Citrus Sinensis ID: 036940

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MGSQYKPSNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKRSQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEcccEEccccccccEHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mgsqykpsnmdgvatVSNVKVVESskrvmfksSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLaetmpsvqVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKRSQ
Flexible Loop (DISEMBL)
mgsqykpsnmdgvatvsnvkvvesskrvmfkssDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKRSQ
Low Complexity Region (SEG)
MGSQYKPSNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVsnaiassyaalslaftlaITRFHNNAALGLIMLDLITMGLLFSANgaamaigmigLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKRSQ
Disordered region (IsUnstruct)
******************VKVVE*SKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNL*****
Disordered Region (DISOPRED)
*******************************SSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHK***
Disordered Region (DISEMBL)
*********MDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKRSQ
Disordered Region (DISPRO)
***************VSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKR**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSQYKPSNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKRSQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	199	2.2.26 [Sep-21-2011]
A7PTY8	202	CASP-like protein VIT_07s	yes	no	0.984	0.970	0.582	7e-49
A7NW78	195	CASP-like protein VIT_05s	no	no	0.894	0.912	0.486	2e-44
C6TBD0	188	CASP-like protein 6 OS=Gl	yes	no	0.884	0.936	0.489	2e-44
C6SZP8	187	CASP-like protein 5 OS=Gl	no	no	0.934	0.994	0.478	3e-41
B9RT04	192	CASP-like protein RCOM_06	N/A	no	0.964	1.0	0.452	7e-40
D7MAF6	190	CASP-like protein ARALYDR	N/A	no	0.909	0.952	0.412	1e-32
O23413	190	CASP-like protein At4g156	yes	no	0.899	0.942	0.408	1e-32
B9HMP6	193	CASP-like protein POPTRDR	yes	no	0.738	0.761	0.493	2e-31
C5XKI6	222	CASP-like protein Sb03g01	N/A	no	0.798	0.716	0.421	2e-30
Q8L8Z1	190	CASP-like protein At4g156	no	no	0.909	0.952	0.386	7e-30

>sp|A7PTY8|CSPL8_VITVI CASP-like protein VIT_07s0104g01350 OS=Vitis vinifera GN=VIT_07s0104g01350 PE=2 SV=1

 Score =  193 bits (490), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 117/201 (58%), Positives = 143/201 (71%), Gaps = 5/201 (2%)

Query: 1   MGSQYKPSNMDGV--ATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKET 58
           M SQ +P N+DGV     S+VKVVE  + V   SS+ +LRILG  LT IAA+V GVDK+T
Sbjct: 1   MESQCRP-NVDGVHNGVESHVKVVEKPRSV-GSSSEFVLRILGLLLTLIAAVVAGVDKQT 58

Query: 59  QIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAF-TLAITRFHNNA 117
           +II  TL +T+PS+ V VTAKW  MSAFVY +VSNAIA SYAA+SL   T+   R     
Sbjct: 59  KIIPLTLIKTLPSLHVPVTAKWSDMSAFVYLVVSNAIACSYAAISLVLVTMLGRRGKGGR 118

Query: 118 ALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSI 177
            L +I+LDL  +GLLFSANGAA A+G++G  GNSHV W KVCNVF  FC +  A+L LS 
Sbjct: 119 VLAVIVLDLHMVGLLFSANGAATAVGVLGQYGNSHVEWKKVCNVFDSFCHHLVASLALSF 178

Query: 178 LGSFAFLFLVAVAILNLHKRS 198
           LGS +FL LV +AILNLHK+S
Sbjct: 179 LGSLSFLGLVLLAILNLHKKS 199

Vitis vinifera (taxid: 29760)

>sp|A7NW78|CSPL5_VITVI CASP-like protein VIT_05s0020g01820 OS=Vitis vinifera GN=VIT_05s0020g01820 PE=2 SV=1

 Score =  178 bits (452), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 124/181 (68%), Gaps = 3/181 (1%)

Query: 17  SNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSV 76
             VKVV   K    +  D++LR++  +LT +AA+++GVDK+T+++S  L  T+P + V V
Sbjct: 17  KEVKVVTGGK---LRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPV 73

Query: 77  TAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSAN 136
           TAKW+++SAFVYF+VSNAIA SYAALSL  ++  ++ +    L + ++DL+ + LLFS+N
Sbjct: 74  TAKWRYLSAFVYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSN 133

Query: 137 GAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHK 196
           GAA AIG++G +GNS V W KVCNVFG FC     AL LS  G  AF  LV +A   L+K
Sbjct: 134 GAAGAIGLMGYEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNK 193

Query: 197 R 197
           R
Sbjct: 194 R 194

Vitis vinifera (taxid: 29760)

>sp|C6TBD0|CSPL6_SOYBN CASP-like protein 6 OS=Glycine max PE=2 SV=1

 Score =  178 bits (452), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 10/186 (5%)

Query: 22  VESSKR-VMFKSS-------DVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQ 73
           VES +R VM           D++LR+L F++T +AAIV+ VDK+T+++   L+++ P + 
Sbjct: 4   VESKEREVMVAKPVAVVGVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLN 63

Query: 74  VSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLI-MLDLITMGLL 132
           V +TAKW  MSAFVYFLV+NAIA +YAA+SL   L + R  +     LI +LD   + LL
Sbjct: 64  VPLTAKWHQMSAFVYFLVTNAIACTYAAMSLLLAL-VNRGKSKGLWTLIAVLDTFMVALL 122

Query: 133 FSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAIL 192
           FS NGAA A+G++G KGNSHV+WNKVCNVFG FC    A++ +S++GS AFL LV + ++
Sbjct: 123 FSGNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVV 182

Query: 193 NLHKRS 198
            LH+R+
Sbjct: 183 RLHRRT 188

Glycine max (taxid: 3847)

>sp|C6SZP8|CSPL5_SOYBN CASP-like protein 5 OS=Glycine max PE=2 SV=1

 Score =  167 bits (424), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 4/190 (2%)

Query: 10  MDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETM 69
           M+GV   S  + V  +K V    SD++LR+L F++T +AAIV+ VDK+T+++   L++++
Sbjct: 1   MEGVE--SKEREVMVAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSL 58

Query: 70  PSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLI-MLDLIT 128
           P + V +TAKW  MSA VYFLV+NAIA +YA LSL     + R  +     LI +LD   
Sbjct: 59  PPLDVPLTAKWHQMSAIVYFLVTNAIACTYAVLSLL-LALVNRGKSKGLWTLIAVLDAFM 117

Query: 129 MGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVA 188
           + LLFS NGAA A+G++G KGNSHV+WNKVCNVFG FC    A++ +S++GS AFL LV 
Sbjct: 118 VALLFSGNGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVI 177

Query: 189 VAILNLHKRS 198
           +  + LH+R+
Sbjct: 178 IPGVRLHRRN 187

Glycine max (taxid: 3847)

>sp|B9RT04|CSPL9_RICCO CASP-like protein RCOM_0680180 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1

 Score =  163 bits (413), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 90/199 (45%), Positives = 129/199 (64%), Gaps = 7/199 (3%)

Query: 1   MGSQYKPSNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQI 60
           M SQ K S +D +  + +  + E   R    +S ++LR+L F LT  AAIV GV+ +T+ 
Sbjct: 1   MDSQNKNS-VDAMDGIESRGMKERGGRT---NSFLVLRVLAFVLTSTAAIVHGVNNQTET 56

Query: 61  ISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALG 120
           +   L  +MP + V V AKW ++SAFV+F+VSNAIA SYAA+S+  +    +   +    
Sbjct: 57  VPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNAIACSYAAISVMLSFCGKK---SMVPI 113

Query: 121 LIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGS 180
           ++ LDL+ + LLFS+NGAA AIG++G KGNSHV WNKVCNVFG FC    A++VLS++GS
Sbjct: 114 ILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVKWNKVCNVFGKFCNQVAASVVLSLIGS 173

Query: 181 FAFLFLVAVAILNLHKRSQ 199
             F+ LV +    LH +S+
Sbjct: 174 IVFVLLVMLTAFRLHNKSK 192

Ricinus communis (taxid: 3988)

>sp|D7MAF6|CSPL9_ARALL CASP-like protein ARALYDRAFT_493323 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493323 PE=3 SV=1

 Score =  139 bits (350), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 116/189 (61%), Gaps = 8/189 (4%)

Query: 8   SNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAE 67
           +NM+G+      +  ES  R   K  ++ +R+L   LT  AA V+GV K+T+++S  L  
Sbjct: 7   NNMNGMEMEKGKR--ESRSR---KGVELTMRVLALVLTMAAATVLGVAKQTKVVSIKLIP 61

Query: 68  TMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIML--D 125
            +P + ++ TAK  ++SAFVY + +NAIA  Y A+S+A  L I+R   +  L + +L  D
Sbjct: 62  ALPPLDITTTAKASYLSAFVYNISANAIACGYTAISIAI-LMISRGRRSKKLLMAVLLGD 120

Query: 126 LITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLF 185
           L+ + LLFS  GAA AIG++GL+GN HV WNKVC VFG FC     +L L+ L +  F+F
Sbjct: 121 LVMVALLFSGTGAASAIGLMGLQGNKHVMWNKVCGVFGKFCHRAAPSLPLTFLAAVVFMF 180

Query: 186 LVAVAILNL 194
           LV +  + L
Sbjct: 181 LVVLDAIKL 189

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|O23413|CSPLN_ARATH CASP-like protein At4g15620 OS=Arabidopsis thaliana GN=At4g15620 PE=2 SV=1

 Score =  139 bits (350), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 117/191 (61%), Gaps = 12/191 (6%)

Query: 8   SNMDGVATVSNVKVVESSKRVM--FKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTL 65
           +NM+G+        +E  KR +   K  ++ +R+L   LT  AA V+GV K+T+++S  L
Sbjct: 7   NNMNGME-------MEKGKRELGSRKGVELTMRVLALILTMAAATVLGVAKQTKVVSIKL 59

Query: 66  AETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIML- 124
             T+P + ++ TAK  ++SAFVY +  NAIA  Y A+S+A  L I+R   +  L +++L 
Sbjct: 60  IPTLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISIAI-LMISRGRRSKKLLMVVLL 118

Query: 125 -DLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAF 183
            DL+ + LLFS  GAA AIG++GL GN HV W KVC VFG FC     +L L++L +  F
Sbjct: 119 GDLVMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVF 178

Query: 184 LFLVAVAILNL 194
           +FLV +  + L
Sbjct: 179 MFLVVLDAIKL 189

Arabidopsis thaliana (taxid: 3702)

>sp|B9HMP6|CSPL7_POPTR CASP-like protein POPTRDRAFT_820934 OS=Populus trichocarpa GN=POPTRDRAFT_820934 PE=3 SV=1

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/150 (49%), Positives = 110/150 (73%), Gaps = 3/150 (2%)

Query: 50  IVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLA 109
           IV+GVDK+T+++   + +T+P++ + V+AKW ++SAF Y + SNAIA SYAALSL   LA
Sbjct: 47  IVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTYSVASNAIACSYAALSL--VLA 104

Query: 110 ITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNF 169
           ++      ++ +I+LDL+ + +LFS+NGAA+AIG++G +GNSHV W KVC+VFG FC   
Sbjct: 105 VSGKKGIMSI-VIVLDLLMVAMLFSSNGAALAIGLMGYQGNSHVRWTKVCHVFGRFCNQV 163

Query: 170 TAALVLSILGSFAFLFLVAVAILNLHKRSQ 199
             ++ LS+LGS  FL LV +  L LHK+S+
Sbjct: 164 AVSISLSLLGSILFLLLVGITSLRLHKKSK 193

Populus trichocarpa (taxid: 3694)

>sp|C5XKI6|CSPL6_SORBI CASP-like protein Sb03g014480 OS=Sorghum bicolor GN=Sb03g014480 PE=2 SV=1

 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 112/166 (67%), Gaps = 7/166 (4%)

Query: 35  VMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNA 94
           V LR+   + T ++A+V+GVD++T+ I  T+ + +P ++V +TA W + SAFVYF+V+NA
Sbjct: 61  VALRVFVVASTLVSAVVMGVDRQTRTIQITITDALPPLEVPLTANWSYSSAFVYFVVANA 120

Query: 95  IASSYAALSLAFTLAITRFHNNAALGLIML-DLITMGLLFSANGAAMAIGMIGLKGNSHV 153
           +   ++A +LA         + AA+  +M+ DL+ + LL+SA GAA   G++G +GNSHV
Sbjct: 121 MVCLFSAAALAAC------RSRAAMVPVMVGDLLALALLYSAVGAAAEFGILGERGNSHV 174

Query: 154 HWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKRSQ 199
            W KVCNV+G FC    AA+++S++G+FA L L+ + IL +HK S 
Sbjct: 175 RWAKVCNVYGRFCDRAMAAVIVSLIGAFANLVLLMLNILTIHKSSS 220

Sorghum bicolor (taxid: 4558)

>sp|Q8L8Z1|CSPLO_ARATH CASP-like protein At4g15630 OS=Arabidopsis thaliana GN=At4g15630 PE=1 SV=2

 Score =  130 bits (326), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 114/189 (60%), Gaps = 8/189 (4%)

Query: 8   SNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAE 67
           + +DG+      K  ES  R   K  ++ +R+L   LT +AA V+GV K+T+++   L  
Sbjct: 7   NKVDGMEMEKGKK--ESGSR---KGLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIP 61

Query: 68  TMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIML--D 125
           T+P + VS TAK  ++SAFVY + +NAIA  Y A+S+   + I++   + +L + +L  D
Sbjct: 62  TLPPLNVSTTAKASYLSAFVYNISANAIACGYTAISIVIVM-ISKGKRSKSLLMAVLIGD 120

Query: 126 LITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLF 185
           L+ + LLFS+ GAA AIG++G  GN HV W KVC VFG FC     ++ ++++ S  F+ 
Sbjct: 121 LMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFML 180

Query: 186 LVAVAILNL 194
           LV +  L L
Sbjct: 181 LVVLDALKL 189

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
225436787	202	PREDICTED: UPF0497 membrane protein 6 [V	0.984	0.970	0.582	4e-47
147794365	202	hypothetical protein VITISV_023954 [Viti	0.984	0.970	0.572	1e-45
449436553	211	PREDICTED: CASP-like protein VIT_07s0104	0.924	0.872	0.516	3e-45
357511151	191	hypothetical protein MTR_7g108130 [Medic	0.924	0.963	0.543	9e-45
388498388	191	unknown [Medicago truncatula]	0.924	0.963	0.543	1e-44
225432374	195	PREDICTED: UPF0497 membrane protein 4 [V	0.894	0.912	0.486	1e-42
358248678	188	CASP-like protein 6 [Glycine max] gi|288	0.884	0.936	0.489	1e-42
356555555	191	PREDICTED: CASP-like protein 6-like [Gly	0.874	0.910	0.508	5e-42
319428661	193	nitrate, fromate, iron dehydrogenase [Ph	0.944	0.974	0.512	2e-40
351723717	187	CASP-like protein 5 [Glycine max] gi|288	0.934	0.994	0.478	2e-39

>gi|225436787|ref|XP_002268702.1| PREDICTED: UPF0497 membrane protein 6 [Vitis vinifera] gi|226713175|sp|A7PTY8.1|CSPL8_VITVI RecName: Full=CASP-like protein VIT_07s0104g01350

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/201 (58%), Positives = 143/201 (71%), Gaps = 5/201 (2%)

Query: 1   MGSQYKPSNMDGV--ATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKET 58
           M SQ +P N+DGV     S+VKVVE  + V   SS+ +LRILG  LT IAA+V GVDK+T
Sbjct: 1   MESQCRP-NVDGVHNGVESHVKVVEKPRSV-GSSSEFVLRILGLLLTLIAAVVAGVDKQT 58

Query: 59  QIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAF-TLAITRFHNNA 117
           +II  TL +T+PS+ V VTAKW  MSAFVY +VSNAIA SYAA+SL   T+   R     
Sbjct: 59  KIIPLTLIKTLPSLHVPVTAKWSDMSAFVYLVVSNAIACSYAAISLVLVTMLGRRGKGGR 118

Query: 118 ALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSI 177
            L +I+LDL  +GLLFSANGAA A+G++G  GNSHV W KVCNVF  FC +  A+L LS 
Sbjct: 119 VLAVIVLDLHMVGLLFSANGAATAVGVLGQYGNSHVEWKKVCNVFDSFCHHLVASLALSF 178

Query: 178 LGSFAFLFLVAVAILNLHKRS 198
           LGS +FL LV +AILNLHK+S
Sbjct: 179 LGSLSFLGLVLLAILNLHKKS 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147794365|emb|CAN69352.1| hypothetical protein VITISV_023954 [Vitis vinifera]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/201 (57%), Positives = 141/201 (70%), Gaps = 5/201 (2%)

Query: 1   MGSQYKPSNMDGV--ATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKET 58
           M SQ +P N+DGV     S+VKVV    R +  SS+ +LRILG  LT IAA+V GVDK+T
Sbjct: 1   MESQCRP-NVDGVHNGVESHVKVV-GKPRSVGSSSEFVLRILGLLLTLIAAVVAGVDKQT 58

Query: 59  QIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAF-TLAITRFHNNA 117
           +II  TL +T+PS+ V VTAKW  MSAFVY +VSNAI  SYAA+SL   T+   R     
Sbjct: 59  KIIPLTLIKTLPSLHVPVTAKWSDMSAFVYLVVSNAIXCSYAAISLVLVTMLGRRGKGGR 118

Query: 118 ALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSI 177
            L +I+LDL  +GLLFSANGAA A+G++G  GNSHV W KVCNVF  FC +  A+L LS 
Sbjct: 119 VLAVIVLDLHMVGLLFSANGAATAVGVLGQYGNSHVEWKKVCNVFDSFCHHLVASLALSF 178

Query: 178 LGSFAFLFLVAVAILNLHKRS 198
           LGS +FL LV +AILNLHK+S
Sbjct: 179 LGSLSFLGLVLLAILNLHKKS 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436553|ref|XP_004136057.1| PREDICTED: CASP-like protein VIT_07s0104g01350-like [Cucumis sativus] gi|449498426|ref|XP_004160534.1| PREDICTED: CASP-like protein VIT_07s0104g01350-like [Cucumis sativus]

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/186 (51%), Positives = 131/186 (70%), Gaps = 2/186 (1%)

Query: 13  VATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSV 72
           V   SNVKV++S +  +    D ++R LG + T IAAIVV VD E++IIS TL + +P +
Sbjct: 25  VGVRSNVKVIQSVRTKLRWPFDGVVRFLGLAFTLIAAIVVAVDNESKIISVTLTKALPPI 84

Query: 73  QVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNA--ALGLIMLDLITMG 130
               +AKWQ+MSAF YF+VSN IA  YAA+SL +++    + ++   ++ LI LDLI +G
Sbjct: 85  HFYASAKWQYMSAFKYFVVSNCIACGYAAVSLVYSMTTKGYKDDPTRSMLLISLDLIMVG 144

Query: 131 LLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVA 190
           LLFSA+GAA AIG+IG  GNSH+HW KVC  F G+C +FTAALV+SI GS  FL LV ++
Sbjct: 145 LLFSADGAAAAIGVIGRDGNSHMHWIKVCGFFEGYCHHFTAALVISIAGSVMFLCLVVLS 204

Query: 191 ILNLHK 196
           +L L+K
Sbjct: 205 VLKLYK 210

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511151|ref|XP_003625864.1| hypothetical protein MTR_7g108130 [Medicago truncatula] gi|355500879|gb|AES82082.1| hypothetical protein MTR_7g108130 [Medicago truncatula]

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/197 (54%), Positives = 138/197 (70%), Gaps = 13/197 (6%)

Query: 1   MGSQYKPSNMDGVATVSNVKVVE-SSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQ 59
           MG+Q K S +DGV   S+VKV+E  +KR      DV+LR+LGF LT  A I+VG  KET+
Sbjct: 1   MGNQSKTS-VDGVH--SDVKVLEMKTKRS--NVLDVLLRVLGFLLTLTATIIVGFGKETK 55

Query: 60  IISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAF-TLAITRFHNNAA 118
           +IS+       S+Q  VTAKW++MSA V+FLV+NAI  SYAA+S+   T+A T  +  A 
Sbjct: 56  VISY------ASLQFKVTAKWEYMSAIVFFLVTNAIGCSYAAISMVVSTIARTSGNKTAL 109

Query: 119 LGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSIL 178
           L + +LDL+ M LLFSANGAA A+G++G KGNSHV W KVCNVF  +CR+ T ALVLSI+
Sbjct: 110 LMITLLDLVIMALLFSANGAAGAVGVLGQKGNSHVQWMKVCNVFDAYCRHMTVALVLSII 169

Query: 179 GSFAFLFLVAVAILNLH 195
           GS  FL LVA ++  LH
Sbjct: 170 GSTVFLLLVAHSLFKLH 186

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498388|gb|AFK37260.1| unknown [Medicago truncatula]

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/197 (54%), Positives = 138/197 (70%), Gaps = 13/197 (6%)

Query: 1   MGSQYKPSNMDGVATVSNVKVVE-SSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQ 59
           MG+Q K S +DGV   S+VKV+E  +KR      DV+LR+LGF LT  A I+VG  KET+
Sbjct: 1   MGNQSKTS-VDGVH--SDVKVLEMKTKRS--NVLDVLLRVLGFLLTLTATIIVGFGKETK 55

Query: 60  IISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAF-TLAITRFHNNAA 118
           +IS+       S+Q  VTAKW++MSA V+FLV+NAI  SYAA+S+   T+A T  +  A 
Sbjct: 56  VISY------ASLQFKVTAKWEYMSAIVFFLVTNAIGCSYAAISMVVSTIARTSGNKTAL 109

Query: 119 LGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSIL 178
           L + +LDL+ M LLFSANGAA A+G++G KGNSHV W KVCNVF  +CR+ T ALVLSI+
Sbjct: 110 LIITLLDLVIMALLFSANGAAGAVGVLGQKGNSHVQWMKVCNVFDAYCRHMTVALVLSII 169

Query: 179 GSFAFLFLVAVAILNLH 195
           GS  FL LVA ++  LH
Sbjct: 170 GSTVFLLLVAHSLFKLH 186

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432374|ref|XP_002276206.1| PREDICTED: UPF0497 membrane protein 4 [Vitis vinifera] gi|226713609|sp|A7NW78.1|CSPL5_VITVI RecName: Full=CASP-like protein VIT_05s0020g01820

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 124/181 (68%), Gaps = 3/181 (1%)

Query: 17  SNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSV 76
             VKVV   K    +  D++LR++  +LT +AA+++GVDK+T+++S  L  T+P + V V
Sbjct: 17  KEVKVVTGGK---LRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPV 73

Query: 77  TAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLIMLDLITMGLLFSAN 136
           TAKW+++SAFVYF+VSNAIA SYAALSL  ++  ++ +    L + ++DL+ + LLFS+N
Sbjct: 74  TAKWRYLSAFVYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSN 133

Query: 137 GAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHK 196
           GAA AIG++G +GNS V W KVCNVFG FC     AL LS  G  AF  LV +A   L+K
Sbjct: 134 GAAGAIGLMGYEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNK 193

Query: 197 R 197
           R
Sbjct: 194 R 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248678|ref|NP_001239666.1| CASP-like protein 6 [Glycine max] gi|288559192|sp|C6TBD0.1|CSPL6_SOYBN RecName: Full=CASP-like protein 6 gi|255637615|gb|ACU19132.1| unknown [Glycine max]

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 10/186 (5%)

Query: 22  VESSKR-VMFKSS-------DVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQ 73
           VES +R VM           D++LR+L F++T +AAIV+ VDK+T+++   L+++ P + 
Sbjct: 4   VESKEREVMVAKPVAVVGVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLN 63

Query: 74  VSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLI-MLDLITMGLL 132
           V +TAKW  MSAFVYFLV+NAIA +YAA+SL   L + R  +     LI +LD   + LL
Sbjct: 64  VPLTAKWHQMSAFVYFLVTNAIACTYAAMSLLLAL-VNRGKSKGLWTLIAVLDTFMVALL 122

Query: 133 FSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAIL 192
           FS NGAA A+G++G KGNSHV+WNKVCNVFG FC    A++ +S++GS AFL LV + ++
Sbjct: 123 FSGNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVV 182

Query: 193 NLHKRS 198
            LH+R+
Sbjct: 183 RLHRRT 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555555|ref|XP_003546096.1| PREDICTED: CASP-like protein 6-like [Glycine max]

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 89/175 (50%), Positives = 119/175 (68%), Gaps = 1/175 (0%)

Query: 10  MDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETM 69
           M+G        VVE S   +  + D++LRIL F LT +AA+V+G DK+T I+   L ++M
Sbjct: 1   MEGSEGKGREFVVEKSASSIVGTCDLVLRILAFLLTLVAAVVIGTDKQTAIVPIKLVDSM 60

Query: 70  PSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLI-MLDLIT 128
           P++ V V AKW ++SAFVY++ +NAIA +YA LSL  TLA  R        LI +LD + 
Sbjct: 61  PTLYVPVAAKWHYLSAFVYYVGANAIACAYAILSLLLTLANRRKGKGTMETLITVLDTVM 120

Query: 129 MGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAF 183
           + LLFS NGAAMA+G++GL+GNSHVHWNKVCN FG FC    A+L +S+LGS AF
Sbjct: 121 VALLFSGNGAAMAVGLLGLQGNSHVHWNKVCNEFGKFCDQVAASLFISLLGSIAF 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|319428661|gb|ADV56684.1| nitrate, fromate, iron dehydrogenase [Phaseolus vulgaris]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/203 (51%), Positives = 138/203 (67%), Gaps = 15/203 (7%)

Query: 1   MGSQYKPSNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQI 60
           M SQ K +N+DGV   S+VKVVES  +   +  D++LR LG SLT +A IVV VD ET++
Sbjct: 1   MSSQTK-TNVDGVH--SDVKVVESPTK--ERPYDLLLRFLGLSLTLVATIVVAVDNETKL 55

Query: 61  ISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAI--TRFHNNAA 118
           IS+        +Q   TAKW+++SA V+F+VSNAIA SYAA SL  T+    +R   +  
Sbjct: 56  ISY------AEMQFKATAKWEYLSAMVFFVVSNAIACSYAAASLVITVMARNSRRRKSDV 109

Query: 119 LGLIM--LDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLS 176
            GL++  LD++ M LLFSANGAA A+G+I  KGN+H  W KVC+VF  +CR+ TAALVLS
Sbjct: 110 TGLVVTALDVVLMALLFSANGAACAVGVIAQKGNTHAQWMKVCDVFDAYCRHVTAALVLS 169

Query: 177 ILGSFAFLFLVAVAILNLHKRSQ 199
           I+GS  FL LV  ++L LH RS+
Sbjct: 170 IIGSTVFLLLVLHSVLKLHYRSR 192

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723717|ref|NP_001236009.1| CASP-like protein 5 [Glycine max] gi|288559186|sp|C6SZP8.1|CSPL5_SOYBN RecName: Full=CASP-like protein 5 gi|255628753|gb|ACU14721.1| unknown [Glycine max]

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 4/190 (2%)

Query: 10  MDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETM 69
           M+GV   S  + V  +K V    SD++LR+L F++T +AAIV+ VDK+T+++   L++++
Sbjct: 1   MEGVE--SKEREVMVAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSL 58

Query: 70  PSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITRFHNNAALGLI-MLDLIT 128
           P + V +TAKW  MSA VYFLV+NAIA +YA LSL     + R  +     LI +LD   
Sbjct: 59  PPLDVPLTAKWHQMSAIVYFLVTNAIACTYAVLSLL-LALVNRGKSKGLWTLIAVLDAFM 117

Query: 129 MGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVA 188
           + LLFS NGAA A+G++G KGNSHV+WNKVCNVFG FC    A++ +S++GS AFL LV 
Sbjct: 118 VALLFSGNGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVI 177

Query: 189 VAILNLHKRS 198
           +  + LH+R+
Sbjct: 178 IPGVRLHRRN 187

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
TAIR|locus:2130494	190	AT4G15620 "AT4G15620" [Arabido	0.909	0.952	0.322	2.1e-22
TAIR|locus:2130509	190	AT4G15630 "AT4G15630" [Arabido	0.909	0.952	0.312	8e-21
TAIR|locus:2081091	199	AT3G06390 "AT3G06390" [Arabido	0.793	0.793	0.301	8.8e-15
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.798	0.823	0.254	7.9e-14
TAIR|locus:2128649	197	AT4G20390 "AT4G20390" [Arabido	0.788	0.796	0.275	1e-13
TAIR|locus:2163386	197	AT5G44550 [Arabidopsis thalian	0.819	0.827	0.279	1e-13
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.879	0.935	0.229	4.7e-09
TAIR|locus:2053514	206	CASP1 "AT2G36100" [Arabidopsis	0.788	0.762	0.25	2e-08
TAIR|locus:2038638	221	CASP3 "AT2G27370" [Arabidopsis	0.396	0.357	0.337	1.4e-05
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.728	0.884	0.256	0.00015

TAIR|locus:2130494 AT4G15620 "AT4G15620" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 61/189 (32%), Positives = 96/189 (50%)

Query:     8 SNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAE 67
             +NM+G+      + + S K V     ++ +R+L   LT  AA V+GV K+T+++S  L  
Sbjct:     7 NNMNGMEMEKGKRELGSRKGV-----ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIP 61

Query:    68 TMPSVQVSVTAKWQFMSAFVYFLVXXXXXXXXXXXXXXXXXXITRFHNNAALGLIML--D 125
             T+P + ++ TAK  ++SAFVY  +                  I+R   +  L +++L  D
Sbjct:    62 TLPPLDITTTAKASYLSAFVYN-ISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLGD 120

Query:   126 LITMGLLFSANXXXXXXXXXXLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLF 185
             L+ + LLFS            L GN HV W KVC VFG FC     +L L++L +  F+F
Sbjct:   121 LVMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMF 180

Query:   186 LVAVAILNL 194
             LV +  + L
Sbjct:   181 LVVLDAIKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130509 AT4G15630 "AT4G15630" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 59/189 (31%), Positives = 94/189 (49%)

Query:     8 SNMDGVATVSNVKVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAE 67
             + +DG+      K  ES  R   K  ++ +R+L   LT +AA V+GV K+T+++   L  
Sbjct:     7 NKVDGMEMEKGKK--ESGSR---KGLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIP 61

Query:    68 TMPSVQVSVTAKWQFMSAFVYFLVXXXXXXXXXXXXXXXXXXITRFHNNAALGLIML--D 125
             T+P + VS TAK  ++SAFVY  +                  I++   + +L + +L  D
Sbjct:    62 TLPPLNVSTTAKASYLSAFVYN-ISANAIACGYTAISIVIVMISKGKRSKSLLMAVLIGD 120

Query:   126 LITMGLLFSANXXXXXXXXXXLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLF 185
             L+ + LLFS+             GN HV W KVC VFG FC     ++ ++++ S  F+ 
Sbjct:   121 LMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFML 180

Query:   186 LVAVAILNL 194
             LV +  L L
Sbjct:   181 LVVLDALKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2081091 AT3G06390 "AT3G06390" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 51/169 (30%), Positives = 81/169 (47%)

Query:    34 DVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVXX 93
             D++ R+L FS T  A IV+    +T++       + P+    V+A++    AF+YF+V  
Sbjct:    38 DIITRVLLFSATLTALIVMVTSDQTEMTQLP-GVSSPA---PVSAEFNDSPAFIYFVVAL 93

Query:    94 XXXXXXXXXXXXXXXXIT---RFHNNAALGLIMLDLITMGLLFSANXXXXXXXXXXLKGN 150
                             +     F    ++ L  LD++ +G+L SA           LKGN
Sbjct:    94 VVASFYALISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIALKGN 153

Query:   151 SHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILN-LHKRS 198
               V WNK+CNV+  FCR    +L LS+   FA L L+ ++I + L KR+
Sbjct:   154 EEVGWNKICNVYDKFCRYIATSLALSL---FASLLLLVLSIWSALSKRT 199

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 43/169 (25%), Positives = 82/169 (48%)

Query:    33 SDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSV-TAKWQFMSAFVYFLV 91
             + V+LR + F+ T  + +V+   K+T+ I F     +P   + +  A++    A +YF+V
Sbjct:    29 TQVVLRFVLFAATLTSIVVMVTSKQTKNI-F-----LPGTPIRIPAAEFTNSPALIYFVV 82

Query:    92 XXXXXXXXXXXXXXXXXXITRFHNNAA---LGLIMLDLITMGLLFSANXXXXXXXXXXLK 148
                                 + H+ +A   L L ++D + +G++ SA           LK
Sbjct:    83 ALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLK 142

Query:   149 GNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHKR 197
             GN  V W K+C+++  FCR+   A+ +S+  S   L L  +++L+L+K+
Sbjct:   143 GNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKK 191

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2128649 AT4G20390 "AT4G20390" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 44/160 (27%), Positives = 73/160 (45%)

Query:    37 LRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVXXXXX 96
             LRI  F  T  AAIV+ ++KET+ +      T+P ++ ++TAK+Q   AFV+F++     
Sbjct:    22 LRIFAFMATLAAAIVMSLNKETKTLVVATIGTVP-IKATLTAKFQHTPAFVFFVIANVMV 80

Query:    97 XXXXXXXXXXXXXITRFHNNAA--LGLIMLDLITMGLLFSANXXXXXXXXXXLKGNSHVH 154
                            +        L + +LD++   L+ +A             GN H  
Sbjct:    81 SFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAK 140

Query:   155 WNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNL 194
             WNKVC+ F  +C +   A++ +  G    L + AV+I  L
Sbjct:   141 WNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSISRL 180

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2163386 AT5G44550 [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 47/168 (27%), Positives = 76/168 (45%)

Query:    31 KSSDVML--RILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVY 88
             KS  ++L  R+L FS T  AAIV+G++KET+          P +Q + TAK+    AFV+
Sbjct:    14 KSCKILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTP-IQATFTAKFDHTPAFVF 72

Query:    89 FLVXXXXXXXXXXXXXXXXXXITR--FHNNAALGLIMLDLITMGLLFSANXXXXXXXXXX 146
             F+V                    +  F     L + +LD++ + L+ +A           
Sbjct:    73 FVVANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVG 132

Query:   147 LKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNL 194
               GN H  W+K+C+ F  +C +   AL+ +  G    L + A +I  L
Sbjct:   133 KNGNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRL 180

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 42/183 (22%), Positives = 78/183 (42%)

Query:    20 KVVESSKRVMFKSSDVMLRILGFSLTFIAAIVVGVDK-ETQIISFTLAETMPSVQ--VSV 76
             +++E+SK +  + S +M R +   L FI  IV   +   + I+  T  ET+P     +  
Sbjct:     7 EIMETSKGI--QKSGLMSRRIAI-LEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRF 63

Query:    77 TAKWQFMSAFVYFLVXXXXXXXXXXXXXXXXXX--ITRFHNNAALGLIMLDLITMGLLFS 134
              A++  + A  +F+V                    + R   N  + LI+LD+  +GLL S
Sbjct:    64 QAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTS 123

Query:   135 ANXXXXXXXXXXLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNL 194
                           GN+  +W  +C  F  FC   + +L+ S +     + L+ ++ + L
Sbjct:   124 GASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIAL 183

Query:   195 HKR 197
              +R
Sbjct:   184 SRR 186

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2053514 CASP1 "AT2G36100" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 41/164 (25%), Positives = 68/164 (41%)

Query:    37 LRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQ--VSVTAKWQFMSAFVYFLVXXX 94
             L I  F L  +AAI V +   +  + +T  ET+P     +   A +  + AF YF++   
Sbjct:    45 LAIFDFLLR-LAAIAVTIGAAS--VMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVA 101

Query:    95 XXXXXXXXXX-XXXXXITRFHNNAA-LGLIMLDLITMGLLFSANXXXXXXXXXXLKGNSH 152
                             I R H  A  L L++ D + + L  SA             GN  
Sbjct:   102 VVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQS 161

Query:   153 VHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLHK 196
              +W  +C  FG FC+N + A+V   +    F+ L+ ++ + L +
Sbjct:   162 TNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIALKR 205

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2038638 CASP3 "AT2G27370" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query:   119 LGLIMLDLITMGLLFSANXXXXXXXXXXLKGNSHVHWNKVCNVFGGFCRNFTAALVLSIL 178
             L LI+ D + MGL   A             GNS  +W  VC  FG FC+  + A+V S +
Sbjct:   142 LFLILCDTVMMGLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFI 201

Query:   179 GSFAFLFLVAVAILNLHKRS 198
              +   +FLV ++   L KR+
Sbjct:   202 AATLLMFLVILSAFAL-KRT 220

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 41/160 (25%), Positives = 64/160 (40%)

Query:    38 RILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVXXXXXX 97
             RI G  L  +AA   G      I+  T  E    + +S+ AK+  M+AF YF++      
Sbjct:     7 RIGGLVLR-LAAF--GAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVS 63

Query:    98 XXXXXXXXX--XXXITRFHNNAALGLIMLDLITMGLLFSANXXXXXXXXXXLKGNSHVHW 155
                           + +F       +++LDL+   LL S+            KGN++  W
Sbjct:    64 VYSFLVLFLPKESLLWKF-------VVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGW 116

Query:   156 NKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNLH 195
               +C     FC   T AL   I G  A +  V + + +LH
Sbjct:   117 LPICGQVPKFCDQITGAL---IAGFVALVLYVLLLLYSLH 153

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A7PTY8	CSPL8_VITVI	No assigned EC number	0.5820	0.9849	0.9702	yes	no
O23413	CSPLN_ARATH	No assigned EC number	0.4083	0.8994	0.9421	yes	no
C6TBD0	CSPL6_SOYBN	No assigned EC number	0.4892	0.8844	0.9361	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	199
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	2e-27
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	1e-26

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score =  100 bits (252), Expect = 2e-27
 Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 10/162 (6%)

Query: 35  VMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNA 94
           ++LR+L FS T  AAIV+G ++ET+++            ++  AK+  + AFVYF+V+NA
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVF--------VQLITFKAKFSDLPAFVYFVVANA 52

Query: 95  IASSYAALSLAFT--LAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSH 152
           IA  Y+ LSL  +    + R      + L  LDL+ + LL S   AA A+  +G  GN  
Sbjct: 53  IACGYSLLSLVVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKE 112

Query: 153 VHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAILNL 194
             W K+C VFG FC     +L LS+      + L  ++ ++L
Sbjct: 113 AGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score = 98.9 bits (247), Expect = 1e-26
 Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 14/157 (8%)

Query: 30  FKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYF 89
            + ++++LR+  F L   AA+V+G +K+T+   F          +   A +  + AF Y 
Sbjct: 4   LRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFF----------IQKKASFSDLPAFRYL 53

Query: 90  LVSNAIASSYAALSLAFT----LAITRFHNNAALGLIMLDLITMGLLFSANGAAMAIGMI 145
           +V+NAIA+ Y+ L L  +              A  L +LD +   LL +A  AA AI  +
Sbjct: 54  VVANAIAAGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYL 113

Query: 146 GLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFA 182
              GNSH +W K+CN FG FC    A++ LS L    
Sbjct: 114 ARNGNSHANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	199
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.6

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=7.3e-44  Score=286.51  Aligned_cols=152  Identities=36%  Similarity=0.633  Sum_probs=139.9

Q ss_pred             hhHHHHHHHHHHHHHHHHhhccceeEEEeeecccCCceeeeEEEEeeeechhHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 036940           35 VMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAITR-F  113 (199)
Q Consensus        35 l~LR~~a~~~s~~a~~vM~t~~qt~~~~~~~~~~~~~~~~~~~~~f~~~~af~ylv~an~i~~~Ysllql~~~~~~~~-~  113 (199)
                      ++||+++++++++|+++|+||+||.++..        ..++.++||+|+++|+|+|++|+|+|+|+++|+++++.+.. +
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~--------~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~   72 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFV--------QLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKR   72 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeec--------ccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            47999999999999999999999998731        12778999999999999999999999999999999886542 2


Q ss_pred             C-CchhhHHHhHHHHHHHHHHHHHhHHHHHHHHHhcCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036940          114 H-NNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVAVAIL  192 (199)
Q Consensus       114 ~-~~~~~~~f~~Dqv~ayLl~SaaaAA~ai~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~lsflA~~~~~~~s~lS~~  192 (199)
                      + ....|++|++||+++||++||++||+++++++|+||+|.+|+|+|+.+++||+|+++|++++|+|++++++++++|++
T Consensus        73 ~~~~~~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~  152 (154)
T TIGR01569        73 RVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAI  152 (154)
T ss_pred             cchhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2 235899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hh
Q 036940          193 NL  194 (199)
Q Consensus       193 ~L  194 (199)
                      ++
T Consensus       153 ~~  154 (154)
T TIGR01569       153 SL  154 (154)
T ss_pred             cC
Confidence            75

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=2.2e-38  Score=252.56  Aligned_cols=143  Identities=37%  Similarity=0.606  Sum_probs=132.3

Q ss_pred             cchhhhhHHHHHHHHHHHHHHHHhhccceeEEEeeecccCCceeeeEEEEeeeechhHHHHHHHHHHHHHHHHHHHHHHH
Q 036940           30 FKSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLA  109 (199)
Q Consensus        30 ~~~~~l~LR~~a~~~s~~a~~vM~t~~qt~~~~~~~~~~~~~~~~~~~~~f~~~~af~ylv~an~i~~~Ysllql~~~~~  109 (199)
                      .+..+++||+++++++++|+++|++|+||.++          ..++.+++|+|+++|+|++++|+|+|+|+++|++++++
T Consensus         3 ~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~----------~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~   72 (149)
T PF04535_consen    3 LRIASLVLRLLAFVLSLAALAVMATNKQTVSV----------FSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIY   72 (149)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhcCCccee----------eccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999888          35778999999999999999999999999999999886


Q ss_pred             Hhc---CCC-chhhHHHhHHHHHHHHHHHHHhHHHHHHHHHhcCCcccccccccccccchhhhHHHHHHHHHHHHHH
Q 036940          110 ITR---FHN-NAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFA  182 (199)
Q Consensus       110 ~~~---~~~-~~~~~~f~~Dqv~ayLl~SaaaAA~ai~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~lsflA~~~  182 (199)
                      ...   .++ ...|++|++||+++||++|+++||+++++++++||++.+|.++|+.+++||+|+++|++++|+|+++
T Consensus        73 ~~~~~~~~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   73 SLSRGKLRSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             HHHccCCcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            532   223 3589999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.60  E-value=1.8e-06  Score=66.58  Aligned_cols=139  Identities=19%  Similarity=0.075  Sum_probs=99.5

Q ss_pred             chhhhhHHHHHHHHHHHHHHHHhhccceeEEEeeecccCCceeeeEEEEeeeechhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036940           31 KSSDVMLRILGFSLTFIAAIVVGVDKETQIISFTLAETMPSVQVSVTAKWQFMSAFVYFLVSNAIASSYAALSLAFTLAI  110 (199)
Q Consensus        31 ~~~~l~LR~~a~~~s~~a~~vM~t~~qt~~~~~~~~~~~~~~~~~~~~~f~~~~af~ylv~an~i~~~Ysllql~~~~~~  110 (199)
                      +....+||+++++++++.+.+++....+...                ......++..|.+.+.++...|++..++..+..
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~   66 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGSQ----------------IYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS   66 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhcccc----------------ccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3457899999999999999999987542211                234455678899999999999998888887754


Q ss_pred             hc--CCCchhhHHHhHHHHHHHHHHHHHhHHHHHHHHHhcCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 036940          111 TR--FHNNAALGLIMLDLITMGLLFSANGAAMAIGMIGLKGNSHVHWNKVCNVFGGFCRNFTAALVLSILGSFAFLFLVA  188 (199)
Q Consensus       111 ~~--~~~~~~~~~f~~Dqv~ayLl~SaaaAA~ai~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~lsflA~~~~~~~s~  188 (199)
                      .+  ++....+.+++.|.+++.+-+.+..+-+.-...-+.+++   +...+...++-|+...++.++++++++++..+.+
T Consensus        67 ~~~~~~~~~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   67 LKYRPRIPWPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             HhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            21  212345689999999999998876665543211111111   2233445567899999999999999999988764

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00