Citrus Sinensis ID: 036837

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
MARSGRLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVDPN
cccccccccccccccccccccccccccccccccHHHHHHHHHHcccEEEEcccccEEEEccHHHHHHHHHHHHHHHcccccccccccccccccEEEEcHHHHHHHHHHHHHHHHcccccccc
ccccccccccccccccccccEEccHHHHccccHHHHHHHHHHcccEEEEEcccEcEEEEccHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccEccccHHHHHHHHHHHEHcHcccccc
marsgrlggrqvrpgpkpypvignllepggkphksLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGyveencpagkaigfgqaafhtslnlssntifsnnlvdpn
marsgrlggrqvrpgpkpYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSlnlssntifsnnlvdpn
MARSGRLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVDPN
***********************************LANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIF********
*****************PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVD**
**********QVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVDPN
**********QVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLV***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MARSGRLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKNYLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVDPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query122 2.2.26 [Sep-21-2011]
Q8VWZ7 493 Geraniol 8-hydroxylase OS N/A no 0.885 0.219 0.370 4e-19
O23976 490 7-ethoxycoumarin O-deethy N/A no 0.918 0.228 0.349 7e-18
D1MI46 495 Geraniol 8-hydroxylase OS N/A no 0.836 0.206 0.365 3e-14
O64635 511 Cytochrome P450 76C4 OS=A no no 0.959 0.228 0.281 8e-13
O64900 488 (S)-N-methylcoclaurine 3' N/A no 0.573 0.143 0.457 1e-12
O64899 487 (S)-N-methylcoclaurine 3' N/A no 0.573 0.143 0.457 2e-12
O64636 512 Cytochrome P450 76C1 OS=A no no 0.950 0.226 0.277 2e-12
P49264 496 Cytochrome P450 71B1 OS=T N/A no 0.590 0.145 0.444 4e-12
P58049 496 Cytochrome P450 71B11 OS= no no 0.590 0.145 0.416 2e-11
Q9ZU07 496 Cytochrome P450 71B12 OS= no no 0.590 0.145 0.416 4e-11
>sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1 Back     alignment and function desciption
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 80/162 (49%), Gaps = 54/162 (33%)

Query: 14  PGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILK--- 70
           PGP P P IG+L   G +PHKSLA L+K HG IMSL+LG +TT+V+SS +MAK +L+   
Sbjct: 32  PGPSPLPFIGSLHLLGDQPHKSLAKLSKKHGPIMSLKLGQITTIVISSSTMAKEVLQKQD 91

Query: 71  ---------------NYLR---------------RKKIN--------------------- 79
                          N  +               RK +N                     
Sbjct: 92  LAFSSRSVPNALHAHNQFKFSVVWLPVASRWRSLRKVLNSNIFSGNRLDANQHLRTRKVQ 151

Query: 80  DLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVDP 121
           +L+ Y  +N  +G+A+  G+AAF TSLNL SN IFS +L DP
Sbjct: 152 ELIAYCRKNSQSGEAVDVGRAAFRTSLNLLSNLIFSKDLTDP 193
Hydroxylase involved in the biosynthesis of hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine. Also able to hydroxylate in vitro nerol and to catalyze 3'-hydroxylation of the flavanone naringenin to form eriodictyol. No activity with apigenin, kaempferol, p-coumaric acid and ferulic acid as substrates.
Catharanthus roseus (taxid: 4058)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 5EC: 2
>sp|O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1 Back     alignment and function description
>sp|D1MI46|C76BA_SWEMU Geraniol 8-hydroxylase OS=Swertia mussotii GN=CYP76B10 PE=1 SV=1 Back     alignment and function description
>sp|O64635|C76C4_ARATH Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=3 SV=1 Back     alignment and function description
>sp|O64900|C80B2_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1 Back     alignment and function description
>sp|O64899|C80B1_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1 Back     alignment and function description
>sp|O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1 Back     alignment and function description
>sp|P49264|C71B1_THLAR Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1 Back     alignment and function description
>sp|P58049|C71BB_ARATH Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZU07|C71BC_ARATH Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
355526575 501 geraniol-10-hydroxylase [Camptotheca acu 0.942 0.229 0.382 4e-23
297742026 594 unnamed protein product [Vitis vinifera] 0.991 0.203 0.371 3e-22
225427085 498 PREDICTED: cytochrome P450 76C4 [Vitis v 0.991 0.242 0.371 3e-22
7406712 499 putative ripening-related P-450 enzyme [ 0.983 0.240 0.388 1e-21
225426693 499 PREDICTED: cytochrome P450 76C4 [Vitis v 0.983 0.240 0.388 1e-21
359474456 443 PREDICTED: LOW QUALITY PROTEIN: cytochro 0.991 0.273 0.433 2e-21
224058639 493 cytochrome P450 [Populus trichocarpa] gi 0.893 0.221 0.386 4e-21
255641226 516 unknown [Glycine max] 0.860 0.203 0.358 7e-21
356505481 516 PREDICTED: cytochrome P450 76C4-like [Gl 0.860 0.203 0.358 2e-20
359474277 499 PREDICTED: LOW QUALITY PROTEIN: 7-ethoxy 0.975 0.238 0.369 2e-20
>gi|355526575|gb|AES93118.1| geraniol-10-hydroxylase [Camptotheca acuminata] Back     alignment and taxonomy information
 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 65/170 (38%), Positives = 90/170 (52%), Gaps = 55/170 (32%)

Query: 8   GGRQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAK 66
           G ++   GPKP+PVIGNLL+  G +PHKSLANL K HG +M+L+LG +TTVVVSS +MAK
Sbjct: 31  GCKKASTGPKPFPVIGNLLDVVGNQPHKSLANLAKTHGPLMTLKLGQITTVVVSSSTMAK 90

Query: 67  AILKNY----------------------------------LRR----------------- 75
            IL+N+                                  LR+                 
Sbjct: 91  QILQNHDLYFSNRYTRDAIRALNQDQFSVIWLPVVTRWRNLRKILNLYMLSTERLGANQP 150

Query: 76  ---KKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVDPN 122
              +K+ +L+ YV ++C A  ++  GQAAF T +NL+S TIFS +L DP+
Sbjct: 151 IRCQKVEELIAYVRQSCQASVSVDIGQAAFRTMINLTSKTIFSVDLADPS 200

Source: Camptotheca acuminata

Species: Camptotheca acuminata

Genus: Camptotheca

Family: Cornaceae

Order: Cornales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297742026|emb|CBI33813.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225427085|ref|XP_002276561.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera] Back     alignment and taxonomy information
>gi|225426693|ref|XP_002281735.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359474456|ref|XP_003631472.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 76C4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224058639|ref|XP_002299579.1| cytochrome P450 [Populus trichocarpa] gi|222846837|gb|EEE84384.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255641226|gb|ACU20890.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356505481|ref|XP_003521519.1| PREDICTED: cytochrome P450 76C4-like [Glycine max] Back     alignment and taxonomy information
>gi|359474277|ref|XP_003631428.1| PREDICTED: LOW QUALITY PROTEIN: 7-ethoxycoumarin O-deethylase-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
UNIPROTKB|D1MI46 495 CYP76B10 "Geraniol 8-hydroxyla 0.5 0.123 0.573 7.6e-24
TAIR|locus:2100982 498 CYP76C7 ""cytochrome P450, fam 0.532 0.130 0.476 3.7e-20
TAIR|locus:2043605 512 CYP76C2 ""cytochrome P450, fam 0.483 0.115 0.491 2.7e-16
TAIR|locus:2012693 511 CYP76C6 ""cytochrome P450, fam 0.483 0.115 0.406 1e-15
UNIPROTKB|Q69X58 500 CYP76M7 "Ent-cassadiene C11-al 0.590 0.144 0.438 2.2e-15
TAIR|locus:504955652 340 AT3G61035 [Arabidopsis thalian 0.434 0.155 0.555 8.8e-15
UNIPROTKB|Q8VWZ7 493 CYP76B6 "Geraniol 8-hydroxylas 0.893 0.221 0.420 7.6e-13
TAIR|locus:2043694 511 CYP76C4 ""cytochrome P450, fam 0.647 0.154 0.440 7.7e-12
TAIR|locus:2139084 516 CYP706A4 ""cytochrome P450, fa 0.459 0.108 0.483 3.1e-11
TAIR|locus:2043699 512 CYP76C1 ""cytochrome P450, fam 0.573 0.136 0.444 3.4e-11
UNIPROTKB|D1MI46 CYP76B10 "Geraniol 8-hydroxylase" [Swertia mussotii (taxid:137888)] Back     alignment and assigned GO terms
 Score = 174 (66.3 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
 Identities = 35/61 (57%), Positives = 44/61 (72%)

Query:    10 RQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAIL 69
             + + PGP P P+IGNL   G +PHKSLA L K HG IM L+LG VTT+VV+S  MAK +L
Sbjct:    30 KNLPPGPSPLPLIGNLHLLGDQPHKSLAKLAKKHGPIMGLQLGQVTTIVVTSSGMAKEVL 89

Query:    70 K 70
             +
Sbjct:    90 Q 90
GO:0016099 "monoterpenoid biosynthetic process" evidence=IDA
GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=IDA
TAIR|locus:2100982 CYP76C7 ""cytochrome P450, family 76, subfamily C, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012693 CYP76C6 ""cytochrome P450, family 76, subfamily C, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q69X58 CYP76M7 "Ent-cassadiene C11-alpha-hydroxylase 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:504955652 AT3G61035 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8VWZ7 CYP76B6 "Geraniol 8-hydroxylase" [Catharanthus roseus (taxid:4058)] Back     alignment and assigned GO terms
TAIR|locus:2043694 CYP76C4 ""cytochrome P450, family 76, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139084 CYP706A4 ""cytochrome P450, family 706, subfamily A, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043699 CYP76C1 ""cytochrome P450, family 76, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015660001
SubName- Full=Chromosome chr2 scaffold_11, whole genome shotgun sequence; (498 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 5e-15
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 2e-12
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 1e-11
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 4e-11
pfam00067 461 pfam00067, p450, Cytochrome P450 5e-10
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 5e-10
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 6e-10
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 1e-08
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 2e-08
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 5e-08
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 0.002
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information 
 Score = 69.5 bits (170), Expect = 5e-15
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 2  ARSGRLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSS 61
            SG+   R + PGP+ +PV+GNL + G KPH ++A L K +G +  LR G V  VV +S
Sbjct: 26 GGSGK-HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAAS 84

Query: 62 PSMAKAILK 70
           S+A   L+
Sbjct: 85 ASVAAQFLR 93

Length = 517
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 122
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 99.9
PLN03234 499 cytochrome P450 83B1; Provisional 99.83
PLN02966 502 cytochrome P450 83A1 99.82
PLN03112 514 cytochrome P450 family protein; Provisional 99.82
PTZ00404 482 cytochrome P450; Provisional 99.82
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.81
PLN02687 517 flavonoid 3'-monooxygenase 99.81
PLN02655 466 ent-kaurene oxidase 99.81
PLN02971 543 tryptophan N-hydroxylase 99.8
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.78
PLN02183 516 ferulate 5-hydroxylase 99.77
PLN02290 516 cytokinin trans-hydroxylase 99.77
PLN02394 503 trans-cinnamate 4-monooxygenase 99.75
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.75
PLN00168 519 Cytochrome P450; Provisional 99.74
PLN03018 534 homomethionine N-hydroxylase 99.73
PLN02500 490 cytochrome P450 90B1 99.71
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.7
PLN02196 463 abscisic acid 8'-hydroxylase 99.68
PLN02936 489 epsilon-ring hydroxylase 99.67
PLN02774 463 brassinosteroid-6-oxidase 99.65
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.65
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.64
PLN02302 490 ent-kaurenoic acid oxidase 99.64
PLN02648 480 allene oxide synthase 99.62
PLN02738 633 carotene beta-ring hydroxylase 99.62
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.59
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.56
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.43
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.12
PLN02426 502 cytochrome P450, family 94, subfamily C protein 98.96
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 97.13
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=99.90  E-value=7.9e-23  Score=140.44  Aligned_cols=111  Identities=31%  Similarity=0.551  Sum_probs=98.4

Q ss_pred             CCCCCCCCCCCceeeccCCCCCC-hHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH----------------
Q 036837            9 GRQVRPGPKPYPVIGNLLEPGGK-PHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN----------------   71 (122)
Q Consensus         9 ~~~~~p~p~~~p~~g~~~~~~~~-~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~----------------   71 (122)
                      +.++||||+++|++||++++... ++..+.++.++|||++.+|+|..++|+++|+++++|++.+                
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            38899999999999999999665 8999999999999999999999999999999999999988                


Q ss_pred             ---------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHH
Q 036837           72 ---------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNT  112 (122)
Q Consensus        72 ---------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~  112 (122)
                                                             ..+.++++.+++.+.+ ...+++||+.+.+..++.++|+++
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHH
Confidence                                                   3445677777777776 222378999999999999999999


Q ss_pred             HhcCCCCC
Q 036837          113 IFSNNLVD  120 (122)
Q Consensus       113 ~fG~~~~~  120 (122)
                      +||.+++.
T Consensus       183 ~fG~rf~~  190 (489)
T KOG0156|consen  183 LFGRRFEE  190 (489)
T ss_pred             HhCCcccc
Confidence            99999985

>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
1r9o_A 477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 2e-07
4gqs_A 477 Structure Of Human Microsomal Cytochrome P450 (cyp) 5e-07
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 8e-07
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 7e-06
3k9v_A 482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 8e-06
1dt6_A 473 Structure Of Mammalian Cytochrome P450 2c5 Length = 4e-05
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure 
Iteration: 1

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1  MARSGRLGGRQVRPGPKPYPVIGNLLEPGGKP-HKSLANLTKIHGRIMSLRLGLVTTVVV 59
          MA+    G  ++ PGP P PVIGN+L+ G K   KSL NL+K++G + +L  GL   VV+
Sbjct: 1  MAKKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVL 60
Query: 60 SSPSMAKAIL 69
                K  L
Sbjct: 61 HGYEAVKEAL 70
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 2e-20
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 5e-19
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 3e-18
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 1e-17
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 1e-14
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 2e-14
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 5e-13
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 6e-13
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 9e-13
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 4e-12
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 6e-12
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 9e-12
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 1e-11
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 1e-11
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 4e-11
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 5e-11
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 2e-10
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 2e-10
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 1e-08
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 2e-08
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 2e-07
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 3e-07
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 5e-07
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 1e-06
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
 Score = 83.9 bits (208), Expect = 2e-20
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 14 PGPKP-YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71
          P  K   P +G+ LE G    K L  + + HG I ++R   +   V+   +   A+L +
Sbjct: 21 PLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSD 79
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.86
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.86
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.85
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.85
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.84
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.83
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.8
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.8
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.79
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.79
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.79
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.75
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.75
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.74
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.73
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.73
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.73
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.7
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.69
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.68
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.64
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.64
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.63
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.62
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.56
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.55
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.54
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.53
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.49
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.49
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.43
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.38
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.38
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.3
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.25
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.14
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.05
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.05
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.05
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.03
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.03
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 98.99
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 98.91
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 98.89
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 98.87
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 98.84
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 98.83
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 98.83
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 98.72
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 98.69
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 98.65
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 98.64
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 98.62
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 98.59
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 98.58
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 98.55
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 98.52
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 98.49
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 98.47
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 98.43
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 98.41
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 98.39
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 98.39
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 98.36
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 98.34
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 98.33
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 98.31
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 98.13
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 98.12
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 98.01
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 97.98
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 97.79
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 97.72
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 97.29
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 95.79
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 95.19
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 95.11
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 87.07
2diu_A96 KIAA0430 protein; structural genomics, RRM domain, 83.92
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
Probab=99.86  E-value=8.1e-22  Score=134.40  Aligned_cols=115  Identities=20%  Similarity=0.259  Sum_probs=98.4

Q ss_pred             CCCCCCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------
Q 036837            6 RLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN--------------   71 (122)
Q Consensus         6 ~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~--------------   71 (122)
                      .++.++.+|||+++|++||++.+..+++..+.+|+++||+++++++++.+.|+++||+++++|+.+              
T Consensus         9 ~~~k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~   88 (485)
T 3nxu_A            9 GLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP   88 (485)
T ss_dssp             THHHHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC
T ss_pred             hHHhhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccc
Confidence            344456799999999999999887788889999999999999999999999999999999999954              


Q ss_pred             ------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhc
Q 036837           72 ------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFS  115 (122)
Q Consensus        72 ------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG  115 (122)
                                                          +.+.++++++++.+.+.+..++++|+.+++..+++|+|+.++||
T Consensus        89 ~~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG  168 (485)
T 3nxu_A           89 VGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG  168 (485)
T ss_dssp             CGGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcC
Confidence                                                34455667777777654445678999999999999999999999


Q ss_pred             CCCCC
Q 036837          116 NNLVD  120 (122)
Q Consensus       116 ~~~~~  120 (122)
                      .+++.
T Consensus       169 ~~~~~  173 (485)
T 3nxu_A          169 VNIDS  173 (485)
T ss_dssp             CCCCG
T ss_pred             Ccccc
Confidence            98864
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 122
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 1e-19
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 6e-19
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 9e-19
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 5e-18
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 7e-18
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 4e-17
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 1e-10
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 9e-10
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 4e-06
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2c9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 14 PGPKPYPVIGNLLEPGGK-PHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71
          PGP P PVIGN+L+ G K   KSL NL+K++G + +L  GL   VV+      K  L +
Sbjct: 6  PGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 64
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.86
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.84
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.82
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.81
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.81
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.79
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.35
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.3
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 98.9
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 98.7
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 98.44
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 98.38
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 98.35
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 97.91
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 97.48
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 97.4
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 97.14
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 96.89
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 96.86
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 95.44
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 93.4
d2f9da1114 Pre-mRNA branch site protein p14 {Human (Homo sapi 88.6
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.5e-22  Score=132.69  Aligned_cols=111  Identities=20%  Similarity=0.278  Sum_probs=97.6

Q ss_pred             CCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH------------------
Q 036837           10 RQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------------   71 (122)
Q Consensus        10 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------------   71 (122)
                      ++..|||+++|++||++.+..+++.++.+++++||+||++++++.++|+++||+++++||.+                  
T Consensus         8 ~~~iPGP~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~l~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~   87 (472)
T d1tqna_           8 KLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM   87 (472)
T ss_dssp             HTTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCBCCCCSCCGGG
T ss_pred             hcCCCCCCCcCceeEHHHhhCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHhcCCcccccCCccccccccc
Confidence            34568999999999999988889999999999999999999999999999999999999965                  


Q ss_pred             --------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCC
Q 036837           72 --------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLV  119 (122)
Q Consensus        72 --------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~  119 (122)
                                                      +.+.+.++.+++.+.+.+..+.++|+.+.+.++++|+++.++||.+++
T Consensus        88 ~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~dl~~~~~~~~~~v~~~~~~G~~~~  167 (472)
T d1tqna_          88 KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNID  167 (472)
T ss_dssp             GGSTTTCCHHHHHHHHHHTTGGGSHHHHHTTHHHHHHHHHHHHHHHHHHHHHSSCEEHHHHHHHHHHHHHHHTSSCCCCC
T ss_pred             CCceeccCcHHHHHhhhhcCccccchhhhcccchhhhhhhcccccccccccccccchhhhhhhccchhhhhheecccccc
Confidence                                            344556777777787665567789999999999999999999999886


Q ss_pred             C
Q 036837          120 D  120 (122)
Q Consensus       120 ~  120 (122)
                      +
T Consensus       168 ~  168 (472)
T d1tqna_         168 S  168 (472)
T ss_dssp             G
T ss_pred             c
Confidence            4
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure