Citrus Sinensis ID: 036864

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560---
MLGMSPKIASQADGGNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSRRKANSTVSSEVGNESSQIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAFLTGS
cccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccc
cccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccEEEEccccHHEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEHEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccHEEEEHccccHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHccHEccccHcHHHHHHHHHHcccccEEEEEcccccHHHHHHHHccc
mlgmspkiasqadggntpaniKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKltypsgtatAYLInsfhtpkgaQLAKKQVAMLFRSFGFSFVWAFFQWFytagdgcgfssfptfglkAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSwgimwpiietkkgiwykaelsdsnlhgmngYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQyssrrkanstvssevgnessqivnfddqrRTEFflkdqipnwvaVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAygcgltdwslasnygKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFktgyltlssprsmffsQVFGTFLGVVLSPLVFWFfynaypigdpegtypspygllyRGIAILGvegvsslpkHCLTLAIAFFAAAIVLNIIREVLQHVDAKCkiyrfipspmcmaipfylggyFAIDMCVGSLILFVWEMkdkrsaadfapAVASGlicgdslwsVPAAILSLANLNAPICMKFLSAATNNKVDAFLTGS
mlgmspkiasqadggnTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSRRKAnstvssevgnessqivnfddQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAFLTGS
MLGMSPKIASQADGGNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSRRKANSTVSSEVGNESSQIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLaiaffaaaiVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAFLTGS
********************IKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQ**********************VNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAF****
MLGMSP**************IKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLIN***************AMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSS***********************DQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAFLTG*
**************GNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQ*********************QIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAFLTGS
MLGMSPKIASQADGGNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSR*******************NFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAFLT**
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
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MLGMSPKIASQADGGNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFGLKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSDSNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSRRKANSTVSSEVGNESSQIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYRGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLNAPICMKFLSAATNNKVDAFLTGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query563 2.2.26 [Sep-21-2011]
Q9SHY2688 Probable metal-nicotianam yes no 0.985 0.806 0.624 0.0
Q5JQD7717 Probable metal-nicotianam yes no 0.975 0.765 0.627 0.0
Q0J932686 Probable metal-nicotianam no no 0.984 0.807 0.613 0.0
Q7X660712 Probable metal-nicotianam no no 0.984 0.778 0.596 0.0
Q6H7J6727 Probable metal-nicotianam no no 0.989 0.766 0.611 0.0
Q7XKF4724 Probable metal-nicotianam no no 0.985 0.766 0.596 0.0
Q9LUN2714 Probable metal-nicotianam no no 0.987 0.778 0.592 0.0
Q6R3K4724 Probable metal-nicotianam no no 0.987 0.767 0.582 0.0
Q0E4J6694 Probable metal-nicotianam no no 0.982 0.796 0.582 0.0
Q7XRV2678 Probable metal-nicotianam no no 0.943 0.783 0.538 1e-175
>sp|Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1 Back     alignment and function desciption
 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/564 (62%), Positives = 448/564 (79%), Gaps = 9/564 (1%)

Query: 1   MLGMSPKIASQADGGNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYP 60
           + GMS  +A Q+   NTP NIK+  +GWM+ FLF VSFLGLFS+VPLRK+MI+ +KLTYP
Sbjct: 133 LFGMSDVVAKQSAEANTPLNIKNPHLGWMIGFLFVVSFLGLFSVVPLRKIMIVDFKLTYP 192

Query: 61  SGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFG 120
           SGTATA+LINSFHTP+GA+LAKKQV  L + F FSF+W FFQWF+  GDGCGF++FPTFG
Sbjct: 193 SGTATAHLINSFHTPQGAKLAKKQVRALGKFFSFSFLWGFFQWFFATGDGCGFANFPTFG 252

Query: 121 LKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSD 180
           LKA++ KF+FDFS+TYVGVGMICPY++N+SLLIGA+LSWG+MWP+I  +KG WY A+LS 
Sbjct: 253 LKAYENKFYFDFSATYVGVGMICPYLINVSLLIGAILSWGVMWPLIGAQKGKWYAADLSS 312

Query: 181 SNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSRRKANSTVSSEVGNESS 240
           ++LHG+ GYRVFIAIAM+LGDG+Y+ + ++  T   L +Q+ ++   +    ++  + + 
Sbjct: 313 TSLHGLQGYRVFIAIAMILGDGLYNFIKVLGRTVFGLYKQFKNK---DVLPINDHTSTAP 369

Query: 241 QIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPI 300
             +++DD+RRTE FLKD+IP+W AV+GY++LA+V+II VP IFHQLKWYHIL+ +  AP+
Sbjct: 370 VTISYDDKRRTELFLKDRIPSWFAVTGYVVLAIVSIITVPHIFHQLKWYHILIMYIIAPV 429

Query: 301 LAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLM 360
           LAFCNAYGCGLTDWSLAS YGK AI    +W G  +GG++AGLA+CGVMM+ VSTASDLM
Sbjct: 430 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASNGGVLAGLAACGVMMNIVSTASDLM 489

Query: 361 QDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYP-IGDPEGTYPSPYGLLY 419
           QDFKTGY+TL+SPRSMF SQ  GT +G V+SP VFW FY A+P  G P   YP+PY L+Y
Sbjct: 490 QDFKTGYMTLASPRSMFLSQAIGTAMGCVISPCVFWLFYKAFPDFGQPGTAYPAPYALVY 549

Query: 420 RGIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAI 479
           R ++ILGVEG S+LPKHCL L   FFAAA+++N IR+ L       K  RFIP PM MAI
Sbjct: 550 RNMSILGVEGFSALPKHCLMLCYIFFAAAVIVNGIRDALGP-----KWARFIPLPMAMAI 604

Query: 480 PFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANL 539
           PFYLGGYF IDMC+GSLILF+W   +K  A  ++ AVASGLICG+ +W++P++IL+LA +
Sbjct: 605 PFYLGGYFTIDMCLGSLILFIWRKLNKPKADAYSSAVASGLICGEGIWTLPSSILALAGV 664

Query: 540 NAPICMKFLSAATNNKVDAFLTGS 563
            APICMKFLS A+NNKVDAFL  S
Sbjct: 665 KAPICMKFLSMASNNKVDAFLNPS 688
May be involved in the transport of nicotianamine-chelated metals.
Arabidopsis thaliana (taxid: 3702)
>sp|Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2 Back     alignment and function description
>sp|Q0J932|YSL10_ORYSJ Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica GN=YSL10 PE=2 SV=2 Back     alignment and function description
>sp|Q7X660|YSL11_ORYSJ Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1 Back     alignment and function description
>sp|Q6H7J6|YSL14_ORYSJ Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1 Back     alignment and function description
>sp|Q7XKF4|YSL13_ORYSJ Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2 Back     alignment and function description
>sp|Q9LUN2|YSL5_ARATH Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE=1 SV=1 Back     alignment and function description
>sp|Q6R3K4|YSL8_ARATH Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana GN=YSL8 PE=1 SV=2 Back     alignment and function description
>sp|Q0E4J6|YSL8_ORYSJ Probable metal-nicotianamine transporter YSL8 OS=Oryza sativa subsp. japonica GN=YSL8 PE=2 SV=1 Back     alignment and function description
>sp|Q7XRV2|YSL6_ORYSJ Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query563
449461687 684 PREDICTED: probable metal-nicotianamine 0.982 0.808 0.749 0.0
449508404 691 PREDICTED: probable metal-nicotianamine 0.982 0.800 0.739 0.0
224081377 665 oligopeptide transporter OPT family [Pop 0.992 0.840 0.717 0.0
255582642 694 oligopeptide transporter, putative [Rici 0.991 0.804 0.745 0.0
356576981 676 PREDICTED: probable metal-nicotianamine 0.994 0.828 0.704 0.0
356576983 676 PREDICTED: probable metal-nicotianamine 0.994 0.828 0.692 0.0
147820033 692 hypothetical protein VITISV_041555 [Viti 0.960 0.781 0.645 0.0
15218799 688 putative metal-nicotianamine transporter 0.985 0.806 0.624 0.0
189163712 689 metal transporter protein [Brassica junc 0.985 0.805 0.602 0.0
357168019 707 PREDICTED: probable metal-nicotianamine 0.985 0.785 0.620 0.0
>gi|449461687|ref|XP_004148573.1| PREDICTED: probable metal-nicotianamine transporter YSL7-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/562 (74%), Positives = 492/562 (87%), Gaps = 9/562 (1%)

Query: 1   MLGMSPKIASQADGGNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYP 60
           +LGMS KIA+QA+ GN P NIK LS+GWM+ FLF VSF+GLFSIVPLRK+MI+KYKLTYP
Sbjct: 132 LLGMSAKIAAQAEEGNMPINIKKLSVGWMIGFLFVVSFVGLFSIVPLRKMMIIKYKLTYP 191

Query: 61  SGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFG 120
           SGTATAYLINSFHTPKGA+LAKKQVA+LF+SF FSFV+A FQWF+ A DGCGFSSFPTFG
Sbjct: 192 SGTATAYLINSFHTPKGAKLAKKQVAVLFKSFCFSFVFALFQWFFAAADGCGFSSFPTFG 251

Query: 121 LKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSD 180
           L+A+ ++F+FDFSSTYVGVGMICP+MVN+SLL+GA++SWGIMWP+IE +KG WY A LS 
Sbjct: 252 LQAYAKRFYFDFSSTYVGVGMICPFMVNLSLLLGAIISWGIMWPLIELRKGDWYNASLSA 311

Query: 181 SNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSRRKANSTVSSEVGNESS 240
           S+LHG+ GYRVFIAIAMMLGDG+YHV +M+  T  SL +Q S    A+S++         
Sbjct: 312 SSLHGIQGYRVFIAIAMMLGDGLYHVCFMLFQTFYSLSKQKSGSGNADSSL--------- 362

Query: 241 QIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPI 300
           +I ++D +RR E+FLKDQIPNWVA+ GY++LA ++IIAVP IFHQLKWYH+LVA+  AP+
Sbjct: 363 EITDYDARRRMEYFLKDQIPNWVALLGYVILAAISIIAVPLIFHQLKWYHVLVAYVIAPV 422

Query: 301 LAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLM 360
           LAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGL +GG+IAGLASCGVMMS VSTASDLM
Sbjct: 423 LAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLGNGGVIAGLASCGVMMSIVSTASDLM 482

Query: 361 QDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEGTYPSPYGLLYR 420
           QDFKTGYLTL+SPRSMFFSQV GT +G VLSPLVFWFF+ AY IGDPEG+YP+PYGL+YR
Sbjct: 483 QDFKTGYLTLASPRSMFFSQVAGTAMGCVLSPLVFWFFFKAYNIGDPEGSYPAPYGLMYR 542

Query: 421 GIAILGVEGVSSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMAIP 480
           GIA+LGVEGVSSLPK+CLTLAI FF  AIV+NIIR+VL   + K +IYRFIPSPMCMAIP
Sbjct: 543 GIALLGVEGVSSLPKNCLTLAICFFVGAIVINIIRDVLHKFETKFRIYRFIPSPMCMAIP 602

Query: 481 FYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANLN 540
           FYLG YFAIDMCVGSLILF+W+ K+K  A +FAPAVASGLICG+SLWSVPAAIL+LA + 
Sbjct: 603 FYLGAYFAIDMCVGSLILFIWQRKNKVKAGEFAPAVASGLICGESLWSVPAAILALAGVK 662

Query: 541 APICMKFLSAATNNKVDAFLTG 562
           AP+CMKFLS++TN KVDAFL G
Sbjct: 663 APLCMKFLSSSTNAKVDAFLEG 684

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449508404|ref|XP_004163304.1| PREDICTED: probable metal-nicotianamine transporter YSL7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224081377|ref|XP_002306389.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222855838|gb|EEE93385.1| oligopeptide transporter OPT family [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255582642|ref|XP_002532101.1| oligopeptide transporter, putative [Ricinus communis] gi|223528223|gb|EEF30280.1| oligopeptide transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356576981|ref|XP_003556608.1| PREDICTED: probable metal-nicotianamine transporter YSL7-like [Glycine max] Back     alignment and taxonomy information
>gi|356576983|ref|XP_003556609.1| PREDICTED: probable metal-nicotianamine transporter YSL7-like [Glycine max] Back     alignment and taxonomy information
>gi|147820033|emb|CAN62811.1| hypothetical protein VITISV_041555 [Vitis vinifera] Back     alignment and taxonomy information
>gi|15218799|ref|NP_176750.1| putative metal-nicotianamine transporter YSL7 [Arabidopsis thaliana] gi|75206004|sp|Q9SHY2.1|YSL7_ARATH RecName: Full=Probable metal-nicotianamine transporter YSL7; AltName: Full=Protein YELLOW STRIPE LIKE 7; Short=AtYSL7 gi|6686396|gb|AAF23830.1|AC007234_2 F1E22.10 [Arabidopsis thaliana] gi|27754643|gb|AAO22767.1| unknown protein [Arabidopsis thaliana] gi|29824203|gb|AAP04062.1| unknown protein [Arabidopsis thaliana] gi|41352047|gb|AAS00696.1| metal-nicotianamine transporter YSL7 [Arabidopsis thaliana] gi|332196297|gb|AEE34418.1| putative metal-nicotianamine transporter YSL7 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|189163712|gb|ACD77012.1| metal transporter protein [Brassica juncea] Back     alignment and taxonomy information
>gi|357168019|ref|XP_003581443.1| PREDICTED: probable metal-nicotianamine transporter YSL11-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query563
TAIR|locus:2018491688 YSL7 "AT1G65730" [Arabidopsis 0.985 0.806 0.617 3.3e-198
TAIR|locus:2007715724 YSL8 "AT1G48370" [Arabidopsis 0.987 0.767 0.575 8.2e-186
TAIR|locus:2090502714 YSL5 "AT3G17650" [Arabidopsis 0.987 0.778 0.585 1.7e-185
TAIR|locus:2091970676 YSL6 "AT3G27020" [Arabidopsis 0.934 0.778 0.539 1.6e-159
TAIR|locus:2168656675 YSL3 "YELLOW STRIPE like 3" [A 0.950 0.792 0.523 2.9e-158
TAIR|locus:2152896664 YSL2 "AT5G24380" [Arabidopsis 0.934 0.792 0.512 1.9e-154
TAIR|locus:2163036670 YSL4 "AT5G41000" [Arabidopsis 0.932 0.783 0.525 1.1e-153
TAIR|locus:2134956673 YSL1 "YELLOW STRIPE like 1" [A 0.950 0.794 0.497 1.5e-152
TAIR|locus:2163508216 AT5G45450 "AT5G45450" [Arabido 0.380 0.990 0.544 2.8e-57
DICTYBASE|DDB_G0291554777 DDB_G0291554 "Putative oligope 0.472 0.342 0.245 2.7e-38
TAIR|locus:2018491 YSL7 "AT1G65730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1919 (680.6 bits), Expect = 3.3e-198, P = 3.3e-198
 Identities = 348/564 (61%), Positives = 440/564 (78%)

Query:     1 MLGMSPKIASQADGGNTPANIKSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYP 60
             + GMS  +A Q+   NTP NIK+  +GWM+ FLF VSFLGLFS+VPLRK+MI+ +KLTYP
Sbjct:   133 LFGMSDVVAKQSAEANTPLNIKNPHLGWMIGFLFVVSFLGLFSVVPLRKIMIVDFKLTYP 192

Query:    61 SGTATAYLINSFHTPKGAQLAKKQVAMLFRSFGFSFVWAFFQWFYTAGDGCGFSSFPTFG 120
             SGTATA+LINSFHTP+GA+LAKKQV  L + F FSF+W FFQWF+  GDGCGF++FPTFG
Sbjct:   193 SGTATAHLINSFHTPQGAKLAKKQVRALGKFFSFSFLWGFFQWFFATGDGCGFANFPTFG 252

Query:   121 LKAFKQKFFFDFSSTYVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAELSD 180
             LKA++ KF+FDFS+TYVGVGMICPY++N+SLLIGA+LSWG+MWP+I  +KG WY A+LS 
Sbjct:   253 LKAYENKFYFDFSATYVGVGMICPYLINVSLLIGAILSWGVMWPLIGAQKGKWYAADLSS 312

Query:   181 SNLHGMNGYRVFIAIAMMLGDGIYHVVYMIVTTSLSLVQQYSSRRKANSTVSSEVGNESS 240
             ++LHG+ GYRVFIAIAM+LGDG+Y+ + ++  T   L +Q+  + K    ++      + 
Sbjct:   313 TSLHGLQGYRVFIAIAMILGDGLYNFIKVLGRTVFGLYKQF--KNKDVLPINDHTST-AP 369

Query:   241 QIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFHQLKWYHILVAFSFAPI 300
               +++DD+RRTE FLKD+IP+W AV+GY++LA+V+II VP IFHQLKWYHIL+ +  AP+
Sbjct:   370 VTISYDDKRRTELFLKDRIPSWFAVTGYVVLAIVSIITVPHIFHQLKWYHILIMYIIAPV 429

Query:   301 LAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLM 360
             LAFCNAYGCGLTDWSLAS YGK AI    +W G  +GG++AGLA+CGVMM+ VSTASDLM
Sbjct:   430 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASNGGVLAGLAACGVMMNIVSTASDLM 489

Query:   361 QDFKTGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYP-IGDPEGTYPSPYGLLY 419
             QDFKTGY+TL+SPRSMF SQ  GT +G V+SP VFW FY A+P  G P   YP+PY L+Y
Sbjct:   490 QDFKTGYMTLASPRSMFLSQAIGTAMGCVISPCVFWLFYKAFPDFGQPGTAYPAPYALVY 549

Query:   420 RGIAILGVEGVSSLPKHCLTLXXXXXXXXXVLNIIREVLQHVDAKCKIYRFIPSPMCMAI 479
             R ++ILGVEG S+LPKHCL L         ++N IR+ L       K  RFIP PM MAI
Sbjct:   550 RNMSILGVEGFSALPKHCLMLCYIFFAAAVIVNGIRDALGP-----KWARFIPLPMAMAI 604

Query:   480 PFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAILSLANL 539
             PFYLGGYF IDMC+GSLILF+W   +K  A  ++ AVASGLICG+ +W++P++IL+LA +
Sbjct:   605 PFYLGGYFTIDMCLGSLILFIWRKLNKPKADAYSSAVASGLICGEGIWTLPSSILALAGV 664

Query:   540 NAPICMKFLSAATNNKVDAFLTGS 563
              APICMKFLS A+NNKVDAFL  S
Sbjct:   665 KAPICMKFLSMASNNKVDAFLNPS 688
GO:0006857 "oligopeptide transport" evidence=ISS;RCA
GO:0015198 "oligopeptide transporter activity" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0006865 "amino acid transport" evidence=RCA
TAIR|locus:2007715 YSL8 "AT1G48370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090502 YSL5 "AT3G17650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091970 YSL6 "AT3G27020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168656 YSL3 "YELLOW STRIPE like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152896 YSL2 "AT5G24380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163036 YSL4 "AT5G41000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134956 YSL1 "YELLOW STRIPE like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163508 AT5G45450 "AT5G45450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291554 DDB_G0291554 "Putative oligopeptide transporter YGL114W" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SHY2YSL7_ARATHNo assigned EC number0.62410.98570.8066yesno
Q5JQD7YSL12_ORYSJNo assigned EC number0.62720.97510.7656yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_V000336
oligopeptide transporter OPT family (665 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query563
pfam03169619 pfam03169, OPT, OPT oligopeptide transporter prote 1e-114
TIGR00728606 TIGR00728, OPT_sfam, oligopeptide transporter, OPT 2e-62
COG1297624 COG1297, COG1297, Predicted membrane protein [Func 9e-21
TIGR00733591 TIGR00733, TIGR00733, putative oligopeptide transp 2e-14
>gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein Back     alignment and domain information 
 Score =  352 bits (904), Expect = e-114
 Identities = 154/538 (28%), Positives = 239/538 (44%), Gaps = 45/538 (8%)

Query: 22  KSLSIGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLA 81
           +S S G+ +  L +   LG+    PLR+ ++   KL +PSG ATA L+ + HTP G + A
Sbjct: 101 QSFSFGYAILLLLSTQLLGVGFAGPLRRFLVYPPKLPFPSGLATAELLKALHTPGGWKEA 160

Query: 82  KKQVAMLFRSFGFSFVWAFF--QWFYTAGDG----CGFSSFPTFGLKAFKQKFFFDFSST 135
           K ++      F  SFV+ +F    F              S PTFGL      F FD+S+ 
Sbjct: 161 KSRLKFFLIGFVASFVYYWFPFYIFPALSSFSWVCWIAPSNPTFGLLFGGLGFTFDWSAI 220

Query: 136 YVGVGMICPYMVNISLLIGAVLSWGIMWPIIETKKGIWYKAEL---------SDSNLHGM 186
            +G G+I P  V +++LIGAVLSWGI+ P++     +WY A L         +     G+
Sbjct: 221 LLGSGLIVPLWVAVNMLIGAVLSWGIIIPLLYYSGNVWYTAYLPIMSNGLFDNTGTSDGL 280

Query: 187 NGYRVFIAIAMMLGDGIYHVV-YMIVTTSLSLVQQYSSRRKANSTVSSEVGNESSQIVNF 245
             Y  +I    ML  G+Y ++ +  +T ++     +  R    +  +S    +S     +
Sbjct: 281 LDYARYIGYGPMLLSGLYALLFFAAITATIVHSILFHGRDIWQALKASRGPKKS-----Y 335

Query: 246 DDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFH-QLKWYHILVAFSFAPILAFC 304
           DD  R       ++P W  ++G +L  V+ I  V  +F  QL  + +L+A   A + A  
Sbjct: 336 DDPHRRLMRKYKEVPMWWYLAGLVLSLVLGIALVAALFPTQLPVWGLLLALLLAFVFAIP 395

Query: 305 NAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFK 364
           +AY  GLT  S  S  G    +I    +    G  +A L   GV  +  + A D MQD K
Sbjct: 396 SAYIAGLTGSSPVSGLGILTELIAGYVLP---GRPLANLIFGGVGYNAAAQAGDFMQDLK 452

Query: 365 TGYLTLSSPRSMFFSQVFGTFLGVVLSPLVFWFFYNAYPIGDPEG---TYPSPYGLLYRG 421
           TG+ T + PR+ F +Q+ GT +G V++P V      AY     +G   T P+P       
Sbjct: 453 TGHYTGAPPRAQFVAQLIGTLVGSVVNPGVLNLLNQAYGCTGAQGDSWTCPAPQAFFSAA 512

Query: 422 IAILGVEGV-SSLPKHCLTLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMA-- 478
           +A   + G    LP + L       A A VL+ +              + +P  +  A  
Sbjct: 513 VAWGVIGGKRFGLPYYALLWGFLVGAVAPVLDWLLH------------KRLPRSLAFAGA 560

Query: 479 --IPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAPAVASGLICGDSLWSVPAAIL 534
             I  YL       + VG L  +    + K     +   +A+GLI G++L  V  A L
Sbjct: 561 GTIGPYLPPSLTSAILVGGLFNYYVRRRRKAWWRKYNYVLAAGLIAGEALMGVIIAFL 618

The OPT family of oligopeptide transporters is distinct from the ABC pfam00005 and PTR pfam00854 transporter families. OPT transporters were first recognised in fungi (Candida albicans and Schizosaccharomyces pombe), but this alignment also includes orthologues from Arabidopsis thaliana. OPT transporters are thought to have 12-14 transmembrane domains and contain the following motif: SPYxEVRxxVxxxDDP. Length = 619
>gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily Back     alignment and domain information
>gnl|CDD|224216 COG1297, COG1297, Predicted membrane protein [Function unknown] Back     alignment and domain information
>gnl|CDD|129816 TIGR00733, TIGR00733, putative oligopeptide transporter, OPT family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 563
KOG2262761 consensus Sexual differentiation process protein I 100.0
TIGR00727681 ISP4_OPT small oligopeptide transporter, OPT famil 100.0
PF03169624 OPT: OPT oligopeptide transporter protein; InterPr 100.0
TIGR00728654 OPT_sfam oligopeptide transporters, OPT superfamil 100.0
TIGR00733591 putative oligopeptide transporter, OPT family. Thi 100.0
COG1297624 Predicted membrane protein [Function unknown] 100.0
TIGR00733 591 putative oligopeptide transporter, OPT family. Thi 93.39
PF03169 624 OPT: OPT oligopeptide transporter protein; InterPr 84.52
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=8.5e-102  Score=816.39  Aligned_cols=499  Identities=18%  Similarity=0.239  Sum_probs=448.7

Q ss_pred             ceeccC--hhHHHHHHHHHHHHhHHHHHhhccceeecCCCCCCchHHHHHHHHhhcCCCCchhh-hHHHHHHHHHHHHHH
Q 036864           20 NIKSLS--IGWMMAFLFAVSFLGLFSIVPLRKVMILKYKLTYPSGTATAYLINSFHTPKGAQLA-KKQVAMLFRSFGFSF   96 (563)
Q Consensus        20 ~~~~~~--~~~~~~~~~~~~llG~~~A~~lRr~lV~~~~l~fP~~la~a~li~alH~~~~~~~a-~~~~~~f~~~f~~~f   96 (563)
                      .||+.+  +++.+++.+++|++|||+||++||++|+|.+|.||+++.+++|+|+||++|+++++ .+|+|||.++|.++|
T Consensus       172 ~fY~~~l~f~~~~ll~lttQ~lGyGwAGl~Rk~lV~Pa~m~WPsnLvqvsLFraLHeke~~~~g~msR~rFF~ivfv~SF  251 (761)
T KOG2262|consen  172 AFYKRNLSFGYAFLLVLTTQLLGYGWAGLFRKYLVYPASMWWPSNLVQVSLFRALHEKENKSKGNMSRYRFFLIVFVASF  251 (761)
T ss_pred             HHHhccccHHHHHHHHHHHHHhcccHhhhhHhhccCcHhhcCcchhHHHHHHHHHHhhhhhcccCccchhhhhHHHHHHH
Confidence            366664  56778889999999999999999999999999999999999999999997655444 899999999999999


Q ss_pred             HHHHH-HHHHhccc----cccccccc-----------cccccccCCcceecccc--cccccccccchHHHHHHHHHHHHH
Q 036864           97 VWAFF-QWFYTAGD----GCGFSSFP-----------TFGLKAFKQKFFFDFSS--TYVGVGMICPYMVNISLLIGAVLS  158 (563)
Q Consensus        97 ~~~~~-~~i~~~l~----~~~~~~~~-----------~~G~~~~~~~~~~dws~--~~~G~g~i~p~~~~~~~~~G~vl~  158 (563)
                      +|+|| +|+||.++    +||+.+.+           ++|+.    ++++||++  +++|+|+.+|+++.+|.++|.++.
T Consensus       252 iyY~fPgylF~~Ls~~swvcW~~P~s~~~~qi~sg~~GLGi~----~~tlDW~~IssylgSPLasP~~a~~n~~~gfvl~  327 (761)
T KOG2262|consen  252 IYYWFPGYLFPILSSFSWVCWIWPSSITANQIGSGLTGLGIG----PFTLDWSQISSYLGSPLASPFFAIANVFLGFVLF  327 (761)
T ss_pred             HHHHhhHHHHHHHhhhheeeEeccccHHHHHhcccccccccc----cccccHHHHHHHcCCcchhhHHHHHHHhhhhhhh
Confidence            99999 79999873    79998742           45555    78999998  489999999999999999999999


Q ss_pred             HHHHHHHhhhhcCcccCCCCCC--CCccccc-------------------hhH----HHHHHHHHHHHH--HHHHHHHHH
Q 036864          159 WGIMWPIIETKKGIWYKAELSD--SNLHGMN-------------------GYR----VFIAIAMMLGDG--IYHVVYMIV  211 (563)
Q Consensus       159 ~~ii~P~~~~~~n~w~~~~~p~--~~~~~~~-------------------~y~----~~~~~~~~~~~g--~~~l~~~~~  211 (563)
                      .+|+.|++|+ +|.|...++|+  |+.+|.+                   .|+    +|+++...+++|  +..+++.+.
T Consensus       328 ~~IV~Pi~Y~-~n~~~a~~fPI~Ss~lf~~tG~sYnvt~Il~~~f~ld~~~Y~~ysp~yls~~falsygl~faa~~a~i~  406 (761)
T KOG2262|consen  328 IYIVLPILYW-TNTYDAKYFPIFSSSLFDHTGNSYNVTKILDSKFELDLDKYQEYSPLYLSTFFALSYGLGFAALSATIV  406 (761)
T ss_pred             hhhhhhhHhh-ccceecceeceecCcceecCCcEeceeeeecCccccchHHHhhcCCcceeHHHHHHHHHHHHHHHHHhh
Confidence            9999999975 79999999996  3344332                   354    799999999988  778888888


Q ss_pred             HHHH----HHHHHHhhccccccccccccCCCCccccccccchhccccccCCchhHHHHHHHHHHHHHHHHHhccccc--c
Q 036864          212 TTSL----SLVQQYSSRRKANSTVSSEVGNESSQIVNFDDQRRTEFFLKDQIPNWVAVSGYILLAVVAIIAVPFIFH--Q  285 (563)
Q Consensus       212 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~m~~y~~vP~ww~~~~l~v~~~l~i~~~~~~~~--~  285 (563)
                      |.+.    +++++.+...                 +..+|+|.|+|++|||||+|||++.+++++++++++++++.+  |
T Consensus       407 Hv~Lf~gkdiw~~~~~~~-----------------~k~~DiHtrlMkkYKeVP~WWf~~ili~s~~l~~~~~~~~~~~~q  469 (761)
T KOG2262|consen  407 HVALFNGKDIWQQTKKAF-----------------NKKMDIHTRLMKKYKEVPDWWFLAILIVSLGLGLAACEGYKTQVQ  469 (761)
T ss_pred             hheeeccHHHHHHHHhcc-----------------ccCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHhhheeeeccccc
Confidence            7643    3444433221                 345799999999999999999999999999999999999988  8


Q ss_pred             chHHHHHHHHHHHHHHHHHhhhhhhccCCccccchhHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 036864          286 LKWYHILVAFSFAPILAFCNAYGCGLTDWSLASNYGKFAIIIFSSWVGLEHGGIIAGLASCGVMMSTVSTASDLMQDFKT  365 (563)
Q Consensus       286 lp~~~~~vai~l~~i~~~~~~~~~g~Tg~~p~~~~~~i~qli~g~~~~~~pg~~~anl~~~~~~~~~~~qa~~~~~DlK~  365 (563)
                      +|||++++|+++++++.+|.+.+.|+||++|++|  +++|+|.||+.   ||+|+|||.||.|++.+..||..++||+|+
T Consensus       470 ~PwWg~~va~~ia~vf~iPigii~AtTNq~~GLN--iitE~i~Gy~~---PgrPiAn~~FK~yGyism~Qal~f~~DlKl  544 (761)
T KOG2262|consen  470 LPWWGLLVACAIAFVFTIPIGIIQATTNQTPGLN--IITEYIIGYIY---PGRPIANLCFKTYGYISMTQALTFLQDLKL  544 (761)
T ss_pred             CchHHHHHHHHHHHHHhccHHHhhhhccCCccHH--HHHHHHHHhhc---CCchHHHHHHHHhchhhHHHHHHHHhhccc
Confidence            9999999999999999999999999999999998  99999999999   999999999999999999999999999999


Q ss_pred             hhhcCCChhhHHHHHHHHHHHHHhhHHHHH-HHHHccCCCCC--CCCCCCCCchhHHHHHHHH-hccCCCCCchh---hH
Q 036864          366 GYLTLSSPRSMFFSQVFGTFLGVVLSPLVF-WFFYNAYPIGD--PEGTYPSPYGLLYRGIAIL-GVEGVSSLPKH---CL  438 (563)
Q Consensus       366 G~y~~~pPr~~f~~QiiG~ivga~v~~~v~-~ll~~~~~i~~--~~~~~~~P~a~~~~s~a~~-g~~G~~~l~~~---~~  438 (563)
                      |||||+|||.||.+|++||+++++|+.+|. |++.+..++||  ++++||||..++++++|++ |++||+|+|++   |.
T Consensus       545 ghYMKIPPR~mF~~Q~v~tivs~~Vn~gv~~W~m~~I~~iC~~~~~s~~TCP~~rvffnASvIWGlIGP~riF~~~g~Y~  624 (761)
T KOG2262|consen  545 GHYMKIPPRSMFAVQLVGTIVAGFVNLGVAWWLMYSIPNICTTDQNSPWTCPSDRVFFNASVIWGLIGPKRIFGSLGIYP  624 (761)
T ss_pred             eeeecCChHHHHHHHHHHHHhheeeeHHhHHHHHhcccccccCCCCCCccCCCCceEEeceeeeecccchhhcCCCCccC
Confidence            999999999999999999999999999998 67778899997  4578999999999999999 99999999985   44


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhcc----cccchhhhhHHHHHHHHHHHHHHHhcCcccchhhhH
Q 036864          439 TLAIAFFAAAIVLNIIREVLQHVDAKCKIYRFIPSPMCMA----IPFYLGGYFAIDMCVGSLILFVWEMKDKRSAADFAP  514 (563)
Q Consensus       439 ~~~~~~~~iG~~l~i~~~l~~~~~p~~~~~~~i~~p~~~~----l~~~~~~~~~~~~~iG~~~~~~~~r~~~~~~~~y~~  514 (563)
                      . +.|+|++|++.|++.|+++|++||.+|.+++|.|+.++    +|++++.+|++|+.+|.++++++|||++.||+||||
T Consensus       625 ~-l~wFFLiGa~~pv~vw~~~k~fPk~~w~~~i~~pvl~gg~~~mPpat~vny~sw~iv~fifny~i~r~~~~WW~kYNy  703 (761)
T KOG2262|consen  625 G-LNWFFLIGALAPVLVWLLQKKFPKKKWIKQINPPVLFGGTANMPPATAVNYTSWAIVGFIFNYYIFRYRRSWWQKYNY  703 (761)
T ss_pred             c-chHHHHHHHHhhHHHHHHHHhcchhhhhhccCcceEecccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4 56999999999999999999999999999999999987    677778899999999999999999999999999999


Q ss_pred             HHHHhHHhhhHhHHHHHH-HHHhCCCCCCceeee
Q 036864          515 AVASGLICGDSLWSVPAA-ILSLANLNAPICMKF  547 (563)
Q Consensus       515 ~laaGL~aG~al~gviia-~l~~~g~~~~~~~~~  547 (563)
                      ++|||||+|.+++|++++ +++..|++.+ ||+=
T Consensus       704 vLsaaldaG~a~~~vliffcv~~~~~~~~-WWGn  736 (761)
T KOG2262|consen  704 VLSAALDAGVAFMGVLIFFCVQYPGISLN-WWGN  736 (761)
T ss_pred             HhhhhcccchhHHHhHhhheeccCCCccc-cccC
Confidence            999999999999999999 8999999988 8863

>TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information
>TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily Back     alignment and domain information
>TIGR00733 putative oligopeptide transporter, OPT family Back     alignment and domain information
>COG1297 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00733 putative oligopeptide transporter, OPT family Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00