Citrus Sinensis ID: 037376


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610--
MASFHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYSSELPTLHLNTTQIPPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNSESAGSGFSESSLKNLQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKGTEPHLDPSLLKIKASAS
cccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccEEEEEEEEEcccccccccEEEEEccccccccccccEEEEEEEEEEEccccEEEEEEEEccEEEEEEccccccccccEEEEEEcccccccEEcccccEEEEEEEccEEccEEEEEEEEEEEEEEEcccccccccccccccccccccccccEEEEcccccccccccEEEEcccccccEEEEEcccccEEEEEEEEEEcccccEEEcccccHHHHHcccccccccccccEEEEEEEccEEEEEEccccEEEccccccccccccccccccccccEEEEcccccccccccccEEEEEEEEcccccEEEEEEEEEEEEccccEEEEEEEEEEccccEEEEEccccccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEEEccEEEEEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEcEEEEcccccEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEcccccEEEEEEEEccEEEEEcccccccccccccccccccccccccc
ccccHHHHHHHHHHHHHHccccccccccccHHHcccccccHHcccccccccccccccEEEEEcccccccccccEEEEEEEEccccccccccEEEEcccccccccccccEEEEEEEEEEcccEccEEEEEEEcccEEEEccccccccccEEEEEEccHHHHHHHHHcccccEEEEEEcccEcccEEEEEEEEEEEEEEcccccccccccccccccccccccccEEEEEccccccccccEEEEEccccccEEEEEcccccEEEEEEEEEEcccccEEEEEccccHHHcccccccccccccEEEEEEEEccEEEEEEccccEEEEccccccccccccccccccccccEEEEcccHHHHccccccEEEEEEEccccEEEEEEEEEEEEcccccccccEEEEEccccccEEEcccccccccEEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEcccccEEEEEEEEEcccEEEEEccccEEEEEEEEEEEEEEEEEcccccccccEEEEEEEEEEEccEEEccccccccEEEEEEcEcccEEEEEEcccEEEEEEEEEEEEEEEccccEEEEEEEEEccEEEEEccccccccccccccccccEEEEcccc
MASFHFPLFLCISLFLlhqtqpinanlHKTKTlfrnsnlysselptlhlnttqipptryfevtkpieipktnpcshhilhhdfaftygkppvlanytppshcsskkVSKIVLEWNatckgrqfdriFGVWLGGVELLRsctaepratgiVWSVKKDLTRYHSLLVKNETQTFAVYLGNlvdstytgvyhVDITlyfypadvdindheydsdvlasgygskadliwpisrnlplndglwfeienstdigvkefvipqNVYRAVLEVYVSFhendefwysnvpndyiaannltdtpgngpfREVVVSLdgevvgavWPFTVVftgginpllwrpitaigsfdlptydieitpflgnlldgkthkfgFSVTNALNVWYIDANLHLwldgrsaktegkllkhssvpLQVYlesnfkgldgtfltnVNRSISSLgwvesshgkitTHFIqdfaysnsmvmgnsgnlqivnqtIHFDDTVsaemqssnayftksfkvfpfymysntedkgngtSLSLANVTlgfneknsesagsgfsesslknlqngqgvmfvknnlvisglgstqqvyhyhgdnfcyfrnisssnytILYDKVINKcekgtephldpslLKIKASAS
MASFHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYSSELPtlhlnttqippTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRsctaepratgivwsvkkDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNSESAGSGFSESSLKNLQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKgtephldpsllkikasas
MASFHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYSSELPTLHLNTTQIPPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNsesagsgfsessLKNLQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKGTEPHLDPSLLKIKASAS
***FHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYSSELPTLHLNTTQIPPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPFYMYSNT************NV***************************QGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCE*******************
***FHFPLFLCISLFLLHQTQPINANLHK***************************TRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADV****************GSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGR***************************DGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIH*************AYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNS******FSESSLKNLQNGQGVMF*********LGSTQQVYHYHGDNFCYFRNISSSNYTILYDK*******************IK****
MASFHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYSSELPTLHLNTTQIPPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYT********KVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEK***********SSLKNLQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKGTEPHLDPSLLKIKASAS
**SFHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYSSEL*******TQIPPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNSESAGSGFSESSLKNLQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKG**PHLDPSL*KIK****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASFHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYSSELPTLHLNTTQIPPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNSESAGSGFSESSLKNLQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKGTEPHLDPSLLKIKASAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query612 2.2.26 [Sep-21-2011]
P81898571 Peptide-N4-(N-acetyl-beta N/A no 0.895 0.959 0.712 0.0
>sp|P81898|PNAA_PRUDU Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis PE=1 SV=2 Back     alignment and function desciption
 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/553 (71%), Positives = 453/553 (81%), Gaps = 5/553 (0%)

Query: 55  PPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEW 114
           PPT +FEVTKPIE+PKT PCS  IL HDFA+TYG+ PV ANYTPPS C S+  S IVLEW
Sbjct: 9   PPTVFFEVTKPIEVPKTKPCSQLILQHDFAYTYGQAPVFANYTPPSDCPSQTFSTIVLEW 68

Query: 115 NATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAV 174
            ATC+ RQFDRIFGVWLGGVE+LRSCTAEPR  GIVW+V+KD+TRY+SLL  N  QT AV
Sbjct: 69  KATCRRRQFDRIFGVWLGGVEILRSCTAEPRPNGIVWTVEKDITRYYSLLKSN--QTLAV 126

Query: 175 YLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLN 234
           YLGNL+D TYTG+YHV+I+L+FYPA   +N  +   D LASGY S ADLI PISRNLPLN
Sbjct: 127 YLGNLIDKTYTGIYHVNISLHFYPAKEKLNSFQQKLDNLASGYHSWADLILPISRNLPLN 186

Query: 235 DGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTP 294
           DGLWFE++NS D  +KEF IPQN YRAVLEVYVSFHENDEFWYSN+PN+YIAANNL+ TP
Sbjct: 187 DGLWFEVQNSNDTELKEFKIPQNAYRAVLEVYVSFHENDEFWYSNLPNEYIAANNLSGTP 246

Query: 295 GNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGN 354
           GNGPFREVVVSLDGEVVGAVWPFTV+FTGGINPLLWRPITAIGSFDLPTYDIEITPFLG 
Sbjct: 247 GNGPFREVVVSLDGEVVGAVWPFTVIFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGK 306

Query: 355 LLDGKTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGL 414
           +LDGK+HKFGF+VTNALNVWY+DANLHLWLD +S KTEGKL KHSS+PL V L S+FKGL
Sbjct: 307 ILDGKSHKFGFNVTNALNVWYVDANLHLWLDKQSTKTEGKLSKHSSLPLVVSLVSDFKGL 366

Query: 415 DGTFLTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTV 474
           +GTFLT  +RS+SS GWV+SS+G ITT  IQDF YSNSMV+G  GN+QIVNQ I F+D+V
Sbjct: 367 NGTFLTRTSRSVSSTGWVKSSYGNITTRSIQDFYYSNSMVLGKDGNMQIVNQKIIFNDSV 426

Query: 475 SAEMQSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNSESAGSGFSESS 534
              + SS  +   S K FP Y+Y++   +GNGT L + NV LGF EK S   G GFS SS
Sbjct: 427 YINLPSSYVHSLTSHKTFPLYLYTDFLGQGNGTYLLITNVDLGFIEKKS---GLGFSNSS 483

Query: 535 LKNLQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEK 594
           L+NL++ +G M VKNNLV+SGL STQQ+Y Y G  FCYFRNISSSNYTILYDKV +KC K
Sbjct: 484 LRNLRSAEGNMVVKNNLVVSGLESTQQIYRYDGGKFCYFRNISSSNYTILYDKVGSKCNK 543

Query: 595 GTEPHLDPSLLKI 607
            +  +LD  L ++
Sbjct: 544 KSLSNLDFVLSRL 556





Prunus dulcis (taxid: 3755)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 5EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query612
224114784631 predicted protein [Populus trichocarpa] 0.967 0.938 0.705 0.0
255567074624 Peptide-N4-(N-acetyl-beta-glucosaminyl)a 0.936 0.918 0.694 0.0
56405352571 RecName: Full=Peptide-N4-(N-acetyl-beta- 0.895 0.959 0.712 0.0
225461673612 PREDICTED: peptide-N4-(N-acetyl-beta-glu 0.921 0.921 0.689 0.0
449456711624 PREDICTED: peptide-N4-(N-acetyl-beta-glu 0.929 0.911 0.678 0.0
449516754622 PREDICTED: peptide-N4-(N-acetyl-beta-glu 0.929 0.914 0.677 0.0
356514559604 PREDICTED: peptide-N4-(N-acetyl-beta-glu 0.941 0.953 0.628 0.0
15232438609 Peptide-N4-(N-acetyl-beta-glucosaminyl)a 0.949 0.954 0.627 0.0
356545237599 PREDICTED: peptide-N4-(N-acetyl-beta-glu 0.957 0.978 0.609 0.0
147857525581 hypothetical protein VITISV_039311 [Viti 0.870 0.917 0.654 0.0
>gi|224114784|ref|XP_002316856.1| predicted protein [Populus trichocarpa] gi|222859921|gb|EEE97468.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/602 (70%), Positives = 474/602 (78%), Gaps = 10/602 (1%)

Query: 4   FHFPLFLCISLFLLHQTQPINANLHKTKTLFRNSNLYS-----SELPTLHLNTTQIPPTR 58
           FH P      +FLLH      AN+HKT  L + S+L++     ++    H      PPT 
Sbjct: 6   FHLPFLF---VFLLHPLSST-ANIHKTNNLLK-SHLFTEPTSITKTHPAHKPLNDTPPTV 60

Query: 59  YFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATC 118
           +FEVTKPI++P T PC H IL HDFA TYGKPPVL NYTPPSHC S+  SKIVLEW ATC
Sbjct: 61  FFEVTKPIDVPNTKPCKHFILQHDFASTYGKPPVLVNYTPPSHCPSQDFSKIVLEWKATC 120

Query: 119 KGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGN 178
           KGRQFDRIFGVWLGGVELLRSCTAEPRATGIVW+V+KD+TRY+SLLVKNETQ FAVY+GN
Sbjct: 121 KGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWTVRKDITRYYSLLVKNETQEFAVYMGN 180

Query: 179 LVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPISRNLPLNDGLW 238
           +VDSTYTG+YHV++++YFYPA+  ++  ++  + LASG  SKADLI PISRN PLNDG W
Sbjct: 181 IVDSTYTGIYHVNVSIYFYPAEKKLSHSDHGFNNLASGRDSKADLILPISRNFPLNDGFW 240

Query: 239 FEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGP 298
           FEI+NSTD   KEF IPQNVYRAVLEVYVSFHENDEFWY N PN+YI ANNLT  PGNGP
Sbjct: 241 FEIQNSTDSEAKEFKIPQNVYRAVLEVYVSFHENDEFWYGNYPNEYIIANNLTGFPGNGP 300

Query: 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDG 358
           FREVVVSLDGE+VGAVWPFTVVFTGGINPLLWRPITAIGSFDLP+YDIEITPFLGN+LDG
Sbjct: 301 FREVVVSLDGEIVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPSYDIEITPFLGNILDG 360

Query: 359 KTHKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTF 418
           KTHK GFSVTNALNVWYIDANLHLWLD RS  TEGKLLKH S PL + L SNF GL+G F
Sbjct: 361 KTHKLGFSVTNALNVWYIDANLHLWLDHRSTITEGKLLKHESKPLALSLVSNFTGLNGKF 420

Query: 419 LTNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEM 478
           LT+  R ISS GWV+SSHG ITT F Q F Y N M MG  G+LQIVNQTI F D VS   
Sbjct: 421 LTSARRFISSNGWVKSSHGNITTRFNQHFGYRNLMEMGKDGDLQIVNQTIKFTDNVSFRK 480

Query: 479 QSSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNSESAGSGFSESSLKNL 538
            SSN    KS K F F MYS+  D+GNGTSLS+ANVTLGFNEKN + AG GF+ + L+NL
Sbjct: 481 PSSNVKAFKSLKNFEFDMYSDYMDQGNGTSLSVANVTLGFNEKNVKHAGLGFASNILRNL 540

Query: 539 QNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKGTEP 598
           QNGQGVM VKNNLV SG+GSTQQ Y Y+G  FCYFRNISSSNYTIL D V N C +    
Sbjct: 541 QNGQGVMVVKNNLVQSGMGSTQQEYTYNGSGFCYFRNISSSNYTILDDNVGNTCSERNHS 600

Query: 599 HL 600
           HL
Sbjct: 601 HL 602




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567074|ref|XP_002524519.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, putative [Ricinus communis] gi|223536193|gb|EEF37846.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|56405352|sp|P81898.2|PNAA_PRUDU RecName: Full=Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A; Short=PNGase A; AltName: Full=Glycopeptide N-glycosidase; AltName: Full=N-glycanase; Contains: RecName: Full=Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A light chain; AltName: Full=PNGase A small chain; AltName: Full=PNGase A subunit B; Contains: RecName: Full=Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A heavy chain; AltName: Full=PNGase A large chain; Short=PNGase A subunit A Back     alignment and taxonomy information
>gi|225461673|ref|XP_002285454.1| PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449456711|ref|XP_004146092.1| PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449516754|ref|XP_004165411.1| PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356514559|ref|XP_003525973.1| PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Glycine max] Back     alignment and taxonomy information
>gi|15232438|ref|NP_188110.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [Arabidopsis thaliana] gi|8777475|dbj|BAA97055.1| unnamed protein product [Arabidopsis thaliana] gi|332642067|gb|AEE75588.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356545237|ref|XP_003541051.1| PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Glycine max] Back     alignment and taxonomy information
>gi|147857525|emb|CAN82504.1| hypothetical protein VITISV_039311 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query612
TAIR|locus:2086285609 AT3G14920 "AT3G14920" [Arabido 0.941 0.945 0.624 6.1e-197
TAIR|locus:2169662608 AT5G05480 "AT5G05480" [Arabido 0.879 0.884 0.385 3.5e-98
UNIPROTKB|G4NEC0800 MGG_00799 "Peptide-N4-(N-acety 0.580 0.443 0.348 8.2e-53
ASPGD|ASPL0000031607661 AN10715 [Emericella nidulans ( 0.447 0.414 0.303 4.3e-42
CGD|CAL0005876 983 PNG2 [Candida albicans (taxid: 0.243 0.151 0.320 2.4e-26
UNIPROTKB|Q59T41 983 PNG2 "Putative uncharacterized 0.243 0.151 0.320 2.4e-26
TAIR|locus:2086285 AT3G14920 "AT3G14920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1907 (676.4 bits), Expect = 6.1e-197, P = 6.1e-197
 Identities = 374/599 (62%), Positives = 447/599 (74%)

Query:     7 PLFLCISLFLLHQTQPINANLHKTKTLFRN---SNLYSSELPTLHLNTTQIPPTRYFEVT 63
             PL    ++F +H    ++ +LH+T++ F+    S L+ S LP    N T+  PTRYFEV 
Sbjct:     7 PLIFFFTVFFVHSLSAVS-DLHETRSRFKPPQFSPLFFSSLPQ---NVTK-SPTRYFEVQ 61

Query:    64 KPI--EIPKTN-PCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKG 120
             KP    +P    PCS+ ILHHDF +TY KPPVL+NYT PSHCSS++ SKIVLE+ +T +G
Sbjct:    62 KPPVPNLPTAQQPCSYQILHHDFGYTYAKPPVLSNYTLPSHCSSREFSKIVLEFKSTSQG 121

Query:   121 RQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLV 180
             RQFDRIFGVWL GVE+LRSCTAEPR  GIVWSV+KD+T+YHSLLVKNETQ  +VYLGNL+
Sbjct:   122 RQFDRIFGVWLDGVEILRSCTAEPRPNGIVWSVEKDVTKYHSLLVKNETQILSVYLGNLI 181

Query:   181 DSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGS-KADLIWPISRNLPLNDGLWF 239
             D TYTGVYHVD+  +FY ++ ++ D         SGY S KAD+I PISRNLPLNDGLWF
Sbjct:   182 DKTYTGVYHVDVIFHFYQSESNLQD--------VSGYSSSKADMILPISRNLPLNDGLWF 233

Query:   240 EIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPF 299
             EI NS D   KEF IP+NVYRAVLEVYVSFHENDEFWY N+PNDY+ ANNL+   GNGPF
Sbjct:   234 EIVNSNDTKYKEFEIPRNVYRAVLEVYVSFHENDEFWYGNLPNDYVTANNLS-VAGNGPF 292

Query:   300 REVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGK 359
             REVVVSLDG++ GAVWPF VVFTGGINPLLWRPITAIGSFDLP+YDIEITPFLG+LLDGK
Sbjct:   293 REVVVSLDGDIAGAVWPFPVVFTGGINPLLWRPITAIGSFDLPSYDIEITPFLGSLLDGK 352

Query:   360 THKFGFSVTNALNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESNFKGLDGTFL 419
             THK GFSVTNALNVWYIDANLHLWLD      EGK+L  S   L++   S+FKGL+G F 
Sbjct:   353 THKVGFSVTNALNVWYIDANLHLWLDQEKEIVEGKVLDFSRSSLEISSVSDFKGLNGNFT 412

Query:   420 TNVNRSISSLGWVESSHGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQ 479
             T   RSI+S+G V+SSHG I T+  Q+F+Y N MV+G  GNLQI++Q I  DD + A+  
Sbjct:   413 TKAKRSITSVGLVKSSHGDIITNANQEFSYENKMVLGKDGNLQIIDQLIQADDRIHAKRA 472

Query:   480 SSNAYFTKSFKVFPFYMYSNTEDKGNGTSLSLANVTLGFNEKNXXXXXXXXXX--XXLKN 537
             S   Y  KS K FPFY+ S+T ++ N T L++ANV++ FNE+               L+N
Sbjct:   473 SREIYAAKSIKSFPFYLDSDTLEQQNNTYLAVANVSMAFNEERSESDKGLMRTFKSKLEN 532

Query:   538 LQNGQGVMFVKNNLVISGLGSTQQVYHYHGDNFCYFRNISSSNYTILYDKVINKCEKGT 596
              Q GQGVM VKNNLV+SG GSTQQVY+Y G + CYFRNISS NYTILYDKV + C+K T
Sbjct:   533 KQEGQGVMVVKNNLVVSGYGSTQQVYNYVGSDQCYFRNISSYNYTILYDKVESVCKKKT 591




GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2169662 AT5G05480 "AT5G05480" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4NEC0 MGG_00799 "Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000031607 AN10715 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0005876 PNG2 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59T41 PNG2 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P81898PNAA_PRUDU3, ., 5, ., 1, ., 5, 20.71240.89540.9597N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1.520.991
3rd Layer3.5.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.XI.3552.1
hypothetical protein (539 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query612
pfam12222427 pfam12222, PNGaseA, Peptide N-acetyl-beta-D-glucos 2e-77
>gnl|CDD|221468 pfam12222, PNGaseA, Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A Back     alignment and domain information
 Score =  251 bits (644), Expect = 2e-77
 Identities = 144/453 (31%), Positives = 214/453 (47%), Gaps = 55/453 (12%)

Query: 60  FEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCK 119
           FEV +P+  P    C   +++H F  +YGKP V   Y PP  C     S + + ++ T  
Sbjct: 3   FEVYQPVVTP-GGVCEILLMNHVFNNSYGKPFVGNVYIPPG-CD---FSTVRINFSVTSN 57

Query: 120 GRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNL 179
           GRQFDR+  ++LG +E+ R+ TAEP   GI+W+  KD+T++ +L   N  QT    LGNL
Sbjct: 58  GRQFDRLAYMYLGDIEVFRTSTAEPTNDGIIWTYIKDMTQFENLWKGN--QTLIFDLGNL 115

Query: 180 VDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPIS-RNLPLNDGLW 238
           +D  YTG +++ +T  FYP +                     D+I PIS R    N    
Sbjct: 116 IDDKYTGSFNMTLTATFYPGNP----------------VRLPDMIIPISARRSAYNYSSA 159

Query: 239 FEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPN-DYIAANNLTDTPGNG 297
           F +  S +   +   +P   YRAVL +       +EFW+SNVP+ D    +N+ +  G  
Sbjct: 160 FVVP-SDNAITQYVSLPNGTYRAVLSISACGQGGEEFWWSNVPSSDTETFDNVGELYGYS 218

Query: 298 PFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLD 357
           PFRE+ + +DG + G VWPF ++FTGGI+P  WRP+  I +FDL   +I+ITPFL  L D
Sbjct: 219 PFREIQLYIDGLLAGVVWPFPIIFTGGIDPGFWRPVVGIDAFDLRQPEIDITPFLPLLTD 278

Query: 358 GKTHKFGFSVTNAL-----------NV---WYIDANLHLWLDGRSAKTEGKLLKHSSVPL 403
           G TH F  +VT  L           +V   W I   + LWL+   + T G+     +   
Sbjct: 279 GNTHSFEVTVTGLLTALQGTGTLTGSVASYWVITGVIFLWLNDDGSTTTGQSPPIIAPKP 338

Query: 404 QVYLES-----NFKGLDGTFLTNV--NRSISSLGWVESSHGKITTHFIQDFAYSNSMVMG 456
            + +          G +GT   +V   R+++      SS       + Q   YSN+  +G
Sbjct: 339 SIAITRFLDPIFVTGFNGTLYYSVGGERTLN----YSSS----ILAWEQGLEYSNTGQLG 390

Query: 457 NSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSF 489
             G  Q  NQ            +        +F
Sbjct: 391 QQGASQTFNQITQGAYLDEQFKEIGLYNDELTF 423


This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 558 and 775 amino acids in length. There is a conserved TGG sequence motif. PNGase A is a protein which cleaves glycopeptides. Length = 427

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 612
PF12222427 PNGaseA: Peptide N-acetyl-beta-D-glucosaminyl aspa 100.0
PF09113141 N-glycanase_C: Peptide-N-glycosidase F, C terminal 95.37
PF09112177 N-glycanase_N: Peptide-N-glycosidase F, N terminal 94.31
>PF12222 PNGaseA: Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A; InterPro: IPR021102 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (PNGase A), unlike many other amidases, is capable of hydrolysing glycopeptides with an alpha-1,3-fucosylated asparagine-bound N-acetylglucosamine (GlcNAc) Back     alignment and domain information
Probab=100.00  E-value=1.4e-122  Score=992.47  Aligned_cols=405  Identities=49%  Similarity=0.849  Sum_probs=365.5

Q ss_pred             eEEEeecCcCCCCCCCceEEEeeeecccccCCCCeeeeccCCCCCCCCCccEEEEEEEEEEecccceeEEEEEECCeEee
Q 037376           58 RYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELL  137 (612)
Q Consensus        58 ~~FEV~~Pv~~P~~~~c~~~Ll~h~F~nSyg~Pp~~~~YtPP~~c~~~~~s~VvL~l~~t~~G~QyDRl~~v~l~gvev~  137 (612)
                      |+|||++|+..|+. +|+++||+|+||||||+|++...|+||. |   +|++|||+|+++|+|||||||++|||||+|||
T Consensus         1 E~fev~~P~~~p~~-~c~~~l~~h~F~~Syg~P~~~~~y~Pp~-c---~~~~VvL~~~~~~~G~QyDRl~~v~l~gvev~   75 (427)
T PF12222_consen    1 EVFEVTPPVVTPKG-VCSVLLLNHSFGNSYGKPPVGTYYTPPD-C---SFSKVVLNLTVTSKGRQYDRLAGVWLGGVEVW   75 (427)
T ss_pred             CceEEcCCCCCCCC-ceEEEEeeeeeccccCCCceeeecCCCC-C---cceEEEEEEEEEecceecceEEEEEECCEEEE
Confidence            78999999988875 9999999999999999999876788777 6   79999999999999999999999999999999


Q ss_pred             eeccCCccCCcceEEEEEehhhhhhhhcccCCeeEEEEECceecceeeeEEEEEEEEEEecCCCCCCCCCCCcccccCCC
Q 037376          138 RSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGY  217 (612)
Q Consensus       138 RtSTaEP~~~gI~Wtv~KDvT~Y~sLf~~~~~~~l~~~L~NiVd~~yTG~f~vtltl~fY~~~~~~~~~~~~~~~~~~~~  217 (612)
                      |||||||+++||+|+++||||+|++||+  ++|+|+|+|+|+||++|||+|+|+|||+||+.+        .       +
T Consensus        76 RtSTaEP~~~gi~wt~~KDvT~Y~~L~~--~~~~~~~~l~N~v~~~ytG~f~v~lt~~fy~~~--------~-------~  138 (427)
T PF12222_consen   76 RTSTAEPTPNGIVWTVSKDVTRYSSLFK--KPQTLIFDLGNIVDDTYTGSFNVTLTLTFYPAD--------D-------P  138 (427)
T ss_pred             eecCCCCCCCcceEEEEEcHHHhHHHhc--CCceEEEEeCcEeccccccEEEEEEEEEEecCC--------C-------C
Confidence            9999999999999999999999999999  689999999999999999999999999999875        2       4


Q ss_pred             CCCCCEEEeCccC-CCCCCCeeEEeecCCCcceeEEecCCCceEEEEEEEeeCCCCceeeecCCChhhhhcCCCC-CCCC
Q 037376          218 GSKADLIWPISRN-LPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLT-DTPG  295 (612)
Q Consensus       218 ~~~aD~IiPis~~-~~~n~g~~f~i~n~~d~~~~~v~iP~Nt~rA~lev~asg~~~eEFWYsNvp~~y~~~~~~~-~~~G  295 (612)
                      .++||+||||+++ .+.|.+.||.|++..  ..+.+.||+|++||+||||||||++|||||+|+||+|...++.. +.+|
T Consensus       139 ~~~ad~i~Pis~~~s~~n~~~~f~ip~~~--~~~~~~~P~Nt~ra~lei~asg~~~eEFWYsNv~d~~~~~f~~~~~~~G  216 (427)
T PF12222_consen  139 AKPADLILPISANKSPYNSPSWFSIPSDD--AVTSLVLPRNTYRAVLEIFASGNGNEEFWYSNVPDSDVDAFNNAGELYG  216 (427)
T ss_pred             CCCCceEECcccCCCCCCCcceEEecCcc--ceeeEeCCCCcEEEEEEEEecCCCcccceecCCChHHhhhhcccccccC
Confidence            6789999999987 556778999996433  45566799999999999999999999999999999998887654 4599


Q ss_pred             CCCeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC-----
Q 037376          296 NGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA-----  370 (612)
Q Consensus       296 ~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~-----  370 (612)
                      |||||||+|+|||++||++|||||||||||+|+|||||++|||||+|+|+||||||||+|+|||+|+|+|+|+|+     
T Consensus       217 ~gpfReV~V~iDg~lag~~~PfPvIfTGGI~P~lWrPI~~i~aFdl~~y~iDlTPfLp~L~dg~~h~~~i~V~~~~~~~~  296 (427)
T PF12222_consen  217 NGPFREVQVYIDGQLAGVVWPFPVIFTGGINPFLWRPIVGIGAFDLPSYDIDLTPFLPLLWDGKPHTFEIRVVNAEDDGD  296 (427)
T ss_pred             CCCcEEEEEEECCEEEEEECCCCeEEeCCcCcccccccCCCcccCCCceeEEeccchhcccCCCccEEEEEEEccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999985     


Q ss_pred             ---------cccEEEeeEEEEEEeCCCceeeceeEEEecCceeeeeecc----cccCce--EEEEEEEEEEEEEEEEEcC
Q 037376          371 ---------LNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESN----FKGLDG--TFLTNVNRSISSLGWVESS  435 (612)
Q Consensus       371 ---------~~~W~vsgnL~lwlD~~~~~ttG~l~~~~~p~~~~~~~~~----~~g~~g--~~~~~a~R~ls~~g~V~ss  435 (612)
                               .++|+|+||||||+|++...++|++....++.......+.    ..|.++  .|.+.++|+++++|     
T Consensus       297 g~~~~~~~v~~~W~VsgnL~lwld~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~y~~~~~r~l~~~~-----  371 (427)
T PF12222_consen  297 GSATLTNSVGSNWYVSGNLFLWLDSSSSSTTGKSPSVVSPEPSISVSSFISIFSTGFNGTLSYSVSASRSLSITS-----  371 (427)
T ss_pred             ccccccCccCceEEEEEEEEEEECCCCcccCCCccceecCCcceeeeeeeeccCCCceeEEEEEEEEEEEEEEee-----
Confidence                     3799999999999999999999988877776654443322    245665  48999999999988     


Q ss_pred             CCceEEEEEEEEEEEEeEEecCCCceeeEEEEEEEeeeEEEEecCCceeEeEEEEEeee
Q 037376          436 HGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPF  494 (612)
Q Consensus       436 ~G~~ttt~~Q~~~f~N~~~~s~~G~~Q~v~q~~~~~~~v~~~~~~~~~~~~~~~~~yPL  494 (612)
                        +.+++|+|+++|+|.|.++++|..|.++|++++...++...+.. ++..+.+++|||
T Consensus       372 --~~~~~~~q~l~~sN~~~~s~~g~~Q~~~q~~~~~~~~~~~~~~~-~~~~~~~~~yPl  427 (427)
T PF12222_consen  372 --SSTVSWSQNLSYSNVQQYSKFGNSQSVNQTTSGTSSSTHFGESA-IYTSSLTFSYPL  427 (427)
T ss_pred             --EEEEEEEeEEEEEEEEEEcccCcEEEEEEEEEeeEEEEEecccc-eeEEEEEEeccC
Confidence              67899999999999999999999999999999987765544433 677799999998



PNGase A is a heterodimer composed of a large and small subunit []. This entry represents the PNGase A precursor, which contains both subunits and is activated by proteolytic cleavage.

>PF09113 N-glycanase_C: Peptide-N-glycosidase F, C terminal; InterPro: IPR015197 This domain adopts an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets Back     alignment and domain information
>PF09112 N-glycanase_N: Peptide-N-glycosidase F, N terminal; InterPro: IPR015196 This domain adopts an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query612
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.1 bits (98), Expect = 5e-04
 Identities = 85/620 (13%), Positives = 161/620 (25%), Gaps = 203/620 (32%)

Query: 35  RNSNLYSSELPTLHLNTTQIPPTRYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKP---- 90
             + +Y  +   L+ N  Q+   +Y  V++     K       +         G      
Sbjct: 107 MMTRMYIEQRDRLY-NDNQVFA-KYN-VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 91  PVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIV 150
             +A       C S KV           + +   +IF  WL     L++C   P      
Sbjct: 164 TWVALDV----CLSYKV-----------QCKMDFKIF--WLN----LKNCN-SPE----- 196

Query: 151 WSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVD-----ITLYF----YPADV 201
            +V + L +    +  N T           D +      +      +        Y   +
Sbjct: 197 -TVLEMLQKLLYQIDPNWTS--------RSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 202 DINDHEYDSDVLAS-GYGSKADLIWPISRNLPLNDGLWFEIENSTDIGVKEFVIPQNVYR 260
            +  +  ++    +     K  L+   +R                   V +F+       
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKI-LL--TTR----------------FKQVTDFLSAATTTH 288

Query: 261 AVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVV 320
             L+     H +                    TP          SL  + +         
Sbjct: 289 ISLD-----HHSMTL-----------------TPDEV------KSLLLKYLD-------- 312

Query: 321 FTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVW-YIDAN 379
                              DLP   +   P   ++          S+ + L  W      
Sbjct: 313 ---------------CRPQDLPREVLTTNPRRLSI-------IAESIRDGLATWDN---- 346

Query: 380 LHLWLDGRSAKTEGKLLKHSSVPLQ-VYLESNFKGLDGTFLTNVNRSISSLG--WVESSH 436
              W      K    +++ S   L+       F  L   F  + +     L   W +   
Sbjct: 347 ---WKHVNCDKLT-TIIESSLNVLEPAEYRKMFDRL-SVFPPSAHIPTILLSLIWFDVI- 400

Query: 437 GKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSS------NAY-FTKSF 489
            K     + +  +  S+V        I   +I+ +  V  E + +      + Y   K+F
Sbjct: 401 -KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459

Query: 490 KVFPF-------YMYSNTEDKGNGTSLSLANVTLGFNEKNSESAG--SGFSESSLKNLQN 540
                       Y YS+                +G + KN E     + F    L + + 
Sbjct: 460 DSDDLIPPYLDQYFYSH----------------IGHHLKNIEHPERMTLFRMVFL-DFR- 501

Query: 541 GQGVMFVKNNLVISGL-----GST----QQVYHYHGDNFCYFRNISSSNYTILYD--KVI 589
                F++  +          GS     QQ+  Y      Y  +       ++      +
Sbjct: 502 -----FLEQKIRHDSTAWNASGSILNTLQQLKFYKP----YICDNDPKYERLVNAILDFL 552

Query: 590 NKCEKGT--EPHLDPSLLKI 607
            K E+      + D  LL+I
Sbjct: 553 PKIEENLICSKYTD--LLRI 570


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query612
3ks7_A397 Putative putative pngase F; putative peptide:N-gly 98.65
3pms_A326 Peptide:N-glycosidase F; jelly roll fold, N-glycan 98.4
>3ks7_A Putative putative pngase F; putative peptide:N-glycosidase F (pngase F), structural GENO joint center for structural genomics; 2.30A {Bacteroides fragilis nctc 9343} Back     alignment and structure
Probab=98.65  E-value=2.9e-06  Score=89.57  Aligned_cols=225  Identities=20%  Similarity=0.285  Sum_probs=152.5

Q ss_pred             cEEEEEEEEEEecccceeEEEEEE-------------C---------------------------CeEeeeeccCCccC-
Q 037376          108 SKIVLEWNATCKGRQFDRIFGVWL-------------G---------------------------GVELLRSCTAEPRA-  146 (612)
Q Consensus       108 s~VvL~l~~t~~G~QyDRl~~v~l-------------~---------------------------gvev~RtSTaEP~~-  146 (612)
                      ..|.|+++..++|.-|||-+.+||             .                           .+||.|==||.--. 
T Consensus        65 ~~v~~~~~~~SnGD~~DktGS~Fvip~~~~~~~l~i~~g~~~~P~~~~~~~~~~~Gii~~~~Y~p~~ElmRf~TpfGvg~  144 (397)
T 3ks7_A           65 VSVSLKVTLASNGDRWDKSGSCFVLPKSSAINLLTIARDGMKFPSVDSLKLEKMVGIVPGKDYLPTVELMRFMTPFGIGH  144 (397)
T ss_dssp             EEEEEEEEEEESSCCSCCEEEEEECCSSCSBCHHHHHTTCCCCCCCCHHHHTTCTTSSCBTTBCCCEEEEEEECCSSTBT
T ss_pred             CeEEEEEEEccCCCcccccCCEEEEECccccchhhhhcCcccCCceecCCcceeeeeeecCCCCCcchhhhccccccccc
Confidence            489999999999999999999997             2                           47888977765421 


Q ss_pred             -Cc------------------ceEEEEEehhhhhhhhcccCCeeEEEEECceecceeeeEEEEEEEEEEecCCCCCCCCC
Q 037376          147 -TG------------------IVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHE  207 (612)
Q Consensus       147 -~g------------------I~Wtv~KDvT~Y~sLf~~~~~~~l~~~L~NiVd~~yTG~f~vtltl~fY~~~~~~~~~~  207 (612)
                       ++                  =.++.+.|||.+.+||+  +...+.+.++|+-.    +-|.|+|.+.|+..+.      
T Consensus       145 ~~~~~~~~~~k~~pvyi~~W~d~v~W~qDITdL~pLL~--Gev~iGi~i~nW~~----~G~~vSL~l~f~~g~~------  212 (397)
T 3ks7_A          145 YSNNNDSLSSKRRPVYIPKWESNVTWQQDITDLYPLLE--GEAYVGIYIDTWTS----EGYLVNADIDVKESRL------  212 (397)
T ss_dssp             TCCSSCGGGTTTSCTTCCCCCSCEEEEEECGGGGGGTB--EEEEEEEEECCCSS----SCEEEEEEEEEEECSC------
T ss_pred             cccccccchhcCCcccccccccCceEEeEchhhHHhhC--CCeEEEEEeccccc----ccEEEEEEEEEecCCc------
Confidence             11                  12567899999999999  45666667776533    3578999999997651      


Q ss_pred             CCcccccCCCCCCCCEEEeCccCCCCCCCeeEE-eecCCCcceeEEecCCCceEEEEEEEeeCCCCceeeecCCChhhhh
Q 037376          208 YDSDVLASGYGSKADLIWPISRNLPLNDGLWFE-IENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIA  286 (612)
Q Consensus       208 ~~~~~~~~~~~~~aD~IiPis~~~~~n~g~~f~-i~n~~d~~~~~v~iP~Nt~rA~lev~asg~~~eEFWYsNvp~~y~~  286 (612)
                             .........|+||-... .--|+.|. +-+. ......+++|.|+..|.|-.-++|||.+    .| =++|. 
T Consensus       213 -------~~~~~~~~~V~PLfNt~-~~~Gq~Y~d~fn~-k~l~v~Ftlp~~~knv~Lr~itTGHGg~----~g-gdEFc-  277 (397)
T 3ks7_A          213 -------ACDVLPKRHVEPLMNTV-YYMGQSYPDIFAR-RDVSTDFTVPKGAKNIRLKYIVTGHGGH----SG-GDEFV-  277 (397)
T ss_dssp             -------TTCBCCCEEEEEEEECC-CCSSCCCCCGGGT-CCEEEEEEECTTCEEEEEEEEEEEECCS----TT-STTTS-
T ss_pred             -------chhccccceEEEeeccc-cccCccccchhcc-cceeEEEEcCCCccEEEEEEEEecCCCC----CC-CCccc-
Confidence                   11233467899998632 11144553 3344 4456899999999999999999999863    12 13322 


Q ss_pred             cCCCCCCCCCCCeeEEEEEECCeEEEEEccc-------ceEE--eCCc----------------------------cCCC
Q 037376          287 ANNLTDTPGNGPFREVVVSLDGEVVGAVWPF-------TVVF--TGGI----------------------------NPLL  329 (612)
Q Consensus       287 ~~~~~~~~G~GpfREV~V~iDG~laGv~~Pf-------PvIf--TGGI----------------------------~P~l  329 (612)
                                  .|+=.|+|||.++=.-.|-       +..-  +|++                            +=.-
T Consensus       278 ------------~k~h~v~vdG~~v~~~~pWr~dC~s~r~~Np~sG~W~~~~~a~~~~~~g~~~ke~e~~lsSSDlSRsN  345 (397)
T 3ks7_A          278 ------------QKRNIISVDGKEVLNFIPWRDDCASFRRFNPATGVWLIKRLASYIGEKGYTEKEVEEPLASSDLSRSN  345 (397)
T ss_dssp             ------------CCCEEEEETTEEEEEECCCBSCGGGGGGGCTTCCEEEEEEEEEEEETTEEEEEEEEEEEEGGGSCBSS
T ss_pred             ------------ceeeEEEECCEEeEEeccccccccccccccCCCCccccccchhhcccccccchhhccccccccccccc
Confidence                        3667889999988665543       2221  2221                            1234


Q ss_pred             ccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC-------cccEEEeeEEE
Q 037376          330 WRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA-------LNVWYIDANLH  381 (612)
Q Consensus       330 WrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~-------~~~W~vsgnL~  381 (612)
                      |=|=.     +.++..|+|.-    |.-| .|+|.|.|..|       .+.|.|||-|+
T Consensus       346 WCPG~-----~v~p~~i~Lg~----l~~G-~Ht~~v~iP~a~~~~g~~~~~W~VS~~lv  394 (397)
T 3ks7_A          346 WCPGS-----DVVPEEAVIGT----LAPG-KHTFTVSIPEAQAVDGNKLNHWLVSAYLV  394 (397)
T ss_dssp             CCTTC-----EECCEEEEEEC----CCSE-EEEEEEECTTCCCCBTTBCCEEEEEEEEE
T ss_pred             CCCCc-----ccCceEEeccc----cCCC-ceEEEEECCCCcccCCcccceEEEEEEEe
Confidence            54422     34567777643    3334 89999999854       47999999775



>3pms_A Peptide:N-glycosidase F; jelly roll fold, N-glycanase, hydrolase; HET: GOL; 1.57A {Elizabethkingia meningoseptica} PDB: 1pgs_A 1pnf_A* 1png_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query612
d1pgsa1137 Peptide:N-glycosidase F, PNGase F {Flavobacterium 97.59
d1pgsa2174 Peptide:N-glycosidase F, PNGase F {Flavobacterium 84.97
d1jz8a3207 beta-Galactosidase {Escherichia coli [TaxId: 562]} 81.67
>d1pgsa1 b.121.1.1 (A:4-140) Peptide:N-glycosidase F, PNGase F {Flavobacterium meningosepticum [TaxId: 238]} Back     information, alignment and structure
class: All beta proteins
fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)
superfamily: PHM/PNGase F
family: Glycosyl-asparaginase
domain: Peptide:N-glycosidase F, PNGase F
species: Flavobacterium meningosepticum [TaxId: 238]
Probab=97.59  E-value=0.00025  Score=63.52  Aligned_cols=110  Identities=18%  Similarity=0.216  Sum_probs=88.5

Q ss_pred             eeecccccCCCCeeeeccCCCCCCCCCccEEEEEEEEEE--ec-ccceeEEEEEE------CCeEeeeeccCCccCCc--
Q 037376           80 HHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATC--KG-RQFDRIFGVWL------GGVELLRSCTAEPRATG--  148 (612)
Q Consensus        80 ~h~F~nSyg~Pp~~~~YtPP~~c~~~~~s~VvL~l~~t~--~G-~QyDRl~~v~l------~gvev~RtSTaEP~~~g--  148 (612)
                      ++.|+.-|++ -+.+.+.=|.+.  .+|++|.|.++.+|  .| -.+||+|.|+|      ...||-|==||-=....  
T Consensus        13 ~~~~ggG~~~-~~~~~~~lP~~~--s~y~~i~m~~~l~Cp~~gC~~WD~~a~i~v~~~~~~~~~e~~r~itpyG~g~~~~   89 (137)
T d1pgsa1          13 KNAFGDGLSQ-SAEGTFTFPADV--TTVKTIKMFIKNECPNKTCDEWDRYANVYVKNKTTGEWYEIGRFITPYWVGTEKL   89 (137)
T ss_dssp             EECCSSSCCS-EEEEEEEECSCC--TTEEEEEEEEEECCGGGCSCCSCCEEEEEEECTTTCCEEEEEEEECCSSSCSTTS
T ss_pred             hccccCCccc-eEEEEEECCccc--cCcceEEEEEEEecCCCCCCccceEEEEEeecCCCccceeeeheecccccccccC
Confidence            3578887776 356778778764  59999999999998  46 78999999999      45788888887654322  


Q ss_pred             -ceEEEEEehhhhhhhhcccCCeeEEEEECceecceeeeEEEEEEEEEEecCC
Q 037376          149 -IVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPAD  200 (612)
Q Consensus       149 -I~Wtv~KDvT~Y~sLf~~~~~~~l~~~L~NiVd~~yTG~f~vtltl~fY~~~  200 (612)
                       .-|.  -|||.|.+||+  +...+.+.++|+..+.    +.++|.+.|+.+.
T Consensus        90 ~~~W~--~DVTd~~~lL~--g~v~i~~~i~~W~~~g----~~v~l~f~Fi~G~  134 (137)
T d1pgsa1          90 PRGLE--IDVTDFKSLLS--GNTELKIYTETWLAKG----REYSVDFDIVYGT  134 (137)
T ss_dssp             SSCEE--EECGGGTTTSS--EEEEEEEEECCCSTTC----EEEEEEEEEEESC
T ss_pred             CCCcE--EechhhHHHhC--CCEEEEEEEccccCCC----EEEEEEEEEecCc
Confidence             2474  89999999999  6789999999998865    5789999999875



>d1pgsa2 b.121.1.1 (A:141-314) Peptide:N-glycosidase F, PNGase F {Flavobacterium meningosepticum [TaxId: 238]} Back     information, alignment and structure
>d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure