Citrus Sinensis ID: 037161

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccEEEEEcccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHccHHHHHHHHHHHHHHccccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHcccccEEEEEEEccEEEEEEEc
Coil and Loop (DISEMBL)
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVlpelpensatskanSQIDVFMlthsprgkvrtkhEFINLataagfsgirFQCFVCNSWVMEFYK
Flexible Loop (DISEMBL)
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPensatskansqiDVFMLTHSPRGKVRTKHEFINLAtaagfsgirFQCFVCNSWVMEFYK
Low Complexity Region (SEG)
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK
Disordered region (IsUnstruct)
**LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP**************IDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY*
Disordered Region (DISOPRED)
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK
Disordered Region (DISEMBL)
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK
Disordered Region (DISPRO)
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
Q9FQY8	359	Caffeic acid 3-O-methyltr	N/A	no	0.979	0.270	0.530	2e-25
P28002	365	Caffeic acid 3-O-methyltr	N/A	no	0.979	0.265	0.520	1e-24
A9X7L0	364	Anthranilate N-methyltran	N/A	no	0.979	0.266	0.5	3e-24
Q43239	354	Caffeic acid 3-O-methyltr	N/A	no	0.979	0.274	0.520	4e-23
Q8GU25	365	Caffeic acid 3-O-methyltr	N/A	no	0.979	0.265	0.510	5e-23
P59049	343	Quercetin 3-O-methyltrans	N/A	no	0.979	0.282	0.5	1e-22
Q42653	343	Quercetin 3-O-methyltrans	N/A	no	0.979	0.282	0.5	1e-22
O23760	370	Caffeic acid 3-O-methyltr	N/A	no	0.979	0.262	0.520	2e-22
Q9XGW0	361	Caffeic acid 3-O-methyltr	N/A	no	0.979	0.268	0.5	2e-22
Q43047	364	Caffeic acid 3-O-methyltr	N/A	no	0.979	0.266	0.5	2e-22

>sp|Q9FQY8|COMT1_CAPAN Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLK LKNCYE++   +GK++V E +LPE P+ SA +K    +D+ ML H+P
Sbjct: 263 ICHDWSDEHCLKFLKNCYEAL-PANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNP 321

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA  AGF+G R  C    +WVMEF+K
Sbjct: 322 GGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359

Catalyzes the conversion of caffeic acid to ferulic acid and of 5-hydroxyferulic acid to sinapic acid. The resulting products may subsequently be converted to the corresponding alcohols that are incorporated into lignins.
Capsicum annuum (taxid: 4072)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 6EC: 8

>sp|P28002|COMT1_MEDSA Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLK LKNCYE++  ++GK+IV E +LP  P++S  +K    IDV ML H+P
Sbjct: 267 ICHDWSDEHCLKFLKNCYEAL-PDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNP 325

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF +LA  AGF G +  C   N+++MEF K
Sbjct: 326 GGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363

Catalyzes the conversion of caffeic acid to ferulic acid and of 5-hydroxyferulic acid to sinapic acid. The resulting products may subsequently be converted to the corresponding alcohols that are incorporated into lignins.

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|A9X7L0|ANMT_RUTGR Anthranilate N-methyltransferase OS=Ruta graveolens PE=1 SV=1

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 69/98 (70%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH W DE CL++LKNCY++   E+GK+IV+ +V+PE PE S++++  S +DV ++T   
Sbjct: 268 ILHCWDDEQCLRILKNCYKA-TPENGKVIVMNSVVPETPEVSSSARETSLLDVLLMTRDG 326

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            G+ RT+ EF  LA  AGF GI F C VCN  +MEF+K
Sbjct: 327 GGRERTQKEFTELAIGAGFKGINFACCVCNLHIMEFFK 364

Involved in the biosynthesis of acridine alkaloids. N-methyltransferase with a strict substrate specificity for anthranilate. No activity with anthranilic acid methyl ester, anthraniloyl CoA, 3- or 4-amino-benzoic acid, salicylic acid, catechol, eugenol, caffeic acid, quercetin, theobromin, theophyllin, putrescine and nicotinic acid among others.

Ruta graveolens (taxid: 37565)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 1

>sp|Q43239|COMT1_ZINEL Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSD HCL++LKNCY+S+  E+GK+IV E +LPE P+ +  ++    IDV ML H+P
Sbjct: 258 ILHDWSDAHCLQVLKNCYKSL-PENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNP 316

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA  AGF G        N+WVMEF K
Sbjct: 317 GGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354

Catalyzes the conversion of caffeic acid to ferulic acid and of 5-hydroxyferulic acid to sinapic acid. The resulting products may subsequently be converted to the corresponding alcohols that are incorporated into lignins.

Zinnia elegans (taxid: 34245)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|Q8GU25|COMT1_ROSCH Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLK LKNCY ++  ++GK+I+ E +LP  P+ S  +K    IDV ML H+P
Sbjct: 267 ICHDWSDEHCLKFLKNCYAAL-PDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNP 325

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA  +GF GIR  C   N++V+EF K
Sbjct: 326 GGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363

Catalyzes the conversion of caffeic acid to ferulic acid and of 5-hydroxyferulic acid to sinapic acid. The resulting products may subsequently be converted to the corresponding alcohols that are incorporated into lignins.

Rosa chinensis (taxid: 74649)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|P59049|OMT1_CHRAE Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLKLLKNCY+++   +GK+I+ E +LPE+P++S  +K    IDV  + H+P
Sbjct: 243 ICHDWSDEHCLKLLKNCYDAL-PNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNP 301

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA AAGF G +  C   N++++EF K
Sbjct: 302 GGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339

Methylates OH residues of flavonoid and phenylpropanoid compounds and shows a higher affinity for flavonoid than phenylpropanoid substrates. Substrate preference is quercetin (flavonoid) = luteolin (flavonoid) > 5-hydroxyferulic acid (phenylpropanoid) > caffeic acid (phenylpropanoid) >> apigenin (flavonoid) = kempferol (flavonoid). 3,4-dimethylquercetin is not a substrate.

Chrysosplenium americanum (taxid: 36749)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 6

>sp|Q42653|OMT2_CHRAE Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLKLLKNCY+++   +GK+I+ E +LPE+P++S  +K    IDV  + H+P
Sbjct: 243 ICHDWSDEHCLKLLKNCYDAL-PNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNP 301

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA AAGF G +  C   N++++EF K
Sbjct: 302 GGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339

Methylates OH residues of flavonoid and phenylpropanoid compounds and shows a higher affinity for flavonoid than phenylpropanoid substrates. Substrate preference is quercetin (flavonoid) = luteolin (flavonoid) = 5-hydroxyferulic acid (phenylpropanoid) > caffeic acid (phenylpropanoid) >> apigenin (flavonoid) = kempferol (flavonoid). 3,4-dimethylquercetin is not a substrate.

Chrysosplenium americanum (taxid: 36749)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 6

>sp|O23760|COMT1_CLABR Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLK LKNCY ++  E GK+IV E +LP  P+ S  +K    ID  ML H+P
Sbjct: 272 ICHDWSDEHCLKFLKNCYAAL-PEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNP 330

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA  AGF G +  C   N++VMEF K
Sbjct: 331 GGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368

Catalyzes the conversion of caffeic acid to ferulic acid and of 5-hydroxyferulic acid to sinapic acid. The resulting products may subsequently be converted to the corresponding alcohols that are incorporated into lignins.

Clarkia breweri (taxid: 36903)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|Q9XGW0|COMT1_OCIBA Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHC+K LKNCY+++  ++GK+I+ E VLPE P+    +K    IDV ML H+P
Sbjct: 265 ICHDWSDEHCVKFLKNCYDAL-PQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNP 323

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA AAGF      C   N+W+ME  K
Sbjct: 324 GGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361

Catalyzes the conversion of caffeic acid to ferulic acid and of 5-hydroxyferulic acid to sinapic acid. The resulting products may subsequently be converted to the corresponding alcohols that are incorporated into lignins.

Ocimum basilicum (taxid: 39350)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|Q43047|COMT3_POPKI Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCL+LLKNCY+++  E+GK+I+VE +LP  P+ S  +K    +D  ML H+P
Sbjct: 266 ICHDWSDEHCLRLLKNCYDAL-PENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNP 324

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT  EF  LA  AGF G    C   N+ V+EF K
Sbjct: 325 GGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362

Catalyzes the conversion of caffeic acid to ferulic acid and of 5-hydroxyferulic acid to sinapic acid. The resulting products may subsequently be converted to the corresponding alcohols that are incorporated into lignins.

Populus kitakamiensis (taxid: 34292)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
284437809	377	O-methyltransferase-like protein [Prunus	0.979	0.257	0.653	3e-33
225453646	357	PREDICTED: caffeic acid 3-O-methyltransf	0.979	0.271	0.642	1e-30
145695037	353	O-methyltransferase [Citrus sinensis x C	0.989	0.277	0.626	3e-30
356573271	372	PREDICTED: caffeic acid 3-O-methyltransf	0.979	0.260	0.646	7e-30
147804685	395	hypothetical protein VITISV_001577 [Viti	0.979	0.245	0.612	2e-29
225453644	367	PREDICTED: caffeic acid 3-O-methyltransf	0.979	0.264	0.612	2e-29
268528131	356	caffeic acid O-methyltransferase 3 [Goss	0.979	0.272	0.612	2e-29
296089020	184	unnamed protein product [Vitis vinifera]	0.979	0.527	0.612	4e-29
388494808	362	unknown [Medicago truncatula]	0.979	0.267	0.622	6e-29
357512657	362	Caffeic acid 3-O-methyltransferase [Medi	0.979	0.267	0.622	6e-29

>gi|284437809|gb|ADB85561.1| O-methyltransferase-like protein [Prunus mume]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 81/98 (82%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSDEHCLKLLKNCY++I  ++GK+IVVEA+LP +PE S  +K  SQ+DV M+T +P
Sbjct: 281 ILHDWSDEHCLKLLKNCYKAI-PDNGKVIVVEALLPAMPETSTATKTTSQLDVVMMTQNP 339

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK R++ EF+ LAT AGFSGIR++CFVCN WVMEF+K
Sbjct: 340 GGKERSEQEFMALATGAGFSGIRYECFVCNFWVMEFFK 377

Source: Prunus mume

Species: Prunus mume

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453646|ref|XP_002267543.1| PREDICTED: caffeic acid 3-O-methyltransferase 1 [Vitis vinifera]

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/98 (64%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSDEHCLKLLKNCY ++  E GK+IVVE VLP  PE SA  KA SQ D+ M+  +P
Sbjct: 261 ILHDWSDEHCLKLLKNCYNAL-PEHGKVIVVEGVLPAAPETSAVVKAVSQTDLIMMAQNP 319

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF++LAT AGF+GIRF+CFV   WVMEF+K
Sbjct: 320 GGKERTREEFLDLATGAGFAGIRFECFVLTYWVMEFFK 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145695037|gb|ABP94018.1| O-methyltransferase [Citrus sinensis x Citrus reticulata]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 77/99 (77%), Gaps = 1/99 (1%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
           S+LH W+DEHCLKLLKNCY+SI  EDGK+IVVE++LPE+P  S  SK+NS +DV M+  S
Sbjct: 256 SVLHDWNDEHCLKLLKNCYKSI-PEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQS 314

Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
           P GK RT+HEF+ LAT AGF GI  +  + + WVMEFYK
Sbjct: 315 PGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 353

Source: Citrus sinensis x Citrus reticulata

Species: Citrus sinensis x Citrus reticulata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573271|ref|XP_003554786.1| PREDICTED: caffeic acid 3-O-methyltransferase-like [Glycine max]

 Score =  134 bits (337), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 80/99 (80%), Gaps = 2/99 (2%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENS-ATSKANSQIDVFMLTHS 60
           ILH WSDE+CLKLLKNCY++I  +DGK+IVVEAVLP +PE S A  KA SQ DV M+T +
Sbjct: 275 ILHDWSDEYCLKLLKNCYDAI-PDDGKVIVVEAVLPIIPETSNAAWKAVSQTDVLMMTQN 333

Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
           P GK R+  EF++LATAAGFSGIR++C+V   W+MEF+K
Sbjct: 334 PGGKERSDQEFMDLATAAGFSGIRYECYVRTFWIMEFFK 372

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147804685|emb|CAN69189.1| hypothetical protein VITISV_001577 [Vitis vinifera]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSDEHCLKLLKNCY+++  E GK IVVE  LPE+PE SA+ +A  + D+ M+T +P
Sbjct: 299 ILHDWSDEHCLKLLKNCYKAL-PEHGKAIVVEGFLPEIPEGSASVQALCEGDLIMMTQNP 357

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            G+ RTK EF++LA AAGF+GIRF+C V N W+MEF+K
Sbjct: 358 GGRERTKQEFLDLAMAAGFAGIRFECLVYNYWIMEFFK 395

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453644|ref|XP_002267952.1| PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Vitis vinifera]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSDEHCLKLLKNCY+++  E GK IVVE  LPE+PE SA+ +A  + D+ M+T +P
Sbjct: 271 ILHDWSDEHCLKLLKNCYKAL-PEHGKAIVVEGFLPEIPEGSASVQALCEGDLIMMTQNP 329

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            G+ RTK EF++LA AAGF+GIRF+C V N W+MEF+K
Sbjct: 330 GGRERTKQEFLDLAMAAGFAGIRFECLVYNYWIMEFFK 367

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|268528131|gb|ACZ06242.1| caffeic acid O-methyltransferase 3 [Gossypium hirsutum]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WS +HCLKLLKNCY +I K DGK+IVVEAV+P++PE +A  ++ +Q+D+ ML   P
Sbjct: 260 ILHDWSGDHCLKLLKNCYNAIPK-DGKVIVVEAVVPDVPEANAYLRSITQVDMVMLAQDP 318

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RTK EF  LAT AGFSGIR++CF C+ W+MEF+K
Sbjct: 319 GGKERTKSEFEALATKAGFSGIRYECFACSYWIMEFFK 356

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089020|emb|CBI38723.3| unnamed protein product [Vitis vinifera]

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSDEHCLKLLKNCY+++  E GK IVVE  LPE+PE SA+ +A  + D+ M+T +P
Sbjct: 88  ILHDWSDEHCLKLLKNCYKAL-PEHGKAIVVEGFLPEIPEGSASVQALCEGDLIMMTQNP 146

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            G+ RTK EF++LA AAGF+GIRF+C V N W+MEF+K
Sbjct: 147 GGRERTKQEFLDLAMAAGFAGIRFECLVYNYWIMEFFK 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494808|gb|AFK35470.1| unknown [Medicago truncatula]

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 61/98 (62%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSDE CLKLLKNCY++I  +DGK+IV+EAVL  +PEN+A  K  +Q DV M+T SP
Sbjct: 266 ILHDWSDEQCLKLLKNCYDAI-PDDGKVIVLEAVLSIIPENNAAWKFAAQSDVLMMTQSP 324

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF++LA  AGFSGIR++C+V   WVMEF+K
Sbjct: 325 GGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512657|ref|XP_003626617.1| Caffeic acid 3-O-methyltransferase [Medicago truncatula] gi|87240860|gb|ABD32718.1| O-methyltransferase, family 2; Dimerisation [Medicago truncatula] gi|355501632|gb|AES82835.1| Caffeic acid 3-O-methyltransferase [Medicago truncatula]

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 61/98 (62%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSDE CLKLLKNCY++I  +DGK+IV+EAVL  +PEN+A  K  +Q DV M+T SP
Sbjct: 266 ILHDWSDEQCLKLLKNCYDAI-PDDGKVIVLEAVLSIIPENNAAWKFAAQSDVLMMTQSP 324

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF++LA  AGFSGIR++C+V   WVMEF+K
Sbjct: 325 GGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
UNIPROTKB|Q6ZD89	368	ROMT-9 "Flavone 3'-O-methyltra	0.979	0.263	0.489	9e-22
TAIR|locus:2153423	363	OMT1 "AT5G54160" [Arabidopsis	0.858	0.234	0.546	1.1e-21
TAIR|locus:2038026	352	AT1G33030 [Arabidopsis thalian	0.969	0.272	0.444	1.5e-18
UNIPROTKB|Q84N28	360	OMT1 "Flavone O-methyltransfer	0.959	0.263	0.46	8.7e-18
TAIR|locus:2199607	373	IGMT1 "indole glucosinolate O-	0.969	0.257	0.43	1.1e-16
TAIR|locus:2199597	373	IGMT3 "indole glucosinolate O-	0.969	0.257	0.43	1.4e-16
TAIR|locus:2199582	373	IGMT4 "indole glucosinolate O-	0.969	0.257	0.43	1.4e-16
TAIR|locus:2199587	373	IGMT2 "indole glucosinolate O-	0.969	0.257	0.42	1.1e-15
TAIR|locus:2164087	378	AT5G53810 [Arabidopsis thalian	0.979	0.256	0.454	5.4e-15
TAIR|locus:2204680	381	AT1G77520 [Arabidopsis thalian	0.979	0.254	0.424	7.2e-15

UNIPROTKB|Q6ZD89 ROMT-9 "Flavone 3'-O-methyltransferase 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 48/98 (48%), Positives = 65/98 (66%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
             ILH WSDEHC +LLKNCY+++  E GK++VVE VLPE  + +A  +    +D+ ML H+P
Sbjct:   272 ILHDWSDEHCARLLKNCYDAL-PEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNP 330

Query:    62 RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
              GK R + EF  LA AAGF+G +      N+W +EF K
Sbjct:   331 GGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368

GO:0030744 "luteolin O-methyltransferase activity" evidence=IDA

GO:0032259 "methylation" evidence=IDA

TAIR|locus:2153423 OMT1 "AT5G54160" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 47/86 (54%), Positives = 61/86 (70%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
             I H WSDEHC+K LKNCYES+  EDGK+I+ E +LPE P++S ++K    +D  ML H+P
Sbjct:   265 ICHDWSDEHCVKFLKNCYESL-PEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNP 323

Query:    62 RGKVRTKHEFINLATAAGFSGIRFQC 87
              GK RT+ EF  LA A+GF GI+  C
Sbjct:   324 GGKERTEKEFEALAKASGFKGIKVVC 349

GO:0030744 "luteolin O-methyltransferase activity" evidence=IDA

GO:0030755 "quercetin 3-O-methyltransferase activity" evidence=IDA

GO:0033799 "myricetin 3'-O-methyltransferase activity" evidence=IDA

GO:0047763 "caffeate O-methyltransferase activity" evidence=ISS;IMP

GO:0051555 "flavonol biosynthetic process" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0005829 "cytosol" evidence=TAS

TAIR|locus:2038026 AT1G33030 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 44/99 (44%), Positives = 68/99 (68%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
             +LH+W D+HC+K+L NCY+S+   +GK+IVV+ V+PE P ++   ++  Q ++FM+  +P
Sbjct:   254 MLHSWDDDHCVKILSNCYQSL-PSNGKVIVVDMVIPEFPGDTLLDRSLFQFELFMMNMNP 312

Query:    62 RGKVRTKHEFINLATAAGFSGIRFQ-CFVCNSWVMEFYK 99
              GK RTK EF  LA  AGFS ++     +C S V+EF+K
Sbjct:   313 SGKERTKKEFEILARLAGFSNVQVPFTSLCFS-VLEFHK 350

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008171 "O-methyltransferase activity" evidence=IEA;ISS

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0009809 "lignin biosynthetic process" evidence=ISS

UNIPROTKB|Q84N28 OMT1 "Flavone O-methyltransferase 1" [Triticum aestivum (taxid:4565)]

 Score = 219 (82.2 bits), Expect = 8.7e-18, P = 8.7e-18
 Identities = 46/100 (46%), Positives = 62/100 (62%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS--QIDVFMLTH 59
             ILH WSDEHC  LLKNCY+++    GK+++VE +LP  PE  AT KA     +D+ ML H
Sbjct:   264 ILHDWSDEHCATLLKNCYDALPAH-GKVVLVECILPVNPE--ATPKAQGVFHVDMIMLAH 320

Query:    60 SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
             +P G+ R + EF  LA  AGF  I+      N++ +EF K
Sbjct:   321 NPGGRERYEREFEALAKGAGFKAIKTTYIYANAFAIEFTK 360

GO:0009611 "response to wounding" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IDA

GO:0042542 "response to hydrogen peroxide" evidence=IDA

TAIR|locus:2199607 IGMT1 "indole glucosinolate O-methyltransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 43/100 (43%), Positives = 65/100 (65%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS--QIDVFMLTH 59
             ILH W+DE C+K+LKNC++S+  E+GK++V+E V P+  EN   + AN    +D+ M T 
Sbjct:   276 ILHDWTDEDCVKILKNCWKSL-PENGKVVVIELVTPDEAENGDIN-ANIAFDMDMLMFTQ 333

Query:    60 SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
                GK R++ EF  LA A+GF+  +F C   + W++EF K
Sbjct:   334 CSGGKERSRAEFEALAAASGFTHCKFVCQAYHCWIIEFCK 373

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA;IDA

GO:0008171 "O-methyltransferase activity" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0042343 "indole glucosinolate metabolic process" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

TAIR|locus:2199597 IGMT3 "indole glucosinolate O-methyltransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 43/100 (43%), Positives = 65/100 (65%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS--QIDVFMLTH 59
             ILH W+DE C+K+LKNC++S+  ++GK++V+E V P+  EN   + AN    +D+ M T 
Sbjct:   276 ILHDWTDEDCVKILKNCWKSL-PQNGKVVVIELVTPDEAENGDIN-ANIAFDMDMLMFTQ 333

Query:    60 SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
                GK R++ EF  LA A+GFS  +F C   + W++EF K
Sbjct:   334 CSGGKERSRAEFEALAAASGFSHCQFVCQAYHCWIIEFCK 373

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008171 "O-methyltransferase activity" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

TAIR|locus:2199582 IGMT4 "indole glucosinolate O-methyltransferase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 43/100 (43%), Positives = 64/100 (64%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS--QIDVFMLTH 59
             ILH W+DE C+K+LKNC++S+  E GK++V+E V P+  EN   + AN    +D+ M T 
Sbjct:   276 ILHDWTDEDCVKILKNCWKSL-PESGKVVVIELVTPDEAENGDIN-ANIAFDMDMLMFTQ 333

Query:    60 SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
                GK R++ EF  LA A+GF+  +F C   + W++EF K
Sbjct:   334 CSGGKERSRAEFEALAAASGFTHCKFVCQAYHCWIIEFCK 373

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008171 "O-methyltransferase activity" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

TAIR|locus:2199587 IGMT2 "indole glucosinolate O-methyltransferase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 42/100 (42%), Positives = 64/100 (64%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS--QIDVFMLTH 59
             ILH W+DE C+K+LKNC++S+  E+GK++V+E V P+  EN   + AN    +D+ M T 
Sbjct:   276 ILHDWTDEDCVKILKNCWKSL-PENGKVVVIELVTPDEAENGDIN-ANIAFDMDMLMFTQ 333

Query:    60 SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
                GK R++ EF  LA A+ F+  +F C   + W++EF K
Sbjct:   334 CSGGKERSRAEFEALAAASCFTHCKFVCQAYHCWIIEFCK 373

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA;IDA

GO:0008171 "O-methyltransferase activity" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0042343 "indole glucosinolate metabolic process" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

TAIR|locus:2164087 AT5G53810 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 45/99 (45%), Positives = 59/99 (59%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP-ELPENSATSKANSQIDVFMLTHS 60
             ILH W+DE C+ +LKNC++S+ +E+GKLI+VE V P E       S     +D+ MLT  
Sbjct:   281 ILHDWTDEQCVAILKNCWKSL-EENGKLIIVEMVTPVEAKSGDICSNIVFGMDMTMLTQC 339

Query:    61 PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
               GK R  +EF NLA A+GFS     C V    V+E YK
Sbjct:   340 SGGKERDLYEFENLAYASGFSRCAIVCAVYPFSVIEIYK 378

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008171 "O-methyltransferase activity" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

TAIR|locus:2204680 AT1G77520 [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 7.2e-15, P = 7.2e-15
 Identities = 42/99 (42%), Positives = 60/99 (60%)

Query:     2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENS-ATSKANSQIDVFMLTHS 60
             ILH W DE C+K+LKNC++S+  E GK+I+VE V P+ P+    +S     +D+ MLT  
Sbjct:   284 ILHDWGDEDCIKILKNCWKSL-PEKGKIIIVEFVTPKEPKGGDLSSNTVFAMDLLMLTQC 342

Query:    61 PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
               GK R+  +F NLA A+GF      C   +  V+EF+K
Sbjct:   343 SGGKERSLSQFENLAFASGFLRCEIICLAYSYSVIEFHK 381

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008171 "O-methyltransferase activity" evidence=IEA;ISS

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0005829 "cytosol" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026182001 SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (357 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	99
pfam00891	239	pfam00891, Methyltransf_2, O-methyltransferase	3e-25

>gnl|CDD|216177 pfam00891, Methyltransf_2, O-methyltransferase

 Score = 93.9 bits (234), Expect = 3e-25
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 3/76 (3%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
            +LH WSDE C+K+LK CYE++    GK+IVVE VLPE P++   ++    +D+ ML  +
Sbjct: 167 WVLHDWSDEDCVKILKRCYEAL-PPGGKVIVVEMVLPEDPDDDLETEVL-LLDLNMLVLN 224

Query: 61  PRGKVRTKHEFINLAT 76
             GK RT+ E+  L +
Sbjct: 225 G-GKERTEKEWRKLLS 239

This family includes a range of O-methyltransferases. These enzymes utilise S-adenosyl methionine. Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
KOG3178	342	consensus Hydroxyindole-O-methyltransferase and re	99.92
PF00891	241	Methyltransf_2: O-methyltransferase; InterPro: IPR	99.86
TIGR02716	306	C20_methyl_CrtF C-20 methyltransferase BchU. Membe	99.55
PF05891	218	Methyltransf_PK: AdoMet dependent proline di-methy	98.99
TIGR00740	239	methyltransferase, putative. A simple BLAST search	98.81
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	98.66
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	98.6
TIGR01934	223	MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis	98.58
PLN02232	160	ubiquinone biosynthesis methyltransferase	98.57
PLN02233	261	ubiquinone biosynthesis methyltransferase	98.54
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.51
PLN02490	340	MPBQ/MSBQ methyltransferase	98.49
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	98.41
PF13489	161	Methyltransf_23: Methyltransferase domain; PDB: 3J	98.37
PF06080	204	DUF938: Protein of unknown function (DUF938); Inte	98.34
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	98.27
PRK15068	322	tRNA mo(5)U34 methyltransferase; Provisional	98.21
TIGR00452	314	methyltransferase, putative. Known examples to dat	98.19
PLN02244	340	tocopherol O-methyltransferase	98.17
PLN02336	475	phosphoethanolamine N-methyltransferase	98.16
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	98.15
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	98.05
PRK04266	226	fibrillarin; Provisional	97.93
smart00828	224	PKS_MT Methyltransferase in polyketide synthase (P	97.82
PRK08317	241	hypothetical protein; Provisional	97.81
TIGR03438	301	probable methyltransferase. This model represents	97.76
PLN02336	475	phosphoethanolamine N-methyltransferase	97.74
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	97.7
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	97.69
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	97.54
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.45
PRK11207	197	tellurite resistance protein TehB; Provisional	97.43
KOG1540	296	consensus Ubiquinone biosynthesis methyltransferas	97.32
PF04672	267	Methyltransf_19: S-adenosyl methyltransferase; Int	97.32
PRK05134	233	bifunctional 3-demethylubiquinone-9 3-methyltransf	97.27
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	97.24
TIGR01983	224	UbiG ubiquinone biosynthesis O-methyltransferase.	97.13
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.06
KOG2361	264	consensus Predicted methyltransferase [General fun	96.99
PRK07580	230	Mg-protoporphyrin IX methyl transferase; Validated	96.88
PLN02585	315	magnesium protoporphyrin IX methyltransferase	96.78
KOG4300	252	consensus Predicted methyltransferase [General fun	96.71
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	96.7
PRK06202	232	hypothetical protein; Provisional	96.68
smart00138	264	MeTrc Methyltransferase, chemotaxis proteins. Meth	96.64
PRK06922	677	hypothetical protein; Provisional	96.62
PF12147	311	Methyltransf_20: Putative methyltransferase; Inter	96.55
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.47
TIGR02021	219	BchM-ChlM magnesium protoporphyrin O-methyltransfe	96.37
PRK12335	287	tellurite resistance protein TehB; Provisional	96.29
PTZ00146	293	fibrillarin; Provisional	96.1
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	95.91
PRK10611	287	chemotaxis methyltransferase CheR; Provisional	95.82
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	95.77
PF08003	315	Methyltransf_9: Protein of unknown function (DUF16	95.75
PLN03075	296	nicotianamine synthase; Provisional	95.67
PF06859	110	Bin3: Bicoid-interacting protein 3 (Bin3); InterPr	95.55
PF05219	265	DREV: DREV methyltransferase; InterPro: IPR007884	95.53
PRK05785	226	hypothetical protein; Provisional	95.4
TIGR02072	240	BioC biotin biosynthesis protein BioC. This enzyme	95.3
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	95.09
COG4798	238	Predicted methyltransferase [General function pred	94.97
PRK14968	188	putative methyltransferase; Provisional	94.92
PF01739	196	CheR: CheR methyltransferase, SAM binding domain;	94.69
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.47
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.17
PF11968	219	DUF3321: Putative methyltransferase (DUF3321); Int	94.16
PF05148	219	Methyltransf_8: Hypothetical methyltransferase; In	94.01
TIGR03439	319	methyl_EasF probable methyltransferase domain, Eas	93.82
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	93.65
PRK10258	251	biotin biosynthesis protein BioC; Provisional	93.64
TIGR03534	251	RF_mod_PrmC protein-(glutamine-N5) methyltransfera	93.61
PF05401	201	NodS: Nodulation protein S (NodS); InterPro: IPR00	93.43
KOG2899	288	consensus Predicted methyltransferase [General fun	92.97
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	92.95
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	91.9
TIGR00027	260	mthyl_TIGR00027 methyltransferase, putative, TIGR0	91.77
COG1352	268	CheR Methylase of chemotaxis methyl-accepting prot	91.01
PF01234	256	NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I	91.0
PRK13255	218	thiopurine S-methyltransferase; Reviewed	90.82
PRK15001	378	SAM-dependent 23S ribosomal RNA mG1835 methyltrans	90.48
PRK09328	275	N5-glutamine S-adenosyl-L-methionine-dependent met	90.39
KOG3045	325	consensus Predicted RNA methylase involved in rRNA	89.86
COG4627	185	Uncharacterized protein conserved in bacteria [Fun	89.48
PF10017	127	Methyltransf_33: Histidine-specific methyltransfer	88.7
PF07109	97	Mg-por_mtran_C: Magnesium-protoporphyrin IX methyl	87.99
PF05724	218	TPMT: Thiopurine S-methyltransferase (TPMT); Inter	87.97
cd02440	107	AdoMet_MTases S-adenosylmethionine-dependent methy	87.18
PRK13256	226	thiopurine S-methyltransferase; Reviewed	87.06
PF03291	331	Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971	86.76
PF11899	380	DUF3419: Protein of unknown function (DUF3419); In	86.37
PRK14967	223	putative methyltransferase; Provisional	86.17
PRK09489	342	rsmC 16S ribosomal RNA m2G1207 methyltransferase;	84.88
TIGR03587	204	Pse_Me-ase pseudaminic acid biosynthesis-associate	84.71
COG3315	297	O-Methyltransferase involved in polyketide biosynt	84.4
TIGR02081	194	metW methionine biosynthesis protein MetW. This pr	83.61
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	83.46
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	82.8
KOG1975	389	consensus mRNA cap methyltransferase [RNA processi	82.68
TIGR00438	188	rrmJ cell division protein FtsJ.	82.45
KOG2918	335	consensus Carboxymethyl transferase [Posttranslati	81.74
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	81.12
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	80.68
PF07942	270	N2227: N2227-like protein; InterPro: IPR012901 Thi	80.18

>KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only]

Probab=99.92  E-value=2.8e-25  Score=154.55  Aligned_cols=98  Identities=41%  Similarity=0.621  Sum_probs=87.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCC-CCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPE-LPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~-~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      ||||||+|++|++||+||+++| +|||+|+|.|.+.|+ .......+.....+|+.|++.+.+|++||.+||+.++.++|
T Consensus       244 WiLhdwtDedcvkiLknC~~sL-~~~GkIiv~E~V~p~e~~~dd~~s~v~~~~d~lm~~~~~~Gkert~~e~q~l~~~~g  322 (342)
T KOG3178|consen  244 WILHDWTDEDCVKILKNCKKSL-PPGGKIIVVENVTPEEDKFDDIDSSVTRDMDLLMLTQTSGGKERTLKEFQALLPEEG  322 (342)
T ss_pred             eecccCChHHHHHHHHHHHHhC-CCCCEEEEEeccCCCCCCccccccceeehhHHHHHHHhccceeccHHHHHhcchhhc
Confidence            7999999999999999999999 999999999999986 32222224456789999999987899999999999999999


Q ss_pred             CCeeEEEEcCCCeeEEEEEC
Q 037161           80 FSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        80 f~~~~~~~~~~~~~vie~~k   99 (99)
                      |.+..+...+..+++||++|
T Consensus       323 F~~~~~~~~~~~~~~Ie~~k  342 (342)
T KOG3178|consen  323 FPVCMVALTAYSYSVIEFHK  342 (342)
T ss_pred             CceeEEEeccCccchheeCC
Confidence            99999999999999999987

>PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=99.86  E-value=5e-22  Score=133.54  Aligned_cols=74  Identities=35%  Similarity=0.682  Sum_probs=63.4

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCC--ceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKED--GKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLAT   76 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pg--g~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~   76 (99)
                      ||||+|+|++|++||+|++++| +||  |+|+|+|.++++.+..+........+|++||+.+ +|++||.+||++||+
T Consensus       166 ~vLh~~~d~~~~~iL~~~~~al-~pg~~g~llI~e~~~~~~~~~~~~~~~~~~~dl~ml~~~-~G~~rt~~e~~~ll~  241 (241)
T PF00891_consen  166 HVLHDWSDEDCVKILRNAAAAL-KPGKDGRLLIIEMVLPDDRTGPPSAEMDALFDLNMLVLT-GGKERTEEEWEALLK  241 (241)
T ss_dssp             SSGGGS-HHHHHHHHHHHHHHS-EECTTEEEEEEEEEECSSSSSHHHHHHHHHHHHHHHHHH-SSS-EEHHHHHHHHH
T ss_pred             hhhhhcchHHHHHHHHHHHHHh-CCCCCCeEEEEeeccCCCCCCchHHHHHHHHHHHHHHhc-CCCCcCHHHHHHHhC
Confidence            6999999999999999999999 988  9999999999988766533222368999999998 799999999999985

The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A ....

>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU

Probab=99.55  E-value=2.1e-14  Score=99.63  Aligned_cols=82  Identities=10%  Similarity=0.244  Sum_probs=59.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhh-hhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKAN-SQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~-~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      +++|+|+++++.++|++++++| +|||+++|+|.+.++...+. ..... ...++.|+...  ..-++.+||.+||++||
T Consensus       223 ~~lh~~~~~~~~~il~~~~~~L-~pgG~l~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~e~~~ll~~aG  298 (306)
T TIGR02716       223 RILYSANEQLSTIMCKKAFDAM-RSGGRLLILDMVIDDPENPN-FDYLSHYILGAGMPFSV--LGFKEQARYKEILESLG  298 (306)
T ss_pred             hhhhcCChHHHHHHHHHHHHhc-CCCCEEEEEEeccCCCCCch-hhHHHHHHHHccccccc--ccCCCHHHHHHHHHHcC
Confidence            5799999999999999999999 99999999999887654322 11111 11222222221  23445799999999999


Q ss_pred             CCeeEEE
Q 037161           80 FSGIRFQ   86 (99)
Q Consensus        80 f~~~~~~   86 (99)
                      |+.++++
T Consensus       299 f~~v~~~  305 (306)
T TIGR02716       299 YKDVTMV  305 (306)
T ss_pred             CCeeEec
Confidence            9998764

Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d.

>PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like

Probab=98.99  E-value=1.2e-09  Score=72.81  Aligned_cols=72  Identities=24%  Similarity=0.332  Sum_probs=59.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |++-+.+|++.++.|++|+++| +|+|.|+|-|++...+.         ..+|-     .+++-.||.+.|.++|++||+
T Consensus       130 W~lghLTD~dlv~fL~RCk~~L-~~~G~IvvKEN~~~~~~---------~~~D~-----~DsSvTRs~~~~~~lF~~AGl  194 (218)
T PF05891_consen  130 WCLGHLTDEDLVAFLKRCKQAL-KPNGVIVVKENVSSSGF---------DEFDE-----EDSSVTRSDEHFRELFKQAGL  194 (218)
T ss_dssp             S-GGGS-HHHHHHHHHHHHHHE-EEEEEEEEEEEEESSSE---------EEEET-----TTTEEEEEHHHHHHHHHHCT-
T ss_pred             HhhccCCHHHHHHHHHHHHHhC-cCCcEEEEEecCCCCCC---------cccCC-----ccCeeecCHHHHHHHHHHcCC
Confidence            6788999999999999999999 99999999999977541         13442     468999999999999999999


Q ss_pred             CeeEEEE
Q 037161           81 SGIRFQC   87 (99)
Q Consensus        81 ~~~~~~~   87 (99)
                      ++++...
T Consensus       195 ~~v~~~~  201 (218)
T PF05891_consen  195 RLVKEEK  201 (218)
T ss_dssp             EEEEEEE
T ss_pred             EEEEecc
Confidence            9998754

; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B.

>TIGR00740 methyltransferase, putative

Probab=98.81  E-value=2.2e-09  Score=72.18  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=55.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhc-----------------CCCce
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH-----------------SPRGK   64 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~-----------------~~~g~   64 (99)
                      ++|.+++++..++|++++++| +|||++++.|.+.+++....  .   .+..+.+...                 ...-+
T Consensus       131 ~l~~~~~~~~~~~l~~i~~~L-kpgG~l~i~d~~~~~~~~~~--~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  204 (239)
T TIGR00740       131 TLQFLPPEDRIALLTKIYEGL-NPNGVLVLSEKFRFEDTKIN--H---LLIDLHHQFKRANGYSELEISQKRTALENVMR  204 (239)
T ss_pred             chhhCCHHHHHHHHHHHHHhc-CCCeEEEEeecccCCCHhHH--H---HHHHHHHHHHHHcCCCHHHHHHHHHHHhccCC
Confidence            578899989999999999999 99999999998766543211  0   1111111000                 00224


Q ss_pred             ecCHHHHHHHHHHcCCCeeEEE
Q 037161           65 VRTKHEFINLATAAGFSGIRFQ   86 (99)
Q Consensus        65 ~rt~~e~~~ll~~aGf~~~~~~   86 (99)
                      ..|.+|+.+++++|||+.++..
T Consensus       205 ~~s~~~~~~~l~~aGF~~~~~~  226 (239)
T TIGR00740       205 TDSIETHKARLKNVGFSHVELW  226 (239)
T ss_pred             CCCHHHHHHHHHHcCCchHHHH
Confidence            6799999999999999976653

A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily.

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=98.66  E-value=2.9e-07  Score=61.12  Aligned_cols=92  Identities=23%  Similarity=0.286  Sum_probs=61.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhh----cCCC------------cee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT----HSPR------------GKV   65 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~----~~~~------------g~~   65 (99)
                      ++|++++  ...+|+++++.| +|||++++.|...+....   .......+...++.    ...+            ...
T Consensus       130 ~l~~~~~--~~~~l~~~~~~L-~~gG~li~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (239)
T PRK00216        130 GLRNVPD--IDKALREMYRVL-KPGGRLVILEFSKPTNPP---LKKAYDFYLFKVLPLIGKLISKNAEAYSYLAESIRAF  203 (239)
T ss_pred             ccccCCC--HHHHHHHHHHhc-cCCcEEEEEEecCCCchH---HHHHHHHHHHhhhHHHHHHHcCCcHHHHHHHHHHHhC
Confidence            5677776  568899999999 999999999987654321   00000001000000    0001            234


Q ss_pred             cCHHHHHHHHHHcCCCeeEEEEcC-CCeeEEEEEC
Q 037161           66 RTKHEFINLATAAGFSGIRFQCFV-CNSWVMEFYK   99 (99)
Q Consensus        66 rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~k   99 (99)
                      ++.++|.++|++|||+.+++.... +..+++.++|
T Consensus       204 ~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~  238 (239)
T PRK00216        204 PDQEELAAMLEEAGFERVRYRNLTGGIVALHVGYK  238 (239)
T ss_pred             CCHHHHHHHHHhCCCceeeeeeeecCcEEEEEEec
Confidence            578999999999999999999865 6778888876

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=98.60  E-value=4.8e-07  Score=61.93  Aligned_cols=79  Identities=14%  Similarity=0.239  Sum_probs=55.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|++++++..++|+++++.| +|||++++.|...+......  .   ....  ..... .-...+.++|.++|++|||+
T Consensus       126 ~l~h~~~~d~~~~l~~i~r~L-kPGG~lvi~d~~~~~~~~~~--~---~~~~--~~~~~-~~~~~~~~~~~~~l~~aGF~  196 (263)
T PTZ00098        126 AILHLSYADKKKLFEKCYKWL-KPNGILLITDYCADKIENWD--E---EFKA--YIKKR-KYTLIPIQEYGDLIKSCNFQ  196 (263)
T ss_pred             hHHhCCHHHHHHHHHHHHHHc-CCCcEEEEEEeccccccCcH--H---HHHH--HHHhc-CCCCCCHHHHHHHHHHCCCC
Confidence            356678778899999999999 99999999998765432111  0   0111  11111 22346889999999999999


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      ++......
T Consensus       197 ~v~~~d~~  204 (263)
T PTZ00098        197 NVVAKDIS  204 (263)
T ss_pred             eeeEEeCc
Confidence            99987753

>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases

Probab=98.58  E-value=6.8e-07  Score=58.74  Aligned_cols=89  Identities=19%  Similarity=0.300  Sum_probs=59.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchH---hhhcC-------CC---------
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVF---MLTHS-------PR---------   62 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~---m~~~~-------~~---------   62 (99)
                      ++|+.++  ...+|+++++.| +|||++++.+...+... . .    ...++..   ++...       .+         
T Consensus       115 ~~~~~~~--~~~~l~~~~~~L-~~gG~l~~~~~~~~~~~-~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (223)
T TIGR01934       115 GLRNVTD--IQKALREMYRVL-KPGGRLVILEFSKPANA-L-L----KKFYKFYLKNVLPSIGGLISKNAEAYTYLPESI  185 (223)
T ss_pred             eeCCccc--HHHHHHHHHHHc-CCCcEEEEEEecCCCch-h-h----HHHHHHHHHHhhhhhhhhhcCCchhhHHHHHHH
Confidence            3566665  678999999999 99999999998654331 1 1    1111111   11100       00         


Q ss_pred             ceecCHHHHHHHHHHcCCCeeEEEEcCC-CeeEEEEEC
Q 037161           63 GKVRTKHEFINLATAAGFSGIRFQCFVC-NSWVMEFYK   99 (99)
Q Consensus        63 g~~rt~~e~~~ll~~aGf~~~~~~~~~~-~~~vie~~k   99 (99)
                      ....+.++|..+|+++||+.+++.++.. ...+++++|
T Consensus       186 ~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~  223 (223)
T TIGR01934       186 RAFPSQEELAAMLKEAGFEEVRYRSLTFGVAAIHVGKK  223 (223)
T ss_pred             HhCCCHHHHHHHHHHcCCccceeeeeecceeeEEEecC
Confidence            1234788999999999999999998865 467887775

Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.

>PLN02232 ubiquinone biosynthesis methyltransferase

Probab=98.57  E-value=2.1e-07  Score=59.35  Aligned_cols=94  Identities=16%  Similarity=0.063  Sum_probs=57.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhh---hhhchHhhhcC---------CCceecCHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKAN---SQIDVFMLTHS---------PRGKVRTKH   69 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~---~~~dl~m~~~~---------~~g~~rt~~   69 (99)
                      ++|+|+|  -.+.|+++++.| +|||+++|.|...++..-........   .......+...         +-..-.+.+
T Consensus        53 ~l~~~~d--~~~~l~ei~rvL-kpGG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~yl~~si~~f~~~~  129 (160)
T PLN02232         53 GLRNVVD--RLRAMKEMYRVL-KPGSRVSILDFNKSNQSVTTFMQGWMIDNVVVPVATVYDLAKEYEYLKYSINGYLTGE  129 (160)
T ss_pred             hhhcCCC--HHHHHHHHHHHc-CcCeEEEEEECCCCChHHHHHHHHHHccchHhhhhHHhCChHHHHhHHHHHHHCcCHH
Confidence            5788876  578999999999 99999999998755331100000000   00000000000         002345889


Q ss_pred             HHHHHHHHcCCCeeEEEEcC-CCeeEEEEE
Q 037161           70 EFINLATAAGFSGIRFQCFV-CNSWVMEFY   98 (99)
Q Consensus        70 e~~~ll~~aGf~~~~~~~~~-~~~~vie~~   98 (99)
                      |+.++|+++||+.++..... +..++..+.
T Consensus       130 el~~ll~~aGF~~~~~~~~~~g~~~~~~~~  159 (160)
T PLN02232        130 ELETLALEAGFSSACHYEISGGFMGNLVAM  159 (160)
T ss_pred             HHHHHHHHcCCCcceEEECcchHhHeeEee
Confidence            99999999999999887764 344554443

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=98.54  E-value=6.5e-07  Score=61.24  Aligned_cols=91  Identities=21%  Similarity=0.161  Sum_probs=58.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh--h-hcCCC-----------ceecC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM--L-THSPR-----------GKVRT   67 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m--~-~~~~~-----------g~~rt   67 (99)
                      ++|+++|  -.++|++++++| +|||+++|.|...++..-..  ......+...+  + .....           .+-+|
T Consensus       154 ~l~~~~d--~~~~l~ei~rvL-kpGG~l~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~y~~l~~s~~~f~s  228 (261)
T PLN02233        154 GLRNVVD--RLKAMQEMYRVL-KPGSRVSILDFNKSTQPFTT--SMQEWMIDNVVVPVATGYGLAKEYEYLKSSINEYLT  228 (261)
T ss_pred             ccccCCC--HHHHHHHHHHHc-CcCcEEEEEECCCCCcHHHH--HHHHHHHhhhhhHHHHHhCChHHHHHHHHHHHhcCC
Confidence            5788886  567899999999 99999999998755432111  00001111000  0 00000           23569


Q ss_pred             HHHHHHHHHHcCCCeeEEEEcCC-CeeEEEE
Q 037161           68 KHEFINLATAAGFSGIRFQCFVC-NSWVMEF   97 (99)
Q Consensus        68 ~~e~~~ll~~aGf~~~~~~~~~~-~~~vie~   97 (99)
                      .+|+.++++++||+.++...+.. ...+.-+
T Consensus       229 ~~el~~ll~~aGF~~~~~~~~~~g~~~~~~~  259 (261)
T PLN02233        229 GEELEKLALEAGFSSAKHYEISGGLMGNLVA  259 (261)
T ss_pred             HHHHHHHHHHCCCCEEEEEEcCCCeeEEEEE
Confidence            99999999999999999887754 4445444

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.51  E-value=9.4e-07  Score=60.39  Aligned_cols=76  Identities=17%  Similarity=0.303  Sum_probs=55.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.++|  ..++++++++.| +|||++++.|.+.... .+.     ....++.+...+ .+..++..+|.++|+++||.
T Consensus       155 v~~~~~d--~~~~l~~~~r~L-kpGG~l~i~~~~~~~~-~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~l~~aGf~  224 (272)
T PRK11873        155 VINLSPD--KERVFKEAFRVL-KPGGRFAISDVVLRGE-LPE-----EIRNDAELYAGC-VAGALQEEEYLAMLAEAGFV  224 (272)
T ss_pred             cccCCCC--HHHHHHHHHHHc-CCCcEEEEEEeeccCC-CCH-----HHHHhHHHHhcc-ccCCCCHHHHHHHHHHCCCC
Confidence            5666666  457899999999 9999999999875442 111     122344444333 56778999999999999999


Q ss_pred             eeEEEE
Q 037161           82 GIRFQC   87 (99)
Q Consensus        82 ~~~~~~   87 (99)
                      .+++..
T Consensus       225 ~v~i~~  230 (272)
T PRK11873        225 DITIQP  230 (272)
T ss_pred             ceEEEe
Confidence            988754

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=98.49  E-value=1e-06  Score=62.55  Aligned_cols=72  Identities=26%  Similarity=0.454  Sum_probs=52.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.|+|.+  ++|+++++.| +|||+++|.+.+.++...    .+  ...+..+       ...+.+|+.++++++||+
T Consensus       187 ~L~~~~d~~--~~L~e~~rvL-kPGG~LvIi~~~~p~~~~----~r--~~~~~~~-------~~~t~eEl~~lL~~aGF~  250 (340)
T PLN02490        187 SIEYWPDPQ--RGIKEAYRVL-KIGGKACLIGPVHPTFWL----SR--FFADVWM-------LFPKEEEYIEWFTKAGFK  250 (340)
T ss_pred             hhhhCCCHH--HHHHHHHHhc-CCCcEEEEEEecCcchhH----HH--Hhhhhhc-------cCCCHHHHHHHHHHCCCe
Confidence            578898864  6899999999 999999998765443211    11  1122211       125789999999999999


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      .+++..+.
T Consensus       251 ~V~i~~i~  258 (340)
T PLN02490        251 DVKLKRIG  258 (340)
T ss_pred             EEEEEEcC
Confidence            99998764

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=98.41  E-value=2.2e-06  Score=57.07  Aligned_cols=92  Identities=20%  Similarity=0.306  Sum_probs=58.9

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh----------------hhcCCCcee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM----------------LTHSPRGKV   65 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m----------------~~~~~~g~~   65 (99)
                      .+|++++.  .++|+++.+.| +|||++++.|...+...  .........+...+                +... ....
T Consensus       123 ~l~~~~~~--~~~l~~~~~~L-k~gG~l~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~  196 (231)
T TIGR02752       123 GLRNVPDY--MQVLREMYRVV-KPGGKVVCLETSQPTIP--GFKQLYFFYFKYIMPLFGKLFAKSYKEYSWLQES-TRDF  196 (231)
T ss_pred             ccccCCCH--HHHHHHHHHHc-CcCeEEEEEECCCCCCh--HHHHHHHHHHcChhHHhhHHhcCCHHHHHHHHHH-HHHc
Confidence            35666663  57999999999 99999999887544321  10000000011000                0000 1234


Q ss_pred             cCHHHHHHHHHHcCCCeeEEEEcC-CCeeEEEEEC
Q 037161           66 RTKHEFINLATAAGFSGIRFQCFV-CNSWVMEFYK   99 (99)
Q Consensus        66 rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~k   99 (99)
                      .|.+++.++|+++||+++++.... +..+++-++|
T Consensus       197 ~~~~~l~~~l~~aGf~~~~~~~~~~g~~~~~~~~~  231 (231)
T TIGR02752       197 PGMDELAEMFQEAGFKDVEVKSYTGGVAAMHMGFK  231 (231)
T ss_pred             CCHHHHHHHHHHcCCCeeEEEEcccceEEEEEEEC
Confidence            577899999999999999998876 6677877776

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C

Probab=98.37  E-value=1.3e-06  Score=54.49  Aligned_cols=75  Identities=16%  Similarity=0.122  Sum_probs=53.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++||+.+|  ...+|+++++.| +|||.+++.+...+.. .+.   .. .......... .....+|.++|..+++++||
T Consensus        86 ~~l~~~~d--~~~~l~~l~~~L-kpgG~l~~~~~~~~~~-~~~---~~-~~~~~~~~~~-~~~~~~~~~~~~~ll~~~G~  156 (161)
T PF13489_consen   86 DVLEHLPD--PEEFLKELSRLL-KPGGYLVISDPNRDDP-SPR---SF-LKWRYDRPYG-GHVHFFSPDELRQLLEQAGF  156 (161)
T ss_dssp             SSGGGSSH--HHHHHHHHHHCE-EEEEEEEEEEEBTTSH-HHH---HH-HHCCGTCHHT-TTTEEBBHHHHHHHHHHTTE
T ss_pred             HHHhhccc--HHHHHHHHHHhc-CCCCEEEEEEcCCcch-hhh---HH-HhcCCcCccC-ceeccCCHHHHHHHHHHCCC
Confidence            47888886  889999999999 9999999998765431 000   00 1111111111 25689999999999999999


Q ss_pred             CeeE
Q 037161           81 SGIR   84 (99)
Q Consensus        81 ~~~~   84 (99)
                      ++++
T Consensus       157 ~iv~  160 (161)
T PF13489_consen  157 EIVE  160 (161)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9875

...

>PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes

Probab=98.34  E-value=6.3e-06  Score=54.69  Aligned_cols=95  Identities=19%  Similarity=0.174  Sum_probs=75.6

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |++|--+-+.+..+++.+.+.| +|||.++++-.+..++.-.+   .-...||-.+-.-......|..++..++.+++||
T Consensus       110 N~lHI~p~~~~~~lf~~a~~~L-~~gG~L~~YGPF~~~G~~ts---~SN~~FD~sLr~rdp~~GiRD~e~v~~lA~~~GL  185 (204)
T PF06080_consen  110 NMLHISPWSAVEGLFAGAARLL-KPGGLLFLYGPFNRDGKFTS---ESNAAFDASLRSRDPEWGIRDIEDVEALAAAHGL  185 (204)
T ss_pred             hHHHhcCHHHHHHHHHHHHHhC-CCCCEEEEeCCcccCCEeCC---cHHHHHHHHHhcCCCCcCccCHHHHHHHHHHCCC
Confidence            5788888899999999999999 99999999999877653221   1235677766554457889999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      +.++.+..+.+.-++..+|
T Consensus       186 ~l~~~~~MPANN~~Lvfrk  204 (204)
T PF06080_consen  186 ELEEDIDMPANNLLLVFRK  204 (204)
T ss_pred             ccCcccccCCCCeEEEEeC
Confidence            9999999887655555444

The function of this family is unknown.

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=98.27  E-value=4.9e-07  Score=61.05  Aligned_cols=92  Identities=20%  Similarity=0.252  Sum_probs=29.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhc----------------hHhhhcCCCcee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQID----------------VFMLTHSPRGKV   65 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~d----------------l~m~~~~~~g~~   65 (99)
                      .||+.+|  -.+.|++++++| +|||+++|+|...|+.+  .....+...+.                ...+..+ =-+-
T Consensus       125 glrn~~d--~~~~l~E~~RVL-kPGG~l~ile~~~p~~~--~~~~~~~~y~~~ilP~~g~l~~~~~~~Y~yL~~S-i~~f  198 (233)
T PF01209_consen  125 GLRNFPD--RERALREMYRVL-KPGGRLVILEFSKPRNP--LLRALYKFYFKYILPLIGRLLSGDREAYRYLPES-IRRF  198 (233)
T ss_dssp             -GGG-SS--HHHHHHHHHHHE-EEEEEEEEEEEEB-SSH--HHHHHHHH-------------------------------
T ss_pred             hHHhhCC--HHHHHHHHHHHc-CCCeEEEEeeccCCCCc--hhhceeeeeecccccccccccccccccccccccc-cccc
Confidence            4788887  456899999999 99999999999877542  10000000000                0011111 1234


Q ss_pred             cCHHHHHHHHHHcCCCeeEEEEcC-CCeeEEEEEC
Q 037161           66 RTKHEFINLATAAGFSGIRFQCFV-CNSWVMEFYK   99 (99)
Q Consensus        66 rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~k   99 (99)
                      .+.+|+.++++++||+.++..++. +..++..+.|
T Consensus       199 ~~~~~~~~~l~~~Gf~~v~~~~~~~G~~~i~~g~K  233 (233)
T PF01209_consen  199 PSPEELKELLEEAGFKNVEYRPLTFGIVTIHVGTK  233 (233)
T ss_dssp             -----------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccCC
Confidence            468899999999999999987764 5566666655

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional

Probab=98.21  E-value=1.4e-05  Score=56.25  Aligned_cols=78  Identities=17%  Similarity=0.176  Sum_probs=52.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      +||+..|  -..+|++++++| +|||++++-+.+++.......... .....  | ..  .-..+|.+++.+|++++||+
T Consensus       198 vl~H~~d--p~~~L~~l~~~L-kpGG~lvl~~~~i~~~~~~~l~p~-~~y~~--~-~~--~~~lps~~~l~~~L~~aGF~  268 (322)
T PRK15068        198 VLYHRRS--PLDHLKQLKDQL-VPGGELVLETLVIDGDENTVLVPG-DRYAK--M-RN--VYFIPSVPALKNWLERAGFK  268 (322)
T ss_pred             hhhccCC--HHHHHHHHHHhc-CCCcEEEEEEEEecCCCccccCch-hHHhc--C-cc--ceeCCCHHHHHHHHHHcCCc
Confidence            6777776  457899999999 999999887666665432210000 00001  1 00  11346899999999999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      .+++...
T Consensus       269 ~i~~~~~  275 (322)
T PRK15068        269 DVRIVDV  275 (322)
T ss_pred             eEEEEeC
Confidence            9998765

>TIGR00452 methyltransferase, putative

Probab=98.19  E-value=1.3e-05  Score=56.36  Aligned_cols=78  Identities=17%  Similarity=0.136  Sum_probs=52.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      +||++++  -...|++++++| +|||++++.+.+++.......... ..  .-.|. +  .-...|.+++..|++++||+
T Consensus       197 vL~H~~d--p~~~L~el~r~L-kpGG~Lvletl~i~g~~~~~l~p~-~r--y~k~~-n--v~flpS~~~L~~~L~~aGF~  267 (314)
T TIGR00452       197 VLYHRKS--PLEHLKQLKHQL-VIKGELVLETLVIDGDLNTVLVPK-DR--YAKMK-N--VYFIPSVSALKNWLEKVGFE  267 (314)
T ss_pred             hhhccCC--HHHHHHHHHHhc-CCCCEEEEEEEEecCccccccCch-HH--HHhcc-c--cccCCCHHHHHHHHHHCCCe
Confidence            6777876  467899999999 999999998877764422110000 00  00111 1  01235899999999999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      .+++...
T Consensus       268 ~V~i~~~  274 (314)
T TIGR00452       268 NFRILDV  274 (314)
T ss_pred             EEEEEec
Confidence            9998765

Known examples to date are restricted to the proteobacteria.

>PLN02244 tocopherol O-methyltransferase

Probab=98.17  E-value=2.2e-05  Score=55.65  Aligned_cols=84  Identities=14%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCC--CchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPE--NSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~--~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      .+|+++|  ..++|+++++.| +|||+++|.+........  ..........++-...... .....+.++|.++++++|
T Consensus       195 ~~~h~~d--~~~~l~e~~rvL-kpGG~lvi~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~-~p~~~s~~~~~~~l~~aG  270 (340)
T PLN02244        195 SGEHMPD--KRKFVQELARVA-APGGRIIIVTWCHRDLEPGETSLKPDEQKLLDKICAAYY-LPAWCSTSDYVKLAESLG  270 (340)
T ss_pred             chhccCC--HHHHHHHHHHHc-CCCcEEEEEEecccccccccccCCHHHHHHHHHHHhhcc-CCCCCCHHHHHHHHHHCC
Confidence            4677877  568999999999 999999999875432111  0000000111111111100 112358999999999999


Q ss_pred             CCeeEEEEcC
Q 037161           80 FSGIRFQCFV   89 (99)
Q Consensus        80 f~~~~~~~~~   89 (99)
                      |+++++....
T Consensus       271 f~~v~~~d~s  280 (340)
T PLN02244        271 LQDIKTEDWS  280 (340)
T ss_pred             CCeeEeeeCc
Confidence            9999987653

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=98.16  E-value=1.1e-05  Score=59.08  Aligned_cols=75  Identities=11%  Similarity=0.181  Sum_probs=53.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|+++|  -.++|+++++.| +|||+++|.|..........   ...   ..  +... +...++.++|.++++++||+
T Consensus       341 ~l~h~~d--~~~~l~~~~r~L-kpgG~l~i~~~~~~~~~~~~---~~~---~~--~~~~-g~~~~~~~~~~~~l~~aGF~  408 (475)
T PLN02336        341 TILHIQD--KPALFRSFFKWL-KPGGKVLISDYCRSPGTPSP---EFA---EY--IKQR-GYDLHDVQAYGQMLKDAGFD  408 (475)
T ss_pred             cccccCC--HHHHHHHHHHHc-CCCeEEEEEEeccCCCCCcH---HHH---HH--HHhc-CCCCCCHHHHHHHHHHCCCe
Confidence            5677776  458999999999 99999999998765432211   111   11  1112 45678999999999999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      ++.+...
T Consensus       409 ~i~~~d~  415 (475)
T PLN02336        409 DVIAEDR  415 (475)
T ss_pred             eeeeecc
Confidence            9977653

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=98.15  E-value=9.6e-06  Score=54.95  Aligned_cols=82  Identities=16%  Similarity=0.090  Sum_probs=53.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhch-----------H-hh-hcCCCceecCH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDV-----------F-ML-THSPRGKVRTK   68 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl-----------~-m~-~~~~~g~~rt~   68 (99)
                      ++|..++++..+++++++++| +|||.+++.|.+.+++...... ......+.           . +. .....-..-|.
T Consensus       134 ~l~~l~~~~~~~~l~~i~~~L-kpGG~l~l~e~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~ei~~~~~~~~~~~~~~~~  211 (247)
T PRK15451        134 TLQFLEPSERQALLDKIYQGL-NPGGALVLSEKFSFEDAKVGEL-LFNMHHDFKRANGYSELEISQKRSMLENVMLTDSV  211 (247)
T ss_pred             HHHhCCHHHHHHHHHHHHHhc-CCCCEEEEEEecCCCcchhHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcccCCH
Confidence            578888888899999999999 9999999999876554321100 00000000           0 00 00001234589


Q ss_pred             HHHHHHHHHcCCCeeEE
Q 037161           69 HEFINLATAAGFSGIRF   85 (99)
Q Consensus        69 ~e~~~ll~~aGf~~~~~   85 (99)
                      ++..+||++|||+.+..
T Consensus       212 ~~~~~~L~~aGF~~v~~  228 (247)
T PRK15451        212 ETHKARLHKAGFEHSEL  228 (247)
T ss_pred             HHHHHHHHHcCchhHHH
Confidence            99999999999987654

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=98.05  E-value=6.5e-05  Score=51.02  Aligned_cols=91  Identities=24%  Similarity=0.282  Sum_probs=58.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchH-hhhcC----------------CCce
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVF-MLTHS----------------PRGK   64 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~-m~~~~----------------~~g~   64 (99)
                      -||+.+|  -.+.|+.++++| +|||+++|+|...|+.+...   .....+.+. .+-..                ..-+
T Consensus       128 glrnv~d--~~~aL~E~~RVl-KpgG~~~vle~~~p~~~~~~---~~~~~~~~~~v~P~~g~~~~~~~~~y~yL~eSi~~  201 (238)
T COG2226         128 GLRNVTD--IDKALKEMYRVL-KPGGRLLVLEFSKPDNPVLR---KAYILYYFKYVLPLIGKLVAKDAEAYEYLAESIRR  201 (238)
T ss_pred             hhhcCCC--HHHHHHHHHHhh-cCCeEEEEEEcCCCCchhhH---HHHHHHHHHhHhhhhceeeecChHHHHHHHHHHHh
Confidence            3677776  789999999999 99999999998877553221   111112222 11111                0122


Q ss_pred             ecCHHHHHHHHHHcCCCeeEEEEcC-CCeeEEEEE
Q 037161           65 VRTKHEFINLATAAGFSGIRFQCFV-CNSWVMEFY   98 (99)
Q Consensus        65 ~rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~   98 (99)
                      .-+.+++.++++.+||+.+....+. +...+.-+.
T Consensus       202 ~p~~~~l~~~~~~~gf~~i~~~~~~~G~~~l~~g~  236 (238)
T COG2226         202 FPDQEELKQMIEKAGFEEVRYENLTFGIVALHRGY  236 (238)
T ss_pred             CCCHHHHHHHHHhcCceEEeeEeeeeeeEEEEEEe
Confidence            3467889999999999999866654 344444443

>PRK04266 fibrillarin; Provisional

Probab=97.93  E-value=6.5e-05  Score=50.58  Aligned_cols=67  Identities=19%  Similarity=0.148  Sum_probs=44.9

Q ss_pred             ccccCChH-HHHHHHHHHHHhccCCCceEEEE-eeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            2 ILHAWSDE-HCLKLLKNCYESINKEDGKLIVV-EAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw~d~-~~~~iL~~~~~al~~pgg~l~I~-e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      |+|+.++. +...+|+++++.| +|||+++|. ..    .+           .|...     .. .|..++..++++++|
T Consensus       145 i~~d~~~p~~~~~~L~~~~r~L-KpGG~lvI~v~~----~~-----------~d~~~-----~~-~~~~~~~~~~l~~aG  202 (226)
T PRK04266        145 IYQDVAQPNQAEIAIDNAEFFL-KDGGYLLLAIKA----RS-----------IDVTK-----DP-KEIFKEEIRKLEEGG  202 (226)
T ss_pred             EEECCCChhHHHHHHHHHHHhc-CCCcEEEEEEec----cc-----------ccCcC-----CH-HHHHHHHHHHHHHcC
Confidence            57777654 3456789999999 999999994 32    10           11100     01 122355679999999


Q ss_pred             CCeeEEEEcCC
Q 037161           80 FSGIRFQCFVC   90 (99)
Q Consensus        80 f~~~~~~~~~~   90 (99)
                      |+.++...+..
T Consensus       203 F~~i~~~~l~p  213 (226)
T PRK04266        203 FEILEVVDLEP  213 (226)
T ss_pred             CeEEEEEcCCC
Confidence            99999987753

>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes

Probab=97.82  E-value=0.00012  Score=48.46  Aligned_cols=71  Identities=15%  Similarity=0.248  Sum_probs=50.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|++++  -..+|+++++.| +|||++++.+...+.. .+.  .     .+     .. .....|..+|.++++++||+
T Consensus        76 ~l~~~~~--~~~~l~~~~~~L-kpgG~l~i~~~~~~~~-~~~--~-----~~-----~~-~~~~~s~~~~~~~l~~~Gf~  138 (224)
T smart00828       76 VIHHIKD--KMDLFSNISRHL-KDGGHLVLADFIANLL-SAI--E-----HE-----ET-TSYLVTREEWAELLARNNLR  138 (224)
T ss_pred             HHHhCCC--HHHHHHHHHHHc-CCCCEEEEEEcccccC-ccc--c-----cc-----cc-ccccCCHHHHHHHHHHCCCe
Confidence            4566666  468999999999 9999999998753321 110  0     00     00 12256789999999999999


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      +++...+.
T Consensus       139 ~~~~~~~~  146 (224)
T smart00828      139 VVEGVDAS  146 (224)
T ss_pred             EEEeEECc
Confidence            99988764

>PRK08317 hypothetical protein; Provisional

Probab=97.81  E-value=0.00015  Score=47.76  Aligned_cols=81  Identities=12%  Similarity=0.225  Sum_probs=49.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCC-CCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELP-ENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~-~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++|+++|  -..+++++++.| +|||.+++.+....... .+............  +... ....++..+|.++++++||
T Consensus        96 ~~~~~~~--~~~~l~~~~~~L-~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~l~~aGf  169 (241)
T PRK08317         96 VLQHLED--PARALAEIARVL-RPGGRVVVLDTDWDTLVWHSGDRALMRKILNF--WSDH-FADPWLGRRLPGLFREAGL  169 (241)
T ss_pred             hhhccCC--HHHHHHHHHHHh-cCCcEEEEEecCCCceeecCCChHHHHHHHHH--HHhc-CCCCcHHHHHHHHHHHcCC
Confidence            5667776  467899999999 99999999885322110 00000011111111  1111 3345567799999999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      +.+++...
T Consensus       170 ~~~~~~~~  177 (241)
T PRK08317        170 TDIEVEPY  177 (241)
T ss_pred             CceeEEEE
Confidence            98876543

>TIGR03438 probable methyltransferase

Probab=97.76  E-value=0.00017  Score=50.33  Aligned_cols=29  Identities=14%  Similarity=0.383  Sum_probs=26.9

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEE
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIV   31 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I   31 (99)
                      .+|+++++++..+|++++++| +|||.++|
T Consensus       147 ~~~~~~~~e~~~~L~~i~~~L-~pgG~~li  175 (301)
T TIGR03438       147 TIGNFTPEEAVAFLRRIRQLL-GPGGGLLI  175 (301)
T ss_pred             cccCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence            578899999999999999999 99999886

This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=97.74  E-value=0.0001  Score=54.16  Aligned_cols=69  Identities=12%  Similarity=0.082  Sum_probs=53.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.++|++..++|+++++.| +|||++++.|..........      .      .  .+....|+..+|.++|.++||.
T Consensus       112 ~l~~l~~~~~~~~l~~~~r~L-k~gG~l~~~d~~~~~~~~~~------~------~--~~~~~~~~~~~~~~~f~~~~~~  176 (475)
T PLN02336        112 LLMYLSDKEVENLAERMVKWL-KVGGYIFFRESCFHQSGDSK------R------K--NNPTHYREPRFYTKVFKECHTR  176 (475)
T ss_pred             hHHhCCHHHHHHHHHHHHHhc-CCCeEEEEEeccCCCCCccc------c------c--CCCCeecChHHHHHHHHHheec
Confidence            578889998999999999999 99999999998654332110      0      1  1245668899999999999998


Q ss_pred             eeEE
Q 037161           82 GIRF   85 (99)
Q Consensus        82 ~~~~   85 (99)
                      ....
T Consensus       177 ~~~~  180 (475)
T PLN02336        177 DEDG  180 (475)
T ss_pred             cCCC
Confidence            8744

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=97.70  E-value=9e-05  Score=52.37  Aligned_cols=81  Identities=9%  Similarity=0.026  Sum_probs=50.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC---CCceecCHHHHHHHHHHc
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS---PRGKVRTKHEFINLATAA   78 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~---~~g~~rt~~e~~~ll~~a   78 (99)
                      |||+++|.  ..+|+++++.| +|||.++|......  .. .........-.+.-++..   ...+-+|.+|+.++++++
T Consensus       207 vLeHv~d~--~~~L~~l~r~L-kPGG~liist~nr~--~~-~~~~~i~~~eyi~~~lp~gth~~~~f~tp~eL~~lL~~a  280 (322)
T PLN02396        207 VIEHVANP--AEFCKSLSALT-IPNGATVLSTINRT--MR-AYASTIVGAEYILRWLPKGTHQWSSFVTPEELSMILQRA  280 (322)
T ss_pred             HHHhcCCH--HHHHHHHHHHc-CCCcEEEEEECCcC--HH-HHHHhhhhHHHHHhcCCCCCcCccCCCCHHHHHHHHHHc
Confidence            67888875  57999999999 99999998764211  00 000000000000001111   012467999999999999


Q ss_pred             CCCeeEEEEc
Q 037161           79 GFSGIRFQCF   88 (99)
Q Consensus        79 Gf~~~~~~~~   88 (99)
                      ||+++++..+
T Consensus       281 Gf~i~~~~G~  290 (322)
T PLN02396        281 SVDVKEMAGF  290 (322)
T ss_pred             CCeEEEEeee
Confidence            9999998654

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=97.69  E-value=6.2e-05  Score=51.12  Aligned_cols=85  Identities=11%  Similarity=0.065  Sum_probs=49.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCch-hhhhhhhhchHhhhc----CCCceecCHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSA-TSKANSQIDVFMLTH----SPRGKVRTKHEFINLAT   76 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~-~~~~~~~~dl~m~~~----~~~g~~rt~~e~~~ll~   76 (99)
                      +||.++|.  .++|+++++.| +|||+++|.........-... ...... .+-.+...    ..-....+.+++.++|+
T Consensus       121 vl~~~~~~--~~~l~~~~~~L-kpgG~l~i~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~l~~~l~  196 (255)
T PRK11036        121 VLEWVADP--KSVLQTLWSVL-RPGGALSLMFYNANGLLMHNMVAGNFDY-VQAGMPKRKKRTLSPDYPLDPEQVYQWLE  196 (255)
T ss_pred             HHHhhCCH--HHHHHHHHHHc-CCCeEEEEEEECccHHHHHHHHccChHH-HHhcCccccccCCCCCCCCCHHHHHHHHH
Confidence            56767664  47899999999 999999987543221000000 000000 00000000    00122467899999999


Q ss_pred             HcCCCeeEEEEcCC
Q 037161           77 AAGFSGIRFQCFVC   90 (99)
Q Consensus        77 ~aGf~~~~~~~~~~   90 (99)
                      ++||+++.+..+..
T Consensus       197 ~aGf~~~~~~gi~~  210 (255)
T PRK11036        197 EAGWQIMGKTGVRV  210 (255)
T ss_pred             HCCCeEeeeeeEEE
Confidence            99999998776543

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=97.54  E-value=0.00037  Score=47.26  Aligned_cols=78  Identities=13%  Similarity=0.093  Sum_probs=44.9

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhh-----hchHh--hhcCCCceecCHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQ-----IDVFM--LTHSPRGKVRTKHEFINL   74 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~-----~dl~m--~~~~~~g~~rt~~e~~~l   74 (99)
                      ++|..+|  -.++|+++++.| +|||++++....   ....+........     +.-.+  +....+....+.++|.++
T Consensus        98 ~l~~~~d--~~~~l~~~~~~L-kpgG~l~~~~~~---~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~  171 (255)
T PRK14103         98 ALQWVPE--HADLLVRWVDEL-APGSWIAVQVPG---NFDAPSHAAVRALARREPWAKLLRDIPFRVGAVVQTPAGYAEL  171 (255)
T ss_pred             hhhhCCC--HHHHHHHHHHhC-CCCcEEEEEcCC---CcCChhHHHHHHHhccCchhHHhcccccccCcCCCCHHHHHHH
Confidence            5676666  367899999999 999999886321   1111100000000     11000  000112345689999999


Q ss_pred             HHHcCCCeeEE
Q 037161           75 ATAAGFSGIRF   85 (99)
Q Consensus        75 l~~aGf~~~~~   85 (99)
                      |++|||++...
T Consensus       172 l~~aGf~v~~~  182 (255)
T PRK14103        172 LTDAGCKVDAW  182 (255)
T ss_pred             HHhCCCeEEEE
Confidence            99999985443

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.45  E-value=0.0002  Score=49.47  Aligned_cols=83  Identities=13%  Similarity=0.198  Sum_probs=52.7

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG   82 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~   82 (99)
                      +.+.+.+.-...+++|.+.| +|||++++.....++.............+.-  .+ +++|..-+.+++...++++||++
T Consensus       137 ~Ehvg~~~~~~~f~~~~~~L-kpgG~~~lq~i~~~~~~~~~~~~~~~~~i~k--yi-FPgg~lps~~~~~~~~~~~~l~v  212 (273)
T PF02353_consen  137 FEHVGRKNYPAFFRKISRLL-KPGGRLVLQTITHRDPPYHAERRSSSDFIRK--YI-FPGGYLPSLSEILRAAEDAGLEV  212 (273)
T ss_dssp             GGGTCGGGHHHHHHHHHHHS-ETTEEEEEEEEEE--HHHHHCTTCCCHHHHH--HT-STTS---BHHHHHHHHHHTT-EE
T ss_pred             hhhcChhHHHHHHHHHHHhc-CCCcEEEEEecccccccchhhcCCCceEEEE--ee-CCCCCCCCHHHHHHHHhcCCEEE
Confidence            44556677789999999999 9999999988776654211000000012222  22 35899999999999999999999


Q ss_pred             eEEEEcC
Q 037161           83 IRFQCFV   89 (99)
Q Consensus        83 ~~~~~~~   89 (99)
                      ..+...+
T Consensus       213 ~~~~~~~  219 (273)
T PF02353_consen  213 EDVENLG  219 (273)
T ss_dssp             EEEEE-H
T ss_pred             EEEEEcC
Confidence            9887653

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=97.43  E-value=0.0014  Score=43.02  Aligned_cols=66  Identities=14%  Similarity=0.103  Sum_probs=47.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.+++++...++++++++| +|||++++++.+-+++...+      .  .        --...+.+|+.++++  ||+
T Consensus       104 ~~~~~~~~~~~~~l~~i~~~L-kpgG~~~~~~~~~~~~~~~~------~--~--------~~~~~~~~el~~~~~--~~~  164 (197)
T PRK11207        104 VLMFLEAKTIPGLIANMQRCT-KPGGYNLIVAAMDTADYPCT------V--G--------FPFAFKEGELRRYYE--GWE  164 (197)
T ss_pred             chhhCCHHHHHHHHHHHHHHc-CCCcEEEEEEEecCCCCCCC------C--C--------CCCccCHHHHHHHhC--CCe
Confidence            568788889999999999999 99999888776544331100      0  0        012357788888887  898


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      ++...
T Consensus       165 ~~~~~  169 (197)
T PRK11207        165 MVKYN  169 (197)
T ss_pred             EEEee
Confidence            87763

>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism]

Probab=97.32  E-value=0.00071  Score=46.62  Aligned_cols=78  Identities=22%  Similarity=0.308  Sum_probs=49.2

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-CCCchhhh-------------hhhhhchHhhhcCCCceecCH
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-PENSATSK-------------ANSQIDVFMLTHSPRGKVRTK   68 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-~~~~~~~~-------------~~~~~dl~m~~~~~~g~~rt~   68 (99)
                      +-+|+|  ..+.|+.++++| +||||+.++|+--.+. .-...+.+             ......-+.|+.. =-+--+.
T Consensus       187 IRN~th--~~k~l~EAYRVL-KpGGrf~cLeFskv~~~~l~~fy~~ysf~VlpvlG~~iagd~~sYqYLveS-I~rfp~q  262 (296)
T KOG1540|consen  187 IRNVTH--IQKALREAYRVL-KPGGRFSCLEFSKVENEPLKWFYDQYSFDVLPVLGEIIAGDRKSYQYLVES-IRRFPPQ  262 (296)
T ss_pred             eecCCC--HHHHHHHHHHhc-CCCcEEEEEEccccccHHHHHHHHhhhhhhhchhhHhhhhhHhhhhhHHhh-hhcCCCH
Confidence            356777  789999999999 9999999999754331 11000000             0000111122221 1234567


Q ss_pred             HHHHHHHHHcCCCeeE
Q 037161           69 HEFINLATAAGFSGIR   84 (99)
Q Consensus        69 ~e~~~ll~~aGf~~~~   84 (99)
                      +|+..+.++|||..+.
T Consensus       263 e~f~~miedaGF~~~~  278 (296)
T KOG1540|consen  263 EEFASMIEDAGFSSVN  278 (296)
T ss_pred             HHHHHHHHHcCCcccc
Confidence            8999999999999997

>PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins

Probab=97.32  E-value=0.00032  Score=48.36  Aligned_cols=74  Identities=14%  Similarity=0.214  Sum_probs=44.5

Q ss_pred             ccccCCh-HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |||..+| ++...+++..+++| +|||.|+|....-+..  +...   ....++.--.. ..+..||.+|+.++|.  ||
T Consensus       159 vLh~v~D~~dp~~iv~~l~d~l-apGS~L~ish~t~d~~--p~~~---~~~~~~~~~~~-~~~~~Rs~~ei~~~f~--g~  229 (267)
T PF04672_consen  159 VLHFVPDDDDPAGIVARLRDAL-APGSYLAISHATDDGA--PERA---EALEAVYAQAG-SPGRPRSREEIAAFFD--GL  229 (267)
T ss_dssp             -GGGS-CGCTHHHHHHHHHCCS--TT-EEEEEEEB-TTS--HHHH---HHHHHHHHHCC-S----B-HHHHHHCCT--TS
T ss_pred             eeccCCCccCHHHHHHHHHHhC-CCCceEEEEecCCCCC--HHHH---HHHHHHHHcCC-CCceecCHHHHHHHcC--CC
Confidence            7888877 78999999999999 9999999987764432  1111   12222222223 3689999999999998  88


Q ss_pred             CeeE
Q 037161           81 SGIR   84 (99)
Q Consensus        81 ~~~~   84 (99)
                      +.+.
T Consensus       230 elve  233 (267)
T PF04672_consen  230 ELVE  233 (267)
T ss_dssp             EE-T
T ss_pred             ccCC
Confidence            7764

; PDB: 3GIW_A 3GO4_A 2QE6_A.

>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional

Probab=97.27  E-value=0.001  Score=44.29  Aligned_cols=79  Identities=15%  Similarity=0.122  Sum_probs=46.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhh--hhhchHhhhc--CCCceecCHHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKAN--SQIDVFMLTH--SPRGKVRTKHEFINLATA   77 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~--~~~dl~m~~~--~~~g~~rt~~e~~~ll~~   77 (99)
                      ++++.++  ...+|+++.+.| +|||++++...-   . .........  ...-+.....  ...++..+..+|.++++.
T Consensus       123 ~l~~~~~--~~~~l~~~~~~L-~~gG~l~v~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  195 (233)
T PRK05134        123 MLEHVPD--PASFVRACAKLV-KPGGLVFFSTLN---R-NLKSYLLAIVGAEYVLRMLPKGTHDYKKFIKPSELAAWLRQ  195 (233)
T ss_pred             HhhccCC--HHHHHHHHHHHc-CCCcEEEEEecC---C-ChHHHHHHHhhHHHHhhhcCcccCchhhcCCHHHHHHHHHH
Confidence            3555555  457899999999 999998876431   1 111000000  0000011100  012345588999999999


Q ss_pred             cCCCeeEEEE
Q 037161           78 AGFSGIRFQC   87 (99)
Q Consensus        78 aGf~~~~~~~   87 (99)
                      +||+++....
T Consensus       196 ~Gf~~v~~~~  205 (233)
T PRK05134        196 AGLEVQDITG  205 (233)
T ss_pred             CCCeEeeeee
Confidence            9999998754

>TIGR00477 tehB tellurite resistance protein TehB

Probab=97.24  E-value=0.003  Score=41.36  Aligned_cols=66  Identities=8%  Similarity=0.087  Sum_probs=47.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|..++++...+++++++.| +|||+++|++...++.. +..       ..        .....+.+|..++|+  +|+
T Consensus       103 ~~~~~~~~~~~~~l~~~~~~L-kpgG~lli~~~~~~~~~-~~~-------~~--------~~~~~~~~el~~~f~--~~~  163 (195)
T TIGR00477       103 VFMFLQAGRVPEIIANMQAHT-RPGGYNLIVAAMDTADY-PCH-------MP--------FSFTFKEDELRQYYA--DWE  163 (195)
T ss_pred             ccccCCHHHHHHHHHHHHHHh-CCCcEEEEEEecccCCC-CCC-------CC--------cCccCCHHHHHHHhC--CCe
Confidence            578888888999999999999 99999888876543221 100       00        112467888888886  588


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      +....
T Consensus       164 ~~~~~  168 (195)
T TIGR00477       164 LLKYN  168 (195)
T ss_pred             EEEee
Confidence            87765

Part of a tellurite-reducing operon tehA and tehB

>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase

Probab=97.13  E-value=0.0013  Score=43.46  Aligned_cols=78  Identities=13%  Similarity=0.143  Sum_probs=46.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhh----c--CCCceecCHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT----H--SPRGKVRTKHEFINLA   75 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~----~--~~~g~~rt~~e~~~ll   75 (99)
                      ++|...+  ...+|+++++.| +|||.+++.+.. .+. ..    ......+-.+..    .  .......+..++.+++
T Consensus       121 ~l~~~~~--~~~~l~~~~~~L-~~gG~l~i~~~~-~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  191 (224)
T TIGR01983       121 VLEHVPD--PQAFIRACAQLL-KPGGILFFSTIN-RTP-KS----YLLAIVGAEYILRIVPKGTHDWEKFIKPSELTSWL  191 (224)
T ss_pred             HHHhCCC--HHHHHHHHHHhc-CCCcEEEEEecC-CCc-hH----HHHHHHhhhhhhhcCCCCcCChhhcCCHHHHHHHH
Confidence            3555655  457999999999 999998886542 111 01    000111111110    0  0012345788999999


Q ss_pred             HHcCCCeeEEEEc
Q 037161           76 TAAGFSGIRFQCF   88 (99)
Q Consensus        76 ~~aGf~~~~~~~~   88 (99)
                      +++||+++++...
T Consensus       192 ~~~G~~i~~~~~~  204 (224)
T TIGR01983       192 ESAGLRVKDVKGL  204 (224)
T ss_pred             HHcCCeeeeeeeE
Confidence            9999999887643

This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.06  E-value=0.0021  Score=44.74  Aligned_cols=79  Identities=20%  Similarity=0.329  Sum_probs=58.7

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG   82 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~   82 (99)
                      +++...+.-...++++++.| +|||+++++....++.+...    ...+.+=  . .++||...|..+.....+++||.+
T Consensus       147 fEhvg~~~~~~ff~~~~~~L-~~~G~~llh~I~~~~~~~~~----~~~~i~~--y-iFPgG~lPs~~~i~~~~~~~~~~v  218 (283)
T COG2230         147 FEHVGKENYDDFFKKVYALL-KPGGRMLLHSITGPDQEFRR----FPDFIDK--Y-IFPGGELPSISEILELASEAGFVV  218 (283)
T ss_pred             HHHhCcccHHHHHHHHHhhc-CCCceEEEEEecCCCccccc----chHHHHH--h-CCCCCcCCCHHHHHHHHHhcCcEE
Confidence            34555566678999999999 99999999998777654311    1112221  1 246999999999999999999999


Q ss_pred             eEEEEcC
Q 037161           83 IRFQCFV   89 (99)
Q Consensus        83 ~~~~~~~   89 (99)
                      .....++
T Consensus       219 ~~~~~~~  225 (283)
T COG2230         219 LDVESLR  225 (283)
T ss_pred             ehHhhhc
Confidence            8877654

>KOG2361 consensus Predicted methyltransferase [General function prediction only]

Probab=96.99  E-value=0.002  Score=44.01  Aligned_cols=81  Identities=22%  Similarity=0.244  Sum_probs=56.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCce--ecCHHHHHHHHHHcC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGK--VRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~--~rt~~e~~~ll~~aG   79 (99)
                      ||-.-+.++-...++|+++.| +|||.|+.-|+-..+-..-.  ......++.+..+-.+|.+  -.+.++..+|++.||
T Consensus       153 vLSAi~pek~~~a~~nl~~ll-KPGG~llfrDYg~~DlaqlR--F~~~~~i~~nfYVRgDGT~~YfF~~eeL~~~f~~ag  229 (264)
T KOG2361|consen  153 VLSAIHPEKMQSVIKNLRTLL-KPGGSLLFRDYGRYDLAQLR--FKKGQCISENFYVRGDGTRAYFFTEEELDELFTKAG  229 (264)
T ss_pred             EEeccChHHHHHHHHHHHHHh-CCCcEEEEeecccchHHHHh--ccCCceeecceEEccCCceeeeccHHHHHHHHHhcc
Confidence            344556788899999999999 99999999998655431110  0112345555555443332  468999999999999


Q ss_pred             CCeeEE
Q 037161           80 FSGIRF   85 (99)
Q Consensus        80 f~~~~~   85 (99)
                      |..++.
T Consensus       230 f~~~~~  235 (264)
T KOG2361|consen  230 FEEVQL  235 (264)
T ss_pred             cchhcc
Confidence            998775

>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated

Probab=96.88  E-value=0.0047  Score=40.87  Aligned_cols=77  Identities=13%  Similarity=0.159  Sum_probs=47.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh--hh---cCCCceecCHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM--LT---HSPRGKVRTKHEFINLAT   76 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m--~~---~~~~g~~rt~~e~~~ll~   76 (99)
                      ++|+|++++...+++++.+.+ ++ +.++..   .+..  +. .    ..+....  +.   ........+..+|.++++
T Consensus       136 ~l~~~~~~~~~~~l~~l~~~~-~~-~~~i~~---~~~~--~~-~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  203 (230)
T PRK07580        136 VLIHYPQEDAARMLAHLASLT-RG-SLIFTF---APYT--PL-L----ALLHWIGGLFPGPSRTTRIYPHREKGIRRALA  203 (230)
T ss_pred             hhhcCCHHHHHHHHHHHHhhc-CC-eEEEEE---CCcc--HH-H----HHHHHhccccCCccCCCCccccCHHHHHHHHH
Confidence            578899999999999999866 43 333322   1211  10 0    1111100  00   011234568899999999


Q ss_pred             HcCCCeeEEEEcCC
Q 037161           77 AAGFSGIRFQCFVC   90 (99)
Q Consensus        77 ~aGf~~~~~~~~~~   90 (99)
                      ++||++.++.++..
T Consensus       204 ~~Gf~~~~~~~~~~  217 (230)
T PRK07580        204 AAGFKVVRTERISS  217 (230)
T ss_pred             HCCCceEeeeeccc
Confidence            99999999987653

>PLN02585 magnesium protoporphyrin IX methyltransferase

Probab=96.78  E-value=0.0044  Score=43.78  Aligned_cols=78  Identities=12%  Similarity=0.172  Sum_probs=44.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC---CCceecCHHHHHHHHHHc
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS---PRGKVRTKHEFINLATAA   78 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~---~~g~~rt~~e~~~ll~~a   78 (99)
                      ++|+++++....+++++.+ + .+ |+++|.  ..+...   ........-.  .+...   .....++.++++++|+++
T Consensus       221 vL~H~p~~~~~~ll~~l~~-l-~~-g~liIs--~~p~~~---~~~~l~~~g~--~~~g~~~~~r~y~~s~eel~~lL~~A  290 (315)
T PLN02585        221 VLIHYPQDKADGMIAHLAS-L-AE-KRLIIS--FAPKTL---YYDILKRIGE--LFPGPSKATRAYLHAEADVERALKKA  290 (315)
T ss_pred             EEEecCHHHHHHHHHHHHh-h-cC-CEEEEE--eCCcch---HHHHHHHHHh--hcCCCCcCceeeeCCHHHHHHHHHHC
Confidence            5778999888889988885 5 44 445442  222211   0100000001  11000   012234899999999999


Q ss_pred             CCCeeEEEEcC
Q 037161           79 GFSGIRFQCFV   89 (99)
Q Consensus        79 Gf~~~~~~~~~   89 (99)
                      ||++....-..
T Consensus       291 Gf~v~~~~~~~  301 (315)
T PLN02585        291 GWKVARREMTA  301 (315)
T ss_pred             CCEEEEEEEee
Confidence            99998766544

>KOG4300 consensus Predicted methyltransferase [General function prediction only]

Probab=96.71  E-value=0.01  Score=39.92  Aligned_cols=78  Identities=22%  Similarity=0.151  Sum_probs=51.4

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      -++.++.|+++.+.| +|||+++.+|.+..+-..-.  --.....|=.--..+ .|-..|.+ --+.|+.|.|+..+-.+
T Consensus       158 ve~~~k~L~e~~rlL-RpgG~iifiEHva~~y~~~n--~i~q~v~ep~~~~~~-dGC~ltrd-~~e~Leda~f~~~~~kr  232 (252)
T KOG4300|consen  158 VEDPVKQLNEVRRLL-RPGGRIIFIEHVAGEYGFWN--RILQQVAEPLWHLES-DGCVLTRD-TGELLEDAEFSIDSCKR  232 (252)
T ss_pred             cCCHHHHHHHHHHhc-CCCcEEEEEecccccchHHH--HHHHHHhchhhheec-cceEEehh-HHHHhhhcccccchhhc
Confidence            355899999999999 99999999999876542210  001111121111123 67777774 45678899999998877


Q ss_pred             cCC
Q 037161           88 FVC   90 (99)
Q Consensus        88 ~~~   90 (99)
                      ...
T Consensus       233 ~~~  235 (252)
T KOG4300|consen  233 FNF  235 (252)
T ss_pred             ccC
Confidence            653

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=96.70  E-value=0.023  Score=36.48  Aligned_cols=59  Identities=15%  Similarity=0.058  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcCC
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVC   90 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~   90 (99)
                      ..++|+++.+.| +|||++++++....                             ...++.++++++||+...+...+-
T Consensus       119 ~~~~l~~~~~~L-k~gG~~~~~~~~~~-----------------------------~~~~~~~~l~~~gf~~~~~~~~~~  168 (179)
T TIGR00537       119 IDRFLDELPEIL-KEGGRVQLIQSSLN-----------------------------GEPDTFDKLDERGFRYEIVAERGL  168 (179)
T ss_pred             HHHHHHhHHHhh-CCCCEEEEEEeccC-----------------------------ChHHHHHHHHhCCCeEEEEEEeec
Confidence            467899999999 99999999763211                             146788999999999999988877


Q ss_pred             CeeEEEEEC
Q 037161           91 NSWVMEFYK   99 (99)
Q Consensus        91 ~~~vie~~k   99 (99)
                      ++--++++|
T Consensus       169 ~~~~~~~~~  177 (179)
T TIGR00537       169 FFEELFAIK  177 (179)
T ss_pred             CceEEEEEE
Confidence            776666654

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK06202 hypothetical protein; Provisional

Probab=96.68  E-value=0.0072  Score=40.37  Aligned_cols=76  Identities=20%  Similarity=0.186  Sum_probs=48.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhh------hcCC----CceecCHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFML------THSP----RGKVRTKHEF   71 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~------~~~~----~g~~rt~~e~   71 (99)
                      +||+.+|++..++|+++++.+ +  |.++|.|...+..  .  +   .........      ...+    --+-+|.+|+
T Consensus       138 ~lhh~~d~~~~~~l~~~~r~~-~--~~~~i~dl~~~~~--~--~---~~~~~~~~~~~~~~~~~~d~~~s~~~~~~~~el  207 (232)
T PRK06202        138 FLHHLDDAEVVRLLADSAALA-R--RLVLHNDLIRSRL--A--Y---ALFWAGTRLLSRSSFVHTDGLLSVRRSYTPAEL  207 (232)
T ss_pred             eeecCChHHHHHHHHHHHHhc-C--eeEEEeccccCHH--H--H---HHHHHHHHHhccCceeeccchHHHHhhcCHHHH
Confidence            789999998899999999998 5  5566655443311  0  0   001111100      0010    1246789999


Q ss_pred             HHHHHHcCCCeeEEEEc
Q 037161           72 INLATAAGFSGIRFQCF   88 (99)
Q Consensus        72 ~~ll~~aGf~~~~~~~~   88 (99)
                      .+++++ ||++....++
T Consensus       208 ~~ll~~-Gf~~~~~~~~  223 (232)
T PRK06202        208 AALAPQ-GWRVERQWPF  223 (232)
T ss_pred             HHHhhC-CCeEEeccce
Confidence            999999 9999887766

>smart00138 MeTrc Methyltransferase, chemotaxis proteins

Probab=96.64  E-value=0.0023  Score=43.95  Aligned_cols=33  Identities=24%  Similarity=0.346  Sum_probs=30.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      ||||.+++++..+++++++++| +|||.+++-..
T Consensus       211 nvl~yf~~~~~~~~l~~l~~~L-~pGG~L~lg~~  243 (264)
T smart00138      211 NVLIYFDEPTQRKLLNRFAEAL-KPGGYLFLGHS  243 (264)
T ss_pred             hhHHhCCHHHHHHHHHHHHHHh-CCCeEEEEECc
Confidence            5899999999999999999999 99999998553

Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues.

>PRK06922 hypothetical protein; Provisional

Probab=96.62  E-value=0.0026  Score=48.94  Aligned_cols=32  Identities=28%  Similarity=0.495  Sum_probs=28.4

Q ss_pred             ChHHHHHHHHHHHHhccCCCceEEEEeeecCCC
Q 037161            7 SDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL   39 (99)
Q Consensus         7 ~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~   39 (99)
                      ++++..++|++++++| +|||+++|.|.+.++.
T Consensus       512 ~~edl~kiLreI~RVL-KPGGrLII~D~v~~E~  543 (677)
T PRK06922        512 NHEVIKKGLQSAYEVL-KPGGRIIIRDGIMTED  543 (677)
T ss_pred             cHHHHHHHHHHHHHHc-CCCcEEEEEeCccCCc
Confidence            4678999999999999 9999999999876654

>PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length

Probab=96.55  E-value=0.024  Score=39.88  Aligned_cols=84  Identities=19%  Similarity=0.152  Sum_probs=51.4

Q ss_pred             cCChHHHHH-HHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCc-----eecCHHHHHHHHHHc
Q 037161            5 AWSDEHCLK-LLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRG-----KVRTKHEFINLATAA   78 (99)
Q Consensus         5 dw~d~~~~~-iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g-----~~rt~~e~~~ll~~a   78 (99)
                      .++|.+.++ -|+.++.++ .|||.|+---....+.-         -+..-.+. ++.+|     +.||..|..+|+++|
T Consensus       221 lF~Dn~lv~~sl~gl~~al-~pgG~lIyTgQPwHPQl---------e~IAr~Lt-sHr~g~~WvMRrRsq~EmD~Lv~~a  289 (311)
T PF12147_consen  221 LFPDNDLVRRSLAGLARAL-EPGGYLIYTGQPWHPQL---------EMIARVLT-SHRDGKAWVMRRRSQAEMDQLVEAA  289 (311)
T ss_pred             hCCcHHHHHHHHHHHHHHh-CCCcEEEEcCCCCCcch---------HHHHHHHh-cccCCCceEEEecCHHHHHHHHHHc
Confidence            467867444 799999999 99997665322111110         01111111 11122     689999999999999


Q ss_pred             CCCeeEEEE-cCCCeeEEEEEC
Q 037161           79 GFSGIRFQC-FVCNSWVMEFYK   99 (99)
Q Consensus        79 Gf~~~~~~~-~~~~~~vie~~k   99 (99)
                      ||+.++..- -.+-++|--|+|
T Consensus       290 GF~K~~q~ID~~GIFTVSlA~r  311 (311)
T PF12147_consen  290 GFEKIDQRIDEWGIFTVSLARR  311 (311)
T ss_pred             CCchhhheeccCCceEEEeecC
Confidence            999766542 235566666554

It is found in association with PF00561 from PFAM. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. This domain belongs to the S-adenosyl-L-methionine-dependent methyltransferases superfamily.

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.47  E-value=0.016  Score=41.95  Aligned_cols=78  Identities=12%  Similarity=0.145  Sum_probs=53.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++++.+++.-..+++++++.| +|||++++.+...+......     ...++-  .. +++|...+.+++...++ .||.
T Consensus       237 ~~ehvg~~~~~~~l~~i~r~L-kpGG~lvl~~i~~~~~~~~~-----~~~i~~--yi-fp~g~lps~~~i~~~~~-~~~~  306 (383)
T PRK11705        237 MFEHVGPKNYRTYFEVVRRCL-KPDGLFLLHTIGSNKTDTNV-----DPWINK--YI-FPNGCLPSVRQIAQASE-GLFV  306 (383)
T ss_pred             chhhCChHHHHHHHHHHHHHc-CCCcEEEEEEccCCCCCCCC-----CCCcee--ee-cCCCcCCCHHHHHHHHH-CCcE
Confidence            356667777788999999999 99999999876544332111     011111  22 24788888999888866 5899


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      +..+..++
T Consensus       307 v~d~~~~~  314 (383)
T PRK11705        307 MEDWHNFG  314 (383)
T ss_pred             EEEEecCh
Confidence            88877654

>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase

Probab=96.37  E-value=0.016  Score=38.35  Aligned_cols=79  Identities=11%  Similarity=0.065  Sum_probs=46.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhh--cCCCceecCHHHHHHHHHHcC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT--HSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~--~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      ++|.+++++..++++++++.+ ++++ ++.  . .+..  .. .. ....+.-....  ....-..++.+++.++++++|
T Consensus       128 ~l~~~~~~~~~~~l~~i~~~~-~~~~-~i~--~-~~~~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  198 (219)
T TIGR02021       128 VLIHYPASDMAKALGHLASLT-KERV-IFT--F-APKT--AW-LA-FLKMIGELFPGSSRATSAYLHPMTDLERALGELG  198 (219)
T ss_pred             HHHhCCHHHHHHHHHHHHHHh-CCCE-EEE--E-CCCc--hH-HH-HHHHHHhhCcCcccccceEEecHHHHHHHHHHcC
Confidence            467788888889999999887 6542 222  2 1211  10 10 00011111000  001234679999999999999


Q ss_pred             CCeeEEEEcC
Q 037161           80 FSGIRFQCFV   89 (99)
Q Consensus        80 f~~~~~~~~~   89 (99)
                      |+++......
T Consensus       199 f~v~~~~~~~  208 (219)
T TIGR02021       199 WKIVREGLVS  208 (219)
T ss_pred             ceeeeeeccc
Confidence            9999887654

This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM.

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=96.29  E-value=0.027  Score=38.99  Aligned_cols=66  Identities=17%  Similarity=0.175  Sum_probs=46.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|..++++...+++++++.| +|||.+++++.+-.+....+        .        ......+.+|+.++++.  |+
T Consensus       193 vl~~l~~~~~~~~l~~~~~~L-kpgG~~l~v~~~~~~~~~~~--------~--------p~~~~~~~~el~~~~~~--~~  253 (287)
T PRK12335        193 VLMFLNRERIPAIIKNMQEHT-NPGGYNLIVCAMDTEDYPCP--------M--------PFSFTFKEGELKDYYQD--WE  253 (287)
T ss_pred             hhhhCCHHHHHHHHHHHHHhc-CCCcEEEEEEecccccCCCC--------C--------CCCcccCHHHHHHHhCC--CE
Confidence            578788888999999999999 99999888776543321100        0        01234668889888864  88


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      +++..
T Consensus       254 i~~~~  258 (287)
T PRK12335        254 IVKYN  258 (287)
T ss_pred             EEEEe
Confidence            88764

>PTZ00146 fibrillarin; Provisional

Probab=96.10  E-value=0.047  Score=38.31  Aligned_cols=75  Identities=12%  Similarity=-0.005  Sum_probs=44.0

Q ss_pred             ccccCChH-HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSDE-HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d~-~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |++|..+. +...++.+++..| +|||+++|.-..-.-+..+                   ...++=.+|. ++|+++||
T Consensus       206 V~~Dva~pdq~~il~~na~r~L-KpGG~~vI~ika~~id~g~-------------------~pe~~f~~ev-~~L~~~GF  264 (293)
T PTZ00146        206 IFADVAQPDQARIVALNAQYFL-KNGGHFIISIKANCIDSTA-------------------KPEVVFASEV-QKLKKEGL  264 (293)
T ss_pred             EEEeCCCcchHHHHHHHHHHhc-cCCCEEEEEEeccccccCC-------------------CHHHHHHHHH-HHHHHcCC
Confidence            45655433 4556667899999 9999999931111101001                   1111111344 88999999


Q ss_pred             CeeEEEEcCC---CeeEEEE
Q 037161           81 SGIRFQCFVC---NSWVMEF   97 (99)
Q Consensus        81 ~~~~~~~~~~---~~~vie~   97 (99)
                      +.++...+..   .++++.+
T Consensus       265 ~~~e~v~L~Py~~~h~~v~~  284 (293)
T PTZ00146        265 KPKEQLTLEPFERDHAVVIG  284 (293)
T ss_pred             ceEEEEecCCccCCcEEEEE
Confidence            9999887753   4455543

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=95.91  E-value=0.0032  Score=39.36  Aligned_cols=70  Identities=26%  Similarity=0.290  Sum_probs=42.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhh-hhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKAN-SQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~-~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      ++|+.++.  ..+|+++.+.| +++|++++.+....+.-......... ..-+..+.   ..+.  +.++|..+|++||
T Consensus        82 ~l~~~~~~--~~~l~~~~~~l-k~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~ag  152 (152)
T PF13847_consen   82 VLHHFPDP--EKVLKNIIRLL-KPGGILIISDPNHNDELPEQLEELMNLYSEVWSMI---YIGN--DKEEWKYILEEAG  152 (152)
T ss_dssp             TGGGTSHH--HHHHHHHHHHE-EEEEEEEEEEEEHSHHHHHHHHHHHHHHHHHHHHC---C-----CCCGHHHHHHHTT
T ss_pred             chhhccCH--HHHHHHHHHHc-CCCcEEEEEECChHHHHHHHHHHHHHHHHHHhhhh---hccc--CHHHHHHHHHhcC
Confidence            46777774  58899999999 99999999998732211010000000 11111111   1122  7889999999998

...

>PRK10611 chemotaxis methyltransferase CheR; Provisional

Probab=95.82  E-value=0.011  Score=41.21  Aligned_cols=32  Identities=16%  Similarity=0.276  Sum_probs=28.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      |||..++++.-.+++++++++| +|||.|++-.
T Consensus       231 NvliyF~~~~~~~vl~~l~~~L-~pgG~L~lG~  262 (287)
T PRK10611        231 NVMIYFDKTTQERILRRFVPLL-KPDGLLFAGH  262 (287)
T ss_pred             hHHhcCCHHHHHHHHHHHHHHh-CCCcEEEEeC
Confidence            5888999999999999999999 9999887743

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=95.77  E-value=0.13  Score=34.87  Aligned_cols=58  Identities=17%  Similarity=0.103  Sum_probs=41.8

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      .+....+++++.+.| +|||++++.+...+                             ..+++.+.+++.||++.++..
T Consensus       189 ~~~~~~l~~~~~~~L-kpgG~lilsgi~~~-----------------------------~~~~v~~~l~~~Gf~~~~~~~  238 (250)
T PRK00517        189 ANPLLELAPDLARLL-KPGGRLILSGILEE-----------------------------QADEVLEAYEEAGFTLDEVLE  238 (250)
T ss_pred             HHHHHHHHHHHHHhc-CCCcEEEEEECcHh-----------------------------hHHHHHHHHHHCCCEEEEEEE
Confidence            344567888999999 99999888543211                             245778899999999998877


Q ss_pred             cCCCeeEE
Q 037161           88 FVCNSWVM   95 (99)
Q Consensus        88 ~~~~~~vi   95 (99)
                      .+...+++
T Consensus       239 ~~~W~~~~  246 (250)
T PRK00517        239 RGEWVALV  246 (250)
T ss_pred             eCCEEEEE
Confidence            65555543

>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=95.75  E-value=0.062  Score=37.99  Aligned_cols=69  Identities=17%  Similarity=0.193  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchh--hhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSAT--SKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~--~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      -...|+.++++| +|||.+++--.+++.+......  .+++     . |-+  -=..-|..-...|++.+||+.+++..+
T Consensus       198 Pl~~L~~Lk~~L-~~gGeLvLETlvi~g~~~~~L~P~~rYa-----~-m~n--v~FiPs~~~L~~wl~r~gF~~v~~v~~  268 (315)
T PF08003_consen  198 PLDHLKQLKDSL-RPGGELVLETLVIDGDENTVLVPEDRYA-----K-MRN--VWFIPSVAALKNWLERAGFKDVRCVDV  268 (315)
T ss_pred             HHHHHHHHHHhh-CCCCEEEEEEeeecCCCceEEccCCccc-----C-CCc--eEEeCCHHHHHHHHHHcCCceEEEecC
Confidence            467899999999 9999887755566654321111  1111     1 111  123458999999999999999999865

The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification

>PLN03075 nicotianamine synthase; Provisional

Probab=95.67  E-value=0.012  Score=41.36  Aligned_cols=30  Identities=13%  Similarity=0.189  Sum_probs=27.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEE
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      +||+|+.++-.++|+++++.| +|||.+++-
T Consensus       203 ALi~~dk~~k~~vL~~l~~~L-kPGG~Lvlr  232 (296)
T PLN03075        203 ALVGMDKEEKVKVIEHLGKHM-APGALLMLR  232 (296)
T ss_pred             cccccccccHHHHHHHHHHhc-CCCcEEEEe
Confidence            689999889999999999999 999988874

>PF06859 Bin3: Bicoid-interacting protein 3 (Bin3); InterPro: IPR010675 This entry represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3)

Probab=95.55  E-value=0.0045  Score=37.34  Aligned_cols=75  Identities=20%  Similarity=0.297  Sum_probs=38.0

Q ss_pred             cCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH--cCCCe
Q 037161            5 AWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA--AGFSG   82 (99)
Q Consensus         5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~--aGf~~   82 (99)
                      +|.|+-..++++++++.| +|||.+++ |+-   + -.. +.+... ..-.+..+. ..-.-..+++.+.|.+  .||+.
T Consensus        17 n~GD~Gl~~~f~~~~~~L-~pGG~lil-EpQ---~-w~s-Y~~~~~-~~~~~~~n~-~~i~lrP~~F~~~L~~~evGF~~   87 (110)
T PF06859_consen   17 NWGDEGLKRFFRRIYSLL-RPGGILIL-EPQ---P-WKS-YKKAKR-LSEEIRENY-KSIKLRPDQFEDYLLEPEVGFSS   87 (110)
T ss_dssp             HHHHHHHHHHHHHHHHHE-EEEEEEEE-E-------HHH-HHTTTT-S-HHHHHHH-HH----GGGHHHHHTSTTT---E
T ss_pred             cCcCHHHHHHHHHHHHhh-CCCCEEEE-eCC---C-cHH-HHHHhh-hhHHHHhHH-hceEEChHHHHHHHHhcccceEE
Confidence            789999999999999999 99886655 532   1 000 000000 000111111 2233345578898887  59999


Q ss_pred             eEEEEc
Q 037161           83 IRFQCF   88 (99)
Q Consensus        83 ~~~~~~   88 (99)
                      .+....
T Consensus        88 ~e~~~~   93 (110)
T PF06859_consen   88 VEELGV   93 (110)
T ss_dssp             EEEE--
T ss_pred             EEEccc
Confidence            876554

Bin3, which shows similarity to a number of protein methyltransferases that modify RNA-binding proteins, interacts with Bicoid, which itself directs pattern formation in the early Drosophila embryo. The interaction might allow Bicoid to switch between its dual roles in transcription and translation []. Note that proteins of the entry contain a conserved HLN motif.; GO: 0008168 methyltransferase activity; PDB: 3G07_B.

>PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes

Probab=95.53  E-value=0.048  Score=37.70  Aligned_cols=70  Identities=23%  Similarity=0.306  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCC------CCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPEL------PENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR   84 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~------~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~   84 (99)
                      -..+|+.++++| +|+|++++. .++|=.      +.....+  ...++     ..+.+-|=..+.+.+.|+.+||++++
T Consensus       167 P~~LL~~i~~~l-~p~G~lilA-vVlP~~pyVE~~~g~~~~P--~e~l~-----~~g~~~E~~v~~l~~v~~p~GF~v~~  237 (265)
T PF05219_consen  167 PLTLLRDIRRAL-KPNGRLILA-VVLPFRPYVEFGGGKSNRP--SELLP-----VKGATFEEQVSSLVNVFEPAGFEVER  237 (265)
T ss_pred             HHHHHHHHHHHh-CCCCEEEEE-EEecccccEEcCCCCCCCc--hhhcC-----CCCCcHHHHHHHHHHHHHhcCCEEEE
Confidence            468999999999 999888774 344421      1000000  01112     12122233334455789999999999


Q ss_pred             EEEcC
Q 037161           85 FQCFV   89 (99)
Q Consensus        85 ~~~~~   89 (99)
                      ..+++
T Consensus       238 ~tr~P  242 (265)
T PF05219_consen  238 WTRLP  242 (265)
T ss_pred             EeccC
Confidence            98875

The function of this protein is unknown []. However, these proteins appear to be related to other methyltransferases.

>PRK05785 hypothetical protein; Provisional

Probab=95.40  E-value=0.14  Score=34.33  Aligned_cols=92  Identities=8%  Similarity=-0.060  Sum_probs=51.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCc-hhhh-hhhhhchHhhhcCCCce-----------ecCH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENS-ATSK-ANSQIDVFMLTHSPRGK-----------VRTK   68 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~-~~~~-~~~~~dl~m~~~~~~g~-----------~rt~   68 (99)
                      .||+++|  -.+.|++++++| +|  .+.|+|...|+..... .... ........-.....+..           -.+.
T Consensus       119 ~l~~~~d--~~~~l~e~~RvL-kp--~~~ile~~~p~~~~~~~~~~~y~~~~~P~~~~~~~~~~~~Y~yl~~si~~f~~~  193 (226)
T PRK05785        119 ALHASDN--IEKVIAEFTRVS-RK--QVGFIAMGKPDNVIKRKYLSFYLRYIMPYIACLAGAKCRDYKYIYYIYERLPTN  193 (226)
T ss_pred             hhhccCC--HHHHHHHHHHHh-cC--ceEEEEeCCCCcHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCH
Confidence            4788877  467999999999 88  4567776544321100 0000 00011111111111122           2377


Q ss_pred             HHHHHHHHHcCCCeeEEEEcC-CCeeEEEEEC
Q 037161           69 HEFINLATAAGFSGIRFQCFV-CNSWVMEFYK   99 (99)
Q Consensus        69 ~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~k   99 (99)
                      +++.++++++| ..++...+. +..++..+.|
T Consensus       194 ~~~~~~~~~~~-~~~~~~~~~~G~~~~~~~~k  224 (226)
T PRK05785        194 SFHREIFEKYA-DIKVYEERGLGLVYFVVGSS  224 (226)
T ss_pred             HHHHHHHHHHh-CceEEEEccccEEEEEEEee
Confidence            89999999984 667777764 5566776665

>TIGR02072 BioC biotin biosynthesis protein BioC

Probab=95.30  E-value=0.072  Score=35.04  Aligned_cols=69  Identities=14%  Similarity=0.082  Sum_probs=44.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|..+|  -.++|+++++.| +|||.+++.+...+..     .    .....  .... +....+..+|.+++..+ |+
T Consensus       107 ~l~~~~~--~~~~l~~~~~~L-~~~G~l~~~~~~~~~~-----~----~~~~~--~~~~-~~~~~~~~~~~~~l~~~-f~  170 (240)
T TIGR02072       107 ALQWCDD--LSQALSELARVL-KPGGLLAFSTFGPGTL-----H----ELRQS--FGQH-GLRYLSLDELKALLKNS-FE  170 (240)
T ss_pred             hhhhccC--HHHHHHHHHHHc-CCCcEEEEEeCCccCH-----H----HHHHH--HHHh-ccCCCCHHHHHHHHHHh-cC
Confidence            3444444  567999999999 9999999875432211     0    01111  0101 45667899999999998 88


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      .+.+.
T Consensus       171 ~~~~~  175 (240)
T TIGR02072       171 LLTLE  175 (240)
T ss_pred             CcEEE
Confidence            77654

This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=95.09  E-value=0.028  Score=32.83  Aligned_cols=24  Identities=17%  Similarity=0.375  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEe
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      ++..++|+++++.| +|||+++|.+
T Consensus        88 ~~~~~~l~~~~~~L-~pgG~lvi~~  111 (112)
T PF12847_consen   88 DERRRVLERIRRLL-KPGGRLVINT  111 (112)
T ss_dssp             HHHHHHHHHHHHHE-EEEEEEEEEE
T ss_pred             hHHHHHHHHHHHhc-CCCcEEEEEE
Confidence            68899999999999 9999999865

...

>COG4798 Predicted methyltransferase [General function prediction only]

Probab=94.97  E-value=0.11  Score=34.73  Aligned_cols=64  Identities=17%  Similarity=0.069  Sum_probs=45.2

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      ...+.++-+.++++| +|||.++|.|..........         |-.      .-.-++..-..+-.+.+||+..--..
T Consensus       142 ~~~A~~vna~vf~~L-KPGGv~~V~dH~a~pG~~~~---------dt~------~~~ri~~a~V~a~veaaGFkl~aeS~  205 (238)
T COG4798         142 PATAAKVNAAVFKAL-KPGGVYLVEDHRADPGSGLS---------DTI------TLHRIDPAVVIAEVEAAGFKLEAESE  205 (238)
T ss_pred             cchHHHHHHHHHHhc-CCCcEEEEEeccccCCCChh---------hhh------hhcccChHHHHHHHHhhcceeeeeeh
Confidence            556888999999999 99999999999877653221         110      11223455677888999999875543

>PRK14968 putative methyltransferase; Provisional

Probab=94.92  E-value=0.41  Score=30.39  Aligned_cols=59  Identities=17%  Similarity=0.251  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC-
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV-   89 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~-   89 (99)
                      ...+++++.+.| +|||.+++.-.   ..                          ...+++.++++++||++..+.... 
T Consensus       127 ~~~~i~~~~~~L-k~gG~~~~~~~---~~--------------------------~~~~~l~~~~~~~g~~~~~~~~~~~  176 (188)
T PRK14968        127 IDRFLDEVGRYL-KPGGRILLLQS---SL--------------------------TGEDEVLEYLEKLGFEAEVVAEEKF  176 (188)
T ss_pred             HHHHHHHHHHhc-CCCeEEEEEEc---cc--------------------------CCHHHHHHHHHHCCCeeeeeeeccc
Confidence            467899999999 99998887531   00                          012467889999999988775442 


Q ss_pred             --CCeeEEEEEC
Q 037161           90 --CNSWVMEFYK   99 (99)
Q Consensus        90 --~~~~vie~~k   99 (99)
                        ....+++++|
T Consensus       177 ~~~~~~~~~~~~  188 (188)
T PRK14968        177 PFEELIVLELVK  188 (188)
T ss_pred             CCceEEEEEEeC
Confidence              2234444443

>PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.69  E-value=0.023  Score=37.59  Aligned_cols=32  Identities=22%  Similarity=0.321  Sum_probs=27.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      |||-.++++...+++++++++| +|||-|++-.
T Consensus       144 NVlIYF~~~~~~~vl~~l~~~L-~pgG~L~lG~  175 (196)
T PF01739_consen  144 NVLIYFDPETQQRVLRRLHRSL-KPGGYLFLGH  175 (196)
T ss_dssp             SSGGGS-HHHHHHHHHHHGGGE-EEEEEEEE-T
T ss_pred             CEEEEeCHHHHHHHHHHHHHHc-CCCCEEEEec
Confidence            6888999999999999999999 9999998854

The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region []. CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the C-terminal SAM-binding domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF03705 from PFAM. ; PDB: 1AF7_A 1BC5_A.

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.47  E-value=0.18  Score=34.08  Aligned_cols=75  Identities=15%  Similarity=0.189  Sum_probs=41.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhh-----hhchHhhhcC-CCceecCHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS-----QIDVFMLTHS-PRGKVRTKHEFINLA   75 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~-----~~dl~m~~~~-~~g~~rt~~e~~~ll   75 (99)
                      ++|..+|  -.++|++++++| +|||++++.   .++....+.......     -+...+.... ..+..-+..++.+++
T Consensus       102 ~l~~~~d--~~~~l~~~~~~L-kpgG~~~~~---~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l  175 (258)
T PRK01683        102 SLQWLPD--HLELFPRLVSLL-APGGVLAVQ---MPDNLDEPSHVLMREVAENGPWEQNLPDRGARRAPLPPPHAYYDAL  175 (258)
T ss_pred             ChhhCCC--HHHHHHHHHHhc-CCCcEEEEE---CCCCCCCHHHHHHHHHHccCchHHHhccccccCcCCCCHHHHHHHH
Confidence            4555555  468999999999 999998884   232211110000000     0010110000 012345678999999


Q ss_pred             HHcCCCe
Q 037161           76 TAAGFSG   82 (99)
Q Consensus        76 ~~aGf~~   82 (99)
                      .++|+.+
T Consensus       176 ~~~g~~v  182 (258)
T PRK01683        176 APAACRV  182 (258)
T ss_pred             HhCCCce
Confidence            9999864

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.17  E-value=0.045  Score=37.38  Aligned_cols=78  Identities=17%  Similarity=0.141  Sum_probs=50.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchH---hhhc---CCCceecCHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVF---MLTH---SPRGKVRTKHEFINLA   75 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~---m~~~---~~~g~~rt~~e~~~ll   75 (99)
                      ||++.+|++.  ++++|.+-+ +|||.+++.....  .  .  .+.+...+...   -++.   .+-++-...+|...++
T Consensus       133 VlEHv~dp~~--~~~~c~~lv-kP~G~lf~STinr--t--~--ka~~~~i~~ae~vl~~vP~gTH~~~k~irp~El~~~~  203 (243)
T COG2227         133 VLEHVPDPES--FLRACAKLV-KPGGILFLSTINR--T--L--KAYLLAIIGAEYVLRIVPKGTHDYRKFIKPAELIRWL  203 (243)
T ss_pred             HHHccCCHHH--HHHHHHHHc-CCCcEEEEecccc--C--H--HHHHHHHHHHHHHHHhcCCcchhHHHhcCHHHHHHhc
Confidence            6788888665  999999999 9999888765431  1  1  11111111110   0111   1124566788999999


Q ss_pred             HHcCCCeeEEEEc
Q 037161           76 TAAGFSGIRFQCF   88 (99)
Q Consensus        76 ~~aGf~~~~~~~~   88 (99)
                      ..+||+......+
T Consensus       204 ~~~~~~~~~~~g~  216 (243)
T COG2227         204 LGANLKIIDRKGL  216 (243)
T ss_pred             ccCCceEEeecce
Confidence            9999999887654

>PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein

Probab=94.16  E-value=0.32  Score=32.79  Aligned_cols=59  Identities=17%  Similarity=0.292  Sum_probs=46.3

Q ss_pred             hHHHHHHHHHHHHhccCCCce-----EEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161            8 DEHCLKLLKNCYESINKEDGK-----LIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG   82 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~-----l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~   82 (99)
                      ..+--++|+++++-| +|+|.     |+|+   +|.+.                   ..|++--+.+.|.++++.-||..
T Consensus       120 p~~RG~Ml~r~~~fL-~~~g~~~~~~LFlV---lP~~C-------------------v~NSRy~~~~~l~~im~~LGf~~  176 (219)
T PF11968_consen  120 PKQRGEMLRRAHKFL-KPPGLSLFPSLFLV---LPLPC-------------------VTNSRYMTEERLREIMESLGFTR  176 (219)
T ss_pred             HHHHHHHHHHHHHHh-CCCCccCcceEEEE---eCchH-------------------hhcccccCHHHHHHHHHhCCcEE
Confidence            445678999999999 88888     6663   44321                   12788889999999999999999


Q ss_pred             eEEEEcC
Q 037161           83 IRFQCFV   89 (99)
Q Consensus        83 ~~~~~~~   89 (99)
                      ++.+...
T Consensus       177 ~~~~~~~  183 (219)
T PF11968_consen  177 VKYKKSK  183 (219)
T ss_pred             EEEEecC
Confidence            9987654

>PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases

Probab=94.01  E-value=0.17  Score=34.06  Aligned_cols=61  Identities=20%  Similarity=0.222  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcCC
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVC   90 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~   90 (99)
                      ....|+.+.+.| +|||.|.|.|..          +++    +             +.++|.+.++..||+...-.....
T Consensus       137 ~~~fi~EA~RvL-K~~G~L~IAEV~----------SRf----~-------------~~~~F~~~~~~~GF~~~~~d~~n~  188 (219)
T PF05148_consen  137 WPDFIREANRVL-KPGGILKIAEVK----------SRF----E-------------NVKQFIKALKKLGFKLKSKDESNK  188 (219)
T ss_dssp             HHHHHHHHHHHE-EEEEEEEEEEEG----------GG-----S--------------HHHHHHHHHCTTEEEEEEE--ST
T ss_pred             cHHHHHHHHhee-ccCcEEEEEEec----------ccC----c-------------CHHHHHHHHHHCCCeEEecccCCC
Confidence            456899999999 999999999842          111    1             467899999999999998655566


Q ss_pred             CeeEEEEEC
Q 037161           91 NSWVMEFYK   99 (99)
Q Consensus        91 ~~~vie~~k   99 (99)
                      .+.+++.+|
T Consensus       189 ~F~~f~F~K  197 (219)
T PF05148_consen  189 HFVLFEFKK  197 (219)
T ss_dssp             TEEEEEEEE
T ss_pred             eEEEEEEEE
Confidence            778887765

; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B.

>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family

Probab=93.82  E-value=0.11  Score=36.90  Aligned_cols=33  Identities=6%  Similarity=0.263  Sum_probs=28.8

Q ss_pred             ccccCChHHHHHHHHHHHH-hccCCCceEEE-Eeee
Q 037161            2 ILHAWSDEHCLKLLKNCYE-SINKEDGKLIV-VEAV   35 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~-al~~pgg~l~I-~e~~   35 (99)
                      .+.|++++++..+|+++++ .| .||+.++| +|..
T Consensus       166 siGNf~~~ea~~fL~~~~~~~l-~~~d~lLiG~D~~  200 (319)
T TIGR03439       166 SIGNFSRPEAAAFLAGFLATAL-SPSDSFLIGLDGC  200 (319)
T ss_pred             cccCCCHHHHHHHHHHHHHhhC-CCCCEEEEecCCC
Confidence            5789999999999999999 99 99988888 5554

This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=93.65  E-value=0.37  Score=31.03  Aligned_cols=47  Identities=13%  Similarity=0.211  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      ...+++.+++.| +|||++++.....                             -+.++..++++++||+.+++..
T Consensus       110 ~~~~l~~~~~~L-k~gG~lv~~~~~~-----------------------------~~~~~~~~~l~~~g~~~~~~~~  156 (187)
T PRK08287        110 LTAIIDWSLAHL-HPGGRLVLTFILL-----------------------------ENLHSALAHLEKCGVSELDCVQ  156 (187)
T ss_pred             HHHHHHHHHHhc-CCCeEEEEEEecH-----------------------------hhHHHHHHHHHHCCCCcceEEE
Confidence            456888899999 9999887743210                             0134667788899988777643

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=93.64  E-value=0.33  Score=32.65  Aligned_cols=64  Identities=9%  Similarity=0.112  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG   82 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~   82 (99)
                      ..++|+++++.| +|||.+++.......-+      .....+...-.... ...-.+.+++.+++...|++.
T Consensus       119 ~~~~l~~~~~~L-k~gG~l~~~~~~~~~~~------el~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~  182 (251)
T PRK10258        119 LSTALRELYRVV-RPGGVVAFTTLVQGSLP------ELHQAWQAVDERPH-ANRFLPPDAIEQALNGWRYQH  182 (251)
T ss_pred             HHHHHHHHHHHc-CCCeEEEEEeCCCCchH------HHHHHHHHhccCCc-cccCCCHHHHHHHHHhCCcee
Confidence            568999999999 99999998765322111      01111110000011 234568999999999999874

>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific

Probab=93.61  E-value=0.29  Score=32.68  Aligned_cols=46  Identities=17%  Similarity=0.164  Sum_probs=35.0

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      ..+++++.+.| +|||++++.-     .                         ....+++.++++++||+.+++.+-
T Consensus       197 ~~~i~~~~~~L-~~gG~~~~~~-----~-------------------------~~~~~~~~~~l~~~gf~~v~~~~d  242 (251)
T TIGR03534       197 RRIIAQAPRLL-KPGGWLLLEI-----G-------------------------YDQGEAVRALFEAAGFADVETRKD  242 (251)
T ss_pred             HHHHHHHHHhc-ccCCEEEEEE-----C-------------------------ccHHHHHHHHHHhCCCCceEEEeC
Confidence            47899999999 9999887621     0                         012457888999999999888764

Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3.

>PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins

Probab=93.43  E-value=0.083  Score=35.14  Aligned_cols=32  Identities=22%  Similarity=0.263  Sum_probs=27.8

Q ss_pred             ccccCCh-HHHHHHHHHHHHhccCCCceEEEEee
Q 037161            2 ILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         2 vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      |+|.++| ++....++++.++| .|||.+++...
T Consensus       115 VlYYL~~~~~L~~~l~~l~~~L-~pgG~LV~g~~  147 (201)
T PF05401_consen  115 VLYYLDDAEDLRAALDRLVAAL-APGGHLVFGHA  147 (201)
T ss_dssp             -GGGSSSHHHHHHHHHHHHHTE-EEEEEEEEEEE
T ss_pred             HhHcCCCHHHHHHHHHHHHHHh-CCCCEEEEEEe
Confidence            6888976 67899999999999 99999999775

The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A.

>KOG2899 consensus Predicted methyltransferase [General function prediction only]

Probab=92.97  E-value=0.14  Score=35.31  Aligned_cols=70  Identities=16%  Similarity=0.198  Sum_probs=45.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |=-+|.|+-.+++++++++-| .|||.+++ |+   .+...  +.+......-  +..++.-.....+.++.|+.+++.
T Consensus       179 IHLNwgD~GL~~ff~kis~ll-~pgGiLvv-EP---QpWks--Y~kaar~~e~--~~~ny~~i~lkp~~f~~~l~q~~v  248 (288)
T KOG2899|consen  179 IHLNWGDDGLRRFFRKISSLL-HPGGILVV-EP---QPWKS--YKKAARRSEK--LAANYFKIFLKPEDFEDWLNQIVV  248 (288)
T ss_pred             EecccccHHHHHHHHHHHHhh-CcCcEEEE-cC---CchHH--HHHHHHHHHH--hhcCccceecCHHHHHhhhhhhhh
Confidence            334899999999999999999 99987655 42   22211  2222222111  111234567788999999998853

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=92.95  E-value=0.17  Score=29.75  Aligned_cols=28  Identities=11%  Similarity=0.273  Sum_probs=22.0

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEE
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      .+.+.....++++++++.| +|||++++.
T Consensus        94 ~~~~~~~~~~~l~~~~~~L-k~gG~li~~  121 (124)
T TIGR02469        94 IGGSGGLLQEILEAIWRRL-RPGGRIVLN  121 (124)
T ss_pred             ECCcchhHHHHHHHHHHHc-CCCCEEEEE
Confidence            3444555679999999999 999998773

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=91.90  E-value=0.51  Score=31.47  Aligned_cols=65  Identities=8%  Similarity=-0.009  Sum_probs=43.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|..+.+.-.+.++++.++| +|||++++.-...++.....                  --...|.+|..++|+. +|.
T Consensus       122 ~~~~l~~~~R~~~~~~l~~lL-kpgG~~ll~~~~~~~~~~~g------------------pp~~~~~~eL~~~f~~-~~~  181 (213)
T TIGR03840       122 ALIALPEEMRQRYAAHLLALL-PPGARQLLITLDYDQSEMAG------------------PPFSVSPAEVEALYGG-HYE  181 (213)
T ss_pred             hhccCCHHHHHHHHHHHHHHc-CCCCeEEEEEEEcCCCCCCC------------------cCCCCCHHHHHHHhcC-Cce
Confidence            467888888899999999999 99998777655443221100                  0123667788888863 455


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      +..+.
T Consensus       182 i~~~~  186 (213)
T TIGR03840       182 IELLE  186 (213)
T ss_pred             EEEEe
Confidence            55544

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR00027 mthyl_TIGR00027 methyltransferase, putative, TIGR00027 family

Probab=91.77  E-value=1.4  Score=30.31  Aligned_cols=77  Identities=18%  Similarity=0.118  Sum_probs=46.9

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCch-hhhhh--hh--hchHhhhcCCCceecCHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSA-TSKAN--SQ--IDVFMLTHSPRGKVRTKHEFINLAT   76 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~-~~~~~--~~--~dl~m~~~~~~g~~rt~~e~~~ll~   76 (99)
                      |+...+.+++.++|+.+.+.. .||+.|+ +|.+.+-...... ..+..  ..  .+..-+  . .+  .+.++..++|+
T Consensus       167 vl~YL~~~~v~~ll~~i~~~~-~~gs~l~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~--~~~~~~~~~l~  239 (260)
T TIGR00027       167 LLMYLTEEAVDALLAFIAELS-APGSRLA-FDYVRPLDGEWRAGMRAPVYHAARGVDGSGL--V-FG--IDRADVAEWLA  239 (260)
T ss_pred             hhhcCCHHHHHHHHHHHHHhC-CCCcEEE-EEeccccchhHHHHHHHHHHHhhhccccccc--c-cC--CChhhHHHHHH
Confidence            567889999999999999877 7776555 6776552211100 00000  00  111111  1 22  34689999999


Q ss_pred             HcCCCeeEE
Q 037161           77 AAGFSGIRF   85 (99)
Q Consensus        77 ~aGf~~~~~   85 (99)
                      ..||+....
T Consensus       240 ~~Gw~~~~~  248 (260)
T TIGR00027       240 ERGWRASEH  248 (260)
T ss_pred             HCCCeeecC
Confidence            999998765

This model represents a set of probable methyltransferases, about 300 amino acids long, with essentially full length homology. Members share an N-terminal region described by Pfam model pfam02409. Included are a paralogous family of 12 proteins in Mycobacterium tuberculosis, plus close homologs in related species, a family of 8 in the archaeon Methanosarcina acetivorans, and small numbers of members in other species, including plants.

>COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]

Probab=91.01  E-value=0.35  Score=33.60  Aligned_cols=32  Identities=22%  Similarity=0.386  Sum_probs=28.6

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      |||-.++.+.-.+|+++.+++| +|||.|+|-.
T Consensus       210 NVLIYFd~~~q~~il~~f~~~L-~~gG~LflG~  241 (268)
T COG1352         210 NVLIYFDEETQERILRRFADSL-KPGGLLFLGH  241 (268)
T ss_pred             ceEEeeCHHHHHHHHHHHHHHh-CCCCEEEEcc
Confidence            6777889999999999999999 9999999854

>PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=91.00  E-value=0.33  Score=33.52  Aligned_cols=65  Identities=14%  Similarity=0.049  Sum_probs=43.2

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      -++-.+.|+|+...| +|||.+++.... ....    +.  .....+       ..-.-+.+..++-|+++||.+.+...
T Consensus       175 ~~~y~~al~ni~~lL-kpGG~Lil~~~l-~~t~----Y~--vG~~~F-------~~l~l~ee~v~~al~~aG~~i~~~~~  239 (256)
T PF01234_consen  175 LDEYRRALRNISSLL-KPGGHLILAGVL-GSTY----YM--VGGHKF-------PCLPLNEEFVREALEEAGFDIEDLEK  239 (256)
T ss_dssp             HHHHHHHHHHHHTTE-EEEEEEEEEEES-S-SE----EE--ETTEEE-------E---B-HHHHHHHHHHTTEEEEEEEG
T ss_pred             HHHHHHHHHHHHHHc-CCCcEEEEEEEc-Ccee----EE--ECCEec-------ccccCCHHHHHHHHHHcCCEEEeccc
Confidence            455688999999999 999999998763 3220    10  000011       12245688999999999999998875

The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A ....

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=90.82  E-value=0.68  Score=30.98  Aligned_cols=65  Identities=12%  Similarity=0.046  Sum_probs=43.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCC-CCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELP-ENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~-~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++|..+.+.-.+.++++.+.| +|||+++++-...++.. ..+                   -...|.+|+.++|.. +|
T Consensus       125 ~~~~l~~~~R~~~~~~l~~lL-~pgG~~~l~~~~~~~~~~~gP-------------------p~~~~~~el~~~~~~-~~  183 (218)
T PRK13255        125 ALIALPEEMRERYVQQLAALL-PAGCRGLLVTLDYPQEELAGP-------------------PFSVSDEEVEALYAG-CF  183 (218)
T ss_pred             hHhhCCHHHHHHHHHHHHHHc-CCCCeEEEEEEEeCCccCCCC-------------------CCCCCHHHHHHHhcC-Cc
Confidence            467888888999999999999 99998666544433221 111                   124668888888853 36


Q ss_pred             CeeEEEE
Q 037161           81 SGIRFQC   87 (99)
Q Consensus        81 ~~~~~~~   87 (99)
                      .+..+..
T Consensus       184 ~i~~~~~  190 (218)
T PRK13255        184 EIELLER  190 (218)
T ss_pred             eEEEeee
Confidence            6665554

>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional

Probab=90.48  E-value=0.51  Score=34.31  Aligned_cols=29  Identities=24%  Similarity=0.492  Sum_probs=25.2

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      |.++++.+.++++.+++.| +|||+++|+-
T Consensus       312 ~~~~~~ia~~l~~~a~~~L-kpGG~L~iV~  340 (378)
T PRK15001        312 HALTDNVAWEMFHHARRCL-KINGELYIVA  340 (378)
T ss_pred             ccCCHHHHHHHHHHHHHhc-ccCCEEEEEE
Confidence            4567788899999999999 9999999973

>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=90.39  E-value=2.9  Score=28.34  Aligned_cols=57  Identities=18%  Similarity=0.187  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE-cC
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC-FV   89 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~   89 (99)
                      ..++++++.+.| +|||.+++ +.    .  .                       ...+++.+++++.||..+++.. ..
T Consensus       217 ~~~~~~~~~~~L-k~gG~l~~-e~----g--~-----------------------~~~~~~~~~l~~~gf~~v~~~~d~~  265 (275)
T PRK09328        217 YRRIIEQAPRYL-KPGGWLLL-EI----G--Y-----------------------DQGEAVRALLAAAGFADVETRKDLA  265 (275)
T ss_pred             HHHHHHHHHHhc-ccCCEEEE-EE----C--c-----------------------hHHHHHHHHHHhCCCceeEEecCCC
Confidence            467899999999 99998887 21    0  0                       0123588899999999777753 33


Q ss_pred             CCeeEEEEE
Q 037161           90 CNSWVMEFY   98 (99)
Q Consensus        90 ~~~~vie~~   98 (99)
                      +..-++-+.
T Consensus       266 ~~~r~~~~~  274 (275)
T PRK09328        266 GRDRVVLGR  274 (275)
T ss_pred             CCceEEEEE
Confidence            333343343

>KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification]

Probab=89.86  E-value=2.1  Score=30.11  Aligned_cols=61  Identities=21%  Similarity=0.190  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcCC
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVC   90 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~   90 (99)
                      ....++.+++.| +|||.+.|.|.-   .          .+.|              ..+|.+-|...||......-...
T Consensus       243 ~~df~kEa~RiL-k~gG~l~IAEv~---S----------Rf~d--------------v~~f~r~l~~lGF~~~~~d~~n~  294 (325)
T KOG3045|consen  243 LADFIKEANRIL-KPGGLLYIAEVK---S----------RFSD--------------VKGFVRALTKLGFDVKHKDVSNK  294 (325)
T ss_pred             HHHHHHHHHHHh-ccCceEEEEehh---h----------hccc--------------HHHHHHHHHHcCCeeeehhhhcc
Confidence            456889999999 999999998742   1          1112              23478888888998887766666


Q ss_pred             CeeEEEEEC
Q 037161           91 NSWVMEFYK   99 (99)
Q Consensus        91 ~~~vie~~k   99 (99)
                      .+.++|+.|
T Consensus       295 ~F~lfefkK  303 (325)
T KOG3045|consen  295 YFTLFEFKK  303 (325)
T ss_pred             eEEEEEEec
Confidence            777777654

>COG4627 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.48  E-value=0.35  Score=31.31  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=26.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEE
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      ||+-++.-++-...|+.|++-| +|||.|-|.
T Consensus        55 HvlEHlt~~Eg~~alkechr~L-rp~G~LriA   85 (185)
T COG4627          55 HVLEHLTYDEGTSALKECHRFL-RPGGKLRIA   85 (185)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHh-CcCcEEEEE
Confidence            3556677788999999999999 999998874

>PF10017 Methyltransf_33: Histidine-specific methyltransferase, SAM-dependent; InterPro: IPR019257 This domain is found in methyltransferases and various hypothetical proteins

Probab=88.70  E-value=1.1  Score=27.38  Aligned_cols=33  Identities=18%  Similarity=0.006  Sum_probs=27.3

Q ss_pred             CceecCHHHHHHHHHHcCCCeeEEEEcCC-CeeE
Q 037161           62 RGKVRTKHEFINLATAAGFSGIRFQCFVC-NSWV   94 (99)
Q Consensus        62 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~-~~~v   94 (99)
                      .+.-+|.+++..++++|||++.+.+.-+. .+++
T Consensus        92 ~S~Ky~~~~~~~l~~~aGl~~~~~w~d~~~~f~l  125 (127)
T PF10017_consen   92 NSYKYSPEEFEALAEQAGLEVEKRWTDPKGDFSL  125 (127)
T ss_pred             EeeCcCHHHHHHHHHHCCCeeEEEEECCCCCeEE
Confidence            67889999999999999999999986543 3443

>PF07109 Mg-por_mtran_C: Magnesium-protoporphyrin IX methyltransferase C-terminus; InterPro: IPR010940 This entry represents the C terminus (approximately 100 residues) of bacterial and eukaryotic Magnesium-protoporphyrin IX methyltransferase (2

Probab=87.99  E-value=3.9  Score=24.17  Aligned_cols=87  Identities=18%  Similarity=0.178  Sum_probs=51.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC----CCceecCHHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS----PRGKVRTKHEFINLATA   77 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~----~~g~~rt~~e~~~ll~~   77 (99)
                      +|=+++.++..++|++...-   ..+++++-  +.|..  +.    +..+.-+.-+--.    +.-...+.++..+.+++
T Consensus         4 vLIHYp~~d~~~~l~~La~~---t~~~~ifT--fAP~T--~~----L~~m~~iG~lFP~~dRsp~i~~~~e~~l~~~l~~   72 (97)
T PF07109_consen    4 VLIHYPAEDAAQMLAHLASR---TRGSLIFT--FAPRT--PL----LALMHAIGKLFPRPDRSPRIYPHREEDLRRALAA   72 (97)
T ss_pred             eEeccCHHHHHHHHHHHHHh---ccCcEEEE--ECCCC--HH----HHHHHHHhccCCCCCCCCcEEEeCHHHHHHHHHh
Confidence            45578999999999998773   34555542  33432  11    1111111111100    11235568899999999


Q ss_pred             cCCCeeEEEEcCCC---eeEEEEEC
Q 037161           78 AGFSGIRFQCFVCN---SWVMEFYK   99 (99)
Q Consensus        78 aGf~~~~~~~~~~~---~~vie~~k   99 (99)
                      +||++.+...+..+   .-++|+++
T Consensus        73 ~g~~~~r~~ris~gFY~S~llE~~r   97 (97)
T PF07109_consen   73 AGWRIGRTERISSGFYISQLLEAVR   97 (97)
T ss_pred             CCCeeeecccccCcChHHHHhhccC
Confidence            99999999887643   24666653

1.1.11 from EC). This converts magnesium-protoporphyrin IX to magnesium-protoporphyrin IX metylester using S-adenosyl-L-methionine as a cofactor [].; GO: 0046406 magnesium protoporphyrin IX methyltransferase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process

>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes

Probab=87.97  E-value=1.5  Score=29.44  Aligned_cols=64  Identities=17%  Similarity=0.144  Sum_probs=41.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCC--CCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL--PENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~--~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      .|+..+.+.-.+-.+++++.| +|||+++++-...+..  ..||                    ..-+.+|++++|. .+
T Consensus       125 ~l~Alpp~~R~~Ya~~l~~ll-~p~g~~lLi~l~~~~~~~~GPP--------------------f~v~~~ev~~l~~-~~  182 (218)
T PF05724_consen  125 FLCALPPEMRERYAQQLASLL-KPGGRGLLITLEYPQGEMEGPP--------------------FSVTEEEVRELFG-PG  182 (218)
T ss_dssp             STTTS-GGGHHHHHHHHHHCE-EEEEEEEEEEEES-CSCSSSSS------------------------HHHHHHHHT-TT
T ss_pred             ccccCCHHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCcCCCCcC--------------------CCCCHHHHHHHhc-CC
Confidence            366778888889999999999 9999954443332222  1122                    1234689999998 88


Q ss_pred             CCeeEEEE
Q 037161           80 FSGIRFQC   87 (99)
Q Consensus        80 f~~~~~~~   87 (99)
                      |++..+..
T Consensus       183 f~i~~l~~  190 (218)
T PF05724_consen  183 FEIEELEE  190 (218)
T ss_dssp             EEEEEEEE
T ss_pred             cEEEEEec
Confidence            88877764

Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.

>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)

Probab=87.18  E-value=1.4  Score=24.03  Aligned_cols=24  Identities=21%  Similarity=0.357  Sum_probs=20.9

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEE
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      .+....+++++.+.+ +|||.+++.
T Consensus        80 ~~~~~~~l~~~~~~l-~~~g~~~~~  103 (107)
T cd02440          80 VEDLARFLEEARRLL-KPGGVLVLT  103 (107)
T ss_pred             hhHHHHHHHHHHHHc-CCCCEEEEE
Confidence            567889999999999 999998875

There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=87.06  E-value=2.2  Score=28.91  Aligned_cols=35  Identities=9%  Similarity=0.055  Sum_probs=30.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP   37 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~   37 (99)
                      .|+..+++.-.+..+++.+.| +|||+++++-.-.+
T Consensus       133 ~~~Alpp~~R~~Y~~~l~~lL-~pgg~llll~~~~~  167 (226)
T PRK13256        133 AYIALPNDLRTNYAKMMLEVC-SNNTQILLLVMEHD  167 (226)
T ss_pred             hHhcCCHHHHHHHHHHHHHHh-CCCcEEEEEEEecC
Confidence            477889999999999999999 99999999876433

>PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes

Probab=86.76  E-value=0.49  Score=33.75  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=46.1

Q ss_pred             ChHHHHHHHHHHHHhccCCCceEEEEee----ecC---C------CCC---C--------c-hhhhhhhhhchHhhhcCC
Q 037161            7 SDEHCLKLLKNCYESINKEDGKLIVVEA----VLP---E------LPE---N--------S-ATSKANSQIDVFMLTHSP   61 (99)
Q Consensus         7 ~d~~~~~iL~~~~~al~~pgg~l~I~e~----~~~---~------~~~---~--------~-~~~~~~~~~dl~m~~~~~   61 (99)
                      +.+.+..+|+|+...| +|||.++..=+    ++.   +      .+.   +        . ..+.+..-+++.+.-..+
T Consensus       161 se~~ar~~l~Nvs~~L-k~GG~FIgT~~d~~~i~~~l~~~~~~~~~~~~gN~~y~I~f~~~~~~~~fG~~Y~F~L~~~v~  239 (331)
T PF03291_consen  161 SEEKARQFLKNVSSLL-KPGGYFIGTTPDSDEIVKRLREKKSNSEKKKFGNSVYSIEFDSDDFFPPFGAKYDFYLEDAVD  239 (331)
T ss_dssp             SHHHHHHHHHHHHHTE-EEEEEEEEEEE-HHHHHCCHHC-EEECCCSCSETSSEEEEESCCSS--CTTEEEEEEETTCSS
T ss_pred             CHHHHHHHHHHHHHhc-CCCCEEEEEecCHHHHHHHHHhhcccccccccCCccEEEEecccCCCCCCCcEEEEEecCcCC
Confidence            6777888999999999 99998876422    110   1      000   0        0 001122223332211111


Q ss_pred             Cceec--CHHHHHHHHHHcCCCeeEEEEc
Q 037161           62 RGKVR--TKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        62 ~g~~r--t~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      +-.|+  ..+-+.+++++.||+.+....+
T Consensus       240 ~~~EYlV~~~~~~~la~eyGLeLV~~~~F  268 (331)
T PF03291_consen  240 DCPEYLVPFDFFVKLAKEYGLELVEKKNF  268 (331)
T ss_dssp             CEEEE---HHHHHHHHHHTTEEEEEEEEH
T ss_pred             CCceEEeeHHHHHHHHHHcCCEEEEeCCh
Confidence            33333  4678899999999999876554

The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A.

>PF11899 DUF3419: Protein of unknown function (DUF3419); InterPro: IPR021829 This family of proteins are functionally uncharacterised

Probab=86.37  E-value=1.1  Score=32.68  Aligned_cols=32  Identities=13%  Similarity=0.305  Sum_probs=27.6

Q ss_pred             cC-ChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161            5 AW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLP   37 (99)
Q Consensus         5 dw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~   37 (99)
                      || ++++..++.+.+.+++ +|||||+.=-...+
T Consensus       306 Dwm~~~~~~~~~~~l~~~~-~pgaRV~~Rsa~~~  338 (380)
T PF11899_consen  306 DWMDPEQLNEEWQELARTA-RPGARVLWRSAAVP  338 (380)
T ss_pred             hhCCHHHHHHHHHHHHHHh-CCCCEEEEeeCCCC
Confidence            56 8888999999999999 99999998766544

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 398 to 802 amino acids in length.

>PRK14967 putative methyltransferase; Provisional

Probab=86.17  E-value=7.1  Score=25.86  Aligned_cols=24  Identities=17%  Similarity=0.235  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeee
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      ...+++++.+.| +|||+++++..-
T Consensus       138 ~~~~l~~a~~~L-k~gG~l~~~~~~  161 (223)
T PRK14967        138 LDRLCDAAPALL-APGGSLLLVQSE  161 (223)
T ss_pred             HHHHHHHHHHhc-CCCcEEEEEEec
Confidence            456889999999 999999986543

>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional

Probab=84.88  E-value=1.7  Score=31.15  Aligned_cols=27  Identities=19%  Similarity=0.348  Sum_probs=23.1

Q ss_pred             ChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161            7 SDEHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         7 ~d~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      +.+...++++++++.| +|||+++|+-.
T Consensus       278 ~~~~~~~~i~~a~~~L-kpgG~L~iVan  304 (342)
T PRK09489        278 SLDAAQTLIRGAVRHL-NSGGELRIVAN  304 (342)
T ss_pred             cHHHHHHHHHHHHHhc-CcCCEEEEEEe
Confidence            4566889999999999 99999998654

>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase

Probab=84.71  E-value=2.3  Score=28.07  Aligned_cols=35  Identities=11%  Similarity=0.226  Sum_probs=27.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPE   38 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~   38 (99)
                      ++||++++++..+.++++++.+   ++.++|.|...+.
T Consensus       113 ~vL~hl~p~~~~~~l~el~r~~---~~~v~i~e~~~~~  147 (204)
T TIGR03587       113 GVLIHINPDNLPTAYRELYRCS---NRYILIAEYYNPS  147 (204)
T ss_pred             ChhhhCCHHHHHHHHHHHHhhc---CcEEEEEEeeCCC
Confidence            3688888888999999999987   4678888876543

Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme

>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=84.40  E-value=4.2  Score=28.65  Aligned_cols=81  Identities=14%  Similarity=0.032  Sum_probs=47.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-CCC---chhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-PEN---SATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA   77 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-~~~---~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~   77 (99)
                      +|-..+.++..++|+++.... +||++++.... .++. ...   ..........++...-....  .....|++.++.+
T Consensus       179 Ll~YL~~~~v~~ll~~I~~~~-~~gS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~~~e~~~~l~~  254 (297)
T COG3315         179 LLMYLPEEAVDRLLSRIAALS-APGSRVAFDYS-LPGSLRDRLRRPAARKTMRGEDLDRGELVYF--GDDPAEIETWLAE  254 (297)
T ss_pred             ccccCCHHHHHHHHHHHHHhC-CCCceEEEecc-ccHHHHhcccchhhhhhccccccccccceec--cCCHHHHHHHHHh
Confidence            567789999999999999998 88777665433 2211 100   10000001111111111112  2346799999999


Q ss_pred             cCCCeeEEE
Q 037161           78 AGFSGIRFQ   86 (99)
Q Consensus        78 aGf~~~~~~   86 (99)
                      .||......
T Consensus       255 ~g~~~~~~~  263 (297)
T COG3315         255 RGWRSTLNR  263 (297)
T ss_pred             cCEEEEecC
Confidence            999988763

>TIGR02081 metW methionine biosynthesis protein MetW

Probab=83.61  E-value=2.1  Score=27.73  Aligned_cols=27  Identities=15%  Similarity=0.121  Sum_probs=23.3

Q ss_pred             CceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           62 RGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        62 ~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      +.+..|.+++.++++++||+++.....
T Consensus       142 ~~~~~s~~~~~~ll~~~Gf~v~~~~~~  168 (194)
T TIGR02081       142 NIHFCTIADFEDLCGELNLRILDRAAF  168 (194)
T ss_pred             CcccCcHHHHHHHHHHCCCEEEEEEEe
Confidence            346789999999999999999988765

This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized.

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=83.46  E-value=1.3  Score=29.36  Aligned_cols=33  Identities=15%  Similarity=0.207  Sum_probs=27.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      |+|..+.+...+|++++.+++ +|||..+|...+
T Consensus       103 v~~fL~~~~~~~i~~~m~~~~-~pGG~~li~~~~  135 (192)
T PF03848_consen  103 VFMFLQRELRPQIIENMKAAT-KPGGYNLIVTFM  135 (192)
T ss_dssp             SGGGS-GGGHHHHHHHHHHTE-EEEEEEEEEEEB
T ss_pred             EeccCCHHHHHHHHHHHHhhc-CCcEEEEEEEec
Confidence            567788888899999999999 999988886654

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=82.80  E-value=1.8  Score=28.22  Aligned_cols=24  Identities=21%  Similarity=0.569  Sum_probs=19.4

Q ss_pred             ChHHHHHHHHHHHHhccCCCceEEE
Q 037161            7 SDEHCLKLLKNCYESINKEDGKLIV   31 (99)
Q Consensus         7 ~d~~~~~iL~~~~~al~~pgg~l~I   31 (99)
                      +.+....+|+.+.+.| +|||++++
T Consensus       120 ~~~~~~~~l~~~~~~L-kpgG~lv~  143 (198)
T PRK00377        120 GSEKLKEIISASWEII-KKGGRIVI  143 (198)
T ss_pred             CcccHHHHHHHHHHHc-CCCcEEEE
Confidence            3445678899999999 99999875

>KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification]

Probab=82.68  E-value=1.7  Score=31.35  Aligned_cols=23  Identities=26%  Similarity=0.417  Sum_probs=19.8

Q ss_pred             ChHHHHHHHHHHHHhccCCCceEE
Q 037161            7 SDEHCLKLLKNCYESINKEDGKLI   30 (99)
Q Consensus         7 ~d~~~~~iL~~~~~al~~pgg~l~   30 (99)
                      +.+++..+|+|+++.| +|||..+
T Consensus       212 tee~ar~~l~Nva~~L-kpGG~FI  234 (389)
T KOG1975|consen  212 TEESARIALRNVAKCL-KPGGVFI  234 (389)
T ss_pred             cHHHHHHHHHHHHhhc-CCCcEEE
Confidence            6678999999999999 9998544

>TIGR00438 rrmJ cell division protein FtsJ

Probab=82.45  E-value=2.1  Score=27.55  Aligned_cols=21  Identities=24%  Similarity=0.268  Sum_probs=18.6

Q ss_pred             HHHHHHHHHHhccCCCceEEEE
Q 037161           11 CLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      ..++|+++++.| +|||++++.
T Consensus       125 ~~~~l~~~~~~L-kpgG~lvi~  145 (188)
T TIGR00438       125 VELALDIAKEVL-KPKGNFVVK  145 (188)
T ss_pred             HHHHHHHHHHHc-cCCCEEEEE
Confidence            368899999999 999999885

>KOG2918 consensus Carboxymethyl transferase [Posttranslational modification, protein turnover, chaperones]

Probab=81.74  E-value=4.7  Score=28.91  Aligned_cols=82  Identities=11%  Similarity=0.013  Sum_probs=52.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      +|-....+++..+++-+.+..  +++..+++|.+.+.++-+...-.-....+..+-.   =-..-|.+..++=|.++||+
T Consensus       197 vLvYM~pe~S~~Li~w~~~~F--~~a~fv~YEQi~~~D~Fg~vM~~nlk~r~~~L~g---le~y~s~Esq~~Rf~~~Gw~  271 (335)
T KOG2918|consen  197 VLVYMEPEESANLIKWAASKF--ENAHFVNYEQINPNDRFGKVMLANLKRRGCPLHG---LETYNSIESQRSRFLKAGWE  271 (335)
T ss_pred             hheeccHHHHHHHHHHHHHhC--CcccEEEEeccCCCChHHHHHHHHHHhcCCCCch---hhhcccHHHHHHHHHhcCCc
Confidence            456678899999999999987  7788999999986654221000000011111100   01245677888889999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      -+.+...
T Consensus       272 ~v~a~Dm  278 (335)
T KOG2918|consen  272 YVIAVDM  278 (335)
T ss_pred             eeehhhH
Confidence            9887654

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=81.12  E-value=2.8  Score=27.78  Aligned_cols=22  Identities=18%  Similarity=0.288  Sum_probs=19.3

Q ss_pred             HHHHHHHHHhccCCCceEEEEee
Q 037161           12 LKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      ..+|+.+++.| +|||.+++...
T Consensus       145 ~~~L~~~~~~L-kpGG~~vi~~~  166 (209)
T PRK11188        145 ELALDMCRDVL-APGGSFVVKVF  166 (209)
T ss_pred             HHHHHHHHHHc-CCCCEEEEEEe
Confidence            57899999999 99999999654

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=80.68  E-value=1.8  Score=28.43  Aligned_cols=22  Identities=14%  Similarity=0.169  Sum_probs=19.2

Q ss_pred             HHHHHHHHHHhccCCCceEEEEe
Q 037161           11 CLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      ...+|+++++.| +|||.++|..
T Consensus       135 ~~~~l~~i~~~L-kpgG~l~i~~  156 (202)
T PRK00121        135 QPEFLALYARKL-KPGGEIHFAT  156 (202)
T ss_pred             CHHHHHHHHHHc-CCCCEEEEEc
Confidence            467899999999 9999999854

>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT)

Probab=80.18  E-value=17  Score=25.42  Aligned_cols=63  Identities=13%  Similarity=0.140  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHhccCCCceEEE-EeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE
Q 037161            9 EHCLKLLKNCYESINKEDGKLIV-VEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I-~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      +....-|+.|+..| +||| +.| +-+.+-...            +..  .....+-+-|.+|..++.+..||++++-..
T Consensus       179 ~Ni~~Yi~tI~~lL-kpgG-~WIN~GPLlyh~~------------~~~--~~~~~sveLs~eEi~~l~~~~GF~~~~~~~  242 (270)
T PF07942_consen  179 ENIIEYIETIEHLL-KPGG-YWINFGPLLYHFE------------PMS--IPNEMSVELSLEEIKELIEKLGFEIEKEES  242 (270)
T ss_pred             HHHHHHHHHHHHHh-ccCC-EEEecCCccccCC------------CCC--CCCCcccCCCHHHHHHHHHHCCCEEEEEEE
Confidence            34678899999999 9999 333 222222111            110  011245789999999999999999987655

This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	99
1kyw_A	365	Crystal Structure Analysis Of Caffeic Acid5-Hydroxy		1e-25
3reo_A	368	Monolignol O-Methyltransferase (Momt) Length = 368		1e-21
3p9c_A	364	Crystal Structure Of Perennial Ryegrass Lpomt1 Boun		4e-21
1fp1_D	372	Crystal Structure Analysis Of Chalcone O-Methyltran		1e-14
1fpq_A	372	Crystal Structure Analysis Of Selenomethionine Subs		6e-13
1zg3_A	358	Crystal Structure Of The Isoflavanone 4'-O-Methyltr		2e-09
1zga_A	357	Crystal Structure Of Isoflavanone 4'-o-methyltransf		2e-09
1zgj_A	354	Crystal Structure Of Isoflavanone 4'-O-Methyltransf		2e-09
2qyo_A	357	Crystal Structure Of Isoflavone O-Methyltransferase		5e-07
1fp2_A	352	Crystal Structure Analysis Of Isoflavone O-Methyltr		4e-06
3lst_A	348	Crystal Structure Of Calo1, Methyltransferase In Ca		4e-05
1fpx_A	352	Crystal Structure Analysis Of Selenomethionine Subs		5e-05
1qzz_A	374	Crystal Structure Of Aclacinomycin-10-Hydroxylase (		1e-04
1xds_A	374	Crystal Structure Of Aclacinomycin-10-Hydroxylase (		6e-04

>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic Acid 35-O-Methyltransferase In Complex With 5- Hydroxyconiferaldehyde Length = 365

Iteration: 1
 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLK LKNCYE++  ++GK+IV E +LP  P++S  +K    IDV ML H+P
Sbjct: 267 ICHDWSDEHCLKFLKNCYEAL-PDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNP 325
Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF +LA  AGF G +  C   N+++MEF K
Sbjct: 326 GGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363

>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt) Length = 368

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLKLLKNCY ++  + GK+IV E +LP  P+ S  +K     D  ML ++P
Sbjct: 270 ICHDWSDEHCLKLLKNCYAAL-PDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNP 328
Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA A+GF G +      N++VMEF K
Sbjct: 329 GGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366

>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To Sah Length = 364

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH WSD+HC  LLKNCY+++    GK+++V+ +LP  PE + +S+    +D+ ML H+P
Sbjct: 268 ILHDWSDQHCATLLKNCYDALPAH-GKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNP 326
Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            G+ R + EF  LA  AGF+G++      N+W +EF K
Sbjct: 327 GGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364

>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase Length = 372

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
           ++ H WSDE C++ L NC+++++  +GK+I+VE +LPE P  S  SK  S +D  M   +
Sbjct: 275 AVCHNWSDEKCIEFLSNCHKALSP-NGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-T 332
Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSW-VMEFYK 99
             G+ RT+ ++  L+  +GFS  +  C   NS  VMEFYK
Sbjct: 333 VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372

>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted Chalcone O- Methyltransferase Length = 372

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
           ++ H WSDE C++ L NC+++++  +GK+I+VE +LPE P  S  SK  S +D      +
Sbjct: 275 AVCHNWSDEKCIEFLSNCHKALSP-NGKVIIVEFILPEEPNTSEESKLVSTLDNLXFI-T 332
Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSW-VMEFYK 99
             G+ RT+ ++  L+  +GFS  +  C   NS  V EFYK
Sbjct: 333 VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVXEFYK 372

>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone 4'-O-Methyltransferase Complexed With Sah And 2,7,4'-Trihydroxyisoflavanone Length = 358

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 2   ILHAWSDEHCLKLLKNCYESINK--EDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH 59
           +LH W+DE  LK+LKN  E+I+   +DGK+I+++  + E  ++   ++     D+ MLT 
Sbjct: 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTM 319
Query: 60  SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
              GK RTK E+  L   AGFS  +         ++E Y
Sbjct: 320 F-LGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 357

>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase Complexed With (+)-6a-hydroxymaackiain Length = 357

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 2   ILHAWSDEHCLKLLKNCYESINK--EDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH 59
           +LH W+DE  LK+LKN  E+I+   +DGK+I+++  + E  ++   ++     D+ MLT 
Sbjct: 259 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTM 318
Query: 60  SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
              GK RTK E+  L   AGFS  +         ++E Y
Sbjct: 319 F-LGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 356

>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase Complexed With (+)-Pisatin Length = 354

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 2   ILHAWSDEHCLKLLKNCYESINK--EDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH 59
           +LH W+DE  LK+LKN  E+I+   +DGK+I+++  + E  ++   ++     D+ MLT 
Sbjct: 256 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTM 315
Query: 60  SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
              GK RTK E+  L   AGFS  +         ++E Y
Sbjct: 316 F-LGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 353

>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase Homolog In Complex With Biochanin A And Sah Length = 357

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1   SILHAWSDEHCLKLLKNCYESINKED--GKLIVVEAVLPELPENSATSKANSQIDVFMLT 58
           ++LH W+D+ C+K+LK C E++  +   GK+IV++ V+ E  + +  ++    ++V +  
Sbjct: 259 AVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQIKLLMNVTI-- 316
Query: 59  HSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
               GK R + E+  L   AGF   +   F     ++E Y
Sbjct: 317 SCVNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIY 356

>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone O-Methyltransferase Length = 352

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKED--GKLIVVEAVLPELPENSATSKANSQIDVFMLTH 59
           ILH W+D+ CL++LK C E++  +   GK+ +++ V+ +  + +  ++    +DV M   
Sbjct: 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACL 314
Query: 60  SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
           +  GK R + E+  L   AGF   +         ++E Y
Sbjct: 315 N--GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351

>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In Calicheamicin Biosynthesis, Sah Bound Form Length = 348

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH W DE  +++L NC   +    G+++V++AV+PE  +   + + +     F    + 
Sbjct: 256 ILHNWGDEDSVRILTNC-RRVXPAHGRVLVIDAVVPEGNDAHQSKEXD-----FXXLAAR 309
Query: 62  RGKVRTKHEFINLATAAGF 80
            G+ RT  E   L TAAG 
Sbjct: 310 TGQERTAAELEPLFTAAGL 328

>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted Isoflavone O-Methyltransferase Length = 352

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKED--GKLIVVEAVLPELPENSATSKANSQIDVFMLTH 59
           ILH W+D+ CL++LK C E++  +   GK+ +++ V+ +  + +  ++     DV     
Sbjct: 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDENQVTQIKLLXDVNXACL 314
Query: 60  SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
           +  GK R + E+  L   AGF   +         ++E Y
Sbjct: 315 N--GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351

>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb) In Complex With S-Adensyl-L-Methionine (Sam) Length = 374

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           +L  WSDE  L +L+ C  ++ +  G+L+V++    ++  + A    ++ +D+ MLT   
Sbjct: 257 VLLNWSDEDALTILRGCVRAL-EPGGRLLVLDRA--DVEGDGADRFFSTLLDLRMLTFMG 313
Query: 62  RGKVRTKHEFINLATAAGFS 81
            G+VRT+ E ++LA +AG +
Sbjct: 314 -GRVRTRDEVVDLAGSAGLA 332

>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb) In Complex With S-Adenosyl-L-Methionine (Sam) And 11-Deoxy- Beta-Rhodomycin (Dbra) Length = 374

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           +L  WSDE  L +L+ C  ++ +  G+L+V++    ++  + A    ++ +D+  LT   
Sbjct: 257 VLLNWSDEDALTILRGCVRAL-EPGGRLLVLDRA--DVEGDGADRFFSTLLDLRXLTFXG 313
Query: 62  RGKVRTKHEFINLATAAGFS 81
            G+VRT+ E ++LA +AG +
Sbjct: 314 -GRVRTRDEVVDLAGSAGLA 332

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	99
3p9c_A	364	Caffeic acid O-methyltransferase; S-adenosylmethio	2e-38
3reo_A	368	(ISO)eugenol O-methyltransferase; directed evoluti	3e-38
1fp1_D	372	Isoliquiritigenin 2'-O-methyltransferase; protein-	7e-35
1fp2_A	352	Isoflavone O-methyltransferase; protein-product co	2e-33
1zg3_A	358	Isoflavanone 4'-O-methyltransferase; rossman fold,	8e-33
1qzz_A	374	RDMB, aclacinomycin-10-hydroxylase; anthracycline,	2e-31
3gwz_A	369	MMCR; methyltransferase, mitomycin, S-adenosyl met	5e-31
3lst_A	348	CALO1 methyltransferase; calicheamicin, enediyne,	2e-30
2ip2_A	334	Probable phenazine-specific methyltransferase; pyo	7e-30
3i53_A	332	O-methyltransferase; CO-complex, rossmann-like fol	3e-28
2r3s_A	335	Uncharacterized protein; methyltransferase domain,	6e-27
1tw3_A	360	COMT, carminomycin 4-O-methyltransferase; anthracy	2e-26
1x19_A	359	CRTF-related protein; methyltransferase, bacterioc	1e-25
3mcz_A	352	O-methyltransferase; adomet_mtases, S-adenosylmeth	1e-24
3dp7_A	363	SAM-dependent methyltransferase; structural genomi	2e-21

>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* Length = 364

 Score =  130 bits (328), Expect = 2e-38
 Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 1/99 (1%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
            ILH WSD+HC  LLKNCY+++    GK+++V+ +LP  PE + +S+    +D+ ML H+
Sbjct: 267 WILHDWSDQHCATLLKNCYDAL-PAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHN 325

Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
           P G+ R + EF  LA  AGF+G++      N+W +EF K
Sbjct: 326 PGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364

>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 1kyz_A* 1kyw_A* Length = 368

 Score =  129 bits (327), Expect = 3e-38
 Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 1/98 (1%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I H WSDEHCLKLLKNCY ++  + GK+IV E +LP  P+ S  +K     D  ML ++P
Sbjct: 270 ICHDWSDEHCLKLLKNCYAAL-PDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNP 328

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            GK RT+ EF  LA A+GF G +      N++VMEF K
Sbjct: 329 GGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366

>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* Length = 372

 Score =  121 bits (305), Expect = 7e-35
 Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
           ++ H WSDE C++ L NC++++   +GK+I+VE +LPE P  S  SK  S +D  M   +
Sbjct: 275 AVCHNWSDEKCIEFLSNCHKAL-SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-T 332

Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNS-WVMEFYK 99
             G+ RT+ ++  L+  +GFS  +  C   NS  VMEFYK
Sbjct: 333 VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372

>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* Length = 352

 Score =  117 bits (294), Expect = 2e-33
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 1   SILHAWSDEHCLKLLKNCYESI--NKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT 58
            ILH W+D+ CL++LK C E++  + + GK+ +++ V+ +  + +  ++    +DV M  
Sbjct: 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC 313

Query: 59  HSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
            +  GK R + E+  L   AGF   +         ++E Y
Sbjct: 314 LN--GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351

>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* Length = 358

 Score =  115 bits (290), Expect = 8e-33
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 2   ILHAWSDEHCLKLLKNCYESI--NKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH 59
           +LH W+DE  LK+LKN  E+I    +DGK+I+++  + E  ++   ++     D+ MLT 
Sbjct: 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTM 319

Query: 60  SPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
              GK RTK E+  L   AGFS  +         ++E Y
Sbjct: 320 F-LGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 357

>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Length = 374

 Score =  112 bits (281), Expect = 2e-31
 Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 9/103 (8%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           +L  WSDE  L +L+ C  ++ +  G+L+V++    E   + A    ++ +D+ MLT   
Sbjct: 257 VLLNWSDEDALTILRGCVRAL-EPGGRLLVLDRADVE--GDGADRFFSTLLDLRMLTF-M 312

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQ-----CFVCNSWVMEFYK 99
            G+VRT+ E ++LA +AG +    +         +  ++EF  
Sbjct: 313 GGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355

>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Length = 369

 Score =  111 bits (279), Expect = 5e-31
 Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
            +LH W D+  +++L+    ++ K D +L+V++ ++ E P  S        +D+ +L   
Sbjct: 276 HVLHDWDDDDVVRILRRIATAM-KPDSRLLVIDNLIDERPAASTLF-----VDLLLLVL- 328

Query: 61  PRGKVRTKHEFINLATAAGFSGIR-FQCFVCNSWVMEFYK 99
             G  R++ EF  L   +G    R   C      ++E  +
Sbjct: 329 VGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368

>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} Length = 348

 Score =  108 bits (273), Expect = 2e-30
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           ILH W DE  +++L NC   +    G+++V++AV+PE  +   +     ++D  ML    
Sbjct: 256 ILHNWGDEDSVRILTNCRRVM-PAHGRVLVIDAVVPEGNDAHQS----KEMDFMMLAA-R 309

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
            G+ RT  E   L TAAG    R         +    
Sbjct: 310 TGQERTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGV 346

>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Length = 334

 Score =  107 bits (269), Expect = 7e-30
 Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           I+    +   L+LL NC E++   DG+++V+E  +     +  +       DV +   + 
Sbjct: 242 IIGDLDEAASLRLLGNCREAM-AGDGRVVVIERTISASEPSPMS----VLWDVHLFM-AC 295

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99
            G+ RT  E ++L    GF+  R       + ++   +
Sbjct: 296 AGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333

>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* Length = 332

 Score =  103 bits (258), Expect = 3e-28
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
           ++LH W D   + +L+ C E+     G ++V+EAV  +         A + +D+ MLT+ 
Sbjct: 243 AVLHDWDDLSAVAILRRCAEAA-GSGGVVLVIEAVAGD-------EHAGTGMDLRMLTYF 294

Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEF 97
             GK R+  E   LA  AG +       +    ++E 
Sbjct: 295 -GGKERSLAELGELAAQAGLAVRAAHP-ISYVSIVEM 329

>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Length = 335

 Score = 99.7 bits (249), Expect = 6e-27
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 5/99 (5%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
            LH +    C +LL+    ++   +GK+IV + +          + A     + ML  +P
Sbjct: 241 FLHHFDVATCEQLLRKIKTAL-AVEGKVIVFDFIPNSDRITPPDAAA---FSLVMLATTP 296

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFV-CNSWVMEFYK 99
            G   T  E+ ++ + AGFS  +          V+  YK
Sbjct: 297 NGDAYTFAEYESMFSNAGFSHSQLHSLPTTQQQVIVAYK 335

>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* Length = 360

 Score = 98.9 bits (247), Expect = 2e-26
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
            +L  W D   +++L  C E++ +  G++++ E         +        +D+ ML   
Sbjct: 257 FVLLNWPDHDAVRILTRCAEAL-EPGGRILIHERDDLHENSFNEQFTE---LDLRMLVF- 311

Query: 61  PRGKVRTKHEFINLATAAGFSGIR 84
             G +RT+ ++  LA +AG     
Sbjct: 312 LGGALRTREKWDGLAASAGLVVEE 335

>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* Length = 359

 Score = 96.3 bits (240), Expect = 1e-25
 Identities = 9/97 (9%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           IL++ +++    + K  ++++ +  G+L++++ V+ +    +    ++  +   M     
Sbjct: 265 ILYSANEQLSTIMCKKAFDAM-RSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVL 323

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
               + +  +  +  + G+  +       +  V    
Sbjct: 324 GF--KEQARYKEILESLGYKDVTMVRKYDHLLVQAVK 358

>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Length = 352

 Score = 93.6 bits (233), Expect = 1e-24
 Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
             LH +      +++ +    + K  G L+++   + +     A S       + M+ ++
Sbjct: 256 DCLHYFDAREAREVIGHAAGLV-KPGGALLILTMTMNDDRVTPALSAD---FSLHMMVNT 311

Query: 61  PRGKVRTKHEFINLATAAGFSGIR 84
             G++        +   AG +   
Sbjct: 312 NHGELHPTPWIAGVVRDAGLAVGE 335

>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Length = 363

 Score = 85.5 bits (212), Expect = 2e-21
 Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPE-LPENSATSKANSQIDVFMLTHS 60
            L  +S+E  + +L    +SI  +D K+ ++E +      E ++       +    +  +
Sbjct: 257 FLDCFSEEEVISILTRVAQSI-GKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMA-N 314

Query: 61  PRGKVRTKHEFINLATAAGFSGIR 84
              K+    + I     AG     
Sbjct: 315 GNSKMFHSDDLIRCIENAGLEVEE 338

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	99
4a6d_A	353	Hydroxyindole O-methyltransferase; melatonin, circ	99.96
3p9c_A	364	Caffeic acid O-methyltransferase; S-adenosylmethio	99.9
3reo_A	368	(ISO)eugenol O-methyltransferase; directed evoluti	99.89
3lst_A	348	CALO1 methyltransferase; calicheamicin, enediyne,	99.84
3gwz_A	369	MMCR; methyltransferase, mitomycin, S-adenosyl met	99.83
1zg3_A	358	Isoflavanone 4'-O-methyltransferase; rossman fold,	99.83
3i53_A	332	O-methyltransferase; CO-complex, rossmann-like fol	99.83
2ip2_A	334	Probable phenazine-specific methyltransferase; pyo	99.82
1fp2_A	352	Isoflavone O-methyltransferase; protein-product co	99.81
1fp1_D	372	Isoliquiritigenin 2'-O-methyltransferase; protein-	99.8
3mcz_A	352	O-methyltransferase; adomet_mtases, S-adenosylmeth	99.76
3dp7_A	363	SAM-dependent methyltransferase; structural genomi	99.76
1tw3_A	360	COMT, carminomycin 4-O-methyltransferase; anthracy	99.72
2r3s_A	335	Uncharacterized protein; methyltransferase domain,	99.71
1qzz_A	374	RDMB, aclacinomycin-10-hydroxylase; anthracycline,	99.7
1x19_A	359	CRTF-related protein; methyltransferase, bacterioc	99.68
3dtn_A	234	Putative methyltransferase MM_2633; structural gen	99.05
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	98.98
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	98.83
3bxo_A	239	N,N-dimethyltransferase; desosamine, sugar, carboh	98.8
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	98.75
3pfg_A	263	N-methyltransferase; N,N-dimethyltransferase, SAM	98.73
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	98.69
1xtp_A	254	LMAJ004091AAA; SGPP, structural genomics, PSI, pro	98.69
2ex4_A	241	Adrenal gland protein AD-003; methyltransferase, s	98.68
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	98.63
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	98.63
1xxl_A	239	YCGJ protein; structural genomics, protein structu	98.61
1ve3_A	227	Hypothetical protein PH0226; dimer, riken structur	98.61
2qe6_A	274	Uncharacterized protein TFU_2867; putative methylt	98.6
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	98.6
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	98.59
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	98.59
3ocj_A	305	Putative exported protein; structural genomics, PS	98.59
3g2m_A	299	PCZA361.24; SAM-dependent methyltransferase, glyco	98.58
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	98.54
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	98.52
3lcc_A	235	Putative methyl chloride transferase; halide methy	98.52
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	98.5
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	98.49
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	98.48
3i9f_A	170	Putative type 11 methyltransferase; structural gen	98.47
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	98.45
3d2l_A	243	SAM-dependent methyltransferase; ZP_00538691.1, st	98.44
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	98.4
4fsd_A	383	Arsenic methyltransferase; rossmann fold; 1.75A {C	98.38
2zfu_A	215	Nucleomethylin, cerebral protein 1; nucleolar prot	98.38
1y8c_A	246	S-adenosylmethionine-dependent methyltransferase;	98.36
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	98.36
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	98.34
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	98.34
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	98.31
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	98.29
2p7i_A	250	Hypothetical protein; putative methyltransferase,	98.26
2aot_A	292	HMT, histamine N-methyltransferase; classic methyl	98.22
1vlm_A	219	SAM-dependent methyltransferase; possible histamin	98.21
3bkx_A	275	SAM-dependent methyltransferase; YP_807781.1, cycl	98.17
2ld4_A	176	Anamorsin; methyltransferase-like fold, alpha/beta	98.16
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	98.15
3f4k_A	257	Putative methyltransferase; structural genomics, P	98.15
4htf_A	285	S-adenosylmethionine-dependent methyltransferase;	98.08
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	98.06
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	98.03
3ggd_A	245	SAM-dependent methyltransferase; YP_325210.1, stru	98.03
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	98.03
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	98.02
2xvm_A	199	Tellurite resistance protein TEHB; antibiotic resi	98.0
3cc8_A	230	Putative methyltransferase; structural genomics, j	97.98
3ege_A	261	Putative methyltransferase from antibiotic biosyn	97.93
3giw_A	277	Protein of unknown function DUF574; rossmann-fold	97.92
3gu3_A	284	Methyltransferase; alpha-beta protein, structural	97.9
2p8j_A	209	S-adenosylmethionine-dependent methyltransferase;	97.9
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	97.84
3jwh_A	217	HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena	97.83
3jwg_A	219	HEN1, methyltransferase type 12; 1.90A {Clostridiu	97.82
1ri5_A	298	MRNA capping enzyme; methyltransferase, M7G, messe	97.81
2a14_A	263	Indolethylamine N-methyltransferase; SGC,INMT, str	97.8
2i62_A	265	Nicotinamide N-methyltransferase; structural genom	97.8
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	97.76
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	97.76
3thr_A	293	Glycine N-methyltransferase; GNMT, folate, methylt	97.72
2g72_A	289	Phenylethanolamine N-methyltransferase; HET: SAM F	97.67
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	97.67
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	97.53
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.51
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	97.49
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	97.38
1wzn_A	252	SAM-dependent methyltransferase; structural genomi	97.17
2vdw_A	302	Vaccinia virus capping enzyme D1 subunit; nucleoti	96.95
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.93
3m70_A	286	Tellurite resistance protein TEHB homolog; structu	96.9
2gs9_A	211	Hypothetical protein TT1324; methyl transferase, s	96.84
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.82
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.75
2b3t_A	276	Protein methyltransferase HEMK; translation termin	96.56
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	96.52
3p2e_A	225	16S rRNA methylase; methyltransferase, transferase	96.45
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.29
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	96.29
3mq2_A	218	16S rRNA methyltransferase; methyltranferase, ribo	96.13
3opn_A	232	Putative hemolysin; structural genomics, PSI-2, pr	96.06
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.95
3iei_A	334	Leucine carboxyl methyltransferase 1; LCMT-1, S-ad	95.94
3bgv_A	313	MRNA CAP guanine-N7 methyltransferase; alternative	95.86
1rjd_A	334	PPM1P, carboxy methyl transferase for protein phos	95.72
1af7_A	274	Chemotaxis receptor methyltransferase CHER; chemot	95.68
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.55
3ofk_A	216	Nodulation protein S; NODS, N-methyltransferase, S	95.49
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.45
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.16
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.12
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.11
3hp7_A	291	Hemolysin, putative; structural genomics, APC64019	95.03
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	94.93
3lpm_A	259	Putative methyltransferase; structural genomics, p	94.84
4dzr_A	215	Protein-(glutamine-N5) methyltransferase, release	94.74
2uyo_A	310	Hypothetical protein ML2640; putative methyltransf	94.73
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.44
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.4
2h00_A	254	Methyltransferase 10 domain containing protein; st	94.24
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	93.91
3htx_A	950	HEN1; HEN1, small RNA methyltransferase, protein-R	93.46
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	93.06
3q87_B	170	N6 adenine specific DNA methylase; SAM-methyltrans	92.99
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	92.78
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	92.71
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	92.58
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	92.3
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	92.29
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	92.15
3b5i_A	374	S-adenosyl-L-methionine:salicylic acid carboxyl me	91.95
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	91.82
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	91.39
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	91.03
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	90.8
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	90.63
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	90.19
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	90.07
2efj_A	384	3,7-dimethylxanthine methyltransferase; SAM-depend	89.99
2pjd_A	343	Ribosomal RNA small subunit methyltransferase C; g	89.92
1m6e_X	359	S-adenosyl-L-methionnine:salicylic acid carboxyl m	89.53
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	88.66
2b25_A	336	Hypothetical protein; structural genomics, methyl	87.71
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	87.35
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	87.11
1o9g_A	250	RRNA methyltransferase; antibiotic resistance, Se-	86.99
2qy6_A	257	UPF0209 protein YFCK; structural genomics, unknown	86.79
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	86.41
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	86.13
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	86.12
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	85.4
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	85.37
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	85.35
2frn_A	278	Hypothetical protein PH0793; structural genomics,	85.34
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	85.1
1ssz_A	34	Pulmonary surfactant-associated protein B; LUNG su	85.01
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	84.93
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	84.81
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	84.8
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	84.66
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	84.01
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	83.8
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	83.79
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	83.76
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	83.66
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	82.91
3sso_A	419	Methyltransferase; macrolide, natural product, ros	82.91
2plw_A	201	Ribosomal RNA methyltransferase, putative; malaria	81.55
3bzb_A	281	Uncharacterized protein; RED ALGA, protein structu	80.68

>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*

Probab=99.96  E-value=2.1e-28  Score=171.11  Aligned_cols=94  Identities=27%  Similarity=0.438  Sum_probs=86.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||||+|++|++||++|+++| +|||+|+|+|.++++++..+.   ....+|+.||+.+ +|++||.+||++||++|||
T Consensus       252 ~vlh~~~d~~~~~iL~~~~~al-~pgg~lli~e~~~~~~~~~~~---~~~~~dl~ml~~~-~g~ert~~e~~~ll~~AGf  326 (353)
T 4a6d_A          252 RVLHDWADGKCSHLLERIYHTC-KPGGGILVIESLLDEDRRGPL---LTQLYSLNMLVQT-EGQERTPTHYHMLLSSAGF  326 (353)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHC-CTTCEEEEEECCCCTTSCCCH---HHHHHHHHHHHSS-SCCCCCHHHHHHHHHHHTC
T ss_pred             eecccCCHHHHHHHHHHHHhhC-CCCCEEEEEEeeeCCCCCCCH---HHHHHHHHHHHhC-CCcCCCHHHHHHHHHHCCC
Confidence            6899999999999999999999 999999999999987765442   4467899999987 9999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      ++++++++++..++|+|+|
T Consensus       327 ~~v~v~~~~~~~~~i~ArK  345 (353)
T 4a6d_A          327 RDFQFKKTGAIYDAILARK  345 (353)
T ss_dssp             EEEEEECCSSSCEEEEEEC
T ss_pred             ceEEEEEcCCceEEEEEEe
Confidence            9999999999999999998

>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*

Probab=99.90  E-value=2.1e-23  Score=146.35  Aligned_cols=98  Identities=43%  Similarity=0.873  Sum_probs=85.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||+|+|+++.++|++++++| +|||+|+|+|.+.++.............+|+.|+....+|++||.+||.++|++|||
T Consensus       267 ~vlh~~~d~~~~~~L~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF  345 (364)
T 3p9c_A          267 WILHDWSDQHCATLLKNCYDAL-PAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGF  345 (364)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHS-CTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTC
T ss_pred             HHhccCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 999999999999987654432333446789999854349999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      +.+++.++.+..++||++|
T Consensus       346 ~~v~~~~~~~~~~vie~~k  364 (364)
T 3p9c_A          346 TGVKSTYIYANAWAIEFTK  364 (364)
T ss_dssp             CEEEEEEEETTEEEEEEEC
T ss_pred             ceEEEEEcCCceEEEEEeC
Confidence            9999999999999999997

>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*

Probab=99.89  E-value=1.5e-22  Score=142.04  Aligned_cols=98  Identities=49%  Similarity=0.847  Sum_probs=86.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||+|+|+++.++|++++++| +|||+|+|+|.+.++....+........+|+.|+..+.+|++||.+||+++|++|||
T Consensus       269 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF  347 (368)
T 3reo_A          269 WICHDWSDEHCLKLLKNCYAAL-PDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF  347 (368)
T ss_dssp             SCGGGBCHHHHHHHHHHHHHHS-CTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTC
T ss_pred             chhhcCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 999999999999887654433333456789999875448999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      +++++.+..+..++||++|
T Consensus       348 ~~v~~~~~~~~~~vie~~k  366 (368)
T 3reo_A          348 RGFKVASCAFNTYVMEFLK  366 (368)
T ss_dssp             CEEEEEEEETTEEEEEEEC
T ss_pred             eeeEEEEeCCCcEEEEEEe
Confidence            9999999999999999987

>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}

Probab=99.84  E-value=1.6e-20  Score=130.65  Aligned_cols=93  Identities=30%  Similarity=0.466  Sum_probs=83.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++||+|+|+++.++|++++++| +|||+++|.|.+.++...+.    ....+|+.|+... +|++||.+||.++|++|||
T Consensus       255 ~vlh~~~d~~~~~~L~~~~~~L-kpgG~l~i~e~~~~~~~~~~----~~~~~d~~~~~~~-~~~~~t~~e~~~ll~~aGf  328 (348)
T 3lst_A          255 RILHNWGDEDSVRILTNCRRVM-PAHGRVLVIDAVVPEGNDAH----QSKEMDFMMLAAR-TGQERTAAELEPLFTAAGL  328 (348)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHTC-CTTCEEEEEECCBCSSSSCC----HHHHHHHHHHHTT-SCCCCBHHHHHHHHHHTTE
T ss_pred             hhccCCCHHHHHHHHHHHHHhc-CCCCEEEEEEeccCCCCCcc----hhhhcChhhhhcC-CCcCCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 99999999999888764332    3457899998875 9999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      +++++.+..+..++||++|
T Consensus       329 ~~~~~~~~~~~~~vie~~p  347 (348)
T 3lst_A          329 RLDRVVGTSSVMSIAVGVP  347 (348)
T ss_dssp             EEEEEEECSSSCEEEEEEE
T ss_pred             ceEEEEECCCCcEEEEEEe
Confidence            9999999878899999986

>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*

Probab=99.83  E-value=1e-20  Score=132.63  Aligned_cols=92  Identities=24%  Similarity=0.452  Sum_probs=82.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||+|+|+++.++|++++++| +|||+++|.|.+.++...+.     ...+|+.|+... +|++||.+||.++|++|||
T Consensus       276 ~vlh~~~d~~~~~~L~~~~~~L-~pgG~l~i~e~~~~~~~~~~-----~~~~d~~~~~~~-~g~~~t~~e~~~ll~~aGf  348 (369)
T 3gwz_A          276 HVLHDWDDDDVVRILRRIATAM-KPDSRLLVIDNLIDERPAAS-----TLFVDLLLLVLV-GGAERSESEFAALLEKSGL  348 (369)
T ss_dssp             SCGGGSCHHHHHHHHHHHHTTC-CTTCEEEEEEEBCCSSCCHH-----HHHHHHHHHHHH-SCCCBCHHHHHHHHHTTTE
T ss_pred             hhhccCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCCc-----hhHhhHHHHhhc-CCccCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 99999999999988764321     457899998875 9999999999999999999


Q ss_pred             CeeEEEE-cCCCeeEEEEEC
Q 037161           81 SGIRFQC-FVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~-~~~~~~vie~~k   99 (99)
                      +++++.+ ..+..++||++|
T Consensus       349 ~~~~~~~~~~~~~svie~~~  368 (369)
T 3gwz_A          349 RVERSLPCGAGPVRIVEIRR  368 (369)
T ss_dssp             EEEEEEECSSSSEEEEEEEE
T ss_pred             eEEEEEECCCCCcEEEEEEe
Confidence            9999999 678899999986

>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*

Probab=99.83  E-value=2.2e-20  Score=130.28  Aligned_cols=97  Identities=35%  Similarity=0.554  Sum_probs=84.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCC---CceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKE---DGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA   77 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~p---gg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~   77 (99)
                      ++||+|+|+++.++|++++++| +|   ||+++|.|.+.++....+........+|+.|+... +|++||.+||.++|++
T Consensus       259 ~vlh~~~d~~~~~~l~~~~~~L-~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-~g~~~t~~e~~~ll~~  336 (358)
T 1zg3_A          259 WVLHDWNDEQSLKILKNSKEAI-SHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMF-LGKERTKQEWEKLIYD  336 (358)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHT-GGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHH-SCCCEEHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccC-CCCCCCHHHHHHHHHH
Confidence            5899999999999999999999 99   99999999998876443211124567899888765 8999999999999999


Q ss_pred             cCCCeeEEEEcCCCeeEEEEEC
Q 037161           78 AGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        78 aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      |||+++++.+.++..++||++|
T Consensus       337 aGf~~~~~~~~~~~~~vie~~~  358 (358)
T 1zg3_A          337 AGFSSYKITPISGFKSLIEVYP  358 (358)
T ss_dssp             TTCCEEEEEEETTTEEEEEEEC
T ss_pred             cCCCeeEEEecCCCcEEEEEeC
Confidence            9999999999888899999987

>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*

Probab=99.83  E-value=1.9e-20  Score=129.27  Aligned_cols=89  Identities=28%  Similarity=0.424  Sum_probs=79.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||+|+|+++.++|++++++| +|||+++|.|.+.++. .+      ...+|+.|+... +|++||.+||.++|++|||
T Consensus       243 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~-~~------~~~~d~~~~~~~-~~~~~t~~e~~~ll~~aGf  313 (332)
T 3i53_A          243 AVLHDWDDLSAVAILRRCAEAA-GSGGVVLVIEAVAGDE-HA------GTGMDLRMLTYF-GGKERSLAELGELAAQAGL  313 (332)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHH-TTTCEEEEEECCCC----C------CHHHHHHHHHHH-SCCCCCHHHHHHHHHHTTE
T ss_pred             hhhccCCHHHHHHHHHHHHHhc-CCCCEEEEEeecCCCC-Cc------cHHHHHHHHhhC-CCCCCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 9999999999988765 22      246888888875 9999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      +++++.+.++ .++||++|
T Consensus       314 ~~~~~~~~~~-~~vie~r~  331 (332)
T 3i53_A          314 AVRAAHPISY-VSIVEMTA  331 (332)
T ss_dssp             EEEEEEECSS-SEEEEEEE
T ss_pred             EEEEEEECCC-cEEEEEee
Confidence            9999999988 99999985

>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}

Probab=99.82  E-value=5.8e-20  Score=126.70  Aligned_cols=93  Identities=23%  Similarity=0.399  Sum_probs=82.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+|+|+++.++|++++++| +|||+++|.|.+.++...+    .....+|+.|+... +|++||.+||.+++++|||
T Consensus       241 ~vl~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~aGf  314 (334)
T 2ip2_A          241 RIIGDLDEAASLRLLGNCREAM-AGDGRVVVIERTISASEPS----PMSVLWDVHLFMAC-AGRHRTTEEVVDLLGRGGF  314 (334)
T ss_dssp             SCGGGCCHHHHHHHHHHHHHHS-CTTCEEEEEECCBCSSSCC----HHHHHHHHHHHHHH-SCCCCBHHHHHHHHHHTTE
T ss_pred             hhccCCCHHHHHHHHHHHHHhc-CCCCEEEEEEeccCCCCCc----chhHHhhhHhHhhC-CCcCCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 9999999999988765432    23467888888765 8999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      +++++.+.++..++||++|
T Consensus       315 ~~~~~~~~~~~~~~i~~~~  333 (334)
T 2ip2_A          315 AVERIVDLPMETRMIVAAR  333 (334)
T ss_dssp             EEEEEEEETTTEEEEEEEE
T ss_pred             ceeEEEECCCCCEEEEEEe
Confidence            9999999988899999986

>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*

Probab=99.81  E-value=2e-19  Score=125.13  Aligned_cols=96  Identities=28%  Similarity=0.556  Sum_probs=82.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCC---CceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKE---DGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA   77 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~p---gg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~   77 (99)
                      ++||+|+|+++.++|++++++| +|   ||+++|.|.+.++....+........+|+.|+. . +|++||.+||.++|++
T Consensus       254 ~~lh~~~d~~~~~~l~~~~~~L-~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~g~~~t~~e~~~ll~~  330 (352)
T 1fp2_A          254 YILHNWTDKDCLRILKKCKEAV-TNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGKERNEEEWKKLFIE  330 (352)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHH-SGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCCCEEHHHHHHHHHH
T ss_pred             hhhccCCHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-cCCCCCHHHHHHHHHH
Confidence            5899999999999999999999 99   999999999988654321111234578888887 4 6999999999999999


Q ss_pred             cCCCeeEEEEcCCCeeEEEEEC
Q 037161           78 AGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        78 aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      |||+.+++.+.++..++||++|
T Consensus       331 aGf~~~~~~~~~~~~~vie~~~  352 (352)
T 1fp2_A          331 AGFQHYKISPLTGFLSLIEIYP  352 (352)
T ss_dssp             TTCCEEEEEEEETTEEEEEEEC
T ss_pred             CCCCeeEEEecCCCcEEEEEeC
Confidence            9999999999888889999987

>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*

Probab=99.80  E-value=1.3e-19  Score=126.95  Aligned_cols=97  Identities=39%  Similarity=0.737  Sum_probs=81.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++||+|+|+++.++|++++++| +|||+++|.|.+.++....+...+....+|+.|+... +|++||.+||.++|++|||
T Consensus       275 ~~lh~~~d~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~t~~e~~~ll~~aGf  352 (372)
T 1fp1_D          275 AVCHNWSDEKCIEFLSNCHKAL-SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGF  352 (372)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHH-SCCCEEHHHHHHHHHHTTC
T ss_pred             cccccCCHHHHHHHHHHHHHhc-CCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhcc-CCccCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 9999999999998876543222223467888888754 7999999999999999999


Q ss_pred             CeeEEEEc-CCCeeEEEEEC
Q 037161           81 SGIRFQCF-VCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~-~~~~~vie~~k   99 (99)
                      +++++.+. .+..++||++|
T Consensus       353 ~~~~~~~~~~~~~~vie~~~  372 (372)
T 1fp1_D          353 SKFQVACRAFNSLGVMEFYK  372 (372)
T ss_dssp             SEEEEEEEETTTEEEEEEEC
T ss_pred             ceEEEEEcCCCCeEEEEEeC
Confidence            99999984 44369999987

>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}

Probab=99.76  E-value=2.9e-18  Score=118.89  Aligned_cols=93  Identities=10%  Similarity=0.179  Sum_probs=79.6

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++||+|+|+++.++|++++++| +|||+++|.|.+.++....+   .....+|+.|+..+.+|++||.+||.++|++|||
T Consensus       256 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf  331 (352)
T 3mcz_A          256 DCLHYFDAREAREVIGHAAGLV-KPGGALLILTMTMNDDRVTP---ALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGL  331 (352)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHTE-EEEEEEEEEEECCCTTSSSS---HHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTC
T ss_pred             cccccCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCCC---chHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 99999999999988765433   2346789998876558999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      ++++..  .+..+++.++|
T Consensus       332 ~~~~~~--~g~~~l~~a~k  348 (352)
T 3mcz_A          332 AVGERS--IGRYTLLIGQR  348 (352)
T ss_dssp             EEEEEE--ETTEEEEEEEC
T ss_pred             ceeeec--cCceEEEEEec
Confidence            999843  35688888876

>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}

Probab=99.76  E-value=1.3e-18  Score=121.67  Aligned_cols=97  Identities=15%  Similarity=0.223  Sum_probs=77.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCch-hhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSA-TSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~-~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      ++||+|+|+++.++|++++++| +|||+|+|.|.+.++...... ........++.|+... ++++||.+||.++|++||
T Consensus       256 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~AG  333 (363)
T 3dp7_A          256 QFLDCFSEEEVISILTRVAQSI-GKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANG-NSKMFHSDDLIRCIENAG  333 (363)
T ss_dssp             SCSTTSCHHHHHHHHHHHHHHC-CTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCS-SCCSCCHHHHHHHHHTTT
T ss_pred             chhhhCCHHHHHHHHHHHHHhc-CCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCC-CCcccCHHHHHHHHHHcC
Confidence            5899999999999999999999 999999999998886543211 0011133455556554 789999999999999999


Q ss_pred             CCeeEEEEcC-CCeeEEEEEC
Q 037161           80 FSGIRFQCFV-CNSWVMEFYK   99 (99)
Q Consensus        80 f~~~~~~~~~-~~~~vie~~k   99 (99)
                      |+++++.+.. ...++||+.|
T Consensus       334 f~~v~~~~~~g~~~svi~~~~  354 (363)
T 3dp7_A          334 LEVEEIQDNIGLGHSILQCRL  354 (363)
T ss_dssp             EEESCCCCCBTTTBEEEEEEE
T ss_pred             CeEEEEEeCCCCCceEEEEee
Confidence            9999998764 4689999875

>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*

Probab=99.72  E-value=6.6e-18  Score=117.41  Aligned_cols=93  Identities=23%  Similarity=0.397  Sum_probs=80.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeee-cCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV-LPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~-~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      +++|+|+|+++.++|++++++| +|||+++|.|.+ .++.....    ....+|+.|+... +|+.||.++|.++|++||
T Consensus       257 ~vl~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~aG  330 (360)
T 1tw3_A          257 FVLLNWPDHDAVRILTRCAEAL-EPGGRILIHERDDLHENSFNE----QFTELDLRMLVFL-GGALRTREKWDGLAASAG  330 (360)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHTE-EEEEEEEEEECCBCGGGCCSH----HHHHHHHHHHHHH-SCCCCBHHHHHHHHHHTT
T ss_pred             ccccCCCHHHHHHHHHHHHHhc-CCCcEEEEEEEeccCCCCCcc----hhhhccHHHhhhc-CCcCCCHHHHHHHHHHCC
Confidence            5899999999999999999999 999999999998 76543322    3356788887765 899999999999999999


Q ss_pred             CCeeEEEEcCCC-----eeEEEEEC
Q 037161           80 FSGIRFQCFVCN-----SWVMEFYK   99 (99)
Q Consensus        80 f~~~~~~~~~~~-----~~vie~~k   99 (99)
                      |+++++.+.++.     .++||++|
T Consensus       331 f~~~~~~~~~~~~~~~~~~~i~~~~  355 (360)
T 1tw3_A          331 LVVEEVRQLPSPTIPYDLSLLVLAP  355 (360)
T ss_dssp             EEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred             CeEEEEEeCCCCcccCccEEEEEEe
Confidence            999999988765     89999986

>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}

Probab=99.71  E-value=3.9e-17  Score=112.25  Aligned_cols=94  Identities=20%  Similarity=0.334  Sum_probs=81.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+|+++++.++|++++++| +|||+++|.|...++....+   .....+|+.|+....+++.||.++|.++++++||
T Consensus       240 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf  315 (335)
T 2r3s_A          240 NFLHHFDVATCEQLLRKIKTAL-AVEGKVIVFDFIPNSDRITP---PDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGF  315 (335)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEECCCCTTSSCS---HHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTC
T ss_pred             chhccCCHHHHHHHHHHHHHhC-CCCcEEEEEeecCCCCcCCc---hHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 99999999999887654332   2346788888876558999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEE
Q 037161           81 SGIRFQCFVCNSWVMEFY   98 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~   98 (99)
                      +.+++.++.+..++|+++
T Consensus       316 ~~~~~~~~~~~~~~i~~~  333 (335)
T 2r3s_A          316 SHSQLHSLPTTQQQVIVA  333 (335)
T ss_dssp             SEEEEECCTTSSSEEEEE
T ss_pred             CeeeEEECCCCceeEEEe
Confidence            999999988888888875

>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*

Probab=99.70  E-value=1.7e-17  Score=115.73  Aligned_cols=93  Identities=29%  Similarity=0.502  Sum_probs=76.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEee--ecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHc
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEA--VLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAA   78 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~--~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~a   78 (99)
                      +++|+|+|+++.++|++++++| +|||+++|.|.  +.++....    .....+|+.|+... +|+.||.++|.++|+++
T Consensus       256 ~vl~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~a  329 (374)
T 1qzz_A          256 FVLLNWSDEDALTILRGCVRAL-EPGGRLLVLDRADVEGDGADR----FFSTLLDLRMLTFM-GGRVRTRDEVVDLAGSA  329 (374)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEECCH-------H----HHHHHHHHHHHHHH-SCCCCCHHHHHHHHHTT
T ss_pred             ccccCCCHHHHHHHHHHHHHhc-CCCcEEEEEechhhcCCCCCc----chhhhcchHHHHhC-CCcCCCHHHHHHHHHHC
Confidence            5899999999999999999999 99999999999  87654321    23457788888765 89999999999999999


Q ss_pred             CCCeeEEEEcCCCe-----eEEEEEC
Q 037161           79 GFSGIRFQCFVCNS-----WVMEFYK   99 (99)
Q Consensus        79 Gf~~~~~~~~~~~~-----~vie~~k   99 (99)
                      ||+++++.+.++..     ++||++|
T Consensus       330 Gf~~~~~~~~~~~~~~~~~~~i~~~~  355 (374)
T 1qzz_A          330 GLALASERTSGSTTLPFDFSILEFTA  355 (374)
T ss_dssp             TEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred             CCceEEEEECCCCcccCCcEEEEEEE
Confidence            99999999988777     9999975

>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*

Probab=99.68  E-value=2e-16  Score=110.16  Aligned_cols=91  Identities=9%  Similarity=0.231  Sum_probs=75.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCcee----cCHHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKV----RTKHEFINLAT   76 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~----rt~~e~~~ll~   76 (99)
                      +++|+|+|+++.++|++++++| +|||+++|.|.+.++...+.    ....+  .|+....+|++    ||.+||.++|+
T Consensus       264 ~vlh~~~d~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~----~~~~~--~~~~~~~~g~~~~~~~t~~e~~~ll~  336 (359)
T 1x19_A          264 RILYSANEQLSTIMCKKAFDAM-RSGGRLLILDMVIDDPENPN----FDYLS--HYILGAGMPFSVLGFKEQARYKEILE  336 (359)
T ss_dssp             SCGGGSCHHHHHHHHHHHHTTC-CTTCEEEEEEECCCCTTSCC----HHHHH--HHGGGGGSSCCCCCCCCGGGHHHHHH
T ss_pred             chhccCCHHHHHHHHHHHHHhc-CCCCEEEEEecccCCCCCch----HHHHH--HHHHhcCCCCcccCCCCHHHHHHHHH
Confidence            5899999999999999999999 99999999999887652221    12233  44443335888    99999999999


Q ss_pred             HcCCCeeEEEEcCCCeeEEEEEC
Q 037161           77 AAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        77 ~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      +|||+++++.+.+ ..++|+++|
T Consensus       337 ~aGf~~v~~~~~~-~~~vi~a~k  358 (359)
T 1x19_A          337 SLGYKDVTMVRKY-DHLLVQAVK  358 (359)
T ss_dssp             HHTCEEEEEEEET-TEEEEEEEC
T ss_pred             HCCCceEEEEecC-CceEEEEeC
Confidence            9999999999987 889999987

>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}

Probab=99.05  E-value=5.7e-10  Score=72.81  Aligned_cols=96  Identities=22%  Similarity=0.148  Sum_probs=66.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhh------------ch-HhhhcCCCceecC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQI------------DV-FMLTHSPRGKVRT   67 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~------------dl-~m~~~~~~g~~rt   67 (99)
                      +++|++++++..++|+++++.| +|||++++.+...++.....  ......+            ++ ..+......+.+|
T Consensus       117 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (234)
T 3dtn_A          117 LSIHHLEDEDKKELYKRSYSIL-KESGIFINADLVHGETAFIE--NLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIE  193 (234)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEECBCSSHHHH--HHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCB
T ss_pred             CccccCCHHHHHHHHHHHHHhc-CCCcEEEEEEecCCCChhhh--hHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccC
Confidence            4789999999999999999999 99999999998776542110  0000000            00 0000112456789


Q ss_pred             HHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161           68 KHEFINLATAAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        68 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      .++|.++|++|||+.+++.......+++-.+|
T Consensus       194 ~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~  225 (234)
T 3dtn_A          194 MNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK  225 (234)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred             HHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence            99999999999999999987766777766543

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=98.98  E-value=2.5e-09  Score=71.90  Aligned_cols=95  Identities=15%  Similarity=0.035  Sum_probs=62.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhh-hhhchHhhh-------------cCCCceecC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKAN-SQIDVFMLT-------------HSPRGKVRT   67 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~-~~~dl~m~~-------------~~~~g~~rt   67 (99)
                      +||..++++..++|++++++| +|||++++.|...++.+...  .... ...++....             ...--..+|
T Consensus       148 ~l~~~~~~~~~~~l~~i~~~L-kpGG~lii~e~~~~~~~~~~--~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s  224 (261)
T 4gek_A          148 TLQFLEPSERQALLDKIYQGL-NPGGALVLSEKFSFEDAKVG--ELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS  224 (261)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEBCCSSHHHH--HHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred             eeeecCchhHhHHHHHHHHHc-CCCcEEEEEeccCCCCHHHH--HHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence            689999999999999999999 99999999998876542110  0000 000110000             000013578


Q ss_pred             HHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161           68 KHEFINLATAAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        68 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      .+++.++|++|||+.++++--.-.+..+-|+|
T Consensus       225 ~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K  256 (261)
T 4gek_A          225 VETHKARLHKAGFEHSELWFQCFNFGSLVALK  256 (261)
T ss_dssp             HHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred             HHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence            99999999999999998863323444455665

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=98.83  E-value=2.2e-08  Score=64.60  Aligned_cols=94  Identities=14%  Similarity=0.174  Sum_probs=60.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhh---chHhhhc-CCCceecCHHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQI---DVFMLTH-SPRGKVRTKHEFINLAT   76 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~---dl~m~~~-~~~g~~rt~~e~~~ll~   76 (99)
                      +++|++++.+..++|+++++.| +|||++++.+...+.....   .......   ....... .......|.++|.++|+
T Consensus       114 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  189 (220)
T 3hnr_A          114 YAFHHLTDDEKNVAIAKYSQLL-NKGGKIVFADTIFADQDAY---DKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFE  189 (220)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHS-CTTCEEEEEEECBSSHHHH---HHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred             cchhcCChHHHHHHHHHHHHhc-CCCCEEEEEeccccChHHH---HHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHH
Confidence            4789999999889999999999 9999999998765432110   0000000   0000000 00113448899999999


Q ss_pred             HcCCCeeEEEEcCCCeeEEEEEC
Q 037161           77 AAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        77 ~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      ++||+++.+.. .....++++.|
T Consensus       190 ~aGf~v~~~~~-~~~~w~~~~~~  211 (220)
T 3hnr_A          190 NNGFHVTFTRL-NHFVWVMEATK  211 (220)
T ss_dssp             HTTEEEEEEEC-SSSEEEEEEEE
T ss_pred             HCCCEEEEeec-cceEEEEeehh
Confidence            99998776544 46677777654

>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}

Probab=98.80  E-value=2.3e-09  Score=69.81  Aligned_cols=97  Identities=14%  Similarity=0.087  Sum_probs=61.5

Q ss_pred             ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhh--------------------hhhhhchHhhhcC
Q 037161            2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSK--------------------ANSQIDVFMLTHS   60 (99)
Q Consensus         2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~--------------------~~~~~dl~m~~~~   60 (99)
                      ++|+. +.++..++|+++++.| +|||++++.+...++...+.....                    .....++.++...
T Consensus       110 ~~~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (239)
T 3bxo_A          110 SVGYLKTTEELGAAVASFAEHL-EPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVAD  188 (239)
T ss_dssp             GGGGCCSHHHHHHHHHHHHHTE-EEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             hHhhcCCHHHHHHHHHHHHHhc-CCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEec
Confidence            56666 4478899999999999 999999997765543321100000                    0001112222111


Q ss_pred             CCc-----------eecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161           61 PRG-----------KVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        61 ~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      .++           +.+|.++|.++|++|||+++.+....+...++.|+|
T Consensus       189 ~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K  238 (239)
T 3bxo_A          189 PGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP  238 (239)
T ss_dssp             TTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred             CCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence            122           457999999999999997777655556778888876

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=98.75  E-value=6.9e-08  Score=62.16  Aligned_cols=79  Identities=18%  Similarity=0.074  Sum_probs=60.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+++|  ...+|+++++.| +|||++++.+..........                 .....++.++|.++++++||
T Consensus       114 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~Gf  173 (219)
T 3dh0_A          114 FTFHELSE--PLKFLEELKRVA-KPFAYLAIIDWKKEERDKGP-----------------PPEEVYSEWEVGLILEDAGI  173 (219)
T ss_dssp             SCGGGCSS--HHHHHHHHHHHE-EEEEEEEEEEECSSCCSSSC-----------------CGGGSCCHHHHHHHHHHTTC
T ss_pred             hhhhhcCC--HHHHHHHHHHHh-CCCeEEEEEEecccccccCC-----------------chhcccCHHHHHHHHHHCCC
Confidence            36788876  578999999999 99999999987655432211                 01234688999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEEC
Q 037161           81 SGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~k   99 (99)
                      +++++.........+.++|
T Consensus       174 ~~~~~~~~~~~~~~~~~~k  192 (219)
T 3dh0_A          174 RVGRVVEVGKYCFGVYAMI  192 (219)
T ss_dssp             EEEEEEEETTTEEEEEEEC
T ss_pred             EEEEEEeeCCceEEEEEEe
Confidence            9999998877766666654

>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*

Probab=98.73  E-value=4.8e-09  Score=69.62  Aligned_cols=97  Identities=16%  Similarity=0.097  Sum_probs=61.8

Q ss_pred             ccccCCh-HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhh--------------------hhhhhhchHhhhcC
Q 037161            2 ILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATS--------------------KANSQIDVFMLTHS   60 (99)
Q Consensus         2 vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~--------------------~~~~~~dl~m~~~~   60 (99)
                      ++|.+++ ++..++|+++++.| +|||+++|.+...++.-.+....                    .....+++.++...
T Consensus       120 ~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (263)
T 3pfg_A          120 SIGHLAGQAELDAALERFAAHV-LPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAG  198 (263)
T ss_dssp             GGGGSCHHHHHHHHHHHHHHTE-EEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             hhhhcCCHHHHHHHHHHHHHhc-CCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEec
Confidence            6777755 67889999999999 99999999654433321110000                    00011122222111


Q ss_pred             CC-----------ceecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161           61 PR-----------GKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        61 ~~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      .+           .+.+|.+||.++|++|||+++++....+...++.++|
T Consensus       199 ~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K  248 (263)
T 3pfg_A          199 PDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP  248 (263)
T ss_dssp             TTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred             CCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence            11           3456899999999999999999876666667777765

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=98.69  E-value=6.3e-08  Score=64.91  Aligned_cols=87  Identities=14%  Similarity=0.157  Sum_probs=60.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCC-----CchhhhhhhhhchHhhhcCCCceecCHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPE-----NSATSKANSQIDVFMLTHSPRGKVRTKHEFINLA   75 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~-----~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll   75 (99)
                      .++|++++++..++|+++++.| +|||++++.+...+....     .+.........+...-....++...|.++|.+++
T Consensus       137 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l  215 (287)
T 1kpg_A          137 GAFEHFGHERYDAFFSLAHRLL-PADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECA  215 (287)
T ss_dssp             SCGGGTCTTTHHHHHHHHHHHS-CTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHH
T ss_pred             CchhhcChHHHHHHHHHHHHhc-CCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHH
Confidence            3688898888899999999999 999999999987654211     0000000011111111112367888999999999


Q ss_pred             HHcCCCeeEEEEc
Q 037161           76 TAAGFSGIRFQCF   88 (99)
Q Consensus        76 ~~aGf~~~~~~~~   88 (99)
                      +++||+++++...
T Consensus       216 ~~aGf~~~~~~~~  228 (287)
T 1kpg_A          216 SANGFTVTRVQSL  228 (287)
T ss_dssp             HTTTCEEEEEEEC
T ss_pred             HhCCcEEEEEEeC
Confidence            9999999998765

>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42

Probab=98.69  E-value=5.2e-08  Score=63.97  Aligned_cols=74  Identities=14%  Similarity=0.183  Sum_probs=57.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|++++++..++|+++++.| +|||+++|.+........         ..+     .......||.++|.++|+++||
T Consensus       166 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~l~~aGf  230 (254)
T 1xtp_A          166 WTAIYLTDADFVKFFKHCQQAL-TPNGYIFFKENCSTGDRF---------LVD-----KEDSSLTRSDIHYKRLFNESGV  230 (254)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEBC--CCE---------EEE-----TTTTEEEBCHHHHHHHHHHHTC
T ss_pred             chhhhCCHHHHHHHHHHHHHhc-CCCeEEEEEecCCCcccc---------eec-----ccCCcccCCHHHHHHHHHHCCC
Confidence            4789999999999999999999 999999999975443210         111     1124567899999999999999


Q ss_pred             CeeEEEEcC
Q 037161           81 SGIRFQCFV   89 (99)
Q Consensus        81 ~~~~~~~~~   89 (99)
                      +++++....
T Consensus       231 ~~~~~~~~~  239 (254)
T 1xtp_A          231 RVVKEAFQE  239 (254)
T ss_dssp             CEEEEEECT
T ss_pred             EEEEeeecC
Confidence            999987654

>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42

Probab=98.68  E-value=5.9e-08  Score=63.63  Aligned_cols=73  Identities=16%  Similarity=0.275  Sum_probs=59.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|++++++..++|+++++.| +|||++++.+...+.   ..       .++-     ..+...|+.++|.++|+++||
T Consensus       154 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~---~~-------~~~~-----~~~~~~~~~~~~~~~l~~aGf  217 (241)
T 2ex4_A          154 WVIGHLTDQHLAEFLRRCKGSL-RPNGIIVIKDNMAQE---GV-------ILDD-----VDSSVCRDLDVVRRIICSAGL  217 (241)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEBSS---SE-------EEET-----TTTEEEEBHHHHHHHHHHTTC
T ss_pred             chhhhCCHHHHHHHHHHHHHhc-CCCeEEEEEEccCCC---cc-------eecc-----cCCcccCCHHHHHHHHHHcCC
Confidence            3689999998999999999999 999999999987664   11       1111     125667899999999999999


Q ss_pred             CeeEEEEcC
Q 037161           81 SGIRFQCFV   89 (99)
Q Consensus        81 ~~~~~~~~~   89 (99)
                      +++++....
T Consensus       218 ~~~~~~~~~  226 (241)
T 2ex4_A          218 SLLAEERQE  226 (241)
T ss_dssp             CEEEEEECC
T ss_pred             eEEEeeecC
Confidence            999998654

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=98.63  E-value=8.8e-08  Score=61.36  Aligned_cols=85  Identities=14%  Similarity=0.056  Sum_probs=52.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCc------eecCHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRG------KVRTKHEFINL   74 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g------~~rt~~e~~~l   74 (99)
                      +++|++++++...+|+++++.| +|||++++.+...+..........  .......-....+.      ...|.++|.++
T Consensus       115 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (218)
T 3ou2_A          115 HWLAHVPDDRFEAFWESVRSAV-APGGVVEFVDVTDHERRLEQQDDS--EPEVAVRRTLQDGRSFRIVKVFRSPAELTER  191 (218)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEECCCC--------------CEEEEECTTSCEEEEECCCCCHHHHHHH
T ss_pred             chhhcCCHHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccccchhhhc--ccccceeeecCCcchhhHhhcCCCHHHHHHH
Confidence            4789999999999999999999 999999999876532211100000  00000000001122      23499999999


Q ss_pred             HHHcCCCeeEEEEc
Q 037161           75 ATAAGFSGIRFQCF   88 (99)
Q Consensus        75 l~~aGf~~~~~~~~   88 (99)
                      ++++||++......
T Consensus       192 l~~aGf~v~~~~~~  205 (218)
T 3ou2_A          192 LTALGWSCSVDEVH  205 (218)
T ss_dssp             HHHTTEEEEEEEEE
T ss_pred             HHHCCCEEEeeecc
Confidence            99999995544433

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=98.63  E-value=8.5e-08  Score=61.14  Aligned_cols=82  Identities=12%  Similarity=-0.006  Sum_probs=61.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|++++++..++|+++++.| +|||++++.+...+..  ..        ++-   ... ....+|.++|.++|+++||
T Consensus       110 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~i~~~~~~~~--~~--------~~~---~~~-~~~~~~~~~~~~~l~~~Gf  174 (203)
T 3h2b_A          110 YSLIHMGPGELPDALVALRMAV-EDGGGLLMSFFSGPSL--EP--------MYH---PVA-TAYRWPLPELAQALETAGF  174 (203)
T ss_dssp             SSSTTCCTTTHHHHHHHHHHTE-EEEEEEEEEEECCSSC--EE--------ECC---SSS-CEEECCHHHHHHHHHHTTE
T ss_pred             hhHhcCCHHHHHHHHHHHHHHc-CCCcEEEEEEccCCch--hh--------hhc---hhh-hhccCCHHHHHHHHHHCCC
Confidence            3688999888999999999999 9999999987543321  00        000   011 4577899999999999999


Q ss_pred             CeeEEEEcCC-CeeEEEE
Q 037161           81 SGIRFQCFVC-NSWVMEF   97 (99)
Q Consensus        81 ~~~~~~~~~~-~~~vie~   97 (99)
                      +++++..... +...+..
T Consensus       175 ~~~~~~~~~~~p~~~l~~  192 (203)
T 3h2b_A          175 QVTSSHWDPRFPHAYLTA  192 (203)
T ss_dssp             EEEEEEECTTSSEEEEEE
T ss_pred             cEEEEEecCCCcchhhhh
Confidence            9999987653 5555543

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=98.61  E-value=1.4e-07  Score=61.90  Aligned_cols=80  Identities=19%  Similarity=0.265  Sum_probs=56.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+|+|  ..++|+++++.| +|||++++.+...+...   .....  ...+..+....+.+.++.++|.++|+++||
T Consensus        95 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf  166 (239)
T 1xxl_A           95 YAAHHFSD--VRKAVREVARVL-KQDGRFLLVDHYAPEDP---VLDEF--VNHLNRLRDPSHVRESSLSEWQAMFSANQL  166 (239)
T ss_dssp             SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECBCSSH---HHHHH--HHHHHHHHCTTCCCCCBHHHHHHHHHHTTE
T ss_pred             CchhhccC--HHHHHHHHHHHc-CCCcEEEEEEcCCCCCh---hHHHH--HHHHHHhccccccCCCCHHHHHHHHHHCCC
Confidence            36889987  568999999999 99999999998765431   11111  111111211224677899999999999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      +++++...
T Consensus       167 ~~~~~~~~  174 (239)
T 1xxl_A          167 AYQDIQKW  174 (239)
T ss_dssp             EEEEEEEE
T ss_pred             cEEEEEee
Confidence            99887654

>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=98.61  E-value=1.5e-08  Score=65.51  Aligned_cols=95  Identities=14%  Similarity=0.092  Sum_probs=59.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh---hhcC----------C-------
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM---LTHS----------P-------   61 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m---~~~~----------~-------   61 (99)
                      ++|.+..++..++|+++++.| +|||++++.+...+...... ........+..+   +...          .       
T Consensus       112 ~~~~~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (227)
T 1ve3_A          112 SIVHFEPLELNQVFKEVRRVL-KPSGKFIMYFTDLRELLPRL-KESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRV  189 (227)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHE-EEEEEEEEEEECHHHHGGGC-CC---------CCEEEEETTTTEEEEEC-----CCEE
T ss_pred             chHhCCHHHHHHHHHHHHHHc-CCCcEEEEEecChHHHHHHH-HhhhhcccceeecccccCccccEEEEEeccchhhhee
Confidence            466778888999999999999 99999999886432110000 000000000000   0000          0       


Q ss_pred             CceecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161           62 RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        62 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      ....++ .+|.++|+++||+.+++.+++....+|+++|
T Consensus       190 ~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~  226 (227)
T 1ve3_A          190 RFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP  226 (227)
T ss_dssp             EEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred             ehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence            011222 4899999999999999999987888999876

>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}

Probab=98.60  E-value=5e-08  Score=65.89  Aligned_cols=74  Identities=15%  Similarity=0.129  Sum_probs=54.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      .+||+++|++...+|++++++| +|||+++|.+...+.   +..   .....+....... ....||.+|+.++|  +||
T Consensus       165 ~vlh~~~d~~~~~~l~~~~~~L-~pGG~l~i~~~~~~~---~~~---~~~~~~~~~~~~~-~~~~~s~~ei~~~l--~G~  234 (274)
T 2qe6_A          165 GMLHYLSPDVVDRVVGAYRDAL-APGSYLFMTSLVDTG---LPA---QQKLARITRENLG-EGWARTPEEIERQF--GDF  234 (274)
T ss_dssp             TTGGGSCTTTHHHHHHHHHHHS-CTTCEEEEEEEBCSS---CHH---HHHHHHHHHHHHS-CCCCBCHHHHHHTT--TTC
T ss_pred             chhhhCCcHHHHHHHHHHHHhC-CCCcEEEEEEecCcc---hHH---HHHHHHHHHhcCC-CCccCCHHHHHHHh--CCC
Confidence            3799999999999999999999 999999999976432   111   1122333222222 46789999999999  599


Q ss_pred             CeeE
Q 037161           81 SGIR   84 (99)
Q Consensus        81 ~~~~   84 (99)
                      ++++
T Consensus       235 ~l~~  238 (274)
T 2qe6_A          235 ELVE  238 (274)
T ss_dssp             EECT
T ss_pred             eEcc
Confidence            8775

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=98.60  E-value=1.6e-07  Score=61.85  Aligned_cols=80  Identities=20%  Similarity=0.326  Sum_probs=59.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|++++++..++|+++++.| +|||++++.+...+......      ..+.-... .. +...+|.++|.++++++||
T Consensus       128 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~------~~~~~~~~-~~-~~~~~~~~~~~~~l~~~Gf  198 (266)
T 3ujc_A          128 DAILALSLENKNKLFQKCYKWL-KPTGTLLITDYCATEKENWD------DEFKEYVK-QR-KYTLITVEEYADILTACNF  198 (266)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEESCGGGCC------HHHHHHHH-HH-TCCCCCHHHHHHHHHHTTC
T ss_pred             HHHHhcChHHHHHHHHHHHHHc-CCCCEEEEEEeccCCcccch------HHHHHHHh-cC-CCCCCCHHHHHHHHHHcCC
Confidence            3789998899999999999999 99999999998766521111      11111111 11 4567899999999999999


Q ss_pred             CeeEEEEcC
Q 037161           81 SGIRFQCFV   89 (99)
Q Consensus        81 ~~~~~~~~~   89 (99)
                      +++++....
T Consensus       199 ~~~~~~~~~  207 (266)
T 3ujc_A          199 KNVVSKDLS  207 (266)
T ss_dssp             EEEEEEECH
T ss_pred             eEEEEEeCC
Confidence            999987653

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=98.59  E-value=7.8e-09  Score=66.20  Aligned_cols=91  Identities=14%  Similarity=0.185  Sum_probs=56.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhh-hchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQ-IDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~-~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      +++|+++|  ..++|+++++.| +|||++++.+...+.............. ......... +...+|.++|.++|+++|
T Consensus       119 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~aG  194 (219)
T 3dlc_A          119 GSVFFWED--VATAFREIYRIL-KSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRK-NISQENVERFQNVLDEIG  194 (219)
T ss_dssp             SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHH-HSSHHHHHHHHHHHHHHT
T ss_pred             chHhhccC--HHHHHHHHHHhC-CCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhh-ccccCCHHHHHHHHHHcC
Confidence            36788866  678999999999 9999999987543321000000000000 000000001 345668899999999999


Q ss_pred             CCeeEEEEcCCCeeEE
Q 037161           80 FSGIRFQCFVCNSWVM   95 (99)
Q Consensus        80 f~~~~~~~~~~~~~vi   95 (99)
                      |+.+++........++
T Consensus       195 f~~v~~~~~~~~~~~~  210 (219)
T 3dlc_A          195 ISSYEIILGDEGFWII  210 (219)
T ss_dssp             CSSEEEEEETTEEEEE
T ss_pred             CCeEEEEecCCceEEE
Confidence            9999998776655544

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=98.59  E-value=1.9e-07  Score=61.75  Aligned_cols=79  Identities=20%  Similarity=0.391  Sum_probs=56.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhc-hHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQID-VFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~d-l~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      .++|+|+|.  ..+|++++++| +|||++++.+...+..+   ...   ..+. +..+........++.++|.++|+++|
T Consensus       111 ~~l~~~~d~--~~~l~~~~r~L-kpgG~l~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG  181 (260)
T 1vl5_A          111 IAAHHFPNP--ASFVSEAYRVL-KKGGQLLLVDNSAPEND---AFD---VFYNYVEKERDYSHHRAWKKSDWLKMLEEAG  181 (260)
T ss_dssp             SCGGGCSCH--HHHHHHHHHHE-EEEEEEEEEEEEBCSSH---HHH---HHHHHHHHHHCTTCCCCCBHHHHHHHHHHHT
T ss_pred             hhhHhcCCH--HHHHHHHHHHc-CCCCEEEEEEcCCCCCH---HHH---HHHHHHHHhcCccccCCCCHHHHHHHHHHCC
Confidence            368999874  58999999999 99999999998766431   111   1111 11121122457789999999999999


Q ss_pred             CCeeEEEEc
Q 037161           80 FSGIRFQCF   88 (99)
Q Consensus        80 f~~~~~~~~   88 (99)
                      |+++.+...
T Consensus       182 f~~~~~~~~  190 (260)
T 1vl5_A          182 FELEELHCF  190 (260)
T ss_dssp             CEEEEEEEE
T ss_pred             CeEEEEEEe
Confidence            999887654

>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}

Probab=98.59  E-value=4.9e-07  Score=61.36  Aligned_cols=96  Identities=16%  Similarity=0.123  Sum_probs=59.6

Q ss_pred             ccccCC-hHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhh----hhh----hhhc--hHhhhcCCCceecCHHH
Q 037161            2 ILHAWS-DEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATS----KAN----SQID--VFMLTHSPRGKVRTKHE   70 (99)
Q Consensus         2 vlHdw~-d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~----~~~----~~~d--l~m~~~~~~g~~rt~~e   70 (99)
                      ++|.++ ++...++|+++++.| +|||++++.+...+...... ..    ...    ....  +...........+|.++
T Consensus       196 ~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (305)
T 3ocj_A          196 LNIYEPDDARVTELYRRFWQAL-KPGGALVTSFLTPPPALSPD-SPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ  273 (305)
T ss_dssp             SGGGCCCHHHHHHHHHHHHHHE-EEEEEEEEECCCCCTTTCTT-CCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred             hhhhcCCHHHHHHHHHHHHHhc-CCCeEEEEEecCCCCccccc-ccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence            578885 445668999999999 99999999886544332111 00    000    0000  11111110114489999


Q ss_pred             HHHHHHHcCCCeeEEEEcC-CCeeEEEEEC
Q 037161           71 FINLATAAGFSGIRFQCFV-CNSWVMEFYK   99 (99)
Q Consensus        71 ~~~ll~~aGf~~~~~~~~~-~~~~vie~~k   99 (99)
                      +.++|+++||+++++.... .....+.++|
T Consensus       274 ~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K  303 (305)
T 3ocj_A          274 TRAQLEEAGFTDLRFEDDRARLFPTVIARK  303 (305)
T ss_dssp             HHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred             HHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence            9999999999999998654 3444555554

>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*

Probab=98.58  E-value=8.9e-08  Score=64.73  Aligned_cols=97  Identities=11%  Similarity=0.160  Sum_probs=61.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchh--hhh----hh-------------hhchHhhh----
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSAT--SKA----NS-------------QIDVFMLT----   58 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~--~~~----~~-------------~~dl~m~~----   58 (99)
                      ++|.+++++..++|+++++.| +|||++++.....+........  ..+    ..             ...+.+..    
T Consensus       160 ~~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T 3g2m_A          160 SINELDEADRRGLYASVREHL-EPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADET  238 (299)
T ss_dssp             HHTTSCHHHHHHHHHHHHHHE-EEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC-
T ss_pred             ccccCCHHHHHHHHHHHHHHc-CCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCC
Confidence            467778888999999999999 9999999876543311000000  000    00             00011000    


Q ss_pred             ------cCCCceecCHHHHHHHHHHcCCCeeEEEEcCC------CeeEEEEEC
Q 037161           59 ------HSPRGKVRTKHEFINLATAAGFSGIRFQCFVC------NSWVMEFYK   99 (99)
Q Consensus        59 ------~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~------~~~vie~~k   99 (99)
                            ....-+.+|.+||.++|++|||+++++.++..      ...++|+.+
T Consensus       239 ~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~  291 (299)
T 3g2m_A          239 TDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM  291 (299)
T ss_dssp             -CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred             CCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence                  00023367999999999999999999998752      346888753

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=98.54  E-value=4.4e-07  Score=61.73  Aligned_cols=87  Identities=17%  Similarity=0.291  Sum_probs=60.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCc----hhh-hhhhhhchHhhhcCCCceecCHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENS----ATS-KANSQIDVFMLTHSPRGKVRTKHEFINLA   75 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~----~~~-~~~~~~dl~m~~~~~~g~~rt~~e~~~ll   75 (99)
                      .++|++++++..++|+++++.| +|||++++.+...+......    ... ......+...-....++..+|.+++.+++
T Consensus       163 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l  241 (318)
T 2fk8_A          163 EAFEHFGHENYDDFFKRCFNIM-PADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHG  241 (318)
T ss_dssp             SCGGGTCGGGHHHHHHHHHHHS-CTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHH
T ss_pred             ChHHhcCHHHHHHHHHHHHHhc-CCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHH
Confidence            3688898888999999999999 99999999998765421100    000 00001111111112367888999999999


Q ss_pred             HHcCCCeeEEEEc
Q 037161           76 TAAGFSGIRFQCF   88 (99)
Q Consensus        76 ~~aGf~~~~~~~~   88 (99)
                      +++||+++++..+
T Consensus       242 ~~aGf~~~~~~~~  254 (318)
T 2fk8_A          242 EKAGFTVPEPLSL  254 (318)
T ss_dssp             HHTTCBCCCCEEC
T ss_pred             HhCCCEEEEEEec
Confidence            9999999988765

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=98.52  E-value=2.5e-07  Score=61.38  Aligned_cols=80  Identities=15%  Similarity=0.128  Sum_probs=57.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|+++|.  .++|+++++.| +|||+++|.+.......... .   ...++-..... ..+..+|.++|.++++++||+
T Consensus       138 ~l~~~~~~--~~~l~~~~~~L-~pgG~l~i~~~~~~~~~~~~-~---~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~  209 (273)
T 3bus_A          138 SLHHMPDR--GRALREMARVL-RPGGTVAIADFVLLAPVEGA-K---KEAVDAFRAGG-GVLSLGGIDEYESDVRQAELV  209 (273)
T ss_dssp             CTTTSSCH--HHHHHHHHTTE-EEEEEEEEEEEEESSCCCHH-H---HHHHHHHHHHH-TCCCCCCHHHHHHHHHHTTCE
T ss_pred             hhhhCCCH--HHHHHHHHHHc-CCCeEEEEEEeeccCCCChh-H---HHHHHHHHhhc-CccCCCCHHHHHHHHHHcCCe
Confidence            67888774  78999999999 99999999998765432211 1   11111111112 267789999999999999999


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      ++++..++
T Consensus       210 ~~~~~~~~  217 (273)
T 3bus_A          210 VTSTVDIS  217 (273)
T ss_dssp             EEEEEECH
T ss_pred             EEEEEECc
Confidence            99887653

>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}

Probab=98.52  E-value=2.1e-07  Score=60.65  Aligned_cols=69  Identities=19%  Similarity=0.192  Sum_probs=54.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|.+++++..++|+++++.| +|||++++.+.........+                   ...++.++|.++|+++||
T Consensus       140 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~l~~~Gf  199 (235)
T 3lcc_A          140 VFFCAIEPEMRPAWAKSMYELL-KPDGELITLMYPITDHVGGP-------------------PYKVDVSTFEEVLVPIGF  199 (235)
T ss_dssp             SSTTTSCGGGHHHHHHHHHHHE-EEEEEEEEEECCCSCCCSCS-------------------SCCCCHHHHHHHHGGGTE
T ss_pred             hhhhcCCHHHHHHHHHHHHHHC-CCCcEEEEEEecccccCCCC-------------------CccCCHHHHHHHHHHcCC
Confidence            3688999888999999999999 99999999886544322111                   112678999999999999


Q ss_pred             CeeEEEEcC
Q 037161           81 SGIRFQCFV   89 (99)
Q Consensus        81 ~~~~~~~~~   89 (99)
                      +++++....
T Consensus       200 ~~~~~~~~~  208 (235)
T 3lcc_A          200 KAVSVEENP  208 (235)
T ss_dssp             EEEEEEECT
T ss_pred             eEEEEEecC
Confidence            999988764

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=98.50  E-value=4e-07  Score=58.78  Aligned_cols=83  Identities=17%  Similarity=0.112  Sum_probs=54.9

Q ss_pred             CccccCCh-HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC--------------CCcee
Q 037161            1 SILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS--------------PRGKV   65 (99)
Q Consensus         1 ~vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~--------------~~g~~   65 (99)
                      +++|.++| +...++|+++++.| +|||++++.+...+... + ... .....++......              .....
T Consensus       109 ~~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (235)
T 3sm3_A          109 AFLTSVPDPKERSRIIKEVFRVL-KPGAYLYLVEFGQNWHL-K-LYR-KRYLHDFPITKEEGSFLARDPETGETEFIAHH  184 (235)
T ss_dssp             SCGGGCCCHHHHHHHHHHHHHHE-EEEEEEEEEEEBCCTTS-H-HHH-HHHHHHHHHHCSTTEEEEECTTTCCEEEEEEC
T ss_pred             chhhcCCCHHHHHHHHHHHHHHc-CCCeEEEEEECCcchhH-H-HHH-HHhhhhccchhhhcceEecccccCCcceeeEe
Confidence            36788865 45779999999999 99999999987643221 1 110 1111111111100              01257


Q ss_pred             cCHHHHHHHHHHcCCCeeEEEE
Q 037161           66 RTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus        66 rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      +|.++|.++|+++||+++++..
T Consensus       185 ~~~~~l~~ll~~aGf~~~~~~~  206 (235)
T 3sm3_A          185 FTEKELVFLLTDCRFEIDYFRV  206 (235)
T ss_dssp             BCHHHHHHHHHTTTEEEEEEEE
T ss_pred             CCHHHHHHHHHHcCCEEEEEEe
Confidence            8999999999999999999864

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=98.49  E-value=3.7e-07  Score=61.39  Aligned_cols=77  Identities=16%  Similarity=0.242  Sum_probs=56.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+++|  ..++|+++++.| +|||++++.+...+......   .....++.  . .  .....|..+|.++++++||
T Consensus       158 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~---~~~~~~~~--~-~--~~~~~~~~~~~~~l~~aGf  226 (297)
T 2o57_A          158 DAFLHSPD--KLKVFQECARVL-KPRGVMAITDPMKEDGIDKS---SIQPILDR--I-K--LHDMGSLGLYRSLAKECGL  226 (297)
T ss_dssp             SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEEEECTTCCGG---GGHHHHHH--H-T--CSSCCCHHHHHHHHHHTTE
T ss_pred             chhhhcCC--HHHHHHHHHHHc-CCCeEEEEEEeccCCCCchH---HHHHHHHH--h-c--CCCCCCHHHHHHHHHHCCC
Confidence            36888888  789999999999 99999999998766543221   11111211  1 1  2345689999999999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      +++++..+
T Consensus       227 ~~~~~~~~  234 (297)
T 2o57_A          227 VTLRTFSR  234 (297)
T ss_dssp             EEEEEEEC
T ss_pred             eEEEEEEC
Confidence            99998765

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=98.48  E-value=7e-07  Score=58.41  Aligned_cols=77  Identities=16%  Similarity=0.264  Sum_probs=56.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|++++++..++|+++++.| +|||++++......    .. .    ...+.  .....+....+.+++.++++++||
T Consensus       109 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~----~~-~----~~~~~--~~~~~~~~~~~~~~l~~~l~~aGf  176 (240)
T 3dli_A          109 HFVEHLDPERLFELLSLCYSKM-KYSSYIVIESPNPT----SL-Y----SLINF--YIDPTHKKPVHPETLKFILEYLGF  176 (240)
T ss_dssp             SCGGGSCGGGHHHHHHHHHHHB-CTTCCEEEEEECTT----SH-H----HHHHH--TTSTTCCSCCCHHHHHHHHHHHTC
T ss_pred             CchhhCCcHHHHHHHHHHHHHc-CCCcEEEEEeCCcc----hh-H----HHHHH--hcCccccccCCHHHHHHHHHHCCC
Confidence            4789999988999999999999 99999998664311    10 1    11111  111225577899999999999999


Q ss_pred             CeeEEEEcC
Q 037161           81 SGIRFQCFV   89 (99)
Q Consensus        81 ~~~~~~~~~   89 (99)
                      +++++....
T Consensus       177 ~~~~~~~~~  185 (240)
T 3dli_A          177 RDVKIEFFE  185 (240)
T ss_dssp             EEEEEEEEC
T ss_pred             eEEEEEEec
Confidence            999987654

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=98.47  E-value=4.7e-07  Score=56.12  Aligned_cols=76  Identities=9%  Similarity=0.118  Sum_probs=57.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+++|  ...+|+++++.| +|||++++.+...+.....+.                 ....+|.++|.++++  ||
T Consensus        83 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~--Gf  140 (170)
T 3i9f_A           83 NSFHDMDD--KQHVISEVKRIL-KDDGRVIIIDWRKENTGIGPP-----------------LSIRMDEKDYMGWFS--NF  140 (170)
T ss_dssp             SCSTTCSC--HHHHHHHHHHHE-EEEEEEEEEEECSSCCSSSSC-----------------GGGCCCHHHHHHHTT--TE
T ss_pred             cchhcccC--HHHHHHHHHHhc-CCCCEEEEEEcCccccccCch-----------------HhhhcCHHHHHHHHh--Cc
Confidence            36788876  568999999999 999999999876554322110                 123378999999999  99


Q ss_pred             CeeEEEEcCCCeeEEEEE
Q 037161           81 SGIRFQCFVCNSWVMEFY   98 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~   98 (99)
                      +++++.........+.+.
T Consensus       141 ~~~~~~~~~~~~~~l~~~  158 (170)
T 3i9f_A          141 VVEKRFNPTPYHFGLVLK  158 (170)
T ss_dssp             EEEEEECSSTTEEEEEEE
T ss_pred             EEEEccCCCCceEEEEEe
Confidence            999999887666555553

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=98.45  E-value=1e-06  Score=59.54  Aligned_cols=87  Identities=16%  Similarity=0.302  Sum_probs=59.6

Q ss_pred             ccccCCh-------HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhh-----hhhhhhchHhhhcCCCceecCHH
Q 037161            2 ILHAWSD-------EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATS-----KANSQIDVFMLTHSPRGKVRTKH   69 (99)
Q Consensus         2 vlHdw~d-------~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~-----~~~~~~dl~m~~~~~~g~~rt~~   69 (99)
                      ++|+++|       +...++|+++++.| +|||+++|.+...++........     ......+...-....++...+.+
T Consensus       146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~  224 (302)
T 3hem_A          146 AFEHFADGAGDAGFERYDTFFKKFYNLT-PDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRIS  224 (302)
T ss_dssp             CGGGTTCCSSCCCTTHHHHHHHHHHHSS-CTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHH
T ss_pred             hHHhcCccccccchhHHHHHHHHHHHhc-CCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHH
Confidence            5778844       67889999999999 99999999998766431100000     00000122111123478899999


Q ss_pred             HHHHHHHHcCCCeeEEEEcC
Q 037161           70 EFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        70 e~~~ll~~aGf~~~~~~~~~   89 (99)
                      ++.++++++||+++++...+
T Consensus       225 ~~~~~l~~aGf~~~~~~~~~  244 (302)
T 3hem_A          225 QVDYYSSNAGWKVERYHRIG  244 (302)
T ss_dssp             HHHHHHHHHTCEEEEEEECG
T ss_pred             HHHHHHHhCCcEEEEEEeCc
Confidence            99999999999999987764

>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}

Probab=98.44  E-value=6.9e-07  Score=58.10  Aligned_cols=96  Identities=11%  Similarity=0.152  Sum_probs=57.2

Q ss_pred             ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-----CCCc--------hhh--------hhhhhhchHhhhc
Q 037161            2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-----PENS--------ATS--------KANSQIDVFMLTH   59 (99)
Q Consensus         2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-----~~~~--------~~~--------~~~~~~dl~m~~~   59 (99)
                      ++|++ ++++..++|+++++.| +|||++++ +...+..     ....        ...        ......++.++..
T Consensus       106 ~~~~~~~~~~~~~~l~~~~~~L-~pgG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (243)
T 3d2l_A          106 SLNYLQTEADVKQTFDSAARLL-TDGGKLLF-DVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIE  183 (243)
T ss_dssp             GGGGCCSHHHHHHHHHHHHHHE-EEEEEEEE-EEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEE
T ss_pred             chhhcCCHHHHHHHHHHHHHhc-CCCeEEEE-EcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEE
Confidence            56666 6678899999999999 99999886 3211100     0000        000        0000111222211


Q ss_pred             CCCc-----------eecCHHHHHHHHHHcCCCeeEEEEcC--------CCeeEEEEEC
Q 037161           60 SPRG-----------KVRTKHEFINLATAAGFSGIRFQCFV--------CNSWVMEFYK   99 (99)
Q Consensus        60 ~~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~--------~~~~vie~~k   99 (99)
                      ..+|           +.+|.+|+.++|++|||+++++....        +...++.|+|
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K  242 (243)
T 3d2l_A          184 GEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEK  242 (243)
T ss_dssp             CTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEE
T ss_pred             cCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEe
Confidence            1122           46799999999999999999997541        2345677765

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=98.40  E-value=6.5e-07  Score=57.35  Aligned_cols=72  Identities=10%  Similarity=0.065  Sum_probs=53.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC-
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG-   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG-   79 (99)
                      +++|++++++...+|+++++.| +|||++++..........        ....       ..-..++.++|.++|+++| 
T Consensus       110 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~--------~~~~-------~~~~~~~~~~~~~~l~~aG~  173 (211)
T 3e23_A          110 ACLLHVPRDELADVLKLIWRAL-KPGGLFYASYKSGEGEGR--------DKLA-------RYYNYPSEEWLRARYAEAGT  173 (211)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEECCSSCEE--------CTTS-------CEECCCCHHHHHHHHHHHCC
T ss_pred             CchhhcCHHHHHHHHHHHHHhc-CCCcEEEEEEcCCCcccc--------cccc-------hhccCCCHHHHHHHHHhCCC
Confidence            3789999999999999999999 999999997543221100        0000       1234578999999999999 


Q ss_pred             CCeeEEEEc
Q 037161           80 FSGIRFQCF   88 (99)
Q Consensus        80 f~~~~~~~~   88 (99)
                      |+++++...
T Consensus       174 f~~~~~~~~  182 (211)
T 3e23_A          174 WASVAVESS  182 (211)
T ss_dssp             CSEEEEEEE
T ss_pred             cEEEEEEec
Confidence            999998754

>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A

Probab=98.38  E-value=1.4e-06  Score=61.08  Aligned_cols=76  Identities=20%  Similarity=0.304  Sum_probs=55.6

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.++|  -.++|+++++.| +|||++++.+...+... ...     ...+....... .+..++.++|.++|+++||+
T Consensus       175 ~l~~~~d--~~~~l~~~~r~L-kpgG~l~i~~~~~~~~~-~~~-----~~~~~~~~~~~-~~~~~~~~~~~~ll~~aGF~  244 (383)
T 4fsd_A          175 VCNLSTN--KLALFKEIHRVL-RDGGELYFSDVYADRRL-SEA-----AQQDPILYGEC-LGGALYLEDFRRLVAEAGFR  244 (383)
T ss_dssp             CGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEEEESSCC-CHH-----HHHCHHHHHTT-CTTCCBHHHHHHHHHHTTCC
T ss_pred             chhcCCC--HHHHHHHHHHHc-CCCCEEEEEEecccccc-CHh-----HhhhHHHhhcc-cccCCCHHHHHHHHHHCCCc
Confidence            6788877  579999999999 99999999998765432 111     11122223333 56778899999999999999


Q ss_pred             eeEEEE
Q 037161           82 GIRFQC   87 (99)
Q Consensus        82 ~~~~~~   87 (99)
                      .+++..
T Consensus       245 ~v~~~~  250 (383)
T 4fsd_A          245 DVRLVS  250 (383)
T ss_dssp             CEEEEE
T ss_pred             eEEEEe
Confidence            887754

>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}

Probab=98.38  E-value=7.9e-07  Score=57.12  Aligned_cols=67  Identities=19%  Similarity=0.242  Sum_probs=52.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++| |+  +...+|+++++.| +|||++++.|....                           ..+.++|.++++++||+
T Consensus       124 ~l~-~~--~~~~~l~~~~~~L-~~gG~l~i~~~~~~---------------------------~~~~~~~~~~l~~~Gf~  172 (215)
T 2zfu_A          124 SLM-GT--NIRDFLEEANRVL-KPGGLLKVAEVSSR---------------------------FEDVRTFLRAVTKLGFK  172 (215)
T ss_dssp             CCC-SS--CHHHHHHHHHHHE-EEEEEEEEEECGGG---------------------------CSCHHHHHHHHHHTTEE
T ss_pred             hcc-cc--CHHHHHHHHHHhC-CCCeEEEEEEcCCC---------------------------CCCHHHHHHHHHHCCCE
Confidence            566 44  3689999999999 99999999874210                           11789999999999999


Q ss_pred             eeEEEEcCCCeeEEEEEC
Q 037161           82 GIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        82 ~~~~~~~~~~~~vie~~k   99 (99)
                      ++......+...++.++|
T Consensus       173 ~~~~~~~~~~~~~~~~~k  190 (215)
T 2zfu_A          173 IVSKDLTNSHFFLFDFQK  190 (215)
T ss_dssp             EEEEECCSTTCEEEEEEE
T ss_pred             EEEEecCCCeEEEEEEEe
Confidence            998766666677777764

>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43

Probab=98.36  E-value=4.2e-07  Score=59.04  Aligned_cols=95  Identities=7%  Similarity=0.000  Sum_probs=57.3

Q ss_pred             ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-----CCCch---hhh-----------hhhhhchHhhhcCC
Q 037161            2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-----PENSA---TSK-----------ANSQIDVFMLTHSP   61 (99)
Q Consensus         2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-----~~~~~---~~~-----------~~~~~dl~m~~~~~   61 (99)
                      ++|++ ++++..++|+++++.| +|||++++ +...+..     +....   ...           .....++.++... 
T Consensus       111 ~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  187 (246)
T 1y8c_A          111 STNYIIDSDDLKKYFKAVSNHL-KEGGVFIF-DINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRD-  187 (246)
T ss_dssp             GGGGCCSHHHHHHHHHHHHTTE-EEEEEEEE-EEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred             cccccCCHHHHHHHHHHHHHhc-CCCcEEEE-EecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEec-
Confidence            77888 4478899999999999 99999887 3221110     00000   000           0000111111111 


Q ss_pred             C-----------ceecCHHHHHHHHHHcCCCeeEEEEc--------CCCeeEEEEEC
Q 037161           62 R-----------GKVRTKHEFINLATAAGFSGIRFQCF--------VCNSWVMEFYK   99 (99)
Q Consensus        62 ~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~--------~~~~~vie~~k   99 (99)
                      +           -+.+|.++|.++|++|||+++++...        .+...++.|+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK  244 (246)
T 1y8c_A          188 GEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL  244 (246)
T ss_dssp             SSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred             CCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence            2           25569999999999999999999754        12445666665

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=98.36  E-value=6.8e-07  Score=59.44  Aligned_cols=82  Identities=21%  Similarity=0.267  Sum_probs=55.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCC---CCCchh-hhhhhhhchHhhhcCCCceecCHHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL---PENSAT-SKANSQIDVFMLTHSPRGKVRTKHEFINLAT   76 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~---~~~~~~-~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~   76 (99)
                      +++|+++|..  .+|+++++.| +|||.+++.+......   +..+.. ........  ..... ++..++..++.++|+
T Consensus       113 ~~l~~~~~~~--~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~l~~~l~  186 (276)
T 3mgg_A          113 FVLEHLQSPE--EALKSLKKVL-KPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR--VQAYM-KGNSLVGRQIYPLLQ  186 (276)
T ss_dssp             SCGGGCSCHH--HHHHHHHHHE-EEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH--HHHHT-TCCTTGGGGHHHHHH
T ss_pred             chhhhcCCHH--HHHHHHHHHc-CCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH--HHHhc-CCCcchHHHHHHHHH
Confidence            3688888854  8999999999 9999999998643211   111111 11111111  12222 667788899999999


Q ss_pred             HcCCCeeEEEEc
Q 037161           77 AAGFSGIRFQCF   88 (99)
Q Consensus        77 ~aGf~~~~~~~~   88 (99)
                      +|||+++++...
T Consensus       187 ~aGf~~v~~~~~  198 (276)
T 3mgg_A          187 ESGFEKIRVEPR  198 (276)
T ss_dssp             HTTCEEEEEEEE
T ss_pred             HCCCCeEEEeeE
Confidence            999999998754

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=98.34  E-value=6.7e-07  Score=58.72  Aligned_cols=76  Identities=12%  Similarity=0.082  Sum_probs=54.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|+++|  ..++|+++++.| +|||++++.+......+....   .   ... ... ......+|.++|.++++++||+
T Consensus       112 ~~~~~~~--~~~~l~~~~r~L-kpgG~l~~~~~~~~~~~~~~~---~---~~~-~~~-~~~~~~~~~~~~~~~l~~aGf~  180 (256)
T 1nkv_A          112 ATWIAGG--FAGAEELLAQSL-KPGGIMLIGEPYWRQLPATEE---I---AQA-CGV-SSTSDFLTLPGLVGAFDDLGYD  180 (256)
T ss_dssp             CGGGTSS--SHHHHHHHTTSE-EEEEEEEEEEEEETTCCSSHH---H---HHT-TTC-SCGGGSCCHHHHHHHHHTTTBC
T ss_pred             ChHhcCC--HHHHHHHHHHHc-CCCeEEEEecCcccCCCChHH---H---HHH-Hhc-ccccccCCHHHHHHHHHHCCCe
Confidence            5788876  688999999999 999999999987654432211   1   110 111 1134678999999999999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      ++++...
T Consensus       181 ~~~~~~~  187 (256)
T 1nkv_A          181 VVEMVLA  187 (256)
T ss_dssp             CCEEEEC
T ss_pred             eEEEEeC
Confidence            9887653

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=98.34  E-value=1.1e-06  Score=57.09  Aligned_cols=77  Identities=16%  Similarity=0.072  Sum_probs=53.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+++|  ..++|+++++.| +|||+++|.+........   .......+    -. ......++..++.++++++||
T Consensus       124 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~i~~~~~~~~~~---~~~~~~~~----~~-~~~~~~~~~~~~~~~l~~~Gf  192 (242)
T 3l8d_A          124 NSLEWTEE--PLRALNEIKRVL-KSDGYACIAILGPTAKPR---ENSYPRLY----GK-DVVCNTMMPWEFEQLVKEQGF  192 (242)
T ss_dssp             SCTTSSSC--HHHHHHHHHHHE-EEEEEEEEEEECTTCGGG---GGGGGGGG----TC-CCSSCCCCHHHHHHHHHHTTE
T ss_pred             ChHhhccC--HHHHHHHHHHHh-CCCeEEEEEEcCCcchhh---hhhhhhhc----cc-cccccCCCHHHHHHHHHHcCC
Confidence            36788876  458899999999 999999998854332211   01111111    11 124567899999999999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      ++++...+
T Consensus       193 ~~~~~~~~  200 (242)
T 3l8d_A          193 KVVDGIGV  200 (242)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEeecc
Confidence            99998754

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=98.31  E-value=8.8e-07  Score=56.78  Aligned_cols=79  Identities=15%  Similarity=0.114  Sum_probs=50.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhc-----CCCceecCHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH-----SPRGKVRTKHEFINLAT   76 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~-----~~~g~~rt~~e~~~ll~   76 (99)
                      ++| ++|  ..++|+++++.| +|||+++|.+.............   ..........     ......+|.++|.++|+
T Consensus       125 ~l~-~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (227)
T 3e8s_A          125 ALL-HQD--IIELLSAMRTLL-VPGGALVIQTLHPWSVADGDYQD---GWREESFAGFAGDWQPMPWYFRTLASWLNALD  197 (227)
T ss_dssp             CCC-SSC--CHHHHHHHHHTE-EEEEEEEEEECCTTTTCTTCCSC---EEEEECCTTSSSCCCCEEEEECCHHHHHHHHH
T ss_pred             hhh-hhh--HHHHHHHHHHHh-CCCeEEEEEecCccccCcccccc---ccchhhhhccccCcccceEEEecHHHHHHHHH
Confidence            466 444  568999999999 99999999886543322111000   0000000000     00235679999999999


Q ss_pred             HcCCCeeEEEE
Q 037161           77 AAGFSGIRFQC   87 (99)
Q Consensus        77 ~aGf~~~~~~~   87 (99)
                      +|||+++++..
T Consensus       198 ~aGf~~~~~~~  208 (227)
T 3e8s_A          198 MAGLRLVSLQE  208 (227)
T ss_dssp             HTTEEEEEEEC
T ss_pred             HcCCeEEEEec
Confidence            99999999875

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=98.29  E-value=1.9e-06  Score=58.59  Aligned_cols=76  Identities=11%  Similarity=0.093  Sum_probs=54.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.++   ..++|+++++.| +|||++++.+...++..... . .....++-  ..   ....+|.++|.++++++||+
T Consensus       194 ~l~~~~---~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~-~-~~~~~~~~--~~---~~~~~s~~~~~~~l~~aGf~  262 (312)
T 3vc1_A          194 STMYVD---LHDLFSEHSRFL-KVGGRYVTITGCWNPRYGQP-S-KWVSQINA--HF---ECNIHSRREYLRAMADNRLV  262 (312)
T ss_dssp             CGGGSC---HHHHHHHHHHHE-EEEEEEEEEEEEECTTTCSC-C-HHHHHHHH--HH---TCCCCBHHHHHHHHHTTTEE
T ss_pred             chhhCC---HHHHHHHHHHHc-CCCcEEEEEEccccccccch-h-HHHHHHHh--hh---cCCCCCHHHHHHHHHHCCCE
Confidence            577773   889999999999 99999999998776543221 1 11111111  11   12478899999999999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      ++++..+
T Consensus       263 ~~~~~~~  269 (312)
T 3vc1_A          263 PHTIVDL  269 (312)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            9998875

>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A

Probab=98.26  E-value=1.8e-06  Score=56.04  Aligned_cols=78  Identities=15%  Similarity=0.139  Sum_probs=53.0

Q ss_pred             CccccCChHHHHHHHHHHH-HhccCCCceEEEEeeecCCCCCCchhhhhhh----------hhchHhhhcCCCceecCHH
Q 037161            1 SILHAWSDEHCLKLLKNCY-ESINKEDGKLIVVEAVLPELPENSATSKANS----------QIDVFMLTHSPRGKVRTKH   69 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~-~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~----------~~dl~m~~~~~~g~~rt~~   69 (99)
                      ++||+++|.  .++|++++ +.| +|||+++|.+......     ......          ..+.. .. ..+.+.+|.+
T Consensus       111 ~~l~~~~~~--~~~l~~~~~~~L-kpgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~  180 (250)
T 2p7i_A          111 HVLEHIDDP--VALLKRINDDWL-AEGGRLFLVCPNANAV-----SRQIAVKMGIISHNSAVTEAE-FA-HGHRCTYALD  180 (250)
T ss_dssp             SCGGGCSSH--HHHHHHHHHTTE-EEEEEEEEEEECTTCH-----HHHHHHHTTSSSSTTCCCHHH-HH-TTCCCCCCHH
T ss_pred             hHHHhhcCH--HHHHHHHHHHhc-CCCCEEEEEcCChHHH-----HHHHHHHcCccccchhccccc-cc-ccccccCCHH
Confidence            478888874  69999999 999 9999999977432210     000000          00000 01 1245778999


Q ss_pred             HHHHHHHHcCCCeeEEEEc
Q 037161           70 EFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        70 e~~~ll~~aGf~~~~~~~~   88 (99)
                      ++.++|+++||+++++...
T Consensus       181 ~~~~~l~~~Gf~~~~~~~~  199 (250)
T 2p7i_A          181 TLERDASRAGLQVTYRSGI  199 (250)
T ss_dssp             HHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHCCCeEEEEeee
Confidence            9999999999999998754

>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*

Probab=98.22  E-value=3.1e-06  Score=57.01  Aligned_cols=75  Identities=9%  Similarity=0.087  Sum_probs=50.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh--hhcCCCceecCHHHHHHHHHHc
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM--LTHSPRGKVRTKHEFINLATAA   78 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m--~~~~~~g~~rt~~e~~~ll~~a   78 (99)
                      ++||+++|  -.+.|+++++.| +|||+++|.+.. ++   ....    ..+.-..  +........++.++|.++|+++
T Consensus       143 ~~l~~~~d--~~~~l~~~~r~L-kpgG~l~i~~~~-~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a  211 (292)
T 2aot_A          143 QMLYYVKD--IPATLKFFHSLL-GTNAKMLIIVVS-GS---SGWD----KLWKKYGSRFPQDDLCQYITSDDLTQMLDNL  211 (292)
T ss_dssp             SCGGGCSC--HHHHHHHHHHTE-EEEEEEEEEEEC-TT---SHHH----HHHHHHGGGSCCCTTCCCCCHHHHHHHHHHH
T ss_pred             eeeeecCC--HHHHHHHHHHHc-CCCcEEEEEEec-CC---ccHH----HHHHHHHHhccCCCcccCCCHHHHHHHHHHC
Confidence            47999998  467899999999 999999998643 11   1111    1111100  1000123568899999999999


Q ss_pred             CCCeeEEE
Q 037161           79 GFSGIRFQ   86 (99)
Q Consensus        79 Gf~~~~~~   86 (99)
                      ||+++...
T Consensus       212 Gf~~~~~~  219 (292)
T 2aot_A          212 GLKYECYD  219 (292)
T ss_dssp             TCCEEEEE
T ss_pred             CCceEEEE
Confidence            99988743

>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41

Probab=98.21  E-value=3.1e-06  Score=54.63  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=52.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|.+++  ..++|+++++.| +|||++++.+...+    .. ............. .......+|.++|.++|+++||
T Consensus       110 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~i~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~Gf  180 (219)
T 1vlm_A          110 TTICFVDD--PERALKEAYRIL-KKGGYLIVGIVDRE----SF-LGREYEKNKEKSV-FYKNARFFSTEELMDLMRKAGF  180 (219)
T ss_dssp             SCGGGSSC--HHHHHHHHHHHE-EEEEEEEEEEECSS----SH-HHHHHHHTTTC-C-CSTTCCCCCHHHHHHHHHHTTC
T ss_pred             chHhhccC--HHHHHHHHHHHc-CCCcEEEEEEeCCc----cH-HHHHHHHHhcCcc-hhcccccCCHHHHHHHHHHCCC
Confidence            36777766  468999999999 99999999875321    11 1110000000000 1124567899999999999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      +++++...
T Consensus       181 ~~~~~~~~  188 (219)
T 1vlm_A          181 EEFKVVQT  188 (219)
T ss_dssp             EEEEEEEE
T ss_pred             eEEEEecc
Confidence            99998764

>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}

Probab=98.17  E-value=7.1e-06  Score=54.36  Aligned_cols=84  Identities=8%  Similarity=0.002  Sum_probs=52.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhh-hhhhchHh--hh---cCCCceecCHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKA-NSQIDVFM--LT---HSPRGKVRTKHEFINL   74 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~-~~~~dl~m--~~---~~~~g~~rt~~e~~~l   74 (99)
                      +++|++++...  +++.++..+ +|||++++.+...+...... .... .....-.+  ..   .......+|.+++.++
T Consensus       130 ~~l~~~~~~~~--~~~~~~~l~-~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~  205 (275)
T 3bkx_A          130 HSLWYFASANA--LALLFKNMA-AVCDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQI  205 (275)
T ss_dssp             SCGGGSSCHHH--HHHHHHHHT-TTCSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHH
T ss_pred             cchhhCCCHHH--HHHHHHHHh-CCCCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhccccccccccccCCHHHHHHH
Confidence            36788888653  666666666 88999999998776542211 1000 00110000  00   0101246899999999


Q ss_pred             HHHcCCCeeEEEEc
Q 037161           75 ATAAGFSGIRFQCF   88 (99)
Q Consensus        75 l~~aGf~~~~~~~~   88 (99)
                      ++++||+++++..+
T Consensus       206 l~~aGf~~~~~~~~  219 (275)
T 3bkx_A          206 AHDNTWTYTAGTIV  219 (275)
T ss_dssp             HHHHTCEEEECCCB
T ss_pred             HHHCCCeeEEEEEe
Confidence            99999999988765

>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A

Probab=98.16  E-value=6e-06  Score=51.50  Aligned_cols=61  Identities=16%  Similarity=0.199  Sum_probs=44.4

Q ss_pred             ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++|.. +|  ..++|+++++.| +|||++++.+.......            +        ....|+.++|.++|+++||
T Consensus        72 ~l~~~~~~--~~~~l~~~~r~L-kpgG~l~~~~~~~~~~~------------~--------~~~~~~~~~~~~~l~~aGf  128 (176)
T 2ld4_A           72 VPGSTTLH--SAEILAEIARIL-RPGGCLFLKEPVETAVD------------N--------NSKVKTASKLCSALTLSGL  128 (176)
T ss_dssp             STTCCCCC--CHHHHHHHHHHE-EEEEEEEEEEEEESSSC------------S--------SSSSCCHHHHHHHHHHTTC
T ss_pred             hhhhcccC--HHHHHHHHHHHC-CCCEEEEEEcccccccc------------c--------ccccCCHHHHHHHHHHCCC
Confidence            67777 55  478999999999 99999999665432210            0        1234689999999999999


Q ss_pred             CeeEEEE
Q 037161           81 SGIRFQC   87 (99)
Q Consensus        81 ~~~~~~~   87 (99)
                       +. +..
T Consensus       129 -i~-~~~  133 (176)
T 2ld4_A          129 -VE-VKE  133 (176)
T ss_dssp             -EE-EEE
T ss_pred             -cE-eec
Confidence             44 443

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=98.15  E-value=2e-05  Score=51.10  Aligned_cols=85  Identities=14%  Similarity=0.145  Sum_probs=51.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC--CCCCCchh----h----hhhhhh-----chHhhhcCCCcee
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP--ELPENSAT----S----KANSQI-----DVFMLTHSPRGKV   65 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~--~~~~~~~~----~----~~~~~~-----dl~m~~~~~~g~~   65 (99)
                      +++|++++  ..++|+++++.| +|||++++......  ........    .    .....+     ....+........
T Consensus       115 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (243)
T 3bkw_A          115 LALHYVED--VARLFRTVHQAL-SPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHH  191 (243)
T ss_dssp             SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEE
T ss_pred             ccccccch--HHHHHHHHHHhc-CcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEe
Confidence            36788876  678999999999 99999999764211  00000000    0    000000     0000110113445


Q ss_pred             cCHHHHHHHHHHcCCCeeEEEEc
Q 037161           66 RTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        66 rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      +|.++|.++|++|||+++++...
T Consensus       192 ~t~~~~~~~l~~aGF~~~~~~~~  214 (243)
T 3bkw_A          192 RTVGTTLNALIRSGFAIEHVEEF  214 (243)
T ss_dssp             CCHHHHHHHHHHTTCEEEEEEEC
T ss_pred             ccHHHHHHHHHHcCCEeeeeccC
Confidence            79999999999999999998754

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=98.15  E-value=5.3e-06  Score=54.40  Aligned_cols=75  Identities=13%  Similarity=0.093  Sum_probs=53.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|+++   ..++|+++++.| +|||++++.+..........      ...+...-.   ....+|.++|.++++++||+
T Consensus       123 ~l~~~~---~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~l~~aGf~  189 (257)
T 3f4k_A          123 AIYNIG---FERGMNEWSKYL-KKGGFIAVSEASWFTSERPA------EIEDFWMDA---YPEISVIPTCIDKMERAGYT  189 (257)
T ss_dssp             CSCCCC---HHHHHHHHHTTE-EEEEEEEEEEEEESSSCCCH------HHHHHHHHH---CTTCCBHHHHHHHHHHTTEE
T ss_pred             hHhhcC---HHHHHHHHHHHc-CCCcEEEEEEeeccCCCChH------HHHHHHHHh---CCCCCCHHHHHHHHHHCCCe
Confidence            567773   467999999999 99999999997644432221      111211111   23367899999999999999


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      ++.+...+
T Consensus       190 ~v~~~~~~  197 (257)
T 3f4k_A          190 PTAHFILP  197 (257)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEECC
Confidence            99987664

>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}

Probab=98.08  E-value=7e-06  Score=54.85  Aligned_cols=83  Identities=12%  Similarity=0.074  Sum_probs=53.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhh-------cCCCceecCHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT-------HSPRGKVRTKHEFIN   73 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~-------~~~~g~~rt~~e~~~   73 (99)
                      +++|+++|.  .++|+++++.| +|||++++.+...+.....   ......++...-.       .......+|.+++.+
T Consensus       144 ~~l~~~~~~--~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  217 (285)
T 4htf_A          144 AVLEWVADP--RSVLQTLWSVL-RPGGVLSLMFYNAHGLLMH---NMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYL  217 (285)
T ss_dssp             SCGGGCSCH--HHHHHHHHHTE-EEEEEEEEEEEBHHHHHHH---HHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHH
T ss_pred             chhhcccCH--HHHHHHHHHHc-CCCeEEEEEEeCCchHHHH---HHHhcCHHHHhhhccccccccCCCCCCCCHHHHHH
Confidence            367888774  68999999999 9999999987643221000   0000000110000       011346789999999


Q ss_pred             HHHHcCCCeeEEEEcC
Q 037161           74 LATAAGFSGIRFQCFV   89 (99)
Q Consensus        74 ll~~aGf~~~~~~~~~   89 (99)
                      +|+++||+++++..+.
T Consensus       218 ~l~~aGf~v~~~~~~~  233 (285)
T 4htf_A          218 WLEEAGWQIMGKTGVR  233 (285)
T ss_dssp             HHHHTTCEEEEEEEES
T ss_pred             HHHHCCCceeeeeeEE
Confidence            9999999999988764

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=98.06  E-value=1.5e-05  Score=49.72  Aligned_cols=59  Identities=14%  Similarity=0.157  Sum_probs=48.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|..++++..++|+++++.| +|||++++....                           ...++.+++.++++++||+
T Consensus       117 ~~~~~~~~~~~~~l~~~~~~l-~~~G~l~~~~~~---------------------------~~~~~~~~~~~~l~~~Gf~  168 (195)
T 3cgg_A          117 VMGFLAEDGREPALANIHRAL-GADGRAVIGFGA---------------------------GRGWVFGDFLEVAERVGLE  168 (195)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEET---------------------------TSSCCHHHHHHHHHHHTEE
T ss_pred             HHhhcChHHHHHHHHHHHHHh-CCCCEEEEEeCC---------------------------CCCcCHHHHHHHHHHcCCE
Confidence            577888888999999999999 999999885321                           1126789999999999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      ++++...
T Consensus       169 ~~~~~~~  175 (195)
T 3cgg_A          169 LENAFES  175 (195)
T ss_dssp             EEEEESS
T ss_pred             Eeeeecc
Confidence            9988644

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=98.03  E-value=4.4e-06  Score=54.84  Aligned_cols=85  Identities=16%  Similarity=0.121  Sum_probs=50.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC-----------CCCCCchhhhhhhhhc-----hHhhhcCCCce
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP-----------ELPENSATSKANSQID-----VFMLTHSPRGK   64 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~-----------~~~~~~~~~~~~~~~d-----l~m~~~~~~g~   64 (99)
                      +++|+++|  ..++|+++++.| +|||++++......           +.............++     ...........
T Consensus       116 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (253)
T 3g5l_A          116 LALHYIAS--FDDICKKVYINL-KSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKY  192 (253)
T ss_dssp             SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEE
T ss_pred             hhhhhhhh--HHHHHHHHHHHc-CCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccE
Confidence            36788866  679999999999 99999998643211           0000000000000000     00000000123


Q ss_pred             ecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           65 VRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        65 ~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      .||.++|.++|++|||+++++...
T Consensus       193 ~~t~~~~~~~l~~aGF~~~~~~e~  216 (253)
T 3g5l_A          193 HRTVTTYIQTLLKNGFQINSVIEP  216 (253)
T ss_dssp             CCCHHHHHHHHHHTTEEEEEEECC
T ss_pred             ecCHHHHHHHHHHcCCeeeeeecC
Confidence            359999999999999999998854

>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}

Probab=98.03  E-value=1.2e-05  Score=52.44  Aligned_cols=82  Identities=11%  Similarity=0.016  Sum_probs=53.4

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhh-----hhchH-hhhcCCCceecCHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS-----QIDVF-MLTHSPRGKVRTKHEFINL   74 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~-----~~dl~-m~~~~~~g~~rt~~e~~~l   74 (99)
                      +++|..++++..++|+++++.| +|||+++|.|...++..   .......     ...+. .+........++.+++.++
T Consensus       132 ~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (245)
T 3ggd_A          132 TGFHHIPVEKRELLGQSLRILL-GKQGAMYLIELGTGCID---FFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELY  207 (245)
T ss_dssp             SSSTTSCGGGHHHHHHHHHHHH-TTTCEEEEEEECTTHHH---HHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHH
T ss_pred             chhhcCCHHHHHHHHHHHHHHc-CCCCEEEEEeCCccccH---HHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHH
Confidence            3688999888999999999999 99999999998644310   0000000     00000 0111112234799999999


Q ss_pred             HHHcCCCeeEEEEc
Q 037161           75 ATAAGFSGIRFQCF   88 (99)
Q Consensus        75 l~~aGf~~~~~~~~   88 (99)
                      |  +||+++....+
T Consensus       208 ~--aGf~~~~~~~~  219 (245)
T 3ggd_A          208 F--PDFEILSQGEG  219 (245)
T ss_dssp             C--TTEEEEEEECC
T ss_pred             h--CCCEEEecccc
Confidence            9  99999886543

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=98.03  E-value=1.3e-05  Score=56.49  Aligned_cols=76  Identities=12%  Similarity=0.122  Sum_probs=54.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++||+++|  ...+|+++++.| +|||++++........         .....+..... .+...+|.++|.++++++||
T Consensus       179 ~vl~h~~d--~~~~l~~~~r~L-kpgG~l~i~~~~~~~~---------~~~~~~~~~~~-~~~~~~s~~~l~~ll~~aGf  245 (416)
T 4e2x_A          179 NTLCHIPY--VQSVLEGVDALL-APDGVFVFEDPYLGDI---------VAKTSFDQIFD-EHFFLFSATSVQGMAQRCGF  245 (416)
T ss_dssp             SCGGGCTT--HHHHHHHHHHHE-EEEEEEEEEEECHHHH---------HHHTCGGGCST-TCCEECCHHHHHHHHHHTTE
T ss_pred             ChHHhcCC--HHHHHHHHHHHc-CCCeEEEEEeCChHHh---------hhhcchhhhhh-hhhhcCCHHHHHHHHHHcCC
Confidence            47899986  789999999999 9999999865432211         00011111111 36678999999999999999


Q ss_pred             CeeEEEEcC
Q 037161           81 SGIRFQCFV   89 (99)
Q Consensus        81 ~~~~~~~~~   89 (99)
                      +++++...+
T Consensus       246 ~~~~~~~~~  254 (416)
T 4e2x_A          246 ELVDVQRLP  254 (416)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEEEEcc
Confidence            999998764

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=98.02  E-value=8.7e-06  Score=53.93  Aligned_cols=75  Identities=15%  Similarity=0.076  Sum_probs=53.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.+ +  -.++|+++++.| +|||++++.+..........      ...+...-  . ....+|.+++.++++++||+
T Consensus       123 ~~~~~-~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~------~~~~~~~~--~-~~~~~~~~~~~~~l~~aGf~  189 (267)
T 3kkz_A          123 AIYNI-G--FERGLNEWRKYL-KKGGYLAVSECSWFTDERPA------EINDFWMD--A-YPEIDTIPNQVAKIHKAGYL  189 (267)
T ss_dssp             CGGGT-C--HHHHHHHHGGGE-EEEEEEEEEEEEESSSCCCH------HHHHHHHH--H-CTTCEEHHHHHHHHHHTTEE
T ss_pred             Cceec-C--HHHHHHHHHHHc-CCCCEEEEEEeeecCCCChH------HHHHHHHH--h-CCCCCCHHHHHHHHHHCCCE
Confidence            56777 3  467899999999 99999999998755443221      11111111  1 23567899999999999999


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      ++++..++
T Consensus       190 ~v~~~~~~  197 (267)
T 3kkz_A          190 PVATFILP  197 (267)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEECC
Confidence            99998765

>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*

Probab=98.00  E-value=1.4e-05  Score=50.23  Aligned_cols=68  Identities=12%  Similarity=0.054  Sum_probs=52.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|.+++++..++|+++++.| +|||++++++...++....+                ......++.+++.++|++  |
T Consensus       105 ~~l~~~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~--f  165 (199)
T 2xvm_A          105 VVLMFLEAKTIPGLIANMQRCT-KPGGYNLIVAAMDTADYPCT----------------VGFPFAFKEGELRRYYEG--W  165 (199)
T ss_dssp             SCGGGSCGGGHHHHHHHHHHTE-EEEEEEEEEEEBCCSSSCCC----------------SCCSCCBCTTHHHHHTTT--S
T ss_pred             chhhhCCHHHHHHHHHHHHHhc-CCCeEEEEEEeeccCCcCCC----------------CCCCCccCHHHHHHHhcC--C
Confidence            3688899888999999999999 99999999888755432110                013345688899999987  9


Q ss_pred             CeeEEEE
Q 037161           81 SGIRFQC   87 (99)
Q Consensus        81 ~~~~~~~   87 (99)
                      ++++...
T Consensus       166 ~~~~~~~  172 (199)
T 2xvm_A          166 ERVKYNE  172 (199)
T ss_dssp             EEEEEEC
T ss_pred             eEEEecc
Confidence            9988754

>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}

Probab=97.98  E-value=2.7e-06  Score=54.59  Aligned_cols=79  Identities=15%  Similarity=0.194  Sum_probs=52.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhc-------hHhhhcCCCceecCHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQID-------VFMLTHSPRGKVRTKHEFIN   73 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~d-------l~m~~~~~~g~~rt~~e~~~   73 (99)
                      +++|++++.  .++|+++++.| +|||++++........   .   .......       ...... ...+.+|.++|.+
T Consensus       101 ~~l~~~~~~--~~~l~~~~~~L-~~gG~l~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  170 (230)
T 3cc8_A          101 DVLEHLFDP--WAVIEKVKPYI-KQNGVILASIPNVSHI---S---VLAPLLAGNWTYTEYGLLDK-THIRFFTFNEMLR  170 (230)
T ss_dssp             SCGGGSSCH--HHHHHHTGGGE-EEEEEEEEEEECTTSH---H---HHHHHHTTCCCCBSSSTTBT-TCCCCCCHHHHHH
T ss_pred             ChhhhcCCH--HHHHHHHHHHc-CCCCEEEEEeCCcchH---H---HHHHHhcCCceeccCCCCCc-ceEEEecHHHHHH
Confidence            367888775  58999999999 9999999976432210   0   0000000       000011 1336689999999


Q ss_pred             HHHHcCCCeeEEEEcC
Q 037161           74 LATAAGFSGIRFQCFV   89 (99)
Q Consensus        74 ll~~aGf~~~~~~~~~   89 (99)
                      +++++||+++++....
T Consensus       171 ~l~~~Gf~~~~~~~~~  186 (230)
T 3cc8_A          171 MFLKAGYSISKVDRVY  186 (230)
T ss_dssp             HHHHTTEEEEEEEEEE
T ss_pred             HHHHcCCeEEEEEecc
Confidence            9999999999988753

>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}

Probab=97.93  E-value=2.1e-05  Score=52.12  Aligned_cols=77  Identities=10%  Similarity=0.075  Sum_probs=51.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+++|  ..++|+++++.| + ||++++.+...+...... .   ...+.. +.... +...++.+++. +|++|||
T Consensus       102 ~~l~~~~~--~~~~l~~~~~~L-k-gG~~~~~~~~~~~~~~~~-~---~~~~~~-~~~~~-~~~~~~~~~~~-~l~~aGF  170 (261)
T 3ege_A          102 LAIHHFSH--LEKSFQEMQRII-R-DGTIVLLTFDIRLAQRIW-L---YDYFPF-LWEDA-LRFLPLDEQIN-LLQENTK  170 (261)
T ss_dssp             SCGGGCSS--HHHHHHHHHHHB-C-SSCEEEEEECGGGCCCCG-G---GGTCHH-HHHHH-HTSCCHHHHHH-HHHHHHC
T ss_pred             chHhhccC--HHHHHHHHHHHh-C-CcEEEEEEcCCchhHHHH-H---HHHHHH-Hhhhh-hhhCCCHHHHH-HHHHcCC
Confidence            36888866  678999999999 9 999999997543322111 0   011111 11111 24456778889 9999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      +.+++...
T Consensus       171 ~~v~~~~~  178 (261)
T 3ege_A          171 RRVEAIPF  178 (261)
T ss_dssp             SEEEEEEC
T ss_pred             CceeEEEe
Confidence            99998765

>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*

Probab=97.92  E-value=2.1e-05  Score=53.48  Aligned_cols=74  Identities=15%  Similarity=0.192  Sum_probs=52.2

Q ss_pred             ccccCChHH-HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSDEH-CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d~~-~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +||..+|++ ...+|++++++| +|||.|++.+...+..+  .   ....+.+..-.... ....||.+|+.++|.  ||
T Consensus       169 vLH~l~d~~~p~~~l~~l~~~L-~PGG~Lvls~~~~d~~p--~---~~~~~~~~~~~~g~-p~~~rs~~ei~~~f~--Gl  239 (277)
T 3giw_A          169 IVHFVLDEDDAVGIVRRLLEPL-PSGSYLAMSIGTAEFAP--Q---EVGRVAREYAARNM-PMRLRTHAEAEEFFE--GL  239 (277)
T ss_dssp             CGGGSCGGGCHHHHHHHHHTTS-CTTCEEEEEEECCTTSH--H---HHHHHHHHHHHTTC-CCCCCCHHHHHHTTT--TS
T ss_pred             hHhcCCchhhHHHHHHHHHHhC-CCCcEEEEEeccCCCCH--H---HHHHHHHHHHhcCC-CCccCCHHHHHHHhC--CC
Confidence            689898877 689999999999 99999999887654221  1   11122232222222 356799999999995  99


Q ss_pred             CeeE
Q 037161           81 SGIR   84 (99)
Q Consensus        81 ~~~~   84 (99)
                      ++++
T Consensus       240 elve  243 (277)
T 3giw_A          240 ELVE  243 (277)
T ss_dssp             EECT
T ss_pred             cccC
Confidence            9765

>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A

Probab=97.90  E-value=9.7e-06  Score=54.38  Aligned_cols=81  Identities=14%  Similarity=0.131  Sum_probs=51.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeee-----cC---CCCCCch---hhhhhhhhchHhhhcCCCceecCHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV-----LP---ELPENSA---TSKANSQIDVFMLTHSPRGKVRTKHE   70 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~-----~~---~~~~~~~---~~~~~~~~dl~m~~~~~~g~~rt~~e   70 (99)
                      ++|.++|.  .++|+++++.| +|||.+++.+..     ..   ++...+.   .......+.-. .... +....+..+
T Consensus        98 ~l~~~~~~--~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~  172 (284)
T 3gu3_A           98 FLLHMTTP--ETMLQKMIHSV-KKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESD-TQRN-GKDGNIGMK  172 (284)
T ss_dssp             CGGGCSSH--HHHHHHHHHTE-EEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHH-HHHT-CCCTTGGGT
T ss_pred             hhhcCCCH--HHHHHHHHHHc-CCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHH-hhhh-cccccHHHH
Confidence            67888774  59999999999 999999999865     11   1111100   00111111111 1122 455667789


Q ss_pred             HHHHHHHcCCCeeEEEE
Q 037161           71 FINLATAAGFSGIRFQC   87 (99)
Q Consensus        71 ~~~ll~~aGf~~~~~~~   87 (99)
                      +.++|++|||+.+++..
T Consensus       173 l~~~l~~aGF~~v~~~~  189 (284)
T 3gu3_A          173 IPIYLSELGVKNIECRV  189 (284)
T ss_dssp             HHHHHHHTTCEEEEEEE
T ss_pred             HHHHHHHcCCCeEEEEE
Confidence            99999999999998743

>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}

Probab=97.90  E-value=6.2e-06  Score=52.45  Aligned_cols=84  Identities=5%  Similarity=-0.116  Sum_probs=54.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|+++.++..++|+++++.| +|||++++.+...++.+...........+....-.....+..+|.+|+.++|+.+||.
T Consensus        98 ~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~  176 (209)
T 2p8j_A           98 TIFHMRKNDVKEAIDEIKRVL-KPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVL  176 (209)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEE
T ss_pred             hHHhCCHHHHHHHHHHHHHHc-CCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCce
Confidence            688898889999999999999 9999999998876543211000000000000000000023677999999999999987


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      ..+..
T Consensus       177 ~~~~~  181 (209)
T 2p8j_A          177 FKEDR  181 (209)
T ss_dssp             EEEEE
T ss_pred             eeeee
Confidence            76554

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=97.84  E-value=2.3e-05  Score=51.34  Aligned_cols=79  Identities=13%  Similarity=0.025  Sum_probs=48.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCC---CceecCHHHHHHHHHHc
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP---RGKVRTKHEFINLATAA   78 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~---~g~~rt~~e~~~ll~~a   78 (99)
                      ++|.++|  ..++|+++++.| +|||++++. .. +.+ ..+.......+..+.-.....   ....++.+++.++|+++
T Consensus       113 ~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  186 (263)
T 2yqz_A          113 LWHLVPD--WPKVLAEAIRVL-KPGGALLEG-WD-QAE-ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRL  186 (263)
T ss_dssp             CGGGCTT--HHHHHHHHHHHE-EEEEEEEEE-EE-EEC-CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred             chhhcCC--HHHHHHHHHHHC-CCCcEEEEE-ec-CCC-ccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHc
Confidence            6788876  568999999999 999999987 22 211 111000000111111111010   23467889999999999


Q ss_pred             CCCeeEEE
Q 037161           79 GFSGIRFQ   86 (99)
Q Consensus        79 Gf~~~~~~   86 (99)
                      ||+++.+.
T Consensus       187 Gf~~~~~~  194 (263)
T 2yqz_A          187 GLKPRTRE  194 (263)
T ss_dssp             TCCCEEEE
T ss_pred             CCCcceEE
Confidence            99987664

>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A

Probab=97.83  E-value=4.1e-05  Score=49.08  Aligned_cols=75  Identities=8%  Similarity=0.016  Sum_probs=47.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHH----HHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFI----NLAT   76 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~----~ll~   76 (99)
                      +++|++++++..++|+++++.| +|||.+++........       .+..+.... +........+|.+++.    ++++
T Consensus       110 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~li~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~  180 (217)
T 3jwh_A          110 EVIEHLDLSRLGAFERVLFEFA-QPKIVIVTTPNIEYNV-------KFANLPAGK-LRHKDHRFEWTRSQFQNWANKITE  180 (217)
T ss_dssp             SCGGGCCHHHHHHHHHHHHTTT-CCSEEEEEEEBHHHHH-------HTC------------CCSCBCHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHHc-CCCEEEEEccCcccch-------hhccccccc-ccccccccccCHHHHHHHHHHHHH
Confidence            4789999999999999999999 9999666655421000       000000000 1111245567999999    8899


Q ss_pred             HcCCCeeE
Q 037161           77 AAGFSGIR   84 (99)
Q Consensus        77 ~aGf~~~~   84 (99)
                      ++||++.-
T Consensus       181 ~~Gf~v~~  188 (217)
T 3jwh_A          181 RFAYNVQF  188 (217)
T ss_dssp             HSSEEEEE
T ss_pred             HcCceEEE
Confidence            99997754

>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A

Probab=97.82  E-value=7.3e-05  Score=47.89  Aligned_cols=76  Identities=11%  Similarity=0.086  Sum_probs=47.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHH----HHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFI----NLAT   76 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~----~ll~   76 (99)
                      +++|++++++..++|+++++.| +|||.+++.........-+       .+....+.. .......|.+++.    ++++
T Consensus       110 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~~i~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~l~~~~~~l~~  180 (219)
T 3jwg_A          110 EVIEHLDENRLQAFEKVLFEFT-RPQTVIVSTPNKEYNFHYG-------NLFEGNLRH-RDHRFEWTRKEFQTWAVKVAE  180 (219)
T ss_dssp             SCGGGCCHHHHHHHHHHHHTTT-CCSEEEEEEEBGGGGGCCC-------CT-----GG-GCCTTSBCHHHHHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHHhh-CCCEEEEEccchhhhhhhc-------ccCcccccc-cCceeeecHHHHHHHHHHHHH
Confidence            4789999999999999999999 9999555544321100000       000000111 1244567899999    8899


Q ss_pred             HcCCCeeEE
Q 037161           77 AAGFSGIRF   85 (99)
Q Consensus        77 ~aGf~~~~~   85 (99)
                      ++||++.-.
T Consensus       181 ~~Gf~v~~~  189 (219)
T 3jwg_A          181 KYGYSVRFL  189 (219)
T ss_dssp             HHTEEEEEE
T ss_pred             HCCcEEEEE
Confidence            999966543

>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*

Probab=97.81  E-value=2.5e-05  Score=52.01  Aligned_cols=86  Identities=9%  Similarity=0.031  Sum_probs=52.5

Q ss_pred             cccc--CChHHHHHHHHHHHHhccCCCceEEEEeeecCCC---------CCCch---------hhh-hhhhhchHh--hh
Q 037161            2 ILHA--WSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL---------PENSA---------TSK-ANSQIDVFM--LT   58 (99)
Q Consensus         2 vlHd--w~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~---------~~~~~---------~~~-~~~~~dl~m--~~   58 (99)
                      ++|.  .+.++..++|+++++.| +|||++++.....+..         .....         ... ....+.+.+  ..
T Consensus       142 ~l~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~  220 (298)
T 1ri5_A          142 SFHYAFSTSESLDIAQRNIARHL-RPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSV  220 (298)
T ss_dssp             CGGGGGSSHHHHHHHHHHHHHTE-EEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSC
T ss_pred             hhhhhcCCHHHHHHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhh
Confidence            4666  67788999999999999 9999999876432100         00000         000 000000000  00


Q ss_pred             cCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           59 HSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        59 ~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      .......+|.+++.++++++||+++++..+
T Consensus       221 ~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~  250 (298)
T 1ri5_A          221 NNCIEYFVDFTRMVDGFKRLGLSLVERKGF  250 (298)
T ss_dssp             SSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred             cCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence            000135678999999999999999998765

>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15

Probab=97.80  E-value=2.9e-05  Score=51.57  Aligned_cols=65  Identities=17%  Similarity=0.041  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      ++-.++|+++++.| +|||++++.+..-+ .   . +     ...-.   .. .....|.+++.++|+++||+++++...
T Consensus       174 ~~~~~~l~~i~r~L-KPGG~li~~~~~~~-~---~-~-----~~g~~---~~-~~~~~~~~~l~~~l~~aGF~i~~~~~~  238 (263)
T 2a14_A          174 DAYRAALCNLASLL-KPGGHLVTTVTLRL-P---S-Y-----MVGKR---EF-SCVALEKGEVEQAVLDAGFDIEQLLHS  238 (263)
T ss_dssp             HHHHHHHHHHHTTE-EEEEEEEEEEESSC-C---E-E-----EETTE---EE-ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHc-CCCcEEEEEEeecC-c---c-c-----eeCCe---Ee-eccccCHHHHHHHHHHCCCEEEEEeec
Confidence            56788999999999 99999999875321 1   0 0     00000   00 112458999999999999999988764

>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*

Probab=97.80  E-value=2.9e-05  Score=50.90  Aligned_cols=66  Identities=15%  Similarity=0.086  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      ++..++|+++++.| +|||++++.+..-+ .   . ..    .-+.    .. .....+.+++.++|+++||+++++...
T Consensus       175 ~~~~~~l~~~~~~L-kpgG~li~~~~~~~-~---~-~~----~~~~----~~-~~~~~~~~~~~~~l~~aGf~~~~~~~~  239 (265)
T 2i62_A          175 PAYRTALRNLGSLL-KPGGFLVMVDALKS-S---Y-YM----IGEQ----KF-SSLPLGWETVRDAVEEAGYTIEQFEVI  239 (265)
T ss_dssp             HHHHHHHHHHHTTE-EEEEEEEEEEESSC-C---E-EE----ETTE----EE-ECCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHHHHhhC-CCCcEEEEEecCCC-c---e-EE----cCCc----cc-cccccCHHHHHHHHHHCCCEEEEEEEe
Confidence            36789999999999 99999999884322 1   0 00    0000    00 123467889999999999999998765


Q ss_pred             C
Q 037161           89 V   89 (99)
Q Consensus        89 ~   89 (99)
                      .
T Consensus       240 ~  240 (265)
T 2i62_A          240 S  240 (265)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=97.76  E-value=6.9e-05  Score=49.88  Aligned_cols=79  Identities=13%  Similarity=0.121  Sum_probs=49.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh-h-----hcCCCceecCHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM-L-----THSPRGKVRTKHEFINLA   75 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m-~-----~~~~~g~~rt~~e~~~ll   75 (99)
                      ++|.++|  ..++|+++++.| +|||++++.....+.  ....   ......... .     .....-..++.++|.++|
T Consensus       126 ~l~~~~d--~~~~l~~~~~~L-kpgG~l~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  197 (279)
T 3ccf_A          126 MLHWVKE--PEAAIASIHQAL-KSGGRFVAEFGGKGN--IKYI---LEALYNALETLGIHNPQALNPWYFPSIGEYVNIL  197 (279)
T ss_dssp             CGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECTTT--THHH---HHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHH
T ss_pred             hhhhCcC--HHHHHHHHHHhc-CCCcEEEEEecCCcc--hHHH---HHHHHHHHHhcCCccccCcCceeCCCHHHHHHHH
Confidence            5777776  458999999999 999999986643221  1110   001111100 0     000012456899999999


Q ss_pred             HHcCCCeeEEEEc
Q 037161           76 TAAGFSGIRFQCF   88 (99)
Q Consensus        76 ~~aGf~~~~~~~~   88 (99)
                      +++||+++++...
T Consensus       198 ~~aGf~~~~~~~~  210 (279)
T 3ccf_A          198 EKQGFDVTYAALF  210 (279)
T ss_dssp             HHHTEEEEEEEEE
T ss_pred             HHcCCEEEEEEEe
Confidence            9999999887654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=97.76  E-value=6.3e-05  Score=48.90  Aligned_cols=77  Identities=14%  Similarity=0.003  Sum_probs=49.8

Q ss_pred             ccccCChH-HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSDE-HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d~-~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |+|+.++. +...+|+++++.| +|||+++|. .........+..                  .....+++. +|+++||
T Consensus       147 v~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~-~~~~~~~~~~~~------------------~~~~~~~l~-~l~~~Gf  205 (230)
T 1fbn_A          147 IYEDVAQPNQAEILIKNAKWFL-KKGGYGMIA-IKARSIDVTKDP------------------KEIFKEQKE-ILEAGGF  205 (230)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHE-EEEEEEEEE-EEGGGTCSSSCH------------------HHHHHHHHH-HHHHHTE
T ss_pred             EEEecCChhHHHHHHHHHHHhC-CCCcEEEEE-EecCCCCCCCCH------------------HHhhHHHHH-HHHHCCC
Confidence            46776654 4466799999999 999999997 221111111000                  001126777 9999999


Q ss_pred             CeeEEEEcCCC---eeEEEEEC
Q 037161           81 SGIRFQCFVCN---SWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~---~~vie~~k   99 (99)
                      +.+++..+...   +.++.++|
T Consensus       206 ~~~~~~~~~~~~~~~~~v~~~k  227 (230)
T 1fbn_A          206 KIVDEVDIEPFEKDHVMFVGIW  227 (230)
T ss_dssp             EEEEEEECTTTSTTEEEEEEEE
T ss_pred             EEEEEEccCCCccceEEEEEEe
Confidence            99999887653   66666654

>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*

Probab=97.72  E-value=3.6e-05  Score=51.43  Aligned_cols=33  Identities=18%  Similarity=0.216  Sum_probs=28.8

Q ss_pred             CccccCCh-----HHHHHHHHHHHHhccCCCceEEEEee
Q 037161            1 SILHAWSD-----EHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         1 ~vlHdw~d-----~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      +++|++++     ++..++|+++++.| +|||++++...
T Consensus       139 ~~l~~~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~  176 (293)
T 3thr_A          139 NSFAHLPDSKGDQSEHRLALKNIASMV-RPGGLLVIDHR  176 (293)
T ss_dssp             TCGGGSCCSSSSSHHHHHHHHHHHHTE-EEEEEEEEEEE
T ss_pred             hHHhhcCccccCHHHHHHHHHHHHHHc-CCCeEEEEEeC
Confidence            36788887     88999999999999 99999998764

>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...

Probab=97.67  E-value=2.4e-05  Score=52.45  Aligned_cols=64  Identities=9%  Similarity=0.092  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      +-.++|+++++.| +|||++++.+..-. ..    ..    .-+-    .. ....+|.++|.++|+++||+++++...
T Consensus       193 ~~~~~l~~~~r~L-kpGG~l~~~~~~~~-~~----~~----~~~~----~~-~~~~~~~~~l~~~l~~aGf~~~~~~~~  256 (289)
T 2g72_A          193 SFQRALDHITTLL-RPGGHLLLIGALEE-SW----YL----AGEA----RL-TVVPVSEEEVREALVRSGYKVRDLRTY  256 (289)
T ss_dssp             HHHHHHHHHHTTE-EEEEEEEEEEEESC-CE----EE----ETTE----EE-ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHHHHHhc-CCCCEEEEEEecCc-ce----EE----cCCe----ee-eeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence            6789999999999 99999999864321 10    00    0000    00 123568999999999999999988754

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=97.67  E-value=0.0001  Score=47.16  Aligned_cols=68  Identities=1%  Similarity=-0.098  Sum_probs=48.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|..++++..+.++++++.| +|||+++++....+... .                 .......|.+|+.+++++ ||+
T Consensus       110 ~l~~l~~~~~~~~l~~~~r~L-kpgG~~~l~~~~~~~~~-~-----------------~~~~~~~~~~el~~~~~~-gf~  169 (203)
T 1pjz_A          110 AMIALPADMRERYVQHLEALM-PQACSGLLITLEYDQAL-L-----------------EGPPFSVPQTWLHRVMSG-NWE  169 (203)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHS-CSEEEEEEEEESSCSSS-S-----------------SSCCCCCCHHHHHHTSCS-SEE
T ss_pred             chhhCCHHHHHHHHHHHHHHc-CCCcEEEEEEEecCccc-c-----------------CCCCCCCCHHHHHHHhcC-CcE
Confidence            578888888889999999999 99999555543322110 0                 001123678999999999 999


Q ss_pred             eeEEEEcC
Q 037161           82 GIRFQCFV   89 (99)
Q Consensus        82 ~~~~~~~~   89 (99)
                      +..+....
T Consensus       170 i~~~~~~~  177 (203)
T 1pjz_A          170 VTKVGGQD  177 (203)
T ss_dssp             EEEEEESS
T ss_pred             EEEecccc
Confidence            88877653

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=97.53  E-value=0.00036  Score=43.98  Aligned_cols=69  Identities=9%  Similarity=0.036  Sum_probs=49.7

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI   83 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~   83 (99)
                      +.++.++..++|+++++.| +|||++++.+.......    .     ...   . .......+|.+++.++|+  ||+++
T Consensus       103 ~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~----~-----~~~---~-~~~~~~~~~~~~l~~~l~--Gf~v~  166 (202)
T 2kw5_A          103 CHLPSSLRQQLYPKVYQGL-KPGGVFILEGFAPEQLQ----Y-----NTG---G-PKDLDLLPKLETLQSELP--SLNWL  166 (202)
T ss_dssp             CCCCHHHHHHHHHHHHTTC-CSSEEEEEEEECTTTGG----G-----TSC---C-SSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred             hcCCHHHHHHHHHHHHHhc-CCCcEEEEEEecccccc----C-----CCC---C-CCcceeecCHHHHHHHhc--CceEE
Confidence            4567788999999999999 99999999886533210    0     000   0 001245789999999999  99999


Q ss_pred             EEEEc
Q 037161           84 RFQCF   88 (99)
Q Consensus        84 ~~~~~   88 (99)
                      ++...
T Consensus       167 ~~~~~  171 (202)
T 2kw5_A          167 IANNL  171 (202)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            88654

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.51  E-value=0.00012  Score=46.47  Aligned_cols=65  Identities=14%  Similarity=-0.070  Sum_probs=50.6

Q ss_pred             cCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161            5 AWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR   84 (99)
Q Consensus         5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~   84 (99)
                      +..-+....+|+++++.| +|||++++.+....                             +.+++.++++++||+.++
T Consensus       132 ~~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~-----------------------------~~~~~~~~~~~~Gf~~~~  181 (205)
T 3grz_A          132 NILAEILLDLIPQLDSHL-NEDGQVIFSGIDYL-----------------------------QLPKIEQALAENSFQIDL  181 (205)
T ss_dssp             ESCHHHHHHHGGGSGGGE-EEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTEEEEE
T ss_pred             CCcHHHHHHHHHHHHHhc-CCCCEEEEEecCcc-----------------------------cHHHHHHHHHHcCCceEE
Confidence            344455678899999999 99999998554321                             367899999999999999


Q ss_pred             EEEcCCCeeEEEEEC
Q 037161           85 FQCFVCNSWVMEFYK   99 (99)
Q Consensus        85 ~~~~~~~~~vie~~k   99 (99)
                      +...+...+++.-.|
T Consensus       182 ~~~~~~w~~~~~~~~  196 (205)
T 3grz_A          182 KMRAGRWIGLAISRK  196 (205)
T ss_dssp             EEEETTEEEEEEEEC
T ss_pred             eeccCCEEEEEEecc
Confidence            988877788877654

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=97.49  E-value=0.00016  Score=47.28  Aligned_cols=76  Identities=12%  Similarity=0.103  Sum_probs=45.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhch--Hhhhc----CCCceecCHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDV--FMLTH----SPRGKVRTKHEFINLA   75 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl--~m~~~----~~~g~~rt~~e~~~ll   75 (99)
                      ++|..+|  ..++|+++++.| +|||++++.......   .+...........  ..-..    ......++.++|.++|
T Consensus       104 ~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  177 (259)
T 2p35_A          104 VFQWVPD--HLAVLSQLMDQL-ESGGVLAVQMPDNLQ---EPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNAL  177 (259)
T ss_dssp             CGGGSTT--HHHHHHHHGGGE-EEEEEEEEEEECCTT---SHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHH
T ss_pred             chhhCCC--HHHHHHHHHHhc-CCCeEEEEEeCCCCC---cHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHH
Confidence            5777766  668999999999 999999998752211   1100000000000  00000    0134568999999999


Q ss_pred             HHcCCCee
Q 037161           76 TAAGFSGI   83 (99)
Q Consensus        76 ~~aGf~~~   83 (99)
                      +++||++.
T Consensus       178 ~~aGf~v~  185 (259)
T 2p35_A          178 SPKSSRVD  185 (259)
T ss_dssp             GGGEEEEE
T ss_pred             HhcCCceE
Confidence            99999743

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=97.38  E-value=3e-05  Score=52.37  Aligned_cols=75  Identities=16%  Similarity=0.290  Sum_probs=45.8

Q ss_pred             cCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH--cCCCe
Q 037161            5 AWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA--AGFSG   82 (99)
Q Consensus         5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~--aGf~~   82 (99)
                      +|+++...++|+++++.| +|||++++-......      +.+...+ .-.+.... .......++|.++|.+  +||+.
T Consensus       193 ~~~~~~~~~~l~~~~~~L-kpGG~lil~~~~~~~------y~~~~~~-~~~~~~~~-~~~~~~p~~~~~~L~~~~~GF~~  263 (292)
T 3g07_A          193 NWGDEGLKRMFRRIYRHL-RPGGILVLEPQPWSS------YGKRKTL-TETIYKNY-YRIQLKPEQFSSYLTSPDVGFSS  263 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHE-EEEEEEEEECCCHHH------HHTTTTS-CHHHHHHH-HHCCCCGGGHHHHHTSTTTCCCE
T ss_pred             cCCHHHHHHHHHHHHHHh-CCCcEEEEecCCchh------hhhhhcc-cHHHHhhh-hcEEEcHHHHHHHHHhcCCCceE
Confidence            568899999999999999 999988874321110      0000000 00000011 2233346899999999  99998


Q ss_pred             eEEEEc
Q 037161           83 IRFQCF   88 (99)
Q Consensus        83 ~~~~~~   88 (99)
                      +++...
T Consensus       264 ~~~~~~  269 (292)
T 3g07_A          264 YELVAT  269 (292)
T ss_dssp             EEEC--
T ss_pred             EEEecc
Confidence            887654

>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=97.17  E-value=0.0016  Score=42.32  Aligned_cols=28  Identities=25%  Similarity=0.424  Sum_probs=24.6

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEE
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIV   31 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I   31 (99)
                      +|.+++++..++|+++++.| +|||.+++
T Consensus       116 ~~~~~~~~~~~~l~~~~~~L-~pgG~li~  143 (252)
T 1wzn_A          116 IMYFDEEDLRKLFSKVAEAL-KPGGVFIT  143 (252)
T ss_dssp             GGGSCHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred             hhcCCHHHHHHHHHHHHHHc-CCCeEEEE
Confidence            56677888999999999999 99998876

>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}

Probab=96.95  E-value=0.00096  Score=45.45  Aligned_cols=86  Identities=16%  Similarity=0.189  Sum_probs=48.5

Q ss_pred             cccc-CChHHHHHHHHHHHHhccCCCceEEEEeeecCC---C-C--------CCchhhhhhhh----hchHh-hhcC---
Q 037161            2 ILHA-WSDEHCLKLLKNCYESINKEDGKLIVVEAVLPE---L-P--------ENSATSKANSQ----IDVFM-LTHS---   60 (99)
Q Consensus         2 vlHd-w~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~---~-~--------~~~~~~~~~~~----~dl~m-~~~~---   60 (99)
                      ++|. |++++..++|+++++.| +|||.+++...-.+.   . .        .......+...    .+-.. +...   
T Consensus       138 ~lhy~~~~~~~~~~l~~~~r~L-kpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (302)
T 2vdw_A          138 AIHYSFHPRHYATVMNNLSELT-ASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMS  216 (302)
T ss_dssp             CGGGTCSTTTHHHHHHHHHHHE-EEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBS
T ss_pred             hHHHhCCHHHHHHHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccccceeeccccC
Confidence            4564 55556689999999999 999999876542110   0 0        00000000000    00000 0000   


Q ss_pred             CCc--eecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           61 PRG--KVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        61 ~~g--~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      ..-  .-.+.+++.++++++||+++.....
T Consensus       217 ~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f  246 (302)
T 2vdw_A          217 TPMTEYIIKKNDIVRVFNEYGFVLVDNVDF  246 (302)
T ss_dssp             SCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred             CCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence            011  2467899999999999999988754

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.93  E-value=0.005  Score=40.62  Aligned_cols=64  Identities=11%  Similarity=0.065  Sum_probs=47.1

Q ss_pred             cCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161            5 AWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR   84 (99)
Q Consensus         5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~   84 (99)
                      +...+....+++++++.| +|||++++.+...+                             +.+++.++++++||++++
T Consensus       191 n~~~~~~~~~l~~~~~~L-kpgG~lils~~~~~-----------------------------~~~~v~~~l~~~Gf~~~~  240 (254)
T 2nxc_A          191 NLYAELHAALAPRYREAL-VPGGRALLTGILKD-----------------------------RAPLVREAMAGAGFRPLE  240 (254)
T ss_dssp             ECCHHHHHHHHHHHHHHE-EEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTCEEEE
T ss_pred             CCcHHHHHHHHHHHHHHc-CCCCEEEEEeeccC-----------------------------CHHHHHHHHHHCCCEEEE
Confidence            334455678999999999 99999998654321                             267899999999999999


Q ss_pred             EEEcCCCeeEEEEEC
Q 037161           85 FQCFVCNSWVMEFYK   99 (99)
Q Consensus        85 ~~~~~~~~~vie~~k   99 (99)
                      +...+... .+.++|
T Consensus       241 ~~~~~~W~-~l~~~k  254 (254)
T 2nxc_A          241 EAAEGEWV-LLAYGR  254 (254)
T ss_dssp             EEEETTEE-EEEEEC
T ss_pred             EeccCCeE-EEEEEC
Confidence            87765443 344544

>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}

Probab=96.90  E-value=0.0014  Score=43.64  Aligned_cols=66  Identities=14%  Similarity=0.161  Sum_probs=48.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|.++++...++|+++++.| +|||.++|+.....+....+                ......++.+++.++++.  |+
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~--~~  253 (286)
T 3m70_A          193 VFMFLNRERVPSIIKNMKEHT-NVGGYNLIVAAMSTDDVPCP----------------LPFSFTFAENELKEYYKD--WE  253 (286)
T ss_dssp             SGGGSCGGGHHHHHHHHHHTE-EEEEEEEEEEEBCCSSSCCS----------------SCCSCCBCTTHHHHHTTT--SE
T ss_pred             chhhCCHHHHHHHHHHHHHhc-CCCcEEEEEEecCCCCCCCC----------------CCccccCCHHHHHHHhcC--CE
Confidence            688889999999999999999 99999888776544332110                012345667788888865  88


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      ++...
T Consensus       254 ~~~~~  258 (286)
T 3m70_A          254 FLEYN  258 (286)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            87764

>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}

Probab=96.84  E-value=0.0017  Score=41.14  Aligned_cols=74  Identities=9%  Similarity=0.023  Sum_probs=44.8

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+++|  ..++|+++++.| +|||++++.+....    .. ...........-.......+.+|.+++.++|+  | 
T Consensus       103 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~i~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G-  171 (211)
T 2gs9_A          103 TTLEFVED--VERVLLEARRVL-RPGGALVVGVLEAL----SP-WAALYRRLGEKGVLPWAQARFLAREDLKALLG--P-  171 (211)
T ss_dssp             SCTTTCSC--HHHHHHHHHHHE-EEEEEEEEEEECTT----SH-HHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S-
T ss_pred             ChhhhcCC--HHHHHHHHHHHc-CCCCEEEEEecCCc----Cc-HHHHHHHHhhccCccccccccCCHHHHHHHhc--C-
Confidence            36788876  568999999999 99999999875322    11 10000000000000001356789999999999  7 


Q ss_pred             CeeEEE
Q 037161           81 SGIRFQ   86 (99)
Q Consensus        81 ~~~~~~   86 (99)
                       .+++.
T Consensus       172 -~~~~~  176 (211)
T 2gs9_A          172 -PEAEG  176 (211)
T ss_dssp             -CSEEE
T ss_pred             -cceeE
Confidence             44443

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.82  E-value=0.0033  Score=41.71  Aligned_cols=67  Identities=9%  Similarity=-0.063  Sum_probs=48.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      +||..++++..++++++++.| +|||+++++....+.....                 . .....|.+|+.++|+. +|+
T Consensus       161 ~l~~l~~~~~~~~l~~~~~~L-kpGG~l~l~~~~~~~~~~~-----------------g-~~~~~~~~el~~~l~~-~f~  220 (252)
T 2gb4_A          161 ALVAINPGDHDRYADIILSLL-RKEFQYLVAVLSYDPTKHA-----------------G-PPFYVPSAELKRLFGT-KCS  220 (252)
T ss_dssp             STTTSCGGGHHHHHHHHHHTE-EEEEEEEEEEEECCTTSCC-----------------C-SSCCCCHHHHHHHHTT-TEE
T ss_pred             hhhhCCHHHHHHHHHHHHHHc-CCCeEEEEEEEecCCccCC-----------------C-CCCCCCHHHHHHHhhC-CeE
Confidence            567778888889999999999 9999998765543321000                 0 0112578999999988 599


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      ++.+...
T Consensus       221 v~~~~~~  227 (252)
T 2gb4_A          221 MQCLEEV  227 (252)
T ss_dssp             EEEEEEE
T ss_pred             EEEEecc
Confidence            9887643

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.75  E-value=0.002  Score=42.66  Aligned_cols=60  Identities=7%  Similarity=-0.004  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~   89 (99)
                      +...++++++++| +|||+++|....-..+...+                    .....++-.+.|+++||++++...+.
T Consensus       160 ~~~~~l~~~~r~L-KpGG~lvI~ik~r~~d~~~p--------------------~~~~~~~ev~~L~~~GF~l~e~i~L~  218 (233)
T 4df3_A          160 QAAIVVRNARFFL-RDGGYMLMAIKARSIDVTTE--------------------PSEVYKREIKTLMDGGLEIKDVVHLD  218 (233)
T ss_dssp             HHHHHHHHHHHHE-EEEEEEEEEEECCHHHHHTC--------------------CCHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred             hHHHHHHHHHHhc-cCCCEEEEEEecccCCCCCC--------------------hHHHHHHHHHHHHHCCCEEEEEEccC
Confidence            4678899999999 99999998653211110000                    00112344567899999999998875


Q ss_pred             C
Q 037161           90 C   90 (99)
Q Consensus        90 ~   90 (99)
                      +
T Consensus       219 p  219 (233)
T 4df3_A          219 P  219 (233)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*

Probab=96.56  E-value=0.01  Score=39.35  Aligned_cols=60  Identities=10%  Similarity=0.089  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE-
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC-   87 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-   87 (99)
                      +...++++++++.| +|||.+++..        +                      ..+.+++.++++++||+.+++.+ 
T Consensus       215 ~~~~~~l~~~~~~L-kpgG~l~~~~--------~----------------------~~~~~~~~~~l~~~Gf~~v~~~~d  263 (276)
T 2b3t_A          215 ADIVHIIEQSRNAL-VSGGFLLLEH--------G----------------------WQQGEAVRQAFILAGYHDVETCRD  263 (276)
T ss_dssp             HHHHHHHHHHGGGE-EEEEEEEEEC--------C----------------------SSCHHHHHHHHHHTTCTTCCEEEC
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEEEE--------C----------------------chHHHHHHHHHHHCCCcEEEEEec
Confidence            45688999999999 9999888741        0                      11367899999999999888775 


Q ss_pred             cCCCeeEEEEEC
Q 037161           88 FVCNSWVMEFYK   99 (99)
Q Consensus        88 ~~~~~~vie~~k   99 (99)
                      ..+...++.+++
T Consensus       264 ~~g~~r~~~~~~  275 (276)
T 2b3t_A          264 YGDNERVTLGRY  275 (276)
T ss_dssp             TTSSEEEEEEEC
T ss_pred             CCCCCcEEEEEE
Confidence            445556666653

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=96.52  E-value=0.0054  Score=39.33  Aligned_cols=76  Identities=12%  Similarity=0.031  Sum_probs=46.3

Q ss_pred             ccccCCh-HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |++|.+. +....+++++++.| +|||++++. .........+                  .....+.+++.++ +++ |
T Consensus       147 v~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~-~~~~~~~~~~------------------~~~~~~~~~l~~l-~~~-f  204 (227)
T 1g8a_A          147 IFEDVAQPTQAKILIDNAEVYL-KRGGYGMIA-VKSRSIDVTK------------------EPEQVFREVEREL-SEY-F  204 (227)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHE-EEEEEEEEE-EEGGGTCTTS------------------CHHHHHHHHHHHH-HTT-S
T ss_pred             EEECCCCHhHHHHHHHHHHHhc-CCCCEEEEE-EecCCCCCCC------------------ChhhhhHHHHHHH-Hhh-c
Confidence            3444433 33445699999999 999999998 3221111110                  0012235677777 777 9


Q ss_pred             CeeEEEEcCCC---eeEEEEEC
Q 037161           81 SGIRFQCFVCN---SWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~~---~~vie~~k   99 (99)
                      ++++...+...   +.++.++|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~  226 (227)
T 1g8a_A          205 EVIERLNLEPYEKDHALFVVRK  226 (227)
T ss_dssp             EEEEEEECTTTSSSEEEEEEEC
T ss_pred             eeeeEeccCcccCCCEEEEEEe
Confidence            99998887543   56666654

>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*

Probab=96.45  E-value=0.0015  Score=42.58  Aligned_cols=68  Identities=10%  Similarity=0.061  Sum_probs=38.4

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~   89 (99)
                      ..+|+++++.| +|||++++...+-+. ......    ...+.   ... .......+|+.++++++||++..+..++
T Consensus       119 ~~~l~~~~r~L-kpGG~l~i~~~~~~~-~~~~~~----~~~~~---~~~-~~~~~~~~el~~~l~~aGf~v~~~~~~~  186 (225)
T 3p2e_A          119 RDILSNVADLA-KKEAHFEFVTTYSDS-YEEAEI----KKRGL---PLL-SKAYFLSEQYKAELSNSGFRIDDVKELD  186 (225)
T ss_dssp             HHHHHHHHTTE-EEEEEEEEEECCCC----------------------C-CHHHHHSHHHHHHHHHHTCEEEEEEEEC
T ss_pred             HHHHHHHHHhc-CCCcEEEEEEecccc-chhchh----hhcCC---CCC-ChhhcchHHHHHHHHHcCCCeeeeeecC
Confidence            35899999999 999999995433222 111000    00010   000 1111112359999999999999887654

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.29  E-value=0.0088  Score=37.70  Aligned_cols=51  Identities=12%  Similarity=0.209  Sum_probs=36.6

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI   83 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~   83 (99)
                      .+.+..+..++|+++++.| +|||++++.....+                             +.+++.++++++|| .+
T Consensus       114 ~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~-----------------------------~~~~~~~~l~~~g~-~~  162 (204)
T 3e05_A          114 IGGSGGMLEEIIDAVDRRL-KSEGVIVLNAVTLD-----------------------------TLTKAVEFLEDHGY-MV  162 (204)
T ss_dssp             ESCCTTCHHHHHHHHHHHC-CTTCEEEEEECBHH-----------------------------HHHHHHHHHHHTTC-EE
T ss_pred             ECCCCcCHHHHHHHHHHhc-CCCeEEEEEecccc-----------------------------cHHHHHHHHHHCCC-ce
Confidence            3444445778999999999 99999998543211                             35678888999998 44


Q ss_pred             EE
Q 037161           84 RF   85 (99)
Q Consensus        84 ~~   85 (99)
                      ++
T Consensus       163 ~~  164 (204)
T 3e05_A          163 EV  164 (204)
T ss_dssp             EE
T ss_pred             eE
Confidence            44

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=96.29  E-value=0.0047  Score=39.87  Aligned_cols=69  Identities=9%  Similarity=-0.004  Sum_probs=42.7

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEeeecCC-CCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEE
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEAVLPE-LPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQ   86 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~-~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~   86 (99)
                      .++...+++++++.| +|||++++ +..... ....+.                   ..+-..+ .++|+++||+++++.
T Consensus       158 ~~~~~~~~~~~~~~L-kpgG~l~i-~~~~~~~~~~~~~-------------------~~~~~~~-~~~l~~~Gf~~~~~~  215 (233)
T 2ipx_A          158 PDQTRIVALNAHTFL-RNGGHFVI-SIKANCIDSTASA-------------------EAVFASE-VKKMQQENMKPQEQL  215 (233)
T ss_dssp             TTHHHHHHHHHHHHE-EEEEEEEE-EEEHHHHCSSSCH-------------------HHHHHHH-HHTTGGGTEEEEEEE
T ss_pred             ccHHHHHHHHHHHHc-CCCeEEEE-EEcccccccCCCH-------------------HHHHHHH-HHHHHHCCCceEEEE
Confidence            345677899999999 99999998 332210 100000                   0001123 689999999999987


Q ss_pred             EcCC---CeeEEEEE
Q 037161           87 CFVC---NSWVMEFY   98 (99)
Q Consensus        87 ~~~~---~~~vie~~   98 (99)
                      .+..   .+.++.++
T Consensus       216 ~~~~~~~~~~~v~~~  230 (233)
T 2ipx_A          216 TLEPYERDHAVVVGV  230 (233)
T ss_dssp             ECTTTSSSEEEEEEE
T ss_pred             ecCCccCCcEEEEEE
Confidence            7653   35565554

>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}

Probab=96.13  E-value=0.0057  Score=38.93  Aligned_cols=66  Identities=9%  Similarity=0.022  Sum_probs=41.0

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~   89 (99)
                      ..+|+++++.| +|||++++.-....-....+         .+.-.  ......+..+++..+++++||++.++..+.
T Consensus       120 ~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~l~~~l~~aGf~i~~~~~~~  185 (218)
T 3mq2_A          120 PEMLRGMAAVC-RPGASFLVALNLHAWRPSVP---------EVGEH--PEPTPDSADEWLAPRYAEAGWKLADCRYLE  185 (218)
T ss_dssp             SHHHHHHHHTE-EEEEEEEEEEEGGGBTTBCG---------GGTTC--CCCCHHHHHHHHHHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHHHHHc-CCCcEEEEEecccccccccc---------ccccC--CccchHHHHHHHHHHHHHcCCCceeeeccc
Confidence            68899999999 99999998432211111000         11000  112233345568999999999999887653

>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}

Probab=96.06  E-value=0.0029  Score=41.49  Aligned_cols=68  Identities=19%  Similarity=0.263  Sum_probs=40.8

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      .++|+++++.| +|||++++.-  -|.....      ....+-.-.........++.+++.++++++||++..+...
T Consensus       117 ~~~l~~i~rvL-kpgG~lv~~~--~p~~e~~------~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~  184 (232)
T 3opn_A          117 DLILPPLYEIL-EKNGEVAALI--KPQFEAG------REQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFS  184 (232)
T ss_dssp             GGTHHHHHHHS-CTTCEEEEEE--CHHHHSC------HHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred             HHHHHHHHHhc-cCCCEEEEEE--CcccccC------HHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence            57899999999 9999999842  1100000      0000000000000112347889999999999999988754

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.95  E-value=0.0029  Score=40.98  Aligned_cols=64  Identities=11%  Similarity=0.126  Sum_probs=39.9

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG   82 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~   82 (99)
                      .+++..+.-..+|+++++.| +|||++++.+......           ...    ...........+++...+.++||+.
T Consensus       141 ~~~~~~~~~~~~l~~~~r~L-kpgG~l~~~~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~l~~aGF~~  204 (236)
T 1zx0_A          141 EETWHTHQFNFIKNHAFRLL-KPGGVLTYCNLTSWGE-----------LMK----SKYSDITIMFEETQVPALLEAGFRR  204 (236)
T ss_dssp             GGGTTTHHHHHHHHTHHHHE-EEEEEEEECCHHHHHH-----------HTT----TTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred             hhhhhhhhHHHHHHHHHHhc-CCCeEEEEEecCcHHH-----------hhc----hhhhhhhhhccHHHHHHHHHCCCCC
Confidence            45666666678999999999 9999999877531100           000    0000112222356677899999995

>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*

Probab=95.94  E-value=0.018  Score=40.02  Aligned_cols=78  Identities=15%  Similarity=0.062  Sum_probs=51.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhc---CCC-ceecCHHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH---SPR-GKVRTKHEFINLATA   77 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~---~~~-g~~rt~~e~~~ll~~   77 (99)
                      +|...+.+++.++|+.+.+..  |+|.++++|.+-++++    .++  .+.. ++-..   ..+ ....|.++..++|.+
T Consensus       200 vL~YL~~~~~~~ll~~ia~~f--~~~~~i~yE~i~p~d~----fg~--~M~~-~l~~~g~pl~sl~~y~t~~~~~~r~~~  270 (334)
T 3iei_A          200 VLVYMTPEQSANLLKWAANSF--ERAMFINYEQVNMGDR----FGQ--IMIE-NLRRRQCDLAGVETCKSLESQKERLLS  270 (334)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHC--SSEEEEEEEECCTTSH----HHH--HHHH-HHHTTTCCCTTGGGGGCHHHHHHHHHT
T ss_pred             hhhCCCHHHHHHHHHHHHHhC--CCceEEEEeccCCCCH----HHH--HHHH-HHHHhCCCCcccccCCCHHHHHHHHHH
Confidence            677889999999999999976  5577778899855431    111  1111 11000   001 134577899999999


Q ss_pred             cCCCeeEEEEc
Q 037161           78 AGFSGIRFQCF   88 (99)
Q Consensus        78 aGf~~~~~~~~   88 (99)
                      +||+.+++...
T Consensus       271 ~Gw~~~~~~d~  281 (334)
T 3iei_A          271 NGWETASAVDM  281 (334)
T ss_dssp             TTCSEEEEEEH
T ss_pred             cCCCcceeecH
Confidence            99999877654

>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*

Probab=95.86  E-value=0.0099  Score=40.05  Aligned_cols=85  Identities=15%  Similarity=0.060  Sum_probs=49.3

Q ss_pred             ccccC--ChHHHHHHHHHHHHhccCCCceEEEEeeecCC-------CCCCchhhh-----hhhhhch---------Hh--
Q 037161            2 ILHAW--SDEHCLKLLKNCYESINKEDGKLIVVEAVLPE-------LPENSATSK-----ANSQIDV---------FM--   56 (99)
Q Consensus         2 vlHdw--~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~-------~~~~~~~~~-----~~~~~dl---------~m--   56 (99)
                      ++|..  +.++...+|+++++.| +|||.+++...-.+.       .........     +...-++         .+  
T Consensus       123 ~l~~~~~~~~~~~~~l~~~~~~L-kpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~  201 (313)
T 3bgv_A          123 VCHYSFESYEQADMMLRNACERL-SPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEG  201 (313)
T ss_dssp             CGGGGGGSHHHHHHHHHHHHTTE-EEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC-
T ss_pred             chhhccCCHHHHHHHHHHHHHHh-CCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECC
Confidence            45554  4466889999999999 999999987652210       000000000     0000000         00  


Q ss_pred             hhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           57 LTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        57 ~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      .+.. .....+.+++.++++++||+++....+
T Consensus       202 ~~~~-~~~~~~~~~~~~l~~~~G~~~v~~~~f  232 (313)
T 3bgv_A          202 VVDV-PEFLVYFPLLNEMAKKYNMKLVYKKTF  232 (313)
T ss_dssp             --CC-EEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred             cccC-cceEEcHHHHHHHHHHcCcEEEEecCH
Confidence            0001 123467899999999999999988764

>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A

Probab=95.72  E-value=0.036  Score=38.39  Aligned_cols=76  Identities=13%  Similarity=0.106  Sum_probs=49.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh---hhcCCCceecCHHHHHHHHHHc
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM---LTHSPRGKVRTKHEFINLATAA   78 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m---~~~~~~g~~rt~~e~~~ll~~a   78 (99)
                      +|+..+.+++.++|+.+.+..  |+|.++++|.+.+..+..+. ++. ....+.-   .....-....|.++..+.|.++
T Consensus       203 vL~YL~~~~~~~ll~~ia~~~--~~~~~v~~e~i~~~~~~~~f-g~~-m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~  278 (334)
T 1rjd_A          203 LLCYMHNNESQLLINTIMSKF--SHGLWISYDPIGGSQPNDRF-GAI-MQSNLKESRNLEMPTLMTYNSKEKYASRWSAA  278 (334)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHC--SSEEEEEEEECCCCSTTCCH-HHH-HHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTS
T ss_pred             hhhCCCHHHHHHHHHHHHhhC--CCcEEEEEeccCCCCCcchH-HHH-HHHHhhcccCCcccccccCCCHHHHHHHHHHC
Confidence            688899999999999999876  67888899998774332221 110 0001100   0001012446889999999999


Q ss_pred             CCC
Q 037161           79 GFS   81 (99)
Q Consensus        79 Gf~   81 (99)
                      ||+
T Consensus       279 Gf~  281 (334)
T 1rjd_A          279 PNV  281 (334)
T ss_dssp             SEE
T ss_pred             CCC
Confidence            997

>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*

Probab=95.68  E-value=0.0049  Score=41.59  Aligned_cols=30  Identities=17%  Similarity=0.302  Sum_probs=28.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEE
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIV   31 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I   31 (99)
                      |||+.++++.-.+++++++++| +|||.+++
T Consensus       221 nvliyf~~~~~~~vl~~~~~~L-~pgG~L~l  250 (274)
T 1af7_A          221 NVMIYFDKTTQEDILRRFVPLL-KPDGLLFA  250 (274)
T ss_dssp             SSGGGSCHHHHHHHHHHHGGGE-EEEEEEEE
T ss_pred             CchHhCCHHHHHHHHHHHHHHh-CCCcEEEE
Confidence            6899999999999999999999 99999887

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.55  E-value=0.011  Score=39.56  Aligned_cols=30  Identities=17%  Similarity=0.386  Sum_probs=25.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      ++|..   +..++|+++++.| +|||.+++.+..
T Consensus       122 ~l~~~---~~~~~l~~~~~~L-kpgG~l~i~~~~  151 (299)
T 3g5t_A          122 CAHWF---DFEKFQRSAYANL-RKDGTIAIWGYA  151 (299)
T ss_dssp             CGGGS---CHHHHHHHHHHHE-EEEEEEEEEEEE
T ss_pred             HHHHh---CHHHHHHHHHHhc-CCCcEEEEEecC
Confidence            56777   4679999999999 999999996654

>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*

Probab=95.49  E-value=0.0093  Score=37.74  Aligned_cols=33  Identities=18%  Similarity=0.250  Sum_probs=27.9

Q ss_pred             CccccCCh-HHHHHHHHHHHHhccCCCceEEEEee
Q 037161            1 SILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         1 ~vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      +++|++++ +...++|+++++.| +|||.+++...
T Consensus       122 ~~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~  155 (216)
T 3ofk_A          122 EVLYYLEDMTQMRTAIDNMVKML-APGGHLVFGSA  155 (216)
T ss_dssp             SCGGGSSSHHHHHHHHHHHHHTE-EEEEEEEEEEE
T ss_pred             cHHHhCCCHHHHHHHHHHHHHHc-CCCCEEEEEec
Confidence            36888886 56779999999999 99999998665

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=95.45  E-value=0.027  Score=37.11  Aligned_cols=76  Identities=13%  Similarity=0.081  Sum_probs=42.5

Q ss_pred             ccccCChHHHHH-HHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWSDEHCLK-LLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~d~~~~~-iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |+.|.+..+-.+ +++++++.| +|||++++.-.   ...           .|...     ... -..++-...|+++||
T Consensus       150 I~~d~a~~~~~~il~~~~~~~L-kpGG~lvisik---~~~-----------~d~t~-----~~~-e~~~~~~~~L~~~gf  208 (232)
T 3id6_C          150 LYVDIAQPDQTDIAIYNAKFFL-KVNGDMLLVIK---ARS-----------IDVTK-----DPK-EIYKTEVEKLENSNF  208 (232)
T ss_dssp             EEECCCCTTHHHHHHHHHHHHE-EEEEEEEEEEC---------------------C-----CSS-SSTTHHHHHHHHTTE
T ss_pred             EEecCCChhHHHHHHHHHHHhC-CCCeEEEEEEc---cCC-----------cccCC-----CHH-HHHHHHHHHHHHCCC
Confidence            345554433444 445666699 99999999721   110           11100     001 112345567778999


Q ss_pred             CeeEEEEcCC---CeeEEEEE
Q 037161           81 SGIRFQCFVC---NSWVMEFY   98 (99)
Q Consensus        81 ~~~~~~~~~~---~~~vie~~   98 (99)
                      ++.+...+.+   .+.++.++
T Consensus       209 ~~~~~~~l~p~~~~h~~v~~~  229 (232)
T 3id6_C          209 ETIQIINLDPYDKDHAIVLSK  229 (232)
T ss_dssp             EEEEEEECTTTCSSCEEEEEE
T ss_pred             EEEEEeccCCCcCceEEEEEE
Confidence            9999988753   46666554

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.16  E-value=0.024  Score=34.76  Aligned_cols=63  Identities=14%  Similarity=0.173  Sum_probs=45.3

Q ss_pred             CChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEE
Q 037161            6 WSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRF   85 (99)
Q Consensus         6 w~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~   85 (99)
                      |+.+....+|+++++.| +|||++++.......                             ..++.+++++. |..+++
T Consensus       131 ~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~~-----------------------------~~~~~~~l~~~-~~~~~~  179 (194)
T 1dus_A          131 AGKEVLHRIIEEGKELL-KDNGEIWVVIQTKQG-----------------------------AKSLAKYMKDV-FGNVET  179 (194)
T ss_dssp             TCHHHHHHHHHHHHHHE-EEEEEEEEEEESTHH-----------------------------HHHHHHHHHHH-HSCCEE
T ss_pred             cchhHHHHHHHHHHHHc-CCCCEEEEEECCCCC-----------------------------hHHHHHHHHHH-hcceEE
Confidence            34677889999999999 999999987643110                             12566777777 667777


Q ss_pred             EEcCCCeeEEEEEC
Q 037161           86 QCFVCNSWVMEFYK   99 (99)
Q Consensus        86 ~~~~~~~~vie~~k   99 (99)
                      ......+.++.++|
T Consensus       180 ~~~~~~~~~~~~~k  193 (194)
T 1dus_A          180 VTIKGGYRVLKSKK  193 (194)
T ss_dssp             EEEETTEEEEEEEC
T ss_pred             EecCCcEEEEEEee
Confidence            77666777777765

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.12  E-value=0.06  Score=36.45  Aligned_cols=51  Identities=12%  Similarity=0.217  Sum_probs=38.2

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      .+++++++++| +|||.+++...    .  +        ..           ...+..++.+.++++||..+++...
T Consensus       190 ~~~l~~~~~~L-kpgG~lv~~~~----~--~--------~~-----------~~~~~~~~~~~l~~~GF~~v~~~~~  240 (304)
T 3bwc_A          190 EAFYKDVLRIL-KPDGICCNQGE----S--I--------WL-----------DLELIEKMSRFIRETGFASVQYALM  240 (304)
T ss_dssp             HHHHHHHHHHE-EEEEEEEEEEC----C--T--------TT-----------CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred             HHHHHHHHHhc-CCCcEEEEecC----C--c--------cc-----------chHHHHHHHHHHHhCCCCcEEEEEe
Confidence            68999999999 99999988621    1  0        00           1124678999999999999988754

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.11  E-value=0.0043  Score=40.47  Aligned_cols=63  Identities=11%  Similarity=0.045  Sum_probs=38.4

Q ss_pred             ChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEE
Q 037161            7 SDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRF   85 (99)
Q Consensus         7 ~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~   85 (99)
                      .-.+...+++++++.| +|||+++.++.........       ..++        +-.....+.+...|.++||++..+
T Consensus       145 ~~~~~~~~~~e~~rvL-kPGG~l~f~~~~~~~~~~~-------~~~~--------~~~~~~~~~~~~~L~eaGF~~~~i  207 (236)
T 3orh_A          145 HTHQFNFIKNHAFRLL-KPGGVLTYCNLTSWGELMK-------SKYS--------DITIMFEETQVPALLEAGFRRENI  207 (236)
T ss_dssp             TTHHHHHHHHTHHHHE-EEEEEEEECCHHHHHHHTT-------TTCS--------CHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred             hhcchhhhhhhhhhee-CCCCEEEEEecCCchhhhh-------hhhh--------hhhhhhHHHHHHHHHHcCCeEEEE
Confidence            3345788999999999 9999988764321110000       0000        112223456778889999997655

>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}

Probab=95.03  E-value=0.025  Score=38.54  Aligned_cols=68  Identities=15%  Similarity=0.174  Sum_probs=41.4

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      .++|+.+++.| +|||+++++  +.|.-....      ...+-.=.+....-..++.+++.++++++||++..+...
T Consensus       165 ~~vL~e~~rvL-kpGG~lv~l--vkPqfe~~~------~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~s  232 (291)
T 3hp7_A          165 NLILPALAKIL-VDGGQVVAL--VKPQFEAGR------EQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFS  232 (291)
T ss_dssp             GGTHHHHHHHS-CTTCEEEEE--ECGGGTSCG------GGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred             HHHHHHHHHHc-CcCCEEEEE--ECcccccCh------hhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Confidence            67899999999 999999986  222111110      001100000000113457889999999999999888753

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=94.93  E-value=0.038  Score=33.78  Aligned_cols=45  Identities=24%  Similarity=0.360  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI   83 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~   83 (99)
                      +....+|+++++.| +|||++++.....                             .+..++.++++++||...
T Consensus       111 ~~~~~~l~~~~~~l-~~gG~l~~~~~~~-----------------------------~~~~~~~~~l~~~g~~~~  155 (192)
T 1l3i_A          111 GELQEILRIIKDKL-KPGGRIIVTAILL-----------------------------ETKFEAMECLRDLGFDVN  155 (192)
T ss_dssp             TCHHHHHHHHHHTE-EEEEEEEEEECBH-----------------------------HHHHHHHHHHHHTTCCCE
T ss_pred             HHHHHHHHHHHHhc-CCCcEEEEEecCc-----------------------------chHHHHHHHHHHCCCceE
Confidence            34578999999999 9999998865310                             024578889999999443

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=94.84  E-value=0.089  Score=34.41  Aligned_cols=60  Identities=17%  Similarity=0.102  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      .....+++.+++.| +|||+++++   .+..                           +..++..+++++||...++.++
T Consensus       153 ~~~~~~l~~~~~~L-kpgG~l~~~---~~~~---------------------------~~~~~~~~l~~~~~~~~~~~~v  201 (259)
T 3lpm_A          153 CTLEDTIRVAASLL-KQGGKANFV---HRPE---------------------------RLLDIIDIMRKYRLEPKRIQFV  201 (259)
T ss_dssp             HHHHHHHHHHHHHE-EEEEEEEEE---ECTT---------------------------THHHHHHHHHHTTEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHc-cCCcEEEEE---EcHH---------------------------HHHHHHHHHHHCCCceEEEEEe
Confidence            34568999999999 999999984   2211                           1346778888899998887765


Q ss_pred             C------CCeeEEEEEC
Q 037161           89 V------CNSWVMEFYK   99 (99)
Q Consensus        89 ~------~~~~vie~~k   99 (99)
                      .      ....+++++|
T Consensus       202 ~~~~~~~~~~~l~~~~k  218 (259)
T 3lpm_A          202 HPRSDREANTVLVEGIK  218 (259)
T ss_dssp             ESSTTSCCSEEEEEEEE
T ss_pred             ecCCCCCcEEEEEEEEe
Confidence            2      2456777654

>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}

Probab=94.74  E-value=0.037  Score=34.52  Aligned_cols=56  Identities=9%  Similarity=-0.103  Sum_probs=38.1

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHH--HcCCCeeEEEEcC
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLAT--AAGFSGIRFQCFV   89 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~--~aGf~~~~~~~~~   89 (99)
                      .++++++++.| +|||++++++...                             ...+++.++++  ++||..+++.+..
T Consensus       144 ~~~l~~~~~~L-kpgG~l~~~~~~~-----------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~  193 (215)
T 4dzr_A          144 RRMAALPPYVL-ARGRAGVFLEVGH-----------------------------NQADEVARLFAPWRERGFRVRKVKDL  193 (215)
T ss_dssp             HHHHTCCGGGB-CSSSEEEEEECTT-----------------------------SCHHHHHHHTGGGGGGTEECCEEECT
T ss_pred             HHHHHHHHHHh-cCCCeEEEEEECC-----------------------------ccHHHHHHHHHHhhcCCceEEEEEec
Confidence            78899999999 9999966665310                             11346777788  8889888777643


Q ss_pred             -CCeeEEEE
Q 037161           90 -CNSWVMEF   97 (99)
Q Consensus        90 -~~~~vie~   97 (99)
                       +...++.+
T Consensus       194 ~~~~r~~~~  202 (215)
T 4dzr_A          194 RGIDRVIAV  202 (215)
T ss_dssp             TSCEEEEEE
T ss_pred             CCCEEEEEE
Confidence             33344433

>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*

Probab=94.73  E-value=0.05  Score=37.25  Aligned_cols=77  Identities=8%  Similarity=-0.044  Sum_probs=47.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC--------CCcee-cC-HHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS--------PRGKV-RT-KHEF   71 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~--------~~g~~-rt-~~e~   71 (99)
                      |||..++++...+|+.+.+.+ +||+. +++|.+.++.  +........+.. ..+...        ..-.. +| .++.
T Consensus       188 vl~Yl~~~~~~~ll~~l~~~~-~~gs~-l~~d~~~~~~--~~~~~~~~~~~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~  262 (310)
T 2uyo_A          188 LLMYLPATAQDGLFTEIGGLS-AVGSR-IAVETSPLHG--DEWREQMQLRFR-RVSDALGFEQAVDVQELIYHDENRAVV  262 (310)
T ss_dssp             CGGGSCHHHHHHHHHHHHHTC-CTTCE-EEEECCCTTC--SHHHHHHHHHHH-HHHC-----------CCTTCCTTCCCH
T ss_pred             hHhhCCHHHHHHHHHHHHHhC-CCCeE-EEEEecCCCC--cchhHHHHHHHH-HHHHHcCCcCCCCccccccCCCChHHH
Confidence            789999999999999999988 78765 5557765543  110000010110 001100        01122 25 6799


Q ss_pred             HHHHHHcCCCee
Q 037161           72 INLATAAGFSGI   83 (99)
Q Consensus        72 ~~ll~~aGf~~~   83 (99)
                      .++|.+.||+.+
T Consensus       263 ~~~f~~~G~~~~  274 (310)
T 2uyo_A          263 ADWLNRHGWRAT  274 (310)
T ss_dssp             HHHHTTTTEEEE
T ss_pred             HHHHHHCcCccc
Confidence            999999999988

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.44  E-value=0.0068  Score=38.98  Aligned_cols=47  Identities=13%  Similarity=0.043  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      ...+|+++++.| +|||+++                            .  -+...+.+++.++++++||+..++...
T Consensus       121 ~~~~l~~~~~~L-kpgG~l~----------------------------~--~~~~~~~~~~~~~l~~~Gf~~~~~~~~  167 (226)
T 3m33_A          121 PTSVILRLPELA-APDAHFL----------------------------Y--VGPRLNVPEVPERLAAVGWDIVAEDHV  167 (226)
T ss_dssp             CSGGGGGHHHHE-EEEEEEE----------------------------E--EESSSCCTHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHHHHc-CCCcEEE----------------------------E--eCCcCCHHHHHHHHHHCCCeEEEEEee
Confidence            345677888888 8888777                            0  011234567899999999998877643

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.40  E-value=0.084  Score=33.58  Aligned_cols=50  Identities=18%  Similarity=0.308  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~   89 (99)
                      ..++|+++.+.| +|||++++.-   +..                         ..+.+++.++++++||....+....
T Consensus       158 ~~~~l~~~~~~L-kpgG~l~~~~---~~~-------------------------~~~~~~~~~~l~~~g~~~~~~~~~~  207 (230)
T 3evz_A          158 SVKLLEEAFDHL-NPGGKVALYL---PDK-------------------------EKLLNVIKERGIKLGYSVKDIKFKV  207 (230)
T ss_dssp             HHHHHHHHGGGE-EEEEEEEEEE---ESC-------------------------HHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             HHHHHHHHHHHh-CCCeEEEEEe---ccc-------------------------HhHHHHHHHHHHHcCCceEEEEecC
Confidence            478999999999 9999999861   110                         0124688899999999777765443

>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54

Probab=94.24  E-value=0.00032  Score=46.03  Aligned_cols=68  Identities=13%  Similarity=0.108  Sum_probs=41.0

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~   89 (99)
                      ..+++++++.| +|||++.+++.++....        ..+....++... .+...+..++.++++++||+.+++....
T Consensus       172 ~~l~~~~~~~L-kpgG~l~~~~~~~~~~~--------~~l~~~g~~~~~-~~~~~~~~~~~~~l~~~Gf~~v~~~~~~  239 (254)
T 2h00_A          172 SVNTGGITEIM-AEGGELEFVKRIIHDSL--------QLKKRLRWYSCM-LGKKCSLAPLKEELRIQGVPKVTYTEFC  239 (254)
T ss_dssp             -----CTTTTH-HHHTHHHHHHHHHHHHH--------HHGGGBSCEEEE-ESSTTSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred             HHHhhhHHHHE-ecCCEEEEEHHHHHHHH--------hcccceEEEEEC-CCChhHHHHHHHHHHHcCCCceEEEEEe
Confidence            35778889999 99999988876543210        011111111111 3455566899999999999999887653

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=93.91  E-value=0.11  Score=32.93  Aligned_cols=34  Identities=9%  Similarity=-0.007  Sum_probs=25.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeec
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVL   36 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~   36 (99)
                      |+.|.+.+....+++++.+.| +|||.+++.+...
T Consensus       137 v~~d~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~~  170 (223)
T 3duw_A          137 IFIDADKQNNPAYFEWALKLS-RPGTVIIGDNVVR  170 (223)
T ss_dssp             EEECSCGGGHHHHHHHHHHTC-CTTCEEEEESCSG
T ss_pred             EEEcCCcHHHHHHHHHHHHhc-CCCcEEEEeCCCc
Confidence            344555666789999999999 9999777755543

>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}

Probab=93.46  E-value=0.3  Score=38.23  Aligned_cols=86  Identities=12%  Similarity=0.122  Sum_probs=48.4

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-----CCCchhhhhhhhhchHhhhcCCCceecCHHHHHH--
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-----PENSATSKANSQIDVFMLTHSPRGKVRTKHEFIN--   73 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-----~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~--   73 (99)
                      .++|+++++...++++++++.| +|| .++|.....+..     ..+...........-..+...++..+++.+||+.  
T Consensus       804 eVLeHL~dp~l~~~L~eI~RvL-KPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wa  881 (950)
T 3htx_A          804 EVIEHMEEDQACEFGEKVLSLF-HPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWA  881 (950)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHTT-CCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHHHHHH
T ss_pred             CchhhCChHHHHHHHHHHHHHc-CCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHHHHHH
Confidence            3789999999999999999999 998 666654321100     0000000000000001111223566789999988  


Q ss_pred             --HHHHcCCCeeEEEEcC
Q 037161           74 --LATAAGFSGIRFQCFV   89 (99)
Q Consensus        74 --ll~~aGf~~~~~~~~~   89 (99)
                        +.+..||++ ++.+++
T Consensus       882 e~LAer~GYsV-efvGVG  898 (950)
T 3htx_A          882 SKLGKRHNYSV-EFSGVG  898 (950)
T ss_dssp             HHHHHHTTEEE-EEEEES
T ss_pred             HHHHHhcCcEE-EEEccC
Confidence              556779855 555554

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=93.06  E-value=0.03  Score=36.37  Aligned_cols=55  Identities=7%  Similarity=0.078  Sum_probs=38.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC--
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG--   79 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG--   79 (99)
                      |+.|+++.  ..+|+++++.| +|||++++.....+                             ...++.++++++|  
T Consensus       166 v~~~~~~~--~~~l~~~~~~L-~~gG~l~~~~~~~~-----------------------------~~~~~~~~l~~~g~~  213 (255)
T 3mb5_A          166 VILDLPQP--ERVVEHAAKAL-KPGGFFVAYTPCSN-----------------------------QVMRLHEKLREFKDY  213 (255)
T ss_dssp             EEECSSCG--GGGHHHHHHHE-EEEEEEEEEESSHH-----------------------------HHHHHHHHHHHTGGG
T ss_pred             EEECCCCH--HHHHHHHHHHc-CCCCEEEEEECCHH-----------------------------HHHHHHHHHHHcCCC
Confidence            34456553  56899999999 99999988642110                             1446777888888  


Q ss_pred             CCeeEEEEc
Q 037161           80 FSGIRFQCF   88 (99)
Q Consensus        80 f~~~~~~~~   88 (99)
                      |..+++...
T Consensus       214 f~~~~~~e~  222 (255)
T 3mb5_A          214 FMKPRTINV  222 (255)
T ss_dssp             BSCCEEECC
T ss_pred             ccccEEEEE
Confidence            888777543

>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}

Probab=92.99  E-value=0.42  Score=29.20  Aligned_cols=49  Identities=8%  Similarity=0.110  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~   89 (99)
                      +...+++++.+.+  |||++++.+...                             .+.+++.++++++||+.+.+....
T Consensus       102 ~~~~~~~~~~~~l--pgG~l~~~~~~~-----------------------------~~~~~l~~~l~~~gf~~~~~~~~~  150 (170)
T 3q87_B          102 LGREVIDRFVDAV--TVGMLYLLVIEA-----------------------------NRPKEVLARLEERGYGTRILKVRK  150 (170)
T ss_dssp             GGCHHHHHHHHHC--CSSEEEEEEEGG-----------------------------GCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             chHHHHHHHHhhC--CCCEEEEEEecC-----------------------------CCHHHHHHHHHHCCCcEEEEEeec
Confidence            4566788888877  888888766211                             135688999999999998887653

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=92.78  E-value=0.13  Score=34.35  Aligned_cols=31  Identities=6%  Similarity=0.161  Sum_probs=27.3

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      ++|+|++++....|+++++.|  |||++++.-.
T Consensus       119 ~l~~~~~~~~~~~l~~l~~lL--PGG~l~lS~~  149 (261)
T 3iv6_A          119 LINRFTTEEARRACLGMLSLV--GSGTVRASVK  149 (261)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHH--TTSEEEEEEE
T ss_pred             hhHhCCHHHHHHHHHHHHHhC--cCcEEEEEec
Confidence            689999999999999999988  8999988643

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=92.71  E-value=0.79  Score=34.37  Aligned_cols=81  Identities=16%  Similarity=0.130  Sum_probs=51.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhh-cC-CCceecCHHHHHHHHHHcC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT-HS-PRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~-~~-~~g~~rt~~e~~~ll~~aG   79 (99)
                      +|...+.+++.++|+.+. .+  |+|.++++|.+.+..+..+. .+. ....+...- .. .--...|.++..+.|.++|
T Consensus       226 vl~Yl~~~~~~~ll~~~~-~~--~~~~~~~~e~~~~~~~~d~f-~~~-m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~G  300 (695)
T 2zwa_A          226 SLAYMKPERSDSIIEATS-KM--ENSHFIILEQLIPKGPFEPF-SKQ-MLAHFKRNDSPLQSVLKYNTIESQVQRFNKLG  300 (695)
T ss_dssp             SGGGSCHHHHHHHHHHHH-TS--SSEEEEEEEECCTTCTTSHH-HHH-HHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTT
T ss_pred             EEEEcCHHHHHHHHHHHh-hC--CCceEEEEEeecCCCCCChH-HHH-HHHHHHHcCCCCCccccCCCHHHHHHHHHHCC
Confidence            577889999999999987 46  47788999998775433321 110 001111000 00 0113457999999999999


Q ss_pred             CCeeEEEE
Q 037161           80 FSGIRFQC   87 (99)
Q Consensus        80 f~~~~~~~   87 (99)
                      |+.+....
T Consensus       301 w~~v~~~~  308 (695)
T 2zwa_A          301 FAYVNVGD  308 (695)
T ss_dssp             CCEEEEEE
T ss_pred             CCCcceee
Confidence            99876654

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=92.58  E-value=0.086  Score=34.94  Aligned_cols=32  Identities=9%  Similarity=0.050  Sum_probs=24.9

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP   37 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~   37 (99)
                      ++|..+.   .+.++++++.| +|||++++.....+
T Consensus       108 ~~h~~~~---~~~~~e~~rvL-kpgG~l~~~~~~~~  139 (257)
T 4hg2_A          108 AMHWFDL---DRFWAELRRVA-RPGAVFAAVTYGLT  139 (257)
T ss_dssp             CCTTCCH---HHHHHHHHHHE-EEEEEEEEEEECCC
T ss_pred             ehhHhhH---HHHHHHHHHHc-CCCCEEEEEECCCC
Confidence            5665543   36899999999 99999999887544

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=92.30  E-value=0.043  Score=35.51  Aligned_cols=53  Identities=19%  Similarity=0.113  Sum_probs=35.7

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG   82 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~   82 (99)
                      +.++++  ...+|+++++.| +|||++++.....+                             ...+..+.++++||..
T Consensus       171 ~~~~~~--~~~~l~~~~~~L-~~gG~l~~~~~~~~-----------------------------~~~~~~~~l~~~gf~~  218 (258)
T 2pwy_A          171 ALDLME--PWKVLEKAALAL-KPDRFLVAYLPNIT-----------------------------QVLELVRAAEAHPFRL  218 (258)
T ss_dssp             EEESSC--GGGGHHHHHHHE-EEEEEEEEEESCHH-----------------------------HHHHHHHHHTTTTEEE
T ss_pred             EECCcC--HHHHHHHHHHhC-CCCCEEEEEeCCHH-----------------------------HHHHHHHHHHHCCCce
Confidence            335554  347899999999 99999999763110                             1235666677788887


Q ss_pred             eEEEE
Q 037161           83 IRFQC   87 (99)
Q Consensus        83 ~~~~~   87 (99)
                      +++..
T Consensus       219 ~~~~~  223 (258)
T 2pwy_A          219 ERVLE  223 (258)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            76654

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=92.29  E-value=0.27  Score=32.04  Aligned_cols=33  Identities=6%  Similarity=0.071  Sum_probs=24.9

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP   37 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~   37 (99)
                      -|.+.+.....|+++.+.| +|||.+++.+...+
T Consensus       142 ~d~~~~~~~~~l~~~~~~L-kpGG~lv~d~~~~~  174 (242)
T 3r3h_A          142 IDADKTNYLNYYELALKLV-TPKGLIAIDNIFWD  174 (242)
T ss_dssp             EESCGGGHHHHHHHHHHHE-EEEEEEEEECSSSS
T ss_pred             EcCChHHhHHHHHHHHHhc-CCCeEEEEECCccC
Confidence            3444556778999999999 99998888665543

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=92.15  E-value=0.17  Score=32.55  Aligned_cols=33  Identities=15%  Similarity=0.121  Sum_probs=25.8

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeec
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVL   36 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~   36 (99)
                      +-++..+....+++++.+.| +|||++++.+...
T Consensus       152 ~~~~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~~  184 (239)
T 2hnk_A          152 FLDADKENYPNYYPLILKLL-KPGGLLIADNVLW  184 (239)
T ss_dssp             EECSCGGGHHHHHHHHHHHE-EEEEEEEEECSSG
T ss_pred             EEeCCHHHHHHHHHHHHHHc-CCCeEEEEEcccc
Confidence            44556667789999999999 9999998865443

>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}

Probab=91.95  E-value=0.84  Score=32.07  Aligned_cols=77  Identities=10%  Similarity=0.111  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhh-ch-----HhhhcC------------CCceecCHHHH
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQI-DV-----FMLTHS------------PRGKVRTKHEF   71 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~-dl-----~m~~~~------------~~g~~rt~~e~   71 (99)
                      +-..+|+..++.| +|||++++.=.-.++. .+.........+ ++     .-|+..            ---..+|.+|+
T Consensus       203 D~~~fL~~ra~eL-~pGG~mvl~~~gr~~~-~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~  280 (374)
T 3b5i_A          203 DLAEFLRARAAEV-KRGGAMFLVCLGRTSV-DPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDF  280 (374)
T ss_dssp             HHHHHHHHHHHHE-EEEEEEEEEEEECCCS-STTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHH
T ss_pred             HHHHHHHHHHHHh-CCCCEEEEEEecCCCC-ccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHH
Confidence            3455799999999 9999988865533322 110000001111 11     001110            00224899999


Q ss_pred             HHHHH-HcCCCeeEEEEc
Q 037161           72 INLAT-AAGFSGIRFQCF   88 (99)
Q Consensus        72 ~~ll~-~aGf~~~~~~~~   88 (99)
                      +++++ ++||++.++...
T Consensus       281 ~~~l~~~~~F~I~~le~~  298 (374)
T 3b5i_A          281 KEVVDANGSFAIDKLVVY  298 (374)
T ss_dssp             HHHHHHHCSEEEEEEEEE
T ss_pred             HHHHHhcCCcEEEEEEEE
Confidence            99998 599999887644

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=91.82  E-value=0.1  Score=37.63  Aligned_cols=31  Identities=19%  Similarity=0.300  Sum_probs=26.2

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCC
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELP   40 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~   40 (99)
                      ++..+.|+++++.| +|||+|++.|.+.+++.
T Consensus       265 pdl~~aL~Ei~RvL-KPGGrIVssE~f~p~d~  295 (438)
T 3uwp_A          265 PEVDHQLKERFANM-KEGGRIVSSKPFAPLNF  295 (438)
T ss_dssp             HHHHHHHHHHHTTS-CTTCEEEESSCSSCTTC
T ss_pred             chHHHHHHHHHHcC-CCCcEEEEeecccCCCC
Confidence            44667788999999 99999999999888764

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=91.39  E-value=0.065  Score=33.43  Aligned_cols=27  Identities=11%  Similarity=0.208  Sum_probs=23.3

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      .++..++|+++++.| +|||++++.+..
T Consensus       135 ~~~~~~~l~~~~~~L-kpgG~li~~~~~  161 (215)
T 2pxx_A          135 VHTVDQVLSEVSRVL-VPGGRFISMTSA  161 (215)
T ss_dssp             HHHHHHHHHHHHHHE-EEEEEEEEEESC
T ss_pred             hHHHHHHHHHHHHhC-cCCCEEEEEeCC
Confidence            456789999999999 999999998754

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=91.03  E-value=0.067  Score=35.38  Aligned_cols=52  Identities=8%  Similarity=0.013  Sum_probs=35.8

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI   83 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~   83 (99)
                      -|+++.  .++|+++.+.| +|||++++......                             ..+++.++++++||+.+
T Consensus       185 ~~~~~~--~~~l~~~~~~L-kpgG~l~i~~~~~~-----------------------------~~~~~~~~l~~~Gf~~~  232 (275)
T 1yb2_A          185 ADIPDP--WNHVQKIASMM-KPGSVATFYLPNFD-----------------------------QSEKTVLSLSASGMHHL  232 (275)
T ss_dssp             ECCSCG--GGSHHHHHHTE-EEEEEEEEEESSHH-----------------------------HHHHHHHHSGGGTEEEE
T ss_pred             EcCcCH--HHHHHHHHHHc-CCCCEEEEEeCCHH-----------------------------HHHHHHHHHHHCCCeEE
Confidence            345443  47899999999 99999998762110                             13456667777888887


Q ss_pred             EEEE
Q 037161           84 RFQC   87 (99)
Q Consensus        84 ~~~~   87 (99)
                      ++..
T Consensus       233 ~~~~  236 (275)
T 1yb2_A          233 ETVE  236 (275)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7765

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=90.80  E-value=0.22  Score=32.45  Aligned_cols=32  Identities=9%  Similarity=-0.013  Sum_probs=24.7

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +-|.+.......|+++++.| +|||.|++.+..
T Consensus       141 ~~d~~~~~~~~~l~~~~~~L-kpGG~lv~~~~~  172 (248)
T 3tfw_A          141 FIDADKPNNPHYLRWALRYS-RPGTLIIGDNVV  172 (248)
T ss_dssp             EECSCGGGHHHHHHHHHHTC-CTTCEEEEECCS
T ss_pred             EECCchHHHHHHHHHHHHhc-CCCeEEEEeCCC
Confidence            44555666788999999999 999988775543

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=90.63  E-value=0.07  Score=34.82  Aligned_cols=79  Identities=11%  Similarity=0.150  Sum_probs=44.2

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchH-hhhcCC-----------CceecCHHH
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVF-MLTHSP-----------RGKVRTKHE   70 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~-m~~~~~-----------~g~~rt~~e   70 (99)
                      +++|.++ ..++|+++++.| +|||++++........... ...  ...++.. ......           ....+|.++
T Consensus       124 ~~~~~~~-~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (260)
T 2avn_A          124 VLSYVEN-KDKAFSEIRRVL-VPDGLLIATVDNFYTFLQQ-MIE--KDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPED  198 (260)
T ss_dssp             HHHHCSC-HHHHHHHHHHHE-EEEEEEEEEEEBHHHHHHH-HHH--TTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGG
T ss_pred             hhhcccc-HHHHHHHHHHHc-CCCeEEEEEeCChHHHHHH-hhc--chhHHHHHHHHhccccccCCCceeEEEeccCHHH
Confidence            3445333 788999999999 9999999876532100000 000  0000000 000000           012568888


Q ss_pred             HHHHHHHcCCCeeEEEEcC
Q 037161           71 FINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        71 ~~~ll~~aGf~~~~~~~~~   89 (99)
                      +.++   +||+++++....
T Consensus       199 l~~l---aGf~~~~~~~~~  214 (260)
T 2avn_A          199 LDSL---EGFETVDIRGIG  214 (260)
T ss_dssp             GSSC---TTEEEEEEEEEC
T ss_pred             HHHh---cCceEEEEECCC
Confidence            8888   999999988764

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=90.19  E-value=0.12  Score=32.73  Aligned_cols=34  Identities=9%  Similarity=0.068  Sum_probs=26.4

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP   37 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~   37 (99)
                      +.|.+.+....+++++++.| +|||.+++.+...+
T Consensus       145 ~~~~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~~~  178 (225)
T 3tr6_A          145 YIDADKANTDLYYEESLKLL-REGGLIAVDNVLRR  178 (225)
T ss_dssp             EECSCGGGHHHHHHHHHHHE-EEEEEEEEECSSGG
T ss_pred             EECCCHHHHHHHHHHHHHhc-CCCcEEEEeCCCcC
Confidence            34555566788999999999 99999988776543

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=90.07  E-value=0.13  Score=33.99  Aligned_cols=27  Identities=22%  Similarity=0.469  Sum_probs=20.4

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      -|.++  ...+|+++.+.| +|||++++.+
T Consensus       187 ~~~~~--~~~~l~~~~~~L-~pgG~l~~~~  213 (277)
T 1o54_A          187 LDVPD--PWNYIDKCWEAL-KGGGRFATVC  213 (277)
T ss_dssp             ECCSC--GGGTHHHHHHHE-EEEEEEEEEE
T ss_pred             ECCcC--HHHHHHHHHHHc-CCCCEEEEEe
Confidence            34444  347888999999 9999988876

>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*

Probab=89.99  E-value=0.92  Score=32.04  Aligned_cols=75  Identities=11%  Similarity=0.077  Sum_probs=41.9

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeecCCCC-CCchh-hhhhhhhchHhh--------hcC-CCceecCHHHHHHHHHHcC-
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVLPELP-ENSAT-SKANSQIDVFML--------THS-PRGKVRTKHEFINLATAAG-   79 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~-~~~~~-~~~~~~~dl~m~--------~~~-~~g~~rt~~e~~~ll~~aG-   79 (99)
                      ..+|+..++.| +|||++++.=.-.+... .+... .-...+.|+.--        -.. ---..+|.+|++.+++++| 
T Consensus       205 ~~FL~~Ra~eL-~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~  283 (384)
T 2efj_A          205 TTFLRIHSEEL-ISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGS  283 (384)
T ss_dssp             HHHHHHHHHHE-EEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHh-ccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCC
Confidence            34599999999 99999988554333220 11100 001112222100        000 0123589999999999985 


Q ss_pred             CCeeEEEE
Q 037161           80 FSGIRFQC   87 (99)
Q Consensus        80 f~~~~~~~   87 (99)
                      |++.++..
T Consensus       284 F~i~~le~  291 (384)
T 2efj_A          284 FEILYLET  291 (384)
T ss_dssp             EEEEEEEE
T ss_pred             ceEEEEEE
Confidence            88877654

>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}

Probab=89.92  E-value=0.11  Score=35.52  Aligned_cols=28  Identities=18%  Similarity=0.294  Sum_probs=24.4

Q ss_pred             CChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161            6 WSDEHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         6 w~d~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      ++.+...++|+++++.| +|||+++|+..
T Consensus       277 ~~~~~~~~~l~~~~~~L-kpgG~l~i~~~  304 (343)
T 2pjd_A          277 TSLDAAQTLIRGAVRHL-NSGGELRIVAN  304 (343)
T ss_dssp             HHHHHHHHHHHHHGGGE-EEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhC-CCCcEEEEEEc
Confidence            35677899999999999 99999999765

>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35

Probab=89.53  E-value=4  Score=28.50  Aligned_cols=75  Identities=8%  Similarity=-0.035  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCc------hhhh-hhhhhchHhhhc---------CCCceecCHHHHHH
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENS------ATSK-ANSQIDVFMLTH---------SPRGKVRTKHEFIN   73 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~------~~~~-~~~~~dl~m~~~---------~~~g~~rt~~e~~~   73 (99)
                      +-..+|+..++.| .|||++++.=.-.+.. .+.      .... ...+.||.---.         .---..+|.+|++.
T Consensus       187 D~~~FL~~Ra~EL-~pGG~mvl~~~gr~~~-~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~  264 (359)
T 1m6e_X          187 DHALFLRCRAQEV-VPGGRMVLTILGRRSE-DRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEA  264 (359)
T ss_dssp             HHHHHHHHHHHHB-CTTCEEEEEEEECSSS-SSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHH
T ss_pred             HHHHHHHHHHHHh-cCCceEEEEEecCCCC-CccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHH
Confidence            4567899999999 9999998755443322 110      0000 111222210000         00124788999999


Q ss_pred             HHHHcC-CCeeEEE
Q 037161           74 LATAAG-FSGIRFQ   86 (99)
Q Consensus        74 ll~~aG-f~~~~~~   86 (99)
                      +++++| |++.++.
T Consensus       265 ~ie~~G~F~i~~~e  278 (359)
T 1m6e_X          265 EILKEGSFLIDHIE  278 (359)
T ss_dssp             HHHHTTTBCCEEEE
T ss_pred             HHHHcCCceEEEEE
Confidence            999996 4777654

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=88.66  E-value=0.57  Score=30.07  Aligned_cols=50  Identities=16%  Similarity=0.155  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      ...+++.+++.| +|||++++.+...     .  .                    ....++.+.++++||++.++..+
T Consensus       153 ~~~~l~~~~~~L-kpgG~l~~~~g~~-----~--~--------------------~~~~~~~~~l~~~g~~~~~~~~~  202 (240)
T 1xdz_A          153 LSVLSELCLPLV-KKNGLFVALKAAS-----A--E--------------------EELNAGKKAITTLGGELENIHSF  202 (240)
T ss_dssp             HHHHHHHHGGGE-EEEEEEEEEECC------C--H--------------------HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHHHHhc-CCCCEEEEEeCCC-----c--h--------------------HHHHHHHHHHHHcCCeEeEEEEE
Confidence            568999999999 9999998863110     0  0                    01346778899999999887653

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=87.71  E-value=0.038  Score=37.66  Aligned_cols=71  Identities=8%  Similarity=0.050  Sum_probs=20.5

Q ss_pred             HHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhh---hchHhhhcCCCcee-------cCHHHHHHHHHHcCCCee
Q 037161           14 LLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQ---IDVFMLTHSPRGKV-------RTKHEFINLATAAGFSGI   83 (99)
Q Consensus        14 iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~---~dl~m~~~~~~g~~-------rt~~e~~~ll~~aGf~~~   83 (99)
                      +|+++++.| +|||++++.....+.-..  ....+...   +........ ..+.       +...+|.+.|+.|||+++
T Consensus       201 ~l~~~~~~L-kpgG~lv~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~g~y~~~l~~aGF~~v  276 (336)
T 2b25_A          201 TLPVFYPHL-KHGGVCAVYVVNITQVIE--LLDGIRTCELALSCEKISEV-IVRDWLVCLAKQKNGILAQKVESKINTDV  276 (336)
T ss_dssp             THHHHGGGE-EEEEEEEEEESSHHHHHH--HHHHHHHHTCCEEEEEEECC-CCCCEEECC--------------------
T ss_pred             HHHHHHHhc-CCCcEEEEEeCCHHHHHH--HHHHHHhcCCCcccceEEEe-cccceEEEeecccccchhhhhcccccccc
Confidence            789999999 999999987643221100  00000000   000000000 1111       122399999999999998


Q ss_pred             EEEEc
Q 037161           84 RFQCF   88 (99)
Q Consensus        84 ~~~~~   88 (99)
                      ++...
T Consensus       277 ~~~~~  281 (336)
T 2b25_A          277 QLDSQ  281 (336)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            87644

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=87.35  E-value=0.34  Score=29.62  Aligned_cols=59  Identities=10%  Similarity=0.140  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF   88 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~   88 (99)
                      +...++|+++++.| +|||++++....-.+.. ..                    ......+|.+.+...+|.+.+....
T Consensus       112 ~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~-~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~  169 (185)
T 3mti_A          112 HTTLEAIEKILDRL-EVGGRLAIMIYYGHDGG-DM--------------------EKDAVLEYVIGLDQRVFTAMLYQPL  169 (185)
T ss_dssp             HHHHHHHHHHHHHE-EEEEEEEEEEC-------CH--------------------HHHHHHHHHHHSCTTTEEEEEEEES
T ss_pred             hhHHHHHHHHHHhc-CCCcEEEEEEeCCCCCC-HH--------------------HHHHHHHHHHhCCCceEEEEEehhh
Confidence            56778899999999 99999999765322111 00                    0112345666666778888887765


Q ss_pred             C
Q 037161           89 V   89 (99)
Q Consensus        89 ~   89 (99)
                      .
T Consensus       170 ~  170 (185)
T 3mti_A          170 N  170 (185)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=87.11  E-value=0.14  Score=32.23  Aligned_cols=32  Identities=16%  Similarity=0.188  Sum_probs=24.0

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +.|.+......+++++++.| +|||.+++.+..
T Consensus       131 ~~~~~~~~~~~~l~~~~~~L-kpgG~lv~~~~~  162 (210)
T 3c3p_A          131 FMDCDVFNGADVLERMNRCL-AKNALLIAVNAL  162 (210)
T ss_dssp             EEETTTSCHHHHHHHHGGGE-EEEEEEEEESSS
T ss_pred             EEcCChhhhHHHHHHHHHhc-CCCeEEEEECcc
Confidence            33444455788999999999 999988875543

>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A

Probab=86.99  E-value=0.9  Score=29.28  Aligned_cols=26  Identities=12%  Similarity=0.213  Sum_probs=22.6

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEee
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      .+...++++++++.| +|||++++.+.
T Consensus       190 ~~~~~~~l~~~~~~L-kpgG~l~~~~~  215 (250)
T 1o9g_A          190 GQPVAGLLRSLASAL-PAHAVIAVTDR  215 (250)
T ss_dssp             HHHHHHHHHHHHHHS-CTTCEEEEEES
T ss_pred             ccHHHHHHHHHHHhc-CCCcEEEEeCc
Confidence            477889999999999 99999998554

>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}

Probab=86.79  E-value=0.36  Score=32.07  Aligned_cols=36  Identities=17%  Similarity=0.014  Sum_probs=24.1

Q ss_pred             CceecC---HHHHHHHHHHcCCCeeEEEEcCCCeeEEEE
Q 037161           62 RGKVRT---KHEFINLATAAGFSGIRFQCFVCNSWVMEF   97 (99)
Q Consensus        62 ~g~~rt---~~e~~~ll~~aGf~~~~~~~~~~~~~vie~   97 (99)
                      +|...|   ...+++.|.+|||++.++...+.....+.+
T Consensus       206 GG~l~tysaa~~vrr~L~~aGF~v~~~~g~~~kr~m~~a  244 (257)
T 2qy6_A          206 GGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCG  244 (257)
T ss_dssp             EEEEEESCCBHHHHHHHHHHTEEEEEECCSTTCCCEEEE
T ss_pred             CcEEEEEeCCHHHHHHHHHCCCEEEeCCCCCCCCceEEE
Confidence            555554   567889999999998876555544444443

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=86.41  E-value=0.33  Score=30.90  Aligned_cols=23  Identities=22%  Similarity=0.291  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEE
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      ++...+|+++++.| +|||++++.
T Consensus       138 ~~~~~~l~~~~r~L-kpgG~l~i~  160 (210)
T 1nt2_A          138 NQIEILKANAEFFL-KEKGEVVIM  160 (210)
T ss_dssp             THHHHHHHHHHHHE-EEEEEEEEE
T ss_pred             hHHHHHHHHHHHHh-CCCCEEEEE
Confidence            34556699999999 999999997

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=86.13  E-value=0.13  Score=33.05  Aligned_cols=32  Identities=13%  Similarity=0.156  Sum_probs=24.1

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +.+.+.+....+++++.+.| +|||.+++.+..
T Consensus       147 ~~~~~~~~~~~~l~~~~~~L-kpgG~lv~d~~~  178 (232)
T 3ntv_A          147 FIDAAKAQSKKFFEIYTPLL-KHQGLVITDNVL  178 (232)
T ss_dssp             EEETTSSSHHHHHHHHGGGE-EEEEEEEEECTT
T ss_pred             EEcCcHHHHHHHHHHHHHhc-CCCeEEEEeeCC
Confidence            34555556788999999999 999988774443

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=86.12  E-value=0.5  Score=33.88  Aligned_cols=30  Identities=17%  Similarity=0.159  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCC
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPEL   39 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~   39 (99)
                      ++....|+++++.| +|||++++.|.+.+..
T Consensus       336 ~d~~~~L~el~r~L-KpGG~lVi~d~f~p~~  365 (433)
T 1u2z_A          336 EDLNKKVEKILQTA-KVGCKIISLKSLRSLT  365 (433)
T ss_dssp             HHHHHHHHHHHTTC-CTTCEEEESSCSSCTT
T ss_pred             ccHHHHHHHHHHhC-CCCeEEEEeeccCCcc
Confidence            45567789999999 9999999999877755

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=85.40  E-value=0.49  Score=29.06  Aligned_cols=22  Identities=18%  Similarity=0.264  Sum_probs=19.4

Q ss_pred             HHHHHHHHHhccCCCceEEEEee
Q 037161           12 LKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      .++|+++++.| +|||++++...
T Consensus       125 ~~~l~~~~~~L-kpgG~lv~~~~  146 (196)
T 2nyu_A          125 LTLLSVTPDIL-QPGGTFLCKTW  146 (196)
T ss_dssp             HHHHHHHHHHE-EEEEEEEEEEC
T ss_pred             HHHHHHHHHHh-cCCCEEEEEec
Confidence            58899999999 99999998754

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=85.37  E-value=0.65  Score=30.26  Aligned_cols=31  Identities=13%  Similarity=0.113  Sum_probs=23.4

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      -|.+......+++++.+.| +|||.+++.+..
T Consensus       162 ~d~~~~~~~~~l~~~~~~L-kpGG~lv~d~~~  192 (247)
T 1sui_A          162 VDADKDNYLNYHKRLIDLV-KVGGVIGYDNTL  192 (247)
T ss_dssp             ECSCSTTHHHHHHHHHHHB-CTTCCEEEECTT
T ss_pred             EcCchHHHHHHHHHHHHhC-CCCeEEEEecCC
Confidence            3444455788999999999 999988775543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=85.35  E-value=0.62  Score=28.00  Aligned_cols=22  Identities=9%  Similarity=0.306  Sum_probs=19.3

Q ss_pred             HHHHHHHHHhccCCCceEEEEee
Q 037161           12 LKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      .++++++++.| +|||++++.+.
T Consensus       107 ~~~l~~~~~~L-~~gG~l~~~~~  128 (178)
T 3hm2_A          107 PGVFAAAWKRL-PVGGRLVANAV  128 (178)
T ss_dssp             TTHHHHHHHTC-CTTCEEEEEEC
T ss_pred             HHHHHHHHHhc-CCCCEEEEEee
Confidence            67899999999 99999998664

>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*

Probab=85.34  E-value=2  Score=28.42  Aligned_cols=50  Identities=10%  Similarity=0.129  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161           11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR   84 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~   84 (99)
                      ..++++++.+.| +|||.+++.+.......                       .....+++.+.++++||+...
T Consensus       204 ~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~-----------------------~~~~~~~i~~~~~~~G~~~~~  253 (278)
T 2frn_A          204 THEFIPKALSIA-KDGAIIHYHNTVPEKLM-----------------------PREPFETFKRITKEYGYDVEK  253 (278)
T ss_dssp             GGGGHHHHHHHE-EEEEEEEEEEEEEGGGT-----------------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHC-CCCeEEEEEEeeccccc-----------------------cccHHHHHHHHHHHcCCeeEE
Confidence            467899999999 99999999887532110                       112456888999999998876

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=85.10  E-value=0.43  Score=30.85  Aligned_cols=32  Identities=9%  Similarity=0.037  Sum_probs=24.2

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      |+-|.+......+++++.+.| +|||.+++.+.
T Consensus       151 I~~d~~~~~~~~~l~~~~~~L-~pGG~lv~d~~  182 (237)
T 3c3y_A          151 GFVDADKPNYIKYHERLMKLV-KVGGIVAYDNT  182 (237)
T ss_dssp             EEECSCGGGHHHHHHHHHHHE-EEEEEEEEECT
T ss_pred             EEECCchHHHHHHHHHHHHhc-CCCeEEEEecC
Confidence            344555666789999999999 99998766443

>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}

Probab=85.01  E-value=0.48  Score=21.16  Aligned_cols=18  Identities=28%  Similarity=0.589  Sum_probs=15.1

Q ss_pred             HHHHHHHHHHhccCCCceE
Q 037161           11 CLKLLKNCYESINKEDGKL   29 (99)
Q Consensus        11 ~~~iL~~~~~al~~pgg~l   29 (99)
                      |+.+++++...+ +.+||.
T Consensus         4 cr~likriqa~i-pk~grm   21 (34)
T 1ssz_A            4 CRALIKRIQAMI-PKGGRM   21 (34)
T ss_dssp             HHHHHHHHHHHC-SSSCCC
T ss_pred             HHHHHHHHHHHc-cccchh
Confidence            788999998888 888875

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=84.93  E-value=0.15  Score=32.55  Aligned_cols=31  Identities=3%  Similarity=0.092  Sum_probs=23.6

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      -+++.+....+|+++.+.| +|||++++.+..
T Consensus       132 ~~~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~  162 (233)
T 2gpy_A          132 IDAAKGQYRRFFDMYSPMV-RPGGLILSDNVL  162 (233)
T ss_dssp             EEGGGSCHHHHHHHHGGGE-EEEEEEEEETTT
T ss_pred             ECCCHHHHHHHHHHHHHHc-CCCeEEEEEcCC
Confidence            3444445678999999999 999999886543

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=84.81  E-value=0.33  Score=30.70  Aligned_cols=31  Identities=19%  Similarity=0.450  Sum_probs=24.2

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      -|.+......+++++.+.| +|||.+++.+..
T Consensus       151 ~d~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~  181 (229)
T 2avd_A          151 VDADKENCSAYYERCLQLL-RPGGILAVLRVL  181 (229)
T ss_dssp             ECSCSTTHHHHHHHHHHHE-EEEEEEEEECCS
T ss_pred             ECCCHHHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence            3444555678999999999 999998887654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=84.80  E-value=0.91  Score=31.00  Aligned_cols=23  Identities=9%  Similarity=0.198  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEe
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      +-.++++++++.| +|||++++.+
T Consensus       200 d~~~~l~el~r~L-kPGG~Lvv~~  222 (298)
T 3fpf_A          200 PKRRVFRNIHRYV-DTETRIIYRT  222 (298)
T ss_dssp             CHHHHHHHHHHHC-CTTCEEEEEE
T ss_pred             CHHHHHHHHHHHc-CCCcEEEEEc
Confidence            3568999999999 9999999976

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=84.66  E-value=0.74  Score=28.33  Aligned_cols=26  Identities=23%  Similarity=0.273  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +...++|+++.+.| +|||++++....
T Consensus       116 ~~~~~~l~~~~~~L-k~gG~l~~~~~~  141 (197)
T 3eey_A          116 ETTIQALSKAMELL-VTGGIITVVIYY  141 (197)
T ss_dssp             HHHHHHHHHHHHHE-EEEEEEEEEECC
T ss_pred             ccHHHHHHHHHHhC-cCCCEEEEEEcc
Confidence            35667999999999 999999998754

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=84.01  E-value=0.67  Score=31.38  Aligned_cols=24  Identities=29%  Similarity=0.481  Sum_probs=20.7

Q ss_pred             HHHHHHHHHhccCCCceEEEEeeec
Q 037161           12 LKLLKNCYESINKEDGKLIVVEAVL   36 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~~~   36 (99)
                      .++|+++++.| +|||++++....+
T Consensus       226 ~~~L~~~~~~L-kpGG~lv~stcs~  249 (315)
T 1ixk_A          226 MRLLEKGLEVL-KPGGILVYSTCSL  249 (315)
T ss_dssp             HHHHHHHHHHE-EEEEEEEEEESCC
T ss_pred             HHHHHHHHHhC-CCCCEEEEEeCCC
Confidence            68999999999 9999998876544

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=83.80  E-value=0.51  Score=30.29  Aligned_cols=33  Identities=3%  Similarity=0.126  Sum_probs=25.1

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeec
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVL   36 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~   36 (99)
                      +.|.+.+....+++++.+.| +|||.+++.+...
T Consensus       153 ~~d~~~~~~~~~l~~~~~~L-kpgG~lv~~~~~~  185 (232)
T 3cbg_A          153 FIDADKRNYPRYYEIGLNLL-RRGGLMVIDNVLW  185 (232)
T ss_dssp             EECSCGGGHHHHHHHHHHTE-EEEEEEEEECTTG
T ss_pred             EECCCHHHHHHHHHHHHHHc-CCCeEEEEeCCCc
Confidence            33444566788999999999 9999988866543

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=83.79  E-value=0.83  Score=27.02  Aligned_cols=22  Identities=18%  Similarity=0.298  Sum_probs=19.7

Q ss_pred             HHHHHHHHHhccCCCceEEEEee
Q 037161           12 LKLLKNCYESINKEDGKLIVVEA   34 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~e~   34 (99)
                      .++|+++.+.| +|||++++...
T Consensus       116 ~~~l~~~~~~L-~~gG~l~~~~~  137 (180)
T 1ej0_A          116 ELALEMCRDVL-APGGSFVVKVF  137 (180)
T ss_dssp             HHHHHHHHHHE-EEEEEEEEEEE
T ss_pred             HHHHHHHHHHc-CCCcEEEEEEe
Confidence            68999999999 99999998665

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=83.76  E-value=1.9  Score=26.33  Aligned_cols=29  Identities=14%  Similarity=0.012  Sum_probs=23.4

Q ss_pred             CChHHHHHHHHHHHH--hccCCCceEEEEeee
Q 037161            6 WSDEHCLKLLKNCYE--SINKEDGKLIVVEAV   35 (99)
Q Consensus         6 w~d~~~~~iL~~~~~--al~~pgg~l~I~e~~   35 (99)
                      +..++..++++.+.+  .| +|||++++....
T Consensus       125 ~~~~~~~~~l~~~~~~~~L-~pgG~l~~~~~~  155 (189)
T 3p9n_A          125 VDSADVDAILAALGTNGWT-REGTVAVVERAT  155 (189)
T ss_dssp             SCHHHHHHHHHHHHHSSSC-CTTCEEEEEEET
T ss_pred             cchhhHHHHHHHHHhcCcc-CCCeEEEEEecC
Confidence            344678899999999  99 999999886543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=83.66  E-value=0.3  Score=41.86  Aligned_cols=75  Identities=12%  Similarity=0.103  Sum_probs=24.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      +||.-++  ....|+++++.| +|||++++.|......     .+.....++-.   ...++..-+.++|.++|..+||.
T Consensus      1320 vl~~t~~--~~~~l~~~~~lL-~p~G~l~~~e~~~~~~-----~g~~~~~~~~~---~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A         1320 ALATLGD--PAVAVGNMAATL-KEGGFLLLHTLLAGHP-----LGEMVGFLTSP---EQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp             C-----------------------CCEEEEEEC----------------------------------CTTTTSSTTTTEE
T ss_pred             ccccccc--HHHHHHHHHHhc-CCCcEEEEEecccccc-----ccccccccccc---cccCCcccCHHHHHHHHHhCCCc
Confidence            4553333  456899999999 9999999987532100     00000001100   00012345677899999999999


Q ss_pred             eeEEEE
Q 037161           82 GIRFQC   87 (99)
Q Consensus        82 ~~~~~~   87 (99)
                      .+....
T Consensus      1389 ~~~~~~ 1394 (2512)
T 2vz8_A         1389 LVALKR 1394 (2512)
T ss_dssp             EEEEEE
T ss_pred             eeeecc
Confidence            877643

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=82.91  E-value=0.47  Score=30.44  Aligned_cols=32  Identities=16%  Similarity=0.312  Sum_probs=23.9

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +-|.+..+....++++.+.| +|||.+++.+..
T Consensus       134 ~~d~~~~~~~~~l~~~~~~L-kpGG~lv~dn~~  165 (221)
T 3dr5_A          134 FGQVSPMDLKALVDAAWPLL-RRGGALVLADAL  165 (221)
T ss_dssp             EECCCTTTHHHHHHHHHHHE-EEEEEEEETTTT
T ss_pred             EEcCcHHHHHHHHHHHHHHc-CCCcEEEEeCCC
Confidence            44555556678999999999 999988874443

>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*

Probab=82.91  E-value=0.32  Score=34.87  Aligned_cols=29  Identities=10%  Similarity=0.245  Sum_probs=24.0

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      |.|  ++..+.|+++++.| +|||.++|.|..
T Consensus       298 H~~--~d~~~aL~el~rvL-KPGGvlVi~Dl~  326 (419)
T 3sso_A          298 HIN--AHVRTSFAALFPHV-RPGGLYVIEDMW  326 (419)
T ss_dssp             CCH--HHHHHHHHHHGGGE-EEEEEEEEECGG
T ss_pred             ccc--hhHHHHHHHHHHhc-CCCeEEEEEecc
Confidence            544  34678999999999 999999998865

>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}

Probab=81.55  E-value=0.72  Score=28.44  Aligned_cols=20  Identities=25%  Similarity=0.233  Sum_probs=17.2

Q ss_pred             HHHHHHHHHhccCCCceEEEE
Q 037161           12 LKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus        12 ~~iL~~~~~al~~pgg~l~I~   32 (99)
                      .++|+++++.| +|||++++.
T Consensus       134 ~~~l~~~~~~L-kpgG~lv~~  153 (201)
T 2plw_A          134 LSITHFMEQYI-NIGGTYIVK  153 (201)
T ss_dssp             HHHHHHHHHHE-EEEEEEEEE
T ss_pred             HHHHHHHHHHc-cCCCEEEEE
Confidence            35899999999 999998874

>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}

Probab=80.68  E-value=1.8  Score=28.63  Aligned_cols=28  Identities=14%  Similarity=0.135  Sum_probs=21.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccC---C--CceEEEE
Q 037161            2 ILHAWSDEHCLKLLKNCYESINK---E--DGKLIVV   32 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~---p--gg~l~I~   32 (99)
                      ++|+.  +....+|+.+++.| +   |  ||+++|+
T Consensus       172 vl~~~--~~~~~ll~~l~~~L-k~~~p~~gG~l~v~  204 (281)
T 3bzb_A          172 LLSFH--QAHDALLRSVKMLL-ALPANDPTAVALVT  204 (281)
T ss_dssp             CCSCG--GGHHHHHHHHHHHB-CCTTTCTTCEEEEE
T ss_pred             cccCh--HHHHHHHHHHHHHh-cccCCCCCCEEEEE
Confidence            34443  34778999999999 8   8  9998773

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	99
d1fp1d2	244	c.66.1.12 (D:129-372) Chalcone O-methyltransferase	2e-23
d1kyza2	243	c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferuli	3e-22
d1fp2a2	244	c.66.1.12 (A:109-352) Isoflavone O-methyltransfera	5e-20
d1qzza2	256	c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase	5e-10
d1tw3a2	253	c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransf	8e-07

>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 244

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Chalcone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

 Score = 87.5 bits (216), Expect = 2e-23
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)

Query: 2   ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP 61
           + H WSDE C++ L NC++++   +GK+I+VE +LPE P  S  SK  S +D  M   + 
Sbjct: 148 VCHNWSDEKCIEFLSNCHKAL-SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TV 205

Query: 62  RGKVRTKHEFINLATAAGFSGIRFQCFVCNS-WVMEFYK 99
            G+ RT+ ++  L+  +GFS  +  C   NS  VMEFYK
Sbjct: 206 GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 244

>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 243

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

 Score = 84.5 bits (208), Expect = 3e-22
 Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 1/97 (1%)

Query: 1   SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS 60
            I H WSDEHCLK LKNCYE++  ++GK+IV E +LP  P++S  +K    IDV ML H+
Sbjct: 147 WICHDWSDEHCLKFLKNCYEAL-PDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHN 205

Query: 61  PRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEF 97
           P GK RT+ EF +LA  AGF G +  C   N+++MEF
Sbjct: 206 PGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEF 242

>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 244

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Isoflavone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

 Score = 78.6 bits (193), Expect = 5e-20
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 1   SILHAWSDEHCLKLLKNCYESI--NKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT 58
            ILH W+D+ CL++LK C E++  + + GK+ +++ V+ +  + +  ++    +DV M  
Sbjct: 146 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC 205

Query: 59  HSPRGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFY 98
            +  GK R + E+  L   AGF   +         ++E Y
Sbjct: 206 LN--GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 243

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} Length = 256

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

 Score = 52.3 bits (124), Expect = 5e-10
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 4   HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRG 63
             WSDE  L +L+ C  ++ +  G+L+V++        + A    ++ +D+ MLT    G
Sbjct: 158 LNWSDEDALTILRGCVRAL-EPGGRLLVLDRADV--EGDGADRFFSTLLDLRMLTFMG-G 213

Query: 64  KVRTKHEFINLATAAGFSGIRFQ-----CFVCNSWVMEFY 98
           +VRT+ E ++LA +AG +    +         +  ++EF 
Sbjct: 214 RVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFT 253

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} Length = 253

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

 Score = 43.1 bits (100), Expect = 8e-07
 Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 4   HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRG 63
             W D   +++L  C E++ +  G++++ E         ++ ++  +++D+ ML     G
Sbjct: 157 LNWPDHDAVRILTRCAEAL-EPGGRILIHERDDLH---ENSFNEQFTELDLRMLVF-LGG 211

Query: 64  KVRTKHEFINLATAAGFSGIR 84
            +RT+ ++  LA +AG     
Sbjct: 212 ALRTREKWDGLAASAGLVVEE 232

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	99
d1fp1d2	244	Chalcone O-methyltransferase {Alfalfa (Medicago sa	99.96
d1fp2a2	244	Isoflavone O-methyltransferase {Alfalfa (Medicago	99.96
d1kyza2	243	Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra	99.95
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	99.9
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	99.84
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	99.04
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	98.97
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	98.84
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	98.66
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	98.59
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	98.41
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	98.34
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	98.33
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	98.16
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	98.04
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	98.03
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	97.81
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.78
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	97.77
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	97.77
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	97.46
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	97.29
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	97.28
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	97.23
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	97.13
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.83
d1af7a2	193	Chemotaxis receptor methyltransferase CheR, C-term	96.73
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.52
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.36
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.25
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	96.12
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	95.94
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.98
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	93.89
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	93.64
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	89.89
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	89.83
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	89.6
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	87.59
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	87.53
d2uyoa1	297	Putative methyltransferase ML2640 {Mycobacterium l	82.38
d1rjda_	328	Leucine carboxy methyltransferase Ppm1 {Baker's ye	81.2

>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Chalcone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.96  E-value=4.3e-30  Score=171.06  Aligned_cols=97  Identities=39%  Similarity=0.737  Sum_probs=87.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||||+|++|++||++++++| +|||+|+|+|.++|+.+..+........+|+.||+.+ +|++||.+||.+||++|||
T Consensus       147 ~vLh~~~de~~~~iL~~~~~aL-~pgg~llI~e~v~~~~~~~~~~~~~~~~~d~~m~~~~-~g~ert~~e~~~ll~~AGF  224 (244)
T d1fp1d2         147 AVCHNWSDEKCIEFLSNCHKAL-SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGF  224 (244)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHH-SCCCEEHHHHHHHHHHTTC
T ss_pred             hhhhhCCHHHHHHHHHHHHHHc-CCCcEEEEEEEEecCCCCCchHHHHHHHHHHHHHhhC-CCcCCCHHHHHHHHHHcCC
Confidence            6999999999999999999999 9999999999999987665544455678899999887 9999999999999999999


Q ss_pred             CeeEEEEc-CCCeeEEEEEC
Q 037161           81 SGIRFQCF-VCNSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~-~~~~~vie~~k   99 (99)
                      +.+++++. .+..+|||++|
T Consensus       225 ~~v~v~~~~~~~~~viE~~K  244 (244)
T d1fp1d2         225 SKFQVACRAFNSLGVMEFYK  244 (244)
T ss_dssp             SEEEEEEEETTTEEEEEEEC
T ss_pred             CceEEEecCCCCEEEEEEeC
Confidence            99999865 47899999998

>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Isoflavone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.96  E-value=1.9e-29  Score=167.91  Aligned_cols=96  Identities=29%  Similarity=0.573  Sum_probs=86.1

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCC---ceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKED---GKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA   77 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pg---g~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~   77 (99)
                      +|||||+|++|++||++|++|| +||   |+++|+|.++++.+..+........+|++|+. + +|++||.+||++||++
T Consensus       146 ~vLHdw~d~~~~~iL~~~~~al-~pgg~~~~lli~e~~~~~~~~~~~~~~~~~~~dl~m~~-~-~G~ert~~e~~~ll~~  222 (244)
T d1fp2a2         146 YILHNWTDKDCLRILKKCKEAV-TNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGKERNEEEWKKLFIE  222 (244)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHH-SGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCCCEEHHHHHHHHHH
T ss_pred             eecccCChHHHHHHHHHHHHHc-CcccCCcEEEEEEeecCCCCCCchHHHHHHHHHHHHHh-C-CCcCCCHHHHHHHHHH
Confidence            6999999999999999999999 998   89999999999876654444445678998886 4 8999999999999999


Q ss_pred             cCCCeeEEEEcCCCeeEEEEEC
Q 037161           78 AGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        78 aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      |||++++++++++..+|||++|
T Consensus       223 AGf~~~~i~~~~~~~svIE~~p  244 (244)
T d1fp2a2         223 AGFQHYKISPLTGFLSLIEIYP  244 (244)
T ss_dssp             TTCCEEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEEEECCCCeEEEEEeC
Confidence            9999999999999999999997

>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.95  E-value=8.2e-28  Score=159.64  Aligned_cols=97  Identities=52%  Similarity=0.968  Sum_probs=86.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||+|+|++|++||++++++| +|||+++|+|.++++....+........+|+.||+.+.+|++||.+||++||++|||
T Consensus       147 ~vlh~~~d~~~~~iL~~~~~al-~pgg~~li~d~~~~~~~~~~~~~~~~~~~d~~ml~~~~~g~ert~~e~~~ll~~AGf  225 (243)
T d1kyza2         147 WICHDWSDEHCLKFLKNCYEAL-PDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGF  225 (243)
T ss_dssp             SSSTTSCHHHHHHHHHHHHHHC-CSSSCEEEEECEECSSCCCCHHHHHHHHHHHHHHHHCSSCCCEEHHHHHHHHHHHCC
T ss_pred             EEeecCCHHHHHHHHHHHHHhc-CCCceEEEEEEEecCCCCCchhhHHHHHHHHHHHhhCCCCCcCCHHHHHHHHHHcCC
Confidence            6899999999999999999999 999999999999987765543444456789999987668999999999999999999


Q ss_pred             CeeEEEEcCCCeeEEEEE
Q 037161           81 SGIRFQCFVCNSWVMEFY   98 (99)
Q Consensus        81 ~~~~~~~~~~~~~vie~~   98 (99)
                      +.+++++..+..+|||.+
T Consensus       226 ~~vkv~~~~~~~~viE~~  243 (243)
T d1kyza2         226 QGFKVHCNAFNTYIMEFL  243 (243)
T ss_dssp             SCEEEEEEETTEEEEEEC
T ss_pred             CcEEEEEeCCCCEEEEeC
Confidence            999999998999999964

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=99.90  E-value=2.6e-24  Score=143.42  Aligned_cols=95  Identities=28%  Similarity=0.453  Sum_probs=78.9

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +|||+|+|+++.++|++|+++| +|||+++|+|.+.+++....  ......+|+.|+..+ +|++||.+||++||++|||
T Consensus       155 ~vLh~~~d~~~~~lL~~i~~~L-kpgG~llI~d~~~~~~~~~~--~~~~~~~d~~ml~~~-~g~~rt~~e~~~ll~~AGf  230 (256)
T d1qzza2         155 FVLLNWSDEDALTILRGCVRAL-EPGGRLLVLDRADVEGDGAD--RFFSTLLDLRMLTFM-GGRVRTRDEVVDLAGSAGL  230 (256)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEECCH---------HHHHHHHHHHHHHHH-SCCCCCHHHHHHHHHTTTE
T ss_pred             ccccccCcHHHHHHHHHHHhhc-CCcceeEEEEeccCCCCccc--HHHHHHHHHHHHhhC-CCccCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 99999999999876543322  234567899999987 9999999999999999999


Q ss_pred             CeeEEEEcCC-----CeeEEEEEC
Q 037161           81 SGIRFQCFVC-----NSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~-----~~~vie~~k   99 (99)
                      +++++++.+.     ..+|||+.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~v~E~~~  254 (256)
T d1qzza2         231 ALASERTSGSTTLPFDFSILEFTA  254 (256)
T ss_dssp             EEEEEEEECCSSCSSCEEEEEEEE
T ss_pred             ceeEEEEeCCcCccCceEEEEEEe
Confidence            9999998753     469999864

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=99.84  E-value=1.2e-21  Score=129.95  Aligned_cols=94  Identities=19%  Similarity=0.353  Sum_probs=78.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++||+|+|+++.++|++++++| +|||+|+|.|...++.....   .....+|+.|+..+ +|++||.+||++||++|||
T Consensus       154 ~vlh~~~d~~~~~~L~~~~~~L-kPGG~l~i~e~~~~~~~~~~---~~~~~~dl~~~~~~-~g~~rt~~e~~~ll~~AGf  228 (253)
T d1tw3a2         154 FVLLNWPDHDAVRILTRCAEAL-EPGGRILIHERDDLHENSFN---EQFTELDLRMLVFL-GGALRTREKWDGLAASAGL  228 (253)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHTE-EEEEEEEEEECCBCGGGCCS---HHHHHHHHHHHHHH-SCCCCBHHHHHHHHHHTTE
T ss_pred             cccccCCchhhHHHHHHHHHhc-CCCcEEEEEeccCCCCCcch---hHHHHhhHHHHhhC-CCcCCCHHHHHHHHHHCCC
Confidence            5899999999999999999999 99999999998766554332   23467899999887 9999999999999999999


Q ss_pred             CeeEEEEcCC-----CeeEEEEEC
Q 037161           81 SGIRFQCFVC-----NSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~-----~~~vie~~k   99 (99)
                      ++++++.+++     ..++|+..|
T Consensus       229 ~~~~v~~~~~p~~~~~~~li~~~P  252 (253)
T d1tw3a2         229 VVEEVRQLPSPTIPYDLSLLVLAP  252 (253)
T ss_dssp             EEEEEEEEECSSSSCEEEEEEEEE
T ss_pred             eEEEEEECCCCCCCccEEEEEEec
Confidence            9999987643     346777653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=99.04  E-value=4.4e-10  Score=71.98  Aligned_cols=97  Identities=16%  Similarity=0.073  Sum_probs=64.4

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC-------------CCceecC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS-------------PRGKVRT   67 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~-------------~~g~~rt   67 (99)
                      .++|.+++++..++|++++++| +|||.+++.|...+..+.... ........+......             ..-...|
T Consensus       116 ~~l~~~~~~d~~~~l~~i~~~L-kpgG~li~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  193 (225)
T d1im8a_         116 FTLQFLPPEDRIALLTKIYEGL-NPNGVLVLSEKFRFEDTKINH-LLIDLHHQFKRANGYSELEVSQKRTALENVMRTDS  193 (225)
T ss_dssp             SCGGGSCGGGHHHHHHHHHHHE-EEEEEEEEEEECCCSSHHHHH-HHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCCC
T ss_pred             eeccccChhhHHHHHHHHHHhC-CCCceeecccccccccchhhh-HHHHHHHHHHHHcCCCHHHHHHHHHHhhcccCCCC
Confidence            3689999999999999999999 999999999988775532110 000011111010000             0013578


Q ss_pred             HHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161           68 KHEFINLATAAGFSGIRFQCFVCNSWVMEFYK   99 (99)
Q Consensus        68 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k   99 (99)
                      .+++.++|++|||+.++++--......+-|+|
T Consensus       194 ~~~~~~~L~~aGF~~v~~~~~~~~f~~~~a~k  225 (225)
T d1im8a_         194 IETHKVRLKNVGFSQVELWFQCFNFGSMIAVK  225 (225)
T ss_dssp             HHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred             HHHHHHHHHHcCCCceEEeeeeCceEEEEEEC
Confidence            99999999999999998864334455566665

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=98.97  E-value=7.4e-10  Score=72.62  Aligned_cols=72  Identities=14%  Similarity=0.198  Sum_probs=58.2

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      +++|+++|++..++|++|+++| +|||.++|.|.+......         ..|.     .+++..||.++|.++|++|||
T Consensus       166 ~vl~hl~d~d~~~~l~~~~~~L-kpgG~iii~e~~~~~~~~---------~~d~-----~d~~~~rs~~~~~~l~~~aGf  230 (254)
T d1xtpa_         166 WTAIYLTDADFVKFFKHCQQAL-TPNGYIFFKENCSTGDRF---------LVDK-----EDSSLTRSDIHYKRLFNESGV  230 (254)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEBC--CCE---------EEET-----TTTEEEBCHHHHHHHHHHHTC
T ss_pred             ccccccchhhhHHHHHHHHHhc-CCCcEEEEEecCCCCCcc---------eecc-----cCCceeCCHHHHHHHHHHcCC
Confidence            4799999999999999999999 999999999987553311         1221     236778999999999999999


Q ss_pred             CeeEEEE
Q 037161           81 SGIRFQC   87 (99)
Q Consensus        81 ~~~~~~~   87 (99)
                      ++++...
T Consensus       231 ~ii~~~~  237 (254)
T d1xtpa_         231 RVVKEAF  237 (254)
T ss_dssp             CEEEEEE
T ss_pred             EEEEEEe
Confidence            9988765

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=3.7e-09  Score=67.51  Aligned_cols=72  Identities=17%  Similarity=0.273  Sum_probs=59.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      .++|++++++..++|+++++.| +|||.++|.|...++...          ++     .......||.++|.++|+++||
T Consensus       135 ~~l~h~~~~~~~~~l~~i~~~L-k~~G~~~i~~~~~~~~~~----------~~-----~~~~~~~~~~~~~~~l~~~aGf  198 (222)
T d2ex4a1         135 WVIGHLTDQHLAEFLRRCKGSL-RPNGIIVIKDNMAQEGVI----------LD-----DVDSSVCRDLDVVRRIICSAGL  198 (222)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEBSSSEE----------EE-----TTTTEEEEBHHHHHHHHHHTTC
T ss_pred             cccccchhhhhhhHHHHHHHhc-CCcceEEEEEcccccccc----------cc-----cCCceeeCCHHHHHHHHHHcCC
Confidence            4789999999999999999999 999999999987654311          11     0125678999999999999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      ++++....
T Consensus       199 ~ii~~~~q  206 (222)
T d2ex4a1         199 SLLAEERQ  206 (222)
T ss_dssp             CEEEEEEC
T ss_pred             EEEEEEEe
Confidence            99988764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=98.66  E-value=4.6e-08  Score=62.03  Aligned_cols=78  Identities=17%  Similarity=0.342  Sum_probs=55.0

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchH-hhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVF-MLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~-m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      +++|+.+|  -.++|+++++.| +|||+++|.+...+....   ..   ...+.. -.....+.+.++.++|.++|+++|
T Consensus        89 ~~l~~~~d--~~~~l~~~~r~L-kpgG~l~i~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG  159 (231)
T d1vl5a_          89 IAAHHFPN--PASFVSEAYRVL-KKGGQLLLVDNSAPENDA---FD---VFYNYVEKERDYSHHRAWKKSDWLKMLEEAG  159 (231)
T ss_dssp             SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEEEBCSSHH---HH---HHHHHHHHHHCTTCCCCCBHHHHHHHHHHHT
T ss_pred             ccccccCC--HHHHHHHHHHhc-CCCcEEEEEeCCCCCCHH---HH---HHHHHHHhhcccCcccCCCHHHHHHHHHHCC
Confidence            36888887  457899999999 999999999987664311   11   111111 111122456788999999999999


Q ss_pred             CCeeEEEE
Q 037161           80 FSGIRFQC   87 (99)
Q Consensus        80 f~~~~~~~   87 (99)
                      |+++++..
T Consensus       160 f~~~~~~~  167 (231)
T d1vl5a_         160 FELEELHC  167 (231)
T ss_dssp             CEEEEEEE
T ss_pred             CEEEEEEE
Confidence            99987654

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=98.59  E-value=5.1e-08  Score=61.14  Aligned_cols=78  Identities=18%  Similarity=0.209  Sum_probs=53.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      ++||+.+|  ..++|+++++.| +|||+++|.+...+..     ..... ..+..-.....+.+.+|.+++.++|+++||
T Consensus        99 ~~l~h~~d--~~~~l~~~~~~L-~pgG~l~i~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~s~~~l~~~l~~~Gf  169 (208)
T d1vlma_          99 TTICFVDD--PERALKEAYRIL-KKGGYLIVGIVDRESF-----LGREY-EKNKEKSVFYKNARFFSTEELMDLMRKAGF  169 (208)
T ss_dssp             SCGGGSSC--HHHHHHHHHHHE-EEEEEEEEEEECSSSH-----HHHHH-HHTTTC-CCSTTCCCCCHHHHHHHHHHTTC
T ss_pred             cccccccc--cccchhhhhhcC-CCCceEEEEecCCcch-----hHHhh-hhccccccccccccCCCHHHHHHHHHHcCC
Confidence            47889987  568999999999 9999999987543211     11000 011111111235677899999999999999


Q ss_pred             CeeEEEE
Q 037161           81 SGIRFQC   87 (99)
Q Consensus        81 ~~~~~~~   87 (99)
                      +++++..
T Consensus       170 ~~i~v~~  176 (208)
T d1vlma_         170 EEFKVVQ  176 (208)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEE
Confidence            9998775

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=98.41  E-value=4.4e-07  Score=59.44  Aligned_cols=77  Identities=16%  Similarity=0.247  Sum_probs=55.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      .++|+++|.  .++|++++++| +|||++++.+....+......   .....+...     .....|.++|.++++++||
T Consensus       143 ~~l~h~~d~--~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~s~~~~~~~l~~~Gf  211 (282)
T d2o57a1         143 DAFLHSPDK--LKVFQECARVL-KPRGVMAITDPMKEDGIDKSS---IQPILDRIK-----LHDMGSLGLYRSLAKECGL  211 (282)
T ss_dssp             SCGGGCSCH--HHHHHHHHHHE-EEEEEEEEEEEEECTTCCGGG---GHHHHHHHT-----CSSCCCHHHHHHHHHHTTE
T ss_pred             chhhhccCH--HHHHHHHHHhc-CCCcEEEEEEeecCCCCchhH---HHHHHHHhc-----cCCCCCHHHHHHHHHHcCC
Confidence            368889874  57999999999 999999999988776533221   112222211     2235688999999999999


Q ss_pred             CeeEEEEc
Q 037161           81 SGIRFQCF   88 (99)
Q Consensus        81 ~~~~~~~~   88 (99)
                      +.+.+...
T Consensus       212 ~~i~~~d~  219 (282)
T d2o57a1         212 VTLRTFSR  219 (282)
T ss_dssp             EEEEEEEC
T ss_pred             ceEEEEEC
Confidence            99888754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.34  E-value=8.2e-07  Score=56.54  Aligned_cols=78  Identities=19%  Similarity=0.282  Sum_probs=55.5

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhc-hHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQID-VFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~d-l~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      .++|+.+|  ..++|+++++.| +|||++++.|...++.+.   ..   ..++ +.........+.++..+|..+++++|
T Consensus        90 ~~l~~~~d--~~~~l~~~~r~L-kpgG~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  160 (234)
T d1xxla_          90 YAAHHFSD--VRKAVREVARVL-KQDGRFLLVDHYAPEDPV---LD---EFVNHLNRLRDPSHVRESSLSEWQAMFSANQ  160 (234)
T ss_dssp             SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECBCSSHH---HH---HHHHHHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred             ceeecccC--HHHHHHHHHHee-CCCcEEEEEEcCCCCCHH---HH---HHHHHHHhhCCCcccccCCHHHHHHHHHHCC
Confidence            36788877  679999999999 999999999987654321   11   1111 11111122678889999999999999


Q ss_pred             CCeeEEEE
Q 037161           80 FSGIRFQC   87 (99)
Q Consensus        80 f~~~~~~~   87 (99)
                      |.+..+..
T Consensus       161 f~~~~~~~  168 (234)
T d1xxla_         161 LAYQDIQK  168 (234)
T ss_dssp             EEEEEEEE
T ss_pred             CceeEEEE
Confidence            98877654

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.33  E-value=8.3e-07  Score=58.66  Aligned_cols=87  Identities=16%  Similarity=0.268  Sum_probs=61.8

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCC-----chhhhhhhhhchHhhhcCCCceecCHHHHHHHHH
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPEN-----SATSKANSQIDVFMLTHSPRGKVRTKHEFINLAT   76 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~-----~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~   76 (99)
                      ++++.+++.-..++++|++.| +|||+++|.+.+..++...     ..........|+..--.+++|...|.+++.+.++
T Consensus       126 ~~eh~~~~~~~~~f~~i~~~L-kpgG~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~dfI~kyifPgg~lPS~~~l~~~~e  204 (280)
T d2fk8a1         126 AFEHFGHENYDDFFKRCFNIM-PADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGE  204 (280)
T ss_dssp             CGGGTCGGGHHHHHHHHHHHS-CTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHH
T ss_pred             HHHHhhhhhHHHHHHHHHhcc-CCCceEEEEEeeccCcchhhhcccccccccccccchhhhhccCCCcccchHhhhhhHH
Confidence            577888888899999999999 9999999998765543110     0000111222333322245899999999999999


Q ss_pred             HcCCCeeEEEEcC
Q 037161           77 AAGFSGIRFQCFV   89 (99)
Q Consensus        77 ~aGf~~~~~~~~~   89 (99)
                      ++||++..+..++
T Consensus       205 ~aGf~v~~~~~~~  217 (280)
T d2fk8a1         205 KAGFTVPEPLSLR  217 (280)
T ss_dssp             HTTCBCCCCEECH
T ss_pred             hhccccceeeecc
Confidence            9999999887653

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.16  E-value=9.9e-06  Score=53.56  Aligned_cols=86  Identities=13%  Similarity=0.138  Sum_probs=58.3

Q ss_pred             cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCC-----CCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161            3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELP-----ENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA   77 (99)
Q Consensus         3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~-----~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~   77 (99)
                      +.+..+..-..++++|++.| +|||+++|.+.....+.     ..+.........+...--.+++|..-|..++..++++
T Consensus       137 ~eh~~~~~~~~~~~~~~r~L-kpgG~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~fi~kyiFpgg~lPsl~~~~~~~e~  215 (285)
T d1kpga_         137 FEHFGHERYDAFFSLAHRLL-PADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASA  215 (285)
T ss_dssp             GGGTCTTTHHHHHHHHHHHS-CTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHT
T ss_pred             hhhcCchhHHHHHHHHHhhc-CCCCcEEEEEEeccCchhhccccCCcchhhhchhhHHHHHhccCCCCCChhhHHHHHHH
Confidence            33455555678999999999 99999999998754321     1110111112223222222358999999999999999


Q ss_pred             cCCCeeEEEEcC
Q 037161           78 AGFSGIRFQCFV   89 (99)
Q Consensus        78 aGf~~~~~~~~~   89 (99)
                      +||++.++..++
T Consensus       216 agf~v~~~~~~~  227 (285)
T d1kpga_         216 NGFTVTRVQSLQ  227 (285)
T ss_dssp             TTCEEEEEEECH
T ss_pred             hchhhcccccch
Confidence            999999987763

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=3.3e-06  Score=54.06  Aligned_cols=76  Identities=12%  Similarity=0.079  Sum_probs=54.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|+++|  -.++|+++++.| +|||+++|.+......+....   .....    .. .......|..+|..+++++||+
T Consensus       109 ~~~~~~d--~~~~l~~~~r~L-kPGG~l~i~~~~~~~~~~~~~---~~~~~----~~-~~~~~~~~~~~~~~~~~~aG~~  177 (245)
T d1nkva_         109 ATWIAGG--FAGAEELLAQSL-KPGGIMLIGEPYWRQLPATEE---IAQAC----GV-SSTSDFLTLPGLVGAFDDLGYD  177 (245)
T ss_dssp             CGGGTSS--SHHHHHHHTTSE-EEEEEEEEEEEEETTCCSSHH---HHHTT----TC-SCGGGSCCHHHHHHHHHTTTBC
T ss_pred             hhhccCC--HHHHHHHHHHHc-CcCcEEEEEeccccCCCChHH---HHHHh----cc-CCCcccCCHHHHHHHHHHcCCE
Confidence            5788877  468999999999 999999999987665432211   11111    11 1134567999999999999999


Q ss_pred             eeEEEEc
Q 037161           82 GIRFQCF   88 (99)
Q Consensus        82 ~~~~~~~   88 (99)
                      ++.....
T Consensus       178 ~v~~~~~  184 (245)
T d1nkva_         178 VVEMVLA  184 (245)
T ss_dssp             CCEEEEC
T ss_pred             EEEEEeC
Confidence            9876543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.6e-06  Score=55.43  Aligned_cols=72  Identities=15%  Similarity=-0.038  Sum_probs=49.4

Q ss_pred             ccccC--ChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161            2 ILHAW--SDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         2 vlHdw--~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      +||+.  +.++-..+++++++.| +|||.+++.+..-.....     .    .+.  .  . .....|.++++++|++||
T Consensus       161 ~l~~~~~~~~~~~~~l~~i~~~L-kpGG~li~~~~~~~~~~~-----~----~~~--~--~-~~~~~~~~~~~~~l~~aG  225 (257)
T d2a14a1         161 AMECACCSLDAYRAALCNLASLL-KPGGHLVTTVTLRLPSYM-----V----GKR--E--F-SCVALEKGEVEQAVLDAG  225 (257)
T ss_dssp             CHHHHCSSHHHHHHHHHHHHTTE-EEEEEEEEEEESSCCEEE-----E----TTE--E--E-ECCCCCHHHHHHHHHHTT
T ss_pred             hHHHhcccHHHHHHHHHHHHhcc-CCCcEEEEEEecccccce-----e----ccc--c--c-cccCCCHHHHHHHHHHCC
Confidence            34544  3467889999999999 999999998864221100     0    000  0  0 123468999999999999


Q ss_pred             CCeeEEEEc
Q 037161           80 FSGIRFQCF   88 (99)
Q Consensus        80 f~~~~~~~~   88 (99)
                      |+++++...
T Consensus       226 f~v~~~~~~  234 (257)
T d2a14a1         226 FDIEQLLHS  234 (257)
T ss_dssp             EEEEEEEEE
T ss_pred             CEEEEEEEe
Confidence            999888644

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=97.81  E-value=7.8e-06  Score=53.56  Aligned_cols=84  Identities=18%  Similarity=0.179  Sum_probs=48.4

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC--------CCCCCchhhhhhhhhchH-hhhcCCCce-ecCHHH
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP--------ELPENSATSKANSQIDVF-MLTHSPRGK-VRTKHE   70 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~--------~~~~~~~~~~~~~~~dl~-m~~~~~~g~-~rt~~e   70 (99)
                      +++|+.+|.  .++|+++++.| +|||++++.|....        +............+..+. ..... .|+ .....+
T Consensus       102 ~~l~~~~d~--~~~l~~~~~~L-kpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~  177 (281)
T d2gh1a1         102 AFLLHMTTP--ETMLQKMIHSV-KKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQR-NGKDGNIGMK  177 (281)
T ss_dssp             SCGGGCSSH--HHHHHHHHHTE-EEEEEEEEEECCHHHHHTSEEETTSCHHHHCCHHHHHHHHHHHHHT-TCCCTTGGGT
T ss_pred             hhhhcCCCH--HHHHHHHHHHc-CcCcEEEEEECCccccchhhccCchhhhhhhhHHHHHHHHHHHHHH-cCCCCCHHHH
Confidence            478888885  47899999999 99999999995311        111000000111111111 11111 222 222346


Q ss_pred             HHHHHHHcCCCeeEEEEc
Q 037161           71 FINLATAAGFSGIRFQCF   88 (99)
Q Consensus        71 ~~~ll~~aGf~~~~~~~~   88 (99)
                      ...++++|||+.+++.-.
T Consensus       178 l~~~l~eaGf~~i~~~~~  195 (281)
T d2gh1a1         178 IPIYLSELGVKNIECRVS  195 (281)
T ss_dssp             HHHHHHHTTCEEEEEEEC
T ss_pred             HHHHHHHcCCeEEEEEEe
Confidence            788999999999887543

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.78  E-value=3.5e-05  Score=51.02  Aligned_cols=79  Identities=15%  Similarity=0.273  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCch-----hhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSA-----TSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR   84 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~-----~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~   84 (99)
                      .-.+++++|++.| +|||++++.....++......     ........++..--.+++|..-|.+++...++++||++..
T Consensus       150 ~~~~~f~~i~~~L-kpgG~~~l~~i~~~~~~~~~~~~~~~p~~~~~~~~fi~kyiFpgg~lps~~~~~~~~e~~gl~v~~  228 (291)
T d1kpia_         150 RYDTFFKKFYNLT-PDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVER  228 (291)
T ss_dssp             HHHHHHHHHHHTS-CTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHHHHhC-CCCCceEEEEEeccCcchhhhccCCCchhhcccchHHHHHhcCCCCCCCHHHHHhhhcccccccce
Confidence            3468999999999 999999999988765321000     0001112232222224589999999999999999999999


Q ss_pred             EEEcC
Q 037161           85 FQCFV   89 (99)
Q Consensus        85 ~~~~~   89 (99)
                      +..++
T Consensus       229 ~~~~~  233 (291)
T d1kpia_         229 YHRIG  233 (291)
T ss_dssp             EEECG
T ss_pred             eeecc
Confidence            87764

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.77  E-value=4.9e-05  Score=48.64  Aligned_cols=67  Identities=13%  Similarity=-0.009  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV   89 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~   89 (99)
                      +...+++++++.| +|||+++|.+.....+...++                    ..+.++..+.|+++||++++...+.
T Consensus       156 ~~~~~l~~~~r~L-KpgG~~~i~~k~~~~d~~~~~--------------------~~~~~e~~~~L~~aGF~ive~idL~  214 (230)
T d1g8sa_         156 QAEILIKNAKWFL-KKGGYGMIAIKARSIDVTKDP--------------------KEIFKEQKEILEAGGFKIVDEVDIE  214 (230)
T ss_dssp             HHHHHHHHHHHHE-EEEEEEEEEEEGGGTCSSSCH--------------------HHHHHHHHHHHHHHTEEEEEEEECT
T ss_pred             HHHHHHHHHHHhc-ccCceEEEEeeccccCCCCCH--------------------HHHHHHHHHHHHHcCCEEEEEecCC
Confidence            4778899999999 999999998865443322211                    1123688999999999999998875


Q ss_pred             C---CeeEEEE
Q 037161           90 C---NSWVMEF   97 (99)
Q Consensus        90 ~---~~~vie~   97 (99)
                      +   .+.++-+
T Consensus       215 py~~~H~~vvg  225 (230)
T d1g8sa_         215 PFEKDHVMFVG  225 (230)
T ss_dssp             TTSTTEEEEEE
T ss_pred             CCcCCeEEEEE
Confidence            4   3545443

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.3e-05  Score=52.05  Aligned_cols=64  Identities=11%  Similarity=0.095  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC   87 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~   87 (99)
                      ++-.+.|+++++.| +|||.+++.+..-... ..         ..-...    .....|.++++++|+++||+++++..
T Consensus       175 ~~~~~~l~~~~~~L-kPGG~li~~~~~~~~~-~~---------~~~~~~----~~~~~t~e~v~~~l~~aGf~v~~~~~  238 (263)
T d2g72a1         175 ASFQRALDHITTLL-RPGGHLLLIGALEESW-YL---------AGEARL----TVVPVSEEEVREALVRSGYKVRDLRT  238 (263)
T ss_dssp             HHHHHHHHHHHTTE-EEEEEEEEEEEESCCE-EE---------ETTEEE----ECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHc-CCCCEEEEecccCCcc-cc---------cCCccc----ccCCCCHHHHHHHHHHCCCeEEEEEE
Confidence            45789999999999 9999999988653211 00         000000    11246899999999999999987653

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.00024  Score=45.81  Aligned_cols=75  Identities=11%  Similarity=0.052  Sum_probs=49.7

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhch-HhhhcCCCceecCHHHHHHHHHHcC
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDV-FMLTHSPRGKVRTKHEFINLATAAG   79 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl-~m~~~~~~g~~rt~~e~~~ll~~aG   79 (99)
                      ++||+++|  -.+.|+++++.| +|||.++|...-   .. .. ..+.  ...+ ..+........++..+|.++|+++|
T Consensus       131 ~~l~~~~d--~~~~l~~l~~~L-kpgG~l~i~~~~---~~-~~-~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~L~~~G  200 (280)
T d1jqea_         131 QMLYYVKD--IPATLKFFHSLL-GTNAKMLIIVVS---GS-SG-WDKL--WKKYGSRFPQDDLCQYITSDDLTQMLDNLG  200 (280)
T ss_dssp             SCGGGCSC--HHHHHHHHHHTE-EEEEEEEEEEEC---TT-SH-HHHH--HHHHGGGSCCCTTSCCCCHHHHHHHHHHHT
T ss_pred             cceecCCC--HHHHHHHHHhhC-CCCCEEEEEEec---Cc-ch-HHHH--HHHHHHhcCCCcccccCCHHHHHHHHHHCC
Confidence            47888887  458999999999 999999987542   11 11 1110  1111 1111223566788999999999999


Q ss_pred             CCeeEE
Q 037161           80 FSGIRF   85 (99)
Q Consensus        80 f~~~~~   85 (99)
                      |+.+..
T Consensus       201 ~~~~~~  206 (280)
T d1jqea_         201 LKYECY  206 (280)
T ss_dssp             CCEEEE
T ss_pred             CceEEE
Confidence            986544

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=97.29  E-value=0.00033  Score=43.91  Aligned_cols=77  Identities=18%  Similarity=0.149  Sum_probs=48.9

Q ss_pred             CccccCChHHHHHHHHHHH-HhccCCCceEEEEeeecCCCCCCch----------hhhhhhhhchHhhhcCCCceecCHH
Q 037161            1 SILHAWSDEHCLKLLKNCY-ESINKEDGKLIVVEAVLPELPENSA----------TSKANSQIDVFMLTHSPRGKVRTKH   69 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~-~al~~pgg~l~I~e~~~~~~~~~~~----------~~~~~~~~dl~m~~~~~~g~~rt~~   69 (99)
                      +|||+.+|  -.++|++++ +.| +|||.++|.-+   .......          ........+.  .  ..+-+.+|.+
T Consensus        89 ~vleh~~d--~~~~l~~i~~~~L-k~gG~l~i~~p---n~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~h~~~~~~~  158 (225)
T d2p7ia1          89 HVLEHIDD--PVALLKRINDDWL-AEGGRLFLVCP---NANAVSRQIAVKMGIISHNSAVTEAEF--A--HGHRCTYALD  158 (225)
T ss_dssp             SCGGGCSS--HHHHHHHHHHTTE-EEEEEEEEEEE---CTTCHHHHHHHHTTSSSSTTCCCHHHH--H--TTCCCCCCHH
T ss_pred             ceeEecCC--HHHHHHHHHHHhc-CCCceEEEEeC---CcccHHHHHHHHhhhhhhhhhcCcccc--c--eeeeeccCHH
Confidence            47888887  467899998 678 99999998532   1111000          0000000111  1  1245678999


Q ss_pred             HHHHHHHHcCCCeeEEEE
Q 037161           70 EFINLATAAGFSGIRFQC   87 (99)
Q Consensus        70 e~~~ll~~aGf~~~~~~~   87 (99)
                      +++++++++||++++...
T Consensus       159 ~l~~~l~~~Gf~i~~~~~  176 (225)
T d2p7ia1         159 TLERDASRAGLQVTYRSG  176 (225)
T ss_dssp             HHHHHHHHTTCEEEEEEE
T ss_pred             HHHHHHHHCCCEEEEEEE
Confidence            999999999999987653

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.28  E-value=2.7e-05  Score=49.38  Aligned_cols=30  Identities=23%  Similarity=0.357  Sum_probs=26.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEE
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      ++|.++.++..+.|+++++.| +|||+++|.
T Consensus       115 ~~~~~~~~~~~~~L~~~~~~L-kpgG~lii~  144 (251)
T d1wzna1         115 TIMYFDEEDLRKLFSKVAEAL-KPGGVFITD  144 (251)
T ss_dssp             GGGGSCHHHHHHHHHHHHHHE-EEEEEEEEE
T ss_pred             hhhcCChHHHHHHHHHHHHHc-CCCcEEEEE
Confidence            566778888999999999999 999988874

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.23  E-value=9.3e-05  Score=46.93  Aligned_cols=29  Identities=21%  Similarity=0.257  Sum_probs=23.6

Q ss_pred             ccccC-ChHHHHHHHHHHHHhccCCCceEEE
Q 037161            2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIV   31 (99)
Q Consensus         2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I   31 (99)
                      ++|.+ +.++..++|+++++.| +|||.+++
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~L-kpgG~~i~  140 (246)
T d1y8ca_         111 STNYIIDSDDLKKYFKAVSNHL-KEGGVFIF  140 (246)
T ss_dssp             GGGGCCSHHHHHHHHHHHHTTE-EEEEEEEE
T ss_pred             eeeccCCHHHHHHHHHHHHHhC-CCCeEEEE
Confidence            34444 6778899999999999 99998775

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.13  E-value=0.00015  Score=44.75  Aligned_cols=34  Identities=15%  Similarity=0.178  Sum_probs=30.3

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +++|++++++..++|+++++.| +|||+++|....
T Consensus       110 ~~l~~~~~~d~~~~l~~i~~~L-kpgG~lii~~~~  143 (226)
T d1ve3a1         110 DSIVHFEPLELNQVFKEVRRVL-KPSGKFIMYFTD  143 (226)
T ss_dssp             SCGGGCCHHHHHHHHHHHHHHE-EEEEEEEEEEEC
T ss_pred             cchhhCChhHHHHHHHHHHHHc-CcCcEEEEEEcC
Confidence            4788999989999999999999 999999987754

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.83  E-value=0.0018  Score=38.67  Aligned_cols=35  Identities=3%  Similarity=-0.000  Sum_probs=30.5

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP   37 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~   37 (99)
                      ++|..+++.....++++++.| +|||++++.....+
T Consensus       108 ~l~~l~~~~~~~~~~~i~~~L-kpgG~l~l~~~~~~  142 (201)
T d1pjza_         108 AMIALPADMRERYVQHLEALM-PQACSGLLITLEYD  142 (201)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHS-CSEEEEEEEEESSC
T ss_pred             eeEecchhhhHHHHHHHHHhc-CCCcEEEEEEcccc
Confidence            678889999999999999999 99999988776544

>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Chemotaxis receptor methyltransferase CheR, C-terminal domain
domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.73  E-value=0.00031  Score=43.48  Aligned_cols=31  Identities=16%  Similarity=0.257  Sum_probs=28.6

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEE
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      |||+.++++...++|++++++| +|||.|+|-
T Consensus       140 NVLiYf~~~~~~~vl~~l~~~L-~pGG~L~lG  170 (193)
T d1af7a2         140 NVMIYFDKTTQEDILRRFVPLL-KPDGLLFAG  170 (193)
T ss_dssp             SSGGGSCHHHHHHHHHHHGGGE-EEEEEEEEC
T ss_pred             hhHHhcCHHHHHHHHHHHHHHh-CCCcEEEEe
Confidence            6899999999999999999999 999987764

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.52  E-value=0.0041  Score=39.31  Aligned_cols=76  Identities=12%  Similarity=-0.011  Sum_probs=47.4

Q ss_pred             ccccCC-hHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161            2 ILHAWS-DEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF   80 (99)
Q Consensus         2 vlHdw~-d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf   80 (99)
                      |++|.+ .++...+++++++.| +|||+++|...-...+...+                    .+....+..+++ ++||
T Consensus       147 i~~d~~~~~~~~~~l~~~~~~L-kpgG~lvi~~ka~~~~~~~~--------------------~~~v~~~v~~l~-~~gf  204 (227)
T d1g8aa_         147 IFEDVAQPTQAKILIDNAEVYL-KRGGYGMIAVKSRSIDVTKE--------------------PEQVFREVEREL-SEYF  204 (227)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHE-EEEEEEEEEEEGGGTCTTSC--------------------HHHHHHHHHHHH-HTTS
T ss_pred             EEEEccccchHHHHHHHHHHhc-ccCCeEEEEEECCccCCCCC--------------------HHHHHHHHHHHH-HcCC
Confidence            344443 245778999999999 99999998754322111111                    111122344444 5699


Q ss_pred             CeeEEEEcCC---CeeEEEEEC
Q 037161           81 SGIRFQCFVC---NSWVMEFYK   99 (99)
Q Consensus        81 ~~~~~~~~~~---~~~vie~~k   99 (99)
                      ++.+...+.+   .+.++-++|
T Consensus       205 ~iie~i~L~p~~~~H~~vv~rK  226 (227)
T d1g8aa_         205 EVIERLNLEPYEKDHALFVVRK  226 (227)
T ss_dssp             EEEEEEECTTTSSSEEEEEEEC
T ss_pred             EEEEEEcCCCCCCceEEEEEEe
Confidence            9999888754   467787776

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0051  Score=38.32  Aligned_cols=65  Identities=6%  Similarity=-0.114  Sum_probs=46.4

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS   81 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~   81 (99)
                      ++|..+.++-.+.+++++++| +|||++++.....+......                  .-...|.+|+.++|+. +|.
T Consensus       138 ~l~~~~~~~r~~~~~~~~~~L-kpgG~~~l~~~~~~~~~~~g------------------pp~~~~~~el~~lf~~-~~~  197 (229)
T d2bzga1         138 ALVAINPGDRKCYADTMFSLL-GKKFQYLLCVLSYDPTKHPG------------------PPFYVPHAEIERLFGK-ICN  197 (229)
T ss_dssp             STTTSCGGGHHHHHHHHHHTE-EEEEEEEEEEEECCTTTCCC------------------SSCCCCHHHHHHHHTT-TEE
T ss_pred             EEEeccchhhHHHHHHHHhhc-CCcceEEEEEcccCCCCCCC------------------CCCCCCHHHHHHHhcC-CCE
Confidence            578899999999999999999 99999888776544321110                  0012467889999965 676


Q ss_pred             eeEEE
Q 037161           82 GIRFQ   86 (99)
Q Consensus        82 ~~~~~   86 (99)
                      +..+.
T Consensus       198 i~~le  202 (229)
T d2bzga1         198 IRCLE  202 (229)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            65554

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.25  E-value=0.0074  Score=38.72  Aligned_cols=65  Identities=11%  Similarity=0.053  Sum_probs=46.0

Q ss_pred             ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161            4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI   83 (99)
Q Consensus         4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~   83 (99)
                      -+...+...++++.+++.| +|||++++.+...+                             ..+++.+.++++||+.+
T Consensus       190 ani~~~~l~~l~~~~~~~L-kpGG~lilSgil~~-----------------------------~~~~v~~~~~~~Gf~~~  239 (254)
T d2nxca1         190 ANLYAELHAALAPRYREAL-VPGGRALLTGILKD-----------------------------RAPLVREAMAGAGFRPL  239 (254)
T ss_dssp             EECCHHHHHHHHHHHHHHE-EEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTCEEE
T ss_pred             hccccccHHHHHHHHHHhc-CCCcEEEEEecchh-----------------------------hHHHHHHHHHHCCCEEE
Confidence            3445566788999999999 99999998654211                             13577888999999998


Q ss_pred             EEEEcCCCeeEEEEEC
Q 037161           84 RFQCFVCNSWVMEFYK   99 (99)
Q Consensus        84 ~~~~~~~~~~vie~~k   99 (99)
                      +....+. ...+.++|
T Consensus       240 ~~~~~~~-Wv~l~~~r  254 (254)
T d2nxca1         240 EEAAEGE-WVLLAYGR  254 (254)
T ss_dssp             EEEEETT-EEEEEEEC
T ss_pred             EEEEECC-EEEEEEeC
Confidence            8776644 34444443

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.12  E-value=0.0017  Score=39.65  Aligned_cols=34  Identities=18%  Similarity=0.222  Sum_probs=30.6

Q ss_pred             CccccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +++|..++++..++|++++++| +|||.+++....
T Consensus       103 ~~~~~~~~~~~~~~l~~~~~~L-~pgG~~~~~~~~  136 (198)
T d2i6ga1         103 VVMMFLEAQTIPGLIANMQRCT-KPGGYNLIVAAM  136 (198)
T ss_dssp             SCGGGSCTTHHHHHHHHHHHTE-EEEEEEEEEEEB
T ss_pred             eeeecCCHHHHHHHHHHHHHHc-CCCcEEEEEEec
Confidence            3789899999999999999999 999999998765

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=95.94  E-value=0.0051  Score=38.84  Aligned_cols=30  Identities=17%  Similarity=0.180  Sum_probs=24.6

Q ss_pred             ccccC--ChHHHHHHHHHHHHhccCCCceEEEE
Q 037161            2 ILHAW--SDEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         2 vlHdw--~d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      ++|..  +.++..++|+++++.| +|||++++.
T Consensus       102 ~l~~~~~~~~~~~~~l~~i~~~L-k~gG~~i~~  133 (252)
T d1ri5a_         102 SFHYAFSTSESLDIAQRNIARHL-RPGGYFIMT  133 (252)
T ss_dssp             CGGGGGSSHHHHHHHHHHHHHTE-EEEEEEEEE
T ss_pred             eeeecCCCHHHHHHHHHHHhcee-CCCCEEEEE
Confidence            46664  5567889999999999 999998774

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.98  E-value=0.013  Score=37.67  Aligned_cols=22  Identities=23%  Similarity=0.311  Sum_probs=19.6

Q ss_pred             HHHHHHHHHHHHhccCCCceEEE
Q 037161            9 EHCLKLLKNCYESINKEDGKLIV   31 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I   31 (99)
                      ++..++|+++++.| +|||.+++
T Consensus       151 ~~~~~~l~~~~~~L-kpgG~li~  172 (292)
T d1xvaa_         151 SEHRLALKNIASMV-RPGGLLVI  172 (292)
T ss_dssp             HHHHHHHHHHHHTE-EEEEEEEE
T ss_pred             HHHHHHHHHHHHHc-CcCcEEEE
Confidence            56889999999999 99998766

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=93.89  E-value=0.0078  Score=37.12  Aligned_cols=29  Identities=21%  Similarity=0.223  Sum_probs=23.9

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      ++|+.+|.  .++|+++++.| +|||.+++..
T Consensus       112 ~~~~~~d~--~~~l~~i~r~L-k~gG~~ii~~  140 (246)
T d2avna1         112 VLSYVENK--DKAFSEIRRVL-VPDGLLIATV  140 (246)
T ss_dssp             HHHHCSCH--HHHHHHHHHHE-EEEEEEEEEE
T ss_pred             hhhhhhhH--HHHHHHHHhhc-CcCcEEEEEE
Confidence            67777775  46899999999 9999888754

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.0043  Score=38.81  Aligned_cols=61  Identities=10%  Similarity=0.032  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEE
Q 037161           10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQ   86 (99)
Q Consensus        10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~   86 (99)
                      +-...++++++.| +|||++++.+..-...             .+  -....+......+.+...+.++||+...+.
T Consensus       141 ~~~~~~~~~~r~L-kpGG~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~~~~~~l~~agF~~~~i~  201 (229)
T d1zx0a1         141 QFNFIKNHAFRLL-KPGGVLTYCNLTSWGE-------------LM--KSKYSDITIMFEETQVPALLEAGFRRENIR  201 (229)
T ss_dssp             HHHHHHHTHHHHE-EEEEEEEECCHHHHHH-------------HT--TTTCSCHHHHHHHHTHHHHHHTTCCGGGEE
T ss_pred             CHHHHHHHHHHHc-CCCcEEEEEecCCcch-------------hh--hhhhhhcchhhhhHHHHHHHHCCCeeEEEE
Confidence            3667999999999 9999887643221100             00  000012222334566778889999987664

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.89  E-value=0.091  Score=35.74  Aligned_cols=31  Identities=19%  Similarity=0.204  Sum_probs=25.8

Q ss_pred             hHHHHHHHHHHHHhccCCCceEEEEeeecCCC
Q 037161            8 DEHCLKLLKNCYESINKEDGKLIVVEAVLPEL   39 (99)
Q Consensus         8 d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~   39 (99)
                      +++..+.|+++++.| +|||+|++.|.+.+..
T Consensus       309 ~~~l~~~L~ei~r~L-KPGGrIVs~~~~~~~~  339 (406)
T d1u2za_         309 DEDLNKKVEKILQTA-KVGCKIISLKSLRSLT  339 (406)
T ss_dssp             CHHHHHHHHHHHTTC-CTTCEEEESSCSSCTT
T ss_pred             chHHHHHHHHHHHhc-CCCcEEEEecccCCCc
Confidence            345778899999999 9999999998776644

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=89.83  E-value=0.03  Score=35.98  Aligned_cols=29  Identities=21%  Similarity=0.521  Sum_probs=24.1

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVE   33 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e   33 (99)
                      |++|.+|.  .++|++++++| +|||+++++-
T Consensus       176 V~~d~p~p--~~~l~~~~~~L-KpGG~lv~~~  204 (266)
T d1o54a_         176 LFLDVPDP--WNYIDKCWEAL-KGGGRFATVC  204 (266)
T ss_dssp             EEECCSCG--GGTHHHHHHHE-EEEEEEEEEE
T ss_pred             eEecCCCH--HHHHHHHHhhc-CCCCEEEEEe
Confidence            57788774  46799999999 9999999864

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.60  E-value=0.089  Score=32.33  Aligned_cols=26  Identities=19%  Similarity=0.230  Sum_probs=22.2

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      .+...+|+++++.| +|||+++|.+..
T Consensus       137 ~~~~~~l~~~~~~L-kpgG~l~i~~~~  162 (209)
T d1nt2a_         137 NQIEILKANAEFFL-KEKGEVVIMVKA  162 (209)
T ss_dssp             THHHHHHHHHHHHE-EEEEEEEEEEEH
T ss_pred             hhHHHHHHHHHHHh-ccCCeEEEEEEc
Confidence            34678899999999 999999998753

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.59  E-value=0.17  Score=33.08  Aligned_cols=30  Identities=20%  Similarity=0.352  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeecCCC
Q 037161            9 EHCLKLLKNCYESINKEDGKLIVVEAVLPEL   39 (99)
Q Consensus         9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~   39 (99)
                      ++..+.|+++++.| +|||++++.+.+.+..
T Consensus       243 ~~~~~~l~e~~r~L-KpGg~iv~~~~~~~~~  272 (328)
T d1nw3a_         243 PEVDHQLKERFANM-KEGGRIVSSKPFAPLN  272 (328)
T ss_dssp             HHHHHHHHHHHTTC-CTTCEEEESSCSSCTT
T ss_pred             hHHHHHHHHHHHhC-CCCcEEEEecccCCCC
Confidence            34567899999999 9999999988776644

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.53  E-value=0.2  Score=29.87  Aligned_cols=26  Identities=23%  Similarity=0.383  Sum_probs=21.9

Q ss_pred             CChHHHHHHHHHHHHhccCCCceEEEE
Q 037161            6 WSDEHCLKLLKNCYESINKEDGKLIVV   32 (99)
Q Consensus         6 w~d~~~~~iL~~~~~al~~pgg~l~I~   32 (99)
                      +..+...++++++.+.| +|||+++|.
T Consensus       131 ~~~~~~~~~l~~~~~~L-kpgG~l~i~  156 (194)
T d1dusa_         131 AGKEVLHRIIEEGKELL-KDNGEIWVV  156 (194)
T ss_dssp             TCHHHHHHHHHHHHHHE-EEEEEEEEE
T ss_pred             ecchhhhhHHHHHHHhc-CcCcEEEEE
Confidence            45666788999999999 999998874

>d2uyoa1 c.66.1.57 (A:14-310) Putative methyltransferase ML2640 {Mycobacterium leprae [TaxId: 1769]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: ML2640-like
domain: Putative methyltransferase ML2640
species: Mycobacterium leprae [TaxId: 1769]

Probab=82.38  E-value=0.81  Score=29.45  Aligned_cols=32  Identities=13%  Similarity=0.013  Sum_probs=27.0

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV   35 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~   35 (99)
                      +++..+.+++.++|+.+.+.. +||+.|++ |.+
T Consensus       175 vl~YL~~~~~~~ll~~i~~~~-~~GS~l~~-d~~  206 (297)
T d2uyoa1         175 LLMYLPATAQDGLFTEIGGLS-AVGSRIAV-ETS  206 (297)
T ss_dssp             CGGGSCHHHHHHHHHHHHHTC-CTTCEEEE-ECC
T ss_pred             ccccCCHHHHHHHHHHHHHhC-CCCCEEEE-Eec
Confidence            678899999999999999988 89887654 654

>d1rjda_ c.66.1.37 (A:) Leucine carboxy methyltransferase Ppm1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Leucine carboxy methyltransferase Ppm1
domain: Leucine carboxy methyltransferase Ppm1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.20  E-value=2  Score=27.95  Aligned_cols=38  Identities=13%  Similarity=0.209  Sum_probs=31.7

Q ss_pred             ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCC
Q 037161            2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPE   41 (99)
Q Consensus         2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~   41 (99)
                      ||...+.+++.++|+.+.+..  |+|.++++|.+.+..+.
T Consensus       202 vl~Yl~~~~~~~li~~~~~~f--~~~~~i~YE~i~~~~p~  239 (328)
T d1rjda_         202 LLCYMHNNESQLLINTIMSKF--SHGLWISYDPIGGSQPN  239 (328)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHC--SSEEEEEEEECCCCSTT
T ss_pred             ehhcCCHHHHHHHHHHHHHhC--CCceEEEeccCCCCCCC
Confidence            678889999999999999877  66889999999765443