Citrus Sinensis ID: 036987

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------48
MLIDLSASFIHSINCTSLHQQVLLDIPIEEVFENLKCLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT
cccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHEEEEEEEEccHHHHHHHHHccccccccEEEEEcccccccccEEEEccccEEEcEEEEEEcccEEEEccEEEEccEEEEcccccccccccccccccccccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccEEEEEccccccEEEEEEEEccccEEEEEEccHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHccEEEEccccHHHHHHHHHHHcccEEEEccccc
ccccccHHHHHHHHHHHHcccccccccHHHHHHHHccccHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccEEEEEHHHcccccEEEEEccccccccHHHEcccccccHHHHHHHHHHHcccccEccccccccEEEccccccccEEEEEEEHHHHHHHHHHHHHHHHccccccccccEEEEccccccHcHcHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccEEEccccccccEEEEEEEcccccEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHcccEEEEccccc
MLIDLSASFIhsinctslhqQVLLDIPIEEVFEnlkcltsddvKERLNlfgynrlegkkeSKILKYLGCMCNPLSWVMEAAAIMAIALAhgggkdpdyhdFIGIVIIINSttsfkeennAGNAAAALMAQSYLrdgrwneedaaemvpgdiisIKLGEivsadarlvegdplkidrFQFCLWsaltgeslpvtknpgdgvysgstckqgEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAgmdvlcsdktgtltlNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFllfnptdkraaITYVdgagimhrvskgapEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRkrgtkdnpggpwefvgllplfdpphhdsaetISDQIAIAKETGrklgmgtnmylsssllreskdetnsalpidELIEKadgfaglfpehKYEIVRRLHdrkhisgmtgdgt
MLIDLSASFIHSINCTSLHQQVLLDIPIEEVFENLKcltsddvkerlnlfgynrlegkkeskILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKrgtkdnpggPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVrrlhdrkhisgmtgdgt
MLIDLSASFIHSINCTSLHQQVLLDIPIEEVFENLKCLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEaaaimaialaHGGGKDPDYHDFIGIVIIINSTTSFKEEnnagnaaaaLMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT
***DLSASFIHSINCTSLHQQVLLDIPIEEVFENLKCLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKE***AGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDP************IAI*********************************IDELIEKADGFAGLFPEHKYEIVRRLH*************
********************QVLLDIPIEEVFENLKCLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLH************IEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLS**************LPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT
MLIDLSASFIHSINCTSLHQQVLLDIPIEEVFENLKCLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHI********
*LIDLSASFIHSINCTSLHQQVLLDIPIEEVFENLKCLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCR******NPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTG***
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MLIDLSASFIHSINCTSLHQQVLLDIPIEEVFENLKCLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANCNGHLHLIQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTDMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query478 2.2.26 [Sep-21-2011]
P83970 951 Plasma membrane ATPase OS N/A no 0.933 0.468 0.488 1e-121
Q08435 957 Plasma membrane ATPase 1 N/A no 0.518 0.259 0.677 1e-102
Q08436 956 Plasma membrane ATPase 3 N/A no 0.518 0.259 0.673 1e-102
Q9SU58 960 ATPase 4, plasma membrane yes no 0.518 0.258 0.677 1e-101
P23980 704 Plasma membrane ATPase 2 N/A no 0.518 0.352 0.666 1e-101
Q9LV11 956 ATPase 11, plasma membran no no 0.518 0.259 0.673 1e-100
P22180 956 Plasma membrane ATPase 1 N/A no 0.518 0.259 0.666 1e-100
P19456 948 ATPase 2, plasma membrane no no 0.518 0.261 0.635 2e-93
Q9SJB3 949 ATPase 5, plasma membrane no no 0.529 0.266 0.634 3e-93
Q7XPY2 951 Plasma membrane ATPase OS no no 0.518 0.260 0.625 9e-93
>sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 Back     alignment and function desciption
 Score =  436 bits (1120), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 287/587 (48%), Positives = 355/587 (60%), Gaps = 141/587 (24%)

Query: 23  LLDIPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVM 78
           L +IPIEEVFE LKC    LTSD+  +R+ +FG N+LE KKESK+LK+LG M NPLSWVM
Sbjct: 14  LENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLGFMWNPLSWVM 73

Query: 79  EAAAIMAIALAHGGGKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMA-----QS 131
           E AAIMAIALA+GGGK PD+ DF+GI++  +INST SF EENNAGNAAAALMA       
Sbjct: 74  EMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTK 133

Query: 132 YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLP 191
            LRDGRW E++A+ +VPGDI+SIKLG+IV ADARL+EGDPLKID+      S LTGESLP
Sbjct: 134 VLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQ------SGLTGESLP 187

Query: 192 VTKNPGDGVYSGSTCKQGEIAAVVIA-----------------NCNGHLHLIQSAI---- 230
           VTKNPGD V+SGSTCKQGEI AVVIA                 N  GH   + +AI    
Sbjct: 188 VTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAIGNFC 247

Query: 231 --------------------TKRMTAIEEM---------AGMDVLCS----------DKT 251
                                K    IE +           M  + S           + 
Sbjct: 248 IVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQ 307

Query: 252 GTLT-----LNKLTDMVVLMAARASTLE-NQVAIDGAIVSMLA-GPKKARVHFL------ 298
           G +T     + +L  M VL + +  TL  N++++D  +V + A G  K  V  L      
Sbjct: 308 GAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAARASR 367

Query: 299 --------------LFNPTDKRAAI-----------------TYVDGAGIMHRVSKGAPE 327
                         L +P + RA I                 TY+D  G  HR SKGAPE
Sbjct: 368 VENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKGAPE 427

Query: 328 QILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLL 385
           QI+ L +  +++++KVH +I+K+AE GLRSLAVA Q +       +KD+PGGPW+F+GLL
Sbjct: 428 QIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEV----PEKSKDSPGGPWQFIGLL 483

Query: 386 PLFDPPHHDSAETI--------------SDQIAIAKETGRKLGMGTNMYLSSSLLRESKD 431
           PLFDPP HDSAETI               DQ+AI KETGR+LGMGTNMY SS+LL +SKD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543

Query: 432 ETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478
            +  +LP+DELIEKADGFAG+FPEHKYEIV+RL ++KHI GMTGDG 
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGV 590
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.
Triticum aestivum (taxid: 4565)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6
>sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 Back     alignment and function description
>sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 Back     alignment and function description
>sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 Back     alignment and function description
>sp|P23980|PMA2_SOLLC Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1 Back     alignment and function description
>sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 Back     alignment and function description
>sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 Back     alignment and function description
>sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 Back     alignment and function description
>sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 Back     alignment and function description
>sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query478
242036699 792 hypothetical protein SORBIDRAFT_01g04500 0.920 0.555 0.569 1e-142
255540887 801 H(\+)-transporting atpase plant/fungi pl 0.826 0.493 0.602 1e-135
125580211 931 hypothetical protein OsJ_37014 [Oryza sa 0.941 0.483 0.548 1e-134
218187320 931 hypothetical protein OsI_39279 [Oryza sa 0.941 0.483 0.548 1e-133
296081761 862 unnamed protein product [Vitis vinifera] 0.895 0.496 0.585 1e-132
255541068 874 H(\+)-transporting atpase plant/fungi pl 0.857 0.469 0.559 1e-127
449457931 948 PREDICTED: ATPase 8, plasma membrane-typ 0.926 0.467 0.481 1e-119
50400847 951 RecName: Full=Plasma membrane ATPase; Al 0.933 0.468 0.488 1e-119
56112362 951 plasma membrane H+-ATPase [Triticum aest 0.933 0.468 0.488 1e-119
357166497 951 PREDICTED: plasma membrane ATPase-like i 0.933 0.468 0.487 1e-118
>gi|242036699|ref|XP_002465744.1| hypothetical protein SORBIDRAFT_01g045000 [Sorghum bicolor] gi|241919598|gb|EER92742.1| hypothetical protein SORBIDRAFT_01g045000 [Sorghum bicolor] Back     alignment and taxonomy information
 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 296/520 (56%), Positives = 358/520 (68%), Gaps = 80/520 (15%)

Query: 26  IPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAA 81
           +P+EEV E L      L+S D  ERL LFG NRL+ K+E+K+LK+L  M NPLSWVMEAA
Sbjct: 5   LPLEEVLEQLNTSRGGLSSSDAAERLELFGANRLQEKRENKVLKFLSFMWNPLSWVMEAA 64

Query: 82  AIMAIALAHGGGKDPDYHDFIGIV--IIINSTTSFKEENNAGNAAAALMAQ-----SYLR 134
           A+MA+ L  GG + PD+ DF+GIV  ++INS  SF EENNAGNAAAALM++       LR
Sbjct: 65  AVMALVLV-GGSQGPDWEDFLGIVCLLVINSVISFIEENNAGNAAAALMSRLALKTKVLR 123

Query: 135 DGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTK 194
           DG+W E DA+ +VPGDIISI+LG+I+ ADARL+EGDP+K+D+      SALTGESLPVTK
Sbjct: 124 DGQWQELDASVLVPGDIISIRLGDIIPADARLLEGDPVKVDQ------SALTGESLPVTK 177

Query: 195 NPGDGVYSGSTCKQGEIAAVVIA-----------------NCNGHLHLIQSAITKRMTAI 237
             GD V++GS CK GEI AVVIA                 +  GH H  + AITKRMTAI
Sbjct: 178 RTGDLVFTGSICKHGEIEAVVIATGINSFFGKAAHLVDSTDVVGHFH--KGAITKRMTAI 235

Query: 238 EEMAGMDVLCSDKTGTLTLNKLT---------------DMVVLMAARASTLENQVAIDGA 282
           EEMAGMDVLC DKTGTLTLN LT               DMV+L+AARAS +ENQ AID A
Sbjct: 236 EEMAGMDVLCCDKTGTLTLNHLTVDKNLIEVFSREMEKDMVILLAARASRVENQDAIDMA 295

Query: 283 IVSMLAGPKKAR-----VHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK-- 335
           I++MLA PK+AR     VHF  FNP DKR AITY+D  G   RVSKGAP+QIL+L +   
Sbjct: 296 IINMLADPKEARANITEVHFFPFNPVDKRTAITYLDSNGNWFRVSKGAPDQILNLCYNKD 355

Query: 336 EIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDS 395
           +I +KV  ++D+FAE GLRSLAVA+Q I       +K +PGGPW   GLLPLFDPP HDS
Sbjct: 356 DIAEKVQIVVDRFAERGLRSLAVAYQEI----PERSKHSPGGPWTLCGLLPLFDPPRHDS 411

Query: 396 AETI--------------SDQIAIAKETGRKLGMGTNMYLSSSLL-RESKDETNSA--LP 438
           A+TI               D +AIAKETGR+LGMGTNM+ S+SL  R  +D  ++A  +P
Sbjct: 412 ADTILRALDLGICVKMITGDHLAIAKETGRRLGMGTNMHPSASLFGRRERDGEDAATVVP 471

Query: 439 IDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478
           +DEL+EKADGFAG+FPEHKYEIVR L    H+ GMTGDG 
Sbjct: 472 VDELVEKADGFAGVFPEHKYEIVRILQGNGHVCGMTGDGV 511

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255540887|ref|XP_002511508.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] gi|223550623|gb|EEF52110.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|125580211|gb|EAZ21357.1| hypothetical protein OsJ_37014 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|218187320|gb|EEC69747.1| hypothetical protein OsI_39279 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|296081761|emb|CBI20766.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255541068|ref|XP_002511598.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] gi|223548778|gb|EEF50267.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449457931|ref|XP_004146701.1| PREDICTED: ATPase 8, plasma membrane-type-like [Cucumis sativus] gi|449517818|ref|XP_004165941.1| PREDICTED: ATPase 8, plasma membrane-type-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|50400847|sp|P83970.1|PMA1_WHEAT RecName: Full=Plasma membrane ATPase; AltName: Full=Proton pump gi|45268533|gb|AAS55889.1| plasma membrane H+-ATPase [Triticum aestivum] Back     alignment and taxonomy information
>gi|56112362|gb|AAV71150.1| plasma membrane H+-ATPase [Triticum aestivum] Back     alignment and taxonomy information
>gi|357166497|ref|XP_003580730.1| PREDICTED: plasma membrane ATPase-like isoform 1 [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query478
TAIR|locus:2172244 956 HA11 "H(+)-ATPase 11" [Arabido 0.374 0.187 0.678 3.5e-150
TAIR|locus:2097895 960 HA4 "H(+)-ATPase 4" [Arabidops 0.374 0.186 0.678 5.4e-150
TAIR|locus:2046623 949 HA5 "H(+)-ATPase 5" [Arabidops 0.374 0.188 0.653 4e-138
TAIR|locus:2044450 949 HA1 "H(+)-ATPase 1" [Arabidops 0.374 0.188 0.638 1.2e-136
TAIR|locus:2165600 949 HA3 "H(+)-ATPase 3" [Arabidops 0.374 0.188 0.613 4e-136
TAIR|locus:2081932 961 HA7 "H(+)-ATPase 7" [Arabidops 0.439 0.218 0.617 3.5e-131
TAIR|locus:2053343 949 HA6 "H(+)-ATPase 6" [Arabidops 0.443 0.223 0.617 1.3e-122
TAIR|locus:2020372 947 AHA10 "autoinhibited H(+)-ATPa 0.443 0.223 0.600 2.5e-117
TAIR|locus:2025727 954 HA9 "H(+)-ATPase 9" [Arabidops 0.374 0.187 0.618 7.7e-115
TAIR|locus:2096549 948 HA8 "H(+)-ATPase 8" [Arabidops 0.374 0.188 0.628 1.1e-114
TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 666 (239.5 bits), Expect = 3.5e-150, Sum P(3) = 3.5e-150
 Identities = 135/199 (67%), Positives = 156/199 (78%)

Query:   295 VHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK--EIEKKVHGIIDKFAECG 352
             VHFL FNPTDKR A+TY+D  G MHRVSKGAPEQIL+LAH   EIE++VH +IDKFAE G
Sbjct:   399 VHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERG 458

Query:   353 LRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETI------------- 399
             LRSLAVA+Q +      GTK++ GGPW+F+GL+PLFDPP HDSAETI             
Sbjct:   459 LRSLAVAYQEV----PEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514

Query:   400 -SDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKY 458
               DQ+AI KETGR+LGMGTNMY SS+LL + KDE+  ALPID+LIEKADGFAG+FPEHKY
Sbjct:   515 TGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKY 574

Query:   459 EIVRRLHDRKHISGMTGDG 477
             EIV+RL  RKHI GMTGDG
Sbjct:   575 EIVKRLQARKHICGMTGDG 593
GO:0000166 "nucleotide binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006200 "ATP catabolic process" evidence=IEA
GO:0006754 "ATP biosynthetic process" evidence=IEA
GO:0006812 "cation transport" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA
GO:0016020 "membrane" evidence=IEA;IDA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016887 "ATPase activity" evidence=IEA;ISS
GO:0046872 "metal ion binding" evidence=IEA
TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
TIGR01647 754 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e 1e-100
TIGR01647 754 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e 2e-66
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 4e-37
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 1e-33
TIGR01494543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 2e-30
pfam00122222 pfam00122, E1-E2_ATPase, E1-E2 ATPase 8e-27
TIGR01524 867 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating 4e-14
TIGR01512 536 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb 8e-14
PRK15122 903 PRK15122, PRK15122, magnesium-transporting ATPase; 9e-14
TIGR01522 884 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- 2e-13
TIGR01494 543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 8e-13
TIGR01524 867 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating 8e-13
TIGR01523 1053 TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu 2e-12
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 4e-12
PRK10517 902 PRK10517, PRK10517, magnesium-transporting ATPase 4e-12
smart0083175 smart00831, Cation_ATPase_N, Cation transporter/AT 4e-12
TIGR01116 917 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic 5e-12
pfam0069069 pfam00690, Cation_ATPase_N, Cation transporter/ATP 4e-11
TIGR01525 556 TIGR01525, ATPase-IB_hvy, heavy metal translocatin 6e-10
TIGR01511 572 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans 7e-10
PRK10517 902 PRK10517, PRK10517, magnesium-transporting ATPase 1e-09
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 2e-09
TIGR01525556 TIGR01525, ATPase-IB_hvy, heavy metal translocatin 3e-09
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 4e-09
PRK11033 741 PRK11033, zntA, zinc/cadmium/mercury/lead-transpor 7e-09
PRK15122 903 PRK15122, PRK15122, magnesium-transporting ATPase; 8e-09
TIGR01522 884 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- 3e-08
TIGR01116 917 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic 3e-08
TIGR01106 997 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux 1e-07
TIGR01523 1053 TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu 1e-06
TIGR01657 1054 TIGR01657, P-ATPase-V, P-type ATPase of unknown pu 2e-05
PRK01122 679 PRK01122, PRK01122, potassium-transporting ATPase 1e-04
COG2216 681 COG2216, KdpB, High-affinity K+ transport system, 3e-04
TIGR01511572 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans 0.001
PRK14010 673 PRK14010, PRK14010, potassium-transporting ATPase 0.001
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 0.002
TIGR01497 675 TIGR01497, kdpB, K+-transporting ATPase, B subunit 0.003
>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information 
 Score =  318 bits (816), Expect = e-100
 Identities = 130/286 (45%), Positives = 167/286 (58%), Gaps = 48/286 (16%)

Query: 227 QSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------------DMVVLMAARASTL 273
           + AI  R+TAIEE+AGMD+LCSDKTGTLTLNKL+             D V+L AA AS  
Sbjct: 270 KKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASRE 329

Query: 274 ENQVAIDGAIVSMLAGPKKAR-----VHFLLFNPTDKRAAITYVDGA-GIMHRVSKGAPE 327
           E+Q AID A++      K+AR     + F+ F+P DKR   T  D   G   +V+KGAP+
Sbjct: 330 EDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQ 389

Query: 328 QILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLL 385
            IL L    KEIE+KV   +D+ A  G R+L VA            + +  G W F+GLL
Sbjct: 390 VILDLCDNKKEIEEKVEEKVDELASRGYRALGVA------------RTDEEGRWHFLGLL 437

Query: 386 PLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESKD 431
           PLFDPP HD+ ETI               D +AIAKET R+LG+GTN+Y +  LL +  +
Sbjct: 438 PLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLL-KGDN 496

Query: 432 ETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDG 477
             +    + E++E ADGFA +FPEHKYEIV  L  R H+ GMTGDG
Sbjct: 497 RDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 542

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754
>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase Back     alignment and domain information
>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus Back     alignment and domain information
>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus Back     alignment and domain information
>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 478
KOG0202 972 consensus Ca2+ transporting ATPase [Inorganic ion 100.0
PRK10517 902 magnesium-transporting ATPase MgtA; Provisional 100.0
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 100.0
TIGR01647 755 ATPase-IIIA_H plasma-membrane proton-efflux P-type 100.0
TIGR01523 1053 ATPase-IID_K-Na potassium and/or sodium efflux P-t 100.0
PRK15122 903 magnesium-transporting ATPase; Provisional 100.0
TIGR01524 867 ATPase-IIIB_Mg magnesium-translocating P-type ATPa 100.0
KOG0205 942 consensus Plasma membrane H+-transporting ATPase [ 100.0
KOG0204 1034 consensus Calcium transporting ATPase [Inorganic i 100.0
TIGR01106 997 ATPase-IIC_X-K sodium or proton efflux -- potassiu 100.0
TIGR01522 884 ATPase-IIA2_Ca golgi membrane calcium-translocatin 100.0
TIGR01517 941 ATPase-IIB_Ca plasma-membrane calcium-translocatin 100.0
TIGR01657 1054 P-ATPase-V P-type ATPase of unknown pump specifici 100.0
TIGR01116 917 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium 100.0
KOG0208 1140 consensus Cation transport ATPase [Inorganic ion t 100.0
TIGR01652 1057 ATPase-Plipid phospholipid-translocating P-type AT 100.0
PRK01122 679 potassium-transporting ATPase subunit B; Provision 100.0
PRK14010 673 potassium-transporting ATPase subunit B; Provision 100.0
KOG0203 1019 consensus Na+/K+ ATPase, alpha subunit [Inorganic 100.0
TIGR01497 675 kdpB K+-transporting ATPase, B subunit. One sequen 100.0
KOG0209 1160 consensus P-type ATPase [Inorganic ion transport a 100.0
PLN03190 1178 aminophospholipid translocase; Provisional 100.0
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 100.0
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 100.0
TIGR01494499 ATPase_P-type ATPase, P-type (transporting), HAD s 100.0
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 100.0
TIGR01512 536 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo 100.0
TIGR01525556 ATPase-IB_hvy heavy metal translocating P-type ATP 100.0
TIGR01511562 ATPase-IB1_Cu copper-(or silver)-translocating P-t 100.0
PRK10671 834 copA copper exporting ATPase; Provisional 100.0
KOG0210 1051 consensus P-type ATPase [Inorganic ion transport a 100.0
KOG0206 1151 consensus P-type ATPase [General function predicti 100.0
COG2216 681 KdpB High-affinity K+ transport system, ATPase cha 100.0
PF00122230 E1-E2_ATPase: E1-E2 ATPase p-type cation-transport 99.89
PF00702215 Hydrolase: haloacid dehalogenase-like hydrolase; I 99.79
PF0069069 Cation_ATPase_N: Cation transporter/ATPase, N-term 99.31
smart0083164 Cation_ATPase_N Cation transporter/ATPase, N-termi 98.93
PF1324691 Hydrolase_like2: Putative hydrolase of sodium-pota 98.88
COG4087152 Soluble P-type ATPase [General function prediction 97.51
KOG4383 1354 consensus Uncharacterized conserved protein [Funct 92.9
TIGR02137203 HSK-PSP phosphoserine phosphatase/homoserine phosp 86.42
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.8e-83  Score=666.62  Aligned_cols=443  Identities=30%  Similarity=0.456  Sum_probs=386.2

Q ss_pred             ccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCC
Q 036987           22 VLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKD   95 (478)
Q Consensus        22 ~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   95 (478)
                      +.|..+++|+++.|.+     ||.+|+.+|++.||.|+++... .+.|+.+++||.+|+..+|+++|++||.+.      
T Consensus         3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------   76 (972)
T KOG0202|consen    3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------   76 (972)
T ss_pred             chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence            5677899999999998     9999999999999999999865 788999999999999999999999999997      


Q ss_pred             CchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEe
Q 036987           96 PDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVE  168 (478)
Q Consensus        96 ~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~  168 (478)
                       .|.++++|.+  ++++.+.++|||+++|++++|+++.     |+|+|+.+.+++++|||||||.|+.||+||||.++++
T Consensus        77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e  155 (972)
T KOG0202|consen   77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE  155 (972)
T ss_pred             -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence             6767776666  8889999999999999999999988     9999999999999999999999999999999999999


Q ss_pred             cCcEEEeccccccccccccCCceeecCCC--------------CeeeeccEEeeeeEEEEEEEe----e-----------
Q 036987          169 GDPLKIDRFQFCLWSALTGESLPVTKNPG--------------DGVYSGSTCKQGEIAAVVIAN----C-----------  219 (478)
Q Consensus       169 g~~~~vde~~~~~~S~LTGEs~pv~K~~~--------------~~v~aGt~v~~g~~~~~V~~t----~-----------  219 (478)
                      ..++.+||      |+|||||.|+.|...              +++|+||.|..|.++++|++|    +           
T Consensus       156 ~~sl~iDe------S~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~  229 (972)
T KOG0202|consen  156 AKSLRIDE------SSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQAT  229 (972)
T ss_pred             eeeeeeec------ccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhcc
Confidence            98999999      999999999999542              689999999999999999999    2           


Q ss_pred             ---------------------------------cccccc-----------------------------------------
Q 036987          220 ---------------------------------NGHLHL-----------------------------------------  225 (478)
Q Consensus       220 ---------------------------------~g~~~~-----------------------------------------  225 (478)
                                                       +|+|+.                                         
T Consensus       230 e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG  309 (972)
T KOG0202|consen  230 ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG  309 (972)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence                                             222220                                         


Q ss_pred             -----cccceecchhHHhhhcceeEEEecCccccccCchh----------------------------------------
Q 036987          226 -----IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT----------------------------------------  260 (478)
Q Consensus       226 -----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~----------------------------------------  260 (478)
                           |++++||++.++|+||.+++||+|||||||+|+|+                                        
T Consensus       310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~  389 (972)
T KOG0202|consen  310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDK  389 (972)
T ss_pred             HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccccc
Confidence                 99999999999999999999999999999999999                                        


Q ss_pred             -------HHHHHHHHHhccc-----c------cCChhhHHHHHHcCC---cc-----e----------------eeeEee
Q 036987          261 -------DMVVLMAARASTL-----E------NQVAIDGAIVSMLAG---PK-----K----------------ARVHFL  298 (478)
Q Consensus       261 -------~~~l~~~~~~~~~-----~------~~~p~~~ai~~~~~~---~~-----~----------------~~~~~~  298 (478)
                             .+++..++.|+..     .      -+.|+|.|+...+..   +.     .                .++..+
T Consensus       390 ~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~el  469 (972)
T KOG0202|consen  390 AGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAEL  469 (972)
T ss_pred             ccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEe
Confidence                   2334444444321     0      247889998765421   00     0                115889


Q ss_pred             cCCCCCceEEEEEEeCCCe--EEEEEeCcHHHHHHhcc--------------HHHHHHHHHHHHHHhhccceeeEEEeee
Q 036987          299 LFNPTDKRAAITYVDGAGI--MHRVSKGAPEQILHLAH--------------KEIEKKVHGIIDKFAECGLRSLAVAWQV  362 (478)
Q Consensus       299 ~F~s~~k~~sv~~~~~~g~--~~~~~KGa~e~i~~~c~--------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~  362 (478)
                      ||++++|+|++.+.+..++  +..|+|||||.|+++|+              +..++.+.+...+|+++|+||+++|+++
T Consensus       470 pFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~  549 (972)
T KOG0202|consen  470 PFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKD  549 (972)
T ss_pred             ecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccC
Confidence            9999999999999865554  78999999999999996              4568889999999999999999999997


Q ss_pred             ccc-cc------cCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCC--
Q 036987          363 INL-CR------KRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNM--  419 (478)
Q Consensus       363 ~~~-~~------~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~--  419 (478)
                      .+. ..      +..++...|++|+|+|++++.||||++++++|+              |++.||.+|||++||...-  
T Consensus       550 ~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed  629 (972)
T KOG0202|consen  550 SPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED  629 (972)
T ss_pred             CcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc
Confidence            663 11      123577789999999999999999999999999              9999999999999986532  


Q ss_pred             ccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987          420 YLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT  478 (478)
Q Consensus       420 ~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv  478 (478)
                      .++..++|.+.+ .++.++++.......||||++|.||.+||++||++|.+||||||||
T Consensus       630 ~~~~~~TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGV  687 (972)
T KOG0202|consen  630 VSSMALTGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGV  687 (972)
T ss_pred             ccccccchhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCc
Confidence            356778887766 7899999999999999999999999999999999999999999997

>PRK10517 magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>PRK15122 magnesium-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase Back     alignment and domain information
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information
>PRK01122 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>PRK14010 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01497 kdpB K+-transporting ATPase, B subunit Back     alignment and domain information
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03190 aminophospholipid translocase; Provisional Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase Back     alignment and domain information
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0206 consensus P-type ATPase [General function prediction only] Back     alignment and domain information
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) Back     alignment and domain information
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus Back     alignment and domain information
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit Back     alignment and domain information
>COG4087 Soluble P-type ATPase [General function prediction only] Back     alignment and domain information
>KOG4383 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
3b8c_A 885 Crystal Structure Of A Plasma Membrane Proton Pump 2e-94
1mhs_A 920 Model Of Neurospora Crassa Proton Atpase Length = 9 4e-34
3ixz_A 1034 Pig Gastric H+K+-Atpase Complexed With Aluminium Fl 2e-04
3n23_A 992 Crystal Structure Of The High Affinity Complex Betw 2e-04
3b8e_A 998 Crystal Structure Of The Sodium-Potassium Pump Leng 2e-04
2zxe_A 1028 Crystal Structure Of The Sodium - Potassium Pump In 5e-04
>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 Back     alignment and structure 
Iteration: 1

 Score =  342 bits (877), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 183/288 (63%), Positives = 209/288 (72%), Gaps = 40/288 (13%)
Query: 227 QSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT---------------DMVVLMAARAS 271
           Q AITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+               D V+L AA AS
Sbjct: 307 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMAS 366
Query: 272 TLENQVAIDGAIVSMLAGPKKAR-----VHFLLFNPTDKRAAITYVDGAGIMHRVSKGAP 326
            +ENQ AID A+V MLA PK+AR     VHFL FNP DKR A+TY+DG+G  HRVSKGAP
Sbjct: 367 RVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAP 426
Query: 327 EQILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGL 384
           EQIL LA    ++ KKV  IIDK+AE GLRSLAVA QV+       TK++PG PWEFVGL
Sbjct: 427 EQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVV----PEKTKESPGAPWEFVGL 482
Query: 385 LPLFDPPHHDSAETI--------------SDQIAIAKETGRKLGMGTNMYLSSSLLRESK 430
           LPLFDPP HDSAETI               DQ+AI KETGR+LGMGTNMY SS+LL   K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 431 DETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478
           D   +++P++ELIEKADGFAG+FPEHKYEIV++L +RKHI GMTGDG 
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGV 590
>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 Back     alignment and structure
>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 Back     alignment and structure
>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 Back     alignment and structure
>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 Back     alignment and structure
>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 6e-92
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 2e-66
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 2e-86
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 1e-61
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 1e-39
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 5e-17
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 2e-39
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 2e-17
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 4e-33
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 4e-12
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 5e-05
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 5e-12
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 2e-11
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 1e-04
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 5e-10
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 9e-05
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 2e-09
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 8e-04
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 3e-09
3gwi_A170 Magnesium-transporting ATPase, P-type 1; P-type AT 1e-05
3a1c_A287 Probable copper-exporting P-type ATPase A; ATP-bin 1e-04
2yj3_A263 Copper-transporting ATPase; hydrolase, P-type ATPa 2e-04
3skx_A280 Copper-exporting P-type ATPase B; P1B-ATPase, ATP 4e-04
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
 Score =  297 bits (762), Expect = 6e-92
 Identities = 182/287 (63%), Positives = 208/287 (72%), Gaps = 40/287 (13%)

Query: 227 QSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT---------------DMVVLMAARAS 271
           Q AITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+               D V+L AA AS
Sbjct: 307 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMAS 366

Query: 272 TLENQVAIDGAIVSMLAGPKKA-----RVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAP 326
            +ENQ AID A+V MLA PK+A      VHFL FNP DKR A+TY+DG+G  HRVSKGAP
Sbjct: 367 RVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAP 426

Query: 327 EQILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGL 384
           EQIL LA    ++ KKV  IIDK+AE GLRSLAVA QV+       TK++PG PWEFVGL
Sbjct: 427 EQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVP----EKTKESPGAPWEFVGL 482

Query: 385 LPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESK 430
           LPLFDPP HDSAETI               DQ+AI KETGR+LGMGTNMY SS+LL   K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542

Query: 431 DETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDG 477
           D   +++P++ELIEKADGFAG+FPEHKYEIV++L +RKHI GMTGDG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDG 589
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 Back     alignment and structure
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 Back     alignment and structure
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 Back     alignment and structure
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 Back     alignment and structure
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query478
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 100.0
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 100.0
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 100.0
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 100.0
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 100.0
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 100.0
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 100.0
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 100.0
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 99.89
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 99.87
3gwi_A170 Magnesium-transporting ATPase, P-type 1; P-type AT 99.8
2yj3_A263 Copper-transporting ATPase; hydrolase, P-type ATPa 99.65
3a1c_A287 Probable copper-exporting P-type ATPase A; ATP-bin 99.68
3skx_A280 Copper-exporting P-type ATPase B; P1B-ATPase, ATP 99.33
1svj_A156 Potassium-transporting ATPase B chain; alpha-beta 99.21
4fe3_A297 Cytosolic 5'-nucleotidase 3; substrate complex, HA 98.58
2kmv_A185 Copper-transporting ATPase 1; menkes, nucleotide b 98.4
2arf_A165 Wilson disease ATPase; P-type ATPase,ATP7B, copper 97.74
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=1.7e-81  Score=700.58  Aligned_cols=450  Identities=70%  Similarity=1.078  Sum_probs=393.3

Q ss_pred             cccccccCCHHHHHHHcCC----CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCC
Q 036987           19 HQQVLLDIPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGK   94 (478)
Q Consensus        19 ~~~~~~~~~~~~~~~~l~~----Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   94 (478)
                      .+.++|.++++++++.|++    ||++|+++|+++||+|+++.++++.|+.|+++|++|++++|+++++++++++...+.
T Consensus        10 ~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~   89 (885)
T 3b8c_A           10 ETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGR   89 (885)
T ss_dssp             --CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTS
T ss_pred             cchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            4568999999999999987    999999999999999999988888899999999999999999999999988755555


Q ss_pred             CCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEE
Q 036987           95 DPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLV  167 (478)
Q Consensus        95 ~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl  167 (478)
                      +..|++++++++  +++.++++++++++++++++|.++.     |+|||++++|++++|+|||+|.|++||+|||||+|+
T Consensus        90 ~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll  169 (885)
T 3b8c_A           90 PPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLL  169 (885)
T ss_dssp             CSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEE
Confidence            557888776655  6777889999999999999988765     999999999999999999999999999999999999


Q ss_pred             ecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe----ecccc-------------cc-----
Q 036987          168 EGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGHL-------------HL-----  225 (478)
Q Consensus       168 ~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~~-------------~~-----  225 (478)
                      +|+.+.|||      |+|||||.|+.|.+|+.+|+||.|.+|.+.++|++|    ..|++             ++     
T Consensus       170 ~g~~l~VdE------S~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i  243 (885)
T 3b8c_A          170 EGDPLKVDQ------SALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI  243 (885)
T ss_dssp             CSSCBCCCC------CSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHH
T ss_pred             EcCcccccc------cccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHH
Confidence            996679999      999999999999999999999999999999999998    22221             11     


Q ss_pred             --------------------------------------------------------------cccceecchhHHhhhcce
Q 036987          226 --------------------------------------------------------------IQSAITKRMTAIEEMAGM  243 (478)
Q Consensus       226 --------------------------------------------------------------~~~ilvk~~~~~e~lg~v  243 (478)
                                                                                    ++|++||+++++|+||++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v  323 (885)
T 3b8c_A          244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM  323 (885)
T ss_dssp             HHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCC
Confidence                                                                          999999999999999999


Q ss_pred             eEEEecCccccccCchh---------------HHHHHHHHHhcccccCChhhHHHHHHcCCcc-----eeeeEeecCCCC
Q 036987          244 DVLCSDKTGTLTLNKLT---------------DMVVLMAARASTLENQVAIDGAIVSMLAGPK-----KARVHFLLFNPT  303 (478)
Q Consensus       244 ~~i~~DKTGTLT~~~~~---------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~-----~~~~~~~~F~s~  303 (478)
                      ++||||||||||+|+|+               ++++.+++.++...++||++.|+++++.++.     ...++.+||+|.
T Consensus       324 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~  403 (885)
T 3b8c_A          324 DVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPV  403 (885)
T ss_dssp             CCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTT
T ss_pred             CEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcc
Confidence            99999999999999998               2456777777765456999999999876432     134778999999


Q ss_pred             CceEEEEEEeCCCeEEEEEeCcHHHHHHhcc--HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEE
Q 036987          304 DKRAAITYVDGAGIMHRVSKGAPEQILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEF  381 (478)
Q Consensus       304 ~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~--~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~  381 (478)
                      +|+|+++++..+|+.+.++|||||.++++|+  ...++.+.+.+++|+++|+|++++|+++++..    .++..|++|+|
T Consensus       404 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~----~~~~~e~~l~~  479 (885)
T 3b8c_A          404 DKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEK----TKESPGAPWEF  479 (885)
T ss_dssp             TCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSS----SSSCCCCCCCC
T ss_pred             cceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccc----cccccccCcEE
Confidence            9999988876677778899999999999996  34466788889999999999999999987642    23456889999


Q ss_pred             EEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCC
Q 036987          382 VGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKAD  447 (478)
Q Consensus       382 lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~  447 (478)
                      +|+++++||||||++++|+              |++.||.+||+++||.........++|.+.+..++..++++.+.+.+
T Consensus       480 lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~  559 (885)
T 3b8c_A          480 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKAD  559 (885)
T ss_dssp             CEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSC
T ss_pred             EEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCc
Confidence            9999999999999999999              99999999999999976555556677766665578888999999999


Q ss_pred             EEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987          448 GFAGLFPEHKYEIVRRLHDRKHISGMTGDGT  478 (478)
Q Consensus       448 v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv  478 (478)
                      ||||++|+||.++|+.||++|++|+|||||+
T Consensus       560 v~arv~P~~K~~iV~~lq~~g~~Vam~GDGv  590 (885)
T 3b8c_A          560 GFAGVFPEHKYEIVKKLQERKHIVGMTGDGV  590 (885)
T ss_dssp             CEECCCHHHHHHHHHHHHHTTCCCCBCCCSS
T ss_pred             EEEEECHHHHHHHHHHHHHCCCeEEEEcCCc
Confidence            9999999999999999999999999999996
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Back     alignment and structure
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Back     alignment and structure
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Back     alignment and structure
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Back     alignment and structure
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Back     alignment and structure
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Back     alignment and structure
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Back     alignment and structure
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Back     alignment and structure
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* Back     alignment and structure
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 478
d1wpga4472 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP 4e-16
d1qyia_380 c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 2e-10
d1wpga1115 b.82.7.1 (A:125-239) Calcium ATPase, transduction 3e-09
d1q3ia_214 d.220.1.1 (A:) Sodium/potassium-transporting ATPas 5e-09
d1wpga3239 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc 5e-04
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 78.2 bits (192), Expect = 4e-16
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 18/153 (11%)

Query: 26  IPIEEVFENLKC-----LTSDDVKERLNLFGYNRL-EGKKESKILKYLGCMCNPLSWVME 79
              EE            LT D VK  L  +G+N L   + +S     +    + L  ++ 
Sbjct: 7   KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66

Query: 80  AAAIMAIALAHGGGKDPDYHDF-----IGIVIIINSTTSFKEENNAGNAAAALMAQSYLR 134
            AA ++  LA     +     F     I +++I N+     +E NA NA  AL       
Sbjct: 67  LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYE--- 123

Query: 135 DGRWNEEDAAEMVPGDIISIKLGEIVSADARLV 167
                     +  P      + GE +S    L+
Sbjct: 124 ----PAATEQDKTPLQQKLDEFGEQLSKVISLI 152
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 Back     information, alignment and structure
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 Back     information, alignment and structure
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 Back     information, alignment and structure
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query478
d1wpga1115 Calcium ATPase, transduction domain A {Rabbit (Ory 99.84
d1q3ia_214 Sodium/potassium-transporting ATPase alpha chain { 99.81
d1wpga4472 Calcium ATPase, transmembrane domain M {Rabbit (Or 99.76
d1wpga3239 Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta 99.68
d1wpga2168 Calcium ATPase, catalytic domain P {Rabbit (Orycto 99.55
d1qyia_380 Hypothetical protein MW1667 (SA1546) {Staphylococc 99.52
d2b8ea1135 Cation-transporting ATPase {Archaeon Archaeoglobus 99.11
d2a29a1136 Potassium-transporting ATPase B chain, KdpB {Esche 98.6
d2b8ea2113 Cation-transporting ATPase {Archaeon Archaeoglobus 97.64
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.84  E-value=1.5e-21  Score=162.40  Aligned_cols=81  Identities=33%  Similarity=0.576  Sum_probs=74.7

Q ss_pred             EeeCCeE--EEEeCCCCCcCcEEEEcCCCeeeccEEEEec--CcEEEeccccccccccccCCceeecCCC----------
Q 036987          132 YLRDGRW--NEEDAAEMVPGDIISIKLGEIVSADARLVEG--DPLKIDRFQFCLWSALTGESLPVTKNPG----------  197 (478)
Q Consensus       132 v~r~g~~--~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g--~~~~vde~~~~~~S~LTGEs~pv~K~~~----------  197 (478)
                      |+|+|++  ++|++++|||||||.|++|++|||||+|+++  .++.+||      |+|||||.|+.|.++          
T Consensus         5 V~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vde------s~lTGEs~pv~K~~~~~~~~~~~~~   78 (115)
T d1wpga1           5 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQ------SILTGESVSVIKHTEPVPDPRAVNQ   78 (115)
T ss_dssp             EEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEEC------HHHHSCCSCEECCCSCCCCTTCCGG
T ss_pred             EEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEE------eecccceEEEEeecccccccccccc
Confidence            8999975  7899999999999999999999999999863  3689999      999999999999753          


Q ss_pred             ---CeeeeccEEeeeeEEEEEEEe
Q 036987          198 ---DGVYSGSTCKQGEIAAVVIAN  218 (478)
Q Consensus       198 ---~~v~aGt~v~~g~~~~~V~~t  218 (478)
                         +.+|+||.+.+|++.++|++|
T Consensus        79 ~~~n~lf~GT~V~~G~~~~~V~~t  102 (115)
T d1wpga1          79 DKKNMLFSGTNIAAGKALGIVATT  102 (115)
T ss_dssp             GCTTEECTTCEEEECEEEEEEEEC
T ss_pred             cccceEEeccEEEeeeEEEEEEEE
Confidence               579999999999999999999
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure