Citrus Sinensis ID: 036866


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
MALLQSLVLLLFLYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFPLDSKNTLADTSIKVVVFP
cHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEccccEEEEccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccEEEEEEEccccccHHHHHHHHHHHHHHcccccccccEEEEEcccEEEEEEccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHcccccHcccccccccccccHHHHHHHHHHHHccccccccccEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccHHccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccEcccccccccccEEEEEEEccccccHHHHHHHHHHHHHHcHHHcccccccEEEccccEEEEEEEccccccccccccccccccccccc
MALLQSLVLLLFLYICaadplgefcnkdsnvsgngmiSANIDNLLAELVAETAKTGYiatsygkdqdkvfglaqcrgdvdskdcaSCIQDAAKQIRQRCVNQADARIWYDYCFLRYntenfvgkvdtSFGIFYYnvenvtdpksfNKELGALMDEIRSqavvpkneglgkgettlsPFVTLYALVQCTRDLSQIDCAQCLAIAVgnfpnfcnnkkgcrVLYSSCYvryelypfffpldskntladtsikvvvfp
MALLQSLVLLLFLYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIAtsygkdqdkVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFpldskntladtsikvvvfp
MAllqslvlllflYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFPLDSKNTLADTSIKVVVFP
**LLQSLVLLLFLYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVV****GLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFPLDSKNTLADTSIKVVV**
MALLQSLVLLLFLYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFF********************
MALLQSLVLLLFLYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFPLDSKNTLADTSIKVVVFP
MALLQSLVLLLFLYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFPL*****************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALLQSLVLLLFLYICAADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFPLDSKNTLADTSIKVVVFP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query254 2.2.26 [Sep-21-2011]
Q9LV60263 Cysteine-rich repeat secr yes no 0.952 0.920 0.594 5e-84
Q9LRJ9252 Cysteine-rich repeat secr no no 0.842 0.849 0.408 1e-44
Q9M0X5 675 Cysteine-rich receptor-li no no 0.905 0.340 0.330 2e-32
Q9M2I5258 Putative cysteine-rich re no no 0.767 0.755 0.343 5e-30
Q9T0J1 665 Cysteine-rich receptor-li no no 0.854 0.326 0.333 2e-28
Q9LRL7279 Putative cysteine-rich re no no 0.759 0.691 0.352 3e-28
Q9LRL8256 Putative cysteine-rich re no no 0.767 0.761 0.351 4e-28
Q8GYA4 669 Cysteine-rich receptor-li no no 0.834 0.316 0.321 5e-28
Q9SIP6255 Putative cysteine-rich re no no 0.708 0.705 0.372 2e-27
Q9LRL0255 Putative cysteine-rich re no no 0.696 0.694 0.376 5e-27
>sp|Q9LV60|CRR55_ARATH Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana GN=CRRSP55 PE=2 SV=1 Back     alignment and function desciption
 Score =  310 bits (795), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 148/249 (59%), Positives = 190/249 (76%), Gaps = 7/249 (2%)

Query: 1   MALLQSLVLLLFLYIC---AADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGY 57
           M  L     LL   +C   AAD + + CN +SN+S +  +S NID+LLA LV++T   G+
Sbjct: 1   MKTLVVKCFLLLALVCSCRAADSIWQLCNTNSNISASSQVSKNIDSLLATLVSKTPSKGF 60

Query: 58  IATSYGK--DQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLR 115
             T+     +++KV+GLAQCRGD+ + DC++CIQDAAK+IR+ C NQ+D+RI YD+CFLR
Sbjct: 61  KTTTSSSYNNKEKVYGLAQCRGDISNTDCSTCIQDAAKKIREVCQNQSDSRILYDFCFLR 120

Query: 116 YNTENFVGKVDTSFGIFYYNVENVT--DPKSFNKELGALMDEIRSQAVVPKNEGLGKGET 173
           Y+ ENF+GK+DT  G+ Y+NV NVT  DPK F+ ELGAL D+IRS+AV+PKN+GLGKG+T
Sbjct: 121 YSQENFIGKLDTGAGLIYFNVANVTEIDPKKFDNELGALFDKIRSEAVLPKNKGLGKGKT 180

Query: 174 TLSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPF 233
            L+PFVTL  LVQCTRDLS++DCAQC A AVG+F   C+NKKGCRVLYSSCYVRYE YPF
Sbjct: 181 KLTPFVTLNGLVQCTRDLSELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEFYPF 240

Query: 234 FFPLDSKNT 242
           +FPLD   T
Sbjct: 241 YFPLDPAKT 249





Arabidopsis thaliana (taxid: 3702)
>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1 Back     alignment and function description
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2I5|CRR61_ARATH Putative cysteine-rich repeat secretory protein 61 OS=Arabidopsis thaliana GN=CRRSP61 PE=3 SV=1 Back     alignment and function description
>sp|Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRL7|CRR22_ARATH Putative cysteine-rich repeat secretory protein 22 OS=Arabidopsis thaliana GN=CRRSP22 PE=5 SV=2 Back     alignment and function description
>sp|Q9LRL8|CRR21_ARATH Putative cysteine-rich repeat secretory protein 21 OS=Arabidopsis thaliana GN=CRRSP21 PE=5 SV=2 Back     alignment and function description
>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3 Back     alignment and function description
>sp|Q9SIP6|CRR10_ARATH Putative cysteine-rich repeat secretory protein 10 OS=Arabidopsis thaliana GN=CRRSP10 PE=3 SV=1 Back     alignment and function description
>sp|Q9LRL0|CRR27_ARATH Putative cysteine-rich repeat secretory protein 27 OS=Arabidopsis thaliana GN=CRRSP27 PE=5 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
388491254261 unknown [Lotus japonicus] 1.0 0.973 0.669 1e-102
356566120257 PREDICTED: cysteine-rich repeat secretor 0.996 0.984 0.679 1e-102
357504959257 Cysteine-rich repeat secretory protein [ 1.0 0.988 0.665 1e-99
255584667281 DUF26 domain-containing protein 1 precur 0.866 0.782 0.736 4e-94
359494772262 PREDICTED: cysteine-rich repeat secretor 0.929 0.900 0.672 5e-94
147772330 399 hypothetical protein VITISV_020515 [Viti 0.925 0.588 0.669 5e-94
255571707260 DUF26 domain-containing protein 2 precur 0.960 0.938 0.638 8e-92
15239000263 cysteine-rich repeat secretory protein 5 0.952 0.920 0.594 3e-82
297795529263 hypothetical protein ARALYDRAFT_494916 [ 0.929 0.897 0.607 6e-82
359494778255 PREDICTED: cysteine-rich repeat secretor 0.901 0.898 0.634 2e-80
>gi|388491254|gb|AFK33693.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/260 (66%), Positives = 212/260 (81%), Gaps = 6/260 (2%)

Query: 1   MALLQSLVLLLFLYICAAD------PLGEFCNKDSNVSGNGMISANIDNLLAELVAETAK 54
           M LL  ++  L L I  A+      PLGEFCN+++ +S  G +SANID LLAE + +T  
Sbjct: 1   MHLLYKIIFSLLLCISIAESQDLSGPLGEFCNENTKISSGGKLSANIDKLLAEFILKTPS 60

Query: 55  TGYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFL 114
           TG++ATSYG +QD+V+GLAQCRGDV ++DC++CIQDAAKQIRQ+C NQ DARIWYDYCFL
Sbjct: 61  TGFVATSYGNNQDQVYGLAQCRGDVSTQDCSNCIQDAAKQIRQKCPNQVDARIWYDYCFL 120

Query: 115 RYNTENFVGKVDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVPKNEGLGKGETT 174
           RYN ++F+G VDTSFGIFY+NV+NVTDP+ FNKELG+LM +IR QAV PK +GLGKG+T 
Sbjct: 121 RYNNKSFIGDVDTSFGIFYFNVKNVTDPEGFNKELGSLMGKIRGQAVKPKAQGLGKGKTN 180

Query: 175 LSPFVTLYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFF 234
           LSPF+TLYALVQCTRDLS+I CAQCLA+AV NFP FC+N+KGCRVLYSSCYVRYELYPFF
Sbjct: 181 LSPFLTLYALVQCTRDLSEISCAQCLAVAVSNFPTFCDNRKGCRVLYSSCYVRYELYPFF 240

Query: 235 FPLDSKNTLADTSIKVVVFP 254
           FPLDS  T      + +V+P
Sbjct: 241 FPLDSSKTGDSNVARAIVYP 260




Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566120|ref|XP_003551283.1| PREDICTED: cysteine-rich repeat secretory protein 55-like [Glycine max] Back     alignment and taxonomy information
>gi|357504959|ref|XP_003622768.1| Cysteine-rich repeat secretory protein [Medicago truncatula] gi|355497783|gb|AES78986.1| Cysteine-rich repeat secretory protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255584667|ref|XP_002533056.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis] gi|223527154|gb|EEF29326.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359494772|ref|XP_002264674.2| PREDICTED: cysteine-rich repeat secretory protein 55-like [Vitis vinifera] gi|296080916|emb|CBI18746.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147772330|emb|CAN64566.1| hypothetical protein VITISV_020515 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255571707|ref|XP_002526797.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223533873|gb|EEF35603.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15239000|ref|NP_199665.1| cysteine-rich repeat secretory protein 55 [Arabidopsis thaliana] gi|75180590|sp|Q9LV60.1|CRR55_ARATH RecName: Full=Cysteine-rich repeat secretory protein 55; Flags: Precursor gi|8777384|dbj|BAA96974.1| 33 kDa secretory protein-like [Arabidopsis thaliana] gi|15292981|gb|AAK93601.1| putative 33 kDa secretory protein [Arabidopsis thaliana] gi|20259257|gb|AAM14364.1| putative 33 kDa secretory protein [Arabidopsis thaliana] gi|332008300|gb|AED95683.1| cysteine-rich repeat secretory protein 55 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297795529|ref|XP_002865649.1| hypothetical protein ARALYDRAFT_494916 [Arabidopsis lyrata subsp. lyrata] gi|297311484|gb|EFH41908.1| hypothetical protein ARALYDRAFT_494916 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359494778|ref|XP_002269937.2| PREDICTED: cysteine-rich repeat secretory protein 55 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
TAIR|locus:2166091263 AT5G48540 "AT5G48540" [Arabido 0.885 0.855 0.627 1.1e-78
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.807 0.813 0.410 2.8e-43
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.850 0.32 0.333 3.6e-31
TAIR|locus:2085470258 AT3G58310 "AT3G58310" [Arabido 0.755 0.744 0.355 6.2e-30
TAIR|locus:2141762 665 CRK26 "cysteine-rich RLK (RECE 0.854 0.326 0.333 4e-29
TAIR|locus:2121676 669 CRK10 "cysteine-rich RLK (RECE 0.850 0.322 0.314 5.2e-29
TAIR|locus:2065878255 AT2G31620 "AT2G31620" [Arabido 0.704 0.701 0.380 1.9e-28
TAIR|locus:2095642256 AT3G21990 "AT3G21990" [Arabido 0.814 0.808 0.337 8.2e-28
TAIR|locus:2127323 642 CRK27 "cysteine-rich RLK (RECE 0.795 0.314 0.370 6.9e-27
TAIR|locus:2830202260 AT3G21945 "AT3G21945" [Arabido 0.818 0.8 0.321 4e-26
TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 145/231 (62%), Positives = 185/231 (80%)

Query:    17 AADPLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKTGYIAT---SYGKDQDKVFGLA 73
             AAD + + CN +SN+S +  +S NID+LLA LV++T   G+  T   SY  +++KV+GLA
Sbjct:    20 AADSIWQLCNTNSNISASSQVSKNIDSLLATLVSKTPSKGFKTTTSSSYN-NKEKVYGLA 78

Query:    74 QCRGDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENFVGKVDTSFGIFY 133
             QCRGD+ + DC++CIQDAAK+IR+ C NQ+D+RI YD+CFLRY+ ENF+GK+DT  G+ Y
Sbjct:    79 QCRGDISNTDCSTCIQDAAKKIREVCQNQSDSRILYDFCFLRYSQENFIGKLDTGAGLIY 138

Query:   134 YNVENVT--DPKSFNKELGALMDEIRSQAVVPKNEGLGKGETTLSPFVTLYALVQCTRDL 191
             +NV NVT  DPK F+ ELGAL D+IRS+AV+PKN+GLGKG+T L+PFVTL  LVQCTRDL
Sbjct:   139 FNVANVTEIDPKKFDNELGALFDKIRSEAVLPKNKGLGKGKTKLTPFVTLNGLVQCTRDL 198

Query:   192 SQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPFFFPLDSKNT 242
             S++DCAQC A AVG+F   C+NKKGCRVLYSSCYVRYE YPF+FPLD   T
Sbjct:   199 SELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEFYPFYFPLDPAKT 249




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0080167 "response to karrikin" evidence=IEP
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065878 AT2G31620 "AT2G31620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127323 CRK27 "cysteine-rich RLK (RECEPTOR-like protein kinase) 27" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2830202 AT3G21945 "AT3G21945" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LV60CRR55_ARATHNo assigned EC number0.59430.95270.9201yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00013657001
SubName- Full=Chromosome undetermined scaffold_522, whole genome shotgun sequence; (262 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 2e-26
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 1e-24
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score = 98.3 bits (245), Expect = 2e-26
 Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 6/105 (5%)

Query: 23  EFCNKDSN---VSGNGMISANIDNLLAELVAETAKT---GYIATSYGKDQDKVFGLAQCR 76
             C+ +++    + N    +N++ LL+ L +  A +   G+ A + G   D V+GLAQCR
Sbjct: 2   HLCSSNTSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCR 61

Query: 77  GDVDSKDCASCIQDAAKQIRQRCVNQADARIWYDYCFLRYNTENF 121
           GD+ + DC SC+  A  ++R+ C N+   RIWYD CFLRY +  F
Sbjct: 62  GDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 254
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.93
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.92
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.93  E-value=7.4e-26  Score=173.66  Aligned_cols=100  Identities=40%  Similarity=0.869  Sum_probs=76.7

Q ss_pred             CCCCC-C-CCcc-CCCchHHHHHHHHHHHHHHhhhhc---CcceeecCCCCCeEEEEEEcCCCCCccchHHHHHHHHHHH
Q 036866           22 GEFCN-K-DSNV-SGNGMISANIDNLLAELVAETAKT---GYIATSYGKDQDKVFGLAQCRGDVDSKDCASCIQDAAKQI   95 (254)
Q Consensus        22 ~~~C~-~-~~~~-~~~s~f~~nl~~ll~~L~~~a~~~---~f~~~~~g~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~i   95 (254)
                      |+.|+ + ++++ +.+++|+++|+.||..|..+++.+   +|++++.|.++++||||+||++|+++++|+.||+.++..+
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~   80 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI   80 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence            67898 3 3334 566679999999999999998753   8999988888899999999999999999999999999999


Q ss_pred             HhhCccCcceEEEcceeEEEecccee
Q 036866           96 RQRCVNQADARIWYDYCFLRYNTENF  121 (254)
Q Consensus        96 ~~~C~~~~ga~i~~~~C~lRYs~~~F  121 (254)
                      ++.|++++||+||+++|+||||+++|
T Consensus        81 ~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   81 SSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999988



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
3a2e_A108 Crystal Structure Of Ginkbilobin-2, The Novel Antif 2e-06
>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108 Back     alignment and structure

Iteration: 1

Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 9/113 (7%) Query: 125 VDTSFGIFYYNVENVTDPKSFNKELGALMDEIRSQAVVP----KNEGLGKGETTLSPFVT 180 +T+F N + + FN+ L A++ ++R K G G T Sbjct: 1 ANTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAP-----T 55 Query: 181 LYALVQCTRDLSQIDCAQCLAIAVGNFPNFCNNKKGCRVLYSSCYVRYELYPF 233 Y C + +SQ DC CL+ V + CNN G RV C+++YE F Sbjct: 56 AYGRATCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 1e-25
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 2e-24

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query254
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.95
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.94
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.94
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.93
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.95  E-value=1.1e-27  Score=183.53  Aligned_cols=101  Identities=25%  Similarity=0.558  Sum_probs=90.4

Q ss_pred             CCCCCCCCCCccCCCchHHHHHHHHHHHHHHhhhhc--CcceeecC-CCCCeEEEEEEcCCCCCccchHHHHHHHHHHHH
Q 036866           20 PLGEFCNKDSNVSGNGMISANIDNLLAELVAETAKT--GYIATSYG-KDQDKVFGLAQCRGDVDSKDCASCIQDAAKQIR   96 (254)
Q Consensus        20 p~~~~C~~~~~~~~~s~f~~nl~~ll~~L~~~a~~~--~f~~~~~g-~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~i~   96 (254)
                      .+++.|++. +++++++|++||+.||..|+++++.+  +|++...+ .++++||||+|||||+++++|+.||+.|+.+++
T Consensus         5 ~v~~~Cn~~-~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~   83 (108)
T 3a2e_A            5 FVSSACNTQ-KIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIF   83 (108)
T ss_dssp             EEEEEECSS-BCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHH
T ss_pred             eeeeecCCC-ccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            467789765 56778899999999999999998765  56666655 456899999999999999999999999999999


Q ss_pred             hhCccCcceEEEcceeEEEecccee
Q 036866           97 QRCVNQADARIWYDYCFLRYNTENF  121 (254)
Q Consensus        97 ~~C~~~~ga~i~~~~C~lRYs~~~F  121 (254)
                      ++||+++||+||+++|+||||+++|
T Consensus        84 ~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           84 SICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999987



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00