Citrus Sinensis ID: 037150

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
Protein Sequence
MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRIYHRGSKSKRADQASEEDQYHGDDQSVDQPIQLNPNINELVVISREYNNPSMEMEKPPSILPQEGQSFVEISQSGNPMQNNAIATNTQYANPSHDNTLANDNVAANFTQHADPSQNNSLDPNAFVSAMQFSSDIPYNYANASSLDNMHHQLPLQSGFLEIAQPSNSMIAMDAELQAFAVITESLLSPLPQASVYPFKSSYARNDPLWMPTLPEFQNDF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHccccccEEEEccccccccccccccccccccccEEccccccccEEEccEEEEEEEEEEEEccccccccccccEEEEccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEccccccccccHHHccccccEEEEEccccccccccccccccccccccEEEcccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHHHccccccccccccccccccccHHHcccccccccccccccccccccccHHHHHHHHcccc
Coil and Loop (DISEMBL)
mneplppnrimdvqlykfsPAQLEVMYKKRREKEMFFFtqrdrkhqngsrpnrvtgdssgfwkatsgdkevkfngeiigFKKTLAFYKrtsnstekTNWIMHEfraednpppskkhgidmkldWVLCRIyhrgskskradqaseedqyhgddqsvdqpiqlnpniNELVVISReynnpsmemekppsilpqegqsfveisqsgnpmqnnaiatntqyanpshdntlandnvaanftqhadpsqnnsldpnaFVSAMqfssdipynyanassldnmhhqlplqsgfleiaqpsnsmIAMDAELQAFAVITEsllsplpqasvypfkssyarndplwmptlpefqndf
Flexible Loop (DISEMBL)
mneplppnrimdvqlykFSPAQLEVMYKKRREKEMFfftqrdrkhqngsrpnrvtgdssgfwkatsgdkevkfngeiigfkktlafykrtsnsteKTNWIMHEFraednpppskkHGIDMKLDWVLCRIYHRGSKSKRADQASEEDQYHGddqsvdqpiqlnpnINELVVISREYNNPSMEMEKPPSILPQEGQSFVEISQSGNPMQNNAIATNTQYANPSHDNTLANDNVAANFTQHADPSQNNSLDPNAFVSAMQFSSDIPYNYANASSLDNMHHQLPLQSGFLEIAQPSNSMIAMDAELQAFAVITESLLSPLPQASVYPFKSSYARNDPLWMPTLPEFQNDF
Low Complexity Region (SEG)
MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRIYHRGSKSKRADQASEEDQYHGDDQSVDQPIQLNPNINELVVISREYNNPSMEMEKPPSILPQEGQSFVEISQSGNPMQNNAIATNTQYANPSHDNTLANDNVAANFTQHADPSQNNSLDPNAFVSAMQFSSDIPYNYANASSLDNMHHQLPLQSGFLEIAQPSNSMIAMDAELQAFAVITESLLSPLPQASVYPFKSSYARNDPLWMPTLPEFQNDF
Disordered region (IsUnstruct)
**********MDVQLYKFSPAQLEVMYKK****EMFFF**********************FWKAT*GDKEVKFNGEIIGFKKTLAFYKRTSN**EKTNWIMHE*************GIDMKLDWVLCRIYH*********************************INELVVI*****************************************************************************************DIPYNYAN********HQLPLQSGFLEIAQPSNSMIAMDAELQAFAVITESLLSPLPQASVYPFKSSYARNDPLW***********
Disordered Region (DISOPRED)
****LPP*RIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAE***************DWVLCRIYH*******************************************************************************************************************************SSDIPYNYANA************************************AVITESLLSPLP**SVYPFKSSYARNDPLWMPTLP******
Disordered Region (DISEMBL)
MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQR**************GDSSGFWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRIYHR********************QSVDQPIQLNPNINELVVISREYNNPSMEMEKPPSILPQEGQSFVEISQSGNPMQNNAIATNTQYANPSHDNTLANDNVAANFTQHADPSQNNSLDPNAFVSAMQFSSDIPYNYANASSLDNMHHQLPLQSGFLEIAQPSNSMIAMDAELQAFAVITESLLSPLPQASVYPFKSSYARNDPLWMPTLPEFQNDF
Disordered Region (DISPRO)
**EPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPP*****IDMKLDWVLCRIYHRGS*************************************************K*PSI***E***F************************************************NSLDPNAFVSAMQFSSDIPYNYANASSLDNMHHQLPLQSGFLEIAQPSNSMIAMDAELQAFAVI*********QASVYPFKSSYARNDPLWMPTLPEFQNDF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRIYHRGSKSKRADQASEEDQYHGDDQSVDQPIQLNPNINELVVISREYNNPSMEMEKPPSILPQEGQSFVEISQSGNPMQNNAIATNTQYANPSHDNTLANDNVAANFTQHADPSQNNSLDPNAFVSAMQFSSDIPYNYANASSLDNMHHQLPLQSGFLEIAQPSNSMIAMDAELQAFAVITESLLSPLPQASVYPFKSSYARNDPLWMPTLPEFQNDF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	346	2.2.26 [Sep-21-2011]
Q93VY3	297	NAC domain-containing pro	yes	no	0.349	0.407	0.488	5e-27
A0SPJ4	405	NAC transcription factor	N/A	no	0.502	0.429	0.368	2e-25
Q9C932	317	NAC domain-containing pro	no	no	0.349	0.381	0.465	2e-25
Q9LDY8	317	NAC domain-containing pro	no	no	0.349	0.381	0.458	3e-25
A0SPJ9	402	NAC transcription factor	N/A	no	0.390	0.335	0.434	4e-25
A0SPJ6	396	NAC transcription factor	N/A	no	0.390	0.340	0.434	4e-25
A2YMR0	425	NAC transcription factor	N/A	no	0.398	0.324	0.403	7e-25
Q8H4S4	425	NAC transcription factor	yes	no	0.398	0.324	0.409	1e-24
A0SPJ3	405	NAC transcription factor	N/A	no	0.502	0.429	0.373	1e-24
Q39013	289	NAC domain-containing pro	no	no	0.433	0.519	0.395	3e-24

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score =  122 bits (305), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 82/131 (62%), Gaps = 10/131 (7%)

Query: 10  IMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSG 67
           I D+ LYKF P  L  + ++    EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  
Sbjct: 46  IGDIDLYKFDPWDLPSKALFG---EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGT 100

Query: 68  DKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLC 127
           DK +  +G  +G KK L FY   +    KTNWIMHE+R  ++   S+ HG     DWVLC
Sbjct: 101 DKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEH---SRSHGSSKLDDWVLC 157

Query: 128 RIYHRGSKSKR 138
           RIY + S S+R
Sbjct: 158 RIYKKTSGSQR 168

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.
Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  117 bits (292), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 101/198 (51%), Gaps = 24/198 (12%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP N I +V LYKF P +L        E+E +FF+ RDRK+ NG+RPNR    +SG+WK
Sbjct: 60  PLPVNIIAEVDLYKFDPWELPEK-ATIGEQEWYFFSPRDRKYPNGARPNRAA--TSGYWK 116

Query: 64  ATSGDKEVKFNG-------EIIGFKKTLAFYKRTSNSTEKTNWIMHEFR---------AE 107
           AT  DK +  +G       E +G KK L FY+       KTNWIMHE+R         A 
Sbjct: 117 ATGTDKPILASGTGCGLVREKLGVKKALVFYRGKPPKGLKTNWIMHEYRLTDASGSTTAT 176

Query: 108 DNPPP---SKKHGIDMKL-DWVLCRIYHRGSKSKRAD-QASEEDQYHGDDQSVDQPIQLN 162
           + PPP     +    ++L DWVLCRIY + +K+   D Q + E +   +D     P+   
Sbjct: 177 NRPPPVTGGSRAAASLRLDDWVLCRIYKKINKAAAGDQQRNTECEDSVEDAVTAYPLYAT 236

Query: 163 PNINELVVISREYNNPSM 180
             +         Y +PS+
Sbjct: 237 AGMTGAGAHGSNYASPSL 254

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 83/131 (63%), Gaps = 10/131 (7%)

Query: 10  IMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSG 67
           I ++ LYKF P  L  + ++    EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  
Sbjct: 46  IAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGT 100

Query: 68  DKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLC 127
           DK +   G+ +G KK L FY   +    KTNWIMHE+R  +   PS+++G     DWVLC
Sbjct: 101 DKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 157

Query: 128 RIYHRGSKSKR 138
           RIY + S +++
Sbjct: 158 RIYKKQSSAQK 168

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 10/131 (7%)

Query: 10  IMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSG 67
           I ++ LYKF P  L  + ++    EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  
Sbjct: 46  IAEIDLYKFDPWVLPSKALFG---EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGT 100

Query: 68  DKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLC 127
           DK +   G  +G KK L FY   +    KTNWIMHE+R  +   PS+++G     DWVLC
Sbjct: 101 DKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 157

Query: 128 RIYHRGSKSKR 138
           RIY + + +++
Sbjct: 158 RIYKKQTSAQK 168

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 85/152 (55%), Gaps = 17/152 (11%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP   I +V LYKF P +L        E+E +FF+ RDRK+ NG+RPNR    +SG+WK
Sbjct: 54  PLPVTIIAEVDLYKFDPWELPEK-ATFGEQEWYFFSPRDRKYPNGARPNRAA--TSGYWK 110

Query: 64  ATSGDKEVKFNG---EIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAED--------NPPP 112
           AT  DK +  +G   E +G K  L FY+       KTNWIMHE+R  D         PPP
Sbjct: 111 ATGTDKPILASGCGREKVGVKXALVFYRGKPPKGLKTNWIMHEYRLTDASSSAATSRPPP 170

Query: 113 --SKKHGIDMKL-DWVLCRIYHRGSKSKRADQ 141
                    ++L DWVLCRIY + +K+  ADQ
Sbjct: 171 VTGGSRAASLRLDDWVLCRIYKKINKAAAADQ 202

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 85/152 (55%), Gaps = 17/152 (11%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP   I +V LYKF P +L        E+E +FF+ RDRK+ NG+RPNR    +SG+WK
Sbjct: 54  PLPVTIITEVDLYKFDPWELPEK-ATFGEQEWYFFSPRDRKYPNGARPNRAA--TSGYWK 110

Query: 64  ATSGDKEVKFNG---EIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAED--------NPPP 112
           AT  DK +  +G   E +G KK L FY+       KTNWIMHE+R  D         PPP
Sbjct: 111 ATGTDKPILASGCGREKVGVKKALVFYRGKPPKGLKTNWIMHEYRLTDASSSATTSRPPP 170

Query: 113 --SKKHGIDMKL-DWVLCRIYHRGSKSKRADQ 141
                    ++L DWVLCRIY + +K+   DQ
Sbjct: 171 VTGGSRSASLRLDDWVLCRIYKKINKAAAGDQ 202

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  115 bits (287), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 23/161 (14%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP   I +V LYKF P +L        E+E +FF+ RDRK+ NG+RPNR    +SG+WK
Sbjct: 55  PLPVTIIAEVDLYKFDPWELPEK-ANFGEQEWYFFSPRDRKYPNGARPNRAA--TSGYWK 111

Query: 64  ATSGDKEVKFNG---EIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDN----------- 109
           AT  DK +  +G   E +G KK L FY+       KTNWIMHE+R  D            
Sbjct: 112 ATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTR 171

Query: 110 -PPP----SKKHGIDMKL-DWVLCRIYHRGSKSKRADQASE 144
            PPP      +  + ++L DWVLCRIY + +K+    ++ E
Sbjct: 172 QPPPPITGGSRGAVSLRLDDWVLCRIYKKTNKAGAGQRSME 212

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 23/161 (14%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP   I +V LYKF P  L        E+E +FF+ RDRK+ NG+RPNR    +SG+WK
Sbjct: 55  PLPVTIIAEVDLYKFDPWDLPEK-ANFGEQEWYFFSPRDRKYPNGARPNRAA--TSGYWK 111

Query: 64  ATSGDKEVKFNG---EIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDN----------- 109
           AT  DK +  +G   E +G KK L FY+       KTNWIMHE+R  D            
Sbjct: 112 ATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTR 171

Query: 110 -PPP----SKKHGIDMKL-DWVLCRIYHRGSKSKRADQASE 144
            PPP      K  + ++L DWVLCRIY + +K+    ++ E
Sbjct: 172 RPPPPITGGSKGAVSLRLDDWVLCRIYKKTNKAGAGQRSME 212

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 99/198 (50%), Gaps = 24/198 (12%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP   I +V LYKF P +L        E+E +FF+ RDRK+ NG+RPNR    +SG+WK
Sbjct: 59  PLPVTIIAEVDLYKFDPWELPEK-ATFGEQEWYFFSPRDRKYPNGARPNRAA--TSGYWK 115

Query: 64  ATSGDKEVKFNG-------EIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAED-------- 108
           AT  DK +  +G       E +G KK L FY+       KTNWIMHE+R  D        
Sbjct: 116 ATGTDKPILASGTGCGLVREKLGVKKALVFYRGKPPKGLKTNWIMHEYRLTDVSGSTTTS 175

Query: 109 NPPPSKKHG----IDMKL-DWVLCRIYHRGSKSKRAD-QASEEDQYHGDDQSVDQPIQLN 162
            PPP    G      ++L DWVLCRIY + +K+   D Q S E +   +D     P+   
Sbjct: 176 RPPPPVTGGSRAAASLRLDDWVLCRIYKKINKAAAGDQQRSTECEDSVEDAVTAYPLYAT 235

Query: 163 PNINELVVISREYNNPSM 180
             +         Y +PS+
Sbjct: 236 AGMAGAGAHGSNYASPSL 253

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  112 bits (281), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 12/162 (7%)

Query: 10  IMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDK 69
           I ++ LYK+ P +L  +     EKE +FF+ RDRK+ NGSRPNR  G  SG+WKAT  DK
Sbjct: 39  IAEIDLYKYDPWELPGL-ALYGEKEWYFFSPRDRKYPNGSRPNRSAG--SGYWKATGADK 95

Query: 70  EVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKL-DWVLCR 128
            +    + +G KK L FY   +   EKTNWIMHE+R  D     +K    ++L DWVLCR
Sbjct: 96  PIGLP-KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCR 154

Query: 129 IYHRGSKSKRADQASEEDQYHGDDQSVDQPIQLNPNINELVV 170
           IY++   ++R  +       +GD+      ++  P + E+V+
Sbjct: 155 IYNKKGATER--RGPPPPVVYGDEI-----MEEKPKVTEMVM 189

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
224143770	432	NAC domain protein, IPR003441 [Populus t	0.604	0.483	0.399	1e-31
224106189	513	NAC domain protein, IPR003441 [Populus t	0.404	0.272	0.475	3e-31
224106187	386	NAC domain protein, IPR003441 [Populus t	0.375	0.336	0.481	2e-30
297746301	364	unnamed protein product [Vitis vinifera]	0.407	0.387	0.452	3e-30
225435399	406	PREDICTED: uncharacterized protein LOC10	0.459	0.391	0.442	4e-30
255544902	522	conserved hypothetical protein [Ricinus	0.468	0.310	0.421	1e-27
147789356	330	hypothetical protein VITISV_034302 [Viti	0.395	0.415	0.432	2e-27
359478725	366	PREDICTED: NAC domain-containing protein	0.540	0.510	0.405	5e-27
224054978	441	NAC domain protein, IPR003441 [Populus t	0.407	0.319	0.414	1e-26
116784797	324	unknown [Picea sitchensis]	0.520	0.555	0.405	1e-25

>gi|224143770|ref|XP_002325069.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222866503|gb|EEF03634.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 128/228 (56%), Gaps = 19/228 (8%)

Query: 2   NEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGF 61
           N PLP N I +V LYK++P  L   Y+   EKE +F T RDRK+ NG RPNR  GD  G+
Sbjct: 63  NRPLPRNGIHEVTLYKYNPETLAENYEPYGEKEWYFLTPRDRKYPNGDRPNRAAGD--GY 120

Query: 62  WKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMK 121
           WKAT  D +V    ++IG KKTL FY+  +    KTNWIMHE+RA ++    K+    M+
Sbjct: 121 WKATGADTDVISANQVIGSKKTLVFYRGKAPGGGKTNWIMHEYRARNSDGAPKRTNDGMR 180

Query: 122 LD-WVLCRIYHR--GSKSKRADQASEEDQYHGDDQSVDQPIQLNPNI--NELVVIS-REY 175
           LD WVLCRI++R  G  + R +          DD+  DQP + N N+   ++VV    EY
Sbjct: 181 LDEWVLCRIHNRTDGPPTNRINGLQ-------DDEIEDQPSENNGNLVPQQVVVHGISEY 233

Query: 176 NNPSMEMEKPPSILPQEGQSFVEISQSG---NPMQNNAI-ATNTQYAN 219
           +NP  ++    +       +F + SQ+G      QN+A+ ++NT   N
Sbjct: 234 HNPGSQLGYLDTSYGNSVSAFPQNSQNGLVVGVSQNHAVYSSNTVTGN 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106189|ref|XP_002314078.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222850486|gb|EEE88033.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/145 (47%), Positives = 94/145 (64%), Gaps = 5/145 (3%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP N+I+DV LY++ P  L   Y+K  EKE +FFT RDRK++NGSRPNR    + G+WK
Sbjct: 134 PLPRNKIVDVILYQYDPEYLADRYQKFGEKEWYFFTPRDRKYKNGSRPNRAA--NGGYWK 191

Query: 64  ATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLD 123
           AT  DK +  +  ++G++K L +Y   +   +KTNWIMHEFR  +  P  + H  DM+LD
Sbjct: 192 ATGADKNITHDEAVVGYRKALVYYTGKAPKGDKTNWIMHEFRVNEPIPQVRNHRDDMRLD 251

Query: 124 -WVLCRIYHRGSKSK--RADQASEE 145
            WVLCRIY +  K    R +Q +EE
Sbjct: 252 EWVLCRIYKKQEKRNNVRNEQRNEE 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106187|ref|XP_002314077.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222850485|gb|EEE88032.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 90/133 (67%), Gaps = 3/133 (2%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP NRI DV LY+ +P +L   +K   E+E +FFT RD+K++NG+RPNR  G   G+WK
Sbjct: 109 PLPRNRIADVSLYQHNPEELAEQFKHYGEREWYFFTPRDKKYRNGTRPNRAAG--GGYWK 166

Query: 64  ATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLD 123
           AT  DK++  +  I+G++K+L +Y   +   +KTNW+MHEFR E   PP + +  DM+LD
Sbjct: 167 ATGADKKIVHDKAIVGYRKSLVYYNGKAPKGDKTNWMMHEFRMEAAAPPIRNNINDMRLD 226

Query: 124 -WVLCRIYHRGSK 135
            WVLCRIY +  K
Sbjct: 227 EWVLCRIYKKIQK 239

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746301|emb|CBI16357.3| unnamed protein product [Vitis vinifera]

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 94/146 (64%), Gaps = 5/146 (3%)

Query: 5   LPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKA 64
           LPPN+I++V LY + P +L   Y+     E F+FT R+RK++NG RPNR  G+  G+WKA
Sbjct: 65  LPPNKIIEVNLYGYDPDELAARYEPSGNDEWFYFTPRERKYRNGQRPNRSIGE--GYWKA 122

Query: 65  TSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGI-DMKL- 122
           T  DKE+KF    +G++K L FY+ ++ +  KTNWIMHEF     P P ++ G+ DM+L 
Sbjct: 123 TGADKEIKFEDRTVGYRKALVFYRGSAQNGVKTNWIMHEFTVAKPPGPPRRSGVNDMRLD 182

Query: 123 DWVLCRIYHRGSK-SKRADQASEEDQ 147
           D VLCR+Y    +  KR+  AS  D+
Sbjct: 183 DCVLCRVYRTDERIYKRSRHASRLDE 208

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435399|ref|XP_002282639.1| PREDICTED: uncharacterized protein LOC100250078 [Vitis vinifera]

 Score =  138 bits (347), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 102/165 (61%), Gaps = 6/165 (3%)

Query: 3   EPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFW 62
           +PLPPN+I++V LY + P +L   Y+     E F+FT RDRK+ NG RPNR    ++G W
Sbjct: 64  QPLPPNKIIEVNLYAYDPEELAARYEPCGNDEWFYFTPRDRKYPNGQRPNRSI--TNGHW 121

Query: 63  KATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGI-DMK 121
           KAT  DKE+KF    +G++K+L FY+       KTNW+MHEFR  + P P  + G+ DM+
Sbjct: 122 KATGADKEIKFEDCKVGYRKSLVFYRGGPRDGVKTNWMMHEFRVAEPPKPPSRSGVNDMR 181

Query: 122 L-DWVLCRIYHRGSK-SKRADQASEEDQYHGDDQSVDQPIQLNPN 164
           L D VLC+IY +  + SKR+   S  D+  G   S    ++LNPN
Sbjct: 182 LDDCVLCKIYKKEERISKRSRHESGLDE-SGSSSSKIPRLELNPN 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544902|ref|XP_002513512.1| conserved hypothetical protein [Ricinus communis] gi|223547420|gb|EEF48915.1| conserved hypothetical protein [Ricinus communis]

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 98/173 (56%), Gaps = 11/173 (6%)

Query: 5   LPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKA 64
           LPPN+I+ + LY F+P  L   Y    E E +FFT R +K++NG+RP R      G+WKA
Sbjct: 134 LPPNKIISLDLYNFNPEFLAEKYANYGENEWYFFTPRAKKYKNGNRPRRSA--DGGYWKA 191

Query: 65  TSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKH----GID- 119
           T  DKE+K    ++GF+K L FY     S  KTNWIMHE+R  D PPP +K     G D 
Sbjct: 192 TGADKEIKCRDIVVGFRKALVFYTGKPPSGVKTNWIMHEYRV-DKPPPLRKRKRDDGTDD 250

Query: 120 -MKL-DWVLCRIYHRGSKSKRADQASEEDQYHGDDQSVDQPIQLNPNINELVV 170
            M L DWVLCRIY +  K     + +EE     DD   D+ +  +   +++VV
Sbjct: 251 NMTLDDWVLCRIYKKSEKPNVRIRKAEEPDMQLDDNE-DEDMDGDVRADDIVV 302

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789356|emb|CAN73322.1| hypothetical protein VITISV_034302 [Vitis vinifera]

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 11/148 (7%)

Query: 5   LPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKA 64
           LPPN+I++V LY + P +L   Y+     E F+FT R+RK++NG RPNR  G+  G+WKA
Sbjct: 64  LPPNKIIEVNLYAYDPDELAARYEPSGNDEWFYFTPRERKYRNGQRPNRSIGE--GYWKA 121

Query: 65  TSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFR-AEDNPPPSKKHGIDMKL- 122
           T  +KE+KF    +G++K L FY+ +  +  KTNWIMHEF  A+   PP +    DM+L 
Sbjct: 122 TGAEKEIKFEDRTVGYRKALVFYRGSPQNGVKTNWIMHEFTVAKPTGPPRRSGANDMRLD 181

Query: 123 DWVLC-------RIYHRGSKSKRADQAS 143
           D VLC       RIY R   + R D++ 
Sbjct: 182 DCVLCRVCRTDERIYKRSXHASRLDESG 209

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478725|ref|XP_002282667.2| PREDICTED: NAC domain-containing protein 7-like [Vitis vinifera]

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 112/202 (55%), Gaps = 15/202 (7%)

Query: 19  SPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEII 78
           S  Q    Y+     E F+FT RDRK+ NG RPNR  G+  G+WKAT  DKE+KF    +
Sbjct: 58  SKRQSTTRYEPSGNDEWFYFTPRDRKYWNGQRPNRSIGE--GYWKATGDDKEIKFKDRTV 115

Query: 79  GFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGI-DMKL-DWVLCRIYHRGSK- 135
           G++K L FY+  S +  KTNWIMHEF     P P ++ G  DM+L D VLCR+Y    + 
Sbjct: 116 GYRKALVFYRGRSQNGVKTNWIMHEFTDAKPPGPPRRSGANDMRLDDCVLCRVYRTDERI 175

Query: 136 SKRADQASEEDQYHGDDQSVDQPIQLNPNINELVVISREYNNPSMEMEKPPSILPQEGQS 195
            KR+  AS  D+  G   S    + LNPN+NE+       NNP  E++ P  +  Q+ Q 
Sbjct: 176 YKRSWHASGLDE-SGPSSSKIPRLGLNPNLNEV-------NNPYEEIQMP--LQAQQPQP 225

Query: 196 FVEISQSGNPMQNNAIATNTQY 217
             EI Q+     + A+ +NTQ+
Sbjct: 226 RTEIFQAPQEPDHFALQSNTQF 247

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054978|ref|XP_002298396.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222845654|gb|EEE83201.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 92/164 (56%), Gaps = 23/164 (14%)

Query: 4   PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
           PLP NRI++  LY+F P  L   Y    EKE +FFT R+RK++NG+RPNR  G   G+WK
Sbjct: 75  PLPMNRIINADLYQFDPEDLAAQYSHHGEKEWYFFTPRNRKYKNGTRPNRAAG--GGYWK 132

Query: 64  ATSGDKEVKFNGEII-------------GFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNP 110
           AT  DK + +   +I             G +K L +Y       +KTNWIMHEFR +D+P
Sbjct: 133 ATGADKGITYEKRVIEAGKKITYQKTLVGHRKALVYYAGKPPKGDKTNWIMHEFRLDDSP 192

Query: 111 PPSKKHGIDMKL-DWVLCRIYHRGSKSK-------RADQASEED 146
              + +  DM+L D VLCRIY +  KS        R  Q++EE+
Sbjct: 193 LHVRNNRDDMRLDDCVLCRIYKKREKSTTNASTNVRNRQSNEEN 236

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116784797|gb|ABK23477.1| unknown [Picea sitchensis]

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 109/207 (52%), Gaps = 27/207 (13%)

Query: 2   NEPLPPNRIMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSS 59
           ++P P   I ++ LYKF P QL  + ++    EKE +FF+ RDRK+ NGSRPNR  G  S
Sbjct: 44  SQPFPIPIIAEIDLYKFDPWQLPEKALFG---EKEWYFFSPRDRKYPNGSRPNRAAG--S 98

Query: 60  GFWKATSGDKEVK--FNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHG 117
           G+WKAT  DK V    N   +G KK L FYK  +    KTNWIMHE+R  D+   + K  
Sbjct: 99  GYWKATGTDKPVTAGLNRMKVGVKKALVFYKGKAPRGIKTNWIMHEYRLADSASKAAKRK 158

Query: 118 IDMKL-DWVLCRIYHRGSKSKRADQAS----------EEDQYHGDDQSVDQP------IQ 160
             ++L DWVLCRIY +   S++A              EEDQY     S   P      + 
Sbjct: 159 GSIRLDDWVLCRIYEKHYASQKAVPKESNELSSCVDPEEDQYMAPVASNSPPDMDDNKLL 218

Query: 161 LN-PNINELVVISREYNNPSMEMEKPP 186
           +N P IN L  I+     PS E+ K P
Sbjct: 219 INLPRINSLNRINSLLKFPSREIMKMP 245

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.369	0.306	0.395	3.2e-26
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.349	0.381	0.465	8.4e-26
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.436	0.563	0.416	8.4e-26
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.580	0.640	0.380	1.8e-25
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.349	0.381	0.458	2.2e-25
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.658	0.626	0.32	3.6e-25
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.401	0.445	0.425	3.6e-25
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.381	0.521	0.446	4.6e-25
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.413	0.494	0.413	5.9e-25
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.424	0.468	0.383	7.6e-25

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
 Identities = 55/139 (39%), Positives = 77/139 (55%)

Query:     2 NEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGF 61
             + PL    I  + +YK+ P  L   +    EKE +F+  RDRK++N SRPNRVTG  +GF
Sbjct:    40 HNPLSIELIRQLDIYKYDPWDLP-KFAMTGEKEWYFYCPRDRKYRNSSRPNRVTG--AGF 96

Query:    62 WKATSGDKEVKFN--GEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAED--NPPPSKKHG 117
             WKAT  D+ +  +   + IG KK+L FYK  +    KT+W+MHEFR      P P  K  
Sbjct:    97 WKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRF 156

Query:   118 IDMKLD----WVLCRIYHR 132
              D  +     W +CRI+ +
Sbjct:   157 FDSPVSPNDSWAICRIFKK 175

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 61/131 (46%), Positives = 83/131 (63%)

Query:    10 IMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSG 67
             I ++ LYKF P  L  + ++    EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  
Sbjct:    46 IAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGT 100

Query:    68 DKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLC 127
             DK +   G+ +G KK L FY   +    KTNWIMHE+R  +   PS+++G     DWVLC
Sbjct:   101 DKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 157

Query:   128 RIYHRGSKSKR 138
             RIY + S +++
Sbjct:   158 RIYKKQSSAQK 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 65/156 (41%), Positives = 88/156 (56%)

Query:     1 MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSG 60
             M++P P + I +V +YKF P QL     +  E E +FF+ R+RK+ NG RPNR     SG
Sbjct:    32 MSKPCPVSIIPEVDIYKFDPWQLPEK-TEFGENEWYFFSPRERKYPNGVRPNRAA--VSG 88

Query:    61 FWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDM 120
             +WKAT  DK +      +G KK L FYK       KT+WIMHE+R  D+   S K    M
Sbjct:    89 YWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSM 148

Query:   121 KLD-WVLCRIYH-RGSKSKRADQASEEDQYHGDDQS 154
             +LD WVLCRIY  RG+     +Q    D+   +D++
Sbjct:   149 RLDEWVLCRIYKKRGASKLLNEQEGFMDEVLMEDET 184

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 84/221 (38%), Positives = 117/221 (52%)

Query:    32 EKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGFKKTLAFYKRTS 91
             EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  DK +  +G  +G KK L FY   +
Sbjct:    84 EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGTDKIITADGRRVGIKKALVFYAGKA 141

Query:    92 NSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRIYHRGSKSKRAD----QASEEDQ 147
                 KTNWIMHE+R  ++   S+ HG     DWVLCRIY + S S+R      QA  E+ 
Sbjct:   142 PKGTKTNWIMHEYRLIEH---SRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREE- 197

Query:   148 YHGDDQSVDQPIQLNPNINELVVIS-REYNNPSMEMEKPPSILPQEGQSFVEISQSG-NP 205
             +  +  S     QL+  ++    I  + +N P M   +  +IL   G +F   S +G NP
Sbjct:   198 HSTNGSSSSSSSQLDDVLDSFPEIKDQSFNLPRMNSLR--TIL--NG-NFDWASLAGLNP 252

Query:   206 MQNNAIATNTQYANPSHDNTLANDNVAANFTQHADPSQNNS 246
             +   A  TN   +   +D   A +  A +   H +  QN+S
Sbjct:   253 IPELA-PTNGLPSYGGYDAFRAAEGEAES--GHVNRQQNSS 290

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 60/131 (45%), Positives = 82/131 (62%)

Query:    10 IMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSG 67
             I ++ LYKF P  L  + ++    EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  
Sbjct:    46 IAEIDLYKFDPWVLPSKALFG---EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGT 100

Query:    68 DKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLC 127
             DK +   G  +G KK L FY   +    KTNWIMHE+R  +   PS+++G     DWVLC
Sbjct:   101 DKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 157

Query:   128 RIYHRGSKSKR 138
             RIY + + +++
Sbjct:   158 RIYKKQTSAQK 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 80/250 (32%), Positives = 115/250 (46%)

Query:     4 PLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWK 63
             PLP   I +V LYKF P +L        E+E +FF+ RDRK+ NG+RPNR    +SG+WK
Sbjct:    43 PLPVAIIAEVDLYKFDPWELPAK-ASFGEQEWYFFSPRDRKYPNGARPNRAA--TSGYWK 99

Query:    64 ATSGDKEVKFN--GEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGID-- 119
             AT  DK V  +   + +G KK L FY        K++WIMHE+R  +N P ++  G D  
Sbjct:   100 ATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFG 159

Query:   120 -----MKLD-WVLCRIYHRGSKSKRADQASEEDQYHGDDQSVDQPIQLNPNINELVVISR 173
                  ++LD WVLCRIY + + S+  D   + D      + +   + +      L    +
Sbjct:   160 NKKNSLRLDDWVLCRIYKKNNASRHVDNDKDHDMIDYIFRKIPPSLSMAAASTGL---HQ 216

Query:   174 EYNNPSMEMEKPPSILPQEGQSFVEISQSGNPM--QNNAIATNTQYANPSHDNTLANDNV 231
              ++N S  M   P      G  +   S  GN        +  N    +  HDN    D V
Sbjct:   217 HHHNVSRSMNFFPGKF--SGGGYGIFSDGGNTSIYDGGGMINNIGTDSVDHDNNA--DVV 272

Query:   232 AANFTQHADP 241
               N    + P
Sbjct:   273 GLNHASSSGP 282

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 63/148 (42%), Positives = 90/148 (60%)

Query:     2 NEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGF 61
             +EP+    I ++ LYKF+P +L  M     EKE +FF+ RDRK+ NGSRPNR  G  +G+
Sbjct:    74 SEPINVPVIAEIDLYKFNPWELPEM-ALYGEKEWYFFSHRDRKYPNGSRPNRAAG--TGY 130

Query:    62 WKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFR---AEDNPPPSKKHGI 118
             WKAT  DK +    + +G KK L FY   +    KTNWIMHE+R    + +   +KK+ +
Sbjct:   131 WKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNL 189

Query:   119 DMKLDWVLCRIYHR-GSKSKRADQASEE 145
              +  DWVLCRIY++ G+  K    A+E+
Sbjct:   190 RLD-DWVLCRIYNKKGTMEKYLPAAAEK 216

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 62/139 (44%), Positives = 85/139 (61%)

Query:     2 NEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGF 61
             ++P+P   I ++ LY++ P  L  M     EKE +FF+ RDRK+ NGSRPNR  G  +G+
Sbjct:    34 SQPIPAPIITELDLYRYDPWDLPDM-ALYGEKEWYFFSPRDRKYPNGSRPNRAAG--TGY 90

Query:    62 WKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAED-NPPPSKKHGIDM 120
             WKAT  DK +    + +G KK L FY     + EKTNWIMHE+R  D +    KK+ + +
Sbjct:    91 WKATGADKPIG-RPKPVGIKKALVFYSGKPPNGEKTNWIMHEYRLADVDRSVRKKNSLRL 149

Query:   121 KLDWVLCRIYHR-GSKSKR 138
               DWVLCRIY++ G   KR
Sbjct:   150 D-DWVLCRIYNKKGVIEKR 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 62/150 (41%), Positives = 88/150 (58%)

Query:    10 IMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDK 69
             I ++ LYK+ P +L  +     EKE +FF+ RDRK+ NGSRPNR  G  SG+WKAT  DK
Sbjct:    39 IAEIDLYKYDPWELPGL-ALYGEKEWYFFSPRDRKYPNGSRPNRSAG--SGYWKATGADK 95

Query:    70 EVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLD-WVLCR 128
              +    + +G KK L FY   +   EKTNWIMHE+R  D     +K    ++LD WVLCR
Sbjct:    96 PIGLP-KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCR 154

Query:   129 IYHRGSKSKRADQASEEDQYHGDDQSVDQP 158
             IY++   ++R  +       +GD+   ++P
Sbjct:   155 IYNKKGATER--RGPPPPVVYGDEIMEEKP 182

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 61/159 (38%), Positives = 89/159 (55%)

Query:    10 IMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDK 69
             ++DV L K  P  L        EKE +FF+QRDRK+  G R NR T   +G+WK T  DK
Sbjct:    37 VVDVDLNKCEPWDLPAK-ASMGEKEWYFFSQRDRKYPTGLRTNRAT--EAGYWKTTGKDK 93

Query:    70 EVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRI 129
             E+  +G ++G KKTL FYK  +   EK+NW+MHE+R E   P +  +    K +WV+CR+
Sbjct:    94 EIYRSGVLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLESKQPFNPTN----KEEWVVCRV 149

Query:   130 YHRGSKSKRADQASEEDQYHGDDQSVDQPIQLNPNI-NE 167
             + + + +K+A    +E Q      S   P   N ++ NE
Sbjct:   150 FEKSTAAKKA----QEQQPQSSQPSFGSPCDANSSMANE 184

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024591001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (325 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	346
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	5e-40

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  136 bits (346), Expect = 5e-40
 Identities = 53/109 (48%), Positives = 71/109 (65%), Gaps = 4/109 (3%)

Query: 1   MNEPLPPNRIM-DVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSS 59
           + +PLP   ++ +V +YKF P  L     K  ++E +FF+ RDRK+ NGSR NR TG  S
Sbjct: 24  LGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWYFFSPRDRKYPNGSRTNRATG--S 81

Query: 60  GFWKATSGDKEVK-FNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAE 107
           G+WKAT  DK V    GE++G KKTL FYK  +   EKT+W+MHE+R E
Sbjct: 82  GYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	346
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	99.96

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=99.96  E-value=8.7e-30  Score=216.76  Aligned_cols=104  Identities=46%  Similarity=0.848  Sum_probs=79.0

Q ss_pred             CCCCCCC-CceeecCCCCCCccchhhHhhhCCCceEEEEeecCccCCCCCCCceeccCCCceeeeecCCceeee-CCeee
Q 037150            1 MNEPLPP-NRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKF-NGEII   78 (346)
Q Consensus         1 mG~PLP~-~iI~evDVY~~ePWdLP~~~~~~gd~eWYFFspr~rKy~nG~R~~Ratg~ggGyWKatG~~k~I~~-~g~vI   78 (346)
                      +|.|+|. .+|+++|||++|||+|++. ...++++||||+++.+++.++.|++|++  ++|+||++|+.++|.. ++.+|
T Consensus        24 ~g~~~~~~~~i~~~Diy~~~P~~L~~~-~~~~~~~~yFF~~~~~~~~~~~r~~R~~--~~G~Wk~~g~~~~i~~~~g~~i  100 (129)
T PF02365_consen   24 LGEPLPCEDVIHDVDIYSAHPWELPAK-FKGGDEEWYFFSPRKKKYPNGGRPNRVT--GGGYWKSTGKEKPIKDPGGKVI  100 (129)
T ss_dssp             TT-HHCS-CHSEE--GGGS-GGGCHHH-SSS-SSEEEEEEE----------S-EEE--TTEEEEEECEEEEEEE-TTCEE
T ss_pred             cCCCCCcccceeecccCccChHHhhhh-ccCCCceEEEEEecccccCCcccccccc--cceEEeecccccccccccceee
Confidence            4677888 7999999999999999964 4456789999999999999999999999  9999999999999998 69999


Q ss_pred             EEEEEEeeeeccCCCCCccCeEEEEeeeC
Q 037150           79 GFKKTLAFYKRTSNSTEKTNWIMHEFRAE  107 (346)
Q Consensus        79 G~KKtLvFY~Gr~p~g~KT~WvMhEY~l~  107 (346)
                      |+|++|+||.++.+++.+|+|+||||+|.
T Consensus       101 G~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen  101 GFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            99999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	346
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-26
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-26
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		6e-22

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 83/131 (63%), Gaps = 10/131 (7%)
Query: 10  IMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSG 67
           I ++ LYKF P  L  + ++    EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  
Sbjct: 52  IAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGT 106
Query: 68  DKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLC 127
           DK +   G+ +G KK L FY   +    KTNWIMHE+R  +   PS+++G     DWVLC
Sbjct: 107 DKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 163
Query: 128 RIYHRGSKSKR 138
           RIY + S +++
Sbjct: 164 RIYKKQSSAQK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 83/131 (63%), Gaps = 10/131 (7%)
Query: 10  IMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSG 67
           I ++ LYKF P  L  + ++    EKE +FF+ RDRK+ NGSRPNRV G  SG+WKAT  
Sbjct: 49  IAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGT 103
Query: 68  DKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLC 127
           DK +   G+ +G KK L FY   +    KTNWIMHE+R  +   PS+++G     DWVLC
Sbjct: 104 DKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLC 160
Query: 128 RIYHRGSKSKR 138
           RIY + S +++
Sbjct: 161 RIYKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 5   LPPNRIMDVQLYKFSPAQL--EVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFW 62
           LP   I +V LYKF P  L    ++  R   E +FFT RDRK+ NGSRPNR  G+  G+W
Sbjct: 42  LPVPIIAEVDLYKFDPWDLPERALFGAR---EWYFFTPRDRKYPNGSRPNRAAGN--GYW 96
Query: 63  KATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFR-AEDNPPPSKKHGIDMK 121
           KAT  DK V   G  +G KK L FY   +    KT+WIMHE+R A+     +      ++
Sbjct: 97  KATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLR 156
Query: 122 L-DWVLCRIYHR 132
           L DWVLCR+Y++
Sbjct: 157 LDDWVLCRLYNK 168

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	346
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-49
1ut7_A	171	No apical meristem protein; transcription regulati	1e-48
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  162 bits (413), Expect = 2e-49
 Identities = 59/140 (42%), Positives = 77/140 (55%), Gaps = 5/140 (3%)

Query: 1   MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSG 60
             + LP   I +V LYKF P  L         +E +FFT RDRK+ NGSRPNR  G  +G
Sbjct: 38  AGQRLPVPIIAEVDLYKFDPWDLPERAL-FGAREWYFFTPRDRKYPNGSRPNRAAG--NG 94

Query: 61  FWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDN--PPPSKKHGI 118
           +WKAT  DK V   G  +G KK L FY   +    KT+WIMHE+R  D        K G 
Sbjct: 95  YWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGS 154

Query: 119 DMKLDWVLCRIYHRGSKSKR 138
               DWVLCR+Y++ ++ ++
Sbjct: 155 LRLDDWVLCRLYNKKNEWEK 174

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  160 bits (407), Expect = 1e-48
 Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 6/138 (4%)

Query: 1   MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSG 60
                    I ++ LYKF P  L        EKE +FF+ RDRK+ NGSRPNRV G  SG
Sbjct: 40  AGYDFSLQLIAEIDLYKFDPWVLPNKAL-FGEKEWYFFSPRDRKYPNGSRPNRVAG--SG 96

Query: 61  FWKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDM 120
           +WKAT  DK +   G+ +G KK L FY   +    KTNWIMHE+R  +    +    +D 
Sbjct: 97  YWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLD- 155

Query: 121 KLDWVLCRIYHRGSKSKR 138
             DWVLCRIY + S +++
Sbjct: 156 --DWVLCRIYKKQSSAQK 171

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 48/372 (12%), Positives = 105/372 (28%), Gaps = 115/372 (30%)

Query: 1   MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNG--------SRPN 52
           + E L  N       YKF  + ++   ++       +  QRDR + +         SR  
Sbjct: 83  VEEVLRIN-------YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135

Query: 53  RVTGDSSGFWKATSGDKEVKFNGEII-----GFKKT-LA-----FYKRTSNSTEKTNWIM 101
                     K      E++    ++     G  KT +A      YK       K  W+ 
Sbjct: 136 PY-------LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL- 187

Query: 102 HEFRAEDNPPPSKKHGIDMKLDWVLCRIYHRGSKSKRADQASEEDQYHGDDQSVDQPIQL 161
              +  ++P         +++   L           + D           D S +  +++
Sbjct: 188 -NLKNCNSP------ETVLEMLQKLLY---------QIDPNWTS----RSDHSSNIKLRI 227

Query: 162 NPNINEL--VVISREYNNPSMEMEKPPSIL-------PQEGQSF------------VEIS 200
           +    EL  ++ S+ Y N          +L        +   +F             +++
Sbjct: 228 HSIQAELRRLLKSKPYEN---------CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 201 QSGNPMQNNAIATNTQYANPSHDNTLANDNVAANFTQHAD---PSQNNSLDPNAFVSAM- 256
              +      I+ +      + D   +   +   +        P +  + +P     ++ 
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKS---LLLKYLDCRPQDLPREVLTTNP--RRLSII 333

Query: 257 -QFSSDIP-----YNYANASSLDNMHHQLPLQSGFLEIAQPSNSMIAMDAELQAFAV--- 307
            +   D       + + N   L  +          L + +P+             +V   
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTI------IESSLNVLEPAE----YRKMFDRLSVFPP 383

Query: 308 ---ITESLLSPL 316
              I   LLS +
Sbjct: 384 SAHIPTILLSLI 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	346
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=8.5e-42  Score=306.14  Aligned_cols=132  Identities=42%  Similarity=0.748  Sum_probs=109.3

Q ss_pred             CCCCCCCCceeecCCCCCCccchhhHhhhCCCceEEEEeecCccCCCCCCCceeccCCCceeeeecCCceeeeCCeeeEE
Q 037150            1 MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGF   80 (346)
Q Consensus         1 mG~PLP~~iI~evDVY~~ePWdLP~~~~~~gd~eWYFFspr~rKy~nG~R~~Ratg~ggGyWKatG~~k~I~~~g~vIG~   80 (346)
                      +|.|+|.++|+++|||++|||+||+. +..++++|||||++++||++|.|++|+|  ++||||+||++++|...|.+||+
T Consensus        38 ~g~~~~~~~I~evDvy~~~Pw~Lp~~-~~~g~~ewYFFs~r~~ky~~g~R~nR~t--~~G~WkatG~dk~I~~~g~~vG~  114 (174)
T 3ulx_A           38 AGQRLPVPIIAEVDLYKFDPWDLPER-ALFGAREWYFFTPRDRKYPNGSRPNRAA--GNGYWKATGADKPVAPRGRTLGI  114 (174)
T ss_dssp             HTCCCSSSCCEECCGGGSCGGGSGGG-CSSCSSEEEEEEECCC-----CCSCEEE--TTEEEEECSCCEEECCSSSCCEE
T ss_pred             cCCCCCcCeeeecccccCCchhhhhh-hccCCceEEEEeccccccCCCCCceeec--CCceEccCCCCcEEeeCCcEEEE
Confidence            37899999999999999999999998 6678899999999999999999999999  99999999999999988999999


Q ss_pred             EEEEeeeeccCCCCCccCeEEEEeeeCCCCCCCC-CCCCCC-CcceEEEEEEEcCCC
Q 037150           81 KKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSK-KHGIDM-KLDWVLCRIYHRGSK  135 (346)
Q Consensus        81 KKtLvFY~Gr~p~g~KT~WvMhEY~l~~~~~~~~-~~~~~~-~~d~VLCRIykK~~~  135 (346)
                      ||+||||.|+++++.||+|+||||+|........ ...+.+ .++|||||||+|+..
T Consensus       115 KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~~  171 (174)
T 3ulx_A          115 KKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE  171 (174)
T ss_dssp             EEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESCC-
T ss_pred             EEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcCCC
Confidence            9999999999999999999999999998764321 011223 359999999998753

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.1e-41  Score=304.60  Aligned_cols=130  Identities=45%  Similarity=0.751  Sum_probs=107.1

Q ss_pred             CCCCCCCCceeecCCCCCCccchhhHhhhCCCceEEEEeecCccCCCCCCCceeccCCCceeeeecCCceeeeCCeeeEE
Q 037150            1 MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGF   80 (346)
Q Consensus         1 mG~PLP~~iI~evDVY~~ePWdLP~~~~~~gd~eWYFFspr~rKy~nG~R~~Ratg~ggGyWKatG~~k~I~~~g~vIG~   80 (346)
                      +|.|+|.++|+++|||++|||+||+. +..++++|||||++++||++|.|++|+|  ++||||+||+++.|..++.+||+
T Consensus        40 ~g~~~~~~~I~e~Diy~~~Pw~Lp~~-~~~g~~ewyFFs~r~~k~~~g~R~~R~t--~~G~Wk~tG~~k~I~~~~~~vG~  116 (171)
T 1ut7_A           40 AGYDFSLQLIAEIDLYKFDPWVLPNK-ALFGEKEWYFFSPRDRKYPNGSRPNRVA--GSGYWKATGTDKIISTEGQRVGI  116 (171)
T ss_dssp             TTCCCSSCCSEECCGGGSCGGGHHHH-SSSCSSEEEEEEECCC-------CCEEE--TTEEEEEEEEEEEEEETTEEEEE
T ss_pred             cCCCCCCCeEeecccccCChhHhhch-hhcCCccEEEEeccccccCCCCcccccC--CCCEEeccCCCceEEecCcEEEE
Confidence            47899999999999999999999999 6778899999999999999999999999  99999999999999999999999


Q ss_pred             EEEEeeeeccCCCCCccCeEEEEeeeCCCCCCCCCCCCCCCcceEEEEEEEcCCCC
Q 037150           81 KKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRIYHRGSKS  136 (346)
Q Consensus        81 KKtLvFY~Gr~p~g~KT~WvMhEY~l~~~~~~~~~~~~~~~~d~VLCRIykK~~~~  136 (346)
                      ||+|+||.|+++++.||+|+||||+|.......   ......+|||||||+|+...
T Consensus       117 KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~---~~~~~~~~VlCrv~~k~~~~  169 (171)
T 1ut7_A          117 KKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN---GSTKLDDWVLCRIYKKQSSA  169 (171)
T ss_dssp             EEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------CCEEEEEEEECC---
T ss_pred             EEEEEEEcCcCCCCCcCCeEEEEEEcCCCcccc---CcccCCCEEEEEEEEcCCCC
Confidence            999999999999999999999999999875321   11234599999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	346
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-37

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  130 bits (327), Expect = 2e-37
 Identities = 59/131 (45%), Positives = 75/131 (57%), Gaps = 6/131 (4%)

Query: 2   NEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGF 61
                   I ++ LYKF P  L         KE +FF+ RDRK+ NGSRPNRV G  SG+
Sbjct: 41  GYDFSLQLIAEIDLYKFDPWVLPNKALFGE-KEWYFFSPRDRKYPNGSRPNRVAG--SGY 97

Query: 62  WKATSGDKEVKFNGEIIGFKKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMK 121
           WKAT  DK +   G+ +G KK L FY   +    KTNWIMHE+R  +   PS+++G    
Sbjct: 98  WKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKL 154

Query: 122 LDWVLCRIYHR 132
            DWVLCRIY +
Sbjct: 155 DDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	346
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-38  Score=280.07  Aligned_cols=127  Identities=45%  Similarity=0.760  Sum_probs=105.5

Q ss_pred             CCCCCCCCceeecCCCCCCccchhhHhhhCCCceEEEEeecCccCCCCCCCceeccCCCceeeeecCCceeeeCCeeeEE
Q 037150            1 MNEPLPPNRIMDVQLYKFSPAQLEVMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGDSSGFWKATSGDKEVKFNGEIIGF   80 (346)
Q Consensus         1 mG~PLP~~iI~evDVY~~ePWdLP~~~~~~gd~eWYFFspr~rKy~nG~R~~Ratg~ggGyWKatG~~k~I~~~g~vIG~   80 (346)
                      +|.|||.++|+++|||++|||+||+. ...++++||||+++++++++|.|++|++  ++|+||++|+++.|..+|.+||+
T Consensus        40 ~g~~l~~~~I~~~Dvy~~~Pw~Lp~~-~~~~~~~wyFft~~~~k~~~g~r~~R~~--g~G~Wk~~g~~~~i~~~g~~vG~  116 (166)
T d1ut7a_          40 AGYDFSLQLIAEIDLYKFDPWVLPNK-ALFGEKEWYFFSPRDRKYPNGSRPNRVA--GSGYWKATGTDKIISTEGQRVGI  116 (166)
T ss_dssp             TTCCCSSCCSEECCGGGSCGGGHHHH-SSSCSSEEEEEEECCC-------CCEEE--TTEEEEEEEEEEEEEETTEEEEE
T ss_pred             cCCCCCcccceeccCCcCChhhccch-hccCcceEEEEeeeccccCCCCcccccc--CCCEecccCCCceEecCCcEEEE
Confidence            47899999999999999999999998 6667889999999999999999999999  89999999999999999999999


Q ss_pred             EEEEeeeeccCCCCCccCeEEEEeeeCCCCCCCCCCCCCCCcceEEEEEEEcC
Q 037150           81 KKTLAFYKRTSNSTEKTNWIMHEFRAEDNPPPSKKHGIDMKLDWVLCRIYHRG  133 (346)
Q Consensus        81 KKtLvFY~Gr~p~g~KT~WvMhEY~l~~~~~~~~~~~~~~~~d~VLCRIykK~  133 (346)
                      ||+|+||.++.+++.+|+|+||||+|.......   ......+|||||||+|+
T Consensus       117 kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~---~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         117 KKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN---GSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------CCEEEEEEEECC
T ss_pred             EEEEEEEecCCCCCCccCeEEEEEecCCccccc---CccccCCEEEEEEEecC
Confidence            999999999999999999999999998876432   12234599999999985