Citrus Sinensis ID: 037083

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENKLLLPSKRGSRFLAEADKNPRAADHCHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccEEEcccccHHccccccccccccEccccEEEccccccccccccccccccccEEcccccccc
Coil and Loop (DISEMBL)
MNMMKIILTIAITMAITITLTMKgigeaeennlpleqhtenklllpskrgsrflaeadknpraadhchkdnevcslfgrnstccnnkcmdlstddkncgackkkckfteaccrgqcvnlsfdkrhcgrcnnrcekgqfcvygmcdya
Flexible Loop (DISEMBL)
MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENKLLLPSKRGSRFLAEAdknpraadhchkDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLsfdkrhcgrcnnrcekgqfcVYGMCDYA
Low Complexity Region (SEG)
MNmmkiiltiaitmaititltmkGIGEAEENNLPLEQHTENKLLLPSKRGSRFLAEADKNPRAADHCHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA
Disordered region (IsUnstruct)
***MKIILTIAITMAITITLTMKGIG****************************************CHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCD**
Disordered Region (DISOPRED)
*NMMKIILTIAITMAITITLTM********************************AEADKNPRAADHCHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA
Disordered Region (DISEMBL)
MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENKLLLPSKRGSRFLAEADKNPRAADHCHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA
Disordered Region (DISPRO)
MNMMKIILTIAITMAITITLTMKG*************************GSRFLAEADKNPRAADHCHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENKLLLPSKRGSRFLAEADKNPRAADHCHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
255577125	158	conserved hypothetical protein [Ricinus	0.993	0.924	0.647	2e-49
224116424	159	predicted protein [Populus trichocarpa]	0.979	0.905	0.598	1e-45
224097963	143	predicted protein [Populus trichocarpa]	0.952	0.979	0.633	3e-45
356527079	159	PREDICTED: uncharacterized protein LOC10	0.993	0.918	0.593	6e-45
359494058	153	PREDICTED: uncharacterized protein LOC10	0.993	0.954	0.594	8e-43
449528193	163	PREDICTED: uncharacterized LOC101217149	1.0	0.901	0.515	1e-40
351723557	133	uncharacterized protein LOC100527268 [Gl	0.850	0.939	0.619	5e-38
224056363	103	predicted protein [Populus trichocarpa]	0.693	0.990	0.75	7e-38
15223631	154	stigma-specific stig1-like protein [Arab	0.965	0.922	0.470	8e-34
297792979	163	stigma-specific Stig1 family protein [Ar	0.965	0.871	0.509	2e-33

>gi|255577125|ref|XP_002529446.1| conserved hypothetical protein [Ricinus communis] gi|223531062|gb|EEF32912.1| conserved hypothetical protein [Ricinus communis]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/159 (64%), Positives = 120/159 (75%), Gaps = 13/159 (8%)

Query: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENN-LPLEQ----------HTENKLLLPSKR 49
           M +MKII  IAITMA++ITLT++ IGE E+   LP++           H E   L+PSKR
Sbjct: 1   MELMKIIFFIAITMALSITLTVRSIGEIEDKPPLPVDDSSTFSKGSAVHDEENNLMPSKR 60

Query: 50  GSRFLAEADKNPRAADHCHKDNEVCSLFG-RNSTCCNNKCMDLSTDDKNCGACKKKCKFT 108
            SRFLAE DKNPRAADHCHKD +VC   G +N TCCNNKC+DLSTDDKNCGACKKKC  T
Sbjct: 61  LSRFLAE-DKNPRAADHCHKDQDVCYYMGGKNYTCCNNKCLDLSTDDKNCGACKKKCLHT 119

Query: 109 EACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           + CCRGQCV LS DKRHCG+CNNRC  G++CV+GMC YA
Sbjct: 120 QTCCRGQCVYLSLDKRHCGKCNNRCLDGEYCVFGMCSYA 158

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116424|ref|XP_002317296.1| predicted protein [Populus trichocarpa] gi|222860361|gb|EEE97908.1| predicted protein [Populus trichocarpa]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/162 (59%), Positives = 116/162 (71%), Gaps = 18/162 (11%)

Query: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQ--------------HTENKLLLP 46
           M ++KII  IAIT A +I LTMK + E EE   P E               H E KL+ P
Sbjct: 1   MQLVKIIFVIAITTAFSIALTMKSVVEVEEKQ-PYEHSIDTSTTLSQGLIMHDEKKLM-P 58

Query: 47  SKRGSRFLAEADKNPRAADHCHKDNEVCSLF-GRNSTCCNNKCMDLSTDDKNCGACKKKC 105
           SKR SRFL E +KNPRAADHC+KDNE+C +  G+N  CC+NKCMDL+TD  NCG+CK+KC
Sbjct: 59  SKRLSRFLTE-EKNPRAADHCYKDNEICHIQQGKNHKCCSNKCMDLNTDKHNCGSCKRKC 117

Query: 106 KFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           K+TE CCRG+CV LS DKRHCGRCNNRC+ G+FCVYGMC+Y 
Sbjct: 118 KYTEDCCRGECVLLSLDKRHCGRCNNRCQDGEFCVYGMCNYP 159

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097963|ref|XP_002334580.1| predicted protein [Populus trichocarpa] gi|222873223|gb|EEF10354.1| predicted protein [Populus trichocarpa]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/150 (63%), Positives = 117/150 (78%), Gaps = 10/150 (6%)

Query: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQH--TENKLLLPSKRGSRFLAEAD 58
           M +++II  IAIT+A++ TLT+K IGE EE     +Q   T  +LL      SRFLA A+
Sbjct: 1   MQLVRIIFIIAITVALSTTLTVKRIGEDEEKPPKDDQSIDTSTRLL------SRFLA-AE 53

Query: 59  KNPRAADHCHKDNEVCSLF-GRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCV 117
           KNPRAADHC+KDNE+C +  G+N  CCNNKCMDLSTD +NCGACK+KCK+TE CCRG+CV
Sbjct: 54  KNPRAADHCNKDNEICQILQGKNYKCCNNKCMDLSTDKQNCGACKRKCKYTEDCCRGECV 113

Query: 118 NLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
            LS DKRHCG+CNNRC+KG+FCVYGMC+Y 
Sbjct: 114 LLSLDKRHCGKCNNRCQKGEFCVYGMCNYP 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527079|ref|XP_003532141.1| PREDICTED: uncharacterized protein LOC100794169 [Glycine max]

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 95/160 (59%), Positives = 110/160 (68%), Gaps = 14/160 (8%)

Query: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQH------------TENKLLLPSK 48
           M  +K I  IAITMA++I LTMK I   EE       H              N + LPSK
Sbjct: 1   MGFLKAIFVIAITMALSIALTMKTITHQEEAKPAFVHHDFPSSSSTPHDQKNNNVHLPSK 60

Query: 49  RGSRFLAEADKNPRAADHCHKDNEVCSLFG-RNSTCCNNKCMDLSTDDKNCGACKKKCKF 107
           R SRFLA+  KNP AADHCHKD+EVC+L G +NSTCCNNKC+D+  D  NCGACK KCK 
Sbjct: 61  RVSRFLAQV-KNPNAADHCHKDHEVCTLVGAKNSTCCNNKCIDVGYDYHNCGACKMKCKL 119

Query: 108 TEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           T+ACCRG+CVN +FDKRHCG CN+RCE G +CVYGMC YA
Sbjct: 120 TDACCRGECVNTNFDKRHCGECNHRCEVGAYCVYGMCGYA 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494058|ref|XP_003634714.1| PREDICTED: uncharacterized protein LOC100853410 [Vitis vinifera] gi|147784782|emb|CAN66281.1| hypothetical protein VITISV_003047 [Vitis vinifera]

 Score =  178 bits (451), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 91/153 (59%), Positives = 114/153 (74%), Gaps = 7/153 (4%)

Query: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLPL----EQHTENKLL-LPSKRGSRFLA 55
           M +MKII  IAITMA+ I+L+M  I E E+++ PL    +  T +++L +PSKR SRFLA
Sbjct: 1   MKIMKIIFMIAITMAVVISLSMTNISEKEKDSPPLHRTDDSGTSSRVLEMPSKRASRFLA 60

Query: 56  EADKNPRAADHCHKDNEVC-SLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRG 114
           E   NPRAAD C KDNEVC +  G NSTCC+NKC+ L TD K CG CK KCK+T++CCRG
Sbjct: 61  E-QANPRAADQCKKDNEVCDTSHGTNSTCCSNKCVYLQTDKKYCGTCKNKCKYTQSCCRG 119

Query: 115 QCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           QCV L  DKRHCG+CNNRC+KG  C++GMC+Y 
Sbjct: 120 QCVYLFMDKRHCGKCNNRCKKGGDCIFGMCNYG 152

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528193|ref|XP_004171090.1| PREDICTED: uncharacterized LOC101217149 [Cucumis sativus]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/163 (51%), Positives = 107/163 (65%), Gaps = 16/163 (9%)

Query: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLP---------------LEQHTENKLLL 45
           M + KI+L IA+TMA+++TLTMK    +    +                      N  L 
Sbjct: 1   MEVKKIMLVIAVTMALSVTLTMKKFENSSTTTVTEIKTDQTDTTTVVEGSSTTITNTRLE 60

Query: 46  PSKRGSRFLAEADKNPRAADHCHKDNEVCS-LFGRNSTCCNNKCMDLSTDDKNCGACKKK 104
           PS+  SRFLAE  KNPRAA HCHK+  +C  + G+   CCNNKC+DL+ D  NCG CKKK
Sbjct: 61  PSRSLSRFLAEGMKNPRAASHCHKNKHMCEKIHGKGWKCCNNKCVDLTIDKHNCGGCKKK 120

Query: 105 CKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           CK+T+ CCRGQCV+ ++DKRHCGRCNNRC +G+FCVYGMC+YA
Sbjct: 121 CKYTDECCRGQCVDFAYDKRHCGRCNNRCMRGKFCVYGMCEYA 163

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723557|ref|NP_001237283.1| uncharacterized protein LOC100527268 [Glycine max] gi|255631914|gb|ACU16324.1| unknown [Glycine max]

 Score =  162 bits (409), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 9/134 (6%)

Query: 22  MKGIGEAEENNLPLEQHT-------ENKLLLPSKRGSRFLAEADKNPRAADHCHKDNEVC 74
           MK I   EE   P   H        +  LLLPSKR SRFLA+  KNP AADHC KD+E+C
Sbjct: 1   MKTITHQEEAKPPFVHHDLPSSTPHQKNLLLPSKRVSRFLAQV-KNPNAADHCRKDHEIC 59

Query: 75  SLFG-RNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRC 133
           +L G +NSTCCNNKC+D+  D  NCGACK KCKFTE CCRG+CV+ +FDKRHCG CN+RC
Sbjct: 60  TLSGVKNSTCCNNKCIDVGYDKHNCGACKMKCKFTEVCCRGECVDTNFDKRHCGECNHRC 119

Query: 134 EKGQFCVYGMCDYA 147
           E G +CVYGMC YA
Sbjct: 120 EVGAYCVYGMCGYA 133

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056363|ref|XP_002298821.1| predicted protein [Populus trichocarpa] gi|222846079|gb|EEE83626.1| predicted protein [Populus trichocarpa]

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 78/104 (75%), Positives = 92/104 (88%), Gaps = 2/104 (1%)

Query: 45  LPSKRGSRFLAEADKNPRAADHCHKDNEVCSLF-GRNSTCCNNKCMDLSTDDKNCGACKK 103
           +PSKR SRFLA A+KNPRAADHC+KDNE+C +  G+N  CCNNKCMDLSTD +NCGACK+
Sbjct: 1   MPSKRLSRFLA-AEKNPRAADHCNKDNEICQILQGKNYKCCNNKCMDLSTDKQNCGACKR 59

Query: 104 KCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           KCK+TE CCRG+CV LS DKRHCG+CNNRC+KG+FCVYGMC+Y 
Sbjct: 60  KCKYTEDCCRGECVLLSLDKRHCGKCNNRCQKGEFCVYGMCNYP 103

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223631|ref|NP_175487.1| stigma-specific stig1-like protein [Arabidopsis thaliana] gi|12321436|gb|AAG50782.1|AC079027_5 hypothetical protein [Arabidopsis thaliana] gi|67633446|gb|AAY78647.1| stigma-specific Stig1 family protein [Arabidopsis thaliana] gi|332194462|gb|AEE32583.1| stigma-specific stig1-like protein [Arabidopsis thaliana]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 102/151 (67%), Gaps = 9/151 (5%)

Query: 3   MMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENKLLLPSKRGSRFLAEADKNPR 62
           ++ I+LTI+I + + I        + E     L+ HT+ + L+ + R SRFLA+  KN R
Sbjct: 7   VLTILLTISIAIMVLIATVFVSNNKTET---LLQTHTQTQTLITTGRVSRFLAQNAKNGR 63

Query: 63  ---AADHCHKDNEVC---SLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQC 116
              AADHC+K+ E+C    ++     CC+NKC+DL+ D+ NCGACK +CKFT+ CCRG+C
Sbjct: 64  NLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGEC 123

Query: 117 VNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           V L++DKRHCG CN+ C  G+FCVYG+C+YA
Sbjct: 124 VYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792979|ref|XP_002864374.1| stigma-specific Stig1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297310209|gb|EFH40633.1| stigma-specific Stig1 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/163 (50%), Positives = 103/163 (63%), Gaps = 21/163 (12%)

Query: 3   MMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENKLLLPSK----RGSRFLAEA- 57
            MK+++TIA+T   T+ +      +              K L P      R SRFLAE  
Sbjct: 4   FMKLLVTIALT---TVVIIAIITTKTTTKTATFALEDPFKDLTPPGTIKIRPSRFLAEKV 60

Query: 58  -------DKNPRAADHCHKDNEVCSL----FGRNST--CCNNKCMDLSTDDKNCGACKKK 104
                   +NP AADHC+KDNE+CS      G N+T  CCNNKCMDLSTDDKNCGACK K
Sbjct: 61  DQGKGPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGACKNK 120

Query: 105 CKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
           CKF + CCRGQCV +++DKRHCG CN+RC+ G+FCVYG+C+YA
Sbjct: 121 CKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2161605	163	AT5G55110 "AT5G55110" [Arabido	0.673	0.607	0.654	4.3e-38
TAIR|locus:2015863	154	AT1G50720 "AT1G50720" [Arabido	0.768	0.733	0.571	2.1e-36
TAIR|locus:2116407	152	AT4G26880 "AT4G26880" [Arabido	0.693	0.671	0.581	3.5e-36
TAIR|locus:504956323	140	AT1G11925 "AT1G11925" [Arabido	0.551	0.578	0.524	1.1e-23
TAIR|locus:2008006	174	AT1G50650 "AT1G50650" [Arabido	0.442	0.373	0.461	2.3e-16
TAIR|locus:2037037	168	GRI "GRIM REAPER" [Arabidopsis	0.659	0.577	0.339	2e-15
DICTYBASE|DDB_G0272530	301	DDB_G0272530 "unknown" [Dictyo	0.482	0.235	0.312	0.00033

TAIR|locus:2161605 AT5G55110 "AT5G55110" [Arabidopsis thaliana (taxid:3702)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 74/113 (65%), Positives = 86/113 (76%)

Query:    49 RGSRFLAE-ADK-------NPRAADHCHKDNEVCSLF----GRNST--CCNNKCMDLSTD 94
             R SRFLAE  DK       NP AADHC+KDNE+CS      G N+T  CCNNKCMDLSTD
Sbjct:    51 RPSRFLAEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTD 110

Query:    95 DKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
             DKNCG CK KCKF + CCRGQCV +++DKRHCG CN+RC+ G+FCVYG+C+YA
Sbjct:   111 DKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2015863 AT1G50720 "AT1G50720" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 68/119 (57%), Positives = 90/119 (75%)

Query:    35 LEQHTENKLLLPSKRGSRFLAEADKNPR---AADHCHKDNEVCSLFGR-NST--CCNNKC 88
             L+ HT+ + L+ + R SRFLA+  KN R   AADHC+K+ E+C   G  NST  CC+NKC
Sbjct:    36 LQTHTQTQTLITTGRVSRFLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKC 95

Query:    89 MDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
             +DL+ D+ NCGACK +CKFT+ CCRG+CV L++DKRHCG CN+ C  G+FCVYG+C+YA
Sbjct:    96 VDLAYDNDNCGACKNQCKFTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2116407 AT4G26880 "AT4G26880" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 64/110 (58%), Positives = 88/110 (80%)

Query:    46 PSKRGSRFLAE---ADKNPRAADHCHKDNEVCSLFG---RNST--CCNNKCMDLSTDDKN 97
             P+ R +R LA+    ++NP AADHC+++ E+C+ +G    NST  CCNNKC+D+S+DD N
Sbjct:    43 PTIRPNRLLAQKEVGERNPNAADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNN 102

Query:    98 CGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
             CGACK KCKF++ CCRGQCV +++DKRHCG+CN+ CE G+FCVYG+C+YA
Sbjct:   103 CGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504956323 AT1G11925 "AT1G11925" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 43/82 (52%), Positives = 54/82 (65%)

Query:    67 CHKDNEVCSLFGR-NSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRH 125
             C K ++VC L G     CC  KC+DL T+  NCG C K C+++E CC G CVN  FD+RH
Sbjct:    59 CDKSSKVCRLKGSPGRNCCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDRRH 118

Query:   126 CGRCNNRCEKGQFCVYGMCDYA 147
             CG C  +C+KG+ C YGMC YA
Sbjct:   119 CGGCFKKCKKGRSCAYGMCSYA 140

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2008006 AT1G50650 "AT1G50650" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 30/65 (46%), Positives = 42/65 (64%)

Query:    83 CCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYG 142
             CC N+C+D+ +D  +C  C K C+F  +CC G CV+ + D  +CG+C N CE G  C +G
Sbjct:    74 CCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFG 133

Query:   143 MCDYA 147
             MC YA
Sbjct:   134 MCGYA 138

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2037037 GRI "GRIM REAPER" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 35/103 (33%), Positives = 49/103 (47%)

Query:    51 SRFLAEADKNPRAADHCHKDN-EVCSLFGRNST-----CCNNKCMDLSTDDKNCGACKKK 104
             +R L    K  +    CH ++  +C+    N       CC   C ++  D  NCG C  K
Sbjct:    66 TRLLVSHYKKIKKGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHK 125

Query:   105 CKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147
             C F + CC G C  ++F+  HCG+C  +C  G  C YG C YA
Sbjct:   126 CGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168

GO:0005576 "extracellular region" evidence=ISM

GO:0005615 "extracellular space" evidence=IDA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IMP

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IMP

GO:0010193 "response to ozone" evidence=IMP

GO:0010942 "positive regulation of cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0080141 "regulation of jasmonic acid biosynthetic process" evidence=IMP

GO:0080142 "regulation of salicylic acid biosynthetic process" evidence=IMP

DICTYBASE|DDB_G0272530 DDB_G0272530 "unknown" [Dictyostelium discoideum (taxid:44689)]

 Score = 95 (38.5 bits), Expect = 0.00033, P = 0.00033
 Identities = 25/80 (31%), Positives = 34/80 (42%)

Query:    65 DHCHKDNEVCSLFGRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKR 124
             D C ++   CS    +S C   KC   S     C A   +CKF   C  G+CV L  +  
Sbjct:    97 DACDENKSYCS----SSVCIKGKC---SIQGDVCTA-NNQCKFNNYCKSGKCVPLEKEGS 148

Query:   125 HCGRCNNRCEKGQFCVYGMC 144
              C + ++ C     CV G C
Sbjct:   149 SCDK-DSSCSLTNACVGGKC 167

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XI000478 hypothetical protein (159 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
pfam04885	136	pfam04885, Stig1, Stigma-specific protein, Stig1	2e-42

>gnl|CDD|218310 pfam04885, Stig1, Stigma-specific protein, Stig1

 Score =  136 bits (345), Expect = 2e-42
 Identities = 61/142 (42%), Positives = 89/142 (62%), Gaps = 11/142 (7%)

Query: 11  AITMAITITLTMKGIGEAEENNLPLE-QHTENKLLLPSKRGSRFLAEADKNPR-AADHCH 68
            +T+ + ++LT+  I  +      L   +      L + + S       + PR  ADHC+
Sbjct: 1   LLTILLALSLTIAAISTSSPTTDTLSTTNDYTSSALAAAKNS------PRPPRLLADHCN 54

Query: 69  KDNEVCSLFGRNS---TCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFDKRH 125
           KD E+C   G  S   TCC NKC+D+STD  NCG+C KKCKF + CC GQCV+L+FD+R+
Sbjct: 55  KDPEICKTSGGLSPGMTCCRNKCVDVSTDRNNCGSCGKKCKFGQTCCGGQCVDLNFDRRN 114

Query: 126 CGRCNNRCEKGQFCVYGMCDYA 147
           CG+CNN+C+ G+ CV+G+C+YA
Sbjct: 115 CGKCNNKCKSGEKCVFGLCNYA 136

This family represents the Stig1 cysteine rich plant protein. The STIG1 gene is developmentally regulated and expressed specifically in the stigmatic secretory zone. Length = 136

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
PF04885	136	Stig1: Stigma-specific protein, Stig1; InterPro: I	100.0
PF04885	136	Stig1: Stigma-specific protein, Stig1; InterPro: I	99.25
PF02950	75	Conotoxin: Conotoxin; InterPro: IPR004214 Cone sna	89.81
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	88.96

>PF04885 Stig1: Stigma-specific protein, Stig1; InterPro: IPR006969 This family represents the Stig1 cysteine rich plant protein

Probab=100.00  E-value=1.4e-37  Score=240.00  Aligned_cols=94  Identities=59%  Similarity=1.241  Sum_probs=89.0

Q ss_pred             CCCCCcchhhhhccCCccccccccccccccCc---CccccccCccccccccCCCcchhcccCCCCCccccCCccccCccC
Q 037083           46 PSKRGSRFLAEADKNPRAADHCHKDNEVCSLF---GRNSTCCNNKCMDLSTDDKNCGACKKKCKFTEACCRGQCVNLSFD  122 (147)
Q Consensus        46 ~~~r~srfLa~~~~~~~~~~~C~~~~~iC~~~---~~g~~cC~~~Cvd~~tD~~NCG~Cg~~C~~g~~CC~G~Cvdl~~D  122 (147)
                      .+.+++|||++        ++|+++|+||..+   ++|++||+++|||+.+|++|||+||++|+++++||+|+|||+.+|
T Consensus        40 ~~~~~~~~~~~--------~~C~~~~~iC~~~~~~~~~~~CC~~~Cvdv~~d~~nCG~Cg~~C~~g~~cC~G~Cvd~~~d  111 (136)
T PF04885_consen   40 VSSRPSRFLAH--------DTCNKDPWICSAKGKCSPGPTCCNNKCVDVSSDRNNCGACGNKCPYGQTCCGGQCVDLNSD  111 (136)
T ss_pred             ccCCccccccc--------cccCCCchhhcCCCCCCCCCcccCCcCCccCCCccccHhhcCCCCCCceecCCEeECCCCC
Confidence            34567788866        8999999999999   789999999999999999999999999999999999999999999


Q ss_pred             CCcchhcCcCCCCCCccCCceecCC
Q 037083          123 KRHCGRCNNRCEKGQFCVYGMCDYA  147 (147)
Q Consensus       123 ~~nCG~Cg~~C~~g~~C~~G~C~ya  147 (147)
                      ++|||+||++|+.|+.|++|+|.||
T Consensus       112 ~~~CG~Cg~~C~~G~~C~~G~C~ya  136 (136)
T PF04885_consen  112 PRHCGACGNKCPPGQKCVYGMCGYA  136 (136)
T ss_pred             ccccCCCCCcCCCcCCcCCeECCCC
Confidence            9999999999999999999999998

The tobacco stigma-specific gene, STIG1 is developmentally regulated and expressed specifically in the stigmatic secretory zone. Pistils of transgenic STIG1-barnase tobacco plants undergo normal development, but lack the stigmatic secretory zone and are female sterile. Pollen grains are unable to penetrate the surface of the ablated pistils. Application of stigmatic exudate from wild-type pistils to the ablated surface increases the efficiency of pollen tube germination and growth and restores the capacity of pollen tubes to penetrate the style []. The function of STIG1 is unknown.

>PF04885 Stig1: Stigma-specific protein, Stig1; InterPro: IPR006969 This family represents the Stig1 cysteine rich plant protein

Probab=99.25  E-value=9.8e-12  Score=96.41  Aligned_cols=52  Identities=40%  Similarity=0.905  Sum_probs=47.6

Q ss_pred             CCCcchhcccCCCCCccccCCccccCccCCCcchhcCcCCCCCCccCCceecC
Q 037083           94 DDKNCGACKKKCKFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDY  146 (147)
Q Consensus        94 D~~NCG~Cg~~C~~g~~CC~G~Cvdl~~D~~nCG~Cg~~C~~g~~C~~G~C~y  146 (147)
                      ++.-|..-+ ....+.+||+++|||+.+|++|||.||++|+.|+.|..|.|++
T Consensus        56 ~~~iC~~~~-~~~~~~~CC~~~Cvdv~~d~~nCG~Cg~~C~~g~~cC~G~Cvd  107 (136)
T PF04885_consen   56 DPWICSAKG-KCSPGPTCCNNKCVDVSSDRNNCGACGNKCPYGQTCCGGQCVD  107 (136)
T ss_pred             CchhhcCCC-CCCCCCcccCCcCCccCCCccccHhhcCCCCCCceecCCEeEC
Confidence            666777777 7788999999999999999999999999999999999999975

The tobacco stigma-specific gene, STIG1 is developmentally regulated and expressed specifically in the stigmatic secretory zone. Pistils of transgenic STIG1-barnase tobacco plants undergo normal development, but lack the stigmatic secretory zone and are female sterile. Pollen grains are unable to penetrate the surface of the ablated pistils. Application of stigmatic exudate from wild-type pistils to the ablated surface increases the efficiency of pollen tube germination and growth and restores the capacity of pollen tubes to penetrate the style []. The function of STIG1 is unknown.

>PF02950 Conotoxin: Conotoxin; InterPro: IPR004214 Cone snail toxins, conotoxins, are small neurotoxic peptides with disulphide connectivity that target ion-channels or G-protein coupled receptors

Probab=89.81  E-value=0.17  Score=34.12  Aligned_cols=23  Identities=35%  Similarity=0.920  Sum_probs=13.0

Q ss_pred             cccccccccccCcCccccccCcccc
Q 037083           65 DHCHKDNEVCSLFGRNSTCCNNKCM   89 (147)
Q Consensus        65 ~~C~~~~~iC~~~~~g~~cC~~~Cv   89 (147)
                      ..|......|..  .+..||++.|.
T Consensus        48 ~~C~~~g~~C~~--~~~~CC~~~C~   70 (75)
T PF02950_consen   48 RRCTPPGSYCCK--RNSECCSGSCN   70 (75)
T ss_dssp             --EB-TTSB-BT--TTTCBSSSCEE
T ss_pred             cccCCCCCcCCC--CCCCCCCCccC
Confidence            467777777822  25679988876

Based on the number and pattern of disulphide bonds and biological activities, conotoxins can be classified into several families []. Omega, delta and kappa families of conotoxins have a knottin or inhibitor cysteine knot scaffold. The knottin scaffold is a very special disulphide-through-disulphide knot, in which the III-VI disulphide bond crosses the macrocycle formed by two other disulphide bonds (I-IV and II-V) and the interconnecting backbone segments, where I-VI indicates the six cysteine residues starting from the N terminus. The disulphide bonding network, as well as specific amino acids in inter-cysteine loops, provide the specificity of conotoxins []. The cysteine arrangements are the same for omega, delta and kappa families, even though omega conotoxins are calcium channel blockers, whereas delta conotoxins delay the inactivation of sodium channels, and kappa conotoxins are potassium channel blockers []. Mu conotoxins have two types of cysteine arrangements, but the knottin scaffold is not observed. Mu conotoxins target the voltage-gated sodium channels [], and are useful probes for investigating voltage-dependent sodium channels of excitable tissues []. Alpha conotoxins have two types of cysteine arrangements [], and are competitive nicotinic acetylcholine receptor antagonists. ; GO: 0008200 ion channel inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 2EFZ_A 1FYG_A 1RMK_A 1DG0_A 1DFY_A 1DFZ_A 2JQC_A 2YYF_A 2JQB_A 1F3K_A ....

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=88.96  E-value=0.36  Score=35.38  Aligned_cols=21  Identities=19%  Similarity=0.335  Sum_probs=12.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHhh
Q 037083            1 MNMMKIILTIAITMAITITLTM   22 (147)
Q Consensus         1 m~~~k~~~~l~i~~al~~~~~~   22 (147)
                      |. -|+|++|+|+||+++.+|+
T Consensus         1 Ma-SK~~llL~l~LA~lLlisS   21 (95)
T PF07172_consen    1 MA-SKAFLLLGLLLAALLLISS   21 (95)
T ss_pred             Cc-hhHHHHHHHHHHHHHHHHh
Confidence            55 4566666666666655554

Some of them may be involved in resistance to environmental stress [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
1hvw_A	26	Omega-ACTX-HV1A, omega-atracotoxin-HV1A; cystine k	81.76

>1hvw_A Omega-ACTX-HV1A, omega-atracotoxin-HV1A; cystine knot, beta-hairpin; NMR {Synthetic} SCOP: g.3.6.2

Probab=81.76  E-value=0.62  Score=26.34  Aligned_cols=19  Identities=26%  Similarity=0.857  Sum_probs=13.2

Q ss_pred             ccCCCCCccccCCccccCc
Q 037083          102 KKKCKFTEACCRGQCVNLS  120 (147)
Q Consensus       102 g~~C~~g~~CC~G~Cvdl~  120 (147)
                      |..|++.+.||.|.|++-.
T Consensus         5 gq~Cp~~e~CCSGsCt~~~   23 (26)
T 1hvw_A            5 GQPCPYNENCCSQSCTGGR   23 (26)
T ss_dssp             TSBCSSTTSBSSCCEETTE
T ss_pred             CCcCCCCcccccccccccc
Confidence            4567777778887777643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1jlza_	26	alpha-KTX, K+-channel blocker {Scorpion (Tityus ca	85.54

>d1jlza_ g.3.7.2 (A:) alpha-KTX, K+-channel blocker {Scorpion (Tityus cambridgei) [TaxId: 184226]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Scorpion toxin-like
family: Short-chain scorpion toxins
domain: alpha-KTX, K+-channel blocker
species: Scorpion (Tityus cambridgei) [TaxId: 184226]

Probab=85.54  E-value=0.043  Score=29.41  Aligned_cols=20  Identities=35%  Similarity=1.182  Sum_probs=14.7

Q ss_pred             chhcCcCCCCCCccCCceec
Q 037083          126 CGRCNNRCEKGQFCVYGMCD  145 (147)
Q Consensus       126 CG~Cg~~C~~g~~C~~G~C~  145 (147)
                      ||+|-++|+....|.+|.|.
T Consensus         2 cgscrkkckgsgkcingrck   21 (26)
T d1jlza_           2 CGSCRKKCKGSGKCINGRCK   21 (26)
T ss_dssp             CSSHHHHTTSSEEEETTEEE
T ss_pred             ccchhhhcCCCCceECCcee
Confidence            77777777777777777774