Citrus Sinensis ID: 036898

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
Protein Sequence
FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKKVYKKEKDPPMNHRDDTIESMNHNSENNGTESTNPTRYNCIMYPEGQSSAGNVNAYSENMQQTFHNSTSLEIPHQMDSTNHGVVNCTQYGNPNPNPNANQFASPNPYPNPGQNIKDFSCNYSGVANSIQYANTSQNDINASSIAFESMPTQAQVFADNVNLPEWSSLITAVVDPEIQKLDSYFGISTASKEPLSPLPPLPSNDPLWWPTITDFEDDSWCSIYQENYNAPNGR
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHccccccccccEEEEccccccccHHHHHHHcccccccccEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccccccccccEEEEccccccccccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHccccccccEEEEEEcccccccccccHcccccccccccEEEEEccccccccccccccccccccccccccEEEEccccccccccccEEEEEEEEEEEcccccccccccccccccccEEEEEEEccccccHcccccccccccEEEEEEEEccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccHccEEEEEcccccccccc
Coil and Loop (DISEMBL)
FCPLDWELLVCYLKKkvkneplppnrimeiklynftpeQLKQELKVKYKDLREKemffftprerkhqngtrlnrvtgsgpdsgsgywkstgadksikFKGALVGFKKQLVYYrknpeaggegekndwiktDWIMhefrvpnnptprkkdgtnmELDWALCKIYKKVYkkekdppmnhrddtiesmnhnsenngtestnptryncimypegqssagnvnaYSENmqqtfhnstsleiphqmdstnhgvvnctqygnpnpnpnanqfaspnpypnpgqnikdfscnysgvANSIQYANtsqndinassiafesmptqaqvfadnvnlpewsslitavvdpeiqkldsyfgistaskeplsplpplpsndplwwptitdfeddswcsiyqenynapngr
Flexible Loop (DISEMBL)
FCPLDWELLVCYLkkkvkneplppnrimeiklynftpeqlKQELKVKYKDLREKEMffftprerkhqngtrlnrvtgsgpdsgsgyWKSTGADKSIKFKGALVGFKKQLVYYRknpeaggegekndwIKTDWIMHEFrvpnnptprkkdgtnmeLDWALCKIYKKVykkekdppmnhrddtiesmnhnsenngtestnptRYNCIMYPEGQSSAGNVNAYSENMQQTFHNSTSLEIPHQMDSTNHGVVNCTQYGNPNPNPNANQFASPNPYPNPGQNIKDFSCNYSGVANSIQYANTSQNDINASSIAFESMPTQAQVFADNVNLPEWSSLITAVVDPEIQKLDSYFGISTASKEPLSPLPPLPSNDPLWWPTITDFEDDSWCSIYQENYNAPNGR
Low Complexity Region (SEG)
FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCkiykkvykkekDPPMNHRDDTIESMNHNSENNGTESTNPTRYNCIMYPEGQSSAGNVNAYSENMQQTFHNSTSLEIPHQMDSTNHGVVNCTQYGnpnpnpnanqfaspnpYPNPGQNIKDFSCNYSGVANSIQYANTSQNDINASSIAFESMPTQAQVFADNVNLPEWSSLITAVVDPEIQKLDSYFGISTASKEplsplpplpsndplwwpTITDFEDDSWCSIYQENYNAPNGR
Disordered region (IsUnstruct)
*CPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT*************************YWKSTGADKSIKFKGALVGFKKQLVYYRKNP******EKNDWIKTDWIMHEFRV************NMELDWALCKIYKKVY************************************CIM*************************************************************************DFSCNYSGVANSIQYANT****INASSIAFESMPTQAQVFADNVNLPEWSSLITAVVDPEIQKLDSYFGIS*****************PLWWPTITDFEDDSWCSIYQEN*******
Disordered Region (DISOPRED)
FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVP***************DWALCKIYK**************************************************************************************************************************************************************VNLPEWSSLITA*******************************NDPLWWPTITDFEDDSWCSIYQENY******
Disordered Region (DISEMBL)
FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKKVYKKEKDPPMNHRDDTIESMNHN********TNPTRYNCIMYPEGQSSAGNVNAYSENMQQTFHNSTSLEIPHQMDSTNHGVVNCTQYGNPNPNPNANQFASPNPYPNPGQNIKDFSCNYSGVANSIQYANTSQNDINASSIAFESMPTQAQVFADNVNLPEWSSLITAVVDPEIQKLDSYFGISTASKEPLSPLPPLPSNDPLWWPTITDFEDDSWCSIYQENYNAPNGR
Disordered Region (DISPRO)
FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTG**PDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEA****EKNDWIKTDWIMHEFRVPNNPT******TNMELDWALCKIYKKVY*****************************************************S***Q***HNSTSLEIPHQMDSTNHGVVNCTQYGNPNPNPNANQFASPNPYPNPGQNIKDFSCNY***ANSIQY**********SS*******TQAQVFADNVNLPEWSSLITAVVDPEIQKLDSYFGISTASKEPLSPLPPLPSNDPLWWPTITDFEDDSWCSIYQENYN*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKKVYKKEKDPPMNHRDDTIESMNHNSENNGTESTNPTRYNCIMYPEGQSSAGNVNAYSENMQQTFHNSTSLEIPHQMDSTNHGVVNCTQYGNPNPNPNANQFASPNPYPNPGQNIKDFSCNYSGVANSIQYANTSQNDINASSIAFESMPTQAQVFADNVNLPEWSSLITAVVDPEIQKLDSYFGISTASKEPLSPLPPLPSNDPLWWPTITDFEDDSWCSIYQENYNAPNGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	396	2.2.26 [Sep-21-2011]
A0SPJ4	405	NAC transcription factor	N/A	no	0.376	0.367	0.414	9e-28
A2YMR0	425	NAC transcription factor	N/A	no	0.414	0.385	0.379	1e-27
O49255	268	NAC transcription factor	yes	no	0.368	0.544	0.427	1e-27
Q8H4S4	425	NAC transcription factor	yes	no	0.414	0.385	0.384	1e-27
A0SPJ6	396	NAC transcription factor	N/A	no	0.376	0.376	0.412	2e-27
A0SPJ9	402	NAC transcription factor	N/A	no	0.376	0.370	0.401	6e-27
Q52QH4	318	NAC domain-containing pro	no	no	0.446	0.556	0.367	1e-26
Q9C932	317	NAC domain-containing pro	no	no	0.462	0.577	0.349	2e-26
A0SPJ3	405	NAC transcription factor	N/A	no	0.376	0.367	0.404	2e-26
Q8GY42	323	NAC transcription factor	no	no	0.411	0.504	0.407	3e-26

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  124 bits (312), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 101/188 (53%), Gaps = 39/188 (20%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YLKKK    PLP N I E+ LY F P +L ++  +      E+E +FF+
Sbjct: 40  FHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKATIG-----EQEWYFFS 94

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKG---ALV----GFKKQLVYYR 113
           PR+RK+ NG R NR       + SGYWK+TG DK I   G    LV    G KK LV+YR
Sbjct: 95  PRDRKYPNGARPNRA------ATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYR 148

Query: 114 KNPEAGGEGEKNDWIKTDWIMHEFRV---------PNNPTP---RKKDGTNMEL-DWALC 160
             P  G        +KT+WIMHE+R+          N P P     +   ++ L DW LC
Sbjct: 149 GKPPKG--------LKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLC 200

Query: 161 KIYKKVYK 168
           +IYKK+ K
Sbjct: 201 RIYKKINK 208

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).
Triticum dicoccoides (taxid: 85692)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  124 bits (312), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 104/203 (51%), Gaps = 39/203 (19%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YLKKK  + PLP   I E+ LY F P +L ++      +  E+E +FF+
Sbjct: 35  FHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEK-----ANFGEQEWYFFS 89

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGAL---VGFKKQLVYYRKNPE 117
           PR+RK+ NG R NR       + SGYWK+TG DK I   G+    VG KK LV+YR  P 
Sbjct: 90  PRDRKYPNGARPNRA------ATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPP 143

Query: 118 AGGEGEKNDWIKTDWIMHEFRVPNN------------PTPRKKDGTNMEL-----DWALC 160
            G        +KT+WIMHE+R+ +             P P    G+   +     DW LC
Sbjct: 144 KG--------VKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLC 195

Query: 161 KIYKKVYKKEKDPPMNHRDDTIE 183
           +IYKK  K          +D++E
Sbjct: 196 RIYKKTNKAGAGQRSMECEDSVE 218

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 97/166 (58%), Gaps = 20/166 (12%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL+ +  ++P P + I E+ +Y F P QL ++      +  E E +FF+
Sbjct: 15  FHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEK-----TEFGENEWYFFS 69

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PRERK+ NG R NR       + SGYWK+TG DK+I    + VG KK LV+Y+  P  G 
Sbjct: 70  PRERKYPNGVRPNRA------AVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKG- 122

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELD-WALCKIYKK 165
                  IKTDWIMHE+R+ ++     K   +M LD W LC+IYKK
Sbjct: 123 -------IKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKK 161

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 105/203 (51%), Gaps = 39/203 (19%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YLKKK  + PLP   I E+ LY F P  L ++      +  E+E +FF+
Sbjct: 35  FHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEK-----ANFGEQEWYFFS 89

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGAL---VGFKKQLVYYRKNPE 117
           PR+RK+ NG R NR       + SGYWK+TG DK I   G+    VG KK LV+YR  P 
Sbjct: 90  PRDRKYPNGARPNRA------ATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPP 143

Query: 118 AGGEGEKNDWIKTDWIMHEFRVPNN-------PTPRK---------KDGTNMEL-DWALC 160
            G        +KT+WIMHE+R+ +         T R+         K   ++ L DW LC
Sbjct: 144 KG--------VKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLC 195

Query: 161 KIYKKVYKKEKDPPMNHRDDTIE 183
           +IYKK  K          +D++E
Sbjct: 196 RIYKKTNKAGAGQRSMECEDSVE 218

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 96/182 (52%), Gaps = 33/182 (18%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YLKKK    PLP   I E+ LY F P +L ++         E+E +FF+
Sbjct: 34  FHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEK-----ATFGEQEWYFFS 88

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGA---LVGFKKQLVYYRKNPE 117
           PR+RK+ NG R NR       + SGYWK+TG DK I   G     VG KK LV+YR  P 
Sbjct: 89  PRDRKYPNGARPNRA------ATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPP 142

Query: 118 AGGEGEKNDWIKTDWIMHEFRVPN--------NPTPRKKDGTNMEL---DWALCKIYKKV 166
            G        +KT+WIMHE+R+ +         P P      +  L   DW LC+IYKK+
Sbjct: 143 KG--------LKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKI 194

Query: 167 YK 168
            K
Sbjct: 195 NK 196

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  122 bits (305), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 95/182 (52%), Gaps = 33/182 (18%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YLKKK    PLP   I E+ LY F P +L ++         E+E +FF+
Sbjct: 34  FHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEK-----ATFGEQEWYFFS 88

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGA---LVGFKKQLVYYRKNPE 117
           PR+RK+ NG R NR       + SGYWK+TG DK I   G     VG K  LV+YR  P 
Sbjct: 89  PRDRKYPNGARPNRA------ATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPP 142

Query: 118 AGGEGEKNDWIKTDWIMHEFRVPNN----------PTPRKKDGTNMEL-DWALCKIYKKV 166
            G        +KT+WIMHE+R+ +           P        ++ L DW LC+IYKK+
Sbjct: 143 KG--------LKTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKKI 194

Query: 167 YK 168
            K
Sbjct: 195 NK 196

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  120 bits (302), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 111/212 (52%), Gaps = 35/212 (16%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL +KV  +PLP   I E+ LY   P  L ++          KE +FFT
Sbjct: 27  FHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKAL-----FGRKEWYFFT 81

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGAL--VGFKKQLVYYRKNPEA 118
           PR+RK+ NG+R NR       +G GYWK+TGADK +  KG+   VG KK LV+Y      
Sbjct: 82  PRDRKYPNGSRPNRA------AGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPR 135

Query: 119 GGEGEKNDWIKTDWIMHEFRVPN-NPTPRKKDGTNMELDWALCKIY------KKVYKKEK 171
           G        +KTDWIMHE+R+ + +  P  K G+    +W LC++Y      +KV  +++
Sbjct: 136 G--------VKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKLEQQ 187

Query: 172 D-------PPMNHRDDTIESMNHNSENNGTES 196
           D        P NH     E M+  + +  ++S
Sbjct: 188 DVASVAAAAPRNHHHQNGEVMDAAAADTMSDS 219

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  120 bits (302), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 109/226 (48%), Gaps = 43/226 (19%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL +K          I EI LY F P  L  +         EKE +FF+
Sbjct: 20  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL-----FGEKEWYFFS 74

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG+R NRV      +GSGYWK+TG DK I  +G  VG KK LV+Y      G 
Sbjct: 75  PRDRKYPNGSRPNRV------AGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG- 127

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKKVYKKEKDPPMN---- 176
                   KT+WIMHE+R+     P +++G+    DW LC+IYKK    +K    N    
Sbjct: 128 -------TKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQVYDNGIAN 177

Query: 177 -----------------HRDDTIESMNHNSENNGTESTNPTRYNCI 205
                            H +D ++S +   +N   + +NP R + +
Sbjct: 178 AREFSNNGTSSTTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSL 223

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 97/188 (51%), Gaps = 39/188 (20%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YLKKK    PLP   I E+ LY F P +L ++         E+E +FF+
Sbjct: 39  FHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEK-----ATFGEQEWYFFS 93

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKG---ALV----GFKKQLVYYR 113
           PR+RK+ NG R NR       + SGYWK+TG DK I   G    LV    G KK LV+YR
Sbjct: 94  PRDRKYPNGARPNRA------ATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYR 147

Query: 114 KNPEAGGEGEKNDWIKTDWIMHEFRVPN--------NPTPRKKDGTNMEL-----DWALC 160
             P  G        +KT+WIMHE+R+ +         P P    G+         DW LC
Sbjct: 148 GKPPKG--------LKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLC 199

Query: 161 KIYKKVYK 168
           +IYKK+ K
Sbjct: 200 RIYKKINK 207

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  119 bits (299), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 36/199 (18%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YLKKK  + PLP + I EI LY F P +L  +         E E +FF+
Sbjct: 22  FHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSK-----ASFGEHEWYFFS 76

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSI-KFKGALVGFKKQLVYYRKNPEAG 119
           PR+RK+ NG R NR       + SGYWK+TG DK I       VG KK LV+Y   P  G
Sbjct: 77  PRDRKYPNGVRPNRA------ATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKG 130

Query: 120 GEGEKNDWIKTDWIMHEFRV----------PNNPTPRKKDGTNMELDWALCKIYKKVYKK 169
                   IKTDWIMHE+R+          P + T  +K+   ++ DW LC+IYKK    
Sbjct: 131 --------IKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLD-DWVLCRIYKK--NS 179

Query: 170 EKDPPMNH---RDDTIESM 185
            + P M     R+D +E M
Sbjct: 180 SQRPTMERVLLREDLMEGM 198

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	396
255544902	522	conserved hypothetical protein [Ricinus	0.424	0.321	0.449	1e-35
224106189	513	NAC domain protein, IPR003441 [Populus t	0.378	0.292	0.479	1e-33
225435399	406	PREDICTED: uncharacterized protein LOC10	0.371	0.362	0.479	3e-33
297746301	364	unnamed protein product [Vitis vinifera]	0.386	0.420	0.437	3e-33
224106187	386	NAC domain protein, IPR003441 [Populus t	0.386	0.396	0.459	8e-33
255553053	320	transcription factor, putative [Ricinus	0.383	0.475	0.439	2e-31
147789356	330	hypothetical protein VITISV_034302 [Viti	0.378	0.454	0.434	3e-31
224143770	432	NAC domain protein, IPR003441 [Populus t	0.426	0.391	0.419	5e-31
224054978	441	NAC domain protein, IPR003441 [Populus t	0.406	0.365	0.430	5e-30
395395195	316	NAC domain-containing protein [Tamarix h	0.366	0.458	0.436	1e-27

>gi|255544902|ref|XP_002513512.1| conserved hypothetical protein [Ricinus communis] gi|223547420|gb|EEF48915.1| conserved hypothetical protein [Ricinus communis]

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/198 (44%), Positives = 120/198 (60%), Gaps = 30/198 (15%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           FCP D EL++ YL++KV ++ LPPN+I+ + LYNF PE L +    KY +  E E +FFT
Sbjct: 113 FCPSDEELIIHYLRRKVHDQILPPNKIISLDLYNFNPEFLAE----KYANYGENEWYFFT 168

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR +K++NG R  R       +  GYWK+TGADK IK +  +VGF+K LV+Y   P +G 
Sbjct: 169 PRAKKYKNGNRPRR------SADGGYWKATGADKEIKCRDIVVGFRKALVFYTGKPPSG- 221

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKK---DGT--NMEL-DWALCKIYKKVYK------ 168
                  +KT+WIMHE+RV   P  RK+   DGT  NM L DW LC+IYKK  K      
Sbjct: 222 -------VKTNWIMHEYRVDKPPPLRKRKRDDGTDDNMTLDDWVLCRIYKKSEKPNVRIR 274

Query: 169 KEKDPPMNHRDDTIESMN 186
           K ++P M   D+  E M+
Sbjct: 275 KAEEPDMQLDDNEDEDMD 292

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106189|ref|XP_002314078.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222850486|gb|EEE88033.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/171 (47%), Positives = 110/171 (64%), Gaps = 21/171 (12%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           FCP D EL++ YL  KVK  PLP N+I+++ LY + PE L      +Y+   EKE +FFT
Sbjct: 114 FCPHDHELVIHYLTNKVKGLPLPRNKIVDVILYQYDPEYLAD----RYQKFGEKEWYFFT 169

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK++NG+R NR       +  GYWK+TGADK+I    A+VG++K LVYY       G
Sbjct: 170 PRDRKYKNGSRPNRA------ANGGYWKATGADKNITHDEAVVGYRKALVYY------TG 217

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGT-NMELD-WALCKIYKKVYKK 169
           +  K D  KT+WIMHEFRV N P P+ ++   +M LD W LC+IYKK  K+
Sbjct: 218 KAPKGD--KTNWIMHEFRV-NEPIPQVRNHRDDMRLDEWVLCRIYKKQEKR 265

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435399|ref|XP_002282639.1| PREDICTED: uncharacterized protein LOC100250078 [Vitis vinifera]

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 104/167 (62%), Gaps = 20/167 (11%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D E +V YL+KKV ++PLPPN+I+E+ LY + PE    EL  +Y+     E F+FT
Sbjct: 45  FNPTDAETIVYYLRKKVDHQPLPPNKIIEVNLYAYDPE----ELAARYEPCGNDEWFYFT 100

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG R NR         +G+WK+TGADK IKF+   VG++K LV+YR  P    
Sbjct: 101 PRDRKYPNGQRPNRSI------TNGHWKATGADKEIKFEDCKVGYRKSLVFYRGGPR--- 151

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTN-MEL-DWALCKIYKK 165
                D +KT+W+MHEFRV   P P  + G N M L D  LCKIYKK
Sbjct: 152 -----DGVKTNWMMHEFRVAEPPKPPSRSGVNDMRLDDCVLCKIYKK 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746301|emb|CBI16357.3| unnamed protein product [Vitis vinifera]

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 23/176 (13%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D E++V YL+KK+ ++ LPPN+I+E+ LY + P+    EL  +Y+     E F+FT
Sbjct: 44  FNPTDAEIIVFYLRKKIDHQSLPPNKIIEVNLYGYDPD----ELAARYEPSGNDEWFYFT 99

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PRERK++NG R NR  G G      YWK+TGADK IKF+   VG++K LV+YR       
Sbjct: 100 PRERKYRNGQRPNRSIGEG------YWKATGADKEIKFEDRTVGYRKALVFYR------- 146

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTN-MEL-DWALCKIYK---KVYKKEK 171
            G   + +KT+WIMHEF V   P P ++ G N M L D  LC++Y+   ++YK+ +
Sbjct: 147 -GSAQNGVKTNWIMHEFTVAKPPGPPRRSGVNDMRLDDCVLCRVYRTDERIYKRSR 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106187|ref|XP_002314077.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222850485|gb|EEE88032.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 108/172 (62%), Gaps = 19/172 (11%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           FCP + EL++ YLK KV   PLP NRI ++ LY   PE+L ++    +K   E+E +FFT
Sbjct: 89  FCPHNHELVLHYLKNKVSGLPLPRNRIADVSLYQHNPEELAEQ----FKHYGEREWYFFT 144

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR++K++NGTR NR       +G GYWK+TGADK I    A+VG++K LVYY       G
Sbjct: 145 PRDKKYRNGTRPNRA------AGGGYWKATGADKKIVHDKAIVGYRKSLVYY------NG 192

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELD-WALCKIYKKVYKKEK 171
           +  K D  KT+W+MHEFR+     P + +  +M LD W LC+IYKK+ K  K
Sbjct: 193 KAPKGD--KTNWMMHEFRMEAAAPPIRNNINDMRLDEWVLCRIYKKIQKPVK 242

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553053|ref|XP_002517569.1| transcription factor, putative [Ricinus communis] gi|223543201|gb|EEF44733.1| transcription factor, putative [Ricinus communis]

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 109/173 (63%), Gaps = 21/173 (12%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL++K+ N+ LPP+RI E+++Y F PE L  +        RE E +FF+
Sbjct: 70  FKPSDGELIVHYLQRKILNQTLPPHRINELEMYKFNPETLAADYASSGNGGRE-EWYFFS 128

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR++K+ NG+RL R      D   GYWKSTGA K ++F G  VG K+ LV+Y++      
Sbjct: 129 PRDQKYPNGSRLRR------DPKCGYWKSTGAYKDVRFNGHKVGLKRLLVFYKR------ 176

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGT-NMEL---DWALCKIYKKVYKK 169
              ++ + KTDWIMHEF + NNP  R++ G  +MEL   DW LC++Y ++Y K
Sbjct: 177 ---RSPFHKTDWIMHEFSI-NNPLDRRRPGIHDMELWQHDWVLCRVYNRIYNK 225

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789356|emb|CAN73322.1| hypothetical protein VITISV_034302 [Vitis vinifera]

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 25/175 (14%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D E++V YL+KK+ ++ LPPN+I+E+ LY + P+    EL  +Y+     E F+FT
Sbjct: 43  FYPTDAEIIVFYLRKKIDHQSLPPNKIIEVNLYAYDPD----ELAARYEPSGNDEWFYFT 98

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PRERK++NG R NR  G G      YWK+TGA+K IKF+   VG++K LV+YR +P+ G 
Sbjct: 99  PRERKYRNGQRPNRSIGEG------YWKATGAEKEIKFEDRTVGYRKALVFYRGSPQNG- 151

Query: 121 EGEKNDWIKTDWIMHEFRV--PNNPTPRKKDGTNMEL-DWALCKIYK---KVYKK 169
                  +KT+WIMHEF V  P  P PR+    +M L D  LC++ +   ++YK+
Sbjct: 152 -------VKTNWIMHEFTVAKPTGP-PRRSGANDMRLDDCVLCRVCRTDERIYKR 198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143770|ref|XP_002325069.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222866503|gb|EEF03634.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/198 (41%), Positives = 108/198 (54%), Gaps = 29/198 (14%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+ CYL  K++N PLP N I E+ LY + PE L +     Y+   EKE +F T
Sbjct: 45  FKPKDQELISCYLLCKIRNRPLPRNGIHEVTLYKYNPETLAE----NYEPYGEKEWYFLT 100

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG R NR       +G GYWK+TGAD  +     ++G KK LV+YR     GG
Sbjct: 101 PRDRKYPNGDRPNRA------AGDGYWKATGADTDVISANQVIGSKKTLVFYRGKAPGGG 154

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELD-WALCKIYKKVYKKEKDPPMNH-- 177
                   KT+WIMHE+R  N+    K+    M LD W LC+I+ +       PP N   
Sbjct: 155 --------KTNWIMHEYRARNSDGAPKRTNDGMRLDEWVLCRIHNRT----DGPPTNRIN 202

Query: 178 --RDDTIESMNHNSENNG 193
             +DD IE  +  SENNG
Sbjct: 203 GLQDDEIE--DQPSENNG 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054978|ref|XP_002298396.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222845654|gb|EEE83201.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/193 (43%), Positives = 106/193 (54%), Gaps = 32/193 (16%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL++ YL KKVK  PLP NRI+   LY F PE    +L  +Y    EKE +FFT
Sbjct: 55  FRPHDHELVLHYLDKKVKGLPLPMNRIINADLYQFDPE----DLAAQYSHHGEKEWYFFT 110

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKS-------------IKFKGALVGFKK 107
           PR RK++NGTR NR       +G GYWK+TGADK              I ++  LVG +K
Sbjct: 111 PRNRKYKNGTRPNRA------AGGGYWKATGADKGITYEKRVIEAGKKITYQKTLVGHRK 164

Query: 108 QLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMEL-DWALCKIYKKV 166
            LVYY   P  G         KT+WIMHEFR+ ++P   + +  +M L D  LC+IYKK 
Sbjct: 165 ALVYYAGKPPKGD--------KTNWIMHEFRLDDSPLHVRNNRDDMRLDDCVLCRIYKKR 216

Query: 167 YKKEKDPPMNHRD 179
            K   +   N R+
Sbjct: 217 EKSTTNASTNVRN 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|395395195|gb|AFN55272.1| NAC domain-containing protein [Tamarix hispida]

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 20/165 (12%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+VCYLK +  + P P + I E+ +Y F P QL ++      +  E E +FFT
Sbjct: 17  FHPTDEELIVCYLKNQAVSLPCPASIIPEVDIYKFDPWQLPEK-----AEFGESEWYFFT 71

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PRERK+ NG R NR       + SGYWK+TG DK+I      VG KK LV+Y+  P  G 
Sbjct: 72  PRERKYPNGARPNRA------AVSGYWKATGTDKAIYSGNKYVGIKKALVFYKGRPPKGN 125

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKK 165
                   KT+WIMHE+R+ ++P   KK G+    DW LC+IY+K
Sbjct: 126 --------KTEWIMHEYRLTDSPV-NKKHGSMRLDDWVLCRIYRK 161

Source: Tamarix hispida

Species: Tamarix hispida

Genus: Tamarix

Family: Tamaricaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	396
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.429	0.536	0.390	3.6e-27
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.356	0.526	0.416	8.4e-26
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.454	0.557	0.368	1e-25
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.502	0.703	0.355	4.2e-24
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.351	0.549	0.416	1.1e-23
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.353	0.437	0.405	2.9e-23
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.315	0.398	0.450	3.4e-23
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.348	0.435	0.425	3.8e-23
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.510	0.511	0.303	1.3e-22
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.356	0.337	0.392	1.4e-22

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 77/197 (39%), Positives = 99/197 (50%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL+V YL +K          I EI LY F P  L    K  +    EKE +FF+
Sbjct:    20 FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPN--KALFG---EKEWYFFS 74

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
             PR+RK+ NG+R NRV      +GSGYWK+TG DK I  +G  VG KK LV+Y       G
Sbjct:    75 PRDRKYPNGSRPNRV------AGSGYWKATGTDKIISTEGQRVGIKKALVFYI------G 122

Query:   121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCXXXXXXXXXXXDPPMNHRDD 180
             +  K    KT+WIMHE+R+     P +++G+    DW LC                  D+
Sbjct:   123 KAPKGT--KTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQV----YDN 173

Query:   181 TIESMNHNSENNGTEST 197
              I +    S NNGT ST
Sbjct:   174 GIANAREFS-NNGTSST 189

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 67/161 (41%), Positives = 92/161 (57%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL+V YL+ +  ++P P + I E+ +Y F P QL ++      +  E E +FF+
Sbjct:    15 FHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKT-----EFGENEWYFFS 69

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
             PRERK+ NG R NR       + SGYWK+TG DK+I    + VG KK LV+Y+  P  G 
Sbjct:    70 PRERKYPNGVRPNRA------AVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKG- 122

Query:   121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELD-WALC 160
                    IKTDWIMHE+R+ ++     K   +M LD W LC
Sbjct:   123 -------IKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLC 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
 Identities = 76/206 (36%), Positives = 100/206 (48%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL+V YLKKK  + PLP + I EI LY F P +L    K  +    E E +FF+
Sbjct:    22 FHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPS--KASFG---EHEWYFFS 76

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSI-KFKGALVGFKKQLVYYRKNPEAG 119
             PR+RK+ NG R NR       + SGYWK+TG DK I       VG KK LV+Y   P   
Sbjct:    77 PRDRKYPNGVRPNRA------ATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPP-- 128

Query:   120 GEGEKNDWIK-----TDWIMHEFRVPNNPTPRKKDGTNMELDWALCXXXXXXXXXXXDPP 174
              +G K DWI      TD  +     P + T  +K+   ++ DW LC            P 
Sbjct:   129 -KGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLD-DWVLCRIYKKNSSQR--PT 184

Query:   175 MNH---RDDTIESMNHNSENNGTEST 197
             M     R+D +E M   S  N + ++
Sbjct:   185 MERVLLREDLMEGMLSKSSANSSSTS 210

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 81/228 (35%), Positives = 117/228 (51%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL+  YL +K  +E +    I EI LY F P +L  E+ + Y    EKE +FF+
Sbjct:    13 FHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELP-EMSL-YG---EKEWYFFS 67

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
             PR+RK+ NG+R NR       +G+GYWK+TGADK I  K   +G KK LV+Y       G
Sbjct:    68 PRDRKYPNGSRPNRA------AGTGYWKATGADKPIG-KPKTLGIKKALVFY------AG 114

Query:   121 EGEKNDWIKTDWIMHEFRVPN---NPTPRKKDGTNMELDWALCXXXXXXXXXXXDPPMNH 177
             +  K   IKT+WIMHE+R+ N   + +  KK+   ++ DW LC             P + 
Sbjct:   115 KAPKG--IKTNWIMHEYRLANVDRSASVNKKNNLRLD-DWVLCRIYNKKGTMEKYFPADE 171

Query:   178 RDDTIESMNHNSENNGT-ESTNPTRYNCIMYPEGQSSAGNVNAYSENM 224
             +  T      +S    T +ST PT    +   +  SS G+ +  S ++
Sbjct:   172 KPRTTTMAEQSSSPFDTSDSTYPT----LQEDDSSSSGGHGHVVSPDV 215

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 67/161 (41%), Positives = 94/161 (58%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL++ YL +K  ++P+P   I E+ LY + P  L       Y    EKE +FF+
Sbjct:    16 FHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPD--MALYG---EKEWYFFS 70

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
             PR+RK+ NG+R NR       +G+GYWK+TGADK I  +   VG KK LV+Y   P    
Sbjct:    71 PRDRKYPNGSRPNRA------AGTGYWKATGADKPIG-RPKPVGIKKALVFYSGKPP--- 120

Query:   121 EGEKNDWIKTDWIMHEFRVPN-NPTPRKKDGTNMELDWALC 160
              GEK     T+WIMHE+R+ + + + RKK+   ++ DW LC
Sbjct:   121 NGEK-----TNWIMHEYRLADVDRSVRKKNSLRLD-DWVLC 155

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 69/170 (40%), Positives = 92/170 (54%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL++ YLK+K  + PLP   I ++ LY F P     EL  K     E+E +FF+
Sbjct:    23 FHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDP----WELPAK-ASFGEQEWYFFS 77

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGA----LVGFKKQLVYYRKNP 116
             PR+RK+ NG R NR       + SGYWK+TG DK +   G      VG KK LV+Y   P
Sbjct:    78 PRDRKYPNGARPNRA------ATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKP 131

Query:   117 EAGGEGEKNDWIKTDWIMHEFRVPNN-PTP-----RKKDGTNMELDWALC 160
               G        +K+DWIMHE+R+ +N PT       KK+   ++ DW LC
Sbjct:   132 PKG--------VKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLD-DWVLC 172

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
 Identities = 68/151 (45%), Positives = 82/151 (54%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQL--KQ-------ELKVKY--K 49
             F P D ELLV YL +KV         I +I LY F P  L  KQ       E    Y  K
Sbjct:    20 FYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKQTCFTFVGEYNCNYLGK 79

Query:    50 DL-REKEMFFFTPRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQ 108
              L  EKE +FF+PR+RK+ NG+R NRV      +GSGYWK+TG DK I   G  VG KK 
Sbjct:    80 ALFGEKEWYFFSPRDRKYPNGSRPNRV------AGSGYWKATGTDKIITADGRRVGIKKA 133

Query:   109 LVYYRKNPEAGGEGEKNDWIKTDWIMHEFRV 139
             LV+Y       G+  K    KT+WIMHE+R+
Sbjct:   134 LVFY------AGKAPKGT--KTNWIMHEYRL 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 68/160 (42%), Positives = 88/160 (55%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL+V YL +K          I EI LY F P  L    K  +    EKE +FF+
Sbjct:    20 FYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPS--KALFG---EKEWYFFS 74

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
             PR+RK+ NG+R NRV      +GSGYWK+TG DK I  +G  VG KK LV+Y       G
Sbjct:    75 PRDRKYPNGSRPNRV------AGSGYWKATGTDKVISTEGRRVGIKKALVFYI------G 122

Query:   121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALC 160
             +  K    KT+WIMHE+R+     P +++G+    DW LC
Sbjct:   123 KAPKGT--KTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 157

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 70/231 (30%), Positives = 114/231 (49%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL+  YL+KKV ++ +  + I +I LY   P  L++  K+ +++  + + +FF+
Sbjct:    13 FHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEE--QSDWYFFS 70

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
              +++K+  GTR NR T +G      +WK+TG DK+I  + +L+G +K LV+Y K     G
Sbjct:    71 HKDKKYPTGTRTNRATKAG------FWKATGRDKAIYLRHSLIGMRKTLVFY-KGRAPNG 123

Query:   121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCXXXXXXXXXXX-----DPPM 175
             +       K+DWIMHE+R+  +     ++GT  E  W +C                D   
Sbjct:   124 Q-------KSDWIMHEYRLETD-----ENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSP 171

Query:   176 NH-RDDTIESMNHNSENNGTESTNPTRYNCIMYPEGQSSA-G-NVNAYSEN 223
             +H  DD +  M    E NG     P  +    +   Q    G N +AY+ N
Sbjct:   172 SHWYDDQLSFMASELETNGQRRILPNHHQQQQHEHQQHMPYGLNASAYALN 222

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 66/168 (39%), Positives = 95/168 (56%)

Query:     1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
             F P D EL+  YLK+KV++ PL    I ++ +Y + P  L      K+    EKE +F+ 
Sbjct:    22 FHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP-----KFAMTGEKEWYFYC 76

Query:    61 PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSI-KFKG-ALVGFKKQLVYYRKNPEA 118
             PR+RK++N +R NRVTG+G      +WK+TG D+ I   +G   +G KK LV+Y+     
Sbjct:    77 PRDRKYRNSSRPNRVTGAG------FWKATGTDRPIYSSEGNKCIGLKKSLVFYK----- 125

Query:   119 GGEGEKNDWIKTDWIMHEFRVPN--NPTPRKK---DGTNMELD-WALC 160
              G   K   +KTDW+MHEFR+P+   P+P  K   D      D WA+C
Sbjct:   126 -GRAAKG--VKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAIC 170

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024595001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (364 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	396
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	9e-39

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  135 bits (341), Expect = 9e-39
 Identities = 59/142 (41%), Positives = 82/142 (57%), Gaps = 20/142 (14%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIM-EIKLYNFTPEQLKQELKVKYKDLREKEMFFF 59
           F P D EL+V YLK+KV  +PLP   ++ E+ +Y F P     +L        ++E +FF
Sbjct: 7   FHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEP----WDLPDGKAKGGDREWYFF 62

Query: 60  TPRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIK-FKGALVGFKKQLVYYRKNPEA 118
           +PR+RK+ NG+R NR T      GSGYWK+TG DK +    G +VG KK LV+Y+     
Sbjct: 63  SPRDRKYPNGSRTNRAT------GSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPK 116

Query: 119 GGEGEKNDWIKTDWIMHEFRVP 140
           G         KTDW+MHE+R+ 
Sbjct: 117 G--------EKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	396
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=7.4e-37  Score=264.56  Aligned_cols=121  Identities=45%  Similarity=0.831  Sum_probs=92.1

Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCC-CceeecCCCCCCchhhhHhhhhhhhcCCCceEEEeccccccCCCCCccceeccCC
Q 036898            1 FCPLDWELLVCYLKKKVKNEPLPP-NRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSG   79 (396)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~-~~I~evDVY~~ePweLp~~~~~~~~~~~e~eWYFFspr~rK~~nG~R~nRttG~g   79 (396)
                      |+|||+|||.+||++|+.|.+++. ++|+++|||+++||+|+..     ...++++||||+++++++.+|.|.+|++   
T Consensus         7 F~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~-----~~~~~~~~yFF~~~~~~~~~~~r~~R~~---   78 (129)
T PF02365_consen    7 FRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAK-----FKGGDEEWYFFSPRKKKYPNGGRPNRVT---   78 (129)
T ss_dssp             E---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHH-----SSS-SSEEEEEEE----------S-EEE---
T ss_pred             ecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhh-----ccCCCceEEEEEecccccCCcccccccc---
Confidence            899999999999999999999887 8999999999999999953     3346779999999999999999999988   


Q ss_pred             CCCCCceEeecCCCceEee-CCeeEEEEEEeeeecCCCCCCCCCCCCCccccCeeEEeeecC
Q 036898           80 PDSGSGYWKSTGADKSIKF-KGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVP  140 (396)
Q Consensus        80 ~~~ggG~WK~tG~~k~I~~-~G~vVG~KKtLvFy~gr~p~G~~G~~~~~~KT~WvMhEYrL~  140 (396)
                         ++|+||.+|+.+.|.+ .|.+||+|++|+||.++.+++        .+|+|+||||+|.
T Consensus        79 ---~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~--------~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 ---GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNG--------KKTGWVMHEYSLE  129 (129)
T ss_dssp             ---TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS---------EEEEEEEEEEEE-
T ss_pred             ---cceEEeecccccccccccceeeeeEEEEEEEeccCCCC--------CcCCeEEEEEEeC
Confidence               8999999999999998 689999999999998877777        8999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	396
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-23
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-23
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		7e-21

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 22/160 (13%)
Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL +K          I EI LY F P  L  +         EKE +FF+
Sbjct: 23  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL-----FGEKEWYFFS 77
Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG+R NRV      +GSGYWK+TG DK I  +G  VG KK LV+Y      G 
Sbjct: 78  PRDRKYPNGSRPNRV------AGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG- 130
Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALC 160
                   KT+WIMHE+R+     P +++G+    DW LC
Sbjct: 131 -------TKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 160

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 22/160 (13%)
Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL +K          I EI LY F P  L  +         EKE +FF+
Sbjct: 26  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL-----FGEKEWYFFS 80
Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG+R NRV      +GSGYWK+TG DK I  +G  VG KK LV+Y      G 
Sbjct: 81  PRDRKYPNGSRPNRV------AGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG- 133
Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALC 160
                   KT+WIMHE+R+     P +++G+    DW LC
Sbjct: 134 -------TKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 163

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+  YL +K   + LP   I E+ LY F P  L +           +E +FFT
Sbjct: 21  FHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG-----AREWYFFT 75
Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG+R NR       +G+GYWK+TGADK +  +G  +G KK LV+Y      G 
Sbjct: 76  PRDRKYPNGSRPNRA------AGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG- 128
Query: 121 EGEKNDWIKTDWIMHEFRV-PNNPTPRKKDGTNMEL-DWALC 160
                  +KTDWIMHE+R+             ++ L DW LC
Sbjct: 129 -------VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLC 163

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	396
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	8e-52
1ut7_A	171	No apical meristem protein; transcription regulati	9e-51
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-10

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  170 bits (432), Expect = 8e-52
 Identities = 67/173 (38%), Positives = 91/173 (52%), Gaps = 21/173 (12%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+  YL +K   + LP   I E+ LY F P  L +           +E +FFT
Sbjct: 21  FHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERAL-----FGAREWYFFT 75

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG+R NR  G+G      YWK+TGADK +  +G  +G KK LV+Y      G 
Sbjct: 76  PRDRKYPNGSRPNRAAGNG------YWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG- 128

Query: 121 EGEKNDWIKTDWIMHEFRVPNN--PTPRKKDGTNMELDWALCKIYKKVYKKEK 171
                  +KTDWIMHE+R+ +        K G+    DW LC++Y K  + EK
Sbjct: 129 -------VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  167 bits (424), Expect = 9e-51
 Identities = 70/171 (40%), Positives = 90/171 (52%), Gaps = 22/171 (12%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL +K          I EI LY F P  L  +         EKE +FF+
Sbjct: 23  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL-----FGEKEWYFFS 77

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG+R NRV GSG      YWK+TG DK I  +G  VG KK LV+Y      G 
Sbjct: 78  PRDRKYPNGSRPNRVAGSG------YWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG- 130

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKKVYKKEK 171
                   KT+WIMHE+R+       +++G+    DW LC+IYKK    +K
Sbjct: 131 -------TKTNWIMHEYRLIEPS---RRNGSTKLDDWVLCRIYKKQSSAQK 171

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.6 bits (146), Expect = 4e-10
 Identities = 56/398 (14%), Positives = 116/398 (29%), Gaps = 105/398 (26%)

Query: 12  YLKKKVKNEPLPPNRIMEI------KLYN----FTPEQLKQELKVKYKDLREKEMFFFTP 61
           +L   +K E   P+ +  +      +LYN    F    + +     Y  LR+  +     
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL--QPYLKLRQALL----- 145

Query: 62  RERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGE 121
             R  +N      + G     GSG  K+  A               + +++         
Sbjct: 146 ELRPAKNVL----IDGVL---GSG--KTWVALDVCLSYKVQCKMDFK-IFWLN---LKNC 192

Query: 122 GEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKKVYKKEKDPPMNHR--- 178
                 ++    +  +++  N T R    +N++L     +   +   K K          
Sbjct: 193 NSPETVLEMLQKLL-YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE---NCLL 248

Query: 179 --DD-----TIESMNHNSENNGTESTNPTRYNCIMYPEGQSSAGNVNAYSENMQQTFHNS 231
              +        + N + +      T  TR+  +   +  S+A   +   ++   T    
Sbjct: 249 VLLNVQNAKAWNAFNLSCK---ILLT--TRFKQVT--DFLSAATTTHISLDHHSMTLTPD 301

Query: 232 TSLEI------------PHQMDSTNHGVVNCTQYGNPNPNPNA-NQFASPNPYPNPGQNI 278
               +            P ++ +T               NP   +            ++I
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTT---------------NPRRLSII---------AESI 337

Query: 279 KDFSCNYSGVANSIQYANTSQNDINASSIAFESMPTQAQ-------VFADNVNLPE---- 327
           +D    +    N           I  SS+     P + +       VF  + ++P     
Sbjct: 338 RDGLATWD---NWKHVNCDKLTTIIESSLNVLE-PAEYRKMFDRLSVFPPSAHIPTILLS 393

Query: 328 --WSSLITAVVDPEIQKLDSYFGISTASKEPLSPLPPL 363
             W  +I + V   + KL  Y  +    KE    +P +
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	396
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3.4e-48  Score=353.61  Aligned_cols=149  Identities=44%  Similarity=0.809  Sum_probs=125.5

Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCCCceeecCCCCCCchhhhHhhhhhhhcCCCceEEEeccccccCCCCCccceeccCCC
Q 036898            1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGP   80 (396)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~~~I~evDVY~~ePweLp~~~~~~~~~~~e~eWYFFspr~rK~~nG~R~nRttG~g~   80 (396)
                      |+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.     ...++++||||+++++||++|.|++|++    
T Consensus        21 F~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~-----~~~g~~ewYFFs~r~~ky~~g~R~nR~t----   91 (174)
T 3ulx_A           21 FHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPER-----ALFGAREWYFFTPRDRKYPNGSRPNRAA----   91 (174)
T ss_dssp             CCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGG-----CSSCSSEEEEEEECCC-----CCSCEEE----
T ss_pred             eCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhh-----hccCCceEEEEeccccccCCCCCceeec----
Confidence            9999999999999999999999999999999999999999987     4457889999999999999999999999    


Q ss_pred             CCCCceEeecCCCceEeeCCeeEEEEEEeeeecCCCCCCCCCCCCCccccCeeEEeeecCCCCCCCC--CCCCCCccceE
Q 036898           81 DSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRK--KDGTNMELDWA  158 (396)
Q Consensus        81 ~~ggG~WK~tG~~k~I~~~G~vVG~KKtLvFy~gr~p~G~~G~~~~~~KT~WvMhEYrL~~~~~~~~--~~~~~~~~d~V  158 (396)
                        ++||||++|+++.|...|.+||+||+|+||.|++|+|        .||+|+||||+|........  ..+.....+||
T Consensus        92 --~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g--------~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wV  161 (174)
T 3ulx_A           92 --GNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG--------VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWV  161 (174)
T ss_dssp             --TTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSC--------EEEEEEEEEEEECSCC-----------CCSSEE
T ss_pred             --CCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCC--------CcCCeEEEEEEeCCCCCcccccccCCCCCCCEE
Confidence              8999999999999998899999999999999999999        99999999999998754321  11111234999


Q ss_pred             EEEEEEcCCC
Q 036898          159 LCKIYKKVYK  168 (396)
Q Consensus       159 LCRIykK~~~  168 (396)
                      |||||+|+..
T Consensus       162 lCrvf~K~~~  171 (174)
T 3ulx_A          162 LCRLYNKKNE  171 (174)
T ss_dssp             EEEEEESCC-
T ss_pred             EEEEEEcCCC
Confidence            9999998753

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=5.7e-48  Score=351.16  Aligned_cols=146  Identities=47%  Similarity=0.810  Sum_probs=122.9

Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCCCceeecCCCCCCchhhhHhhhhhhhcCCCceEEEeccccccCCCCCccceeccCCC
Q 036898            1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGP   80 (396)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~~~I~evDVY~~ePweLp~~~~~~~~~~~e~eWYFFspr~rK~~nG~R~nRttG~g~   80 (396)
                      |+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.     ...++++||||+++++||++|.|++|+|    
T Consensus        23 F~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~-----~~~g~~ewyFFs~r~~k~~~g~R~~R~t----   93 (171)
T 1ut7_A           23 FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNK-----ALFGEKEWYFFSPRDRKYPNGSRPNRVA----   93 (171)
T ss_dssp             ECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHH-----SSSCSSEEEEEEECCC-------CCEEE----
T ss_pred             eCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhch-----hhcCCccEEEEeccccccCCCCcccccC----
Confidence            8999999999999999999999999999999999999999998     4567899999999999999999999999    


Q ss_pred             CCCCceEeecCCCceEeeCCeeEEEEEEeeeecCCCCCCCCCCCCCccccCeeEEeeecCCCCCCCCCCCCCCccceEEE
Q 036898           81 DSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALC  160 (396)
Q Consensus        81 ~~ggG~WK~tG~~k~I~~~G~vVG~KKtLvFy~gr~p~G~~G~~~~~~KT~WvMhEYrL~~~~~~~~~~~~~~~~d~VLC  160 (396)
                        ++||||++|+++.|...|.+||+||+|+||.+++++|        .||+|+||||+|......   .+.....+||||
T Consensus        94 --~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g--------~kT~WvMhEY~l~~~~~~---~~~~~~~~~VlC  160 (171)
T 1ut7_A           94 --GSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG--------TKTNWIMHEYRLIEPSRR---NGSTKLDDWVLC  160 (171)
T ss_dssp             --TTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSC--------EEEEEEEEEEEECCCC-----------CCEEEE
T ss_pred             --CCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCC--------CcCCeEEEEEEcCCCccc---cCcccCCCEEEE
Confidence              8999999999999999899999999999999999999        999999999999987521   111234599999


Q ss_pred             EEEEcCCC
Q 036898          161 KIYKKVYK  168 (396)
Q Consensus       161 RIykK~~~  168 (396)
                      |||+|...
T Consensus       161 rv~~k~~~  168 (171)
T 1ut7_A          161 RIYKKQSS  168 (171)
T ss_dssp             EEEECC--
T ss_pred             EEEEcCCC
Confidence            99999765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	396
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	4e-40

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  138 bits (348), Expect = 4e-40
 Identities = 69/165 (41%), Positives = 85/165 (51%), Gaps = 22/165 (13%)

Query: 1   FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFT 60
           F P D EL+V YL +K          I EI LY F P  L  +         EKE +FF+
Sbjct: 23  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL-----FGEKEWYFFS 77

Query: 61  PRERKHQNGTRLNRVTGSGPDSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGG 120
           PR+RK+ NG+R NRV       GSGYWK+TG DK I  +G  VG KK LV+Y      G 
Sbjct: 78  PRDRKYPNGSRPNRVA------GSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG- 130

Query: 121 EGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALCKIYKK 165
                   KT+WIMHE+R+          G+    DW LC+IYKK
Sbjct: 131 -------TKTNWIMHEYRLIEPSRRN---GSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	396
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-45  Score=328.85  Aligned_cols=144  Identities=48%  Similarity=0.821  Sum_probs=121.4

Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCCCceeecCCCCCCchhhhHhhhhhhhcCCCceEEEeccccccCCCCCccceeccCCC
Q 036898            1 FCPLDWELLVCYLKKKVKNEPLPPNRIMEIKLYNFTPEQLKQELKVKYKDLREKEMFFFTPRERKHQNGTRLNRVTGSGP   80 (396)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~~~I~evDVY~~ePweLp~~~~~~~~~~~e~eWYFFspr~rK~~nG~R~nRttG~g~   80 (396)
                      |+|||||||.+||++|+.|.+++.++|+++|||++|||+||+.     ...++++||||+++++++++|.|.+|++    
T Consensus        23 F~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~-----~~~~~~~wyFft~~~~k~~~g~r~~R~~----   93 (166)
T d1ut7a_          23 FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNK-----ALFGEKEWYFFSPRDRKYPNGSRPNRVA----   93 (166)
T ss_dssp             ECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHH-----SSSCSSEEEEEEECCC-------CCEEE----
T ss_pred             cCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccch-----hccCcceEEEEeeeccccCCCCcccccc----
Confidence            8999999999999999999999999999999999999999987     4557889999999999999999999999    


Q ss_pred             CCCCceEeecCCCceEeeCCeeEEEEEEeeeecCCCCCCCCCCCCCccccCeeEEeeecCCCCCCCCCCCCCCccceEEE
Q 036898           81 DSGSGYWKSTGADKSIKFKGALVGFKKQLVYYRKNPEAGGEGEKNDWIKTDWIMHEFRVPNNPTPRKKDGTNMELDWALC  160 (396)
Q Consensus        81 ~~ggG~WK~tG~~k~I~~~G~vVG~KKtLvFy~gr~p~G~~G~~~~~~KT~WvMhEYrL~~~~~~~~~~~~~~~~d~VLC  160 (396)
                        ++|+||++|+++.|.++|.+||+||+|+||.++.+++        .+|+|+||||+|.+.....   +.....+||||
T Consensus        94 --g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~--------~~t~W~M~EY~l~~~~~~~---~~~~~~~~VLC  160 (166)
T d1ut7a_          94 --GSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG--------TKTNWIMHEYRLIEPSRRN---GSTKLDDWVLC  160 (166)
T ss_dssp             --TTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSC--------EEEEEEEEEEEECCCC-----------CCEEEE
T ss_pred             --CCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCC--------CccCeEEEEEecCCccccc---CccccCCEEEE
Confidence              7899999999999999999999999999999999888        9999999999998865432   12234599999


Q ss_pred             EEEEcC
Q 036898          161 KIYKKV  166 (396)
Q Consensus       161 RIykK~  166 (396)
                      |||+|+
T Consensus       161 rI~~Kk  166 (166)
T d1ut7a_         161 RIYKKQ  166 (166)
T ss_dssp             EEEECC
T ss_pred             EEEecC
Confidence            999884