Citrus Sinensis ID: 036972
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 275 | ||||||
| 158828372 | 456 | alcohol acyl transferase [Citrus sinensi | 1.0 | 0.603 | 0.92 | 1e-147 | |
| 147781738 | 451 | hypothetical protein VITISV_009219 [Viti | 0.916 | 0.558 | 0.536 | 6e-84 | |
| 225427474 | 451 | PREDICTED: benzyl alcohol O-benzoyltrans | 0.916 | 0.558 | 0.532 | 1e-83 | |
| 147833225 | 451 | hypothetical protein VITISV_040970 [Viti | 0.916 | 0.558 | 0.528 | 1e-82 | |
| 225427532 | 451 | PREDICTED: benzyl alcohol O-benzoyltrans | 0.916 | 0.558 | 0.532 | 1e-82 | |
| 147801410 | 451 | hypothetical protein VITISV_042062 [Viti | 0.916 | 0.558 | 0.532 | 2e-82 | |
| 225427540 | 451 | PREDICTED: benzyl alcohol O-benzoyltrans | 0.916 | 0.558 | 0.521 | 5e-82 | |
| 296088451 | 475 | unnamed protein product [Vitis vinifera] | 0.916 | 0.530 | 0.521 | 7e-82 | |
| 225427534 | 451 | PREDICTED: benzyl alcohol O-benzoyltrans | 0.916 | 0.558 | 0.525 | 9e-82 | |
| 147800115 | 451 | hypothetical protein VITISV_012041 [Viti | 0.916 | 0.558 | 0.521 | 3e-81 |
| >gi|158828372|gb|ABW81204.1| alcohol acyl transferase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/275 (92%), Positives = 258/275 (93%)
Query: 1 MEDMARGERSPTVFPIWQRQILNARNPPQVTCIHHEYDEINTNEVPSDNMAHKSFFFSLK 60
+EDMARGERSPT+FPIWQR ILNARNPPQVTCIHHEYDEINTNEVPSDNMAHKSFFFSLK
Sbjct: 182 IEDMARGERSPTLFPIWQRLILNARNPPQVTCIHHEYDEINTNEVPSDNMAHKSFFFSLK 241
Query: 61 GIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIP 120
GIKALRNQLPF LKDCSTFELLLAFLWKCRTIALKLQPEEIAKV CIVNVRGK Y+MDIP
Sbjct: 242 GIKALRNQLPFQLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVCCIVNVRGKSYEMDIP 301
Query: 121 PGYYGNAFTFSAVCSTAEQLCKNPIGYAVELVKKAKAQMNEEYIRSVADLMVIKGRRIKS 180
PGYYGNAFTFSAVCS AEQLCKNPIGYAVELVKKAKAQMNEEYIRS ADLMVIKGRRIK
Sbjct: 302 PGYYGNAFTFSAVCSKAEQLCKNPIGYAVELVKKAKAQMNEEYIRSAADLMVIKGRRIKF 361
Query: 181 STRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAGAVAVFSFCVKYQSKNGEPGILVPICLP 240
STRGNFIVSDLRNVGLGDVDFGWGKPIY G AGAVAV SF KYQ+KNGEPGILVPICLP
Sbjct: 362 STRGNFIVSDLRNVGLGDVDFGWGKPIYAGTAGAVAVISFFTKYQNKNGEPGILVPICLP 421
Query: 241 QSAMERFQEELKRLMIQGSMEDLWNTNQTQVFSKL 275
QSAMER QEELK LMIQGS EDL N NQTQ+FSKL
Sbjct: 422 QSAMERLQEELKGLMIQGSAEDLCNINQTQIFSKL 456
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147781738|emb|CAN69948.1| hypothetical protein VITISV_009219 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225427474|ref|XP_002270962.1| PREDICTED: benzyl alcohol O-benzoyltransferase [Vitis vinifera] gi|296088449|emb|CBI37440.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147833225|emb|CAN77583.1| hypothetical protein VITISV_040970 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225427532|ref|XP_002265841.1| PREDICTED: benzyl alcohol O-benzoyltransferase [Vitis vinifera] gi|296088455|emb|CBI37446.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147801410|emb|CAN74729.1| hypothetical protein VITISV_042062 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225427540|ref|XP_002266420.1| PREDICTED: benzyl alcohol O-benzoyltransferase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296088451|emb|CBI37442.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225427534|ref|XP_002266114.1| PREDICTED: benzyl alcohol O-benzoyltransferase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147800115|emb|CAN68818.1| hypothetical protein VITISV_012041 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 275 | ||||||
| TAIR|locus:2151376 | 461 | AT5G17540 [Arabidopsis thalian | 0.905 | 0.540 | 0.446 | 4e-51 | |
| UNIPROTKB|Q5H873 | 453 | HMT/HLT "13-hydroxylupanine O- | 0.923 | 0.560 | 0.432 | 5.1e-51 | |
| TAIR|locus:2099704 | 454 | CHAT "acetyl CoA:(Z)-3-hexen-1 | 0.912 | 0.552 | 0.390 | 1.6e-45 | |
| TAIR|locus:2162976 | 457 | RWP1 "REDUCED LEVELS OF WALL-B | 0.883 | 0.531 | 0.310 | 5.2e-26 | |
| TAIR|locus:2114510 | 430 | DCF "DEFICIENT IN CUTIN FERULA | 0.890 | 0.569 | 0.287 | 2.4e-24 | |
| TAIR|locus:2196909 | 442 | AT1G27620 [Arabidopsis thalian | 0.825 | 0.513 | 0.282 | 2e-22 | |
| UNIPROTKB|A0PDV5 | 430 | cbhct1 "Hydroxycinnamoyl trans | 0.872 | 0.558 | 0.290 | 4.8e-22 | |
| TAIR|locus:2075626 | 468 | AT3G47170 [Arabidopsis thalian | 0.676 | 0.397 | 0.323 | 8e-22 | |
| TAIR|locus:2160549 | 426 | FACT "FATTY ALCOHOL:CAFFEOYL-C | 0.865 | 0.558 | 0.278 | 1.7e-21 | |
| TAIR|locus:2020838 | 461 | AT1G03390 [Arabidopsis thalian | 0.836 | 0.498 | 0.274 | 3.1e-21 |
| TAIR|locus:2151376 AT5G17540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 117/262 (44%), Positives = 165/262 (62%)
Query: 1 MEDMARGERSPTVFPIWQRQILNARNPPQVTCIHHEYDEINT--NEVPS--DNMAHKSFF 56
M + RG +PTV P+W+R +L+AR +VT H EYDE+ E+ S DN+ +S F
Sbjct: 179 MCEFVRGYHAPTVAPVWERHLLSARVLLRVTHAHREYDEMPAIGTELGSRRDNLVGRSLF 238
Query: 57 FSLKGIKALRNQLPFHLKDCST-FELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRY 115
F + A+R LP +L + ST E+L +FLW+ RTIAL+ ++ ++ IVN R K
Sbjct: 239 FGPCEMSAIRRLLPPNLVNSSTNMEMLTSFLWRYRTIALRPDQDKEMRLILIVNARSKLK 298
Query: 116 KMDIPPGYYGNAFTFSAVCSTAEQLCKNPIGYAVELVKKAKAQMNEEYIRSVADLMVIKG 175
+P GYYGNAF F +TA +L K P+ +A+ L+K+AK+ + EEY+RS+ADLMVIKG
Sbjct: 299 NPPLPRGYYGNAFAFPVAIATANELTKKPLEFALRLIKEAKSSVTEEYMRSLADLMVIKG 358
Query: 176 RRIKSSTRGNFIVSDLRNVGLGDVDFG-WGKPIYXXXXXXXXX----FSFCVKYQSKNGE 230
R SS G ++VSD+R D+DFG WGKP+Y SF V ++ +NGE
Sbjct: 359 RPSFSSD-GAYLVSDVRI--FADIDFGIWGKPVYGGIGTAGVEDLPGASFYVSFEKRNGE 415
Query: 231 PGILVPICLPQSAMERFQEELK 252
GI+VP+CLP+ AM+RF EEL+
Sbjct: 416 IGIVVPVCLPEKAMQRFVEELE 437
|
|
| UNIPROTKB|Q5H873 HMT/HLT "13-hydroxylupanine O-tigloyltransferase" [Lupinus albus (taxid:3870)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099704 CHAT "acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2162976 RWP1 "REDUCED LEVELS OF WALL-BOUND PHENOLICS 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2114510 DCF "DEFICIENT IN CUTIN FERULATE" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2196909 AT1G27620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A0PDV5 cbhct1 "Hydroxycinnamoyl transferase" [Solenostemon scutellarioides (taxid:4142)] | Back alignment and assigned GO terms |
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| TAIR|locus:2075626 AT3G47170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2160549 FACT "FATTY ALCOHOL:CAFFEOYL-CoA CAFFEOYL TRANSFERASE" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020838 AT1G03390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 275 | |||
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 3e-59 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 8e-45 | |
| PLN02663 | 431 | PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate | 2e-21 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 2e-19 | |
| PLN00140 | 444 | PLN00140, PLN00140, alcohol acetyltransferase fami | 1e-08 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 3e-59
Identities = 91/260 (35%), Positives = 139/260 (53%), Gaps = 13/260 (5%)
Query: 3 DMARGERSPTVFPIWQRQILNARNPPQVTCIHHEYDEINTNEV-PSDNMAHKSFFF---S 58
++ARG + P+V P+++R++L RNPPQV HHE+D + D + KSF F S
Sbjct: 172 ELARGGKKPSVTPVFRRELLLPRNPPQVKFDHHEFDIFPPEPITTLDEVVSKSFVFEKLS 231
Query: 59 LKGIKALRNQL--PFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYK 116
+ ++ L+ + + K + FE++ A LW+C T A KL PEE + VN+R R
Sbjct: 232 ISALEKLKTKANSSSNGKPRTRFEVVTALLWRCATKARKLDPEEETVLGQAVNIR-SRLN 290
Query: 117 MDIPPGYYGNAFTFSAVCSTAEQLCKNPIGYAVELVKKAKAQMN-----EEYIRSVADLM 171
+PPGY+GNA+ STA +L NP+G+ ELVK+AK ++ E I V + +
Sbjct: 291 PPLPPGYFGNAYFSVVAKSTAAELESNPLGWIAELVKEAKKKVIDDEYLESVIDWVENSL 350
Query: 172 VIKGRRIKSSTRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAGAVAVFSFCVKYQSKNGEP 231
+KG + F+VS +VDFGWGKP+Y G + S +
Sbjct: 351 PLKGFYEGTKDDPAFLVSSWCRFPFYEVDFGWGKPVYVG-PVVPPFGDIVLLIPSPGDDG 409
Query: 232 GILVPICLPQSAMERFQEEL 251
G+ V +CLP+ AM +F++E
Sbjct: 410 GVEVAVCLPEEAMSKFEKEF 429
|
This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432 |
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 275 | |||
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 98.4 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 97.43 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 93.83 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 93.05 |
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-49 Score=370.92 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=209.2
Q ss_pred CcccccCCCCCCCCCCCCCcccCCCCCCC--CCCCCccccccCC-------CCCCCCCceEEEEEeCHhhHHHHHhhCCC
Q 036972 1 MEDMARGERSPTVFPIWQRQILNARNPPQ--VTCIHHEYDEINT-------NEVPSDNMAHKSFFFSLKGIKALRNQLPF 71 (275)
Q Consensus 1 wa~~~Rg~~~~~~~P~~dR~~~~~r~pp~--~~~~~~~~~~~~~-------~~~~~~~~~~~~f~fs~~~i~~Lk~~a~~ 71 (275)
||++|||.. ...+|+|||+++.+++||. ..++|.+|...+. ......++..++|+|++++|++||+++.+
T Consensus 169 WA~~~rg~~-~~~~P~~dR~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~ 247 (447)
T PLN03157 169 WARIARGEP-LGTVPFLDRKVLRAGEPPLSAPVFDHAEFSHPPLLIGEQDNVEERKKKTTVAMLKLSKDQVEKLKDKANE 247 (447)
T ss_pred HHHHhcCCC-CCCCCccCcccccCCCCCCcCCccChhhcccCcccccccccccccccCceEEEEEECHHHHHHHHHhCcc
Confidence 999999975 4678999999999888874 3456555432110 01113467889999999999999999875
Q ss_pred C-----CCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCcccceeccccccchhhhhcCcHH
Q 036972 72 H-----LKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFTFSAVCSTAEQLCKNPIG 146 (275)
Q Consensus 72 ~-----~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~~~~~~~~~~~l~~~~l~ 146 (275)
+ ..++|++|+|+||+|+|++|||+..+++++.+.++||+|+|+ +||+|++|+||++..+.+..+++++.+.+|+
T Consensus 248 ~~~~~~~~~~St~dalsA~lWr~~~rAr~~~~~~~~~l~~~vd~R~rl-~Pplp~~Y~GN~v~~~~~~~~~~el~~~~l~ 326 (447)
T PLN03157 248 SRSSDNGRPYTRYETVAGHVWRSACKARGHEPEQPTALGICVDSRSRM-QPPLPDGYFGNATLDVIAESTSGELVSKPLG 326 (447)
T ss_pred cccccCCCCccHHHHHHHHHHHHHHHHccCCCCCceEEEEEecCCCCC-CCCCCCCcccceeeeccchhhHHHHhhCCHH
Confidence 3 236999999999999999999998888899999999999999 9999999999999999988889999999999
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhcc-cc------cc------CCCCcEEEecCCCCCCCcccccCCccceeeecc
Q 036972 147 YAVELVKKAKAQMNEEYIRSVADLMVIKGR-RI------KS------STRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAG 213 (275)
Q Consensus 147 ~~A~~IR~ai~~~~~e~v~~~~~~~~~~~~-~~------~~------~~~~~~~vssw~~~~~y~~DFG~GkP~~~~~~~ 213 (275)
++|..||+++++++++|++++++|++.... .. .+ ....++.+|||+|+++|++|||||+|.++++..
T Consensus 327 ~~a~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFGwGkp~~~~p~~ 406 (447)
T PLN03157 327 YASSKIREAIEKVTNEYVQSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNPNLGVVSWLTLPIYGLDFGWGKEIYMGPGT 406 (447)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhhCccchhhhcccccccccccccCCCceEEeecccCCccccccCCCccceecccc
Confidence 999999999999999999999999864221 00 00 023568999999999999999999999998865
Q ss_pred c-cceEEEEEecCCCCCCCcEEEEEecCHHHHHHHHHHHHHH
Q 036972 214 A-VAVFSFCVKYQSKNGEPGILVPICLPQSAMERFQEELKRL 254 (275)
Q Consensus 214 ~-~~~~~~ilp~~~~~G~~g~ev~v~L~~~~m~~l~~d~~~l 254 (275)
. ..|.++++|+++++| |++|.|+|++++|++|++.+.++
T Consensus 407 ~~~~g~~~l~~~~~~~g--~iev~v~L~~~~M~~f~~~~~~~ 446 (447)
T PLN03157 407 HDFDGDSLLLPGQNEDG--SVILALCLQVAHMEAFKKFFYED 446 (447)
T ss_pred cCCCceEEEeecCCCCC--cEEEEEEcCHHHHHHHHHHHHhh
Confidence 3 678888999887666 89999999999999999988765
|
|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 275 | ||||
| 4g2m_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 6e-19 | ||
| 4g22_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 6e-19 | ||
| 4g0b_A | 436 | Structure Of Native Hct From Coffea Canephora Lengt | 6e-19 | ||
| 2bgh_A | 421 | Crystal Structure Of Vinorine Synthase Length = 421 | 2e-06 | ||
| 2xr7_A | 453 | Crystal Structure Of Nicotiana Tabacum Malonyltrans | 1e-04 |
| >pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 | Back alignment and structure |
|
| >pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 | Back alignment and structure |
| >pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 | Back alignment and structure |
| >pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 | Back alignment and structure |
| >pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase (Ntmat1) Complexed With Malonyl-Coa Length = 453 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 275 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 3e-77 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 3e-62 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 1e-60 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 6e-60 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 7e-47 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
Score = 239 bits (613), Expect = 3e-77
Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 21/269 (7%)
Query: 3 DMARGERSPTVFPIWQRQILNARNPPQVTCIHHEYDEI--------NTNEVPSDNMAHKS 54
DMARG T+ P R +L AR+PPQ H EY A
Sbjct: 175 DMARGL-DVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSI 233
Query: 55 FFFSLKGIKALRNQLPFHLKD--CSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRG 112
F + + I AL+ + S++E+L +W+C A L+ ++ K+ + R
Sbjct: 234 FKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRA 293
Query: 113 KRYKMDIPPGYYGNAFTFSAVCSTAEQLCKNPIGYAVELVKKAKAQMNEEYIRSVADLMV 172
R + +PPGY+GN + + A L P+ YA + A A+M+ +Y+RS D +
Sbjct: 294 -RLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLE 352
Query: 173 IKGRRIKSSTRG-------NFIVSDLRNVGLGDVDFGWGKPIYGGAAGAVAVFSFCVKYQ 225
++ +K+ RG N ++ + + D DFGWG+PI+ G G +A
Sbjct: 353 LQ-PDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGG-IAYEGLSFILP 410
Query: 226 SKNGEPGILVPICLPQSAMERFQEELKRL 254
S + + V I L M+ FQ L +
Sbjct: 411 SPTNDGSMSVAISLQGEHMKLFQSFLYDI 439
|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 275 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 92.88 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 92.79 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 80.32 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-52 Score=391.49 Aligned_cols=248 Identities=29% Similarity=0.467 Sum_probs=213.8
Q ss_pred CcccccCCCCCCCCCCCCCcccCCCCCCCCCCCCccccccCCC--C-----CCC-CCceEEEEEeCHhhHHHHHhhCCCC
Q 036972 1 MEDMARGERSPTVFPIWQRQILNARNPPQVTCIHHEYDEINTN--E-----VPS-DNMAHKSFFFSLKGIKALRNQLPFH 72 (275)
Q Consensus 1 wa~~~Rg~~~~~~~P~~dR~~~~~r~pp~~~~~~~~~~~~~~~--~-----~~~-~~~~~~~f~fs~~~i~~Lk~~a~~~ 72 (275)
||++|||... +.+|+|||+++.+|+||.+.++|.+|.+.+.. . ..+ .++++++|+|++++|++||+++.++
T Consensus 173 wa~~~rg~~~-~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~ 251 (439)
T 4g22_A 173 WSDMARGLDV-TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALKAKSKED 251 (439)
T ss_dssp HHHHHTTCCC-SSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHHHHGGGGG
T ss_pred HHHHhCCCCC-CCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHHHHHhhcc
Confidence 8999999753 67899999999999999988899888654311 1 111 5689999999999999999999764
Q ss_pred --CCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCcccceeccccccchhhhhcCcHHHHHH
Q 036972 73 --LKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFTFSAVCSTAEQLCKNPIGYAVE 150 (275)
Q Consensus 73 --~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~~~~~~~~~~~l~~~~l~~~A~ 150 (275)
..++|+||+|+||+|+|++|||++++++.+++.++||+|+|+ +||+|++||||++..+.+.++++||.+.+|+++|.
T Consensus 252 ~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl-~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~ 330 (439)
T 4g22_A 252 GNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARL-RPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAAS 330 (439)
T ss_dssp GCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTS-SSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCC-CCCCCCCcccceeehhhcceEHHHHhhCcHHHHHH
Confidence 257999999999999999999999888999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHhcc-cccc-----CCCCcEEEecCCCCCCCcccccCCccceeeeccc-cceEEEEEe
Q 036972 151 LVKKAKAQMNEEYIRSVADLMVIKGR-RIKS-----STRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAGA-VAVFSFCVK 223 (275)
Q Consensus 151 ~IR~ai~~~~~e~v~~~~~~~~~~~~-~~~~-----~~~~~~~vssw~~~~~y~~DFG~GkP~~~~~~~~-~~~~~~ilp 223 (275)
+||++|.+++++|+++.++|++...+ ..+. ....++.+|||+++++|++|||||||+++++... .+|.++++|
T Consensus 331 ~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p 410 (439)
T 4g22_A 331 KIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILP 410 (439)
T ss_dssp HHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEE
T ss_pred HHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEee
Confidence 99999999999999999999874211 1110 0246899999999999999999999999998763 678888899
Q ss_pred cCCCCCCCcEEEEEecCHHHHHHHHHHHH
Q 036972 224 YQSKNGEPGILVPICLPQSAMERFQEELK 252 (275)
Q Consensus 224 ~~~~~G~~g~ev~v~L~~~~m~~l~~d~~ 252 (275)
+++++| |++|.|+|++++|++|++.+.
T Consensus 411 ~~~~~g--gi~v~v~L~~~~m~~f~~~~~ 437 (439)
T 4g22_A 411 SPTNDG--SMSVAISLQGEHMKLFQSFLY 437 (439)
T ss_dssp CTTCSS--CEEEEEEEEHHHHHHHHHHHT
T ss_pred cCCCCC--cEEEEEECCHHHHHHHHHHhc
Confidence 876666 999999999999999998764
|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
|---|
| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 275 | |||
| d1q9ja2 | 238 | Polyketide synthase associated protein 5, PapA5 {M | 97.57 |
| >d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: Polyketide synthase associated protein 5, PapA5 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.57 E-value=0.0017 Score=52.39 Aligned_cols=103 Identities=11% Similarity=-0.046 Sum_probs=77.0
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCccccee
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFT 129 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~ 129 (275)
.....+.++++.-++|++.|.++ .+|.+.++.|-+-..+.+-.+. ++....+..+++.|+++ .|+...+.+||.+.
T Consensus 31 ~~~~~~~ls~~~t~~l~~~~~~~--~~T~~~~l~aa~~~~l~~~~~~-~~~~~~~~~~~~~r~~~-~~~~~~~~~G~~~~ 106 (238)
T d1q9ja2 31 VPVTRLWLSKQQTSDLMAFGREH--RLSLNAVVAAAILLTEWQLRNT-PHVPIPYVYPVDLRFVL-APPVAPTEATNLLG 106 (238)
T ss_dssp CCEEEECCCHHHHHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHTC-SSCCEEEEEEEETTTTS-SSCCCTTTBSCCEE
T ss_pred CceEEEEeCHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHhCC-CCccccccccccccccc-cCccccceeEeeee
Confidence 34566799999999999999763 4788998888655555444333 34567889999999999 88888888999877
Q ss_pred ccccccchhhhhcCcHHHHHHHHHHHHHh
Q 036972 130 FSAVCSTAEQLCKNPIGYAVELVKKAKAQ 158 (275)
Q Consensus 130 ~~~~~~~~~~l~~~~l~~~A~~IR~ai~~ 158 (275)
.......... +.++.+++..+++.+..
T Consensus 107 ~~~~r~~~~~--~~~~~~l~~~v~~~l~~ 133 (238)
T d1q9ja2 107 AASYLAEIGP--NTDIVDLASDIVATLRA 133 (238)
T ss_dssp EEEEEECCCS--SCCHHHHHHHHHHHHHH
T ss_pred eEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence 6655554331 35788889888887753
|