sac2 family p	0.859	0.502	0.286	4.9e-24
WB|WBGene00007059	702	vps-52 [Caenorhabditis elegans	0.706	0.387	0.274	8e-18

TAIR|locus:2032343 POK "AT1G71270" [Arabidopsis thaliana (taxid:3702)]

 Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
 Identities = 261/389 (67%), Positives = 311/389 (79%)

Query:     1 MADAAPNQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHD 60
             M+D + +    +  + +   K  FDLGAFVGDL FEED+  +DISLEGL+QELEEC++ +
Sbjct:     1 MSDISIDALGQTMGDFSNHEKLGFDLGAFVGDLAFEEDSGSEDISLEGLQQELEECESDE 60

Query:    61 VVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET 120
             VVANILS G  LREY KGVENNLR+VELDSI+DYIKESDNLVSLHDQIRDCD+ILSQMET
Sbjct:    61 VVANILSSGDKLREYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIRDCDSILSQMET 120

Query:   121 LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDG 180
             LLSGFQ EIGSISSDIKILQEKSMDMGL+LKNR+VAESKLAKFVEDII+PP+M+D+IVDG
Sbjct:   121 LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVDG 180

Query:   181 ENWNPFYPIILICGGA--FIQVNE-----EYMRSLEILSKKLKFIGV----DPMVKTSKA 229
             E    +   + I      F++ ++     + ++ +E   +KL+   +    D +V+   A
Sbjct:   181 EVNEEYMKTLEILSKKLKFVEADQAVKSSKALKDVEPELEKLRQKAISKVYDFIVQKLIA 240

Query:   230 LKDVQPELEKLRQKAVSKVYYF--FLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQAL 287
             L+  +  ++ L+Q  + K  Y   FLK HGKE++ +VRAAYIDTMNKVLSAHFRAYIQAL
Sbjct:   241 LRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYIDTMNKVLSAHFRAYIQAL 300

Query:   288 EKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIA 347
             EKLQLDIAT+ DLIGVE R+TGLFSR REPLKNRSAVFALGDRI I+K+IDQPALIPHIA
Sbjct:   301 EKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGDRIKIIKDIDQPALIPHIA 360

Query:   348 EASSLKYPYEVLFRSLHKLLMDTATSEYL 376
             EASSLKYPYEVLFRSLHKLLMDTATSEY+
Sbjct:   361 EASSLKYPYEVLFRSLHKLLMDTATSEYM 389

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0009860 "pollen tube growth" evidence=IMP

GO:0000139 "Golgi membrane" evidence=IDA

GO:0012505 "endomembrane system" evidence=IDA

GO:0019953 "sexual reproduction" evidence=IMP

UNIPROTKB|Q5TJF0 VPS52 "Vacuolar protein sorting-associated protein 52 homolog" [Canis lupus familiaris (taxid:9615)]

 Score = 505 (182.8 bits), Expect = 2.6e-48, P = 2.6e-48
 Identities = 122/365 (33%), Positives = 205/365 (56%)

Query:    36 EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
             E D S D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct:    44 ELDISSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query:    96 KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
             +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SISS+I+ LQE+S  M ++L+NR+ 
Sbjct:   104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQA 163

Query:   156 AESKLAKFVEDIIIPPRMVDIIVDGENWNP-FYPIILICGGAFIQVNEEYMRSLEILSKK 214
                KL + V+ +I+P  ++  I++     P F   +         V E+  R     +  
Sbjct:   164 VRGKLGELVDGLIVPSALIMAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADV 223

Query:   215 ---LKFIGVDPMVKTSK-ALKDV----QPELE-KLRQKAVSKVYYF--FLKGHGKEIYNE 263
                L  + V  + K  +  L+ +    +P    ++ Q A+ K  +F  FL G+ +    E
Sbjct:   224 RGILDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKE 283

Query:   264 VRAAYIDTMNKVLSAHFRAYIQALEKLQLD-IATSSDLIGVE-ARSTGLFSRGREPLKNR 321
             +R  Y++T++K+  +++R+Y+  L K+Q + +A   DL+GVE     G FS+    L++R
Sbjct:   284 IRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSK--PSLRSR 341

Query:   322 SAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVAL 379
             + +F LG R +++   E++ P L+PH A+    +YP+E LFRS H  L+D +  EYL   
Sbjct:   342 NTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFIC 401

Query:   380 LFEFV 384
              F FV
Sbjct:   402 EF-FV 405

GO:0010008 "endosome membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

UNIPROTKB|Q8N1B4 VPS52 "Vacuolar protein sorting-associated protein 52 homolog" [Homo sapiens (taxid:9606)]

 Score = 504 (182.5 bits), Expect = 3.4e-48, P = 3.4e-48
 Identities = 121/365 (33%), Positives = 205/365 (56%)

Query:    36 EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
             E D + D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct:    44 ELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query:    96 KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
             +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SISS+I+ LQE+S  M ++L+NR+ 
Sbjct:   104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQA 163

Query:   156 AESKLAKFVEDIIIPPRMVDIIVDGENWNP-FYPIILICGGAFIQVNEEYMRSLEILSKK 214
                KL + V+ +++P  +V  I++     P F   +         V E+  R     +  
Sbjct:   164 VRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADV 223

Query:   215 ---LKFIGVDPMVKTSK-ALKDV----QPELE-KLRQKAVSKVYYF--FLKGHGKEIYNE 263
                L  + V  + K  +  L+ +    +P    ++ Q A+ K  +F  FL G+ +    E
Sbjct:   224 RGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKE 283

Query:   264 VRAAYIDTMNKVLSAHFRAYIQALEKLQLD-IATSSDLIGVE-ARSTGLFSRGREPLKNR 321
             +R  Y++T++K+  +++R+Y+  L K+Q + +A   DL+GVE     G FS+    L++R
Sbjct:   284 IRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSK--PSLRSR 341

Query:   322 SAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVAL 379
             + +F LG R +++   E++ P L+PH A+    +YP+E LFRS H  L+D +  EYL   
Sbjct:   342 NTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFIC 401

Query:   380 LFEFV 384
              F FV
Sbjct:   402 EF-FV 405

GO:0015031 "protein transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0010008 "endosome membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1330304 Vps52 "vacuolar protein sorting 52 (yeast)" [Mus musculus (taxid:10090)]

 Score = 502 (181.8 bits), Expect = 5.9e-48, P = 5.9e-48
 Identities = 121/365 (33%), Positives = 204/365 (55%)

Query:    36 EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
             E D + D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct:    44 ELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query:    96 KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
             +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SISS+I+ LQE+S  M ++L+NR+ 
Sbjct:   104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQA 163

Query:   156 AESKLAKFVEDIIIPPRMVDIIVDGENWNP-FYPIILICGGAFIQVNE-EYMRSLEILSK 213
                KL + V+ +++P  +V  I++     P F   +         V E E M +      
Sbjct:   164 VRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEAMGTAACADV 223

Query:   214 K--LKFIGVDPMVKTSK-ALKDV----QPELE-KLRQKAVSKVYYF--FLKGHGKEIYNE 263
             +  L  + V  + K  +  L+ +    +P    ++ Q A+ K  +F  FL G+ +    E
Sbjct:   224 RGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQAALLKYRFFYQFLLGNERATAKE 283

Query:   264 VRAAYIDTMNKVLSAHFRAYIQALEKLQLD-IATSSDLIGVE-ARSTGLFSRGREPLKNR 321
             +R  Y++T++K+  +++R+Y+  L K+Q + +A   DL+GVE     G FS+    L++R
Sbjct:   284 IRDEYVETLSKIYLSYYRSYVGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSK--PSLRSR 341

Query:   322 SAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVAL 379
             + +F LG R  ++   E++ P L+PH A+    +YP+E LFRS H  L+D +  EYL   
Sbjct:   342 NTIFTLGTRGTVISPAELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFIC 401

Query:   380 LFEFV 384
              F  V
Sbjct:   402 EFFIV 406

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005768 "endosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0010668 "ectodermal cell differentiation" evidence=IMP

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0048611 "embryonic ectodermal digestive tract development" evidence=IMP

RGD|3618 Vps52 "vacuolar protein sorting 52 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 498 (180.4 bits), Expect = 1.8e-47, P = 1.8e-47
 Identities = 121/365 (33%), Positives = 203/365 (55%)

Query:    36 EEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYI 95
             E D + D+  L+ ++  ++     ++V   L  G  LR Y+K VE  L+Q+E  SI+DYI
Sbjct:    44 ELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYI 103

Query:    96 KESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKV 155
             +ES+N+ SLH+QI  CDA+L +ME +L  FQ+++ SIS +I+ LQE+S  M ++L+NR+ 
Sbjct:   104 QESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISCEIRTLQEQSGAMNIRLRNRQA 163

Query:   156 AESKLAKFVEDIIIPPRMVDIIVDGENWNP-FYPIILICGGAFIQVNEEYMRSLEILSKK 214
                KL + V+ +++P  +V  I++     P F   +         V E+  R     +  
Sbjct:   164 VRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADV 223

Query:   215 ---LKFIGVDPMVKTSK-ALKDV----QPELE-KLRQKAVSKVYYF--FLKGHGKEIYNE 263
                L  + V  + K  +  L+ +    +P    ++ Q A+ K  +F  FL G+ +    E
Sbjct:   224 RGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKE 283

Query:   264 VRAAYIDTMNKVLSAHFRAYIQALEKLQLD-IATSSDLIGVE-ARSTGLFSRGREPLKNR 321
             VR  Y++T++K+  +++R+Y+  L K+Q + +A   DL+GVE     G FS+    L++R
Sbjct:   284 VRDEYVETLSKIYLSYYRSYVGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSK--PSLRSR 341

Query:   322 SAVFALGDRINILK--EIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVAL 379
             + +F LG R  ++   E++ P L+PH A+    +YP+E LFRS H  L+D +  EYL   
Sbjct:   342 NTIFTLGTRGAVISPAELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFIC 401

Query:   380 LFEFV 384
              F FV
Sbjct:   402 EF-FV 405

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0010008 "endosome membrane" evidence=IEA

GO:0010668 "ectodermal cell differentiation" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0048611 "embryonic ectodermal digestive tract development" evidence=ISO

DICTYBASE|DDB_G0271856 vps52C "Vps52 / Sac2 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 318 (117.0 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
 Identities = 99/311 (31%), Positives = 164/311 (52%)

Query:    25 DLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLR 84
             DLG    D+T    +  DD S+   +QEL        +   L KG  LR+Y+K VENNL 
Sbjct:    30 DLGEL--DITTILGSDFDDDSISAADQEL--------IKEALIKGYDLRQYSKDVENNLN 79

Query:    85 QVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSM 144
             Q++  +I DY +E DN ++L+ QI+  D +L  +ET+L+ +  ++ SI S++  LQE+SM
Sbjct:    80 QMDKMTINDYFQERDNFLTLYTQIQVVDGVLETLETMLNNYYNDLKSIGSEMNSLQERSM 139

Query:   145 DMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENW-NPFYPIILICGGAFIQVNEE 203
              M  KL NRK+ + KL+KF++ +II P     + + +N  + +Y   L      I + ++
Sbjct:   140 SMNHKLNNRKLFDEKLSKFLDAVIIDPEFYSDLTNSKNGIDDYYISNLTKLDTKITLFDD 199

Query:   204 YMR-SLEILSK---KLKFIGVDPMVKTSKALKD-VQPELEKL-----RQKAVSKV-YYF- 251
             Y + S  I +    +L  + V  + K  K L   +    +KL     +QK ++ + Y F 
Sbjct:   200 YKKISPTICAMNEPQLSKLTVASIQKIQKYLATTLNSNFKKLAEKKQKQKQLANMGYLFQ 259

Query:   252 FLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATS-SDLIGV-EARSTG 309
             FL  + + I +EV  +Y++   K  ++ ++AY+ AL KL  D A   +D I +   +   
Sbjct:   260 FLFKYSQYIASEVILSYVENNEKYFTSFYKAYVSALLKLLEDGAPGKNDFINIGTGKIKS 319

Query:   310 LFSRGREPLKN 320
             LF+    P KN
Sbjct:   320 LFNS--TPSKN 328

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0293496 vps52B "Vps52 / Sac2 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 335 (123.0 bits), Expect = 3.0e-29, P = 3.0e-29
 Identities = 101/358 (28%), Positives = 181/358 (50%)

Query:     7 NQGDNSFAEKNETPKNVFDLGAFVGDLTFEEDASGDDISLEGLEQELEE-CKNHDVVANI 65
             N  +    EK++  +  FDL     DLT   +  G+   +E  E ++E   K+  V+AN 
Sbjct:    88 NTNNKEQIEKDDNMEFKFDL-----DLT-TINIMGE--GMEDFENQIERYAKDEQVIANC 139

Query:    66 LSKGTTLREYTKGVENNLRQV-----EL--DSIQDYIKESDNLVSLHDQIRDCDAILSQM 118
             L KG  L +++K V  +L +      EL  D I DY+ E +    L+  I +   +LS  
Sbjct:   140 LDKGIDLSKFSKEVGESLERCDKEMNELYQDIIPDYVNERETFAILYKTITESTDLLSGF 199

Query:   119 ETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIV 178
             E +LS FQ E+ +IS +++ LQE S+    K  NRK    +L K +E++ I   ++ ++ 
Sbjct:   200 EDMLSKFQGELTNISKEMRNLQELSITQNSKCVNRKKVVERLDKIIEEVSISDDLIHLLT 259

Query:   179 DGENWNPFYPIILICGGAFIQVNEEYMRSL----EILSKKLKFIGV--DP-----MVKTS 227
              GE  + +   + I       ++ + +  +    EI    LK + V  D      MV+ +
Sbjct:   260 QGEVNDQYLQYLSIFSKKIGHISSQKIDGVFATGEIEEVTLKLLNVVLDKIHRFFMVQFN 319

Query:   228 KALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQAL 287
             + +KD+Q    K ++  + +  + FL  H + +   +   Y +   ++ S+++R+YI  L
Sbjct:   320 Q-IKDIQSLQSKQQEFTLYRQAFIFLYKHTRRVARILFDQYKEIAERIYSSYYRSYITFL 378

Query:   288 EKLQLDIATSSDLIGV-EARSTGLFSRGREPLKNRSAVFALGDRINILKEIDQPALIP 344
             EKLQ++  + +DLIG+ E+++ G FS     LK +S+++ +  R  IL E++ P L P
Sbjct:   379 EKLQMEPTSRNDLIGMHESKTRGFFSSKSNKLKCKSSIYTIETRYQILNELETPPLKP 436

GO:0003674 "molecular_function" evidence=ND

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0005622 "intracellular" evidence=IC

ASPGD|ASPL0000013581 vps52 [Emericella nidulans (taxid:162425)]

 Score = 293 (108.2 bits), Expect = 5.4e-25, P = 5.4e-25
 Identities = 93/340 (27%), Positives = 170/340 (50%)

Query:    57 KNHDVVANILSKGTTLREYTKGVENNLRQVELD----SIQDYIKESDNLVSLHDQIRDCD 112
             K   +V +I   G +L  + +  E++ R V  D    ++Q + +E D    LH+ I  CD
Sbjct:   113 KPDQLVEDIDFCGLSLEGFLQKPESD-RSVRSDVSAQTLQQFEEERDKFQDLHNAISGCD 171

Query:   113 AILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPR 172
              +   +E  LS F+ E+G++S++I+ LQ +S+ +   L+NR+  E  L   VE+I I P 
Sbjct:   172 DVSKSVELYLSDFRNELGAVSAEIESLQSRSVQLNAMLENRRNVEQLLGPAVEEISISPA 231

Query:   173 MVDIIVDG---ENWNPFYPII---------LICGGAFIQVNEEYMRSLEILSKKLKFIGV 220
              V +I +G   ENW      I          I   +  +  ++    LE + KK      
Sbjct:   232 AVRMIAEGPIDENWVKSLNEIETRTASIEAKIASSSSTKAIDDVRPLLEDVKKKAVERIR 291

Query:   221 DPMVKTSKALKDVQPELEKLRQKAVSK---VYYFFLKGHGKEIYNEVRAAYIDTMNKVLS 277
             D +V   +AL+      + ++Q+ + K   +Y +  + H   + +E+  AY++TM     
Sbjct:   292 DYLVSQVRALRSPNINAQIIQQQRLVKYKDLYSYLSRAHST-LASEITQAYVNTMRWYYL 350

Query:   278 AHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKNRSA--VFALGDRINILK 335
             +HF  Y QAL K++L  +  ++++G +  +    + G     N +A   F+LG RI+IL+
Sbjct:   351 SHFTRYHQALAKIKLYPSDRNEVLGGDPHTQKSGNLGPGGRVNAAAHDPFSLGRRIDILR 410

Query:   336 EIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 375
               +Q A+  ++AE  +  +  E+ FR+ +  L+D  ++EY
Sbjct:   411 TGNQMAISSYLAEEDTSFHGIEIPFRNFNLALLDNVSAEY 450

GO:0003674 "molecular_function" evidence=ND

GO:0006896 "Golgi to vacuole transport" evidence=IEA

GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA

GO:0030029 "actin filament-based process" evidence=IEA

GO:0000938 "GARP complex" evidence=IEA

UNIPROTKB|G4N4U8 MGG_06020 "Vps52/Sac2 family protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 284 (105.0 bits), Expect = 4.9e-24, P = 4.9e-24
 Identities = 101/352 (28%), Positives = 169/352 (48%)

Query:    41 GDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKG-VENNLRQV-ELDSIQDYIKES 98
             G+ ++LE  E+        D+  +    G +LRE     VE     +    +I++Y ++ 
Sbjct:    94 GEGLTLE--EKLPTPMTEEDLELDFDFGGHSLRELVSAPVETGDDDLYRPQTIEEYERDK 151

Query:    99 DNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAES 158
                  L   IR CD +LS +ET L+ F+ ++ ++S+DI+ LQ +S  + ++L NRK  E 
Sbjct:   152 TKFEELSKSIRACDDVLSSVETNLTSFRNDLANVSADIESLQARSTALNVRLDNRKAVEK 211

Query:   159 KLAKFVEDIIIPPRMVDIIVDG---ENWNPFYPII----LICGGAFIQVNEEYMRSLEIL 211
              LA  VE++ + P +V  I +G   E W      +    L    +  Q   + +  L  L
Sbjct:   212 GLAPIVEEVSVSPVIVAKISEGHIDEEWVQALKQVEKRALAHKNSANQGKSKALADLGPL 271

Query:   212 SKKLKFIGV----DPMVKTSKALKDVQPELEKLRQKAVS--KVYYFFLKGHGKEIYNEVR 265
              ++L    +    D +V   KAL+      + ++Q      K  + FL  H   +  E+ 
Sbjct:   272 LERLVLKAIERIRDFLVAQIKALRSPNINAQIIQQHNFLRFKELFVFLHKHHAILAEEIC 331

Query:   266 AAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVE--ARSTGLFSRGREPLKNRSA 323
              AY +TM       F  Y +ALEKL+L +   +D++G +  +R T L S  +       A
Sbjct:   332 QAYKNTMKWYYLTQFTRYQKALEKLKLHVLDKNDVLGHDDSSRKTVL-SSAKISGPPHDA 390

Query:   324 VFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 375
              F LG R++ILK  +Q AL  ++AE     +  EV FR+ +  L+D A++EY
Sbjct:   391 -FNLGRRLDILKTGNQQALSSYLAEEDQTTHYLEVPFRNFNLALVDNASAEY 441

GO:0005575 "cellular_component" evidence=ND

WB|WBGene00007059 vps-52 [Caenorhabditis elegans (taxid:6239)]

 Score = 243 (90.6 bits), Expect = 8.0e-18, P = 8.0e-18
 Identities = 81/295 (27%), Positives = 144/295 (48%)

Query:    36 EEDASGDDISLEGLEQELEECKNHD--VVANILSKGTTLREYTKGVENNLRQVELDSIQD 93
             + +A+    ++  LE  L + +  D  +V   ++ G  L E    V   L +    S+Q 
Sbjct:    10 KSEANDRSFTISSLEFCLSQLRKADPNLVKKAIASGDGLTESKNDVSTRLSEAHRYSVQQ 69

Query:    94 YIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNR 153
              +  S+ L  LH+Q+  CD +  +++  L  FQ  +GSI  D+K LQ +S  +  +L+NR
Sbjct:    70 CLDNSEQLAQLHNQLVHCDNVFERLQATLYSFQDNLGSIGQDMKNLQLQSHHIHQELENR 129

Query:   154 KVAESKLAKFVEDIIIPPRMVDIIVDGE-NWNPF--------YPIILIC---GGAFIQVN 201
             +    +L++FV+DI +   M+  I D + N   F        + I LI     G  + VN
Sbjct:   130 QKVRVELSQFVDDIAVSQTMMKTINDTDANDRGFLEALHELHHKITLILQRGNGDAVAVN 189

Query:   202 EEY--MRSLEILSK-KLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGK 258
             +    +  L++ +  K++   +  M +  K L + Q    +L +    + +Y FL  H  
Sbjct:   190 DTMPILEGLKLKAVVKVREWLLQKMFQFRKPLSNYQVFQHQLLK---CRFFYEFLLHHDL 246

Query:   259 EIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL-DIATSSDLIG-VE-ARSTGL 310
                 E++  YIDT++K+   +F+AY   L KL + D+AT  D +G ++ A+  GL
Sbjct:   247 ISAKELQDEYIDTISKMFFTYFKAYATRLFKLAMKDVATKEDALGSIDFAKPAGL 301

GO:0000938 "GARP complex" evidence=IPI

GO:0000138 "Golgi trans cisterna" evidence=IDA

GO:0005797 "Golgi medial cisterna" evidence=IDA

GO:0017137 "Rab GTPase binding" evidence=IPI

GO:0019905 "syntaxin binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00030154001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (709 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00025233001	SubName- Full=Chromosome chr9 scaffold_33, whole genome shotgun sequence; (826 aa)					•		•		0.522

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	385
pfam04129	511	pfam04129, Vps52, Vps52 / Sac2 family	1e-107

>gnl|CDD|217914 pfam04129, Vps52, Vps52 / Sac2 family

 Score =  323 bits (830), Expect = e-107
 Identities = 137/324 (42%), Positives = 193/324 (59%), Gaps = 51/324 (15%)

Query: 86  VELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMD 145
           VE  SIQD I ES+NL SLH+QI  CD++L +ME +L+ FQ+++ SIS DIK LQEKS +
Sbjct: 1   VERKSIQDVIDESENLASLHNQIAACDSVLERMEDMLTSFQSDLSSISQDIKFLQEKSNE 60

Query: 146 MGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYM 205
           M L+L+NR+  ESKL++FV+D+I+PP ++D I+DG+                  VNE + 
Sbjct: 61  MQLRLENRQAVESKLSQFVDDLIVPPELIDTIIDGD------------------VNEPFF 102

Query: 206 RSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKV----------------- 248
            +      K   + +D   K+SKA KDV P L+KLR KA+ K+                 
Sbjct: 103 LTALEELNKKLSLVLDQSNKSSKAPKDVDPLLDKLRLKAIEKIREYILQKIKTFRKPMTN 162

Query: 249 -------------YYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL-DI 294
                        +Y FL  + + +  E+R AYIDTMNK+  ++F+AYI+ L KLQ  ++
Sbjct: 163 YQIIQNALLKYKFFYEFLLDNNRSLALELRDAYIDTMNKIYLSYFKAYIRRLTKLQFEEV 222

Query: 295 ATSSDLIGVEARSTGLFSRG-REPLKNRSAVFALGDRINILK-EIDQPALIPHIAEASSL 352
           AT  DL+GVE  + GLF       LKN++ VF++G R  IL  ++D P ++PHIAE ++ 
Sbjct: 223 ATKDDLMGVEDTAKGLFFSSKPVSLKNKNTVFSIGKRGQILSMQLDAPIIVPHIAENNTQ 282

Query: 353 KYPYEVLFRSLHKLLMDTATSEYL 376
           KY  E LFRSL   L+D ATSEYL
Sbjct: 283 KYYIEALFRSLQLALLDNATSEYL 306

Vps52 complexes with Vps53 and Vps54 to form a multi- subunit complex involved in regulating membrane trafficking events. Length = 511

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	385
KOG1961	683	consensus Vacuolar sorting protein VPS52/suppresso	100.0
PF04129	508	Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 V	100.0
KOG2148	867	consensus Exocyst protein Sec3 [Intracellular traf	99.92
PF09763	701	Sec3_C: Exocyst complex component Sec3; InterPro:	99.92
PF06419	618	COG6: Conserved oligomeric complex COG6; InterPro:	98.09
PF10475	291	DUF2450: Protein of unknown function N-terminal do	96.83
PF04124	338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	96.41
KOG3758	655	consensus Uncharacterized conserved protein [Funct	96.39
PF04136	157	Sec34: Sec34-like family ; InterPro: IPR007265 Sec	96.24
PF11867	335	DUF3387: Domain of unknown function (DUF3387); Int	93.56
PF06148	133	COG2: COG (conserved oligomeric Golgi) complex com	90.17
PF04108	412	APG17: Autophagy protein Apg17 ; InterPro: IPR0072	90.14
PF15469	182	Sec5: Exocyst complex component Sec5	89.86
PF06148	133	COG2: COG (conserved oligomeric Golgi) complex com	89.65
PF07889	126	DUF1664: Protein of unknown function (DUF1664); In	88.95
cd00011	203	BAR_Arfaptin_like The Bin/Amphiphysin/Rvs (BAR) do	87.75
KOG2307	705	consensus Low density lipoprotein receptor [Intrac	84.64
PF08700	87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	84.07
COG4942	420	Membrane-bound metallopeptidase [Cell division and	83.77
PF06785	401	UPF0242: Uncharacterised protein family (UPF0242);	81.66
PRK04778	569	septation ring formation regulator EzrA; Provision	81.39
TIGR00606	1311	rad50 rad50. This family is based on the phylogeno	80.4
PF04048	142	Sec8_exocyst: Sec8 exocyst complex component speci	80.03

>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]

Probab=100.00  E-value=7.1e-85  Score=667.23  Aligned_cols=340  Identities=57%  Similarity=0.885  Sum_probs=330.6

Q ss_pred             ccCcccccCcccccccCCCCChhchHHHHHhhhChHHHHHHhhcCCChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHH
Q 036757           25 DLGAFVGDLTFEEDASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSL  104 (385)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~d~~~~~l~~~l~~~~~~~~v~~~L~~g~dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L  104 (385)
                      .+|+++||++|++|..++++.++++..++++|.++++|+++|+.|.|||+|+++|+++|+.++.++||+|+++++++++|
T Consensus         1 ~~~~~~~~~~~e~~~~~~~~~le~~~~~~~~~~~~e~v~~~lktg~~lr~y~~~ve~~l~k~e~~Siqdyi~es~~~~~l   80 (683)
T KOG1961|consen    1 ELGARVGDLAFEEDSRSEDISLEEVLSQLQECLDDELVKEALKTGDDLREYSKQVENELRKAERKSIQDYIKESENLASL   80 (683)
T ss_pred             CccccccccccchhcchhHHHHHHHHHHHHHhcchHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhhHHHHHhhhhhhhH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHhhhhhcCChHHHHHhhcCCCCC
Q 036757          105 HDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWN  184 (385)
Q Consensus       105 ~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i~Ipp~lI~~I~~g~~~~  184 (385)
                      |+||.+|+.+|++||++|++||++|++||+||..||+||+.|+++|+||++++.+|++||++++|||+||++|.+|+   
T Consensus        81 hNqi~~cd~Vl~rme~~L~~FQ~~L~sissDI~~lqekS~~m~~~L~Nrq~v~s~Ls~fVdd~iVpp~lI~~I~~g~---  157 (683)
T KOG1961|consen   81 HNQIRACDSVLERMETMLSSFQSDLSSISSDIKILQEKSNDMQLRLENRQAVESKLSQFVDDLIVPPELIKTIVDGD---  157 (683)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHhccccCCHHHHHHHHcCC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999   


Q ss_pred             CCcchhhhcCCcccccCH-HHHHHHHHHHHHHHhhCCCCccchhhhhhhHHHHHHHHHHHHHHHhHHH------------
Q 036757          185 PFYPIILICGGAFIQVNE-EYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYF------------  251 (385)
Q Consensus       185 ~~~~~~~~~~~~~~~v~e-~~i~~l~~L~~kl~~i~~~~~~~~~~A~~Dv~~~LekLr~kav~rir~f------------  251 (385)
                                     ||| +|++++++|++|++.++.+++.++++|++|+.|+|++||.||++|||+|            
T Consensus       158 ---------------vne~~f~~~LeeL~~Kl~~v~~dq~~k~a~a~~Dv~~lLdkLR~KAi~kir~~IlqkI~~fRkp~  222 (683)
T KOG1961|consen  158 ---------------VNEPEFLEALEELSHKLKLVELDQSNKDAKALKDVEPLLDKLRLKAIEKIREFILQKIKAFRKPM  222 (683)
T ss_pred             ---------------CCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence                           996 9999999999999999877889999999999999999999999999999            


Q ss_pred             -------------------HHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hccCCCccccccc-cccc
Q 036757          252 -------------------FLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLD-IATSSDLIGVEAR-STGL  310 (385)
Q Consensus       252 -------------------FL~~~~~~~a~El~~aYv~tmsk~Y~~~Fr~Y~~~L~KL~~~-~~~~~dlig~~~~-~~gl  310 (385)
                                         ||++|++++|.|||+|||+||+|+|.+||++|+++|+|||.. .+++.|++|++.+ ++|+
T Consensus       223 tn~qi~~Q~~LLK~k~~y~FL~~n~r~~A~Elr~aYIdTM~k~y~~yF~sY~~~L~klq~~~iat~~D~~Gi~fn~skGl  302 (683)
T KOG1961|consen  223 TNYQIPQQHALLKYKFFYEFLLENNRELALELRDAYIDTMNKIYLSYFKSYIRRLTKLQFEEIATKEDLMGIEFNASKGL  302 (683)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCccH
Confidence                               999999999999999999999999999999999999999986 9999999998866 4588


Q ss_pred             ---ccCCCCCCCCCCCccCcccHHHHHhhcCCCCcchhhhhhcCCCCChhHHHHhHHHHHHHhhhhHHHhHHhhhhc
Q 036757          311 ---FSRGREPLKNRSAVFALGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFV  384 (385)
Q Consensus       311 ---fs~~~~~~~~~~~~FsLg~R~~iL~~ld~p~ivp~iae~~~~ky~~E~iFRSl~~~LiDnat~EYlF~~~FF~~  384 (385)
                         ||+...++++++++|++|+|++||+++|+|+|+||+|+++  +||+|++|||+|+||+||||+||+||.+||.|
T Consensus       303 ~~~fsk~~~~l~~r~tvF~ig~R~~Iltq~d~p~lvphiae~~--k~~~E~lfrs~~~al~dn~tsEYlFl~efF~~  377 (683)
T KOG1961|consen  303 FFFFSKLPEPLKNRSTVFTIGKRLQILTQLDAPILVPHIAEAN--KYYIEALFRSLHLALLDNATSEYLFLEEFFAV  377 (683)
T ss_pred             HHHhccCcchhhcccceeehhhhhhhhhhccccchhhhHHhcC--CCcHHHHHHHHHHHHHhcchhHHHHHHHHHhh
Confidence               8888888999999999999999999999999999999998  99999999999999999999999999999965

>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []

Probab=100.00  E-value=6.8e-69  Score=559.35  Aligned_cols=281  Identities=53%  Similarity=0.820  Sum_probs=263.7

Q ss_pred             hhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHhhh
Q 036757           86 VELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVE  165 (385)
Q Consensus        86 le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~  165 (385)
                      +|.++|+||+++++++++||.+|++||++|++||++|.+||++|+.+|+||..||+||..|+++|+|||.++++|++||+
T Consensus         1 ~e~~si~dy~~e~~~~~~Lh~~i~~cd~~L~~le~~L~~Fq~~L~~iS~eI~~LQ~~S~~l~~~L~Nrk~~~~~L~~~i~   80 (508)
T PF04129_consen    1 VERESIQDYLKESENFADLHNQIQECDSILESLEEMLSNFQNDLGSISSEIRSLQERSSSLNVKLKNRKAVEEKLSPFID   80 (508)
T ss_pred             ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCChHHHHHhhcCCCCCCCcchhhhcCCcccccCHHHHHHHHHHHHHHHhhCCCCccchhhhhhhHHHHHHHHHHHHH
Q 036757          166 DIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAV  245 (385)
Q Consensus       166 ~i~Ipp~lI~~I~~g~~~~~~~~~~~~~~~~~~~v~e~~i~~l~~L~~kl~~i~~~~~~~~~~A~~Dv~~~LekLr~kav  245 (385)
                      +++|||++|+.|++|+                  ||+.|++++.++.+|+.....++..++++|++|+.|+|++||.||+
T Consensus        81 ~i~ipP~lI~~I~~~~------------------v~e~~~~~~~~~~~k~~~~~~~~~~~~~~a~~d~~~~Le~L~~ka~  142 (508)
T PF04129_consen   81 DIVIPPDLIRSICEGP------------------VNEQYIEELLELLKKKIFFSKDQSFKDSKAIKDVKPELEKLKNKAV  142 (508)
T ss_pred             HHcCCHHHHHhHhcCC------------------CCHHHHHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHHHHH
Confidence            9999999999999999                  9999999977777666664334567889999999999999999999


Q ss_pred             HHhHHH------------------------------HHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 036757          246 SKVYYF------------------------------FLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIA  295 (385)
Q Consensus       246 ~rir~f------------------------------FL~~~~~~~a~El~~aYv~tmsk~Y~~~Fr~Y~~~L~KL~~~~~  295 (385)
                      +|||+|                              ||++|+|++|.|||++|++||||||.++|++|+++|+||+.+.+
T Consensus       143 ~rir~fl~~kI~~lr~~~tn~q~iQ~~LLk~~~~~~FL~~~~~~~a~El~~~Yv~tM~~~Y~~~F~~Y~~~L~kl~~~~~  222 (508)
T PF04129_consen  143 ERIRDFLLKKIKSLRKPKTNSQIIQQVLLKYKELFQFLKKHSPELAKELRQAYVETMSWYYSSYFKRYIRSLEKLQLRII  222 (508)
T ss_pred             HHHHHHHHHHHHHHcCCCCchHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999                              99999999999999999999999999999999999999999988


Q ss_pred             cCC-CcccccccccccccCCCCCCCCCCCccCcccHHHHHh-hcCCCCcchhhhhhcCCCCChhHHHHhHHHHHHHhhhh
Q 036757          296 TSS-DLIGVEARSTGLFSRGREPLKNRSAVFALGDRINILK-EIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATS  373 (385)
Q Consensus       296 ~~~-dlig~~~~~~glfs~~~~~~~~~~~~FsLg~R~~iL~-~ld~p~ivp~iae~~~~ky~~E~iFRSl~~~LiDnat~  373 (385)
                      ++. ||+|+++++.|.|.+++.+.++++++|+||+|++||+ ++++|+|+||+|++++.+||+|++|||++++|+||||+
T Consensus       223 ~~~~dL~g~~~~~~~~~~s~~~~~~~~~~~Fslg~R~~iL~~~~~~p~i~~~~a~~~~~k~~~E~iFRS~~~~L~Dn~t~  302 (508)
T PF04129_consen  223 DSKDDLIGVEDSSKGGFFSSKSSLKNRSSVFSLGRRIDILNSELDAPIIVPQIAEDNSQKYPIEEIFRSLNKALIDNATS  302 (508)
T ss_pred             cccccccCCCccccccccCCCcccccchhhhhhhHHHHHHhhcccCCccccchhhcccccCCHHHHHHHHHHHHHHhhhH
Confidence            887 9999998776544445556678899999999999999 89999999999999999999999999999999999999


Q ss_pred             HHHhHHhhhhc
Q 036757          374 EYLVALLFEFV  384 (385)
Q Consensus       374 EYlF~~~FF~~  384 (385)
                      ||+|+.+||..
T Consensus       303 Ey~F~~~FF~~  313 (508)
T PF04129_consen  303 EYLFISEFFSG  313 (508)
T ss_pred             HHHHHHHHHcc
Confidence            99999999975

>KOG2148 consensus Exocyst protein Sec3 [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.92  E-value=3e-23  Score=215.76  Aligned_cols=198  Identities=22%  Similarity=0.397  Sum_probs=188.3

Q ss_pred             HHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhh
Q 036757           73 REYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKN  152 (385)
Q Consensus        73 r~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~N  152 (385)
                      ..|++++..+|+.||++|||+.|.+++.+..|++.|+++.+++++||..|+.|...|++++.+|+.+.+++..+.++.+|
T Consensus       192 eaFaE~L~reLq~LdgANiqsilaSE~~Vn~ll~~ldaAl~~vd~~e~~Ld~yediL~hvre~iE~Ieekn~lie~~n~N  271 (867)
T KOG2148|consen  192 EAFAERLKRELQALDAANIQSILASEPLVNELLNGLDAALNEVDDMEEWLDSYEDILRHVREDIESIEEKNNLIEMQNVN  271 (867)
T ss_pred             HHHHHHHHHHHHhhhcccHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhcCChHHHHHhhcCCCCCCCcchhhhcCCcccccC-H-HHHHHHHHHHHHHHhhC---CCCccchh
Q 036757          153 RKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVN-E-EYMRSLEILSKKLKFIG---VDPMVKTS  227 (385)
Q Consensus       153 Rk~~~~~L~~~V~~i~Ipp~lI~~I~~g~~~~~~~~~~~~~~~~~~~v~-e-~~i~~l~~L~~kl~~i~---~~~~~~~~  227 (385)
                      .+++.++|..+|+++.||.++|.++.+|+                  ++ + +.++++..+-+.+..+-   -+|..-.+
T Consensus       272 n~kL~eEl~kvin~L~vp~shi~aL~egd------------------f~~a~~~ieact~aA~al~q~~~~~ldp~~l~m  333 (867)
T KOG2148|consen  272 NKKLIEELDKVINRLDVPSSHIAALTEGD------------------FDEADQGIEACTWAAKALRQLMNPNLDPIYLNM  333 (867)
T ss_pred             hHHHHHHHHHHHHhccCcHHHHHhcccCC------------------ccccchhHHHHHHHHHHHHHhhcCCCCHHHHHH
Confidence            99999999999999999999999999999                  77 3 59999999988888643   25677789


Q ss_pred             hhhhhHHHHHHHHHHHHHHHhHHH-------------------------------------------HHhhcCHHHHHHH
Q 036757          228 KALKDVQPELEKLRQKAVSKVYYF-------------------------------------------FLKGHGKEIYNEV  264 (385)
Q Consensus       228 ~A~~Dv~~~LekLr~kav~rir~f-------------------------------------------FL~~~~~~~a~El  264 (385)
                      +|++|.+.+|++|+.+++.|+.+|                                           |||..++..|.-|
T Consensus       334 ~Avkdqr~eleklk~~FvrrlssfLnnlF~~l~d~~ssd~~~hs~eL~lPnhs~~~r~l~pya~Lm~wlK~~d~k~~~~l  413 (867)
T KOG2148|consen  334 RAVKDQRAELEKLKATFVRRLSSFLNNLFASLGDFLSSDKSYHSTELTLPNHSDLHRKLRPYARLMQWLKGLDKKCYGGL  413 (867)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhHhhhhccccCCchHHHHhhhhHHHHHHHHhcCCccchhHH
Confidence            999999999999999999999987                                           9999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 036757          265 RAAYIDTMNKVLSAHFRAYIQALE  288 (385)
Q Consensus       265 ~~aYv~tmsk~Y~~~Fr~Y~~~L~  288 (385)
                      +++|++..+++|.+.+|.|+..|.
T Consensus       414 ~k~Y~dslnlLy~Re~rnFfe~lk  437 (867)
T KOG2148|consen  414 RKAYCDSLNLLYRREARNFFEELK  437 (867)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999997764

>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8

Probab=99.92  E-value=1.9e-22  Score=217.88  Aligned_cols=281  Identities=22%  Similarity=0.335  Sum_probs=225.9

Q ss_pred             ChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhh
Q 036757           71 TLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKL  150 (385)
Q Consensus        71 dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL  150 (385)
                      |..++.+++.++|..+|.++|++++.+++.+..|...|+.+...++.||..|+.|...|++++++|..++.+++.++++.
T Consensus         2 dad~~~~~L~~eL~~le~~ni~~l~~s~~~v~~l~~~ld~a~~e~d~le~~l~~y~~~L~~~~~di~~IE~qn~~Lqvq~   81 (701)
T PF09763_consen    2 DADAFEERLSKELSALEAANIHSLLESEKQVNSLMEYLDEALAECDELESWLSLYDVELNSVRDDIEYIESQNNGLQVQS   81 (701)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhHH
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHhhhhhcCChHHHHHhhcCCCCCCCcchhhhcCCcccccC-HHHH----HHHHHHHHHHHhhCC-----
Q 036757          151 KNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVN-EEYM----RSLEILSKKLKFIGV-----  220 (385)
Q Consensus       151 ~NRk~~~~~L~~~V~~i~Ipp~lI~~I~~g~~~~~~~~~~~~~~~~~~~v~-e~~i----~~l~~L~~kl~~i~~-----  220 (385)
                      .|++.+.++|..+++.+.|||+..+.|.+++                  ++ +..+    +++..|.+.|..++.     
T Consensus        82 ~N~k~L~~eL~~Ll~~l~i~~~~l~~L~~~~------------------l~~~~~l~~~e~a~~~L~~Al~~i~~~~~~~  143 (701)
T PF09763_consen   82 ANQKLLLNELENLLDTLSIPEEHLEALRNAS------------------LSSPDGLEKIEEAAEALYKALKAIRPDLEKL  143 (701)
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHhcCC------------------CCCcccHHHHHHHHHHHHHHHHhcccccccC
Confidence            9999999999999999999999999999999                  75 3333    458889999999653     


Q ss_pred             CCccchhhhhhhHHHHHHHHHHHHHHHhHHH---------------------------------------------HHhh
Q 036757          221 DPMVKTSKALKDVQPELEKLRQKAVSKVYYF---------------------------------------------FLKG  255 (385)
Q Consensus       221 ~~~~~~~~A~~Dv~~~LekLr~kav~rir~f---------------------------------------------FL~~  255 (385)
                      +|+...+.|++|.+..+++++.+|+.|+.+|                                             |||+
T Consensus       144 ~~~~~~M~Av~er~~~~~~~~~~F~~r~~~~l~~~F~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~L~~ys~Li~~lK~  223 (701)
T PF09763_consen  144 DPGLGQMRAVKERREEYEKVSDKFCKRLSRFLNNMFKNLVDELLSDKDSFSQSGKLSLPKHSSLHNELLPYSGLILWLKE  223 (701)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCChHHHHHHHHHHHhHHHHHHHHHH
Confidence            3567789999999999999999999999988                                             9999


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CcccccccccccccCCC--------CCCCCCCCccC
Q 036757          256 HGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSS-DLIGVEARSTGLFSRGR--------EPLKNRSAVFA  326 (385)
Q Consensus       256 ~~~~~a~El~~aYv~tmsk~Y~~~Fr~Y~~~L~KL~~~~~~~~-dlig~~~~~~glfs~~~--------~~~~~~~~~Fs  326 (385)
                      .+|..|..|+++|+.+|+++|.+.|+.++..+.+.-.+..... +.        .+|+.+.        ..-+.+.... 
T Consensus       224 ~d~~~y~~L~~~Y~~~~~~ly~~e~~~~~~~~k~~~~k~~~~~~~~--------~~~~~~~~~~~~~~~~~~~sr~~~~-  294 (701)
T PF09763_consen  224 VDPESYQALIKAYNSSMSKLYEREIRDFFEALKKSISKASGDENDE--------SLFTSSSPELSTEWISLRKSRKLTL-  294 (701)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhh--------hcccccccchhcccccccccccccC-
Confidence            9999999999999999999999999999999877654322211 10        1111110        0000001100 


Q ss_pred             cccHHHHHhhcCCCCcchhhhhhcCCCCChhHHHHhHHHHHHHhhhhHHHhHHhhhhc
Q 036757          327 LGDRINILKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLVALLFEFV  384 (385)
Q Consensus       327 Lg~R~~iL~~ld~p~ivp~iae~~~~ky~~E~iFRSl~~~LiDnat~EYlF~~~FF~~  384 (385)
                        .|...+...+    .+......+.+-.+-..|..+.--+...|..|=.||.+||+.
T Consensus       295 --~~s~~~~~~~----~~~~~~~~~~~~~~~~a~~~~L~el~pl~~~EQ~Fi~~FFhl  346 (701)
T PF09763_consen  295 --DRSKTLRNID----MWAPSPKSSGKLRFDEAFEQALEELEPLCIREQNFIIDFFHL  346 (701)
T ss_pred             --CCCccchhcc----cccCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence              1111111111    000012234555678889999999999999999999999985

This entry represents the subunit Exoc1 (Sec3). Sec3 binds to the C-terminal cytoplasmic domain of GLYT1 (glycine transporter protein 1). Sec3 is the exocyst component that is closest to the plasma membrane docking site and it serves as a spatial landmark in the plasma membrane for incoming secretory vesicles. Sec3 is recruited to the sites of polarised membrane growth through its interaction with Rho1p, a small GTP-binding protein.

>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation

Probab=98.09  E-value=0.00066  Score=73.59  Aligned_cols=181  Identities=19%  Similarity=0.387  Sum_probs=144.5

Q ss_pred             HHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHHHH
Q 036757           77 KGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVA  156 (385)
Q Consensus        77 ~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk~~  156 (385)
                      ..||+++-......+++|=.-..++..+...++.-....+.|.+.|..-..+=+.+-.++..|+++...+..|-+     
T Consensus        23 ~~iE~~~l~~~~~~L~~f~~v~~~l~~~~~~v~~l~~~~~~~~~~l~~~~~~t~~ll~~~~~L~~~~~~~~~k~~-----   97 (618)
T PF06419_consen   23 SDIEKRLLKINQEFLKEFSPVNRQLKRLQSDVDKLNSSCDQMQDRLSAAKSETSDLLEEASELREQKEELELKKK-----   97 (618)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence            456777777777777777777777888888888888888888888888888888888899999888877777766     


Q ss_pred             HHHHHHhhhhhcCChHHHHHhhcC--CCCCCCcchhhhcCCcccccCHHHHHHHHHH---HHHHHhhCCCCccchhhhhh
Q 036757          157 ESKLAKFVEDIIIPPRMVDIIVDG--ENWNPFYPIILICGGAFIQVNEEYMRSLEIL---SKKLKFIGVDPMVKTSKALK  231 (385)
Q Consensus       157 ~~~L~~~V~~i~Ipp~lI~~I~~g--~~~~~~~~~~~~~~~~~~~v~e~~i~~l~~L---~~kl~~i~~~~~~~~~~A~~  231 (385)
                        .|..|.++..++|+=+.+|..|  +                  ||++|...+...   +..-+.+-   .....+|-.
T Consensus        98 --ll~~f~~~f~Ls~~E~~~L~~~~~~------------------v~~~FF~~L~r~~~I~~~c~~LL---~~~~~~ag~  154 (618)
T PF06419_consen   98 --LLDAFLERFTLSEEEEDALTSGEEP------------------VDDEFFDALDRVQKIHEDCKILL---STENQRAGL  154 (618)
T ss_pred             --HHHHHHHhCCCCHHHHHHHhCCCCC------------------CCHHHHHHHHHHHHHHHHHHHHh---CCCCchHHH
Confidence              8999999999999999999999  7                  999999886554   33333321   112456778


Q ss_pred             hHHHHHHHHHHHHHHHhHHH------------------------HHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036757          232 DVQPELEKLRQKAVSKVYYF------------------------FLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQAL  287 (385)
Q Consensus       232 Dv~~~LekLr~kav~rir~f------------------------FL~~~~~~~a~El~~aYv~tmsk~Y~~~Fr~Y~~~L  287 (385)
                      ++.....+...+|-+|++.|                        +|+ +.|.++.++.+.|+.+=++..   +++|+.+|
T Consensus       155 ~iM~~~~~~~e~a~erl~~w~q~e~~~l~~~~~~~~~~l~~al~~L~-~rp~lf~~~l~~~~~~R~~~l---~~~F~~aL  230 (618)
T PF06419_consen  155 EIMEQMSKYLERAYERLYRWVQRECRSLNLDNPEVSPLLRRALRYLR-ERPVLFNYCLDEFAEARSKAL---LRRFLDAL  230 (618)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccchHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence            88888999999999999998                        564 569999999999999998876   45567777


Q ss_pred             HH
Q 036757          288 EK  289 (385)
Q Consensus       288 ~K  289 (385)
                      ..
T Consensus       231 t~  232 (618)
T PF06419_consen  231 TR  232 (618)
T ss_pred             cC
Confidence            54

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known

Probab=96.83  E-value=0.47  Score=46.79  Aligned_cols=168  Identities=16%  Similarity=0.258  Sum_probs=112.4

Q ss_pred             CChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhh
Q 036757           70 TTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLK  149 (385)
Q Consensus        70 ~dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~k  149 (385)
                      ..|..|...|+..|...=.+.=.+|.+.-.++.+|+.++..|...+..+-..|..=++.+..-+=+|-.++.       +
T Consensus        38 ekLs~~ldvVe~~L~~~I~~~s~~f~~a~~~v~el~~~l~~a~~~~~~~R~~L~~~~~~~~~~~L~Il~~~r-------k  110 (291)
T PF10475_consen   38 EKLSHYLDVVEKKLSREISEKSDSFFQAMSSVQELQDELEEALVICKNLRRNLKSADENLTKSGLEILRLQR-------K  110 (291)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-------H
Confidence            445566666677776666666677888888888999999999888888888887777777665555555544       4


Q ss_pred             hhhHHHHHHHHHHhhhhhcCChHHHHHhhcCCCCCCCcchhhhcCCcccccCHHHHHHHHHHHHHHHhhCCCCccchhhh
Q 036757          150 LKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKA  229 (385)
Q Consensus       150 L~NRk~~~~~L~~~V~~i~Ipp~lI~~I~~g~~~~~~~~~~~~~~~~~~~v~e~~i~~l~~L~~kl~~i~~~~~~~~~~A  229 (385)
                      -+|-+.+...|..+-.-...-+.+-..+.+|+                      |..++.-+..-.+.+.   ..++..+
T Consensus       111 r~~l~~ll~~L~~i~~v~~~~~~l~~ll~~~d----------------------y~~Al~li~~~~~~l~---~l~~~~c  165 (291)
T PF10475_consen  111 RQNLKKLLEKLEQIKTVQQTQSRLQELLEEGD----------------------YPGALDLIEECQQLLE---ELKGYSC  165 (291)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------------------HHHHHHHHHHHHHHHH---hcccchH
Confidence            45555666666665444444455555555555                      7777776666555553   2345567


Q ss_pred             hhhHHHHHHHHHHHHHHHhHHH---HHhhcCHHHHHHHHHHHH
Q 036757          230 LKDVQPELEKLRQKAVSKVYYF---FLKGHGKEIYNEVRAAYI  269 (385)
Q Consensus       230 ~~Dv~~~LekLr~kav~rir~f---FL~~~~~~~a~El~~aYv  269 (385)
                      ++++...|+.+.....+++-.-   -...-+|..|..|..||.
T Consensus       166 ~~~L~~~L~e~~~~i~~~ld~~l~~~~~~Fd~~~Y~~v~~AY~  208 (291)
T PF10475_consen  166 VRHLSSQLQETLELIEEQLDSDLSKVCQDFDPDKYSKVQEAYQ  208 (291)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            7777777777766666666543   233567888888988884

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []

Probab=96.41  E-value=0.84  Score=45.93  Aligned_cols=104  Identities=13%  Similarity=0.237  Sum_probs=73.7

Q ss_pred             ChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhh
Q 036757           71 TLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKL  150 (385)
Q Consensus        71 dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL  150 (385)
                      .|.+-...+..+++.+...+-..|++..+....+...+..+...++.+.+-|..++......+..-..       +....
T Consensus        18 ~L~~~~~~l~~ql~~La~~~y~~fi~~~~~~~~i~~~~~~~~~~l~~L~~~l~~L~~~~~~f~~~~~~-------~~~~r   90 (338)
T PF04124_consen   18 SLSEEIASLDAQLQSLAFRNYKTFIDNAECSSDIRQELSSLSDSLDSLLDSLPELDEACQRFSSKAQK-------ISEER   90 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHH
Confidence            34555778889999999999999999888888777777776666666666555555554444444433       33334


Q ss_pred             hhHHHHHHHHHHhhhhhcCChHHHHHhhcCC
Q 036757          151 KNRKVAESKLAKFVEDIIIPPRMVDIIVDGE  181 (385)
Q Consensus       151 ~NRk~~~~~L~~~V~~i~Ipp~lI~~I~~g~  181 (385)
                      +....+......+++-+.+|.=|=..|.+|.
T Consensus        91 ~~~~~~l~~~~~l~diLElP~Lm~~ci~~g~  121 (338)
T PF04124_consen   91 KKASLLLENHDRLLDILELPQLMDTCIRNGN  121 (338)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhccc
Confidence            4445566677788888889988888888887

>KOG3758 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.39  E-value=0.51  Score=51.08  Aligned_cols=157  Identities=13%  Similarity=0.345  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-------HHHHHHHHHHhhhhhhhhhhHHHHHHHHHHhhhhhcCChHH
Q 036757          101 LVSLHDQIRDCDAILSQMETLLSGFQAEIGSI-------SSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRM  173 (385)
Q Consensus       101 l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~I-------S~eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i~Ipp~l  173 (385)
                      +..+..+++.-...+..|-.--.++.+++.+.       =.....++++...+..|.+       -+..|.++..++.+=
T Consensus        73 f~~i~~~l~~v~e~v~km~~t~~~l~s~ls~~k~~t~dli~~t~~l~~e~~~le~r~k-------ii~~Fl~~fqLs~~E  145 (655)
T KOG3758|consen   73 FKEIKRRLDRVSEDVEKMANTCDKLKSNLSTSKATTQDLIQKTETLKEEAAQLELRKK-------IINAFLDNFQLSSEE  145 (655)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHhcccChHH
Confidence            44445555555555555555555555555543       4567788888888888887       788999999999999


Q ss_pred             HHHhhc-CCCCCCCcchhhhcCCcccccCHHHHHHH---HHHHHHHHhhCCCCccchhhhhhhHHHHHHHHHHHHHHHhH
Q 036757          174 VDIIVD-GENWNPFYPIILICGGAFIQVNEEYMRSL---EILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVY  249 (385)
Q Consensus       174 I~~I~~-g~~~~~~~~~~~~~~~~~~~v~e~~i~~l---~~L~~kl~~i~~~~~~~~~~A~~Dv~~~LekLr~kav~rir  249 (385)
                      .+.|.+ |+                  ||+.|.+.|   ++++.--+.+-..+.   -.|.-++.....+...+|-+|+.
T Consensus       146 ~~~L~~~g~------------------i~e~FF~vL~rvqeIh~~~~~Ll~~~~---~~Ag~eime~M~~~~E~a~erl~  204 (655)
T KOG3758|consen  146 LDLLTESGP------------------IDEDFFKVLDRVQEIHDNCRLLLQTPN---QTAGLEIMEKMALIQEGAYERLF  204 (655)
T ss_pred             HHHHhcCCc------------------chHHHHHHHHHHHHHHHHHHHHHhccc---hhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999 88                  999888774   445444444211122   34666777777888888889988


Q ss_pred             HH--------------------------HHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036757          250 YF--------------------------FLKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEK  289 (385)
Q Consensus       250 ~f--------------------------FL~~~~~~~a~El~~aYv~tmsk~Y~~~Fr~Y~~~L~K  289 (385)
                      +|                          ||. ..|.+++.+.+.|+..-++..   ++.|+.+|.+
T Consensus       205 r~~qs~e~~~l~~t~~~E~~~il~kA~~~L~-~~p~lfk~~ide~~~aR~~~L---~~~Fisaltr  266 (655)
T KOG3758|consen  205 RWSQSSECRNLTGTDSQEVSPILRKAFVFLS-SRPVLFKYLIDEVGTARSQSL---LRQFISALTR  266 (655)
T ss_pred             HHhhhHhhcCCccccchhhHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHH---HHHHHHHHcc
Confidence            87                          555 679999999999998888765   6778888854

>PF04136 Sec34: Sec34-like family ; InterPro: IPR007265 Sec34 and Sec35 form a sub-complex in a seven-protein complex that includes Dor1

Probab=96.24  E-value=0.36  Score=43.74  Aligned_cols=126  Identities=13%  Similarity=0.212  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHH---HHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHhhhhhcCChHHHHHhhcCCCCCCC
Q 036757          110 DCDAILSQMETL---LSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPF  186 (385)
Q Consensus       110 ~cd~~L~~mE~~---L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i~Ipp~lI~~I~~g~~~~~~  186 (385)
                      .|+.+|..+++.   |+.-+..-..|++.=..+++.+..|-..=+.-..+-+.|..-+.-..-=+.+.+.+..+.     
T Consensus        15 ~~~~ll~~~~~~~~~l~~l~~~~~~Vs~kT~~l~~~ce~Ll~eq~~L~~~ae~I~~~L~yF~~Ld~itr~Ln~p~-----   89 (157)
T PF04136_consen   15 ECDQLLDQTDEILDQLDELQEQYNSVSEKTNSLHEACEQLLEEQTRLEELAEEISEKLQYFEELDPITRRLNSPG-----   89 (157)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhHHHHHHHHcCCC-----
Confidence            344444433333   455556667788888888888777776666556666666666666665556666665543     


Q ss_pred             cchhhhcCCcccccCHHHHHHHHHHHHHHHhhCCCCccchhhhhhhHHHHHHHHHHHHHHHhHHHHH
Q 036757          187 YPIILICGGAFIQVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFL  253 (385)
Q Consensus       187 ~~~~~~~~~~~~~v~e~~i~~l~~L~~kl~~i~~~~~~~~~~A~~Dv~~~LekLr~kav~rir~fFL  253 (385)
                       |         ...++.|..-|..|+..|.|+...|.++++.+   -...+..+..+|+.=||.||.
T Consensus        90 -~---------sV~~~~F~~~L~~LD~cl~Fl~~h~~fkea~~---Y~~rf~q~ltRAl~lIk~y~~  143 (157)
T PF04136_consen   90 -S---------SVNSDSFKPMLSRLDECLEFLEEHPNFKEAEV---YLIRFRQCLTRALTLIKNYVV  143 (157)
T ss_pred             -C---------cccchHHHHHHHHHHHHHHHHHHhhhhhhhHH---HHHHHHHHHHHHHHHHHHHHH
Confidence             1         10348999999999999999988787766543   234677888899999987743

This complex is thought to be important for tethering vesicles to the Golgi [].; GO: 0006886 intracellular protein transport, 0005801 cis-Golgi network, 0016020 membrane

>PF11867 DUF3387: Domain of unknown function (DUF3387); InterPro: IPR021810 This domain is functionally uncharacterised

Probab=93.56  E-value=9.1  Score=38.53  Aligned_cols=195  Identities=14%  Similarity=0.254  Sum_probs=114.7

Q ss_pred             HHHHHHhhcCCChHHHHHHHH-hhhHHhhhhhHHHHHH-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 036757           60 DVVANILSKGTTLREYTKGVE-NNLRQVELDSIQDYIK-----ESDNLVSLHDQIRDCDAILSQMETLLSGFQAEI---G  130 (385)
Q Consensus        60 ~~v~~~L~~g~dLr~ys~~ve-~eL~~le~~~Iq~yi~-----~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L---~  130 (385)
                      +++++.+ +|.|+..|-..-. +.+..+ .+.+...+.     ....|......+..+=.++.+-.. ...|..++   .
T Consensus        25 ~~~~~~~-~~~d~~~~~~~~~~~~l~~l-~~a~~~il~~~~~~~r~~F~~~~~~l~~~~~l~~p~~~-a~~~~~d~~~f~  101 (335)
T PF11867_consen   25 EILRDFF-HGFDYSKFFEASPFERLELL-DDAVDHILSLEDEERRKRFLKLVKELSKAYALCLPDPE-AEEYRDDIAFFQ  101 (335)
T ss_pred             HHHHHHh-cCCChHHhcCCChHHHHHHH-HHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHH
Confidence            7777777 9999988844322 222222 223333333     134455555566655554444333 45677777   4


Q ss_pred             hHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHhhhhhcCChHHHHHhhcCCCCCCCcchhhhcCCcccccCHHHHHHHHH
Q 036757          131 SISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEI  210 (385)
Q Consensus       131 ~IS~eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i~Ipp~lI~~I~~g~~~~~~~~~~~~~~~~~~~v~e~~i~~l~~  210 (385)
                      .|+.-|..+-.....     .+...+..++.++|++-+.+..+++.+-.+.+..|  |+++        ++++|++.+..
T Consensus       102 ~ir~~i~k~~~~~~~-----~~~~~~~~~i~~Lid~~I~s~~v~~i~~~~~~~~~--disi--------ld~eFl~~v~~  166 (335)
T PF11867_consen  102 AIRAAIRKLYSDDDG-----PDIKEVEEKIRQLIDESIASEGVVDIFEAAGLKKP--DISI--------LDDEFLEEVKK  166 (335)
T ss_pred             HHHHHHHHhccCCCC-----CCHHHHHHHHHHHHHHHHhcccchhHHhhcCCCCC--Chhh--------cCHHHHHHHHh
Confidence            455665555433221     46778899999999999999998776655432222  5555        78888766544


Q ss_pred             HHHHHHhhCCCCccchhhhhhhHHHHHHHHHHHHHHHhHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Q 036757          211 LSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAHF--RAYIQALE  288 (385)
Q Consensus       211 L~~kl~~i~~~~~~~~~~A~~Dv~~~LekLr~kav~rir~fFL~~~~~~~a~El~~aYv~tmsk~Y~~~F--r~Y~~~L~  288 (385)
                      ..        .+   .        -.++.|+...-.+|+  =....+|.-|..+..-+-++|.+|-....  ..|+..|.
T Consensus       167 ~~--------~k---~--------~~~e~L~~~l~~~I~--~~~~~N~~~~~~fsErLe~iI~~Y~~~~i~~~e~~~eLi  225 (335)
T PF11867_consen  167 MK--------SK---N--------LKAELLEKLLRDEIK--VRMKENPVRYKKFSERLEEIIEKYNNRSISSEEVIEELI  225 (335)
T ss_pred             cc--------Cc---h--------HHHHHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence            41        11   1        122233333333333  22448888888999999999998876643  36667776


Q ss_pred             Hhhhh
Q 036757          289 KLQLD  293 (385)
Q Consensus       289 KL~~~  293 (385)
                      +|..+
T Consensus       226 ~la~e  230 (335)
T PF11867_consen  226 KLAKE  230 (335)
T ss_pred             HHHHH
Confidence            66543

This domain is found in bacteria and archaea. This presumed domain is typically between 255 to 340 amino acids in length. This domain is found associated with PF04851 from PFAM, PF04313 from PFAM.

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex

Probab=90.17  E-value=0.27  Score=42.88  Aligned_cols=81  Identities=27%  Similarity=0.430  Sum_probs=27.1

Q ss_pred             CChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhh
Q 036757           70 TTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLK  149 (385)
Q Consensus        70 ~dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~k  149 (385)
                      .||+.|.+.+.++|-.+=..+.++|++=+.+       +...+..+..|..-|..|+.++..+.++|...++   .++..
T Consensus        33 ~dL~~~~~~L~~~Li~lIN~dY~dFv~Ls~~-------L~g~~~~i~~l~~~L~~~~~~v~~~~~~l~~~~~---~i~~~  102 (133)
T PF06148_consen   33 KDLRSYSKELKNELIELINDDYADFVSLSTN-------LVGMDEKIEELRKPLSQFREEVESVRDELDNTQE---EIEDK  102 (133)
T ss_dssp             ------------------------------------------------HHHHHHHHHHHHHHHHHS-STTHH---HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH-------HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence            4788888888888887777777766665554       4455556666777777777777777666655555   47777


Q ss_pred             hhhHHHHHHHH
Q 036757          150 LKNRKVAESKL  160 (385)
Q Consensus       150 L~NRk~~~~~L  160 (385)
                      ++.|+.+...-
T Consensus       103 l~~~~~l~~~k  113 (133)
T PF06148_consen  103 LEERKELREEK  113 (133)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            77777776654

The COG complex comprises eight proteins COG1-8 and plays critical roles in Golgi structure and function [].; PDB: 2JQQ_A.

>PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells

Probab=90.14  E-value=26  Score=36.48  Aligned_cols=86  Identities=21%  Similarity=0.304  Sum_probs=59.3

Q ss_pred             hhhHHHHHHhhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHHHHH-------------------
Q 036757           88 LDSIQDYIKESDNLVSL----HDQIRDCDAILSQMETLLSGFQAEIGSISSDI--KILQEK-------------------  142 (385)
Q Consensus        88 ~~~Iq~yi~~~~~l~~L----~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI--~~LQe~-------------------  142 (385)
                      .-+..||+.+ +.+..|    ...|++|..+-..++..+..|..+|..+++.+  ..+.+-                   
T Consensus       112 ~ktL~DFVd~-~~v~~L~~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s  190 (412)
T PF04108_consen  112 PKTLYDFVDE-DSVEILRENLKISIDELQAIQEQLDNSLLQFDNDLRKLKKQLINKRLKDYELLAPFQSSLGSSPSSSSS  190 (412)
T ss_pred             CCcHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhccccccccCCCCCcccc
Confidence            3456778876 678888    44556667777888999999999999999999  444332                   


Q ss_pred             hhhhhhhhhhHHHHHHHHHHhhhhhcCChHHH
Q 036757          143 SMDMGLKLKNRKVAESKLAKFVEDIIIPPRMV  174 (385)
Q Consensus       143 S~~m~~kL~NRk~~~~~L~~~V~~i~Ipp~lI  174 (385)
                      +..++.-++-...++..|..+++.++===|++
T Consensus       191 ~~~~~~i~~~l~~le~ema~lL~sLt~HfDqC  222 (412)
T PF04108_consen  191 NPLMSTILKELHSLEQEMASLLESLTNHFDQC  222 (412)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            23456666667777777777777665333333

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Autophagy protein 17 (Apg17) is required for activating Apg1 protein kinases. This entry also contains Autophagy protein 11 which is involved in cytoplasm to vacuole transport (Cvt) and pexophagy. ; GO: 0006914 autophagy

>PF15469 Sec5: Exocyst complex component Sec5

Probab=89.86  E-value=11  Score=34.28  Aligned_cols=94  Identities=13%  Similarity=0.192  Sum_probs=59.2

Q ss_pred             hhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHH
Q 036757           81 NNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAI------LSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRK  154 (385)
Q Consensus        81 ~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~------L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk  154 (385)
                      .+|+.+=.++...|++-.+.+..+|.++......      ++.+++.|..=..--..+...|-.       -..+..+-+
T Consensus         2 ~~lk~LV~~Nf~~Fv~~k~tid~i~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~pll~-------~~~k~~~l~   74 (182)
T PF15469_consen    2 EDLKSLVKENFDKFVSCKDTIDDIYEEFRNMKTEAQQDSGTEKLEESLNEASSKANSVFKPLLE-------RREKADKLR   74 (182)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHc-------cHHHHHHHH
Confidence            3566667788899999999999999999765443      444444444322222222222222       222344445


Q ss_pred             HHHHHHHHhhhhhcCChHHHHHhhcCC
Q 036757          155 VAESKLAKFVEDIIIPPRMVDIIVDGE  181 (385)
Q Consensus       155 ~~~~~L~~~V~~i~Ipp~lI~~I~~g~  181 (385)
                      .+..-|..+=-=+.+|-.+.+.|..|+
T Consensus        75 ~~l~~l~r~~flF~LP~~L~~~i~~~d  101 (182)
T PF15469_consen   75 NALEFLQRNRFLFNLPSNLRECIKKGD  101 (182)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHcCc
Confidence            555555555555679999999999999

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex

Probab=89.65  E-value=0.51  Score=41.13  Aligned_cols=16  Identities=31%  Similarity=0.474  Sum_probs=0.0

Q ss_pred             CCCChhchHHHHHhhh
Q 036757           42 DDISLEGLEQELEECK   57 (385)
Q Consensus        42 ~d~~~~~l~~~l~~~~   57 (385)
                      .-.++++|-.+|..|.
T Consensus        24 ~~~~Le~L~~dL~~~~   39 (133)
T PF06148_consen   24 RYVSLEDLRKDLRSYS   39 (133)
T ss_dssp             ----------------
T ss_pred             CCCCHHHHHHHHHHHH
Confidence            3456666666777665

The COG complex comprises eight proteins COG1-8 and plays critical roles in Golgi structure and function [].; PDB: 2JQQ_A.

>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function

Probab=88.95  E-value=6.4  Score=34.72  Aligned_cols=78  Identities=15%  Similarity=0.288  Sum_probs=57.5

Q ss_pred             hHHHHHHHHhhhHHhhh--hhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhh
Q 036757           72 LREYTKGVENNLRQVEL--DSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLK  149 (385)
Q Consensus        72 Lr~ys~~ve~eL~~le~--~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~k  149 (385)
                      |.+....|.++|.++..  ..-...+.  .++..|-..+++|..+-..+.+-...-+.|+..|..++..+|..=..|..|
T Consensus        41 m~~A~~~v~kql~~vs~~l~~tKkhLs--qRId~vd~klDe~~ei~~~i~~eV~~v~~dv~~i~~dv~~v~~~V~~Le~k  118 (126)
T PF07889_consen   41 MSDAVASVSKQLEQVSESLSSTKKHLS--QRIDRVDDKLDEQKEISKQIKDEVTEVREDVSQIGDDVDSVQQMVEGLEGK  118 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            34444555555554432  12223333  568889999999999999999999999999999999999999977777766


Q ss_pred             hh
Q 036757          150 LK  151 (385)
Q Consensus       150 L~  151 (385)
                      +.
T Consensus       119 i~  120 (126)
T PF07889_consen  119 ID  120 (126)
T ss_pred             HH
Confidence            64

The region featured in this family is approximately 100 amino acids long.

>cd00011 BAR_Arfaptin_like The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin-like proteins, a dimerization module that binds and bends membranes

Probab=87.75  E-value=26  Score=33.36  Aligned_cols=156  Identities=17%  Similarity=0.185  Sum_probs=95.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHhhhhhhhhhhHHHHHHHHHHhhhhhc------CCh
Q 036757          100 NLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDI--KILQEKSMDMGLKLKNRKVAESKLAKFVEDII------IPP  171 (385)
Q Consensus       100 ~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI--~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i~------Ipp  171 (385)
                      .+..+-......-..+.+-+..|..|=.+||.-+.+.  +.+.-=+..+..--+||..+...|.+|+.++.      ||.
T Consensus        20 ~Ll~~~~~~~~~~~~l~q~q~~lG~~f~~l~~~~~~~a~~~f~~~~~a~r~~~k~g~~ll~~l~~~~~~l~T~~~kai~D   99 (203)
T cd00011          20 SVLQLGRALTAHLYSLSQTQHALGDAFADLSQKDPELAGEEFGYNAEAQKLLCKNGETLLGAVNFFVSSINTLVTKAIED   99 (203)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcch
Confidence            3555555555566667777777777777777665444  12333333444555899999999999999874      333


Q ss_pred             HHHHHhhcCCCCCCCcchhhhcCCcccccCHHHHHHHHHHHHHHHhhC--CCCcc-------chh-hhhhhHHHHHHHHH
Q 036757          172 RMVDIIVDGENWNPFYPIILICGGAFIQVNEEYMRSLEILSKKLKFIG--VDPMV-------KTS-KALKDVQPELEKLR  241 (385)
Q Consensus       172 ~lI~~I~~g~~~~~~~~~~~~~~~~~~~v~e~~i~~l~~L~~kl~~i~--~~~~~-------~~~-~A~~Dv~~~LekLr  241 (385)
                      ... +|-.=..                 .--+|...+-++    +...  .+|.+       +.+ .-+++-+..++|||
T Consensus       100 T~l-TI~~ye~-----------------aR~EY~a~~l~~----ke~~~e~~~~~~~~~~k~r~~q~~~~~~k~kf~kLr  157 (203)
T cd00011         100 TLL-TVKQYEA-----------------ARLEYDAYRLDL----KELSLEPRDDTAGTRGRLRSAQATFQEHRDKFEKLR  157 (203)
T ss_pred             HHH-HHHHHHH-----------------HHHhHHHHHHHH----HHhcccCCcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            322 1111110                 111233332222    2221  11211       111 12455566899999


Q ss_pred             HHHHHHhHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 036757          242 QKAVSKVYYFFLKGHGKEIYNEVRAAYIDTMNKVLSAH  279 (385)
Q Consensus       242 ~kav~rir~fFL~~~~~~~a~El~~aYv~tmsk~Y~~~  279 (385)
                      .-++.|+.  ||-++.-.+..---..|.++|..||..-
T Consensus       158 ~Dv~~Kl~--lL~~~r~~~l~~qL~~~~~al~~y~~~~  193 (203)
T cd00011         158 GDVAIKLK--FLEENKIKVMHKQLLLFHNTVSAYFAGN  193 (203)
T ss_pred             HHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999  9999888888888889999999998754

The BAR domain of Arfaptin-like proteins, also called the Arfaptin domain, is a dimerization, lipid binding and curvature sensing module present in Arfaptins, PICK1, ICA69, and similar proteins. Arfaptins are ubiquitously expressed proteins implicated in mediating cross-talk between Rac, a member of the Rho family GTPases, and Arf (ADP-ribosylation factor) small GTPases. Arfaptins bind to GTP-bound Arf1, Arf5, and Arf6, with strongest binding to GTP-Arf1. Arfaptins also binds to Rac-GTP and Rac-GDP with similar affinities. The Arfs are thought to bind to the same surface as Rac, and their binding is mutually exclusive. Protein Interacting with C Kinase 1 (PICK1) plays a key role in the trafficking of AMPA receptors, which are critical for regulating synaptic strength and may be important in cellular processes involved in learning and memory. Is

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=84.64  E-value=15  Score=39.89  Aligned_cols=113  Identities=24%  Similarity=0.349  Sum_probs=71.5

Q ss_pred             Cccccc-ccCCCCChhchHHHHHhhhChHHHHHHhhcCCChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHH
Q 036757           33 LTFEED-ASGDDISLEGLEQELEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDC  111 (385)
Q Consensus        33 ~~~~~~-~~~~d~~~~~l~~~l~~~~~~~~v~~~L~~g~dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~c  111 (385)
                      |-|+-+ ...+|||.|..=.+...+.+=+.++.      |||-|-+.+.+.+-.|=.+---||+.=+.+++.|       
T Consensus        21 LcFdk~eFmkedFdve~f~s~~R~~v~letLrd------dLrlylksl~~aMieLIN~DYADFVnLStnLVgl-------   87 (705)
T KOG2307|consen   21 LCFDKTEFMKEDFDVERFMSLARQKVDLETLRD------DLRLYLKSLQNAMIELINDDYADFVNLSTNLVGL-------   87 (705)
T ss_pred             cccChhhhccccCCHHHHHHHHhccCCHHHHHH------HHHHHHHHHHHHHHHHHhhhHHHHHhhhhhhccH-------
Confidence            345555 56778887775444444444455554      7888988888888777666666666666666655       


Q ss_pred             HHHHHHHHHHHHHHHHHHHh----HHHHHHHHHHHhhhhhhhhhhHHHHHHHHH
Q 036757          112 DAILSQMETLLSGFQAEIGS----ISSDIKILQEKSMDMGLKLKNRKVAESKLA  161 (385)
Q Consensus       112 d~~L~~mE~~L~~Fq~~L~~----IS~eI~~LQe~S~~m~~kL~NRk~~~~~L~  161 (385)
                      |..|.+|+.=|..+..++.+    |+.-+..+++   .++.+..||+..+..+.
T Consensus        88 d~aln~i~qpL~qlreei~s~rgsV~ea~~alr~---q~se~~~~Re~k~~lld  138 (705)
T KOG2307|consen   88 DDALNKIEQPLNQLREEIKSTRGSVGEAERALRQ---QCSELCSNREKKIELLD  138 (705)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence            45555566666556555544    4555566664   47777778777665544

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi

Probab=84.07  E-value=6.1  Score=31.39  Aligned_cols=68  Identities=18%  Similarity=0.410  Sum_probs=41.0

Q ss_pred             HHhhhChHHHHHHhhcCCChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 036757           53 LEECKNHDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMET  120 (385)
Q Consensus        53 l~~~~~~~~v~~~L~~g~dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~  120 (385)
                      ..++..+-.++++...-..|+.-.+....+|+.+=..+-.+||..++.+..+...+..-...|..+..
T Consensus        12 ~~~~l~~~s~~~i~~~~~~L~~~i~~~~~eLr~~V~~nY~~fI~as~~I~~m~~~~~~l~~~l~~l~~   79 (87)
T PF08700_consen   12 FKDLLKNSSIKEIRQLENKLRQEIEEKDEELRKLVYENYRDFIEASDEISSMENDLSELRNLLSELQQ   79 (87)
T ss_pred             HHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333344455555555666777777778888777777777777777666665555444444433333

Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1 [].

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]

Probab=83.77  E-value=34  Score=36.02  Aligned_cols=71  Identities=10%  Similarity=0.190  Sum_probs=59.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHhhhhh
Q 036757           97 ESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDI  167 (385)
Q Consensus        97 ~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i  167 (385)
                      ..+....|..+|.+....+++++.-|..+..+|..++..|..+..+-..+..+-.+|+....++-..+...
T Consensus        57 ~~~~~~kL~~~lk~~e~~i~~~~~ql~~s~~~l~~~~~~I~~~~~~l~~l~~q~r~qr~~La~~L~A~~r~  127 (420)
T COG4942          57 QQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRKQIADLNARLNALEVQEREQRRRLAEQLAALQRS  127 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            35778899999999999999999999999999999999999999998888888866666665555555554

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function

Probab=81.66  E-value=37  Score=34.82  Aligned_cols=124  Identities=11%  Similarity=0.207  Sum_probs=81.6

Q ss_pred             hHHHHHhhhCh---HHHHHHhhcCCChHHHHHHHHhhhHH---hhh---hhHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 036757           49 LEQELEECKNH---DVVANILSKGTTLREYTKGVENNLRQ---VEL---DSIQDYIKESDNLVSLHDQIRDCDAILSQME  119 (385)
Q Consensus        49 l~~~l~~~~~~---~~v~~~L~~g~dLr~ys~~ve~eL~~---le~---~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE  119 (385)
                      =|..|..-+.+   .-|+++.++...||...+.|++.-..   +..   .-........+-+...-..++.-...+...+
T Consensus        61 re~qlk~aa~~llq~kirk~~e~~eglr~i~es~~e~q~e~~qL~~qnqkL~nqL~~~~~vf~k~k~~~q~LE~li~~~~  140 (401)
T PF06785_consen   61 REKQLKTAAGQLLQTKIRKITEKDEGLRKIRESVEERQQESEQLQSQNQKLKNQLFHVREVFMKTKGDIQHLEGLIRHLR  140 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence            34556555544   56788888999999998887753221   111   1111222222223333333444444444555


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHhhhhhcCChH
Q 036757          120 TLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPR  172 (385)
Q Consensus       120 ~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i~Ipp~  172 (385)
                      +.=..++-.|..++.++....++|..++..|..-.+....|+..-..-.+||.
T Consensus       141 EEn~~lqlqL~~l~~e~~Ekeeesq~LnrELaE~layqq~L~~eyQatf~eq~  193 (401)
T PF06785_consen  141 EENQCLQLQLDALQQECGEKEEESQTLNRELAEALAYQQELNDEYQATFVEQH  193 (401)
T ss_pred             HHHHHHHHhHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence            55567889999999999999999999999999999999999887777666664

>PRK04778 septation ring formation regulator EzrA; Provisional

Probab=81.39  E-value=85  Score=34.01  Aligned_cols=164  Identities=15%  Similarity=0.140  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHhhhhhhhhhhHHHHHHHHHHhhhhhcCChHH
Q 036757          101 LVSLHDQIRDCDAILSQMETLLSGFQAEIGSISS-------DIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIIPPRM  173 (385)
Q Consensus       101 l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~-------eI~~LQe~S~~m~~kL~NRk~~~~~L~~~V~~i~Ipp~l  173 (385)
                      +..|+..|..-...-..++.-.......|..+..       +|..|++.-.--...+.+.+.+.+.|..+-..+.   .+
T Consensus       291 Id~Lyd~lekE~~A~~~vek~~~~l~~~l~~~~e~~~~l~~Ei~~l~~sY~l~~~e~~~~~~lekeL~~Le~~~~---~~  367 (569)
T PRK04778        291 IDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDRVKQSYTLNESELESVRQLEKQLESLEKQYD---EI  367 (569)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHccccCchhHHHHHHHHHHHHHHHHHHH---HH
Confidence            4555555544433334444444444444444444       4444444333223346667888888888777776   24


Q ss_pred             HHHhhcCCCCCCCcchhhhcCCcccccC-HHHHHHHHHHHHHHHhhCCCCccchhhhhhhHHHHHHHHHHHHHHHhHHHH
Q 036757          174 VDIIVDGENWNPFYPIILICGGAFIQVN-EEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFF  252 (385)
Q Consensus       174 I~~I~~g~~~~~~~~~~~~~~~~~~~v~-e~~i~~l~~L~~kl~~i~~~~~~~~~~A~~Dv~~~LekLr~kav~rir~fF  252 (385)
                      ...+....                  +. ..-.+.+..+.+++..+...     -...++....|.+--..|..++..| 
T Consensus       368 ~~~i~~~~------------------~~ysel~e~leel~e~leeie~e-----q~ei~e~l~~Lrk~E~eAr~kL~~~-  423 (569)
T PRK04778        368 TERIAEQE------------------IAYSELQEELEEILKQLEEIEKE-----QEKLSEMLQGLRKDELEAREKLERY-  423 (569)
T ss_pred             HHHHHcCC------------------CCHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            44555555                  33 33444455566666555321     1111111122222223333333322 


Q ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036757          253 LKGHGKEIYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQL  292 (385)
Q Consensus       253 L~~~~~~~a~El~~aYv~tmsk~Y~~~Fr~Y~~~L~KL~~  292 (385)
                       +..-..+-..+++..+--+...|..+|..--..+.+|..
T Consensus       424 -~~~L~~ikr~l~k~~lpgip~~y~~~~~~~~~~i~~l~~  462 (569)
T PRK04778        424 -RNKLHEIKRYLEKSNLPGLPEDYLEMFFEVSDEIEALAE  462 (569)
T ss_pred             -HHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence             111112333333444444455566666655555555553

>TIGR00606 rad50 rad50

Probab=80.40  E-value=1.4e+02  Score=35.80  Aligned_cols=66  Identities=18%  Similarity=0.234  Sum_probs=53.2

Q ss_pred             hhHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhhHH
Q 036757           89 DSIQDYIKE--SDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRK  154 (385)
Q Consensus        89 ~~Iq~yi~~--~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL~NRk  154 (385)
                      ..|++|+..  ..++..+...+......++.++.-+......+..++.+|..++.+-..+...+..|+
T Consensus       958 ~~i~~y~~~~~~~qL~~~e~el~~~~~~ie~le~e~~~l~~~i~~l~kel~~~~~~kr~l~dnL~~~~ 1025 (1311)
T TIGR00606       958 KDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRK 1025 (1311)
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            347777776  345777888888887888888888888888888889999999888888888888883

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane

Probab=80.03  E-value=25  Score=31.13  Aligned_cols=81  Identities=15%  Similarity=0.255  Sum_probs=68.6

Q ss_pred             ChHHHHHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhh
Q 036757           71 TLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKL  150 (385)
Q Consensus        71 dLr~ys~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~cd~~L~~mE~~L~~Fq~~L~~IS~eI~~LQe~S~~m~~kL  150 (385)
                      .+++..+.++..|..+=.++-++|=+.=..+..+...|.+|..-+..+-..|..-...|+.-+.+++.|-.+|.....-+
T Consensus        44 ~f~~~~~~~~~~L~~vV~eh~q~Fn~sI~sy~~i~~~i~~sq~~i~~lK~~L~~ak~~L~~~~~eL~~L~~~s~~~~~mi  123 (142)
T PF04048_consen   44 EFEELKKRIEKALQEVVNEHYQGFNSSIGSYSQILSSISESQERIRELKESLQEAKSLLGCRREELKELWQRSQEYKEMI  123 (142)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            34455667778888777888888888888899999999999999999999999999999999999999999887755555


Q ss_pred             h
Q 036757          151 K  151 (385)
Q Consensus       151 ~  151 (385)
                      +
T Consensus       124 ~  124 (142)
T PF04048_consen  124 E  124 (142)
T ss_pred             H
Confidence            4

The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0015031 protein transport, 0000145 exocyst

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	385
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 46/274 (16%), Positives = 83/274 (30%), Gaps = 76/274 (27%)

Query: 32  DLT-FEEDASGDDISLEGLE---QELEECKNHDVVANILSKGTTLREYTKGVENNLRQVE 87
            L+ F   A    I    L     ++ +     VV  +       ++           + 
Sbjct: 377 RLSVFPPSA---HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ------PKESTIS 427

Query: 88  LDSIQ-DYIKESDNLVSLHDQIRDCDAILSQMETLLSGFQAEIGSISSDIKILQEKSMDM 146
           + SI  +   + +N  +LH  I D   I    +             S D+        D 
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFD-------------SDDLIPPYL---DQ 471

Query: 147 ------GLKLKNRKVAESKLAKFVEDIIIPPRMVD--IIVDGENWNPFYPIILICGGAFI 198
                 G  LKN +  E ++  F   + +  R ++  I  D   WN    I         
Sbjct: 472 YFYSHIGHHLKNIEHPE-RMTLF-RMVFLDFRFLEQKIRHDSTAWNASGSI--------- 520

Query: 199 QVNEEYMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGK 258
                 + +L+ L     +I             D  P+ E+L           FL    +
Sbjct: 521 ------LNTLQQLKFYKPYI------------CDNDPKYERL-----VNAILDFLPKIEE 557

Query: 259 EIYNEVRAAYIDTMNKVLSAHFRA-YIQALEKLQ 291
            +     + Y D +   L A   A + +A +++Q
Sbjct: 558 NLI---CSKYTDLLRIALMAEDEAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 53/194 (27%)

Query: 145 DMG-LKLKNRKVAESKLAKFVEDIIIPPRMVDIIVDGENWNPFYPIILICGGAFIQVNEE 203
           + G  + + + +       FV++        D             +            ++
Sbjct: 10  ETGEHQYQYKDILSVFEDAFVDNF-------D----------CKDV------------QD 40

Query: 204 YMRSLEILSKKLKFIGVDPMVKTSKALKDVQPELEKLRQKAVSKVYYFFLKGHGKE---I 260
             +S  ILSK+     +D ++ +  A+         L  K    V  F  +        +
Sbjct: 41  MPKS--ILSKE----EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 261 YNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSTGLFSRGREPLKN 320
            + ++           S   R YI+  ++L  D    +    V        SR +  LK 
Sbjct: 95  MSPIKTEQRQP-----SMMTRMYIEQRDRLYNDNQVFAKY-NV--------SRLQPYLKL 140

Query: 321 RSAVFALGDRINIL 334
           R A+  L    N+L
Sbjct: 141 RQALLELRPAKNVL 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	385
1m1j_C	409	Fibrinogen gamma chain; coiled coils, disulfide ri	82.48

>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C

Probab=82.48  E-value=12  Score=37.68  Aligned_cols=79  Identities=13%  Similarity=0.146  Sum_probs=49.2

Q ss_pred             HHHHHhhhHHhhhhhHHHHHHhhhhHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 036757           76 TKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDC---------------DAILSQMETLLSGFQAEIGSISSDIKILQ  140 (385)
Q Consensus        76 s~~ve~eL~~le~~~Iq~yi~~~~~l~~L~~qI~~c---------------d~~L~~mE~~L~~Fq~~L~~IS~eI~~LQ  140 (385)
                      -+.|.++|+.|| ..++..-.....+..|.+.|+.|               ......|.+.+..++..+......|..||
T Consensus        33 e~~V~~~l~~LE-~~l~elsn~ts~v~~Lvk~iq~~~~~~Q~~~~d~~e~~tq~skkml~~~~~~e~~~~~~~~~i~~l~  111 (409)
T 1m1j_C           33 RLTTDGELLEIE-GLLQQATNSTGSIEYLIQHIKTIYPSEKQTLPQSIEQLTQKSKKIIEEIIRYENTILAHENTIQQLT  111 (409)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCSSTTCCSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            334445555552 23334444444455555556555               44566777778888888888888888888


Q ss_pred             HHhhhhhhhhhhHHH
Q 036757          141 EKSMDMGLKLKNRKV  155 (385)
Q Consensus       141 e~S~~m~~kL~NRk~  155 (385)
                      ++-..++.++.+-+.
T Consensus       112 ~~~~~~~~~i~~l~~  126 (409)
T 1m1j_C          112 DMHIMNSNKITQLKQ  126 (409)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHH
Confidence            887777666664433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00