Citrus Sinensis ID: 037506

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLGHHLIN
Secondary Structure (PSIPRED)
ccccccccEEEEEccccHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHccEEEEEcccccHHHHHHHHHccccccccEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEcccHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
megkntkpkklifggtgyLGKYMVKAsvssghntfvyarpvtqnsrpsklEIHKEFQGIGVTIIENLCdvgqvtssqrmrsgrslghhlin
Flexible Loop (DISEMBL)
megkntkpkklifggtGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTssqrmrsgrslghhlin
Low Complexity Region (SEG)
MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLGHHLIN
Disordered region (IsUnstruct)
**********LIFGGTGYLGKYMVKASVSSGHNTFVYARPVT******KLEIHKEFQGIGVTIIENLCDVGQV******************
Disordered Region (DISOPRED)
******K****IFGGTGYLGKYMVKASVSSGHNTFVYARPVT**********HKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLGHHL**
Disordered Region (DISEMBL)
MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQ*******************
Disordered Region (DISPRO)
******KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLGHHLIN
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLGHHLIN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	91	2.2.26 [Sep-21-2011]
Q15GI3	323	Isoeugenol synthase 1 OS=	N/A	no	0.626	0.176	0.614	2e-13
Q15GI4	314	Eugenol synthase 1 OS=Oci	N/A	no	0.703	0.203	0.478	1e-09
P52578	308	Isoflavone reductase homo	N/A	no	0.626	0.185	0.465	1e-07
P52577	310	Isoflavone reductase homo	yes	no	0.626	0.183	0.465	2e-07
P52579	310	Isoflavone reductase homo	N/A	no	0.626	0.183	0.465	5e-07
E1U332	308	Isoflavone reductase-like	N/A	no	0.626	0.185	0.517	6e-07
P52580	309	Isoflavone reductase homo	N/A	no	0.758	0.223	0.422	3e-06
Q84V83	382	Leucoanthocyanidin reduct	N/A	no	0.626	0.149	0.423	9e-06
P52581	312	Isoflavone reductase homo	N/A	no	0.637	0.185	0.423	7e-05

>sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/57 (61%), Positives = 43/57 (75%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTI 63
          K K LI G TGYLGKYMVKAS+S GH T+ Y  P+ +NS  SKL++ KEF+ +GVTI
Sbjct: 5  KGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTI 61

Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices.
Petunia hybrida (taxid: 4102)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1EC: 9

>sp|Q15GI4|EGS1_OCIBA Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)

Query: 1  MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
          ME    K K LIFGGTGY+G +MVK S+  GH T+V+ RP   NS  SK  +  EFQ +G
Sbjct: 1  MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP---NS--SKTTLLDEFQSLG 55

Query: 61 VTIIENLCD 69
            I++   D
Sbjct: 56 AIIVKGELD 64

Catalyzes the synthesis of the phenylpropene eugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Eugenol is a characteristic aromatic constituent of spices.

Ocimum basilicum (taxid: 39350)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 8

>sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
          K K L  GGTGY+GK++V+AS  +GH+TFV  R  T  S P+K ++   F+  GVT +
Sbjct: 4  KSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTL-SNPTKTKLIDTFKSFGVTFV 60

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
          K K L+ GGTGY+GK++V+AS  +GH+TF   R  T  S P K +  + F+ +GVTI+
Sbjct: 5  KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATL-SDPVKGKTVQSFKDLGVTIL 61

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
          K K LI GGTGY+GKY+V+ S  SGH TF   R  T  + P K ++   F+  GVT++
Sbjct: 6  KSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKN-PEKSKLIDTFKSYGVTLL 62

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
          K K LI GGTGY+GK++V+AS  S H TF  AR  T  S P K +I + F+  GVTI+
Sbjct: 4  KTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTI-SDPVKGKIIQGFKNSGVTIL 60

Olea europaea (taxid: 4146)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE- 65
          K K L+ GGTGYLG+++V AS   GH T    R  T  S P+K  + K FQ  GVT+++ 
Sbjct: 5  KSKILVVGGTGYLGRHVVAASARLGHPTSALVRD-TAPSDPAKAALLKSFQDAGVTLLKG 63

Query: 66 NLCDVGQVTSS 76
          +L D   + S+
Sbjct: 64 DLYDQASLVSA 74

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q84V83|LAR_DESUN Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)

Query: 6  TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
          TK + L+ GGTG++G+++ KAS+  G+ TF+  RP   +  PSK  I K FQ  G  +I
Sbjct: 11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS--PSKAVIIKTFQDKGAKVI 67

Catalyzes the synthesis of catechin from 3,4-cis-leucocyanidin. Also synthesizes afzelechin and gallocatechin.

Desmodium uncinatum (taxid: 225101)

EC: 1

EC: .

EC: 1

EC: 7

EC: .

EC: 1

EC: .

EC: 3

>sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1

 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
          K K L+ GGTGY+G+ +VKAS+  GH TF+  RP        KL+I   F+  G  ++E
Sbjct: 3  KSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEI-GLDIEKLQILLSFKKQGAILVE 60

Lupinus albus (taxid: 3870)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
2706515	320	isoflavone reductase-like protein [Citru	0.758	0.215	0.898	2e-29
118488749	318	unknown [Populus trichocarpa]	0.725	0.207	0.651	2e-18
224145043	318	phenylcoumaran benzylic ether reductase	0.725	0.207	0.636	3e-18
224136057	318	phenylcoumaran benzylic ether reductase	0.725	0.207	0.651	1e-17
224154451	252	predicted protein [Populus trichocarpa]	0.725	0.261	0.651	2e-17
224166246	108	predicted protein [Populus trichocarpa]	0.725	0.611	0.636	6e-17
76559888	319	TPA: isoflavone reductase-like protein 2	0.648	0.184	0.610	8e-15
359475549	319	PREDICTED: eugenol synthase 1-like [Viti	0.648	0.184	0.610	9e-15
225438289	318	PREDICTED: isoeugenol synthase 1 [Vitis	0.692	0.198	0.571	2e-14
76559890	319	TPA: isoflavone reductase-like protein 3	0.692	0.197	0.571	5e-14

>gi|2706515|emb|CAA73220.1| isoflavone reductase-like protein [Citrus x paradisi]

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/69 (89%), Positives = 63/69 (91%)

Query: 1  MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
          MEG+NTKPK LIFGGTGY GKYMVKASVSSGH TFVYARPVTQNSRPSKLEIHKEFQGIG
Sbjct: 1  MEGENTKPKILIFGGTGYFGKYMVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIG 60

Query: 61 VTIIENLCD 69
          VTIIE   D
Sbjct: 61 VTIIEGELD 69

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488749|gb|ABK96185.1| unknown [Populus trichocarpa]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/66 (65%), Positives = 52/66 (78%)

Query: 4  KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTI 63
          +N   K LIFGGTGY+GKYMVKASVS GH T+VYARP+T  S P+K+ IHKEFQ +GVTI
Sbjct: 2  ENEMSKILIFGGTGYIGKYMVKASVSMGHKTYVYARPITTQSSPAKIGIHKEFQAMGVTI 61

Query: 64 IENLCD 69
          ++   D
Sbjct: 62 VQGEFD 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145043|ref|XP_002336195.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222832409|gb|EEE70886.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 4  KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTI 63
          +N   K LIFGGTGY+GKYMVKASVS GH T++YARP+T  S P+K+ IHKEFQ +GVTI
Sbjct: 2  ENGTSKILIFGGTGYIGKYMVKASVSMGHKTYLYARPITTQSSPAKISIHKEFQAMGVTI 61

Query: 64 IENLCD 69
          ++   D
Sbjct: 62 VQGEFD 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136057|ref|XP_002327370.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222835740|gb|EEE74175.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/66 (65%), Positives = 51/66 (77%)

Query: 4  KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTI 63
          +N   K LIFGGTGYLGKYMVKASVS GH T+VYARP+T  S P+K+ I KEFQ +GVTI
Sbjct: 2  ENGTSKILIFGGTGYLGKYMVKASVSMGHKTYVYARPITTQSSPAKIGIRKEFQAMGVTI 61

Query: 64 IENLCD 69
          ++   D
Sbjct: 62 VQGEFD 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224154451|ref|XP_002337478.1| predicted protein [Populus trichocarpa] gi|222839435|gb|EEE77772.1| predicted protein [Populus trichocarpa]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 52/66 (78%)

Query: 4  KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTI 63
          +N   K LIFGGTGY+GKYMVKASVS GH T+VYARP+T  S P+K+ IHKEFQ +GVTI
Sbjct: 2  ENEMSKILIFGGTGYIGKYMVKASVSMGHKTYVYARPITTQSSPAKIGIHKEFQAMGVTI 61

Query: 64 IENLCD 69
          ++   D
Sbjct: 62 VQGEFD 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224166246|ref|XP_002338906.1| predicted protein [Populus trichocarpa] gi|222873873|gb|EEF11004.1| predicted protein [Populus trichocarpa]

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 51/66 (77%)

Query: 4  KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTI 63
          +N   K LIFGGTGY+GKYMVKASVS GH T+VYAR +T  S P+K+ IHKEFQ +GVTI
Sbjct: 2  ENEMSKILIFGGTGYIGKYMVKASVSMGHKTYVYARSITTQSSPAKIGIHKEFQAMGVTI 61

Query: 64 IENLCD 69
          ++   D
Sbjct: 62 VQGEFD 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76559888|tpe|CAI56331.1| TPA: isoflavone reductase-like protein 2 [Vitis vinifera]

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/59 (61%), Positives = 47/59 (79%)

Query: 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCD 69
          LIFGGTGY+G+YMVKASV  GH T+VY+RP+T  + PSK+E+ KEFQ +GV I++   D
Sbjct: 9  LIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMGVNIVQGELD 67

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475549|ref|XP_003631700.1| PREDICTED: eugenol synthase 1-like [Vitis vinifera]

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/59 (61%), Positives = 47/59 (79%)

Query: 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCD 69
          LIFGGTGY+G+YMVKASV  GH T+VY+RP+T  + PSK+E+ KEFQ +GV I++   D
Sbjct: 9  LIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMGVNIVQGELD 67

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438289|ref|XP_002269639.1| PREDICTED: isoeugenol synthase 1 [Vitis vinifera] gi|147842981|emb|CAN80538.1| hypothetical protein VITISV_043370 [Vitis vinifera] gi|296082647|emb|CBI21652.3| unnamed protein product [Vitis vinifera]

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 46/63 (73%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEN 66
          K K L+FG TGYLGKYMVKASVS GH T+ Y RP   +++PSKL+ H+E + +GVTI + 
Sbjct: 5  KSKILVFGATGYLGKYMVKASVSMGHPTYAYVRPANPDAKPSKLQQHRELESLGVTIFQG 64

Query: 67 LCD 69
            D
Sbjct: 65 ELD 67

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76559890|tpe|CAI56332.1| TPA: isoflavone reductase-like protein 3 [Vitis vinifera]

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 45/63 (71%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEN 66
          K K L+FG TGYLGKYMVKASVS GH T+ Y RP   +++PSKL  H+E + +GVTI + 
Sbjct: 5  KSKILVFGATGYLGKYMVKASVSMGHPTYAYVRPANPDAKPSKLPQHRELESLGVTIFQG 64

Query: 67 LCD 69
            D
Sbjct: 65 ELD 67

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.626	0.183	0.465	2.3e-08
TAIR|locus:2136383	308	AT4G39230 [Arabidopsis thalian	0.923	0.272	0.375	6.3e-08
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.626	0.179	0.396	2.3e-06
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.692	0.198	0.369	3.8e-06
TAIR|locus:2025167	322	AT1G75300 [Arabidopsis thalian	0.626	0.177	0.396	5.1e-06
TAIR|locus:2016482	310	AT1G19540 [Arabidopsis thalian	0.604	0.177	0.410	1e-05
TAIR|locus:2139494	306	AT4G34540 [Arabidopsis thalian	0.769	0.228	0.363	4.5e-05
TAIR|locus:2119455	317	PRR2 "pinoresinol reductase 2"	0.637	0.182	0.338	0.00046

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K K L+ GGTGY+GK++V+AS  +GH+TF   R  T  S P K +  + F+ +GVTI+
Sbjct:     5 KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATL-SDPVKGKTVQSFKDLGVTIL 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 33/88 (37%), Positives = 50/88 (56%)

Query:     6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVT-II 64
             +K K L  GGTGY+GKY+V+AS  SGH T V  R  T  S PS+    + F+ +GV  ++
Sbjct:     3 SKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTS-PSRSSTIENFKNLGVQFLL 61

Query:    65 ENLCDVGQVTSSQRMRSG--RSLGHHLI 90
              +L D   + +S +       ++GH L+
Sbjct:    62 GDLDDHTSLVNSIKQADVVISTVGHSLL 89

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0032442 "phenylcoumaran benzylic ether reductase activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/58 (39%), Positives = 38/58 (65%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K K L+ GGTG++GK +++ASV +GH+T    R  +  S P+K +  + F+  GVT++
Sbjct:     5 KSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASL-SDPNKGKTVQNFKDFGVTLL 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 24/65 (36%), Positives = 38/65 (58%)

Query:     2 EGKNT-KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
             E K T K + L+ G TGY+GK +V+A ++ GH T+V  RP        K+++   F+ +G
Sbjct:     3 ESKRTEKTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEI-GLEIEKVQLFLSFKKLG 61

Query:    61 VTIIE 65
               I+E
Sbjct:    62 ARIVE 66

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K K L+ GGTGY+G+++V+ S  +G+ TF   R  +  S P K +  + F+ +GVTI+
Sbjct:     5 KSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASL-SDPVKSKTIQSFKDLGVTIL 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query:     9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K L+ G TG +GK +V+ S  SGH TF   R  +  S P K ++ + F+ +GVTI+
Sbjct:     4 KILVIGATGLIGKVLVEESAKSGHATFALVREASL-SDPVKAQLVERFKDLGVTIL 58

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 28/77 (36%), Positives = 40/77 (51%)

Query:     1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
             ME +  K + LI G TG LG Y+ + S+ SGH TF   R  T +    KL   K     G
Sbjct:     1 MEEEKKKSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSD---KL---KSLSDAG 54

Query:    61 VTIIE-NLCDVGQVTSS 76
             VT+++ +L D G +  +
Sbjct:    55 VTLLKGSLEDEGSLAEA 71

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS

TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 0.00046, P = 0.00046
 Identities = 20/59 (33%), Positives = 34/59 (57%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
             K + L+ GGTG LG+ +V A ++ GH T+V  RP        K+++   F+ +G  ++E
Sbjct:     9 KTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEI-GVDIEKVQLLLSFKRLGAHLVE 66


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       91        91   0.00091  102 3  11 22  0.37    30
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  496 (53 KB)
  Total size of DFA:  95 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.05u 0.18s 9.23t   Elapsed:  00:00:01
  Total cpu time:  9.06u 0.18s 9.24t   Elapsed:  00:00:01
  Start:  Mon May 20 22:45:59 2013   End:  Mon May 20 22:46:00 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	91
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-13
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	6e-09
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	9e-09
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-04

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 63.1 bits (154), Expect = 1e-13
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 7/56 (12%)

Query: 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEN 66
          L+FG TGY G  +V+AS+ +GH             R  K E+ K  +  GV ++E 
Sbjct: 2  LVFGATGYQGGSVVRASLKAGHPVRALV-------RDPKSELAKSLKAAGVELVEG 50

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 50.9 bits (122), Expect = 6e-09
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 3   GKNTKPKK-LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ-NSRPSKLEIHKEFQGIG 60
            K  K    L+ G TGY+GK++V+  V  G+N    AR  +    +  K +  KE  G  
Sbjct: 55  SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAE 114

Query: 61  VTIIENLCDVGQVTS 75
           V       DV    S
Sbjct: 115 VVF----GDVTDADS 125

Length = 390

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 9/56 (16%)

Query: 11 LIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
           I G TG LG  +V A ++S G    V  RP + +S         EFQ  GV ++ 
Sbjct: 3  AIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSS--------NEFQPSGVKVVP 50

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 16/46 (34%), Positives = 27/46 (58%)

Query: 9  KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHK 54
          K LI GGT ++GK +V+  +++GH+  V+ R  T+   P  +E   
Sbjct: 2  KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGVEHIV 47

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.56
CHL00194	317	ycf39 Ycf39; Provisional	99.48
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.38
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.37
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.36
PLN02427	386	UDP-apiose/xylose synthase	99.35
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.35
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.34
PLN00198	338	anthocyanidin reductase; Provisional	99.34
PLN02572	442	UDP-sulfoquinovose synthase	99.33
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.32
PLN02583	297	cinnamoyl-CoA reductase	99.32
PLN02650	351	dihydroflavonol-4-reductase	99.32
PRK12828	239	short chain dehydrogenase; Provisional	99.29
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.28
PLN02653	340	GDP-mannose 4,6-dehydratase	99.27
PRK06180	277	short chain dehydrogenase; Provisional	99.27
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.26
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.26
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.26
PLN02214	342	cinnamoyl-CoA reductase	99.25
PLN02686	367	cinnamoyl-CoA reductase	99.25
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.24
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.24
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.24
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.23
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.23
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.23
PRK09135	249	pteridine reductase; Provisional	99.23
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.22
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.22
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.22
PRK07806	248	short chain dehydrogenase; Provisional	99.22
PRK07102	243	short chain dehydrogenase; Provisional	99.22
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.22
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.22
PRK06182	273	short chain dehydrogenase; Validated	99.21
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.21
PRK06924	251	short chain dehydrogenase; Provisional	99.21
PRK07890	258	short chain dehydrogenase; Provisional	99.21
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.21
PRK06194	287	hypothetical protein; Provisional	99.21
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.21
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.21
PLN02240	352	UDP-glucose 4-epimerase	99.2
PRK06179	270	short chain dehydrogenase; Provisional	99.2
PRK12829	264	short chain dehydrogenase; Provisional	99.2
PRK08628	258	short chain dehydrogenase; Provisional	99.2
PRK06482	276	short chain dehydrogenase; Provisional	99.2
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.2
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.2
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.19
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.19
PLN02206	442	UDP-glucuronate decarboxylase	99.19
PRK08265	261	short chain dehydrogenase; Provisional	99.19
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.18
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.18
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.18
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.18
PRK07326	237	short chain dehydrogenase; Provisional	99.18
PRK06523	260	short chain dehydrogenase; Provisional	99.18
PRK10538	248	malonic semialdehyde reductase; Provisional	99.18
PRK07063	260	short chain dehydrogenase; Provisional	99.17
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.17
PRK05717	255	oxidoreductase; Validated	99.17
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.17
PRK06500	249	short chain dehydrogenase; Provisional	99.16
PRK05875	276	short chain dehydrogenase; Provisional	99.16
PRK08263	275	short chain dehydrogenase; Provisional	99.15
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.15
PRK08267	260	short chain dehydrogenase; Provisional	99.15
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.14
PRK06914	280	short chain dehydrogenase; Provisional	99.14
PRK07062	265	short chain dehydrogenase; Provisional	99.14
PRK12939	250	short chain dehydrogenase; Provisional	99.14
PRK07814	263	short chain dehydrogenase; Provisional	99.14
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.13
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.13
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.13
PLN02253	280	xanthoxin dehydrogenase	99.13
PRK07067	257	sorbitol dehydrogenase; Provisional	99.13
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.13
PRK06172	253	short chain dehydrogenase; Provisional	99.13
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.12
PRK05876	275	short chain dehydrogenase; Provisional	99.12
PRK07024	257	short chain dehydrogenase; Provisional	99.12
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.12
PRK08219	227	short chain dehydrogenase; Provisional	99.12
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.12
PRK06197	306	short chain dehydrogenase; Provisional	99.12
PRK05993	277	short chain dehydrogenase; Provisional	99.11
PRK09186	256	flagellin modification protein A; Provisional	99.11
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.11
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.11
PRK07774	250	short chain dehydrogenase; Provisional	99.11
PRK07074	257	short chain dehydrogenase; Provisional	99.11
PRK06398	258	aldose dehydrogenase; Validated	99.1
PRK07576	264	short chain dehydrogenase; Provisional	99.1
PRK08226	263	short chain dehydrogenase; Provisional	99.1
PRK06101	240	short chain dehydrogenase; Provisional	99.09
PRK07454	241	short chain dehydrogenase; Provisional	99.09
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.09
PRK07985	294	oxidoreductase; Provisional	99.09
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.09
PRK06057	255	short chain dehydrogenase; Provisional	99.09
PRK06138	252	short chain dehydrogenase; Provisional	99.09
PRK05693	274	short chain dehydrogenase; Provisional	99.09
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.09
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.08
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.08
PLN02260	668	probable rhamnose biosynthetic enzyme	99.08
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.08
PRK06196	315	oxidoreductase; Provisional	99.07
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.07
PRK06128	300	oxidoreductase; Provisional	99.07
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.07
PRK06841	255	short chain dehydrogenase; Provisional	99.07
COG2910	211	Putative NADH-flavin reductase [General function p	99.07
PRK12827	249	short chain dehydrogenase; Provisional	99.06
PRK08264	238	short chain dehydrogenase; Validated	99.06
PRK07775	274	short chain dehydrogenase; Provisional	99.06
PRK07825	273	short chain dehydrogenase; Provisional	99.06
PRK09291	257	short chain dehydrogenase; Provisional	99.06
PRK07478	254	short chain dehydrogenase; Provisional	99.06
PRK06701	290	short chain dehydrogenase; Provisional	99.06
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.06
PRK08251	248	short chain dehydrogenase; Provisional	99.06
PRK07023	243	short chain dehydrogenase; Provisional	99.05
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.05
PRK12744	257	short chain dehydrogenase; Provisional	99.05
PRK12320	699	hypothetical protein; Provisional	99.05
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.05
PRK08643	256	acetoin reductase; Validated	99.05
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.04
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.04
PRK12746	254	short chain dehydrogenase; Provisional	99.04
PRK06949	258	short chain dehydrogenase; Provisional	99.04
PRK05867	253	short chain dehydrogenase; Provisional	99.04
PRK07856	252	short chain dehydrogenase; Provisional	99.04
PRK09134	258	short chain dehydrogenase; Provisional	99.04
PRK08589	272	short chain dehydrogenase; Validated	99.04
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.04
PRK09072	263	short chain dehydrogenase; Provisional	99.03
PRK06139	330	short chain dehydrogenase; Provisional	99.03
PRK08017	256	oxidoreductase; Provisional	99.03
PRK06483	236	dihydromonapterin reductase; Provisional	99.03
PRK07109	334	short chain dehydrogenase; Provisional	99.03
PRK07677	252	short chain dehydrogenase; Provisional	99.03
PRK05866	293	short chain dehydrogenase; Provisional	99.03
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.03
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.02
PRK06114	254	short chain dehydrogenase; Provisional	99.02
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.02
PRK08177	225	short chain dehydrogenase; Provisional	99.02
PRK07035	252	short chain dehydrogenase; Provisional	99.01
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.01
PRK05854	313	short chain dehydrogenase; Provisional	99.01
PRK08339	263	short chain dehydrogenase; Provisional	99.01
PLN03209	576	translocon at the inner envelope of chloroplast su	99.01
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.01
PRK08278	273	short chain dehydrogenase; Provisional	99.01
PRK06953	222	short chain dehydrogenase; Provisional	99.01
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.01
PRK07904	253	short chain dehydrogenase; Provisional	99.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.0
PLN00016	378	RNA-binding protein; Provisional	99.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.99
PRK06181	263	short chain dehydrogenase; Provisional	98.99
PRK12743	256	oxidoreductase; Provisional	98.99
PRK12937	245	short chain dehydrogenase; Provisional	98.99
PRK07060	245	short chain dehydrogenase; Provisional	98.98
PRK07201	657	short chain dehydrogenase; Provisional	98.98
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.98
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.98
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.97
PRK06198	260	short chain dehydrogenase; Provisional	98.97
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.97
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.97
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.96
PRK08303	305	short chain dehydrogenase; Provisional	98.96
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.96
PRK05865	854	hypothetical protein; Provisional	98.96
PRK08277	278	D-mannonate oxidoreductase; Provisional	98.95
PRK09242	257	tropinone reductase; Provisional	98.95
PRK07832	272	short chain dehydrogenase; Provisional	98.95
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.95
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.94
PRK07201	657	short chain dehydrogenase; Provisional	98.94
PRK07577	234	short chain dehydrogenase; Provisional	98.94
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.94
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.94
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.93
PRK05650	270	short chain dehydrogenase; Provisional	98.92
PRK05884	223	short chain dehydrogenase; Provisional	98.92
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.91
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.89
PRK12742	237	oxidoreductase; Provisional	98.89
PRK08309	177	short chain dehydrogenase; Provisional	98.89
PRK06123	248	short chain dehydrogenase; Provisional	98.89
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	98.89
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.89
PRK05855	582	short chain dehydrogenase; Validated	98.89
PRK06125	259	short chain dehydrogenase; Provisional	98.88
PRK05872	296	short chain dehydrogenase; Provisional	98.87
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.87
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.87
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.87
PRK07791	286	short chain dehydrogenase; Provisional	98.86
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.85
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.85
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.85
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.85
PRK12367	245	short chain dehydrogenase; Provisional	98.84
PRK07831	262	short chain dehydrogenase; Provisional	98.84
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.84
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.84
PRK08703	239	short chain dehydrogenase; Provisional	98.82
PRK06484	520	short chain dehydrogenase; Validated	98.82
PRK08862	227	short chain dehydrogenase; Provisional	98.82
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.82
PRK07069	251	short chain dehydrogenase; Validated	98.82
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.82
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.8
PRK07041	230	short chain dehydrogenase; Provisional	98.79
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.78
PRK05599	246	hypothetical protein; Provisional	98.78
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.77
PLN02778	298	3,5-epimerase/4-reductase	98.77
PRK12747	252	short chain dehydrogenase; Provisional	98.76
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.76
PRK06484	520	short chain dehydrogenase; Validated	98.75
PRK08324	681	short chain dehydrogenase; Validated	98.75
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.75
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.75
PLN02503	605	fatty acyl-CoA reductase 2	98.74
PRK06720	169	hypothetical protein; Provisional	98.73
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.72
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.71
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.71
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.71
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.7
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.7
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.7
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.7
PLN02996	491	fatty acyl-CoA reductase	98.69
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.69
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.68
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.68
PLN02780	320	ketoreductase/ oxidoreductase	98.66
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.65
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.64
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.62
COG1028	251	FabG Dehydrogenases with different specificities (	98.61
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.61
PRK06940	275	short chain dehydrogenase; Provisional	98.61
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.6
KOG1208	314	consensus Dehydrogenases with different specificit	98.6
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.58
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.57
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.55
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.53
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.51
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.5
PRK07578	199	short chain dehydrogenase; Provisional	98.5
PLN00015	308	protochlorophyllide reductase	98.49
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.42
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.41
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.38
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.36
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.31
PLN02260	668	probable rhamnose biosynthetic enzyme	98.31
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.26
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.25
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.25
PRK09620	229	hypothetical protein; Provisional	98.2
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.19
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.19
KOG0725	270	consensus Reductases with broad range of substrate	98.17
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.14
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	98.13
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.13
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.1
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.1
PRK09496	453	trkA potassium transporter peripheral membrane com	98.07
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.05
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.0
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	97.96
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.9
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.89
PRK10669	558	putative cation:proton antiport protein; Provision	97.89
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.88
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.86
PRK09496	453	trkA potassium transporter peripheral membrane com	97.82
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	97.8
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.8
PRK14982	340	acyl-ACP reductase; Provisional	97.79
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.78
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.77
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.77
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.77
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.69
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.68
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	97.67
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.62
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.56
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.53
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.48
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.46
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.44
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.4
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.4
PRK04148	134	hypothetical protein; Provisional	97.38
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.34
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	97.32
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.3
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.3
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.29
PRK10537	393	voltage-gated potassium channel; Provisional	97.29
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.29
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.27
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	97.23
PRK08655	437	prephenate dehydrogenase; Provisional	97.22
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.22
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.21
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.19
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	97.18
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.17
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.15
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.14
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	97.13
PRK06849	389	hypothetical protein; Provisional	97.13
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.13
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.11
PLN02383	344	aspartate semialdehyde dehydrogenase	97.1
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.07
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.05
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.05
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	97.04
PRK06444	197	prephenate dehydrogenase; Provisional	97.02
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.02
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.01
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.0
PRK00711	416	D-amino acid dehydrogenase small subunit; Validate	96.95
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.95
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.95
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.94
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.93
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.92
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.91
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.91
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.89
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	96.89
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.88
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.85
PRK07236	386	hypothetical protein; Provisional	96.84
PLN00106	323	malate dehydrogenase	96.84
PRK05086	312	malate dehydrogenase; Provisional	96.83
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	96.82
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.82
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.81
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.74
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.73
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	96.72
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.72
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.7
PRK11259	376	solA N-methyltryptophan oxidase; Provisional	96.69
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.68
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.66
PRK07417	279	arogenate dehydrogenase; Reviewed	96.64
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.62
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.62
PLN02256	304	arogenate dehydrogenase	96.57
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.56
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.56
PRK08818	370	prephenate dehydrogenase; Provisional	96.55
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.55
PTZ00325	321	malate dehydrogenase; Provisional	96.54
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.54
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.51
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	96.51
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.51
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.51
COG0665	387	DadA Glycine/D-amino acid oxidases (deaminating) [	96.5
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.5
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.46
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.45
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.41
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	96.4
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.4
PF01266	358	DAO: FAD dependent oxidoreductase; InterPro: IPR00	96.39
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.39
PLN02948	577	phosphoribosylaminoimidazole carboxylase	96.38
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.37
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.35
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.3
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.29
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.27
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.27
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.26
PRK05868	372	hypothetical protein; Validated	96.25
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.24
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.23
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.23
PF01494	356	FAD_binding_3: FAD binding domain; InterPro: IPR00	96.22
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
PRK08163	396	salicylate hydroxylase; Provisional	96.19
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.14
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.14
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.14
PRK06753	373	hypothetical protein; Provisional	96.13
PRK06223	307	malate dehydrogenase; Reviewed	96.13
TIGR03364	365	HpnW_proposed FAD dependent oxidoreductase TIGR033	96.13
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.12
TIGR01316	449	gltA glutamate synthase (NADPH), homotetrameric. T	96.1
PTZ00318	424	NADH dehydrogenase-like protein; Provisional	96.09
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.09
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.08
PLN02712	667	arogenate dehydrogenase	96.07
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.04
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.03
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.03
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.01
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.01
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	95.99
TIGR01377	380	soxA_mon sarcosine oxidase, monomeric form. Sarcos	95.98
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.98
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.98
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.97
PRK05732	395	2-octaprenyl-6-methoxyphenyl hydroxylase; Validate	95.9
PRK06847	375	hypothetical protein; Provisional	95.89
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.89
PRK15059	292	tartronate semialdehyde reductase; Provisional	95.84
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	95.82
PRK07494	388	2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio	95.82
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	95.82
PLN02712	667	arogenate dehydrogenase	95.81
PRK01747	662	mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans	95.79
PRK09126	392	hypothetical protein; Provisional	95.79
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.79
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.78
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	95.77
PRK08013	400	oxidoreductase; Provisional	95.75
PRK08773	392	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	95.75
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.74
PF00743	531	FMO-like: Flavin-binding monooxygenase-like; Inter	95.73
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	95.72
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.71
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.7
PRK13512	438	coenzyme A disulfide reductase; Provisional	95.7
PRK05335	436	tRNA (uracil-5-)-methyltransferase Gid; Reviewed	95.7
PLN02172	461	flavin-containing monooxygenase FMO GS-OX	95.69
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.68
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.68
PRK12770	352	putative glutamate synthase subunit beta; Provisio	95.67
PRK08849	384	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	95.67
PRK12831	464	putative oxidoreductase; Provisional	95.66
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.66
PRK12480	330	D-lactate dehydrogenase; Provisional	95.64
PRK07364	415	2-octaprenyl-6-methoxyphenyl hydroxylase; Validate	95.64
TIGR01316	449	gltA glutamate synthase (NADPH), homotetrameric. T	95.64
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.64
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.63
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	95.63
PRK07208	479	hypothetical protein; Provisional	95.61
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	95.61
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.58
PRK11728	393	hydroxyglutarate oxidase; Provisional	95.58
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.57
PRK07538	413	hypothetical protein; Provisional	95.56
PRK06126	545	hypothetical protein; Provisional	95.56
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	95.56
PRK06184	502	hypothetical protein; Provisional	95.54
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.51
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.5
PRK06545	359	prephenate dehydrogenase; Validated	95.5
PRK08850	405	2-octaprenyl-6-methoxyphenol hydroxylase; Validate	95.49
PRK11749	457	dihydropyrimidine dehydrogenase subunit A; Provisi	95.48
PRK07588	391	hypothetical protein; Provisional	95.48
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.47
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.47
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.47
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.46
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.44
COG0654	387	UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and	95.43
PRK05442	326	malate dehydrogenase; Provisional	95.43
PLN02688	266	pyrroline-5-carboxylate reductase	95.42
PRK06567	1028	putative bifunctional glutamate synthase subunit b	95.42
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	95.41
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.41
COG3268	382	Uncharacterized conserved protein [Function unknow	95.41
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	95.4
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	95.4
PLN02353	473	probable UDP-glucose 6-dehydrogenase	95.39
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.37
COG1252	405	Ndh NADH dehydrogenase, FAD-containing subunit [En	95.36
KOG0029	501	consensus Amine oxidase [Secondary metabolites bio	95.36

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.56  E-value=1.7e-14  Score=102.22  Aligned_cols=70  Identities=17%  Similarity=0.197  Sum_probs=58.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+++|+|||||||||+|++++|+++||.|++.+|++..   +.+..++..++.  .+.+++++|+.|++++..++
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~---~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED---EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch---hhhHHHHHhcccCcccceEEeccccccchHHHHH
Confidence            45799999999999999999999999999999998753   234445566653  34899999999999999986

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.48  E-value=9.2e-14  Score=97.25  Aligned_cols=62  Identities=16%  Similarity=0.270  Sum_probs=51.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||+|++++++|+++||+|++++|+.+.      .   ..+...+++++++|++|++.+.+++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~------~---~~l~~~~v~~v~~Dl~d~~~l~~al   62 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK------A---SFLKEWGAELVYGDLSLPETLPPSF   62 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH------h---hhHhhcCCEEEECCCCCHHHHHHHH
Confidence            589999999999999999999999999999997421      1   1122347899999999999998875

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=1.7e-12  Score=91.15  Aligned_cols=65  Identities=18%  Similarity=0.242  Sum_probs=53.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+||||||+||||||.+.+|++.||+|+++++.+++.  ++      .+.....+++++|+.|.+.+++.+.+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~--~~------~v~~~~~~f~~gDi~D~~~L~~vf~~   65 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH--KI------ALLKLQFKFYEGDLLDRALLTAVFEE   65 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC--HH------HhhhccCceEEeccccHHHHHHHHHh
Confidence            5899999999999999999999999999999987653  21      12211168999999999999987644

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.37  E-value=3.4e-12  Score=90.42  Aligned_cols=72  Identities=13%  Similarity=0.005  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hh---hcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KE---FQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~---l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+|+|+|||||||||++|+++|+++|++|++++|.....  ....... ..   .....++++.+|+.|.+.+...+
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~   88 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGY--QHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC   88 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc--hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            4568999999999999999999999999999999865322  1111100 00   11125789999999988877654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.36  E-value=4.1e-12  Score=89.53  Aligned_cols=71  Identities=14%  Similarity=0.039  Sum_probs=51.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhh-hh---cCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHK-EF---QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~l---~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++|+|||||||||++++++|++.|++|++++|..... .......+. ..   ...+++++++|++|.+.+.+.+.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSF-NTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCccc-chhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence            5899999999999999999999999999999975321 001111110 00   02358999999999998888753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02427 UDP-apiose/xylose synthase

Probab=99.35  E-value=3.2e-12  Score=91.46  Aligned_cols=71  Identities=10%  Similarity=0.083  Sum_probs=52.8

Q ss_pred             CCCC-CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhh
Q 037506            2 EGKN-TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         2 ~~~~-~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~   75 (91)
                      +||. ..|+|+|||||||||++|+++|+++ +++|++++|+...      ...+...    ...+++++.+|++|.+.+.
T Consensus         8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~------~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~   81 (386)
T PLN02427          8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK------IKHLLEPDTVPWSGRIQFHRINIKHDSRLE   81 (386)
T ss_pred             CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh------hhhhhccccccCCCCeEEEEcCCCChHHHH
Confidence            4553 3568999999999999999999998 5999999986422      1111111    1136899999999998888


Q ss_pred             HHH
Q 037506           76 SQR   78 (91)
Q Consensus        76 ~~~   78 (91)
                      +++
T Consensus        82 ~~~   84 (386)
T PLN02427         82 GLI   84 (386)
T ss_pred             HHh
Confidence            764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.35  E-value=4.9e-12  Score=87.85  Aligned_cols=69  Identities=14%  Similarity=0.112  Sum_probs=51.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .++|+|||||||||++++++|+++||+|++++|+....   .....+....  ..+++++++|++|++.+.+++
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP---KKTEHLLALDGAKERLHLFKANLLEEGSFDSVV   74 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch---hhHHHHHhccCCCCceEEEeccccCcchHHHHH
Confidence            47899999999999999999999999999999875321   1111111111  236789999999988887764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.34  E-value=9.3e-12  Score=80.40  Aligned_cols=59  Identities=27%  Similarity=0.375  Sum_probs=51.2

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+|+||||++|++++++|+++|++|++++|++.      +.+.     ..+++++.+|+.|++.+.+++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~------~~~~-----~~~~~~~~~d~~d~~~~~~al~   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPS------KAED-----SPGVEIIQGDLFDPDSVKAALK   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGG------GHHH-----CTTEEEEESCTTCHHHHHHHHT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCch------hccc-----ccccccceeeehhhhhhhhhhh
Confidence            799999999999999999999999999999752      2221     4589999999999999999864

...

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.34  E-value=7.5e-12  Score=87.95  Aligned_cols=71  Identities=17%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+++|+||||+||||++++++|+++|++|++++|+....   ........+.. ..++++.+|++|++.+.+.+
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQ---KKIAHLRALQELGDLKIFGADLTDEESFEAPI   78 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCH---HHHHHHHhcCCCCceEEEEcCCCChHHHHHHH
Confidence            4568899999999999999999999999999999875321   11111111211 25789999999998888765

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.33  E-value=8.8e-12  Score=91.40  Aligned_cols=76  Identities=16%  Similarity=0.126  Sum_probs=53.3

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-c-------------chHHHhhhhcCCCeEEEEeeCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-P-------------SKLEIHKEFQGIGVTIIENLCD   69 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~-------------~~~~~~~~l~~~~v~~v~gDl~   69 (91)
                      +..+|+|+|||||||||++|+++|+++|++|++++|....... .             +....+......+++++++|++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            4556899999999999999999999999999998864321100 0             0000001111236899999999


Q ss_pred             ChhhhhHHHh
Q 037506           70 VGQVTSSQRM   79 (91)
Q Consensus        70 d~~~l~~~~~   79 (91)
                      |.+.+.+++.
T Consensus       124 d~~~v~~~l~  133 (442)
T PLN02572        124 DFEFLSEAFK  133 (442)
T ss_pred             CHHHHHHHHH
Confidence            9999888753

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.32  E-value=1.2e-11  Score=86.25  Aligned_cols=70  Identities=14%  Similarity=0.120  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..++|+|||||||||++++++|+++||+|++++|+....   ..........  ...++++++|++|++.+.+++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR---KKTEHLLALDGAKERLKLFKADLLEESSFEQAI   75 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch---HHHHHHHhccCCCCceEEEecCCCCcchHHHHH
Confidence            357899999999999999999999999999999975421   1111111111  236899999999999888765

>PLN02583 cinnamoyl-CoA reductase

Probab=99.32  E-value=1e-11  Score=86.29  Aligned_cols=70  Identities=10%  Similarity=0.082  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.++|+|||||||||++++++|+++||+|++++|+....   .....+..+.  ..+++++++|++|.+.+.+++
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l   76 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET---EIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL   76 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh---hHHHHHHhcccCCCceEEEEecCCCHHHHHHHH
Confidence            356899999999999999999999999999999864211   1111112221  235889999999999888775

>PLN02650 dihydroflavonol-4-reductase

Probab=99.32  E-value=1e-11  Score=87.74  Aligned_cols=71  Identities=14%  Similarity=0.188  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .++++|||||||||||++++++|+++|++|++++|+....   ..........  ...++++.+|++|.+.+.+.+
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~   75 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANV---KKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI   75 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchh---HHHHHHHhccCCCCceEEEEecCCChhhHHHHH
Confidence            3567999999999999999999999999999999875321   1111111111  124789999999998888764

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.29  E-value=3.6e-11  Score=79.77  Aligned_cols=74  Identities=16%  Similarity=-0.000  Sum_probs=57.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+..+.     .+....+...+.+++.+|+.|.+.+.+.+.
T Consensus         1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (239)
T PRK12828          1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL-----SQTLPGVPADALRIGGIDLVDPQAARRAVD   74 (239)
T ss_pred             CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH-----HHHHHHHhhcCceEEEeecCCHHHHHHHHH
Confidence            45556678999999999999999999999999999999975321     112223333467889999999998887653

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.28  E-value=2.5e-11  Score=87.71  Aligned_cols=74  Identities=22%  Similarity=0.261  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ...++|+|||||||||++++++|+++||+|++++|+............... ...+++++++|++|++.+.+.+.
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~  131 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLF  131 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHH
Confidence            456799999999999999999999999999999997643200000000011 12378999999999999988753

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.27  E-value=2.6e-11  Score=85.31  Aligned_cols=75  Identities=16%  Similarity=0.083  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh---hcCCCeEEEEeeCCChhhhhHHH
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE---FQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~---l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |....++|+||||+||||++++++|+++|++|++++|..... .......+..   .....++++++|++|.+.+.+.+
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   79 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNF-NTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWL   79 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccc-cccchhhhccccccccCceEEEEecCCCHHHHHHHH
Confidence            344568899999999999999999999999999999875321 0111111100   01235789999999999888765

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.27  E-value=3.5e-11  Score=82.50  Aligned_cols=75  Identities=12%  Similarity=0.059  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      .+++++||||+|+||++++++|+++|++|++++|+.      ++...+......++.++.+|++|++.+.+.+......+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~------~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE------AARADFEALHPDRALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCH------HHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999964      22222222222357889999999999988764433333


Q ss_pred             h
Q 037506           86 G   86 (91)
Q Consensus        86 ~   86 (91)
                      |
T Consensus        77 ~   77 (277)
T PRK06180         77 G   77 (277)
T ss_pred             C
Confidence            3

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.26  E-value=3.6e-11  Score=84.15  Aligned_cols=69  Identities=19%  Similarity=0.308  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++|++|++++|.....  ......+..+....+.++.+|++|++.+..++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   69 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALLTEIL   69 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCch--HhHHHHHHHhcCCCceEEEccCCCHHHHHHHH
Confidence            5799999999999999999999999999998753221  11111112222335688999999998888765

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.26  E-value=2.4e-11  Score=85.99  Aligned_cols=69  Identities=16%  Similarity=0.272  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+.|+|+||||+||||++++++|+++|++|++++|+....     ......+. ..+++++.+|++|.+.+.+++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS-----LHLLSKWKEGDRLRLFRADLQEEGSFDEAV   77 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH-----HHHHHhhccCCeEEEEECCCCCHHHHHHHH
Confidence            4578999999999999999999999999999999864221     11111111 235889999999998888764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.26  E-value=4.3e-11  Score=80.68  Aligned_cols=75  Identities=9%  Similarity=0.035  Sum_probs=56.2

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |-+++..++++||||+|+||++++++|+++|++|++++|+....     .+....+.  ...+.++++|++|++.+.+++
T Consensus         1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (262)
T PRK13394          1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA-----NAVADEINKAGGKAIGVAMDVTNEDAVNAGI   75 (262)
T ss_pred             CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH-----HHHHHHHHhcCceEEEEECCCCCHHHHHHHH
Confidence            44456678999999999999999999999999999999975221     11112222  224678999999999988875


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        76 ~~   77 (262)
T PRK13394         76 DK   77 (262)
T ss_pred             HH
Confidence            43

>PLN02214 cinnamoyl-CoA reductase

Probab=99.25  E-value=3.9e-11  Score=85.00  Aligned_cols=69  Identities=14%  Similarity=0.154  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+++|+||||+||||++++++|+++||+|++++|+....    ....+..+..  ..++++.+|++|.+.+.+++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   79 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDP----KNTHLRELEGGKERLILCKADLQDYEALKAAI   79 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhh----hHHHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence            457899999999999999999999999999999975321    1111112211  25788999999999888764

>PLN02686 cinnamoyl-CoA reductase

Probab=99.25  E-value=3.6e-11  Score=86.07  Aligned_cols=68  Identities=13%  Similarity=0.119  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--------CCCeEEEEeeCCChhhhhH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--------GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--------~~~v~~v~gDl~d~~~l~~   76 (91)
                      +.+++|+||||+||||++++++|+++||+|++++|+..      ....+..+.        ..+++++++|++|.+.+.+
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~------~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~  124 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE------DKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE  124 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH
Confidence            45678999999999999999999999999999888642      111111211        1257899999999998888


Q ss_pred             HH
Q 037506           77 QR   78 (91)
Q Consensus        77 ~~   78 (91)
                      ++
T Consensus       125 ~i  126 (367)
T PLN02686        125 AF  126 (367)
T ss_pred             HH
Confidence            65

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.24  E-value=6.1e-11  Score=82.78  Aligned_cols=69  Identities=12%  Similarity=0.069  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .++++||||+||||++++++|+++||+|++++|+....   ..........  ..+++++.+|++|++.+.+.+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   75 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR---KKTDHLLALDGAKERLKLFKADLLDEGSFELAI   75 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch---hhHHHHHhccCCCCceEEEeCCCCCchHHHHHH
Confidence            57899999999999999999999999999998875321   1111111111  135789999999998888765

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.24  E-value=5.1e-11  Score=84.20  Aligned_cols=69  Identities=14%  Similarity=0.163  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..|+|+||||+||||+++++.|+++|++|++++|+....  +...... .. ...++++.+|++|.+.+.+.+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~-~~-~~~~~~~~~Dl~~~~~~~~~~   71 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS--PNLFELL-NL-AKKIEDHFGDIRDAAKLRKAI   71 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccc--hhHHHHH-hh-cCCceEEEccCCCHHHHHHHH
Confidence            357899999999999999999999999999999875321  1111111 11 225778999999999888765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.24  E-value=3.6e-11  Score=85.14  Aligned_cols=72  Identities=18%  Similarity=0.229  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++||||||+||||+|.+-+|+++||.|.++++.....  .........+-.  .++.++++|++|.+.+++.+..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~   75 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE   75 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence            35899999999999999999999999999999865432  222233333332  5799999999999999998754

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.23  E-value=3.7e-11  Score=83.22  Aligned_cols=62  Identities=24%  Similarity=0.418  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+||||+||||+++++.|+++|++|++++|+....         ..+...+++++++|+.|.+.+.+++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~D~~~~~~l~~~~   62 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR---------RNLEGLDVEIVEGDLRDPASLRKAV   62 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc---------cccccCCceEEEeeCCCHHHHHHHH
Confidence            4799999999999999999999999999999975321         1122336889999999998888764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.23  E-value=6.2e-11  Score=78.81  Aligned_cols=72  Identities=13%  Similarity=0.080  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh--cCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF--QGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l--~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.+++|+||||||++|++++++|+++|++|+++.|.....    ........  ...++.++.+|+.|++.+.+.+..
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   77 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEA----AEELVEAVEALGRRAQAVQADVTDKAALEAAVAA   77 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHH----HHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHH
Confidence            4567999999999999999999999999998878764211    11111111  123588999999999998887543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.23  E-value=7.9e-11  Score=79.65  Aligned_cols=74  Identities=11%  Similarity=0.101  Sum_probs=55.9

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |..++..++++||||+|+||++++++|+++|++|++++|+..      .......+.  ...+.++.+|++|++.+.+.+
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   75 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL------VHEVAAELRAAGGEALALTADLETYAGAQAAM   75 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH------HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHH
Confidence            456677789999999999999999999999999999998631      111112222  224678899999998888765


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        76 ~~   77 (260)
T PRK12823         76 AA   77 (260)
T ss_pred             HH
Confidence            43

>PRK09135 pteridine reductase; Provisional

Probab=99.23  E-value=5.8e-11  Score=79.31  Aligned_cols=74  Identities=8%  Similarity=0.016  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++|+||||+|+||++++++|+++|++|++++|..... .+.....+.......+.++.+|++|.+.+.+.+..
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   78 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAE-ADALAAELNALRPGSAAALQADLLDPDALPELVAA   78 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            346899999999999999999999999999999864211 00000111111123578899999999988887543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.22  E-value=2.4e-11  Score=83.50  Aligned_cols=58  Identities=14%  Similarity=0.079  Sum_probs=49.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+||||||++|++++++|+++|++|++++|+.+..            ...+++.+.+|+.|++++.+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~------------~~~~~~~~~~d~~d~~~l~~a~   58 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS------------AGPNEKHVKFDWLDEDTWDNPF   58 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc------------cCCCCccccccCCCHHHHHHHH
Confidence            489999999999999999999999999999985321            1136777889999999998875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.22  E-value=6.2e-11  Score=79.26  Aligned_cols=71  Identities=8%  Similarity=-0.023  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++|+||||+|++|.+++++|+++|++|++++|+....     ......+.  ...+.++.+|+.|++.+.+.+..
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA-----AATAELVEAAGGKARARQVDVRDRAALKAAVAA   76 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999974211     11112222  22478899999999998887643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.22  E-value=7.5e-11  Score=79.24  Aligned_cols=70  Identities=10%  Similarity=-0.007  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++.+|+.|++.+.+++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   73 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA-----AAAAEALQKAGGKAIGVAMDVTDEEAINAGID   73 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            4457899999999999999999999999999999975321     11112221  2357889999999999888753

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.1e-10  Score=78.45  Aligned_cols=71  Identities=13%  Similarity=0.085  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++.++++||||+|+||++++++|+++|++|++++|+....    .......+.  ...+.++++|++|++.+.+.+.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   76 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR----ANKVVAEIEAAGGRASAVGADLTDEESVAALMD   76 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHh----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            5567899999999999999999999999999999864211    111111121  2357889999999998887653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.22  E-value=3.7e-11  Score=80.65  Aligned_cols=70  Identities=16%  Similarity=0.096  Sum_probs=51.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+++||||+|+||.+++++|+++|++|++++|+....  ....+.+......+++++++|+.|++.+.+.+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   70 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERL--ERLADDLRARGAVAVSTHELDILDTASHAAFL   70 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH--HHHHHHHHHhcCCeEEEEecCCCChHHHHHHH
Confidence            36899999999999999999999999999999975321  00111111111236889999999999888864

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.22  E-value=7.1e-11  Score=83.36  Aligned_cols=63  Identities=14%  Similarity=0.186  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCC-ChhhhhHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCD-VGQVTSSQ   77 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~-d~~~l~~~   77 (91)
                      +|+|+|||||||||++|+++|++. ||+|++++|...      +..  ......+++++.+|+. +.+.+.+.
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~------~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~   65 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD------RLG--DLVNHPRMHFFEGDITINKEWIEYH   65 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH------HHH--HhccCCCeEEEeCCCCCCHHHHHHH
Confidence            368999999999999999999986 699999998532      111  1112246899999997 66666554

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.22  E-value=1e-10  Score=77.74  Aligned_cols=71  Identities=10%  Similarity=0.104  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |.+++|+||||+|++|.+++++|+++|++|+++.|+....     ......+.  ...+.++.+|+.|++.+...+..
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA-----EALAAELRAAGGEARVLVFDVSDEAAVRALIEA   75 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH-----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999975321     11112222  23578889999999988776543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.21  E-value=8.6e-11  Score=80.25  Aligned_cols=65  Identities=20%  Similarity=0.244  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+++++||||+|+||++++++|+++|++|++++|+.      ++..   .+...+++++.+|++|++.+.+.+.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~------~~l~---~~~~~~~~~~~~Dv~~~~~~~~~~~   66 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV------DKME---DLASLGVHPLSLDVTDEASIKAAVD   66 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHH---HHHhCCCeEEEeeCCCHHHHHHHHH
Confidence            457899999999999999999999999999999964      2222   2223368899999999999888754

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.21  E-value=5.7e-11  Score=85.14  Aligned_cols=64  Identities=13%  Similarity=0.085  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..|+|+|||||||||++++++|.++||+|++++|.....     .   .. .....+++.+|++|.+.+.+.+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-----~---~~-~~~~~~~~~~Dl~d~~~~~~~~   83 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-----M---SE-DMFCHEFHLVDLRVMENCLKVT   83 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-----c---cc-ccccceEEECCCCCHHHHHHHH
Confidence            457999999999999999999999999999999864211     0   00 0113577888998877766643

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.1e-10  Score=78.46  Aligned_cols=73  Identities=14%  Similarity=0.048  Sum_probs=54.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      ++++||||+|+||++++++|+++|++|++++|....     ....+......++.++.+|++|++.+++.+...-..+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK-----ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSI   74 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH-----HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            589999999999999999999999999999986421     1111111112367889999999999988764433333

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.21  E-value=9.5e-11  Score=78.97  Aligned_cols=71  Identities=13%  Similarity=0.097  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +.++++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++.+.+.+...
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER-----LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALA   76 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999986421     111112222  235788999999999988875443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.21  E-value=8.9e-11  Score=82.64  Aligned_cols=68  Identities=18%  Similarity=0.273  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.|+|+||||+||||++++++|+++|  ++|++++|+...     .......+...+++++.+|++|++.+.+++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~   72 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK-----QWEMQQKFPAPCLRFFIGDVRDKERLTRAL   72 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH-----HHHHHHHhCCCcEEEEEccCCCHHHHHHHH
Confidence            45789999999999999999999986  789999886421     111111222236889999999999988765

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK06194 hypothetical protein; Provisional

Probab=99.21  E-value=9.1e-11  Score=80.45  Aligned_cols=70  Identities=10%  Similarity=0.010  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +.+++++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++.+|++|.+.+.+.+.
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   75 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL-----DRAVAELRAQGAEVLGVRTDVSDAAQVEALAD   75 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999864211     11112222  2346779999999998888653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.21  E-value=1.4e-10  Score=78.85  Aligned_cols=76  Identities=20%  Similarity=0.187  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.+.+.......+.++++|+.|++++.+.+......
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA------GLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999998642      222222111235788999999999888875443333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        77 ~g   78 (262)
T TIGR03325        77 FG   78 (262)
T ss_pred             hC
Confidence            33

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.21  E-value=1.4e-10  Score=78.38  Aligned_cols=78  Identities=18%  Similarity=0.208  Sum_probs=58.7

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |..++..++++||||+|+||.+++++|.++|++|.++.|...     +...   .+...++.++.+|++|++.+.+++..
T Consensus         1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~-----~~~~---~l~~~~~~~~~~Dl~~~~~~~~~~~~   72 (255)
T PRK06463          1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE-----NEAK---ELREKGVFTIKCDVGNRDQVKKSKEV   72 (255)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH-----HHHH---HHHhCCCeEEEecCCCHHHHHHHHHH
Confidence            666677789999999999999999999999999998876531     1221   22223578999999999999887644


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus        73 ~~~~~~   78 (255)
T PRK06463         73 VEKEFG   78 (255)
T ss_pred             HHHHcC
Confidence            333333

>PLN02240 UDP-glucose 4-epimerase

Probab=99.20  E-value=1e-10  Score=82.28  Aligned_cols=72  Identities=18%  Similarity=0.150  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++++|+|||||||+|++++++|+++|++|++++|.....  ..........   ...+++++.+|++|++.+.+++
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~   77 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSS--EEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVF   77 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcch--HHHHHHHHHhhcccCccceEEecCcCCHHHHHHHH
Confidence            3457899999999999999999999999999998754221  1111111111   1235789999999999888764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.1e-10  Score=79.41  Aligned_cols=65  Identities=14%  Similarity=0.126  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+....         .  ...+++++++|++|++++.+++...
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~---------~--~~~~~~~~~~D~~d~~~~~~~~~~~   67 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---------A--PIPGVELLELDVTDDASVQAAVDEV   67 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc---------c--ccCCCeeEEeecCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999974221         1  1236889999999999998876443

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.2e-10  Score=78.61  Aligned_cols=73  Identities=14%  Similarity=0.066  Sum_probs=54.8

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..+..++++||||+|+||++++++|+++|++|++++|+...     ............+.++.+|++|++.+.+.+..
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA-----LAATAARLPGAKVTATVADVADPAQVERVFDT   79 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHhcCceEEEEccCCCHHHHHHHHHH
Confidence            34566899999999999999999999999999999996421     11111222222568899999999988876543

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.7e-10  Score=77.92  Aligned_cols=74  Identities=11%  Similarity=0.125  Sum_probs=58.4

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+.++..++++||||+|+||++++++|+++|++|++++|+...      ......+.  ..++.++.+|++|++++.+.+
T Consensus         1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (258)
T PRK08628          1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD------DEFAEELRALQPRAEFVQVDLTDDAQCRDAV   74 (258)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhh------HHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            6777888899999999999999999999999999999987531      12222221  235788999999999988876


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        75 ~~   76 (258)
T PRK08628         75 EQ   76 (258)
T ss_pred             HH
Confidence            44

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.5e-10  Score=79.07  Aligned_cols=66  Identities=14%  Similarity=0.077  Sum_probs=51.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++++||||+|+||++++++|+++|++|+++.|+.      +....+......++.++++|++|.+++.+.+.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   68 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRP------DALDDLKARYGDRLWVLQLDVTDSAAVRAVVD   68 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHhccCceEEEEccCCCHHHHHHHHH
Confidence            6799999999999999999999999999999864      22222222112368899999999998888653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.20  E-value=4.6e-11  Score=80.82  Aligned_cols=61  Identities=20%  Similarity=0.245  Sum_probs=52.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||+|++++++|+++||+|++++|+..      +...   +. .++++..+|+.++..+...+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~------~~~~---~~-~~v~~~~~d~~~~~~l~~a~   61 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPE------AAAA---LA-GGVEVVLGDLRDPKSLVAGA   61 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHH------HHHh---hc-CCcEEEEeccCCHhHHHHHh
Confidence            57999999999999999999999999999999853      2222   22 58999999999999988875

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.20  E-value=8.4e-11  Score=78.86  Aligned_cols=63  Identities=22%  Similarity=0.323  Sum_probs=51.3

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+|+||||.+|+++++.|++.+++|++++|+.+       ......++..+++++++|+.|++++.+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~-------~~~~~~l~~~g~~vv~~d~~~~~~l~~al~   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS-------SDRAQQLQALGAEVVEADYDDPESLVAALK   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH-------HHHHHHHHHTTTEEEES-TT-HHHHHHHHT
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc-------hhhhhhhhcccceEeecccCCHHHHHHHHc
Confidence            799999999999999999999999999999852       122234455689999999999999999873

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.19  E-value=1e-10  Score=82.51  Aligned_cols=70  Identities=17%  Similarity=0.126  Sum_probs=47.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +++|+|||||||||+++++.|+++|++++++.++....  . ....+... ....+.++.+|++|.+.+.+.+.
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   71 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA--G-NLMSLAPVAQSERFAFEKVDICDRAELARVFT   71 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc--c-chhhhhhcccCCceEEEECCCcChHHHHHHHh
Confidence            36899999999999999999999998866544332111  0 01111111 12357889999999998888753

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.19  E-value=1.7e-10  Score=78.32  Aligned_cols=74  Identities=9%  Similarity=-0.006  Sum_probs=58.6

Q ss_pred             CCCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|++..+.++||||+  +-||..++++|+++|++|++..|+..      ....+..+....+.++++|++|++++++.+
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   74 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR------MKKSLQKLVDEEDLLVECDVASDESIERAF   74 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH------HHHHHHhhccCceeEEeCCCCCHHHHHHHH
Confidence            8899999999999999  79999999999999999999988621      112223333335788999999999998875


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        75 ~~   76 (252)
T PRK06079         75 AT   76 (252)
T ss_pred             HH
Confidence            43

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.19  E-value=8.3e-11  Score=86.41  Aligned_cols=62  Identities=16%  Similarity=0.296  Sum_probs=44.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      ..|+|+|||||||||++|+++|+++|++|++++|.....  ..  .....+...+++++.+|+.++
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~--~~--~~~~~~~~~~~~~i~~D~~~~  179 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGR--KE--NVMHHFSNPNFELIRHDVVEP  179 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccc--hh--hhhhhccCCceEEEECCccCh
Confidence            457999999999999999999999999999998754321  11  111112233567777777654

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.19  E-value=2.5e-10  Score=77.71  Aligned_cols=73  Identities=11%  Similarity=0.112  Sum_probs=55.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      ++.++++||||+|+||++++++|+++|++|++++|+...     .......+ ...+.++.+|++|++.+.+.+.....
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN-----GAAVAASL-GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            556899999999999999999999999999999997421     11111222 23578899999999999887644333

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.18  E-value=1.1e-10  Score=78.18  Aligned_cols=70  Identities=10%  Similarity=0.079  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|+||.+++++|+++|++|++++|+....     ......+. ...+.++++|+.|++.+.+.+..
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   74 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA-----ERVAAEILAGGRAIAVAADVSDEADVEAAVAA   74 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999975221     11112221 23578999999999999887543

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.18  E-value=4.5e-11  Score=83.15  Aligned_cols=61  Identities=23%  Similarity=0.337  Sum_probs=47.5

Q ss_pred             EEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCC-eEEEEeeCCChhhhhHHH
Q 037506           11 LIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIG-VTIIENLCDVGQVTSSQR   78 (91)
Q Consensus        11 lItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~-v~~v~gDl~d~~~l~~~~   78 (91)
                      |||||+||+|++|+++|+++|  ++|+++++.....    ...   .+...+ .+++++|++|++.+.+++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~----~~~---~~~~~~~~~~~~~Di~d~~~l~~a~   64 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK----FLK---DLQKSGVKEYIQGDITDPESLEEAL   64 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc----cch---hhhcccceeEEEeccccHHHHHHHh
Confidence            699999999999999999999  7999999875322    111   122223 349999999999999985

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.18  E-value=9.5e-11  Score=79.63  Aligned_cols=76  Identities=18%  Similarity=0.124  Sum_probs=56.3

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~~l~~   76 (91)
                      |.+.+..++++||||+++||++++++|+++|++|++..|+..     +... ....+.   ...+.++.+|++|++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   76 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNV-----EEANKIAEDLEQKYGIKAKAYPLNILEPETYKE   76 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            456677789999999999999999999999999988876431     1211 111221   2357889999999999988


Q ss_pred             HHhhh
Q 037506           77 QRMRS   81 (91)
Q Consensus        77 ~~~~~   81 (91)
                      .+...
T Consensus        77 ~~~~~   81 (260)
T PRK08416         77 LFKKI   81 (260)
T ss_pred             HHHHH
Confidence            76443

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.18  E-value=7.7e-11  Score=81.07  Aligned_cols=60  Identities=18%  Similarity=0.268  Sum_probs=46.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |+|||||||||||++|+++|+++||+|++++|.....  .       ... .+++++.+|++|.+.+...
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~-------~~~-~~~~~~~~d~~~~~~~~~~   60 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL--D-------PLL-SGVEFVVLDLTDRDLVDEL   60 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccc--c-------ccc-cccceeeecccchHHHHHH
Confidence            3599999999999999999999999999999975432  0       001 3678888998887555543

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.18  E-value=1.8e-10  Score=76.80  Aligned_cols=70  Identities=17%  Similarity=0.079  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++|+||||+|++|++++++|+++|++|++++|+...     .......+.. ..++++++|+.|++.+.+.+..
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~   75 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE-----LEEAAAELNNKGNVLGLAADVRDEADVQRAVDA   75 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH-----HHHHHHHHhccCcEEEEEccCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999996421     1111122221 4688999999999988887543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.18  E-value=1.8e-10  Score=77.91  Aligned_cols=66  Identities=17%  Similarity=0.163  Sum_probs=53.8

Q ss_pred             CCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            2 EGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         2 ~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +.++..++++||||+|+||++++++|.++|++|++++|+....           . ...+.++++|+.|++.+.+.+.
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~-~~~~~~~~~D~~~~~~~~~~~~   69 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------L-PEGVEFVAADLTTAEGCAAVAR   69 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------c-CCceeEEecCCCCHHHHHHHHH
Confidence            4456778999999999999999999999999999999974210           1 2257889999999998887653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.18  E-value=2.1e-10  Score=77.35  Aligned_cols=66  Identities=17%  Similarity=0.166  Sum_probs=51.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+|+||||||+||.++++.|+++|++|++++|+.      ++...+.......+.++.+|+.|.+++...+.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~   66 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ------ERLQELKDELGDNLYIAQLDVRNRAAIEEMLA   66 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhccceEEEEecCCCHHHHHHHHH
Confidence            5799999999999999999999999999999964      22222222112367889999999998887654

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.17  E-value=2.4e-10  Score=77.36  Aligned_cols=75  Identities=11%  Similarity=0.059  Sum_probs=57.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~   76 (91)
                      |.+.+..++++||||+|+||.+++++|+++|++|++++|+...     .......+.    ...+.++++|++|++.+.+
T Consensus         1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   75 (260)
T PRK07063          1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL-----AERAAAAIARDVAGARVLAVPADVTDAASVAA   75 (260)
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhccCCceEEEEEccCCCHHHHHH
Confidence            5566778899999999999999999999999999999996421     111112222    2347789999999998888


Q ss_pred             HHhh
Q 037506           77 QRMR   80 (91)
Q Consensus        77 ~~~~   80 (91)
                      .+..
T Consensus        76 ~~~~   79 (260)
T PRK07063         76 AVAA   79 (260)
T ss_pred             HHHH
Confidence            7643

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.17  E-value=1.7e-10  Score=77.12  Aligned_cols=74  Identities=19%  Similarity=0.151  Sum_probs=55.1

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |..++..++++||||+|+||++++++|+++|++|++++|+....     .+....+.  ...+.++.+|++|++++.+++
T Consensus         1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   75 (239)
T PRK07666          1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-----KAVAEEVEAYGVKVVIATADVSDYEEVTAAI   75 (239)
T ss_pred             CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHHhCCeEEEEECCCCCHHHHHHHH
Confidence            33445567899999999999999999999999999999974211     11111222  235788999999999988875


Q ss_pred             h
Q 037506           79 M   79 (91)
Q Consensus        79 ~   79 (91)
                      .
T Consensus        76 ~   76 (239)
T PRK07666         76 E   76 (239)
T ss_pred             H
Confidence            4

>PRK05717 oxidoreductase; Validated

Probab=99.17  E-value=3.2e-10  Score=76.69  Aligned_cols=68  Identities=10%  Similarity=0.044  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++++||||+|+||++++++|+++|++|++++|+...     .......+ ...+.++.+|++|++.+.+++..
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   77 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRER-----GSKVAKAL-GENAWFIAMDVADEAQVAAGVAE   77 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHH-----HHHHHHHc-CCceEEEEccCCCHHHHHHHHHH
Confidence            4789999999999999999999999999999886421     11111122 23578899999999988776543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.17  E-value=2.8e-10  Score=75.47  Aligned_cols=62  Identities=21%  Similarity=0.282  Sum_probs=49.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+|||||||||++++++|+++|+.|+.+.|.....     ..  ... ..+++++.+|+.|.+.+.+.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~-----~~--~~~-~~~~~~~~~dl~~~~~~~~~~~   62 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSE-----SF--EEK-KLNVEFVIGDLTDKEQLEKLLE   62 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGG-----HH--HHH-HTTEEEEESETTSHHHHHHHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccc-----cc--ccc-cceEEEEEeecccccccccccc
Confidence            79999999999999999999999999999875321     11  111 1278999999999999988763

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.16  E-value=3.2e-10  Score=75.90  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=51.6

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++..++++||||+|+||++++++|+++|++|++++|+..      ... ....+ ...+.++++|+.|.+.+.+.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   71 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPA------SLEAARAEL-GESALVIRADAGDVAAQKALA   71 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHH------HHHHHHHHh-CCceEEEEecCCCHHHHHHHH
Confidence            345678999999999999999999999999999988632      111 11122 235778999999988877654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.16  E-value=3.1e-10  Score=77.45  Aligned_cols=73  Identities=14%  Similarity=0.069  Sum_probs=54.6

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHH
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      -+|..++++||||+|+||++++++|+++|++|++++|+....     ......+.    ...+.++.+|+.|++.+.+.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKL-----AAAAEEIEALKGAGAVRYEPADVTDEDQVARAV   77 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhccCCCceEEEEcCCCCHHHHHHHH
Confidence            346678999999999999999999999999999999864211     11112221    135788899999999888765


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        78 ~~   79 (276)
T PRK05875         78 DA   79 (276)
T ss_pred             HH
Confidence            43

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.15  E-value=3.4e-10  Score=77.44  Aligned_cols=69  Identities=14%  Similarity=0.058  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.+.|+||||+|+||++++++|+++|++|++++|+..      ....+.......+.++++|++|++.+.+.+..
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTA------TLADLAEKYGDRLLPLALDVTDRAAVFAAVET   70 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHhccCCeeEEEccCCCHHHHHHHHHH
Confidence            3468999999999999999999999999999999742      22211111123578889999999998876543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.15  E-value=1.9e-10  Score=84.40  Aligned_cols=36  Identities=19%  Similarity=0.473  Sum_probs=33.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..|+|+|||||||||++|+++|+++||+|++++|..
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~  154 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF  154 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            347999999999999999999999999999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.15  E-value=2.6e-10  Score=77.23  Aligned_cols=66  Identities=11%  Similarity=-0.050  Sum_probs=51.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++++||||||+||++++++|+++|++|++++|+..      ..+.+ ..+....+.++.+|++|.+.+.+.+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   67 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEA------GLAALAAELGAGNAWTGALDVTDRAAWDAAL   67 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH------HHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            367999999999999999999999999999998642      22111 2222346889999999999888765

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.14  E-value=1.6e-10  Score=88.26  Aligned_cols=63  Identities=10%  Similarity=0.163  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhh-hhHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQV-TSSQ   77 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~-l~~~   77 (91)
                      +|+|+|||||||||++|+++|+++ ||+|++++|.....      .  ......+++++.+|++|... +.++
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~------~--~~~~~~~~~~~~gDl~d~~~~l~~~  379 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI------S--RFLGHPRFHFVEGDISIHSEWIEYH  379 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh------h--hhcCCCceEEEeccccCcHHHHHHH
Confidence            468999999999999999999986 79999999975321      1  11122368999999998654 4443

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.2e-10  Score=78.31  Aligned_cols=72  Identities=8%  Similarity=0.029  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++.++||||+|++|+++++.|+++|++|++++|+....  .+......... ...+.++.+|++|++.+.+ +..
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~   74 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQ--ENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQL   74 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHH--HHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHH
Confidence            456799999999999999999999999999999874211  00001111111 2357899999999998876 433

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.3e-10  Score=77.69  Aligned_cols=72  Identities=10%  Similarity=0.059  Sum_probs=53.9

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+..+.++||||+++||.+++++|+++|++|++++|+....     ......+.    ...+.++.+|++|++++.+.+.
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   79 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERL-----ASAEARLREKFPGARLLAARCDVLDEADVAAFAA   79 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHH
Confidence            45567899999999999999999999999999999974221     11111111    1256788999999999988754


Q ss_pred             h
Q 037506           80 R   80 (91)
Q Consensus        80 ~   80 (91)
                      .
T Consensus        80 ~   80 (265)
T PRK07062         80 A   80 (265)
T ss_pred             H
Confidence            3

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.14  E-value=3.6e-10  Score=75.64  Aligned_cols=74  Identities=14%  Similarity=0.071  Sum_probs=55.5

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++.+|++|++++.+.+
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA-----RELAAALEAAGGRAHAIAADLADPASVQRFF   75 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            44456678999999999999999999999999999998864211     11112222  235788999999999988865


Q ss_pred             h
Q 037506           79 M   79 (91)
Q Consensus        79 ~   79 (91)
                      .
T Consensus        76 ~   76 (250)
T PRK12939         76 D   76 (250)
T ss_pred             H
Confidence            3

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.3e-10  Score=77.82  Aligned_cols=71  Identities=15%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||.+++++|+++|++|++++|+....     ......+.  ..++.++.+|++|++.+.+.+..
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL-----DEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQ   80 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            4467899999999999999999999999999999974211     11112221  23578899999999998876543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.13  E-value=5.6e-10  Score=74.91  Aligned_cols=74  Identities=16%  Similarity=0.183  Sum_probs=53.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      .++++||||+|+||+++++.|+++|++|++..++..     .+...+ ..+ ...+.++++|+.|++.+.+++......+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE-----DAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH-----HHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999988766431     122111 112 2367889999999999888764444444


Q ss_pred             h
Q 037506           86 G   86 (91)
Q Consensus        86 ~   86 (91)
                      |
T Consensus        79 g   79 (253)
T PRK08642         79 G   79 (253)
T ss_pred             C
Confidence            4

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.13  E-value=5.4e-10  Score=75.86  Aligned_cols=72  Identities=19%  Similarity=0.167  Sum_probs=54.7

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++..++++||||+|+||++++++|+++|++|++++|+.      ++.+.+.......+.++++|++|++.+.+.+...
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSA------EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT   74 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence            35567899999999999999999999999999999864      2222221111235788999999999888876443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.13  E-value=4.4e-10  Score=75.63  Aligned_cols=71  Identities=17%  Similarity=0.250  Sum_probs=52.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++.++||||+|+||++++++|+++|++|++++|....    ........+.  ..++.++++|++|++.+.+.+.+.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDE----ELAATQQELRALGVEVIFFPADVADLSAHEAMLDAA   74 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchh----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            3679999999999999999999999999999986421    1111112221  235789999999999888865433

>PLN02253 xanthoxin dehydrogenase

Probab=99.13  E-value=4.7e-10  Score=76.76  Aligned_cols=71  Identities=13%  Similarity=0.048  Sum_probs=53.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|....     .......+. ..++.++++|++|++.+.+++..
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   87 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL-----GQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDF   87 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHhcCCCceEEEEeecCCHHHHHHHHHH
Confidence            456789999999999999999999999999999986421     111112222 23578999999999999887543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.13  E-value=5.6e-10  Score=75.48  Aligned_cols=70  Identities=9%  Similarity=0.023  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ...++++||||+|+||++++++|+++|++|++++|+...     .......+ ...+.++.+|++|++.+.+.+..
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   73 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPAR-----ARLAALEI-GPAAIAVSLDVTRQDSIDRIVAA   73 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHH-----HHHHHHHh-CCceEEEEccCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999987421     11111222 23578899999999999887644

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.13  E-value=6.9e-10  Score=74.03  Aligned_cols=70  Identities=19%  Similarity=0.131  Sum_probs=52.7

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +++.++++||||+|+||++++++|+++|+.|.+..|+.      ++.+.+.......+.++.+|+.|.+.+.+.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV------EKLEALAAELGERVKIFPANLSDRDEVKALGQ   72 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH------HHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            35568999999999999999999999999888887753      22221111112357889999999999888653

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.13  E-value=4.1e-10  Score=75.88  Aligned_cols=76  Identities=14%  Similarity=0.090  Sum_probs=56.2

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |...+..++++||||+|+||.+++++|.++|++|++++|+....     ......+.  ...+.++.+|++|.+.+.+.+
T Consensus         1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   75 (253)
T PRK06172          1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG-----EETVALIREAGGEALFVACDVTRDAEVKALV   75 (253)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            44445568999999999999999999999999999999974221     11111221  235788999999999888865


Q ss_pred             hhh
Q 037506           79 MRS   81 (91)
Q Consensus        79 ~~~   81 (91)
                      ...
T Consensus        76 ~~~   78 (253)
T PRK06172         76 EQT   78 (253)
T ss_pred             HHH
Confidence            443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.12  E-value=4.1e-10  Score=74.92  Aligned_cols=69  Identities=10%  Similarity=0.112  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..++++||||||++|+++++.|+++|++|+++.|+....    .......+.  ...+.++++|++|++.+.+.+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG----AEALVAEIGALGGKALAVQGDVSDAESVERAV   74 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            457899999999999999999999999998888864211    111112221  235788899999999887764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.12  E-value=5e-10  Score=77.14  Aligned_cols=72  Identities=8%  Similarity=-0.031  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..+.++||||+|+||++++++|.++|++|++.+|+...     .......+..  ..+.++.+|++|++++.+.+...
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~-----l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   77 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPG-----LRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEA   77 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            556789999999999999999999999999999987421     1112222322  24678899999999998875443

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.12  E-value=4e-10  Score=76.37  Aligned_cols=67  Identities=13%  Similarity=0.151  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCC-CeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGI-GVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~-~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +++++||||+|+||.++++.|+++|++|++++|+..      +... ...+... .+.++.+|++|++++.+.+.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~   70 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTD------ALQAFAARLPKAARVSVYAADVRDADALAAAAA   70 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHH
Confidence            468999999999999999999999999999998742      2211 1222211 57889999999999888653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.12  E-value=5.3e-10  Score=75.52  Aligned_cols=71  Identities=10%  Similarity=0.124  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     .......+..  ..+.++.+|+.|++.+.+.+..
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK-----LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA   80 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence            456799999999999999999999999999999987421     1111122222  2477889999999998887543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.12  E-value=3.1e-10  Score=74.97  Aligned_cols=64  Identities=17%  Similarity=0.233  Sum_probs=50.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+++||||+|++|+++++.|+++ ++|++++|+..      +...+.. ...+++++++|+.|++.+.+.+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~------~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~   66 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAE------RLDELAA-ELPGATPFPVDLTDPEAIAAAV   66 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHH------HHHHHHH-HhccceEEecCCCCHHHHHHHH
Confidence            578999999999999999999999 99999999642      2211111 1125789999999999888865

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.12  E-value=4.8e-10  Score=76.06  Aligned_cols=65  Identities=20%  Similarity=0.223  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh-hhhhHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG-QVTSSQ   77 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~-~~l~~~   77 (91)
                      .+|+|+||||||+||++++++|+++||+|++++|+..      +...... ...+++++++|++|. +.+.+.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~------~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~   81 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVD------KAKTSLP-QDPSLQIVRADVTEGSDKLVEA   81 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHH------HHHHhcc-cCCceEEEEeeCCCCHHHHHHH
Confidence            4578999999999999999999999999999999742      1111111 123689999999983 555554

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.12  E-value=1.8e-10  Score=80.08  Aligned_cols=69  Identities=14%  Similarity=0.094  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..++|+||||+|+||++++++|+++|++|++++|+....     ......+.    ...+.++.+|+.|.+.+.+++.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~   87 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKG-----KAAAARITAATPGADVTLQELDLTSLASVRAAAD   87 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            457899999999999999999999999999999974211     11111121    2357889999999999888653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.11  E-value=5.6e-10  Score=76.65  Aligned_cols=64  Identities=19%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +++++||||+|+||++++++|.++|++|++++|+.      ++..   .+...+++++.+|++|++++...+.
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~------~~~~---~l~~~~~~~~~~Dl~d~~~~~~~~~   67 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKE------EDVA---ALEAEGLEAFQLDYAEPESIAALVA   67 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHH---HHHHCCceEEEccCCCHHHHHHHHH
Confidence            46799999999999999999999999999999964      2222   2223468899999999998888653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.11  E-value=3.4e-10  Score=76.17  Aligned_cols=69  Identities=16%  Similarity=0.128  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..++++||||+|+||+++++.|+++|++|+++.|+....     ......+    ....+.++.+|++|++.+.+++.
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL-----NELLESLGKEFKSKKLSLVELDITDQESLEEFLS   75 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH-----HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHH
Confidence            457899999999999999999999999999998864211     1111112    12245678999999999888754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.11  E-value=3e-10  Score=76.19  Aligned_cols=66  Identities=15%  Similarity=0.059  Sum_probs=50.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++++||||+|++|++++++|+++|++|++++|+....     ......+.  ...+.++++|+.|++++.+.+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   69 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGA-----EAAAKVATDAGGSVIYLVADVTKEDEIADMI   69 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            5799999999999999999999999999999974211     11111111  235788999999999887754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.11  E-value=3.8e-10  Score=76.39  Aligned_cols=71  Identities=18%  Similarity=0.148  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||+++++.|+++|++|++++|+...     .......+.  ...+.++++|++|++.+.+.+..
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~   82 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE-----LEEAAAHLEALGIDALWIAADVADEADIERLAEE   82 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999986421     111112222  23567899999999999776543

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.11  E-value=4.4e-10  Score=75.39  Aligned_cols=72  Identities=11%  Similarity=0.088  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|.....     ......+.  ...+.++.+|++|.+++.+.....
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA-----ERVAKQIVADGGTAIAVQVDVSDPDSAKAMADAT   77 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999974211     11112221  224678899999999888765443

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.11  E-value=7.1e-10  Score=74.85  Aligned_cols=68  Identities=7%  Similarity=0.100  Sum_probs=52.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++++||||+|+||++++++|+++|++|++++|+...     .......+....+.++.+|+.|.+.+.+.+..
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAA-----LAAFADALGDARFVPVACDLTDAASLAAALAN   70 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            579999999999999999999999999999986421     11112223334678999999999998876644

>PRK06398 aldose dehydrogenase; Validated

Probab=99.10  E-value=7.8e-10  Score=75.24  Aligned_cols=63  Identities=13%  Similarity=0.045  Sum_probs=52.6

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +++.++++||||+|+||++++++|.++|++|++++|+...              ...+.++++|++|++.+.+++..
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~   65 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS--------------YNDVDYFKVDVSNKEQVIKGIDY   65 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc--------------cCceEEEEccCCCHHHHHHHHHH
Confidence            3566899999999999999999999999999999986421              11578899999999998887644

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.10  E-value=4.9e-10  Score=76.46  Aligned_cols=76  Identities=14%  Similarity=0.043  Sum_probs=55.6

Q ss_pred             CCCCCC--CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNT--KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~--~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~   76 (91)
                      |++.|.  .++++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++.+|++|++++.+
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~   75 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV-----DAAVAQLQQAGPEGLGVSADVRDYAAVEA   75 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHHhCCceEEEECCCCCHHHHHH
Confidence            455544  46899999999999999999999999999999874211     11111221  2346788999999999888


Q ss_pred             HHhhh
Q 037506           77 QRMRS   81 (91)
Q Consensus        77 ~~~~~   81 (91)
                      .+...
T Consensus        76 ~~~~~   80 (264)
T PRK07576         76 AFAQI   80 (264)
T ss_pred             HHHHH
Confidence            76443

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.10  E-value=9.4e-10  Score=74.49  Aligned_cols=71  Identities=17%  Similarity=0.115  Sum_probs=54.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++..++++||||+|+||++++++|+++|++|++++|+..      .......+.  ...+.++.+|+.|++.+.+.+..
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   75 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE------IEKLADELCGRGHRCTAVVADVRDPASVAAAIKR   75 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH------HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999998642      111112221  23577899999999998887543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.09  E-value=6.6e-10  Score=74.72  Aligned_cols=65  Identities=17%  Similarity=0.096  Sum_probs=51.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++++||||+|+||.+++++|+++|++|++++|+.      ++.+.+... ...+.++.+|++|++.+++.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   66 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ------SVLDELHTQ-SANIFTLAFDVTDHPGTKAALS   66 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH------HHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHH
Confidence            5799999999999999999999999999999963      222222211 2357889999999999988753

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.09  E-value=5.1e-10  Score=74.91  Aligned_cols=69  Identities=17%  Similarity=0.191  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+++++||||+|++|++++++|+++|++|++++|+...     .......+.  ..++.++.+|++|++.+.+.+.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDA-----LEALAAELRSTGVKAAAYSIDLSNPEAIAPGIA   75 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHH
Confidence            35689999999999999999999999999999997421     111111111  2357889999999998887654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.09  E-value=9.6e-10  Score=73.77  Aligned_cols=70  Identities=10%  Similarity=0.008  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..    ......+... ...+.++++|++|++.+...+.
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   72 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP----SETQQQVEAL-GRRFLSLTADLSDIEAIKALVD   72 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH----HHHHHHHHhc-CCceEEEECCCCCHHHHHHHHH
Confidence            45678999999999999999999999999999998631    1111111211 2357899999999999987653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07985 oxidoreductase; Provisional

Probab=99.09  E-value=8e-10  Score=76.82  Aligned_cols=73  Identities=16%  Similarity=0.168  Sum_probs=52.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhh-hhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++..|+...    +..+.+. .+.  ...+.++.+|++|++.+.+.+...
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE----EDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcch----hhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999988765321    1111111 111  224678899999999888875443

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.09  E-value=6.2e-10  Score=78.46  Aligned_cols=68  Identities=13%  Similarity=0.120  Sum_probs=47.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+|+|||||||||++++++|+++|++ |+.++|.....    .......+. ...++++.+|++|.+.+.+++.
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   70 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAG----NLESLADVSDSERYVFEHADICDRAELDRIFA   70 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccc----hHHHHHhcccCCceEEEEecCCCHHHHHHHHH
Confidence            47999999999999999999999976 55555532111    111111111 2357889999999998888753

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.09  E-value=9.4e-10  Score=74.38  Aligned_cols=71  Identities=11%  Similarity=0.033  Sum_probs=53.9

Q ss_pred             CCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            2 EGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         2 ~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+..++|+||||+|+||.+++++|+++|++|++++|+...     .......+   ...++++|++|++.+.+.+..
T Consensus         2 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~   72 (255)
T PRK06057          2 SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA-----GKAAADEV---GGLFVPTDVTDEDAVNALFDT   72 (255)
T ss_pred             CccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHc---CCcEEEeeCCCHHHHHHHHHH
Confidence            456777899999999999999999999999999999986421     11111112   236889999999988887543

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.09  E-value=4.8e-10  Score=75.21  Aligned_cols=69  Identities=10%  Similarity=0.061  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..++++||||+|+||++++++|+++|++|+++.|+....     ......+ ....+.++++|++|++++.+.+.
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA-----ERVAAAIAAGGRAFARQGDVGSAEAVEALVD   73 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH-----HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            456899999999999999999999999999999874211     1111112 12357889999999999988653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.09  E-value=6.7e-10  Score=75.89  Aligned_cols=63  Identities=21%  Similarity=0.294  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++++||||+|+||++++++|.++|++|++++|+.      ++..   .+...++.++.+|+.|++.+.+.+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~------~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~   63 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKA------EDVE---ALAAAGFTAVQLDVNDGAALARLA   63 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHH---HHHHCCCeEEEeeCCCHHHHHHHH
Confidence            36899999999999999999999999999999864      1221   122236788999999999888765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.09  E-value=8.5e-10  Score=74.79  Aligned_cols=77  Identities=14%  Similarity=0.062  Sum_probs=55.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +..++++||||++.||++++++|+++|++|+++.|...    +.....+... ...+.++.+|++|++.+.+.+...-..
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~----~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA----PETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH----HHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999887531    1111111211 235788999999999998876544333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        81 ~g   82 (251)
T PRK12481         81 MG   82 (251)
T ss_pred             cC
Confidence            44

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.08  E-value=5.9e-10  Score=74.66  Aligned_cols=68  Identities=10%  Similarity=0.136  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+++++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++++|+.|.+.+++.+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   71 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREA-----AEKVAADIRAKGGNAQAFACDITDRDSVDTAV   71 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            35789999999999999999999999999999986421     111111121  235889999999999888865

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.08  E-value=5.6e-10  Score=78.15  Aligned_cols=70  Identities=19%  Similarity=0.131  Sum_probs=53.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +.+++++||||+|+||.+++++|+++|++|++++|+....     ......+.  ...+.++.+|++|.+++++++.
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   75 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA-----EAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD   75 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence            3567899999999999999999999999999999864211     11112221  2357889999999999988753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.08  E-value=6.6e-10  Score=84.69  Aligned_cols=70  Identities=9%  Similarity=0.078  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhh-hcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~-l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ...|+|||||||||||++++++|+++  +++|++++|.....    ....+.. ....+++++.+|++|.+.+.+.+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~----~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~   76 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCS----NLKNLNPSKSSPNFKFVKGDIASADLVNYLL   76 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccc----hhhhhhhcccCCCeEEEECCCCChHHHHHHH
Confidence            34689999999999999999999997  68999998753111    1111111 11246899999999988777654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.08  E-value=1.1e-09  Score=74.15  Aligned_cols=72  Identities=13%  Similarity=0.096  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||.+++++|++.|++|+++.|+. .   .+... ..... ...+.++++|++|.+.+.+.+...
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~   85 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-N---WDETRRLIEKE-GRKVTFVQVDLTKPESAEKVVKEA   85 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-H---HHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999862 1   11111 11111 235789999999999888875433

>PRK06196 oxidoreductase; Provisional

Probab=99.07  E-value=8.1e-10  Score=77.24  Aligned_cols=67  Identities=16%  Similarity=0.102  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++|+||||+|+||++++++|+++|++|++++|+..      +.. ....+.  .+.++++|++|.+++++++.
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~------~~~~~~~~l~--~v~~~~~Dl~d~~~v~~~~~   91 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPD------VAREALAGID--GVEVVMLDLADLESVRAFAE   91 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHhh--hCeEEEccCCCHHHHHHHHH
Confidence            34578999999999999999999999999999999742      221 112222  47899999999999888753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.07  E-value=5.5e-10  Score=76.81  Aligned_cols=66  Identities=14%  Similarity=0.246  Sum_probs=48.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|||||||||++++++|++++  ++|++++|..... ..+..   ..+ ...+++++.+|++|++.+.+++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~   69 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAG-NLENL---ADLEDNPRYRFVKGDIGDRELVSRLF   69 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcch-hhhhh---hhhccCCCcEEEEcCCcCHHHHHHHH
Confidence            58999999999999999999987  7898888743211 01111   111 1236789999999999988764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK06128 oxidoreductase; Provisional

Probab=99.07  E-value=9.5e-10  Score=76.41  Aligned_cols=80  Identities=18%  Similarity=0.161  Sum_probs=56.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++..++++||||+|+||++++++|+++|++|++..|+....   ........+.  ...+.++.+|++|++.+.+++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  128 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQ---DAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERA  128 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchH---HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHH
Confidence            35568999999999999999999999999998877653211   1111111222  234678999999999998876554


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus       129 ~~~~g  133 (300)
T PRK06128        129 VKELG  133 (300)
T ss_pred             HHHhC
Confidence            44444

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.07  E-value=9e-10  Score=73.47  Aligned_cols=71  Identities=10%  Similarity=0.121  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.+++++||||||+||.+++++|+++|++|+++ .|+....     ......+.  ...+.++.+|++|++.+.+.+..
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA-----QELLEEIKEEGGDAIAVKADVSSEEDVENLVEQ   76 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            345689999999999999999999999999998 7764211     11111121  23578899999999998886543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.07  E-value=1.7e-09  Score=72.80  Aligned_cols=68  Identities=12%  Similarity=0.120  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+..      .......+....+.++.+|++|++.+.+.+.
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED------VAEVAAQLLGGNAKGLVCDVSDSQSVEAAVA   81 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHhhCCceEEEEecCCCHHHHHHHHH
Confidence            4578999999999999999999999999999998642      1122222333356789999999998888653

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.07  E-value=3.4e-10  Score=75.08  Aligned_cols=60  Identities=23%  Similarity=0.243  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |||.|+||||.+|+++++.++++||+|++++|++++.         ..+  +++.+++.|+.|++.+.+.+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~---------~~~--~~~~i~q~Difd~~~~a~~l   60 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKL---------AAR--QGVTILQKDIFDLTSLASDL   60 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhc---------ccc--ccceeecccccChhhhHhhh
Confidence            6899999999999999999999999999999986432         112  37889999999998876654

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.7e-09  Score=72.21  Aligned_cols=72  Identities=15%  Similarity=0.121  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+|+++||||+|+||++++++|+++|++|++++|.....  .+.... ...+.  ...+.++.+|+.|++.+.+.+.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRG--RAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccccc--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            357899999999999999999999999999988754321  122111 11121  2357889999999998887653

>PRK08264 short chain dehydrogenase; Validated

Probab=99.06  E-value=1e-09  Score=73.26  Aligned_cols=65  Identities=14%  Similarity=0.147  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|+ +|++++|+...      ..   . ...++.++.+|+.|++.+.+.+.
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~------~~---~-~~~~~~~~~~D~~~~~~~~~~~~   69 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES------VT---D-LGPRVVPLQLDVTDPASVAAAAE   69 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh------hh---h-cCCceEEEEecCCCHHHHHHHHH
Confidence            3457899999999999999999999998 99999997521      11   1 22368899999999998887653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.06  E-value=8.8e-10  Score=75.55  Aligned_cols=73  Identities=14%  Similarity=0.093  Sum_probs=53.8

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++.++.++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++.+|++|++.+.+.+...
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKC-----EELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQA   81 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            34557899999999999999999999999999999864211     11111121  125778899999999998876443

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.4e-09  Score=74.18  Aligned_cols=68  Identities=12%  Similarity=-0.124  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||||.||++++++|+++|++|++.+|+.      ++.... ..+.  .+.++.+|++|++++.+.+..
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~------~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~   71 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDE------ALAKETAAELG--LVVGGPLDVTDPASFAAFLDA   71 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhc--cceEEEccCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999864      222211 1221  478899999999998876533

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.06  E-value=6.6e-10  Score=74.81  Aligned_cols=66  Identities=12%  Similarity=0.123  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-h--cCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-F--QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l--~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++|+||||||+||++++++|+++|++|++++|+..      ....+.. .  ...++.++.+|++|++.+.+++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   70 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAP------QVTALRAEAARRGLALRVEKLDLTDAIDRAQAA   70 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh
Confidence            357999999999999999999999999999999642      1111111 1  1235788999999998887764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.06  E-value=9.2e-10  Score=74.29  Aligned_cols=70  Identities=14%  Similarity=0.093  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|.||.+++++|.++|++|++++|+....     ......+.  ...+.++.+|+.|++.+.+.+..
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL-----DQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL   76 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            456899999999999999999999999999999874211     11112222  23578899999999988887543

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.6e-09  Score=75.25  Aligned_cols=74  Identities=14%  Similarity=0.139  Sum_probs=54.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++..++++||||+|+||.+++++|+++|++|+++.|+....    .......+.  ...+.++.+|++|.+.+.+.+...
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHED----ANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            34457899999999999999999999999999998864211    111111222  234778999999999888875443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.06  E-value=9.6e-10  Score=77.46  Aligned_cols=68  Identities=12%  Similarity=0.171  Sum_probs=52.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |++|||||+||||+++++.++++.  ++|++++...... +++..   ..+. .++..|+++|++|.+.+.+.+.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAg-n~~~l---~~~~~~~~~~fv~~DI~D~~~v~~~~~   71 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAG-NLENL---ADVEDSPRYRFVQGDICDRELVDRLFK   71 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccC-CHHHH---HhhhcCCCceEEeccccCHHHHHHHHH
Confidence            579999999999999999999875  5678888865433 33322   3333 3589999999999998888754

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.06  E-value=6.3e-10  Score=74.66  Aligned_cols=72  Identities=18%  Similarity=0.142  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-hcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +++++||||+|+||++++++|+++|++|++++|+....  .+....+.. .....+.++.+|++|++.+.+.+..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   74 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRL--EELKAELLARYPGIKVAVAALDVNDHDQVFEVFAE   74 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHH
Confidence            45799999999999999999999999999999974211  000011111 1123578899999999988886544

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.05  E-value=1e-09  Score=73.67  Aligned_cols=64  Identities=16%  Similarity=0.129  Sum_probs=50.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+++||||||+||++++++|+++|++|++++|+...    . .   .......+.++++|+.|.+++++.+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~----~-~---~~~~~~~~~~~~~D~~~~~~~~~~~   64 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP----S-L---AAAAGERLAEVELDLSDAAAAAAWL   64 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch----h-h---hhccCCeEEEEEeccCCHHHHHHHH
Confidence            3589999999999999999999999999999987421    1 1   1111235788999999999988854

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.05  E-value=1.4e-09  Score=73.79  Aligned_cols=76  Identities=14%  Similarity=0.097  Sum_probs=55.6

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |...+..++++||||+|+||.+++++|+++|+.|++..|+...    ........+.  ...+.++.+|++|.+++.+.+
T Consensus         1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~   76 (261)
T PRK08936          1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEE----EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLI   76 (261)
T ss_pred             CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Confidence            5556777899999999999999999999999999888885321    1111111222  234678899999999888865


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        77 ~~   78 (261)
T PRK08936         77 QT   78 (261)
T ss_pred             HH
Confidence            43

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.05  E-value=2.6e-09  Score=72.32  Aligned_cols=73  Identities=12%  Similarity=0.115  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|+||.++++.|+++|++|.++.+.....  .+.. .....+.  ...+.++++|++|++.+.+.+..
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAAS--KADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccc--hHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            457899999999999999999999999988887653221  1111 1112222  23578899999999999887643

>PRK12320 hypothetical protein; Provisional

Probab=99.05  E-value=6.6e-10  Score=85.59  Aligned_cols=56  Identities=14%  Similarity=0.114  Sum_probs=45.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~   76 (91)
                      |+|+||||+||||++++++|+++||+|++++|....            ....+++++++|++|+. +.+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~------------~~~~~ve~v~~Dl~d~~-l~~   56 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD------------ALDPRVDYVCASLRNPV-LQE   56 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh------------cccCCceEEEccCCCHH-HHH
Confidence            489999999999999999999999999999986321            11236788999998874 444

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.05  E-value=2e-09  Score=72.33  Aligned_cols=64  Identities=9%  Similarity=0.030  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..           . .....+.++++|++|++.+.+.+..
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~-----------~-~~~~~~~~~~~D~~~~~~~~~~~~~   69 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL-----------T-QEDYPFATFVLDVSDAAAVAQVCQR   69 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh-----------h-hcCCceEEEEecCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999998630           1 1123578899999999999887543

>PRK08643 acetoin reductase; Validated

Probab=99.05  E-value=1.2e-09  Score=73.74  Aligned_cols=69  Identities=10%  Similarity=0.043  Sum_probs=52.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+.++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++++|++|++.+.+.+..
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA-----QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ   72 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            35799999999999999999999999999999874211     11112222  23577899999999988886543

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.04  E-value=3.8e-10  Score=78.63  Aligned_cols=33  Identities=27%  Similarity=0.342  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+||||||+||||++++++|+++| +|++++|..
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~   33 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS   33 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc
Confidence            589999999999999999999999 799998864

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.04  E-value=9.3e-10  Score=73.82  Aligned_cols=70  Identities=16%  Similarity=0.120  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|+||++++++|+++|++|+++ .|+...     ..+....+.  ...+.++.+|++|++.+.+.+..
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA-----AEETAEEIEALGRKALAVKANVGDVEKIKEMFAQ   75 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            44689999999999999999999999998774 565311     111112221  23578899999999998887643

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.04  E-value=1.5e-09  Score=73.11  Aligned_cols=72  Identities=14%  Similarity=0.067  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|.++ .|+..     ........+.  ...+.++++|++|++++.+++...
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~   78 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQ-----AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQL   78 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHH
Confidence            445799999999999999999999999999876 45421     1111112222  235788999999999998876443

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.04  E-value=1.2e-09  Score=73.59  Aligned_cols=70  Identities=16%  Similarity=0.195  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++|+||||+|+||++++++|+++|++|+++.|+..      +.+ ....+.  ..++.++.+|+++++.+.+.+..
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVE------RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH   79 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            44589999999999999999999999999999999742      221 112221  23578999999999988886543

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.04  E-value=1.3e-09  Score=73.62  Aligned_cols=72  Identities=21%  Similarity=0.142  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||.+++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++.+.+.+...
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA-----LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQV   80 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH-----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999986421     111112222  235778899999999998876443

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.04  E-value=1.3e-09  Score=73.50  Aligned_cols=65  Identities=17%  Similarity=0.136  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +     ......+.++++|+.|++++.+.+..
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~------~-----~~~~~~~~~~~~D~~~~~~~~~~~~~   68 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP------E-----TVDGRPAEFHAADVRDPDQVAALVDA   68 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh------h-----hhcCCceEEEEccCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999641      1     01123678899999999988887644

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.04  E-value=1.6e-09  Score=73.30  Aligned_cols=71  Identities=11%  Similarity=0.097  Sum_probs=52.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh--cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF--QGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l--~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .++++||||+|+||++++++|.++|++|+++.|....    ........+  ....+.++.+|++|.+.+.+.+.+.
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   81 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRD----EAEALAAEIRALGRRAVALQADLADEAEVRALVARA   81 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999888765311    111111112  1235788999999999988876443

>PRK08589 short chain dehydrogenase; Validated

Probab=99.04  E-value=1.7e-09  Score=74.07  Aligned_cols=77  Identities=12%  Similarity=0.039  Sum_probs=56.4

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++..++++||||+++||.+++++|+++|++|++++|+ ..     .......+.  ...+.++.+|++|++++.+.+...
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA-----VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH-----HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH
Confidence            3566789999999999999999999999999999987 21     111122222  224788999999999988875443


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus        77 ~~~~g   81 (272)
T PRK08589         77 KEQFG   81 (272)
T ss_pred             HHHcC
Confidence            33333

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.04  E-value=2.1e-09  Score=72.57  Aligned_cols=72  Identities=14%  Similarity=0.095  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++.+.+++...
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT-----LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARI   82 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999997421     111112222  234789999999999988876443

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.03  E-value=2e-09  Score=73.07  Aligned_cols=68  Identities=10%  Similarity=0.092  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..++++||||+|+||.+++++|+++|++|++++|+....     ......+ ....+.++.+|++|++.+.+.+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   72 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL-----EALAARLPYPGRHRWVVADLTSEAGREAVL   72 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            457899999999999999999999999999999974211     1111122 1236789999999999888764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.2e-09  Score=77.46  Aligned_cols=73  Identities=18%  Similarity=0.206  Sum_probs=55.2

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |-..+..+.++||||||.||++++++|.++|++|++++|+..      +.+ ....+.  ...+.++.+|++|++.+++.
T Consensus         1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~------~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~   74 (330)
T PRK06139          1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEE------ALQAVAEECRALGAEVLVVPTDVTDADQVKAL   74 (330)
T ss_pred             CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence            334456789999999999999999999999999999999642      221 112222  23467889999999999886


Q ss_pred             Hh
Q 037506           78 RM   79 (91)
Q Consensus        78 ~~   79 (91)
                      ..
T Consensus        75 ~~   76 (330)
T PRK06139         75 AT   76 (330)
T ss_pred             HH
Confidence            53

>PRK08017 oxidoreductase; Provisional

Probab=99.03  E-value=9e-10  Score=74.13  Aligned_cols=62  Identities=16%  Similarity=0.078  Sum_probs=49.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++++||||+|+||.++++.|.++|++|++++|+..      +.+.   +...+++++.+|+.|.+.+...+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~------~~~~---~~~~~~~~~~~D~~~~~~~~~~~   64 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPD------DVAR---MNSLGFTGILLDLDDPESVERAA   64 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HhHH---HHhCCCeEEEeecCCHHHHHHHH
Confidence            57999999999999999999999999999998642      2221   22236788999999998877654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.03  E-value=1.9e-09  Score=72.02  Aligned_cols=67  Identities=13%  Similarity=0.079  Sum_probs=52.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +++++||||+|+||++++++|.++|++|++++|+...     ..   ..+...++.++.+|+.|++.+.+.+...
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~   68 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP-----AI---DGLRQAGAQCIQADFSTNAGIMAFIDEL   68 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HH---HHHHHcCCEEEEcCCCCHHHHHHHHHHH
Confidence            4589999999999999999999999999999987421     11   1222235788999999999988876443

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.6e-09  Score=76.76  Aligned_cols=73  Identities=14%  Similarity=0.111  Sum_probs=54.8

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..+..++|+||||+|+||++++++|.++|++|++++|+...     .......+.  ...+.++.+|++|++++++.+..
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~-----l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~   78 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEG-----LEALAAEIRAAGGEALAVVADVADAEAVQAAADR   78 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence            34566789999999999999999999999999999986421     111112222  23577899999999999887543

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.4e-09  Score=73.46  Aligned_cols=69  Identities=19%  Similarity=0.134  Sum_probs=52.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++++||||+|+||+++++.|+++|++|++++|+....     ......+.  ...+.++++|++|++.+.+.+...
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL-----EEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI   72 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            6799999999999999999999999999999874211     11111121  235788999999999998875443

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.6e-09  Score=75.37  Aligned_cols=69  Identities=13%  Similarity=0.098  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||.++++.|+++|++|++++|+..      +.+ ....+.  ...+.++.+|+.|++++.+.+.
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~------~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~  109 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRED------LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA  109 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            44578999999999999999999999999999999742      211 112221  2246789999999998888654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.03  E-value=2e-09  Score=74.02  Aligned_cols=80  Identities=13%  Similarity=0.004  Sum_probs=58.5

Q ss_pred             CCCCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-C-CCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-G-IGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~-~~v~~v~gDl~d~~~l~~   76 (91)
                      ||+.+..+.++||||++  .||+.++++|.++|++|++..|+..      ..+....+. . ....++++|++|++++++
T Consensus         1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~------~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~   74 (271)
T PRK06505          1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA------LGKRVKPLAESLGSDFVLPCDVEDIASVDA   74 (271)
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH------HHHHHHHHHHhcCCceEEeCCCCCHHHHHH
Confidence            88999889999999996  8999999999999999999888531      111111121 1 123568999999999998


Q ss_pred             HHhhhhhhhh
Q 037506           77 QRMRSGRSLG   86 (91)
Q Consensus        77 ~~~~~~~~~~   86 (91)
                      .+...-..+|
T Consensus        75 ~~~~~~~~~g   84 (271)
T PRK06505         75 VFEALEKKWG   84 (271)
T ss_pred             HHHHHHHHhC
Confidence            7654433344

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.02  E-value=2.5e-09  Score=71.27  Aligned_cols=69  Identities=14%  Similarity=0.100  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~-~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++|+||||+|+||+++++.|.++|++|++++|+..      +...+ ..+. ..++.++++|++|++.+.+.+.+
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   74 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNEN------KLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEK   74 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999642      22111 1121 12578899999999988886533

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.02  E-value=2.8e-09  Score=72.12  Aligned_cols=72  Identities=10%  Similarity=0.089  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+.++||||+|+||++++++|.++|++|++++|+....    .......+.  ...+.++.+|+.|++.+.+.+..
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG----LAETAEHIEAAGRRAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999864211    111112222  23577899999999998887543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.02  E-value=1.8e-09  Score=73.00  Aligned_cols=72  Identities=10%  Similarity=-0.007  Sum_probs=51.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++|+||||+|+||++++++|.++|++|++++|+....  ....+.+... ....+.++.+|++|++.+...+..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   74 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA--ANVAQEINAEYGEGMAYGFGADATSEQSVLALSRG   74 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHH
Confidence            35799999999999999999999999999999864211  0011111111 113578999999999988876543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.02  E-value=1.9e-09  Score=71.81  Aligned_cols=64  Identities=20%  Similarity=0.117  Sum_probs=50.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++++||||+|++|++++++|.++|++|++++|+...      ...+..+  .++.++.+|++|++.+++.+
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~------~~~~~~~--~~~~~~~~D~~d~~~~~~~~   64 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ------DTALQAL--PGVHIEKLDMNDPASLDQLL   64 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc------hHHHHhc--cccceEEcCCCCHHHHHHHH
Confidence            3679999999999999999999999999999997532      1111222  25788899999998887754

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.8e-09  Score=72.68  Aligned_cols=74  Identities=12%  Similarity=0.076  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..++++||||+|+||.+++++|.++|++|++++|+....     ......+.  ...+.++++|+.|.+.+.+.+....
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC-----QAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999864211     11112222  1246789999999998887654433


Q ss_pred             h
Q 037506           83 R   83 (91)
Q Consensus        83 ~   83 (91)
                      .
T Consensus        81 ~   81 (252)
T PRK07035         81 E   81 (252)
T ss_pred             H
Confidence            3

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.01  E-value=2.6e-09  Score=71.65  Aligned_cols=71  Identities=11%  Similarity=0.014  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++|+||||+|+||++++++|+++|++|++..|+...    ........+.  ...+.++.+|+++++.+.+.+.+
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE----EMNETLKMVKENGGEGIGVLADVSTREGCETLAKA   77 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChH----HHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHH
Confidence            45789999999999999999999999999887765311    1111112222  12456789999999988776533

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.3e-09  Score=76.41  Aligned_cols=73  Identities=7%  Similarity=0.053  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+++||.+++++|+++|++|++..|+....  .+....+... ....+.++.+|+.|.++++++..
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~--~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~   85 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKG--EAAVAAIRTAVPDAKLSLRALDLSSLASVAALGE   85 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999974221  0001111111 12357899999999999988753

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.4e-09  Score=74.29  Aligned_cols=70  Identities=7%  Similarity=0.036  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++.+.++||||+|.||++++++|+++|++|++++|+....     ......+.   ..++.++.+|++|++.+++.+.
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENL-----KKAREKIKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999864211     11111221   2357889999999999988754

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.01  E-value=1.8e-09  Score=81.61  Aligned_cols=67  Identities=15%  Similarity=0.146  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc-----------CCCeEEEEeeCCChhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ-----------GIGVTIIENLCDVGQV   73 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~-----------~~~v~~v~gDl~d~~~   73 (91)
                      ..+.|+||||+|+||++++++|++.|++|++++|+..      +... ...+.           ..+++++++|+.|.+.
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~e------kl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQ------RAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHH------HHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            3468999999999999999999999999999999742      2111 11110           1247899999999998


Q ss_pred             hhHHH
Q 037506           74 TSSQR   78 (91)
Q Consensus        74 l~~~~   78 (91)
                      +.+++
T Consensus       153 I~~aL  157 (576)
T PLN03209        153 IGPAL  157 (576)
T ss_pred             HHHHh
Confidence            87764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.01  E-value=2.8e-09  Score=71.91  Aligned_cols=70  Identities=11%  Similarity=0.056  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|+||.+++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++.+.+.+..
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER-----AELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEH   79 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH-----HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999987421     111112222  22467789999999998887543

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.01  E-value=3.7e-09  Score=72.51  Aligned_cols=77  Identities=12%  Similarity=0.166  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-cchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-PSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...... ..+. .....+.  ...+.++.+|++|++.+.+.+..
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999987532100 0001 1111121  23577889999999999887644


Q ss_pred             h
Q 037506           81 S   81 (91)
Q Consensus        81 ~   81 (91)
                      .
T Consensus        84 ~   84 (273)
T PRK08278         84 A   84 (273)
T ss_pred             H
Confidence            3

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.1e-09  Score=72.71  Aligned_cols=63  Identities=17%  Similarity=0.222  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++++||||+|+||++++++|+++|++|++++|+..      ..+   .+...+++++.+|++|.+.+.+.+
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~------~~~---~~~~~~~~~~~~D~~~~~~v~~~~   63 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAA------ALA---ALQALGAEALALDVADPASVAGLA   63 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHH------HHH---HHHhccceEEEecCCCHHHHHHHH
Confidence            357999999999999999999999999999998742      221   122235678999999999888753

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.01  E-value=2.7e-09  Score=72.41  Aligned_cols=64  Identities=13%  Similarity=0.088  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....            ....+.++.+|++|++.+.+.+..
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG------------QHENYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCceEEEEccCCCHHHHHHHHHH
Confidence            4467899999999999999999999999999999875321            122578899999999998887543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.00  E-value=2.9e-09  Score=72.45  Aligned_cols=72  Identities=15%  Similarity=0.144  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..++|+||||+|+||++++++|+++| ++|++++|+.... .....+.+.......++++.+|+.|++.+.+.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~   79 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPR-RDAAVAQMKAAGASSVEVIDFDALDTDSHPKVI   79 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchh-HHHHHHHHHhcCCCceEEEEecCCChHHHHHHH
Confidence            45689999999999999999999995 9999999975320 000111111111225789999999998876654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.00  E-value=1.1e-09  Score=76.00  Aligned_cols=70  Identities=24%  Similarity=0.292  Sum_probs=54.9

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC---CCeEEEEeeCCChhhhhHHH
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG---IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~---~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+.+++++|||||+.||..+++.|.++||+|+++.|+.      ++.. ...++..   ..++++.+|++|++.+.+..
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~------~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~   75 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARRE------DKLEALAKELEDKTGVEVEVIPADLSDPEALERLE   75 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH------HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHH
Confidence            356778999999999999999999999999999999975      3322 2223332   24688999999998887753

>PLN00016 RNA-binding protein; Provisional

Probab=99.00  E-value=7.3e-10  Score=79.37  Aligned_cols=65  Identities=25%  Similarity=0.408  Sum_probs=46.1

Q ss_pred             CCCeEEEE----cCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-c-chHHHhhhhcCCCeEEEEeeCCC
Q 037506            6 TKPKKLIF----GGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-P-SKLEIHKEFQGIGVTIIENLCDV   70 (91)
Q Consensus         6 ~~~~ilIt----GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~-~~~~~~~~l~~~~v~~v~gDl~d   70 (91)
                      .+++|+||    |||||||++++++|+++||+|++++|....... + ........+...+++++.+|+.|
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d  121 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD  121 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH
Confidence            34789999    999999999999999999999999997532100 0 00001112223468899999877

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.00  E-value=2.7e-09  Score=72.56  Aligned_cols=72  Identities=13%  Similarity=-0.039  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||.+++++|+++|++|+++.|+...     .......+.  ...+.++++|++|++++.+++...
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQEL-----VDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQI   81 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999886421     111112222  225788999999999998876443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.99  E-value=2.9e-09  Score=71.40  Aligned_cols=74  Identities=11%  Similarity=0.079  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..++++||||+|+||++++++|+++|++|++..+....    ........+..  ..+.++.+|++|++.+.+.+....
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE----AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAV   79 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999876654211    11111122222  247889999999999988764433

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.99  E-value=2.2e-09  Score=72.72  Aligned_cols=68  Identities=13%  Similarity=0.134  Sum_probs=51.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++++||||+|+||+++++.|+++|++|++++|+....     ......+.  ...+.++.+|+.|++.+.+.+..
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL-----ASLAQELADHGGEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            5799999999999999999999999999999874211     11111121  23578899999999988887543

>PRK12743 oxidoreductase; Provisional

Probab=98.99  E-value=3.1e-09  Score=71.98  Aligned_cols=70  Identities=9%  Similarity=-0.018  Sum_probs=51.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +++++||||+|+||++++++|+++|++|.++.|...     +... ....+.  ...+.++.+|++|++.+++.+...
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE-----EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL   74 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCCh-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            458999999999999999999999999988876532     1111 112222  235788999999999988876443

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.99  E-value=2.7e-09  Score=71.32  Aligned_cols=71  Identities=10%  Similarity=0.079  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.++++||||+|+||+++++.|+++|++|+++.|+...    ........+.  ...+.++.+|++|++.+.+.+..
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAA----AADELVAEIEAAGGRAIAVQADVADAAAVTRLFDA   76 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            34689999999999999999999999999888775321    1111111221  23578899999999998887643

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.98  E-value=4.4e-09  Score=70.27  Aligned_cols=66  Identities=14%  Similarity=0.098  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++++||||+|+||+++++.|.++|++|++++|+.      ++...+..  ..+..++.+|++|.+.+.+.+
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~------~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~   72 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA------AALDRLAG--ETGCEPLRLDVGDDAAIRAAL   72 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHH--HhCCeEEEecCCCHHHHHHHH
Confidence            4557899999999999999999999999999999864      22221111  124678899999998887764

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.98  E-value=1.5e-09  Score=81.94  Aligned_cols=60  Identities=20%  Similarity=0.259  Sum_probs=44.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHH--hCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCCh
Q 037506            8 PKKLIFGGTGYLGKYMVKASV--SSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll--~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~   71 (91)
                      |+|+|||||||||++++++|+  +.+++|++++|+...    .....+ ......+++++.+|++|+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~----~~~~~~~~~~~~~~v~~~~~Dl~~~   63 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL----SRLEALAAYWGADRVVPLVGDLTEP   63 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH----HHHHHHHHhcCCCcEEEEecccCCc
Confidence            479999999999999999999  588999999996421    111111 111124689999999984

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.98  E-value=3.4e-09  Score=71.87  Aligned_cols=69  Identities=10%  Similarity=0.035  Sum_probs=52.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHHhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      |+++||||+|.||+.++++|+++|++|++++|+...     .......+.. ..+.++.+|++|++++++.+...
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~   70 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN-----LEKALKELKEYGEVYAVKADLSDKDDLKNLVKEA   70 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999986421     1111122221 25788999999999998876443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.98  E-value=1.8e-09  Score=75.89  Aligned_cols=62  Identities=19%  Similarity=0.291  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      ..++|+||||.||||+||++.|..+||+|++++...++.    +......+....++++..|+..+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~----k~n~~~~~~~~~fel~~hdv~~p   87 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR----KENLEHWIGHPNFELIRHDVVEP   87 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc----hhhcchhccCcceeEEEeechhH
Confidence            357999999999999999999999999999999765432    21222233455788888888765

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.97  E-value=3.8e-09  Score=71.42  Aligned_cols=71  Identities=15%  Similarity=0.021  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++|+||||+|+||++++++|.++|++|++++|+....     ......+.  ...+.++.+|++|.+++.+++..
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   81 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA-----NHVVDEIQQLGGQAFACRCDITSEQELSALADF   81 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            4468999999999999999999999999999998864211     11111121  22467889999999998886543

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.97  E-value=3.8e-09  Score=70.85  Aligned_cols=69  Identities=10%  Similarity=0.032  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +++|+||||+|+||+.+++.|+++|++|.++.++..     +... ....+.  ...+.++.+|++|++++.+.+..
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   73 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDA-----AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDA   73 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHH
Confidence            468999999999999999999999999887764321     1111 111121  23578999999999988876543

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.97  E-value=3.5e-09  Score=71.52  Aligned_cols=71  Identities=15%  Similarity=0.151  Sum_probs=53.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++..++++||||+|+||++++++|.++|++ |++++|+....     ......+.  ...+.++.+|++|++.+.+.+.
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG-----EAQAAELEALGAKAVFVQADLSDVEDCRRVVA   76 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH-----HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            456688999999999999999999999999 99999864211     11111221  2246778999999998888653

>TIGR02415 23BDH acetoin reductases

Probab=98.97  E-value=4e-09  Score=70.89  Aligned_cols=68  Identities=18%  Similarity=0.072  Sum_probs=51.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++++||||+|+||.+++++|++.|++|+++.|+...     .......+.  ...+.++.+|++|++.+.+.+..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~   70 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET-----AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQ   70 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            469999999999999999999999999999986421     111112222  23478899999999998887543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.97  E-value=2.8e-09  Score=71.70  Aligned_cols=68  Identities=15%  Similarity=0.082  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCC--ChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCD--VGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~--d~~~l~~~~   78 (91)
                      ..++++||||+|+||.+++++|++.|++|++++|+...     .......+.   ...+.++.+|++  +++.+.+.+
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~   83 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEK-----LEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA   83 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHH-----HHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence            45789999999999999999999999999999997421     111112222   234678888886  566666543

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.96  E-value=3.1e-09  Score=73.26  Aligned_cols=65  Identities=26%  Similarity=0.332  Sum_probs=48.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|||||||||++++++|+++|++|++++|.....  +..   ..... ..+++++.+|+.|++.+.+++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~   66 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGS--PEA---LKRGERITRVTFVEGDLRDRELLDRLF   66 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccc--hhh---hhhhccccceEEEECCCCCHHHHHHHH
Confidence            589999999999999999999999999887643221  111   11111 115778899999999888765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.96  E-value=6e-09  Score=73.06  Aligned_cols=81  Identities=16%  Similarity=0.097  Sum_probs=57.2

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC----CcchHH-HhhhhcC--CCeEEEEeeCCChhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS----RPSKLE-IHKEFQG--IGVTIIENLCDVGQV   73 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~----~~~~~~-~~~~l~~--~~v~~v~gDl~d~~~   73 (91)
                      |-+++..+.++||||++.||.+++++|++.|++|++++|+.....    ++++.. ....+..  ..+.++++|++|+++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            345567789999999999999999999999999999999743110    011111 1112221  246788999999999


Q ss_pred             hhHHHhhh
Q 037506           74 TSSQRMRS   81 (91)
Q Consensus        74 l~~~~~~~   81 (91)
                      +++.+...
T Consensus        82 v~~~~~~~   89 (305)
T PRK08303         82 VRALVERI   89 (305)
T ss_pred             HHHHHHHH
Confidence            99876443

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.96  E-value=7.1e-09  Score=70.71  Aligned_cols=77  Identities=5%  Similarity=-0.009  Sum_probs=56.1

Q ss_pred             CCCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |...+..+.++||||+  +-||.+++++|+++|++|++..|....   .+..+ ....+....+.++++|++|++++++.
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   77 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL---EKEVRELADTLEGQESLLLPCDVTSDEEITAC   77 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc---hHHHHHHHHHcCCCceEEEecCCCCHHHHHHH
Confidence            4455667899999997  899999999999999999998875321   12222 11222223578899999999999887


Q ss_pred             Hhh
Q 037506           78 RMR   80 (91)
Q Consensus        78 ~~~   80 (91)
                      +..
T Consensus        78 ~~~   80 (257)
T PRK08594         78 FET   80 (257)
T ss_pred             HHH
Confidence            643

>PRK05865 hypothetical protein; Provisional

Probab=98.96  E-value=2.9e-09  Score=83.52  Aligned_cols=59  Identities=19%  Similarity=0.217  Sum_probs=49.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++||+|++++|+...     .      . ..+++++.+|++|.+.+.+++
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~-----~------~-~~~v~~v~gDL~D~~~l~~al   59 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD-----S------W-PSSADFIAADIRDATAVESAM   59 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh-----h------c-ccCceEEEeeCCCHHHHHHHH
Confidence            579999999999999999999999999999986311     0      1 125789999999999888765

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=98.95  E-value=3.4e-09  Score=72.44  Aligned_cols=70  Identities=19%  Similarity=0.180  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++++|+.|++.+.+.+.
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   79 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK-----AEAVVAEIKAAGGEALAVKADVLDKESLEQARQ   79 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            445789999999999999999999999999999986421     111112222  2247889999999998887653

>PRK09242 tropinone reductase; Provisional

Probab=98.95  E-value=5.1e-09  Score=70.78  Aligned_cols=77  Identities=12%  Similarity=0.061  Sum_probs=55.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|.||+++++.|.++|++|++++|+...     .......+.    ...+.++.+|+.|++.+.+.+..
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADA-----LAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW   81 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999996421     111112221    23578889999999998887644


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus        82 ~~~~~g   87 (257)
T PRK09242         82 VEDHWD   87 (257)
T ss_pred             HHHHcC
Confidence            333343

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.95  E-value=2.7e-09  Score=72.95  Aligned_cols=68  Identities=9%  Similarity=0.029  Sum_probs=49.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++++||||+|+||.++++.|.++|++|+++.|+...     .......+.   .....++.+|+.|++.+.+....
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG-----LAQTVADARALGGTVPEHRALDISDYDAVAAFAAD   71 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence            479999999999999999999999999999886421     111112221   11245678999999988876544

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.95  E-value=3.7e-09  Score=70.60  Aligned_cols=66  Identities=12%  Similarity=0.083  Sum_probs=48.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +.++||||+|+||++++++|+++|++|+++. |+.      ++. +....+.  ...+.++++|+.|++.+.+.+.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~   71 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL------HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFT   71 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh------HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHH
Confidence            5799999999999999999999999998754 432      111 1112222  2247889999999999888653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.94  E-value=7.7e-09  Score=70.42  Aligned_cols=75  Identities=13%  Similarity=0.037  Sum_probs=56.0

Q ss_pred             CCCCCCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |-+++..+.++||||  ++.||.+++++|.++|++|++.+|+..    ++..+.+ ..+. ..+.++.+|++|++++++.
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~----~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~   75 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA----LRLTERIAKRLP-EPAPVLELDVTNEEHLASL   75 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc----hhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHH
Confidence            556677789999999  899999999999999999999987531    1111111 2222 2567899999999999887


Q ss_pred             Hhh
Q 037506           78 RMR   80 (91)
Q Consensus        78 ~~~   80 (91)
                      +..
T Consensus        76 ~~~   78 (256)
T PRK07889         76 ADR   78 (256)
T ss_pred             HHH
Confidence            533

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.94  E-value=3.6e-09  Score=79.95  Aligned_cols=79  Identities=16%  Similarity=0.089  Sum_probs=57.6

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +++..++++||||||+||.+++++|+++|++|++++|+...     .......+.  ...+.++.+|+.|.+.+.+.+..
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  441 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA-----LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD  441 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            34567889999999999999999999999999999997421     111112221  23578899999999999887644


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus       442 ~~~~~g  447 (657)
T PRK07201        442 ILAEHG  447 (657)
T ss_pred             HHHhcC
Confidence            333333

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.94  E-value=6.1e-09  Score=69.22  Aligned_cols=59  Identities=17%  Similarity=0.134  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..++++||||+|+||++++++|+++|++|+++.|+....           .   ..+++.+|++|++.+.+.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~---~~~~~~~D~~~~~~~~~~~   60 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----------F---PGELFACDLADIEQTAATL   60 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----------c---CceEEEeeCCCHHHHHHHH
Confidence            346899999999999999999999999999999974210           1   2367899999998887764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.94  E-value=7.7e-09  Score=72.27  Aligned_cols=75  Identities=9%  Similarity=0.056  Sum_probs=55.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |...+..++++||||+|+||++++++|+++|++|++.+|....    ........+.  ...+.++.+|++|++.+.+.+
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~----~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~   81 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASAL----DASDVLDEIRAAGAKAVAVAGDISQRATADELV   81 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchh----HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            3445667899999999999999999999999999998875321    1111112222  234778999999999888865


Q ss_pred             h
Q 037506           79 M   79 (91)
Q Consensus        79 ~   79 (91)
                      .
T Consensus        82 ~   82 (306)
T PRK07792         82 A   82 (306)
T ss_pred             H
Confidence            3

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.94  E-value=6.1e-09  Score=69.45  Aligned_cols=68  Identities=10%  Similarity=0.053  Sum_probs=51.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++++||||+|+||+++++.|.++|++|++++|+...    ..........  ...+.++.+|++|.+.+.+.+.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   72 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND----CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALA   72 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH----HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            589999999999999999999999999999987421    1111111111  2347899999999998888753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.93  E-value=9.7e-09  Score=68.82  Aligned_cols=70  Identities=14%  Similarity=0.199  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..+.++||||||+||++++++|+++|++|+++.+...    +...+....+.  ...+..+.+|+.|.+.+.+.+.
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS----PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFD   73 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            3467999999999999999999999999888654321    11122222222  2246677899999998888653

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.92  E-value=6.3e-09  Score=70.95  Aligned_cols=66  Identities=12%  Similarity=-0.033  Sum_probs=50.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++.+|+.|++.+.+.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   68 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG-----GEETLKLLREAGGDGFYQRCDVRDYSQLTALA   68 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            479999999999999999999999999999986421     111112222  235788999999999887764

>PRK05884 short chain dehydrogenase; Provisional

Probab=98.92  E-value=6.8e-09  Score=69.49  Aligned_cols=63  Identities=19%  Similarity=0.225  Sum_probs=49.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+++||||+|.||+++++.|.++|++|++++|+.      ++.....  ...+++++++|++|++.+++.+
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~------~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~   63 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR------DDLEVAA--KELDVDAIVCDNTDPASLEEAR   63 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHH--HhccCcEEecCCCCHHHHHHHH
Confidence            4799999999999999999999999999999863      2222111  1124678999999999888765

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.91  E-value=4.7e-09  Score=73.75  Aligned_cols=72  Identities=13%  Similarity=0.051  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH--HhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE--IHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++..||||-||+-|++|++.|++.||+|..+.|.++.. ++....  .........++++.+|++|...+.+.+.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~-n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~   75 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSF-NTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE   75 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccC-CcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence            46789999999999999999999999999999986544 232211  1122233458899999999999888753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.89  E-value=1e-08  Score=68.25  Aligned_cols=68  Identities=15%  Similarity=0.161  Sum_probs=50.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +.++||||+|+||++++++|+++|++|+++.|...    +..........  ...+.++.+|++|++.+.+.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   70 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE----ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVA   70 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHH
Confidence            46899999999999999999999999999988321    11111111111  2357899999999998887653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12742 oxidoreductase; Provisional

Probab=98.89  E-value=1.2e-08  Score=67.86  Aligned_cols=68  Identities=21%  Similarity=0.165  Sum_probs=50.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++|+||||+|+||++++++|.++|++|+++.|..     ++..+.+.  ...++.++.+|++|.+.+.+.+.
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~-----~~~~~~l~--~~~~~~~~~~D~~~~~~~~~~~~   71 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS-----KDAAERLA--QETGATAVQTDSADRDAVIDVVR   71 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC-----HHHHHHHH--HHhCCeEEecCCCCHHHHHHHHH
Confidence            4567899999999999999999999999998877642     12221111  11246788999999888877653

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.89  E-value=1.2e-08  Score=67.09  Aligned_cols=67  Identities=22%  Similarity=0.169  Sum_probs=50.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc-CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~-~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      |+++|||||||+|. +++.|.++||+|++++|+.      ++...+ ..+. ...+.++.+|+.|++++.+++...
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~------~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~   69 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARRE------VKLENVKRESTTPESITPLPLDYHDDDALKLAIKST   69 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCH------HHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            57999999998876 9999999999999999864      222211 1121 235788899999999999876443

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.89  E-value=1.1e-08  Score=68.45  Aligned_cols=68  Identities=9%  Similarity=-0.032  Sum_probs=49.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.++||||+|+||++++++|+++|+.|.+..+..     +++.. ....+.  ...+.++.+|++|.+++.+.+..
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   73 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRN-----RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEA   73 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCC-----HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHH
Confidence            4799999999999999999999999888776542     11111 112222  23467899999999988887543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=98.89  E-value=1.6e-08  Score=68.47  Aligned_cols=71  Identities=11%  Similarity=-0.020  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+.++||||+|.||.+++++|.+.|++|++++|...    .+..+.+... ...+.++++|++|.+++.+.+..
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~----~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   78 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP----TETIEQVTAL-GRRFLSLTADLRKIDGIPALLER   78 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch----HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999998876431    1111222221 23477889999999999887644

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.89  E-value=1.1e-08  Score=67.82  Aligned_cols=66  Identities=11%  Similarity=0.114  Sum_probs=49.0

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++|||++|+||++++++|+++|++|++++|+....    .......+..  ..+.++.+|++|++.+.+.+.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   68 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEG----AEEVVEELKAYGVKALGVVCDVSDREDVKAVVE   68 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhH----HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            58999999999999999999999999999864211    1111122221  247889999999998888653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05855 short chain dehydrogenase; Validated

Probab=98.89  E-value=8.5e-09  Score=76.18  Aligned_cols=71  Identities=7%  Similarity=-0.047  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|.++|++|++++|+...     .......+.  ..++.++.+|++|++.+.+.+..
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  385 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAA-----AERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW  385 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999996421     111112222  23578899999999998887543

>PRK06125 short chain dehydrogenase; Provisional

Probab=98.88  E-value=1e-08  Score=69.47  Aligned_cols=70  Identities=14%  Similarity=0.154  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|.+|.++++.|+++|++|++++|+....     ......+.   ...+.++.+|++|++.+.+.+.
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL-----EALAADLRAAHGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            4567999999999999999999999999999999874211     11111122   2357889999999999888653

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.87  E-value=2.4e-08  Score=69.37  Aligned_cols=71  Identities=8%  Similarity=0.017  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc-CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ-GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|.||.++++.|.++|++|++++|+.      ++.+ ....+. ...+..+.+|++|.+++.+.+.+.
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE------AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999864      2222 112222 123455679999999998876443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.87  E-value=4.6e-09  Score=73.34  Aligned_cols=63  Identities=14%  Similarity=0.338  Sum_probs=42.7

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHH-Hhhhh-------cCCCeEEEEeeCCCh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLE-IHKEF-------QGIGVTIIENLCDVG   71 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~-~~~~l-------~~~~v~~v~gDl~d~   71 (91)
                      +|+|||||||+|++++++|+++|  ++|++++|..+.....++.. .+...       ...+++++.+|++++
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   73 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEP   73 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcc
Confidence            58999999999999999999998  67999999753110000100 00000       003689999999764

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.87  E-value=1.2e-08  Score=71.37  Aligned_cols=79  Identities=14%  Similarity=0.144  Sum_probs=58.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhcCC-CeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQGI-GVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~~~-~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..+.++|||||..||.+++.+|.++|..+..+.|.....   ++. +.+...... .+.++++|++|.+++.+++....
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl---~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRL---ERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhH---HHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999988888865322   222 222222223 48999999999999999875544


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      +-+|
T Consensus        87 ~~fg   90 (282)
T KOG1205|consen   87 RHFG   90 (282)
T ss_pred             HhcC
Confidence            4454

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.87  E-value=4.2e-09  Score=71.69  Aligned_cols=58  Identities=17%  Similarity=0.295  Sum_probs=38.0

Q ss_pred             EEcCCchHHHHHHHHHHhCCC--cEEEEecCCCCCCCcchHHHh-hh---------h---cCCCeEEEEeeCCChh
Q 037506           12 IFGGTGYLGKYMVKASVSSGH--NTFVYARPVTQNSRPSKLEIH-KE---------F---QGIGVTIIENLCDVGQ   72 (91)
Q Consensus        12 ItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~-~~---------l---~~~~v~~v~gDl~d~~   72 (91)
                      |||||||+|++|+++|++++.  +|++++|..+..   +..+.+ ..         .   ...+++++.||++++.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~---~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~   73 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ---SALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPN   73 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH---HHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc---cchhhhhhhcccccchhhhhhhhhccEEEEeccccccc
Confidence            799999999999999999886  899999976321   111111 11         1   1458999999999854

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.86  E-value=2.3e-08  Score=69.26  Aligned_cols=83  Identities=13%  Similarity=0.033  Sum_probs=56.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS---RPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      .+..+.++||||++.||..++++|+++|++|++++|+.....   ..+.. .....+.  ...+.++.+|++|++++.+.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            456688999999999999999999999999999887541000   01111 1122222  22467889999999998887


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +......+|
T Consensus        83 ~~~~~~~~g   91 (286)
T PRK07791         83 VDAAVETFG   91 (286)
T ss_pred             HHHHHHhcC
Confidence            644333334

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.85  E-value=1.2e-08  Score=68.12  Aligned_cols=66  Identities=11%  Similarity=0.084  Sum_probs=49.2

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+||||+|+||.+++++|.++|++|.+++|....    ........+.  ...+.++.+|++|.+.+.+.+.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   68 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRS----DAESVVSAIQAQGGNARLLQFDVADRVACRTLLE   68 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHH
Confidence            5899999999999999999999999998875321    1111112222  2357899999999999888653

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.85  E-value=1.8e-08  Score=67.36  Aligned_cols=69  Identities=16%  Similarity=0.043  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++++||||+|+||+++++.|+++|++|++++|+....     ......+.  ...+.++++|++|++.+.+.+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKL-----EEAVAECGALGTEVRGYAANVTDEEDVEATF   73 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4567899999999999999999999999999999864211     11111121  235788999999998887754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.85  E-value=2.3e-08  Score=73.12  Aligned_cols=68  Identities=10%  Similarity=0.072  Sum_probs=50.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+++++||||+|+||++++++|.++|++|++++|+...     ....... ....+..+.+|++|++.+.+.+
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~-----l~~~~~~-~~~~v~~v~~Dvsd~~~v~~~l  243 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDK-----ITLEING-EDLPVKTLHWQVGQEAALAELL  243 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHhh-cCCCeEEEEeeCCCHHHHHHHh
Confidence            346789999999999999999999999999999986421     1111111 1224678899999998887754

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.85  E-value=2.2e-08  Score=67.70  Aligned_cols=82  Identities=13%  Similarity=0.142  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCC------CCcchHHHhhhhc--CCCeEEEEeeCCChhhh
Q 037506            5 NTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQN------SRPSKLEIHKEFQ--GIGVTIIENLCDVGQVT   74 (91)
Q Consensus         5 ~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~------~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l   74 (91)
                      +..++|+||||||  .||.+++++|.++|++|++++|++...      ..++.......+.  ...+.++.+|++|.+++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            3457899999996  699999999999999999999873210      0001111111121  23578999999999998


Q ss_pred             hHHHhhhhhhhh
Q 037506           75 SSQRMRSGRSLG   86 (91)
Q Consensus        75 ~~~~~~~~~~~~   86 (91)
                      ..++......+|
T Consensus        83 ~~~~~~~~~~~g   94 (256)
T PRK12748         83 NRVFYAVSERLG   94 (256)
T ss_pred             HHHHHHHHHhCC
Confidence            887655444333

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.6e-08  Score=69.04  Aligned_cols=67  Identities=19%  Similarity=0.132  Sum_probs=49.8

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+..++++||||+|+||++++++|+++|++|++++|+...     ....  ... ....++.+|++|.+.+.+.+
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~-----~~~~--~~~-~~~~~~~~D~~~~~~~~~~~   77 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN-----NSES--NDE-SPNEWIKWECGKEESLDKQL   77 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh-----hhhh--hcc-CCCeEEEeeCCCHHHHHHhc
Confidence            4556789999999999999999999999999999986411     1111  111 12367889999998877643

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.5e-08  Score=68.69  Aligned_cols=71  Identities=10%  Similarity=-0.020  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCc-hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTG-YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG-~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+| .||+++++.|+++|++|++.+|+....     ......+    ....+.++++|++|++.+.+.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   89 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL-----GETADELAAELGLGRVEAVVCDVTSEAQVDALID   89 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence            4467899999997 599999999999999999988864211     1111112    11357889999999998888653


Q ss_pred             h
Q 037506           80 R   80 (91)
Q Consensus        80 ~   80 (91)
                      .
T Consensus        90 ~   90 (262)
T PRK07831         90 A   90 (262)
T ss_pred             H
Confidence            3

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.84  E-value=1.4e-08  Score=69.21  Aligned_cols=65  Identities=11%  Similarity=0.100  Sum_probs=46.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +.++||||+|+||++++++|+++|++|+++.|+..     +... ....+.   ...+.++.+|++|.+.+.++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~   70 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSA-----AAASTLAAELNARRPNSAVTCQADLSNSATLFSR   70 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcH-----HHHHHHHHHHHhccCCceEEEEccCCCchhhHHH
Confidence            46899999999999999999999999999876531     1111 112221   22456789999998866443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.84  E-value=1.4e-08  Score=73.23  Aligned_cols=71  Identities=25%  Similarity=0.264  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+.+++||||+||+|+|++++|++.+  .+|++++..+...  +...+. ..+....++++.+|++|...+..++-
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~--~~~~e~-~~~~~~~v~~~~~D~~~~~~i~~a~~   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS--NLPAEL-TGFRSGRVTVILGDLLDANSISNAFQ   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc--ccchhh-hcccCCceeEEecchhhhhhhhhhcc
Confidence            45689999999999999999999988  8999999876422  111111 11124578999999999999988863

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.82  E-value=2.1e-08  Score=67.15  Aligned_cols=68  Identities=15%  Similarity=0.052  Sum_probs=47.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCC--hhhhhHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDV--GQVTSSQ   77 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d--~~~l~~~   77 (91)
                      +..++++||||+|+||.++++.|+++|++|++++|+....     ......+   ....+.++.+|+.|  .+.+.+.
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL-----EKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQF   76 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH-----HHHHHHHHHcCCCCcceEEeeecccchHHHHHH
Confidence            4557899999999999999999999999999999975211     1111112   12245678899875  3344443

>PRK06484 short chain dehydrogenase; Validated

Probab=98.82  E-value=3.1e-08  Score=73.17  Aligned_cols=75  Identities=13%  Similarity=0.091  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      ..+.++||||+|.||.+++++|.++|++|++++|+..      +.+.+.......+..+.+|++|++.+.+.+......+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAE------GAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999998642      2222121112346778999999999988764433333


Q ss_pred             h
Q 037506           86 G   86 (91)
Q Consensus        86 ~   86 (91)
                      |
T Consensus       342 g  342 (520)
T PRK06484        342 G  342 (520)
T ss_pred             C
Confidence            3

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.82  E-value=2.5e-08  Score=67.18  Aligned_cols=77  Identities=8%  Similarity=-0.069  Sum_probs=56.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..+.++||||++-||..++++|.++|++|.++.|+....     .+....+.  ...+..+.+|+.|++++.+.+....
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l-----~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL-----KDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIE   77 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH-----HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHH
Confidence            4557899999999999999999999999999999864221     11111121  2246778899999999988765544


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        78 ~~~g   81 (227)
T PRK08862         78 QQFN   81 (227)
T ss_pred             HHhC
Confidence            4455

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.82  E-value=1.5e-08  Score=77.90  Aligned_cols=76  Identities=9%  Similarity=0.092  Sum_probs=55.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....     ......+    ....+.++++|++|++++.+.+..
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~-----~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA-----EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH-----HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999864211     1111111    112467889999999999887654


Q ss_pred             hhhhh
Q 037506           81 SGRSL   85 (91)
Q Consensus        81 ~~~~~   85 (91)
                      ....+
T Consensus       487 i~~~~  491 (676)
T TIGR02632       487 VALAY  491 (676)
T ss_pred             HHHhc
Confidence            43333

>PRK07069 short chain dehydrogenase; Validated

Probab=98.82  E-value=1.8e-08  Score=67.47  Aligned_cols=67  Identities=13%  Similarity=0.121  Sum_probs=48.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC----CCeEEEEeeCCChhhhhHHHhh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG----IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~----~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +++||||+|+||.++++.|+++|++|++++|+..     ++.+ ....+..    ..+.++++|+.|++.+.+.+..
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDA-----AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ   72 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcc-----hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence            4899999999999999999999999999998731     1111 1111211    1234678999999998886543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.82  E-value=3.5e-08  Score=67.71  Aligned_cols=80  Identities=10%  Similarity=-0.021  Sum_probs=56.0

Q ss_pred             CCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +++..+.++||||++  -||+++++.|+++|++|++..|+.. .  .+..+.+.. ......++.+|++|++++++.+..
T Consensus         2 ~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~   77 (262)
T PRK07984          2 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L--KGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAE   77 (262)
T ss_pred             cccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-H--HHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHH
Confidence            346678899999985  8999999999999999998887521 0  111111111 112456789999999999998655


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .....|
T Consensus        78 ~~~~~g   83 (262)
T PRK07984         78 LGKVWP   83 (262)
T ss_pred             HHhhcC
Confidence            444444

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.80  E-value=4.5e-08  Score=66.79  Aligned_cols=79  Identities=13%  Similarity=-0.037  Sum_probs=55.5

Q ss_pred             CCCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHH
Q 037506            2 EGKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         2 ~~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~   77 (91)
                      .|+++.+.++||||++  .||.+++++|.++|++|++..|+..      ..+....+..  ....++++|++|++++.+.
T Consensus         3 ~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~------~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~   76 (260)
T PRK06603          3 TGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV------LEKRVKPLAEEIGCNFVSELDVTNPKSISNL   76 (260)
T ss_pred             CcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH------HHHHHHHHHHhcCCceEEEccCCCHHHHHHH
Confidence            3557778899999997  7999999999999999998887521      1111222211  1234578999999999987


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +......+|
T Consensus        77 ~~~~~~~~g   85 (260)
T PRK06603         77 FDDIKEKWG   85 (260)
T ss_pred             HHHHHHHcC
Confidence            654444444

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.1e-08  Score=66.58  Aligned_cols=64  Identities=14%  Similarity=0.151  Sum_probs=49.1

Q ss_pred             EEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHh
Q 037506           11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        11 lItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +||||+|+||++++++|+++|++|++++|+...     .......+. ..+++++.+|++|++.+.+.+.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   65 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDR-----LAAAARALGGGAPVRTAALDITDEAAVDAFFA   65 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            599999999999999999999999999997421     111112221 2367899999999999988764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.78  E-value=1.4e-08  Score=69.57  Aligned_cols=33  Identities=24%  Similarity=0.395  Sum_probs=31.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|||||||||++++++|+++||+|++++|..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~   33 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ   33 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc
Confidence            589999999999999999999999999999863

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK05599 hypothetical protein; Provisional

Probab=98.78  E-value=2.8e-08  Score=67.22  Aligned_cols=67  Identities=13%  Similarity=0.143  Sum_probs=49.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC---CCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG---IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~---~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |.++||||++.||..++++|. +|++|+++.|+....     ......+..   ..+.++.+|+.|++++++.+..
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~   70 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAA-----QGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ   70 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHH-----HHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence            569999999999999999998 599999999864211     111122221   2367899999999999887544

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.77  E-value=3.3e-09  Score=73.98  Aligned_cols=34  Identities=29%  Similarity=0.515  Sum_probs=31.9

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      |+|||||||||++|+.+|.+.||+|++++|++..
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~   34 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPK   34 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcc
Confidence            6899999999999999999999999999998754

>PLN02778 3,5-epimerase/4-reductase

Probab=98.77  E-value=1.5e-08  Score=70.79  Aligned_cols=33  Identities=27%  Similarity=0.381  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      .|+||||||+||||++|+++|+++|++|+...+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~   41 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG   41 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC
Confidence            478999999999999999999999999986543

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.76  E-value=4.4e-08  Score=66.01  Aligned_cols=69  Identities=14%  Similarity=0.039  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..+.++||||+|+||++++++|.+.|++|.+..+...    .........+.  ...+..+.+|+.|.+.+...+
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK----EEAEETVYEIQSNGGSAFSIGANLESLHGVEALY   73 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCH----HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHH
Confidence            4578999999999999999999999999988754321    11111112222  224677889999988877654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.76  E-value=4e-08  Score=68.92  Aligned_cols=69  Identities=20%  Similarity=0.195  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++.++||||++.||.+++++|+++| ++|++++|+...     ..+....+.  ...+.++.+|++|.+++++.+..
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   74 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK-----AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQ   74 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH-----HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHH
Confidence            4689999999999999999999999 999999986421     111112222  23467889999999999887543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06484 short chain dehydrogenase; Validated

Probab=98.75  E-value=7.5e-08  Score=71.17  Aligned_cols=70  Identities=14%  Similarity=0.117  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ...+.++||||++.||..++++|.++|++|+++.|+...     .......+ ...+.++.+|++|++++.+.+..
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   72 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER-----ARERADSL-GPDHHALAMDVSDEAQIREGFEQ   72 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHh-CCceeEEEeccCCHHHHHHHHHH
Confidence            356789999999999999999999999999999986421     11111222 23567899999999998887644

>PRK08324 short chain dehydrogenase; Validated

Probab=98.75  E-value=6.8e-08  Score=74.20  Aligned_cols=70  Identities=14%  Similarity=0.069  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcC-CCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQG-IGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..++++||||+|+||+++++.|.++|++|++++|+..      .... ...+.. ..+.++.+|++|++.+.+.+...
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~------~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~  492 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEE------AAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEA  492 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHH------HHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999742      2111 111211 26789999999999988876443

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.75  E-value=4.4e-08  Score=65.31  Aligned_cols=59  Identities=24%  Similarity=0.160  Sum_probs=44.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |+++||||+|+||++++++|++++  +.|....|+...           ......+.++++|++|++.+++.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~Dls~~~~~~~~   61 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP-----------DFQHDNVQWHALDVTDEAEIKQL   61 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc-----------ccccCceEEEEecCCCHHHHHHH
Confidence            589999999999999999999986  455555554311           11234678899999999887774

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.75  E-value=1e-07  Score=64.63  Aligned_cols=84  Identities=13%  Similarity=0.181  Sum_probs=55.2

Q ss_pred             CCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCC-----CCcchH-HHhhhhc--CCCeEEEEeeCCChh
Q 037506            3 GKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQN-----SRPSKL-EIHKEFQ--GIGVTIIENLCDVGQ   72 (91)
Q Consensus         3 ~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~-----~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~   72 (91)
                      ++...++++||||+|  .||.+++++|+++|++|+++.|.....     ...+.. .....+.  ...+.++.+|++|.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            356678999999995  799999999999999998875431100     001111 1111222  124678899999999


Q ss_pred             hhhHHHhhhhhhhh
Q 037506           73 VTSSQRMRSGRSLG   86 (91)
Q Consensus        73 ~l~~~~~~~~~~~~   86 (91)
                      ++.+.+......+|
T Consensus        82 ~i~~~~~~~~~~~g   95 (256)
T PRK12859         82 APKELLNKVTEQLG   95 (256)
T ss_pred             HHHHHHHHHHHHcC
Confidence            99887644444444

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.74  E-value=5.8e-08  Score=74.02  Aligned_cols=38  Identities=18%  Similarity=0.402  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEecCCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTQ   43 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~   43 (91)
                      ..++|+|||||||+|++|++.|++.+.   +|++++|....
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~  158 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDK  158 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCc
Confidence            457999999999999999999998764   67999997543

>PRK06720 hypothetical protein; Provisional

Probab=98.73  E-value=1.2e-07  Score=61.85  Aligned_cols=69  Identities=10%  Similarity=-0.008  Sum_probs=51.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..+.++||||++.||..+++.|.+.|++|.+++|+...     .......+.  .....++.+|++|.+.+.+.+
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v   84 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES-----GQATVEEITNLGGEALFVSYDMEKQGDWQRVI   84 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            345789999999999999999999999999999986421     111112221  224667899999998888764

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.72  E-value=1.6e-08  Score=69.01  Aligned_cols=34  Identities=29%  Similarity=0.602  Sum_probs=31.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      |+|||||||||+++++.|+++|++|++++|+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   34 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA   34 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence            6899999999999999999999999999997643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.71  E-value=1e-07  Score=64.85  Aligned_cols=78  Identities=12%  Similarity=-0.042  Sum_probs=54.2

Q ss_pred             CCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            4 KNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         4 ~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++..+.++||||+  +.||..++++|+++|++|.+.+|+....   +....+ ..+  ....++.+|++|++++.+.+..
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~---~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR---PYVEPLAEEL--DAPIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH---HHHHHHHHhh--ccceEEecCcCCHHHHHHHHHH
Confidence            3556789999998  4899999999999999999998864210   111111 112  1346789999999999887644


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .....|
T Consensus        82 ~~~~~g   87 (258)
T PRK07533         82 IAEEWG   87 (258)
T ss_pred             HHHHcC
Confidence            333333

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.71  E-value=7.8e-08  Score=60.87  Aligned_cols=70  Identities=19%  Similarity=0.231  Sum_probs=50.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |.++||||++-||..++++|+++| +.|.++.|+...   +........+.  ...+.++++|+++++.+++.+..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~---~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDS---EGAQELIQELKAPGAKITFIECDLSDPESIRALIEE   73 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHH---HHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccc---cccccccccccccccccccccccccccccccccccc
Confidence            468999999999999999999995 677788886100   11112222232  24679999999999999987643

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.71  E-value=6.7e-08  Score=64.32  Aligned_cols=54  Identities=11%  Similarity=0.114  Sum_probs=43.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      ..++++||||+|+||++++++|.++|++|++++|+....           . ...+.++.+|+.|+
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~-~~~~~~~~~D~~~~   57 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------L-SGNFHFLQLDLSDD   57 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------c-CCcEEEEECChHHH
Confidence            457899999999999999999999999999999864211           0 12467788888876

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.70  E-value=1.3e-07  Score=64.62  Aligned_cols=77  Identities=10%  Similarity=-0.038  Sum_probs=53.7

Q ss_pred             CCCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++..+.++||||  ++.||.+++++|+++|++|++..|...   ..+.   ..++..  .....+++|++|++.+.+.+.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK---LEER---VRKMAAELDSELVFRCDVASDDEINQVFA   76 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH---HHHH---HHHHHhccCCceEEECCCCCHHHHHHHHH
Confidence            356678999997  679999999999999999998876421   0111   122211  134578999999999998764


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      ..-...|
T Consensus        77 ~~~~~~g   83 (261)
T PRK08690         77 DLGKHWD   83 (261)
T ss_pred             HHHHHhC
Confidence            4333333

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.70  E-value=1.6e-07  Score=64.55  Aligned_cols=67  Identities=16%  Similarity=0.131  Sum_probs=52.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .|-++|||||+.||.++++.|.++|++|++..|+.      ++.+. ..++....+.++..|++|.+++.+++.
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~------drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~   73 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARRE------ERLEALADEIGAGAALALALDVTDRAAVEAAIE   73 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccH------HHHHHHHHhhccCceEEEeeccCCHHHHHHHHH
Confidence            46789999999999999999999999999999974      33322 223332357889999999999877654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.70  E-value=6.1e-08  Score=65.72  Aligned_cols=67  Identities=13%  Similarity=0.094  Sum_probs=49.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHh----CCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHhh
Q 037506            9 KKLIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++||||++.||.+++++|.+    .|++|+++.|+....     ......+.    ...+.++.+|++|++.+++.+..
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   76 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL-----RQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA   76 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH-----HHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence            589999999999999999997    799999999974221     11112222    22478899999999988886533

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.70  E-value=1.5e-07  Score=64.18  Aligned_cols=79  Identities=10%  Similarity=-0.035  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+.++||||+  +-||..++++|.++|++|++..|+....   ...+....+..  ..+.++.+|++|++++.+.+..
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG---RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc---hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence            455789999986  7999999999999999998887653211   01111222221  2356889999999999887644


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-..+|
T Consensus        81 ~~~~~g   86 (258)
T PRK07370         81 IKQKWG   86 (258)
T ss_pred             HHHHcC
Confidence            333333

>PLN02996 fatty acyl-CoA reductase

Probab=98.69  E-value=9.9e-08  Score=71.07  Aligned_cols=38  Identities=21%  Similarity=0.392  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTQ   43 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~   43 (91)
                      ..++|+|||||||+|+++++.|++.+   .+|+++.|....
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~   50 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDA   50 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCC
Confidence            45789999999999999999999865   368999997653

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.69  E-value=2.6e-07  Score=57.95  Aligned_cols=69  Identities=22%  Similarity=0.277  Sum_probs=48.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++++|+||+|+||.+++++|.++|+ .|+++.|+....  ......+..+.  ...+.++.+|+++++.+.+.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA--PGAAELLAELEALGAEVTVVACDVADRAALAAAL   72 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC--ccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            4689999999999999999999986 677788864322  11111112222  235678899999988887764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.68  E-value=1.1e-07  Score=65.49  Aligned_cols=74  Identities=12%  Similarity=-0.014  Sum_probs=53.4

Q ss_pred             CCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            2 EGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         2 ~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++++..+.++||||+  +.||..++++|.++|++|++..|+...   .++.+.+ ..+  ....++++|++|++++++.+
T Consensus         5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~---~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~   79 (272)
T PRK08159          5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL---KKRVEPLAAEL--GAFVAGHCDVTDEASIDAVF   79 (272)
T ss_pred             cccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH---HHHHHHHHHhc--CCceEEecCCCCHHHHHHHH
Confidence            466777899999997  789999999999999999888775210   1111111 111  13567899999999998875


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        80 ~~   81 (272)
T PRK08159         80 ET   81 (272)
T ss_pred             HH
Confidence            43

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.68  E-value=1.2e-07  Score=65.50  Aligned_cols=76  Identities=17%  Similarity=0.073  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..+.++||||+  +.||..+++.|.++|++|++..|+...   .+....+ ..+. .. .++.+|++|++++.+.+....
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~---~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL---KKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH---HHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHH
Confidence            45789999997  789999999999999999998886310   1111111 1122 12 578999999999988764443


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        79 ~~~g   82 (274)
T PRK08415         79 KDLG   82 (274)
T ss_pred             HHcC
Confidence            3344

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.66  E-value=6.6e-08  Score=68.28  Aligned_cols=58  Identities=21%  Similarity=0.123  Sum_probs=43.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc----CCCeEEEEeeCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ----GIGVTIIENLCDV   70 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~----~~~v~~v~gDl~d   70 (91)
                      .+.++|||||+.||.+++++|.++|++|++++|+..      +.+. ..++.    ...+..+.+|+++
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~------~l~~~~~~l~~~~~~~~~~~~~~Dl~~  115 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPD------KLKDVSDSIQSKYSKTQIKTVVVDFSG  115 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHH------HHHHHHHHHHHHCCCcEEEEEEEECCC
Confidence            578999999999999999999999999999999742      2211 12221    1246778899985

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.65  E-value=7.1e-08  Score=66.63  Aligned_cols=32  Identities=28%  Similarity=0.508  Sum_probs=28.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      |+|||||||||+++++.|.++|+ +|.+++|..
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~   33 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR   33 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence            68999999999999999999997 788887654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.64  E-value=5.1e-08  Score=67.59  Aligned_cols=32  Identities=25%  Similarity=0.525  Sum_probs=28.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|||||||||++|+++|++.|++++++.|+.
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~   33 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNL   33 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCC
Confidence            89999999999999999999999877776653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.62  E-value=1.9e-07  Score=63.75  Aligned_cols=79  Identities=13%  Similarity=0.005  Sum_probs=54.0

Q ss_pred             CCCCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            3 GKNTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         3 ~~~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +++..+.++||||  ++-||.+++++|+++|++|++..|....   .++...+ ..+  ....++.+|++|++++.+.+.
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~   76 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF---KDRITEFAAEF--GSDLVFPCDVASDEQIDALFA   76 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH---HHHHHHHHHhc--CCcceeeccCCCHHHHHHHHH
Confidence            4466788999996  6799999999999999999988764211   1222111 111  123468899999999998764


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      ......|
T Consensus        77 ~~~~~~g   83 (260)
T PRK06997         77 SLGQHWD   83 (260)
T ss_pred             HHHHHhC
Confidence            4433334

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.61  E-value=5.4e-07  Score=60.48  Aligned_cols=79  Identities=13%  Similarity=0.112  Sum_probs=55.4

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC----CCeEEEEeeCCC-hhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG----IGVTIIENLCDV-GQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~----~~v~~v~gDl~d-~~~l~~~~   78 (91)
                      .+.++.++||||++.||..+++.|.++|+.|++..|.....    ..+.......    ..+.+...|+++ .+.++..+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~   77 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE----AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALV   77 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh----hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHH
Confidence            35678899999999999999999999999999888864310    1111111112    256778899998 88888776


Q ss_pred             hhhhhhhh
Q 037506           79 MRSGRSLG   86 (91)
Q Consensus        79 ~~~~~~~~   86 (91)
                      ...-...|
T Consensus        78 ~~~~~~~g   85 (251)
T COG1028          78 AAAEEEFG   85 (251)
T ss_pred             HHHHHHcC
Confidence            44433333

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.61  E-value=9.8e-08  Score=69.00  Aligned_cols=62  Identities=16%  Similarity=0.309  Sum_probs=44.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHh---------hhhcCCCeEEEEeeCCCh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIH---------KEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~---------~~l~~~~v~~v~gDl~d~   71 (91)
                      +++|+||||||+|.+++..|+.+- .+|++++|..+..  ....+..         .+....+++++.||+..+
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E--~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~   72 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDE--AALARLEKTFDLYRHWDELSADRVEVVAGDLAEP   72 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHH--HHHHHHHHHhhhhhhhhhhhcceEEEEecccccc
Confidence            479999999999999999999865 4999999976411  0111111         123345789999999843

>PRK06940 short chain dehydrogenase; Provisional

Probab=98.61  E-value=2.8e-07  Score=63.39  Aligned_cols=66  Identities=12%  Similarity=0.144  Sum_probs=47.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++.++|||+ |+||++++++|. +|++|++++|+...     .......+..  ..+.++.+|++|++.+.+.+.
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~   69 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN-----LEAAAKTLREAGFDVSTQEVDVSSRESVKALAA   69 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHH
Confidence            356889998 689999999995 89999999986421     1111122222  247789999999999988753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.60  E-value=4.1e-07  Score=66.45  Aligned_cols=68  Identities=12%  Similarity=0.120  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..++++||||+|.||..+++.|.++|++|++++|...    .+......  ...+..++.+|++|++.+.+.+.
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~----~~~l~~~~--~~~~~~~~~~Dv~~~~~~~~~~~  276 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA----GEALAAVA--NRVGGTALALDITAPDAPARIAE  276 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc----HHHHHHHH--HHcCCeEEEEeCCCHHHHHHHHH
Confidence            3478999999999999999999999999999988532    11111111  11245788999999998887653

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.60  E-value=1.5e-07  Score=66.82  Aligned_cols=75  Identities=13%  Similarity=0.075  Sum_probs=55.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+.++||||+..||...++.|..+|.+|+...|+.... ...+...........+.++++|+.|..+++++...
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~-~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERG-EEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            3456899999999999999999999999999999985321 00111111123344678899999999999997543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.58  E-value=2.6e-07  Score=64.41  Aligned_cols=69  Identities=17%  Similarity=0.116  Sum_probs=52.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      -.||||-||.=|++|++.|+..||+|..+.|.++.. +..+.+++-.-    .....++.++|++|...+.+.+
T Consensus        30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsF-NT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I  102 (376)
T KOG1372|consen   30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSF-NTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI  102 (376)
T ss_pred             EEEEecccCCCchHHHHHHHhCCceeeEEEeecccc-chhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence            458999999999999999999999999999987765 33333332111    1124688999999999888754

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.57  E-value=4.7e-07  Score=59.15  Aligned_cols=71  Identities=15%  Similarity=0.196  Sum_probs=50.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhhh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .++||||+|.+|..+++.|.+++ .+++++.|.....  ++....+..+..  ..+.++.+|++|++.+.+.+...
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~--~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~   75 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS--AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL   75 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS--TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc--HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence            48999999999999999999998 4788888873221  233334444443  34788899999999999986543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.55  E-value=3.3e-07  Score=63.86  Aligned_cols=34  Identities=26%  Similarity=0.440  Sum_probs=31.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||||||++||+|++|.++|.++|++|+.+.|..
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~   34 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRSD   34 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh
Confidence            6899999999999999999999999999998764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.53  E-value=1.8e-07  Score=65.94  Aligned_cols=65  Identities=15%  Similarity=0.205  Sum_probs=45.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhh----cCCCeE----EEEeeCCChhhhhHHHh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEF----QGIGVT----IIENLCDVGQVTSSQRM   79 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~----~v~gDl~d~~~l~~~~~   79 (91)
                      ||||||+|.||+.|+++|++.+ .++++++|+...     ......++    ...+++    ++.+|++|.+.+...+.
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~-----l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~   74 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENK-----LYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFE   74 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHH-----HHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhH-----HHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHh
Confidence            7999999999999999999988 689999997421     11111223    223443    45899999999998764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.51  E-value=5.9e-07  Score=65.46  Aligned_cols=67  Identities=16%  Similarity=0.111  Sum_probs=54.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +|+|+|+|+ |+||+.++..|.+++ ++|++.+|+.      ++...+......+++..+.|+.|.+.+.+.+.+
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~------~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~   68 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSK------EKCARIAELIGGKVEALQVDAADVDALVALIKD   68 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCH------HHHHHHHhhccccceeEEecccChHHHHHHHhc
Confidence            578999999 999999999999998 9999999974      344444333334789999999999998887654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.50  E-value=1.3e-07  Score=65.12  Aligned_cols=30  Identities=20%  Similarity=0.389  Sum_probs=26.6

Q ss_pred             EEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506           11 LIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus        11 lItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ||||||||||++|+++|++.|++|+++.+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~   30 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH   30 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc
Confidence            699999999999999999999988776543

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.50  E-value=5.3e-07  Score=58.95  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=30.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+++||||+|.||.+++++|.++ ++|++++|+.
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~   33 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSS   33 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence            47999999999999999999999 9999999863

>PLN00015 protochlorophyllide reductase

Probab=98.49  E-value=3.3e-07  Score=64.07  Aligned_cols=64  Identities=16%  Similarity=0.048  Sum_probs=48.0

Q ss_pred             EEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506           11 LIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        11 lItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +||||++.||.+++++|+++| ++|++..|+...     .......+.  ...+.++.+|+.|.+++++.+.
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~   67 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLK-----AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVD   67 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHH-----HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHH
Confidence            599999999999999999999 999999886421     111112222  2247788999999999988753

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.42  E-value=7e-07  Score=67.44  Aligned_cols=71  Identities=11%  Similarity=0.103  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhh-hhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~-~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..|+|+||||+|-||+.+|+++++.+ -++++++|+..+.  ..-...+. .++...+.++-||+.|.+.+.+++
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~--~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~  321 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKL--YLIDMELREKFPELKLRFYIGDVRDRDRVERAM  321 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHH--HHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence            46799999999999999999999987 6788888875432  11111111 112356889999999999999975

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.41  E-value=1.3e-06  Score=59.12  Aligned_cols=68  Identities=18%  Similarity=0.145  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+....||||||+..||..++++|++.|.+|++..|+.      ++...... ..+.+.-..+|+.|.++.++.+
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e------~~L~e~~~-~~p~~~t~v~Dv~d~~~~~~lv   69 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNE------ERLAEAKA-ENPEIHTEVCDVADRDSRRELV   69 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH------HHHHHHHh-cCcchheeeecccchhhHHHHH
Confidence            34556899999999999999999999999999999974      22222221 2346777889999998877753

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.38  E-value=1.6e-06  Score=60.09  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=32.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      |+|+|+||||. |+.+++.|.+.||+|++.++...+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~   35 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG   35 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc
Confidence            58999999999 999999999999999999987643

This enzyme was found to be a monomer by gel filtration.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.36  E-value=2.9e-06  Score=58.04  Aligned_cols=78  Identities=17%  Similarity=0.137  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchH-HHh--hhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKL-EIH--KEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~-~~~--~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+++.|+||||...||..|+++|++. +-++++..+..     |+++ ..+  .....+++++++.|++..+++..+..+
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~-----~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~   75 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARD-----PEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQE   75 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCC-----hHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHH
Confidence            56677999999999999999999974 45555555431     2332 111  122356899999999999999998766


Q ss_pred             hhhhhhc
Q 037506           81 SGRSLGH   87 (91)
Q Consensus        81 ~~~~~~~   87 (91)
                      =....|.
T Consensus        76 V~~iVg~   82 (249)
T KOG1611|consen   76 VEKIVGS   82 (249)
T ss_pred             HHhhccc
Confidence            4444443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.31  E-value=3.1e-06  Score=57.92  Aligned_cols=68  Identities=18%  Similarity=0.163  Sum_probs=54.0

Q ss_pred             CCCCCCCCeEEEEcC-CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGG-TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~   77 (91)
                      ||-....+.|+|||+ +|.||-+|++.+.+.|+.|.+..|..++-         ..+. +.+++..+.|+++++.+...
T Consensus         1 ~e~~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M---------~~L~~~~gl~~~kLDV~~~~~V~~v   70 (289)
T KOG1209|consen    1 SELQSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPM---------AQLAIQFGLKPYKLDVSKPEEVVTV   70 (289)
T ss_pred             CCcccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchH---------hhHHHhhCCeeEEeccCChHHHHHH
Confidence            444556789999985 68999999999999999999999976432         1122 34789999999999988875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.31  E-value=8.8e-07  Score=67.73  Aligned_cols=31  Identities=29%  Similarity=0.400  Sum_probs=28.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEE
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTF   35 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~   35 (91)
                      +..|+||||||+||||++|++.|.++|++|.
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~  408 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYE  408 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence            4567999999999999999999999999984

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.26  E-value=2.5e-06  Score=69.36  Aligned_cols=62  Identities=15%  Similarity=0.269  Sum_probs=43.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCCCCCCCcchHHHhh-hh---------cCCCeEEEEeeCCCh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTQNSRPSKLEIHK-EF---------QGIGVTIIENLCDVG   71 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~-~l---------~~~~v~~v~gDl~d~   71 (91)
                      .++|+|||||||+|++++++|++++    ++|+++.|.....   +....+. .+         ...+++++.+|+.++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~---~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE---AGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH---HHHHHHHHHHHHhCCCchhhhcceEEEeccCCCc
Confidence            4789999999999999999999876    8899999965321   1111111 00         012688999999754

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.25  E-value=1e-05  Score=53.24  Aligned_cols=68  Identities=12%  Similarity=0.175  Sum_probs=49.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ...++++|+||+|.+|+.+++.|.+.|++|+++.|+.      ++...+ ..+. ..+.++...|..+.+.+.+.+
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~------~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   95 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL------ERAQKAADSLRARFGEGVGAVETSDDAARAAAI   95 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH------HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH
Confidence            4567999999999999999999999999999999864      222221 1121 124556677888877776654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.25  E-value=4.5e-06  Score=57.29  Aligned_cols=79  Identities=16%  Similarity=0.149  Sum_probs=56.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      ..+++++||+.|.||..+..+|+++|..+.++.-+..+.  ...+++....+...+.|+++|+++...++.++-.=..-+
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~--~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP--EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH--HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            357899999999999999999999998888776543321  112222222334568899999999999988864444444


Q ss_pred             h
Q 037506           86 G   86 (91)
Q Consensus        86 ~   86 (91)
                      |
T Consensus        82 g   82 (261)
T KOG4169|consen   82 G   82 (261)
T ss_pred             C
Confidence            4

>PRK09620 hypothetical protein; Provisional

Probab=98.20  E-value=3.9e-06  Score=57.24  Aligned_cols=36  Identities=22%  Similarity=0.343  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCC----------------chHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGT----------------GYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGat----------------G~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+||+|.                ||+|++++++|+++|++|+++++..
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~   53 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYF   53 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            45789999885                9999999999999999999998754

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.19  E-value=9e-06  Score=55.20  Aligned_cols=65  Identities=17%  Similarity=0.288  Sum_probs=50.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+++|+|+ |.+|.++++.|.+.||+|++++++.      ++...... .......+.+|-+|++.++++-.+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~------~~~~~~~~-~~~~~~~v~gd~t~~~~L~~agi~   65 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDE------ERVEEFLA-DELDTHVVIGDATDEDVLEEAGID   65 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCH------HHHHHHhh-hhcceEEEEecCCCHHHHHhcCCC
Confidence            57899998 9999999999999999999999974      22221111 124678999999999999887444

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.19  E-value=1.5e-05  Score=56.25  Aligned_cols=69  Identities=12%  Similarity=0.055  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +...|+||||++.+|+.++.++.++|..+.+.+.+..+.  .+..+.....  ..+..+.+|++|.+.+.+..
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~--~etv~~~~~~--g~~~~y~cdis~~eei~~~a  105 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN--EETVKEIRKI--GEAKAYTCDISDREEIYRLA  105 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch--HHHHHHHHhc--CceeEEEecCCCHHHHHHHH
Confidence            456799999999999999999999999888998876443  2222222221  14788999999999888764

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.17  E-value=9.1e-06  Score=56.58  Aligned_cols=77  Identities=14%  Similarity=0.096  Sum_probs=54.7

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh--hcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE--FQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~--l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .....+.++|||++.-||..+++.|.+.|.+|++..|+....  .+....+..  .....+..+.+|+++.+.+++....
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERL--EETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            345678899999999999999999999999999999975321  000100011  1123478899999998888876433


Q ss_pred             h
Q 037506           81 S   81 (91)
Q Consensus        81 ~   81 (91)
                      .
T Consensus        82 ~   82 (270)
T KOG0725|consen   82 A   82 (270)
T ss_pred             H
Confidence            3

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.14  E-value=7.4e-06  Score=58.16  Aligned_cols=65  Identities=18%  Similarity=0.230  Sum_probs=50.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCC-CeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGI-GVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~-~v~~v~gDl~d~~~l~~~~   78 (91)
                      -..|+|||||+|++++..|.+.|-+|++-.|...     ....+++.+.+. .+-+..-|+.|++++++++
T Consensus        63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~-----~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vv  128 (391)
T KOG2865|consen   63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDE-----YDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVV  128 (391)
T ss_pred             EEEEecccccccHHHHHHHhhcCCeEEEeccCCc-----cchhheeecccccceeeeccCCCCHHHHHHHH
Confidence            4579999999999999999999999999998642     222233333332 4678899999999999975

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=98.13  E-value=1e-05  Score=48.85  Aligned_cols=61  Identities=20%  Similarity=0.304  Sum_probs=46.4

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+|+|. |.+|..+++.|.+.+++|+++++++      +..   ..+...++.++.||.+|++.++++-..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~------~~~---~~~~~~~~~~i~gd~~~~~~l~~a~i~   61 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP------ERV---EELREEGVEVIYGDATDPEVLERAGIE   61 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSH------HHH---HHHHHTTSEEEES-TTSHHHHHHTTGG
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc------HHH---HHHHhcccccccccchhhhHHhhcCcc
Confidence            578888 8999999999999777999999863      332   233345789999999999999886433

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.13  E-value=6.1e-06  Score=58.47  Aligned_cols=65  Identities=25%  Similarity=0.268  Sum_probs=48.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhh---cCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEF---QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l---~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .=..|||||..||+..+++|.++|++|.++.|+.+      |++.. +++   ....++++..|+++++.+.+.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~------KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i  118 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQE------KLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKL  118 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHH------HHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHH
Confidence            44689999999999999999999999999999853      33221 112   2235788999999877644443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.10  E-value=1e-05  Score=60.19  Aligned_cols=67  Identities=15%  Similarity=0.285  Sum_probs=45.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCCCCCCCcchH------HHhhhhcC------CCeEEEEeeCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTQNSRPSKL------EIHKEFQG------IGVTIIENLCDV   70 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~------~~~~~l~~------~~v~~v~gDl~d   70 (91)
                      ..+.|+|||||||+|.-+++.|++..   .+++++.|...+.+..++.      +.+..+..      .++..+.||+.+
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            45789999999999999999999864   4788889987654111111      11111111      256788899987


Q ss_pred             hh
Q 037506           71 GQ   72 (91)
Q Consensus        71 ~~   72 (91)
                      ++
T Consensus        91 ~~   92 (467)
T KOG1221|consen   91 PD   92 (467)
T ss_pred             cc
Confidence            54

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.10  E-value=2e-05  Score=52.56  Aligned_cols=72  Identities=15%  Similarity=0.013  Sum_probs=55.8

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+.....+.|++||+.-.||+.++..|.+.|.+|+++.|+.      +....+-...+.-++.+.+|+.+.+.+++.+
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~------a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l   72 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNE------ANLLSLVKETPSLIIPIVGDLSAWEALFKLL   72 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCH------HHHHHHHhhCCcceeeeEecccHHHHHHHhh
Confidence            44455678899999999999999999999999999999974      2332222223334899999999988888865

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.07  E-value=1.8e-05  Score=57.78  Aligned_cols=61  Identities=15%  Similarity=0.185  Sum_probs=47.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |+|+|+|+ |.+|.++++.|.+.|++|+++++++      ++.+.+..  ..+++++.+|.+++..+.++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~------~~~~~~~~--~~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDE------ERLRRLQD--RLDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCH------HHHHHHHh--hcCEEEEEeCCCCHHHHHHc
Confidence            58999998 9999999999999999999999864      22222111  24688999999988877765

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.05  E-value=1.7e-05  Score=58.25  Aligned_cols=38  Identities=24%  Similarity=0.385  Sum_probs=34.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +..+.|+|+||||.+|+.+++.|+++|+.|++++|+..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~  114 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQ  114 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChh
Confidence            44578999999999999999999999999999999853

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.00  E-value=1.3e-05  Score=56.32  Aligned_cols=34  Identities=26%  Similarity=0.277  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |+|||||++|++|..|+++|. .+++|++++|..-
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~   34 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAEL   34 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCccc
Confidence            459999999999999999998 7799999998763

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.97  E-value=4.6e-05  Score=54.90  Aligned_cols=62  Identities=18%  Similarity=0.191  Sum_probs=44.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC-C-cEEEEecCCCCCCCcchHHHhh-hhcCCCeEEEEeeCCChhhhhHHH
Q 037506           10 KLIFGGTGYLGKYMVKASVSSG-H-NTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g-~-~V~~~~R~~~~~~~~~~~~~~~-~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|+ |++|+.+++.|.++. + +|++.+|+.      ++.+.+. .+...++++++.|+.|.+++.+.+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~------~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~   65 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNP------EKAERLAEKLLGDRVEAVQVDVNDPESLAELL   65 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSH------HHHHHHHT--TTTTEEEEE--TTTHHHHHHHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCH------HHHHHHHhhccccceeEEEEecCCHHHHHHHH
Confidence            789999 999999999999886 4 899999974      3333222 223457999999999999988864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=97.96  E-value=3.3e-05  Score=52.30  Aligned_cols=76  Identities=12%  Similarity=0.100  Sum_probs=57.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      ..+..+||||+..||++++..|.+.|++|.+.++++...     ......+.. .+-..+.+|+.++..++..+...-+.
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A-----~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA-----EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH-----HHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh
Confidence            346789999999999999999999999999999876432     112233333 24567899999999998877666666


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      ||
T Consensus        88 ~g   89 (256)
T KOG1200|consen   88 LG   89 (256)
T ss_pred             cC
Confidence            66

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.90  E-value=6e-05  Score=55.23  Aligned_cols=61  Identities=18%  Similarity=0.238  Sum_probs=46.9

Q ss_pred             CCCCeEEEEcC----------------CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeC
Q 037506            5 NTKPKKLIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLC   68 (91)
Q Consensus         5 ~~~~~ilItGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl   68 (91)
                      +..++++||||                ||.+|.+++++|.++|++|++++++....           . ..+  +...|+
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~-----------~-~~~--~~~~dv  251 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP-----------T-PAG--VKRIDV  251 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc-----------C-CCC--cEEEcc
Confidence            56689999999                99999999999999999999999864210           0 112  345688


Q ss_pred             CChhhhhHHHh
Q 037506           69 DVGQVTSSQRM   79 (91)
Q Consensus        69 ~d~~~l~~~~~   79 (91)
                      ++.+++.+++.
T Consensus       252 ~~~~~~~~~v~  262 (399)
T PRK05579        252 ESAQEMLDAVL  262 (399)
T ss_pred             CCHHHHHHHHH
Confidence            88888877653

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.89  E-value=2.3e-05  Score=53.32  Aligned_cols=27  Identities=26%  Similarity=0.474  Sum_probs=25.0

Q ss_pred             CCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           15 GTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        15 atG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|||+|++++++|+++||+|+++.|+.
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~   50 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKT   50 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECcc
Confidence            689999999999999999999999764

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.89  E-value=3.7e-05  Score=58.07  Aligned_cols=63  Identities=11%  Similarity=0.227  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+|+|+|. |.+|+.+++.|.++|++|+++++++      ++.+.   .++.+...+.||.+|++.++++-..
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~------~~~~~---~~~~g~~~i~GD~~~~~~L~~a~i~  480 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSR------TRVDE---LRERGIRAVLGNAANEEIMQLAHLD  480 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCH------HHHHH---HHHCCCeEEEcCCCCHHHHHhcCcc
Confidence            57899998 9999999999999999999999863      33332   2335789999999999988876433

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.88  E-value=0.00015  Score=53.19  Aligned_cols=79  Identities=14%  Similarity=0.095  Sum_probs=52.5

Q ss_pred             CCeEEEEcCCchHHHH--HHHHHHhCCCcEEEEecCCCCCCCc-------chHHHhhhhcC--CCeEEEEeeCCChhhhh
Q 037506            7 KPKKLIFGGTGYLGKY--MVKASVSSGHNTFVYARPVTQNSRP-------SKLEIHKEFQG--IGVTIIENLCDVGQVTS   75 (91)
Q Consensus         7 ~~~ilItGatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~~~-------~~~~~~~~l~~--~~v~~v~gDl~d~~~l~   75 (91)
                      .|+++|||+++.+|.+  +++.| +.|.+|.++++........       ...........  ..+..+.+|+++++.+.
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~  119 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ  119 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            5789999999999999  89999 9999988888532111000       00011111122  23567899999999998


Q ss_pred             HHHhhhhhhhh
Q 037506           76 SQRMRSGRSLG   86 (91)
Q Consensus        76 ~~~~~~~~~~~   86 (91)
                      +.+..-...+|
T Consensus       120 ~lie~I~e~~G  130 (398)
T PRK13656        120 KVIELIKQDLG  130 (398)
T ss_pred             HHHHHHHHhcC
Confidence            87655555555

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.86  E-value=5.9e-05  Score=53.88  Aligned_cols=35  Identities=17%  Similarity=0.179  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCc---EEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHN---TFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~---V~~~~R~~   41 (91)
                      +++|+|+||||++|+.+++.|.+++|+   +..+.+..
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~   38 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR   38 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence            368999999999999999999998775   47777654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.82  E-value=0.00012  Score=53.46  Aligned_cols=65  Identities=17%  Similarity=0.196  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+++|+|+|+ |.+|..+++.|.+.|++|+++++++      ++.+.+... ..++.++.||.++++.+.++-
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~------~~~~~~~~~-~~~~~~i~gd~~~~~~L~~~~  294 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDP------ERAEELAEE-LPNTLVLHGDGTDQELLEEEG  294 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH------HHHHHHHHH-CCCCeEEECCCCCHHHHHhcC
Confidence            3578999999 9999999999999999999999864      332222211 136788999999998887654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=97.80  E-value=0.00022  Score=50.86  Aligned_cols=76  Identities=13%  Similarity=0.096  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +.+-|+|||+-...|..++.+|.+.|+.|.+-.-.+.+      ++.+.... .++...++-|++++++++++..-=...
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~g------ae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~  101 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEG------AESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKH  101 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCch------HHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHh
Confidence            45679999999999999999999999999998844322      22222222 457788899999999999986444445


Q ss_pred             hhc
Q 037506           85 LGH   87 (91)
Q Consensus        85 ~~~   87 (91)
                      |++
T Consensus       102 l~~  104 (322)
T KOG1610|consen  102 LGE  104 (322)
T ss_pred             ccc
Confidence            554

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.80  E-value=6.3e-05  Score=57.49  Aligned_cols=64  Identities=16%  Similarity=0.217  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++|+|+|. |.+|+.+++.|.++|++++++++++      ++.+   ..+..+..+++||.+|++.++++-.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~------~~v~---~~~~~g~~v~~GDat~~~~L~~agi~  463 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDI------SAVN---LMRKYGYKVYYGDATQLELLRAAGAE  463 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCH------HHHH---HHHhCCCeEEEeeCCCHHHHHhcCCc
Confidence            468999998 9999999999999999999999863      3333   23345789999999999988876433

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.79  E-value=4.5e-05  Score=54.86  Aligned_cols=38  Identities=21%  Similarity=0.300  Sum_probs=32.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhC-C-CcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSS-G-HNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~-g-~~V~~~~R~~   41 (91)
                      ..+.++|+||||+|+||+.++++|.++ + .+++++.|+.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~  191 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ  191 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH
Confidence            356789999999999999999999864 4 6888888863

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.78  E-value=9.5e-05  Score=56.77  Aligned_cols=62  Identities=19%  Similarity=0.281  Sum_probs=50.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .++|+|+|. |.+|+.+++.|.++|+++++++.++      ++.+.   +...+.++++||.+|++.++++-
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~------~~v~~---~~~~g~~v~~GDat~~~~L~~ag  461 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDP------DHIET---LRKFGMKVFYGDATRMDLLESAG  461 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCH------HHHHH---HHhcCCeEEEEeCCCHHHHHhcC
Confidence            468999999 9999999999999999999999864      33332   33357899999999999888753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.77  E-value=9.6e-05  Score=54.05  Aligned_cols=61  Identities=15%  Similarity=0.127  Sum_probs=42.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDV   70 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d   70 (91)
                      +..++++|+|+++ +|..+++.|.+.|++|+++++....    ...+....+...+++++.+|..+
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~----~~~~~~~~l~~~~~~~~~~~~~~   63 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED----QLKEALEELGELGIELVLGEYPE   63 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH----HHHHHHHHHHhcCCEEEeCCcch
Confidence            5568999999966 9999999999999999999986421    11111222333356666666554

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.77  E-value=6.9e-05  Score=50.29  Aligned_cols=67  Identities=13%  Similarity=0.167  Sum_probs=48.1

Q ss_pred             cCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506           14 GGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus        14 Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      |++  +-||..++++|+++|++|++.+|+...     ....+..+. ..+.+++.+|++|++.+.+.+.......
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   70 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEK-----LADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERF   70 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHH-----HHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhc
Confidence            566  899999999999999999999997421     111122221 2345689999999999999865544444

...

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.77  E-value=5.9e-05  Score=50.67  Aligned_cols=34  Identities=26%  Similarity=0.400  Sum_probs=31.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+||+|.+|+.++..|.+.||+|++.+|+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence            5799999999999999999999999999998864

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.69  E-value=9.2e-05  Score=52.80  Aligned_cols=66  Identities=21%  Similarity=0.113  Sum_probs=50.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+|+||||+..+|..++..+..+|.+|+++.|+....     .+....++    ...+.+..+|+.|.+++...+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl-----~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~  103 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKL-----LEAKAELELLTQVEDVSYKSVDVIDYDSVSKVI  103 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHH-----HHHHhhhhhhhccceeeEeccccccHHHHHHHH
Confidence            5899999999999999999999999999999975332     11111111    112568889999999888864

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.68  E-value=0.00039  Score=49.12  Aligned_cols=35  Identities=20%  Similarity=0.163  Sum_probs=31.0

Q ss_pred             CCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +..+.++||||  +..||..+++.|.+.|.+|++ .|.
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~   43 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW   43 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence            56788999999  789999999999999999988 554

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=97.67  E-value=0.00011  Score=52.06  Aligned_cols=68  Identities=13%  Similarity=0.099  Sum_probs=48.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhh-hcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~-l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++++||||+||||++.+..+...  .++.+.++...-.. +   ...+.+ ...++.+++++|+.+...+.-.++
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s-~---~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~   77 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCS-N---LKNLEPVRNSPNYKFVEGDIADADLVLYLFE   77 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccc-c---cchhhhhccCCCceEeeccccchHHHHhhhc
Confidence            78999999999999999999975  47777777654332 1   111122 234578999999999877765543

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.62  E-value=9.3e-05  Score=53.93  Aligned_cols=36  Identities=17%  Similarity=0.314  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~   41 (91)
                      .+++|.|.||||++|..+++.|.++ .++++.+.+..
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~   73 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADR   73 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChh
Confidence            3568999999999999999999988 57999988754

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.56  E-value=0.00017  Score=51.75  Aligned_cols=37  Identities=24%  Similarity=0.236  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      |.+++|+|+|||||+|+.+++.|.+..+ +++.+.+..
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            4468999999999999999999998664 888875543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.53  E-value=0.00036  Score=49.01  Aligned_cols=71  Identities=18%  Similarity=0.141  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCc-----EEEEecCCCCCCCcchHHHhhhhcC---CCeEEEEeeCCChhhhhHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHN-----TFVYARPVTQNSRPSKLEIHKEFQG---IGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~-----V~~~~R~~~~~~~~~~~~~~~~l~~---~~v~~v~gDl~d~~~l~~~   77 (91)
                      ..+-++|||++..+|..++.+|++...+     +.+..|+.++.  .+....+.++-+   ..++++..|+++-.++.++
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ka--e~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A   79 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKA--EAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRA   79 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHH--HHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHH
Confidence            4566899999999999999999986543     44566765432  111122222222   3578899999998887776


Q ss_pred             H
Q 037506           78 R   78 (91)
Q Consensus        78 ~   78 (91)
                      .
T Consensus        80 ~   80 (341)
T KOG1478|consen   80 S   80 (341)
T ss_pred             H
Confidence            3

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.48  E-value=0.00025  Score=50.64  Aligned_cols=35  Identities=11%  Similarity=0.150  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~   41 (91)
                      ..+|+||||+|++|++++..|+..+       +++.+++++.
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            3589999999999999999998744       5899999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.46  E-value=0.00041  Score=48.62  Aligned_cols=68  Identities=7%  Similarity=0.006  Sum_probs=45.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHH-hhhhcC--CCeEEEEeeCCChhhhhHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~-~~~l~~--~~v~~v~gDl~d~~~l~~~   77 (91)
                      ..++++|+|| |.+|++++..|.+.|.. |+++.|+...   .++.+. ...+..  ..+.+...|+.+.+.+.+.
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~---~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~  196 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDF---YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAE  196 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchH---HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhh
Confidence            4568999999 78999999999999986 9999997411   012211 122221  2345566788776666553

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.44  E-value=0.00033  Score=43.00  Aligned_cols=33  Identities=18%  Similarity=0.373  Sum_probs=26.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC-CcEEEEe-cCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG-HNTFVYA-RPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~-R~~   41 (91)
                      ||.|+||||++|+.+++.|.++- +++..+. +..
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            68999999999999999999854 4655544 443

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.40  E-value=0.00032  Score=50.36  Aligned_cols=31  Identities=16%  Similarity=0.174  Sum_probs=26.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEE
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFV   36 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~   36 (91)
                      ++++|.|+||||++|..+++.|.+++|.+.-
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~   33 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGT   33 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceE
Confidence            3479999999999999999999987765443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.40  E-value=0.00037  Score=47.39  Aligned_cols=26  Identities=31%  Similarity=0.498  Sum_probs=23.7

Q ss_pred             CCchHHHHHHHHHHhCCCcEEEEecC
Q 037506           15 GTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus        15 atG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +||.||.+++++|.++|++|+++.|.
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~   48 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTK   48 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcCh
Confidence            58999999999999999999998763

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK04148 hypothetical protein; Provisional

Probab=97.38  E-value=0.00063  Score=43.07  Aligned_cols=55  Identities=15%  Similarity=0.092  Sum_probs=41.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQ   72 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~   72 (91)
                      .++++++|. | -|.+++..|.+.|++|++++.++.      ..   .......++++.+|+.+++
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~------aV---~~a~~~~~~~v~dDlf~p~   71 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEK------AV---EKAKKLGLNAFVDDLFNPN   71 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHH------HH---HHHHHhCCeEEECcCCCCC
Confidence            468999998 6 788889999999999999998642      22   2222346788999998754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.34  E-value=0.0011  Score=57.77  Aligned_cols=34  Identities=12%  Similarity=0.021  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~   40 (91)
                      .+.++||||++.||..++++|.++ |.+|+++.|+
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            468999999999999999999998 5899999987

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=97.32  E-value=0.00087  Score=38.07  Aligned_cols=34  Identities=21%  Similarity=0.456  Sum_probs=30.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      +|+|+|| |++|.-++..|.+.|.+|+++.|....
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            5889999 999999999999999999999997654

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.30  E-value=0.00044  Score=50.17  Aligned_cols=35  Identities=26%  Similarity=0.356  Sum_probs=32.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|.|+||+|.+|.+++..|.+.|++|++++|+.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            46899999999999999999999999999999864

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.30  E-value=0.00055  Score=48.18  Aligned_cols=33  Identities=18%  Similarity=0.328  Sum_probs=30.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|.|+|+ |++|+.++..|.++|++|++++|+.
T Consensus         3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            57999995 9999999999999999999999874

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.29  E-value=0.00028  Score=51.35  Aligned_cols=64  Identities=23%  Similarity=0.353  Sum_probs=45.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHh----CCCcEEEEecCCCCCCCcchHH-HhhhhcC------CCeEEEEeeCCChhhhhHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTQNSRPSKLE-IHKEFQG------IGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~------~~v~~v~gDl~d~~~l~~~   77 (91)
                      -+.|.|||||.|.++++++++    .+...-+..|+..      +.. .+.....      ...-++.+|.+|++++.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~------KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~em   80 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEK------KLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEM   80 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHH------HHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHH
Confidence            478999999999999999998    6677777778743      222 1111111      1123788999999999986


Q ss_pred             H
Q 037506           78 R   78 (91)
Q Consensus        78 ~   78 (91)
                      .
T Consensus        81 a   81 (423)
T KOG2733|consen   81 A   81 (423)
T ss_pred             H
Confidence            3

>PRK10537 voltage-gated potassium channel; Provisional

Probab=97.29  E-value=0.001  Score=48.70  Aligned_cols=62  Identities=13%  Similarity=-0.034  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.+++|+|. |.+|+.+++.|.++|+++++++.+..     +      .....+..++.||.+|++.++++-.+
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~-----~------~~~~~g~~vI~GD~td~e~L~~AgI~  301 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL-----E------HRLPDDADLIPGDSSDSAVLKKAGAA  301 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh-----h------hhccCCCcEEEeCCCCHHHHHhcCcc
Confidence            457899998 88999999999999999999885421     1      11223678999999999888876433

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.29  E-value=0.00048  Score=50.59  Aligned_cols=36  Identities=17%  Similarity=0.085  Sum_probs=32.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |.+++|.|+|. |++|..++..|.+.||+|+++++++
T Consensus         1 m~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~   36 (415)
T PRK11064          1 MSFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQ   36 (415)
T ss_pred             CCccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCH
Confidence            44689999988 9999999999999999999999875

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.27  E-value=0.00091  Score=46.40  Aligned_cols=26  Identities=38%  Similarity=0.612  Sum_probs=23.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH   32 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~   32 (91)
                      +++|+|||++|.+|+++.+.+.+++.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~   26 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGF   26 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCC
Confidence            47899999999999999999999876

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=97.23  E-value=0.0008  Score=47.41  Aligned_cols=36  Identities=19%  Similarity=0.344  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+|+|+|+|+ |-+|+.++..|.+.|++|+++.|..
T Consensus         3 ~~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~   38 (313)
T PRK06249          3 SETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD   38 (313)
T ss_pred             CcCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            35679999988 9999999999999999999999964

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.22  E-value=0.00067  Score=50.17  Aligned_cols=34  Identities=35%  Similarity=0.481  Sum_probs=31.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+||+|.+|.+++..|.+.|++|++++|+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            5799999999999999999999999999999864

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.22  E-value=0.00083  Score=48.21  Aligned_cols=28  Identities=25%  Similarity=0.243  Sum_probs=24.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEE
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFV   36 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~   36 (91)
                      +|+|+||||++|..|++.|.+++|++.-
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~   28 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDK   28 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhh
Confidence            5899999999999999999998887543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.21  E-value=0.0025  Score=42.66  Aligned_cols=72  Identities=17%  Similarity=0.218  Sum_probs=55.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhhh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLG   86 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~~   86 (91)
                      --+||||...+|..-+++|.++|..|.+++-+.++.     .+..+++. .++-|...|++.+..++.++..+-.-.|
T Consensus        11 valvtggasglg~ataerlakqgasv~lldlp~skg-----~~vakelg-~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen   11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-----ADVAKELG-GKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-----hHHHHHhC-CceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            358999999999999999999999999999876543     12223343 3678889999999999998765443333

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.19  E-value=0.0013  Score=43.89  Aligned_cols=37  Identities=14%  Similarity=0.086  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+..++|.|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            456689999999 7999999999999999999888753

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=97.18  E-value=0.0009  Score=48.27  Aligned_cols=33  Identities=21%  Similarity=0.274  Sum_probs=30.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+|+|+|| |++|..++.+|.+.|++|+++.|..
T Consensus         2 ~~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~   34 (410)
T PRK12409          2 SHIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR   34 (410)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            48999999 9999999999999999999999864

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.17  E-value=0.00095  Score=44.74  Aligned_cols=37  Identities=16%  Similarity=0.277  Sum_probs=33.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |.+|..+|.||||.+|+-+++.+++++  -+|+++.|..
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~   54 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRE   54 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEecc
Confidence            667899999999999999999999988  4899999875

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.15  E-value=0.0024  Score=46.77  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=32.8

Q ss_pred             CCCCeEEEEcC----------------CchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +..++++||||                ||.+|.+++++|.++|++|+++.++.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~  235 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPV  235 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            56689999999                47899999999999999999998764

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.14  E-value=0.00098  Score=47.85  Aligned_cols=34  Identities=18%  Similarity=0.240  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~   40 (91)
                      +++|+|+||||++|+.+++.|.+. +++++++.++
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~   36 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR   36 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence            379999999999999999999976 5788777653

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=97.13  E-value=0.001  Score=47.08  Aligned_cols=33  Identities=18%  Similarity=0.402  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +|+|.|+|+ |.+|+.++..|.+.|++|++++|+
T Consensus         2 ~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~   34 (341)
T PRK08229          2 MARICVLGA-GSIGCYLGGRLAAAGADVTLIGRA   34 (341)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhcCCcEEEEecH
Confidence            368999988 999999999999999999999985

>PRK06849 hypothetical protein; Provisional

Probab=97.13  E-value=0.0013  Score=47.56  Aligned_cols=37  Identities=22%  Similarity=0.206  Sum_probs=33.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+|+|||||++..+|..+++.|.+.|++|++++...
T Consensus         2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            3568999999999999999999999999999998764

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.13  E-value=0.0015  Score=41.35  Aligned_cols=34  Identities=18%  Similarity=0.231  Sum_probs=30.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |||.|+|++|.+|++++..|...+  .++.+++++.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~   36 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINE   36 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCc
Confidence            689999999999999999999877  5899999863

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.11  E-value=0.00085  Score=44.32  Aligned_cols=33  Identities=24%  Similarity=0.296  Sum_probs=26.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. ||+|..++..|.+.||+|++++.++
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCCh
Confidence            68999977 9999999999999999999999864

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.10  E-value=0.0011  Score=47.74  Aligned_cols=33  Identities=21%  Similarity=0.279  Sum_probs=27.5

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCc
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHN   33 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~   33 (91)
                      |.-..+.++|.|+||||++|..+++.|.+++|.
T Consensus         1 ~~~~~~~~kVaVvGAtG~vG~eLlrlL~~~~hP   33 (344)
T PLN02383          1 MALTENGPSVAIVGVTGAVGQEFLSVLTDRDFP   33 (344)
T ss_pred             CCccCCCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence            333456679999999999999999999988874

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.07  E-value=0.0015  Score=45.34  Aligned_cols=36  Identities=14%  Similarity=0.184  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+.++|.|+|+ |.+|..++..|.+.|++|++++++.
T Consensus         1 ~~~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~   36 (282)
T PRK05808          1 MGIQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISD   36 (282)
T ss_pred             CCccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCH
Confidence            34568999999 9999999999999999999998764

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.05  E-value=0.0014  Score=42.06  Aligned_cols=34  Identities=26%  Similarity=0.324  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |++|.++|- |-+|+.+++.|+++||+|++++|++
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~   34 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSP   34 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccch
Confidence            578999999 9999999999999999999999874

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.05  E-value=0.0017  Score=45.69  Aligned_cols=36  Identities=22%  Similarity=0.371  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..|+|.|+|+ |.+|+.++..|.+.||+|++++|+..
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4578999988 99999999999999999999999753

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.04  E-value=0.0018  Score=45.60  Aligned_cols=39  Identities=21%  Similarity=0.029  Sum_probs=32.7

Q ss_pred             CCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecC
Q 037506            2 EGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         2 ~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ......|.++|||++  ..||.++++.|.++|++|.+.+|.
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            344567889999994  789999999999999999987643

>PRK06444 prephenate dehydrogenase; Provisional

Probab=97.02  E-value=0.0011  Score=44.32  Aligned_cols=29  Identities=21%  Similarity=0.461  Sum_probs=26.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEE
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFV   36 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~   36 (91)
                      |+|.|+||+|.+|+++++.|.+.||.|++
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~~   29 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVYI   29 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEEE
Confidence            58999999999999999999999999863

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.02  E-value=0.0016  Score=45.57  Aligned_cols=33  Identities=24%  Similarity=0.414  Sum_probs=30.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~   34 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDP   34 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            68999998 9999999999999999999999864

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.01  E-value=0.0029  Score=46.32  Aligned_cols=35  Identities=23%  Similarity=0.133  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++++|||+++ +|.+.++.|.+.|++|++.++..
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~   38 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKP   38 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCC
Confidence            457899999977 99999999999999999998754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.00  E-value=0.0027  Score=39.75  Aligned_cols=37  Identities=16%  Similarity=0.215  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~   41 (91)
                      ....++++|+|+ |..|+.++..|.+.|.+ |+++.|+.
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~   46 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTP   46 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCH
Confidence            346789999999 88999999999999976 99999963

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00711 D-amino acid dehydrogenase small subunit; Validated

Probab=96.95  E-value=0.0018  Score=46.67  Aligned_cols=33  Identities=21%  Similarity=0.330  Sum_probs=30.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+|| |.+|.+++.+|.++|++|+++.+..
T Consensus         1 ~~v~IVG~-Gi~Gls~A~~l~~~g~~V~vle~~~   33 (416)
T PRK00711          1 MRVVVLGS-GVIGVTSAWYLAQAGHEVTVIDRQP   33 (416)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            47999999 9999999999999999999999864

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.95  E-value=0.0055  Score=44.23  Aligned_cols=60  Identities=20%  Similarity=0.221  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++|+|+|+ |.+|..++..+.+.|++|++++.++..   |.     ..+   .-..+.+|+.|.+.+.+..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~---pa-----~~~---ad~~~~~~~~D~~~l~~~a   61 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDS---PA-----AQV---ADEVIVADYDDVAALRELA   61 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC---ch-----hHh---CceEEecCCCCHHHHHHHH
Confidence            468999999 899999999999999999999876422   11     111   1245667888888777753

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.95  E-value=0.0024  Score=44.52  Aligned_cols=36  Identities=14%  Similarity=0.231  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |..++|.|+|+ |.+|..++..|+.+|++|++++|+.
T Consensus         2 ~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~   37 (292)
T PRK07530          2 MAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSA   37 (292)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            45578999999 9999999999999999999999864

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.94  E-value=0.002  Score=44.65  Aligned_cols=33  Identities=30%  Similarity=0.396  Sum_probs=30.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+|+ |-+|+.++..|.+.|++|++++|+.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRG   33 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCh
Confidence            57999998 9999999999999999999999953

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.93  E-value=0.0021  Score=45.48  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=30.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      |+|.|+|+||++|..++..|+..|+  +|++++|..
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            6899999999999999999999885  599999853

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.92  E-value=0.0024  Score=41.17  Aligned_cols=34  Identities=18%  Similarity=0.177  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      ...++|+|+|| |-+|...++.|++.|++|++++.
T Consensus        11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            45679999999 99999999999999999999964

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.91  E-value=0.0025  Score=44.46  Aligned_cols=34  Identities=12%  Similarity=0.170  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|.|+|+ |.+|+.++..|...|++|++++++.
T Consensus         3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~   36 (291)
T PRK06035          3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSE   36 (291)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            468999998 9999999999999999999999864

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.91  E-value=0.0019  Score=43.72  Aligned_cols=33  Identities=18%  Similarity=0.267  Sum_probs=27.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++..+||+|.||+.++++|.+.||+|++-.|+.
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~   34 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRG   34 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCC
Confidence            344556669999999999999999999997764

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.89  E-value=0.0025  Score=42.65  Aligned_cols=35  Identities=17%  Similarity=0.253  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ...++|+|+|| |-+|...++.|++.|.+|+++.+.
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            45679999999 999999999999999999999865

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=96.89  E-value=0.0027  Score=44.25  Aligned_cols=35  Identities=14%  Similarity=0.299  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|.|+|+ |.+|+.++..|+..|++|++++++.
T Consensus         3 ~~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~   37 (295)
T PLN02545          3 EIKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDP   37 (295)
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            3468999999 9999999999999999999999864

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.88  E-value=0.0029  Score=45.22  Aligned_cols=37  Identities=14%  Similarity=0.211  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -+..++|.|+|+ |-+|+.++..++..|++|+++++++
T Consensus         4 ~~~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~   40 (321)
T PRK07066          4 ITDIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAP   40 (321)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            345578999998 9999999999999999999999864

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.85  E-value=0.0026  Score=41.75  Aligned_cols=32  Identities=22%  Similarity=0.409  Sum_probs=28.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|.|+|+ |.+|+.++..++..|++|++++++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~   32 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSP   32 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence            5899999 9999999999999999999999875

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK07236 hypothetical protein; Provisional

Probab=96.84  E-value=0.0034  Score=45.03  Aligned_cols=37  Identities=19%  Similarity=0.376  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .|+.++|+|+|| |..|..++..|.+.|++|+++.|.+
T Consensus         3 ~~~~~~ViIVGa-G~aGl~~A~~L~~~G~~v~v~E~~~   39 (386)
T PRK07236          3 HMSGPRAVVIGG-SLGGLFAALLLRRAGWDVDVFERSP   39 (386)
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            366789999999 9999999999999999999999875

>PLN00106 malate dehydrogenase

Probab=96.84  E-value=0.0037  Score=44.74  Aligned_cols=38  Identities=13%  Similarity=0.133  Sum_probs=31.9

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      .-...||.|||++|.+|+.++..|...+  .++.+++++.
T Consensus        15 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~   54 (323)
T PLN00106         15 GAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN   54 (323)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            3456799999999999999999998665  5899998865

>PRK05086 malate dehydrogenase; Provisional

Probab=96.83  E-value=0.0022  Score=45.59  Aligned_cols=34  Identities=18%  Similarity=0.286  Sum_probs=28.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHh---CCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVS---SGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~---~g~~V~~~~R~~   41 (91)
                      |||+|+||||.+|++++..|..   .++++++++|+.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~   37 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP   37 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence            6899999999999999988754   346888888864

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=96.82  E-value=0.0026  Score=44.20  Aligned_cols=31  Identities=16%  Similarity=0.290  Sum_probs=29.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |+|+|+|+ |.+|..++..|.+.|++|++++|
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Confidence            57999988 99999999999999999999998

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.82  E-value=0.0089  Score=40.11  Aligned_cols=36  Identities=19%  Similarity=0.236  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+.++|+|+|| |.+|..-++.|++.|.+|++++...
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~   42 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL   42 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            35679999999 9999999999999999999998653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.81  E-value=0.0034  Score=43.74  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|.|+|+ |.+|+.++..|...|++|++++++.
T Consensus         2 ~~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~   36 (287)
T PRK08293          2 DIKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISD   36 (287)
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            3468999998 9999999999999999999999864

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.74  E-value=0.0037  Score=43.52  Aligned_cols=33  Identities=21%  Similarity=0.292  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|.|+|+ |.+|..++..|.+.|++|++++++.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~   34 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQ   34 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCH
Confidence            57999999 9999999999999999999999874

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.73  E-value=0.0077  Score=44.62  Aligned_cols=35  Identities=17%  Similarity=0.079  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|+ |.+|..+++.|.++|++|+++++..
T Consensus        15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~   49 (480)
T PRK01438         15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGD   49 (480)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            3568999998 9999999999999999999998653

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=96.72  E-value=0.0038  Score=44.01  Aligned_cols=33  Identities=21%  Similarity=0.204  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .|+|+|.|+ |-||+.++-.|.+.|++|+++.|.
T Consensus         2 ~m~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~   34 (305)
T PRK05708          2 SMTWHILGA-GSLGSLWACRLARAGLPVRLILRD   34 (305)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhCCCCeEEEEec
Confidence            468999999 999999999999999999999996

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.72  E-value=0.0046  Score=43.36  Aligned_cols=34  Identities=15%  Similarity=0.156  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|.|+|+ |.+|+.++..|.+.|++|++++++.
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~   37 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME   37 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            468999988 9999999999999999999999864

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.70  E-value=0.0057  Score=38.36  Aligned_cols=36  Identities=22%  Similarity=0.269  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ...++++|+|+ |.+|..+++.|.+.+ ++|++++|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~   53 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTL   53 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH
Confidence            45678999998 999999999999986 8899998864

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK11259 solA N-methyltryptophan oxidase; Provisional

Probab=96.69  E-value=0.0039  Score=44.23  Aligned_cols=33  Identities=15%  Similarity=0.123  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -.|+|+|| |.+|.+++.+|.++|++|+++.|..
T Consensus         4 ~dv~IIGg-Gi~G~s~A~~L~~~g~~V~lie~~~   36 (376)
T PRK11259          4 YDVIVIGL-GSMGSAAGYYLARRGLRVLGLDRFM   36 (376)
T ss_pred             ccEEEECC-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence            35899999 9999999999999999999999864

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.68  E-value=0.0041  Score=43.99  Aligned_cols=34  Identities=21%  Similarity=0.305  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |-+|..++..|.+.||+|++++|+.
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~   37 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRP   37 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            468999988 9999999999999999999999963

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.66  E-value=0.0048  Score=43.22  Aligned_cols=35  Identities=14%  Similarity=0.332  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .++|.|+|+ |.+|..++..++..|++|+++++++.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~   39 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEE   39 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            358999999 99999999999999999999999753

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.64  E-value=0.0041  Score=43.17  Aligned_cols=33  Identities=27%  Similarity=0.239  Sum_probs=29.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |.+|..++..|.+.|++|++++|+.
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~   33 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRE   33 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            47999985 9999999999999999999999864

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.62  E-value=0.0053  Score=42.58  Aligned_cols=36  Identities=11%  Similarity=0.179  Sum_probs=30.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~   41 (91)
                      |+.|+|.|+|+ |-+|..+++.|++.|    ++|++++|+.
T Consensus         1 ~~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~   40 (279)
T PRK07679          1 MSIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSN   40 (279)
T ss_pred             CCCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence            45578999996 999999999999987    7888888853

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.62  E-value=0.0045  Score=44.37  Aligned_cols=32  Identities=19%  Similarity=0.248  Sum_probs=27.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R   39 (91)
                      ++|.|+|+||++|+.+++.|.++. .++..+..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            479999999999999999888876 58877743

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PLN02256 arogenate dehydrogenase

Probab=96.57  E-value=0.0061  Score=43.21  Aligned_cols=36  Identities=31%  Similarity=0.449  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+++|.|+|. |.+|.+++..|.+.|++|++++|+.
T Consensus        34 ~~~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~   69 (304)
T PLN02256         34 SRKLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSD   69 (304)
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECcc
Confidence            45679999995 9999999999999999999998864

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.56  E-value=0.0045  Score=44.52  Aligned_cols=30  Identities=20%  Similarity=0.301  Sum_probs=25.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC-CCcEEEE
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS-GHNTFVY   37 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~   37 (91)
                      ++|.|+||||++|..+++.|.+. .+++..+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l   31 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYL   31 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEE
Confidence            47999999999999999999976 4677744

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.56  E-value=0.0045  Score=45.23  Aligned_cols=33  Identities=21%  Similarity=0.215  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |++|..++..|.+.||+|++++++.
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~   33 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQ   33 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCH
Confidence            47999987 9999999999999999999999865

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.55  E-value=0.0058  Score=44.57  Aligned_cols=36  Identities=14%  Similarity=0.202  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~   41 (91)
                      .+++|.|+|.+|.||.++++.|.+. +++|++++|..
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d   39 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPAD   39 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCc
Confidence            4679999999999999999999864 88999998753

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.55  E-value=0.0051  Score=38.01  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=28.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHh-CCCcEEEE-ecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVS-SGHNTFVY-ARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~-~R~~   41 (91)
                      |||.|+|++|.+|+.+++.+.+ .++++.+. +|..
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence            5899999999999999999998 67886654 5554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PTZ00325 malate dehydrogenase; Provisional

Probab=96.54  E-value=0.0058  Score=43.72  Aligned_cols=36  Identities=14%  Similarity=0.107  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~   40 (91)
                      .+++||.|+|++|.||+.++..|...+  +++.++++.
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~   43 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV   43 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence            345699999999999999999888554  789999983

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.54  E-value=0.012  Score=41.92  Aligned_cols=37  Identities=16%  Similarity=0.168  Sum_probs=33.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++|.|+|.+|.+|..++..|+++|+.|++..|..
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t  193 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS  193 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence            4568999999999999999999999999999997754

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.51  E-value=0.014  Score=47.53  Aligned_cols=64  Identities=11%  Similarity=-0.031  Sum_probs=44.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-Cc-------------EEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HN-------------TFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~-------------V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      .+++|+|+|+ |++|+..++.|.+.. ++             |++.+++.      +.++.+... .++++.+..|+.|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~la~~-~~~~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL------KDAKETVEG-IENAEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH------HHHHHHHHh-cCCCceEEeecCCH
Confidence            3678999998 999999999998753 33             66666643      223222211 12678899999998


Q ss_pred             hhhhHH
Q 037506           72 QVTSSQ   77 (91)
Q Consensus        72 ~~l~~~   77 (91)
                      +.+.+.
T Consensus       640 e~L~~~  645 (1042)
T PLN02819        640 ESLLKY  645 (1042)
T ss_pred             HHHHHh
Confidence            888775

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=96.51  E-value=0.007  Score=37.88  Aligned_cols=31  Identities=26%  Similarity=0.472  Sum_probs=28.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+ |-+|..++.+|.+.|++|+++.|..
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~   31 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP   31 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc
Confidence            688998 8899999999999999999999964

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.51  E-value=0.0089  Score=39.04  Aligned_cols=38  Identities=13%  Similarity=0.169  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ....++|+|+|+++.+|..+++.|.+.|.+|+++.|..
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            45678999999966789999999999999999999864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.51  E-value=0.006  Score=43.09  Aligned_cols=33  Identities=24%  Similarity=0.261  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |-+|..++..|.+.|++|+++.|+.
T Consensus         1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~   33 (326)
T PRK14620          1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNH   33 (326)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCH
Confidence            47999999 9999999999999999999999863

>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]

Probab=96.50  E-value=0.0071  Score=42.92  Aligned_cols=36  Identities=22%  Similarity=0.265  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.++.|+|+|| |.+|...+.+|.++|++|+++.+..
T Consensus         2 ~~~~~vvVIGg-Gi~Gls~A~~La~~G~~V~vie~~~   37 (387)
T COG0665           2 SMKMDVVIIGG-GIVGLSAAYYLAERGADVTVLEAGE   37 (387)
T ss_pred             CCcceEEEECC-cHHHHHHHHHHHHcCCEEEEEecCc
Confidence            34568999996 9999999999999999999998764

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.50  E-value=0.0053  Score=39.26  Aligned_cols=32  Identities=22%  Similarity=0.424  Sum_probs=30.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ||.|+|| |-.|.+++..|..+|++|+++.|+.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~   32 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDE   32 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccH
Confidence            6899999 9999999999999999999999974

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.46  E-value=0.03  Score=39.22  Aligned_cols=37  Identities=19%  Similarity=0.424  Sum_probs=29.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEE-EEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTF-VYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~-~~~R~~~   42 (91)
                      +++||.|.|++|.+|+.+++.+.+.. .++. +++|..+
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            35799999999999999999999765 4544 4667654

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.45  E-value=0.0068  Score=45.48  Aligned_cols=34  Identities=21%  Similarity=0.245  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|.|+|+ |.+|+.++..|++.|++|++++++.
T Consensus         4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~   37 (495)
T PRK07531          4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHP   37 (495)
T ss_pred             cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            468999987 9999999999999999999999864

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.41  E-value=0.007  Score=43.60  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=27.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEec
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYAR   39 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~R   39 (91)
                      ..++|.|.||||++|..+++.|.++.|   ++..+..
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS   39 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS   39 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence            456899999999999999999998654   5555543

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=96.40  E-value=0.012  Score=41.71  Aligned_cols=33  Identities=27%  Similarity=0.455  Sum_probs=30.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||+|.|+ |-+|+.+.-.|.+.|++|+.+.|+.
T Consensus         1 mkI~IlGa-GAvG~l~g~~L~~~g~~V~~~~R~~   33 (307)
T COG1893           1 MKILILGA-GAIGSLLGARLAKAGHDVTLLVRSR   33 (307)
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCCeEEEEecHH
Confidence            68999999 9999999999999999999999974

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.40  E-value=0.0095  Score=39.50  Aligned_cols=36  Identities=19%  Similarity=0.323  Sum_probs=27.8

Q ss_pred             CCCeEEEEc----------------CCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFG----------------GTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItG----------------atG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++||||+                .||..|.+|++.+..+|++|+.+..+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~   53 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS   53 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc
Confidence            457888887                479999999999999999999999874

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1

Probab=96.39  E-value=0.0077  Score=41.69  Aligned_cols=31  Identities=23%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .|+|+|| |.+|..++..|.++|++|+++.+.
T Consensus         1 DvvIIGa-Gi~G~~~A~~La~~G~~V~l~e~~   31 (358)
T PF01266_consen    1 DVVIIGA-GIAGLSTAYELARRGHSVTLLERG   31 (358)
T ss_dssp             EEEEECT-SHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeec
Confidence            3789999 999999999999999999999997

1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.39  E-value=0.01  Score=34.40  Aligned_cols=31  Identities=29%  Similarity=0.572  Sum_probs=26.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC---CcEEEE-ecC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG---HNTFVY-ARP   40 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g---~~V~~~-~R~   40 (91)
                      ||.|+|+ |.+|.++++.|++.|   ++|.+. .|+
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~   35 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRS   35 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCc
Confidence            5788855 999999999999999   999966 675

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=96.38  E-value=0.023  Score=43.65  Aligned_cols=37  Identities=22%  Similarity=0.303  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++++++|.|+|+ |+.|.-++..+.+.|++|.+++.++
T Consensus        19 ~~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~   55 (577)
T PLN02948         19 GVSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLE   55 (577)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            366789999999 8999999999999999999998764

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.37  E-value=0.022  Score=40.97  Aligned_cols=35  Identities=20%  Similarity=0.340  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+|+|+|+|+ |..|..++..+.+.|++|++++.++
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~   45 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYA   45 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            3568999997 8999999999999999999998764

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.35  E-value=0.0073  Score=42.35  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=30.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|.|+|. |.+|..++..|.+.||+|++++|+.
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~   34 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNP   34 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            47999987 9999999999999999999999864

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.30  E-value=0.022  Score=41.61  Aligned_cols=65  Identities=18%  Similarity=0.193  Sum_probs=46.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +++|.|+|| |.+|+-++.+..+-|++|++++-++...   ..     ..   .-.++.++.+|++.+++. ...+++
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~P---A~-----~v---a~~~i~~~~dD~~al~el-a~~~DV   65 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAP---AA-----QV---ADRVIVAAYDDPEALREL-AAKCDV   65 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCc---hh-----hc---ccceeecCCCCHHHHHHH-HhhCCE
Confidence            367999999 9999999999999999999999654321   10     01   125566777777777775 354443

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.29  E-value=0.012  Score=40.92  Aligned_cols=36  Identities=19%  Similarity=0.282  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ...++++|+|+ |.+|++++..|.+.| .+|+++.|+.
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~  157 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV  157 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence            34578999998 999999999999999 7899999974

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.27  E-value=0.01  Score=41.31  Aligned_cols=34  Identities=32%  Similarity=0.379  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +++|.|+|. |.+|+.+++.|.+.|++|++++|+.
T Consensus         2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~   35 (296)
T PRK11559          2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNP   35 (296)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            358999986 9999999999999999999998864

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.27  E-value=0.008  Score=35.91  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ...++|+|+|| |-+|.+=++.|++.|.+|++++..
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~   39 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE   39 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc
Confidence            45689999999 999999999999999999999976

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.26  E-value=0.01  Score=42.28  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=29.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~   40 (91)
                      |||.|+|++|.+|++++-.|...+  .++.+++.+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~   35 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV   35 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC
Confidence            589999999999999999988877  578888876

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05868 hypothetical protein; Validated

Probab=96.25  E-value=0.011  Score=42.41  Aligned_cols=35  Identities=11%  Similarity=0.006  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |++|+|+|| |-.|..++..|.+.|++|+++.+.+.
T Consensus         1 ~~~V~IvGg-G~aGl~~A~~L~~~G~~v~viE~~~~   35 (372)
T PRK05868          1 MKTVVVSGA-SVAGTAAAYWLGRHGYSVTMVERHPG   35 (372)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Confidence            468999999 99999999999999999999998754

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.24  E-value=0.037  Score=38.28  Aligned_cols=33  Identities=21%  Similarity=0.414  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +++|+|+|||+ =|+.+++.|.+.|++|++.+-.
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat   34 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAG   34 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEcc
Confidence            56899999987 8999999999999988877644

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.23  E-value=0.011  Score=40.54  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|..++..|.+.+   ++|.+++|+.
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~   38 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSP   38 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence            468999997 999999999999998   7899999864

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.23  E-value=0.0094  Score=42.88  Aligned_cols=36  Identities=25%  Similarity=0.314  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ....+|+|+|+ |.+|++++..|...|. ++++++++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            45678999999 9999999999999996 889988863

>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways

Probab=96.22  E-value=0.014  Score=40.37  Aligned_cols=34  Identities=21%  Similarity=0.204  Sum_probs=29.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      .|+|+|| |..|..++..|.++|++|+++.|.+..
T Consensus         3 dV~IvGa-G~aGl~~A~~L~~~G~~v~i~E~~~~~   36 (356)
T PF01494_consen    3 DVAIVGA-GPAGLAAALALARAGIDVTIIERRPDP   36 (356)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTCEEEEEESSSSC
T ss_pred             eEEEECC-CHHHHHHHHHHHhcccccccchhcccc
Confidence            6899999 999999999999999999999997654

In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.026  Score=40.06  Aligned_cols=37  Identities=14%  Similarity=0.248  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RP   40 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~   40 (91)
                      ....++|+|+|.++.+|..++..|+++|+.|++.. |.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence            35678999999999999999999999999999995 54

>PRK08163 salicylate hydroxylase; Provisional

Probab=96.19  E-value=0.014  Score=41.75  Aligned_cols=36  Identities=22%  Similarity=0.229  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ++++|+|+|| |-.|..++..|.+.|++|+++.|...
T Consensus         3 ~~~~V~IvGa-GiaGl~~A~~L~~~g~~v~v~Er~~~   38 (396)
T PRK08163          3 KVTPVLIVGG-GIGGLAAALALARQGIKVKLLEQAAE   38 (396)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHhCCCcEEEEeeCcc
Confidence            4568999999 99999999999999999999998753

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.14  E-value=0.011  Score=43.27  Aligned_cols=32  Identities=22%  Similarity=0.151  Sum_probs=27.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |++|..++..| +.||+|++++++.
T Consensus         1 mkI~VIGl-GyvGl~~A~~l-A~G~~VigvD~d~   32 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLI-AQNHEVVALDILP   32 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHH-HhCCcEEEEECCH
Confidence            47999977 99999999554 5699999999975

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.14  E-value=0.013  Score=41.85  Aligned_cols=34  Identities=21%  Similarity=0.270  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      +.+|.|.|||||+|..|++.|.++.+ ++..+...
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~   36 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA   36 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence            56899999999999999999988763 55555543

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.14  E-value=0.033  Score=39.86  Aligned_cols=32  Identities=25%  Similarity=0.372  Sum_probs=29.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ||+|+|+ |..|..+++.+.+.|++|++++.++
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~   32 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYA   32 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            5899997 9999999999999999999998865

This enzyme is an alternative to PurN (TIGR00639)

>PRK06753 hypothetical protein; Provisional

Probab=96.13  E-value=0.014  Score=41.43  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=31.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |+|+|+|| |-.|..++..|.+.|++|+++.|.+.
T Consensus         1 ~~V~IvGg-G~aGl~~A~~L~~~g~~v~v~E~~~~   34 (373)
T PRK06753          1 MKIAIIGA-GIGGLTAAALLQEQGHEVKVFEKNES   34 (373)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCc
Confidence            57999999 99999999999999999999998764

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.13  E-value=0.016  Score=40.58  Aligned_cols=34  Identities=15%  Similarity=0.226  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ++||.|+|+ |.+|+.++..+...+. +|.+++++.
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~   36 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVE   36 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCC
Confidence            479999999 9999999999988775 899999864

>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364

Probab=96.13  E-value=0.012  Score=41.65  Aligned_cols=32  Identities=28%  Similarity=0.363  Sum_probs=29.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .|+|+|| |.+|.+++.+|.++|++|+++.+..
T Consensus         2 dv~IIG~-Gi~G~s~A~~L~~~G~~V~vle~~~   33 (365)
T TIGR03364         2 DLIIVGA-GILGLAHAYAAARRGLSVTVIERSS   33 (365)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            4899999 9999999999999999999999864

This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.12  E-value=0.013  Score=41.14  Aligned_cols=33  Identities=21%  Similarity=0.344  Sum_probs=30.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |.+|..+++.|.+.|++|.+++|+.
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~   33 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQ   33 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCH
Confidence            47999997 9999999999999999999999874

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric

Probab=96.10  E-value=0.03  Score=41.42  Aligned_cols=34  Identities=15%  Similarity=0.262  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|+|+|| |++|.-+++.|.+.|.+|+++.|..
T Consensus       272 gk~VvVIGg-G~~a~d~A~~l~~~G~~Vtlv~~~~  305 (449)
T TIGR01316       272 GKSVVVIGG-GNTAVDSARTALRLGAEVHCLYRRT  305 (449)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCEEEEEeecC
Confidence            478999999 9999999999999999999999864

This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.

>PTZ00318 NADH dehydrogenase-like protein; Provisional

Probab=96.09  E-value=0.012  Score=43.04  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +++++|+|+|| ||-|..+++.|...+++|+++++.+.
T Consensus         8 ~~~~~vVIvGg-G~aGl~~a~~L~~~~~~ItlI~~~~~   44 (424)
T PTZ00318          8 LKKPNVVVLGT-GWAGAYFVRNLDPKKYNITVISPRNH   44 (424)
T ss_pred             CCCCeEEEECC-CHHHHHHHHHhCcCCCeEEEEcCCCC
Confidence            45678999999 99999999999777789999987653

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.09  E-value=0.01  Score=39.67  Aligned_cols=35  Identities=17%  Similarity=0.124  Sum_probs=30.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ....+|+|.|+ |.+|+.++..|.+.|. ++++++++
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45678999999 7799999999999997 68888877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.08  E-value=0.017  Score=40.62  Aligned_cols=35  Identities=23%  Similarity=0.272  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .++|+|.| .|.||+++++.|.++|+.|.++.++.+
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~   37 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRS   37 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCc
Confidence            45677766 699999999999999999988887654

>PLN02712 arogenate dehydrogenase

Probab=96.07  E-value=0.016  Score=45.16  Aligned_cols=35  Identities=31%  Similarity=0.536  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .++++|.|+|. |.+|.+++..|.+.|++|++++|+
T Consensus        50 ~~~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~   84 (667)
T PLN02712         50 TTQLKIAIIGF-GNYGQFLAKTLISQGHTVLAHSRS   84 (667)
T ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45679999995 999999999999999999999886

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.04  E-value=0.015  Score=40.79  Aligned_cols=33  Identities=24%  Similarity=0.367  Sum_probs=30.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |.+|+.+++.|++.|++|++++|+.
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~   33 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNP   33 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCH
Confidence            47999986 9999999999999999999999864

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.03  E-value=0.0062  Score=38.14  Aligned_cols=33  Identities=24%  Similarity=0.350  Sum_probs=27.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~   38 (91)
                      ...++|-|+|+ |.+|.+|.+.|.+.||+|..+.
T Consensus         8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~   40 (127)
T PF10727_consen    8 AARLKIGIIGA-GRVGTALARALARAGHEVVGVY   40 (127)
T ss_dssp             ----EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence            45679999999 9999999999999999998875

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.03  E-value=0.013  Score=42.12  Aligned_cols=37  Identities=30%  Similarity=0.328  Sum_probs=31.6

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      +.+.++|+|+|+ |-+|+++++.|...|. ++++++++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            345678999998 7799999999999996 888888864

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.01  E-value=0.02  Score=40.30  Aligned_cols=35  Identities=23%  Similarity=0.328  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++++|+|. |.+|+.+++.|...|.+|++++|+.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~  184 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSS  184 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            4578999999 8899999999999999999999864

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.01  E-value=0.018  Score=39.84  Aligned_cols=34  Identities=21%  Similarity=0.328  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++++|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~  150 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV  150 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            568999999 8899999999999999999998864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=95.99  E-value=0.023  Score=40.69  Aligned_cols=33  Identities=12%  Similarity=0.211  Sum_probs=27.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~   41 (91)
                      +|.|+|++|.+|++++..|...+       +++.+++++.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~   40 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPP   40 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCC
Confidence            58999999999999999998744       3688898854

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01377 soxA_mon sarcosine oxidase, monomeric form

Probab=95.98  E-value=0.014  Score=41.49  Aligned_cols=31  Identities=16%  Similarity=0.387  Sum_probs=28.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .|+|+|| |.+|.+++.+|.++|++|+++.+.
T Consensus         2 dvvIIGa-Gi~G~s~A~~La~~g~~V~l~e~~   32 (380)
T TIGR01377         2 DVIVVGA-GIMGCFAAYHLAKHGKKTLLLEQF   32 (380)
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            4899998 999999999999999999999985

Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.98  E-value=0.012  Score=40.91  Aligned_cols=32  Identities=22%  Similarity=0.145  Sum_probs=28.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|.|+|. |.+|+.++..|.+.|++|++++|+.
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~   32 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGP   32 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            4788886 9999999999999999999999874

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.98  E-value=0.021  Score=39.41  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+++|+||+|.+|..+++.+...|.+|++++++.
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~  197 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP  197 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence            45899999999999999999999999999988753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.97  E-value=0.033  Score=39.39  Aligned_cols=66  Identities=17%  Similarity=0.228  Sum_probs=47.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-----c-----CCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-----Q-----GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-----~-----~~~v~~v~gDl~d~~~l~~~   77 (91)
                      ++|.++|- |-.|..++..|+++||+|++++|++.+.     .+.+...     .     ....+++..-+.|.+.+++.
T Consensus         1 ~kIafIGL-G~MG~pmA~~L~~aG~~v~v~~r~~~ka-----~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V   74 (286)
T COG2084           1 MKIAFIGL-GIMGSPMAANLLKAGHEVTVYNRTPEKA-----AELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAV   74 (286)
T ss_pred             CeEEEEcC-chhhHHHHHHHHHCCCEEEEEeCChhhh-----hHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHH
Confidence            46888887 9999999999999999999999986431     1111110     0     01356777778888888887


Q ss_pred             Hh
Q 037506           78 RM   79 (91)
Q Consensus        78 ~~   79 (91)
                      +.
T Consensus        75 ~~   76 (286)
T COG2084          75 LF   76 (286)
T ss_pred             Hh
Confidence            53

>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated

Probab=95.90  E-value=0.017  Score=41.20  Aligned_cols=35  Identities=20%  Similarity=0.230  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC---CCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS---GHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~---g~~V~~~~R~   40 (91)
                      |.+..|+|+|| |-.|..++-.|.++   |++|+++.|.
T Consensus         1 m~~~dv~IvGa-G~aGl~~A~~L~~~~~~G~~v~v~E~~   38 (395)
T PRK05732          1 MSRMDVIIVGG-GMAGATLALALSRLSHGGLPVALIEAF   38 (395)
T ss_pred             CCcCCEEEECc-CHHHHHHHHHhhhcccCCCEEEEEeCC
Confidence            45568999999 99999999999988   9999999984

>PRK06847 hypothetical protein; Provisional

Probab=95.89  E-value=0.024  Score=40.20  Aligned_cols=35  Identities=26%  Similarity=0.158  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +++|+|+|| |..|..++..|.+.|++|+++.|...
T Consensus         4 ~~~V~IVGa-G~aGl~~A~~L~~~g~~v~v~E~~~~   38 (375)
T PRK06847          4 VKKVLIVGG-GIGGLSAAIALRRAGIAVDLVEIDPE   38 (375)
T ss_pred             cceEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            457999999 99999999999999999999998653

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.89  E-value=0.029  Score=36.53  Aligned_cols=37  Identities=19%  Similarity=0.217  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...++|.|+|- |-||+.+++.|..-|.+|++++|...
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~   70 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPK   70 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCH
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCC
Confidence            34678999988 99999999999999999999999753

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=95.84  E-value=0.019  Score=40.34  Aligned_cols=33  Identities=24%  Similarity=0.203  Sum_probs=29.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |.+|..+++.|++.||+|++++|.+
T Consensus         1 m~Ig~IGl-G~MG~~ma~~L~~~G~~v~v~~~~~   33 (292)
T PRK15059          1 MKLGFIGL-GIMGTPMAINLARAGHQLHVTTIGP   33 (292)
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            36899986 9999999999999999999998864

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=95.82  E-value=0.051  Score=38.77  Aligned_cols=57  Identities=18%  Similarity=0.197  Sum_probs=40.5

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +|.|+|+ |.+|..++..+.+.|++|++++.++..   |.     ..+.   -+.+.+++.|.+.+.+.
T Consensus         1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~---p~-----~~~a---d~~~~~~~~d~~~i~~~   57 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANS---PA-----VQVA---DHVVLAPFFDPAAIREL   57 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCC---Ch-----hHhC---ceeEeCCCCCHHHHHHH
Confidence            4889999 899999999999999999999876422   11     0111   13446677777766664

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional

Probab=95.82  E-value=0.023  Score=40.63  Aligned_cols=35  Identities=20%  Similarity=0.219  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...|+|+|| |-.|..++..|.+.|++|+++.+.+.
T Consensus         7 ~~dViIVGa-G~~Gl~~A~~L~~~G~~v~liE~~~~   41 (388)
T PRK07494          7 HTDIAVIGG-GPAGLAAAIALARAGASVALVAPEPP   41 (388)
T ss_pred             CCCEEEECc-CHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence            346999999 99999999999999999999998753

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=95.82  E-value=0.023  Score=41.94  Aligned_cols=34  Identities=21%  Similarity=0.272  Sum_probs=30.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |||.|+|. ||+|....--|.+.||+|++++.+.+
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~   34 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDES   34 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHH
Confidence            68999987 99999999999999999999998653

>PLN02712 arogenate dehydrogenase

Probab=95.81  E-value=0.022  Score=44.40  Aligned_cols=35  Identities=34%  Similarity=0.634  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+++|.|+| .|.+|.++++.|.+.|++|++++|+.
T Consensus       368 ~~~kIgIIG-lG~mG~slA~~L~~~G~~V~~~dr~~  402 (667)
T PLN02712        368 SKLKIAIVG-FGNFGQFLAKTMVKQGHTVLAYSRSD  402 (667)
T ss_pred             CCCEEEEEe-cCHHHHHHHHHHHHCcCEEEEEECCh
Confidence            567999999 59999999999999999999999863

>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed

Probab=95.79  E-value=0.018  Score=44.45  Aligned_cols=33  Identities=24%  Similarity=0.369  Sum_probs=30.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..|+|+|| |.+|..++.+|.++|++|+++++..
T Consensus       261 ~dVvIIGa-GIaG~s~A~~La~~G~~V~VlE~~~  293 (662)
T PRK01747        261 RDAAIIGG-GIAGAALALALARRGWQVTLYEADE  293 (662)
T ss_pred             CCEEEECc-cHHHHHHHHHHHHCCCeEEEEecCC
Confidence            47999999 9999999999999999999999863

>PRK09126 hypothetical protein; Provisional

Probab=95.79  E-value=0.023  Score=40.58  Aligned_cols=35  Identities=17%  Similarity=0.271  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...|+|+|| |-.|..++..|.+.|++|+++.|.+.
T Consensus         3 ~~dviIvGg-G~aGl~~A~~L~~~G~~v~v~E~~~~   37 (392)
T PRK09126          3 HSDIVVVGA-GPAGLSFARSLAGSGLKVTLIERQPL   37 (392)
T ss_pred             cccEEEECc-CHHHHHHHHHHHhCCCcEEEEeCCCc
Confidence            457999999 99999999999999999999998653

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.79  E-value=0.046  Score=31.44  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=29.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEec
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYAR   39 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R   39 (91)
                      ...++++|.|. |.+|..+++.|.+. +.+|.+++|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            45678999999 99999999999998 578888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.78  E-value=0.091  Score=38.06  Aligned_cols=64  Identities=19%  Similarity=0.192  Sum_probs=46.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      ...+++.|+|+.| +|+-=++...+-|++|+++++..+     .+.+...   ..+.+++..-..|++.+.+.
T Consensus       180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~-----kkeea~~---~LGAd~fv~~~~d~d~~~~~  243 (360)
T KOG0023|consen  180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSK-----KKEEAIK---SLGADVFVDSTEDPDIMKAI  243 (360)
T ss_pred             CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCch-----hHHHHHH---hcCcceeEEecCCHHHHHHH
Confidence            3567899999988 999888888889999999999752     2343333   33666665555577766664

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.77  E-value=0.023  Score=39.83  Aligned_cols=33  Identities=24%  Similarity=0.271  Sum_probs=29.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |.+|..+++.|.+.|++|++++|+.
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~   33 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQ   33 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCH
Confidence            47899986 9999999999999999999999864

>PRK08013 oxidoreductase; Provisional

Probab=95.75  E-value=0.024  Score=41.00  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...|+|+|| |-.|..++-.|.+.|++|+++.|.+.
T Consensus         3 ~~dV~IvGa-GpaGl~~A~~La~~G~~v~viE~~~~   37 (400)
T PRK08013          3 SVDVVIAGG-GMVGLAVACGLQGSGLRVAVLEQRVP   37 (400)
T ss_pred             cCCEEEECc-CHHHHHHHHHHhhCCCEEEEEeCCCC
Confidence            357999999 99999999999999999999998654

>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated

Probab=95.75  E-value=0.028  Score=40.29  Aligned_cols=39  Identities=21%  Similarity=0.332  Sum_probs=32.8

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |..++ +..|+|+|| |-.|..++-.|.++|++|+++.|.+
T Consensus         1 ~~~~~-~~dV~IvGa-G~aGl~~A~~La~~G~~v~liE~~~   39 (392)
T PRK08773          1 MSRRS-RRDAVIVGG-GVVGAACALALADAGLSVALVEGRE   39 (392)
T ss_pred             CCCCC-CCCEEEECc-CHHHHHHHHHHhcCCCEEEEEeCCC
Confidence            44433 347999999 9999999999999999999999864

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.74  E-value=0.028  Score=38.80  Aligned_cols=32  Identities=16%  Similarity=0.258  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEe
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYA   38 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~   38 (91)
                      +++|.|+|++|.+|+.+++.+.+. +.++.++.
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~   33 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAV   33 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            368999999999999999988864 57877754

>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []

Probab=95.73  E-value=0.022  Score=43.25  Aligned_cols=35  Identities=14%  Similarity=0.238  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .++|+|+|| |.-|..-++.|++.|++++++.|...
T Consensus         1 ~krVaVIGa-G~sGL~a~k~l~e~g~~~~~fE~~~~   35 (531)
T PF00743_consen    1 AKRVAVIGA-GPSGLAAAKNLLEEGLEVTCFEKSDD   35 (531)
T ss_dssp             --EEEEE---SHHHHHHHHHHHHTT-EEEEEESSSS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCCeEEecCCC
Confidence            378999999 99999999999999999999998753

Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....

>cd00704 MDH Malate dehydrogenase

Probab=95.72  E-value=0.023  Score=40.66  Aligned_cols=33  Identities=21%  Similarity=0.225  Sum_probs=28.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~   41 (91)
                      ||.|+||+|++|++++..|...+       +++.+++++.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            79999999999999999888755       2588888864

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.71  E-value=0.026  Score=39.90  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=29.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|+.++..|...|  ++|.+++++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~   35 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINK   35 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCc
Confidence            47999999 999999999999988  6899999875

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.70  E-value=0.035  Score=40.25  Aligned_cols=32  Identities=16%  Similarity=0.262  Sum_probs=26.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHh-CCCc---EEEEe
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVS-SGHN---TFVYA   38 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~-~g~~---V~~~~   38 (91)
                      .++|.|.||||++|+.+++.|.+ ..++   +..+.
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~a   40 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLS   40 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEE
Confidence            46899999999999999999985 5666   55554

>PRK13512 coenzyme A disulfide reductase; Provisional

Probab=95.70  E-value=0.025  Score=41.55  Aligned_cols=34  Identities=12%  Similarity=0.174  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~   41 (91)
                      ||+|+|+|| |+-|...++.|.+.  +++|+++++..
T Consensus         1 m~~VVIIGg-G~aG~~aA~~l~~~~~~~~I~li~~~~   36 (438)
T PRK13512          1 MPKIIVVGA-VAGGATCASQIRRLDKESDIIIFEKDR   36 (438)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence            468999999 99999999999875  58999999864

>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed

Probab=95.70  E-value=0.027  Score=42.03  Aligned_cols=34  Identities=15%  Similarity=0.119  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +++|+|+|| |.+|...+..|.+.|++|+++.+.+
T Consensus         2 ~~dVvVIGG-GlAGleAAlaLAr~Gl~V~LiE~rp   35 (436)
T PRK05335          2 MKPVNVIGA-GLAGSEAAWQLAKRGVPVELYEMRP   35 (436)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCcEEEEEccC
Confidence            457999999 9999999999999999999998643

>PLN02172 flavin-containing monooxygenase FMO GS-OX

Probab=95.69  E-value=0.027  Score=42.03  Aligned_cols=36  Identities=19%  Similarity=0.328  Sum_probs=32.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++.++|+|+|| |.-|...+.+|.+.|++|+++.+..
T Consensus         8 ~~~~~VaIIGA-G~aGL~aA~~l~~~G~~v~vfE~~~   43 (461)
T PLN02172          8 INSQHVAVIGA-GAAGLVAARELRREGHTVVVFEREK   43 (461)
T ss_pred             CCCCCEEEECC-cHHHHHHHHHHHhcCCeEEEEecCC
Confidence            34678999999 9999999999999999999999865

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.68  E-value=0.017  Score=38.49  Aligned_cols=36  Identities=25%  Similarity=0.333  Sum_probs=30.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      .+..+|+|+|+.| +|+.+++.|...| .++++++.+.
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            4567899999966 9999999999999 5688887653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.68  E-value=0.054  Score=40.11  Aligned_cols=34  Identities=18%  Similarity=0.207  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|+|+|. |..|..+++.|.+.|++|++.++..
T Consensus        14 ~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~   47 (458)
T PRK01710         14 NKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKS   47 (458)
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            468999988 8899999999999999999999764

>PRK12770 putative glutamate synthase subunit beta; Provisional

Probab=95.67  E-value=0.034  Score=39.65  Aligned_cols=35  Identities=23%  Similarity=0.211  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .++|+|+|| |+.|...+..|.+.|++|+++.+...
T Consensus        18 ~~~VvIIG~-G~aGl~aA~~l~~~g~~v~lie~~~~   52 (352)
T PRK12770         18 GKKVAIIGA-GPAGLAAAGYLACLGYEVHVYDKLPE   52 (352)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            468999999 89999999999999999999998653

>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional

Probab=95.67  E-value=0.029  Score=40.27  Aligned_cols=33  Identities=18%  Similarity=0.226  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..|+|+|| |-.|..++-.|.+.|++|+++.+.+
T Consensus         4 ~dv~IvGg-G~aGl~~A~~L~~~G~~v~l~E~~~   36 (384)
T PRK08849          4 YDIAVVGG-GMVGAATALGFAKQGRSVAVIEGGE   36 (384)
T ss_pred             ccEEEECc-CHHHHHHHHHHHhCCCcEEEEcCCC
Confidence            47999999 9999999999999999999999753

>PRK12831 putative oxidoreductase; Provisional

Probab=95.66  E-value=0.063  Score=39.96  Aligned_cols=35  Identities=17%  Similarity=0.295  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|| |++|.-+++.|.+.|.+|+++.|..
T Consensus       280 ~gk~VvVIGg-G~va~d~A~~l~r~Ga~Vtlv~r~~  314 (464)
T PRK12831        280 VGKKVAVVGG-GNVAMDAARTALRLGAEVHIVYRRS  314 (464)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHcCCEEEEEeecC
Confidence            3479999999 9999999999999999999999854

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.66  E-value=0.026  Score=42.82  Aligned_cols=36  Identities=17%  Similarity=0.224  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +..++++|+|+ |.+|++++..|.+.|++|+++.|+.
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~  412 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY  412 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            34578999999 7899999999999999999988863

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.64  E-value=0.032  Score=39.98  Aligned_cols=35  Identities=20%  Similarity=0.203  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|.|+|. |.||+.+++.|...|++|++++|..
T Consensus       145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~  179 (330)
T PRK12480        145 KNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYP  179 (330)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCh
Confidence            4578999988 9999999999999999999999864

>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated

Probab=95.64  E-value=0.033  Score=40.12  Aligned_cols=35  Identities=23%  Similarity=0.261  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...|+|+|| |-.|..++..|.+.|++|+++.|.+.
T Consensus        18 ~~dV~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~   52 (415)
T PRK07364         18 TYDVAIVGG-GIVGLTLAAALKDSGLRIALIEAQPA   52 (415)
T ss_pred             ccCEEEECc-CHHHHHHHHHHhcCCCEEEEEecCCc
Confidence            357999999 99999999999999999999998654

>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric

Probab=95.64  E-value=0.035  Score=41.07  Aligned_cols=35  Identities=23%  Similarity=0.306  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|| |+.|...+..|.+.|++|+++.+..
T Consensus       132 ~~~~V~IIG~-G~aGl~aA~~l~~~G~~V~vie~~~  166 (449)
T TIGR01316       132 THKKVAVIGA-GPAGLACASELAKAGHSVTVFEALH  166 (449)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4568999999 9999999999999999999999854

This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.64  E-value=0.035  Score=39.51  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~   42 (91)
                      ..+||.|+|+ |.+|+.++-.|...+.  ++.+++++..
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~   42 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKE   42 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence            4469999998 9999999999998885  7999998643

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.63  E-value=0.039  Score=40.53  Aligned_cols=35  Identities=23%  Similarity=0.255  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|. |-+|.++++.|.++|++|++.+...
T Consensus         4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~   38 (445)
T PRK04308          4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAEL   38 (445)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4578999998 6799999999999999999998754

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.63  E-value=0.02  Score=41.50  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=27.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R   39 (91)
                      ++||.|.|||||.|..|++.|..+. .++..++.
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss   35 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISS   35 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeec
Confidence            5799999999999999999999875 56665553

>PRK07208 hypothetical protein; Provisional

Probab=95.61  E-value=0.033  Score=41.04  Aligned_cols=36  Identities=19%  Similarity=0.181  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |.+++|+|+|| |+-|...+..|.++|++|+++.+..
T Consensus         2 ~~~~~vvIiGa-GisGL~aA~~L~~~g~~v~v~E~~~   37 (479)
T PRK07208          2 TNKKSVVIIGA-GPAGLTAAYELLKRGYPVTVLEADP   37 (479)
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            55678999999 9999999999999999999998654

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=95.61  E-value=0.03  Score=42.33  Aligned_cols=35  Identities=20%  Similarity=0.429  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.++|.|+|+ |.+|+.++..|+..||+|++++|+.
T Consensus         4 ~~~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~   38 (503)
T TIGR02279         4 NVVTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRA   38 (503)
T ss_pred             CccEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            4568999999 9999999999999999999999874

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.58  E-value=0.031  Score=39.20  Aligned_cols=34  Identities=18%  Similarity=0.220  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      .++|.|+|+ |.+|..++..|.+.|+  +|++++|+.
T Consensus         6 ~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~   41 (307)
T PRK07502          6 FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSA   41 (307)
T ss_pred             CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCH
Confidence            468999985 9999999999999885  899998864

>PRK11728 hydroxyglutarate oxidase; Provisional

Probab=95.58  E-value=0.029  Score=40.41  Aligned_cols=33  Identities=21%  Similarity=0.269  Sum_probs=30.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~   41 (91)
                      ..|+|+|| |-+|..++.+|.++  |++|+++.|..
T Consensus         3 ~dVvIIGg-Gi~G~s~A~~La~~~~g~~V~llE~~~   37 (393)
T PRK11728          3 YDFVIIGG-GIVGLSTAMQLQERYPGARIAVLEKES   37 (393)
T ss_pred             ccEEEECC-cHHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            46999999 99999999999998  99999999864

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.57  E-value=0.027  Score=40.15  Aligned_cols=33  Identities=15%  Similarity=0.135  Sum_probs=28.5

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      ||.|+|++|.+|++++-.|...+.  ++.+++++.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~   35 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG   35 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence            589999999999999999888774  788888765

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK07538 hypothetical protein; Provisional

Probab=95.56  E-value=0.031  Score=40.55  Aligned_cols=34  Identities=26%  Similarity=0.306  Sum_probs=30.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |+|+|+|| |-.|..++..|.++|++|+++.|.+.
T Consensus         1 ~dV~IVGa-G~aGl~~A~~L~~~G~~v~v~E~~~~   34 (413)
T PRK07538          1 MKVLIAGG-GIGGLTLALTLHQRGIEVVVFEAAPE   34 (413)
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCcEEEEEcCCc
Confidence            57999999 99999999999999999999998653

>PRK06126 hypothetical protein; Provisional

Probab=95.56  E-value=0.039  Score=41.47  Aligned_cols=37  Identities=22%  Similarity=0.314  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +...+|+|+|| |-.|..++-.|.++|++|+++.|...
T Consensus         5 ~~~~~VlIVGa-GpaGL~~Al~La~~G~~v~viEr~~~   41 (545)
T PRK06126          5 TSETPVLIVGG-GPVGLALALDLGRRGVDSILVERKDG   41 (545)
T ss_pred             CccCCEEEECC-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            34568999999 99999999999999999999998753

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=95.56  E-value=0.039  Score=41.71  Aligned_cols=35  Identities=17%  Similarity=0.426  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .++|.|+|+ |.+|+.++..|+..||+|++++|+..
T Consensus         7 i~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e   41 (507)
T PRK08268          7 IATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAG   41 (507)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            468999999 99999999999999999999998753

>PRK06184 hypothetical protein; Provisional

Probab=95.54  E-value=0.038  Score=41.16  Aligned_cols=37  Identities=19%  Similarity=0.189  Sum_probs=32.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |++..|+|+|| |-.|..++-.|.++|++|+++.|.+.
T Consensus         1 ~~~~dVlIVGa-GpaGl~~A~~La~~Gi~v~viE~~~~   37 (502)
T PRK06184          1 YTTTDVLIVGA-GPTGLTLAIELARRGVSFRLIEKAPE   37 (502)
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            34567999999 99999999999999999999998654

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.52  E-value=0.032  Score=33.89  Aligned_cols=32  Identities=25%  Similarity=0.458  Sum_probs=27.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHh-CCCcEEEE-ecC
Q 037506            9 KKLIFGGTGYLGKYMVKASVS-SGHNTFVY-ARP   40 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~-~g~~V~~~-~R~   40 (91)
                      +|.|+|++|.+|..+++.|.+ .++++.++ .|+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~   34 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA   34 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEech
Confidence            588999999999999999998 47888887 443

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.51  E-value=0.089  Score=38.24  Aligned_cols=36  Identities=19%  Similarity=0.276  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ....+|+|+|+ |-+|...++.+...|.+|++++|+.
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~  200 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINI  200 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCH
Confidence            34567999988 9999999999999999999999863

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.50  E-value=0.037  Score=39.55  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-------cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-------NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~   41 (91)
                      .+||.|+|++|++|++++..|+..+.       ++.+++...
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   43 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQ   43 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCC
Confidence            46899999999999999999998774       788888743

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06545 prephenate dehydrogenase; Validated

Probab=95.50  E-value=0.031  Score=40.25  Aligned_cols=34  Identities=24%  Similarity=0.369  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ++|.|+|. |.+|.+++..|.+.|++|.+++++..
T Consensus         1 ~~I~iIG~-GliG~siA~~L~~~G~~v~i~~~~~~   34 (359)
T PRK06545          1 RTVLIVGL-GLIGGSLALAIKAAGPDVFIIGYDPS   34 (359)
T ss_pred             CeEEEEEe-CHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence            36889977 99999999999999999999988653

>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated

Probab=95.49  E-value=0.03  Score=40.44  Aligned_cols=35  Identities=23%  Similarity=0.221  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      |....|+|.|| |-.|..++-.|.+.|++|+++.+.
T Consensus         2 m~~~dV~IvGa-G~~Gl~~A~~L~~~G~~v~viE~~   36 (405)
T PRK08850          2 MQSVDVAIIGG-GMVGLALAAALKESDLRIAVIEGQ   36 (405)
T ss_pred             CCcCCEEEECc-cHHHHHHHHHHHhCCCEEEEEcCC
Confidence            34457999999 999999999999999999999985

>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional

Probab=95.48  E-value=0.032  Score=41.17  Aligned_cols=35  Identities=17%  Similarity=0.218  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|| |+.|...+..|.+.|++|+++.+..
T Consensus       139 ~~~~VvIIGg-GpaGl~aA~~l~~~g~~V~lie~~~  173 (457)
T PRK11749        139 TGKKVAVIGA-GPAGLTAAHRLARKGYDVTIFEARD  173 (457)
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEccCC
Confidence            3468999999 9999999999999999999998764

>PRK07588 hypothetical protein; Provisional

Probab=95.48  E-value=0.037  Score=39.72  Aligned_cols=34  Identities=24%  Similarity=0.214  Sum_probs=30.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ++|+|+|| |-.|..++..|.++|++|+++.|.+.
T Consensus         1 ~~V~IVGg-G~aGl~~A~~L~~~G~~v~v~E~~~~   34 (391)
T PRK07588          1 MKVAISGA-GIAGPTLAYWLRRYGHEPTLIERAPE   34 (391)
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCceEEEeCCCC
Confidence            47999999 99999999999999999999998653

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.47  E-value=0.04  Score=40.60  Aligned_cols=37  Identities=22%  Similarity=0.389  Sum_probs=32.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ....++|+|+|+ |-+|..+++.|.+.| .+|++++|+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~  214 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTY  214 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence            345679999998 999999999999999 7899999864

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.47  E-value=0.037  Score=39.02  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=30.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~   42 (91)
                      ++|.|+|+ |.+|+.++..|+..|  +++.+++|+..
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~   36 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEE   36 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc
Confidence            47999997 999999999999998  68999999753

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.47  E-value=0.036  Score=34.37  Aligned_cols=34  Identities=24%  Similarity=0.348  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      .++|+|.|+ |-+|+.+++.|...|. ++++++.+.
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDI   36 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcc
Confidence            468999999 8899999999999995 788887643

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.46  E-value=0.041  Score=38.74  Aligned_cols=36  Identities=14%  Similarity=0.199  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ...++++|+|++|.+|+.++..|++.|..|++..|.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            356789999999999999999999999999888874

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.44  E-value=0.033  Score=37.09  Aligned_cols=37  Identities=19%  Similarity=0.206  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      +....+|+|+|+ |-+|+.+++.|...|. ++++++++.
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~   55 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDH   55 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence            355678999998 8899999999999995 888888763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]

Probab=95.43  E-value=0.033  Score=40.16  Aligned_cols=33  Identities=21%  Similarity=0.237  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .+.|+|+|| |..|..++-.|.++|++|+++.|.
T Consensus         2 ~~dV~IvGa-G~aGl~lA~~L~~~G~~V~l~E~~   34 (387)
T COG0654           2 MLDVAIVGA-GPAGLALALALARAGLDVTLLERA   34 (387)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHhCCCcEEEEccC
Confidence            357999999 999999999999999999999987

>PRK05442 malate dehydrogenase; Provisional

Probab=95.43  E-value=0.041  Score=39.48  Aligned_cols=36  Identities=14%  Similarity=0.148  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-------cEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-------NTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~   41 (91)
                      +++||.|+|++|.+|++++..|+..+.       ++.+++.+.
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~   45 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPP   45 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCC
Confidence            456999999999999999998887662       788888753

>PLN02688 pyrroline-5-carboxylate reductase

Probab=95.42  E-value=0.036  Score=37.90  Aligned_cols=32  Identities=16%  Similarity=0.179  Sum_probs=27.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC----cEEEE-ecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH----NTFVY-ARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~----~V~~~-~R~   40 (91)
                      |+|.|+|. |-+|..+++.|++.|+    +|+++ +|+
T Consensus         1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~   37 (266)
T PLN02688          1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSN   37 (266)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCC
Confidence            57999985 9999999999999998    88888 664

>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated

Probab=95.42  E-value=0.035  Score=45.20  Aligned_cols=35  Identities=26%  Similarity=0.173  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .+.++|+|+|| |.-|...+..|...||+|+++++.
T Consensus       381 ~tgKKVaVVGa-GPAGLsAA~~La~~Gh~Vtv~E~~  415 (1028)
T PRK06567        381 PTNYNILVTGL-GPAGFSLSYYLLRSGHNVTAIDGL  415 (1028)
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhCCCeEEEEccc
Confidence            35679999999 999999999999999999999974

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.41  E-value=0.041  Score=38.26  Aligned_cols=33  Identities=12%  Similarity=0.233  Sum_probs=29.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~   41 (91)
                      ++|.|+|+ |-+|..++..|.+.+    ++|++++|+.
T Consensus         2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~   38 (277)
T PRK06928          2 EKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSK   38 (277)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCc
Confidence            57999986 999999999999988    7899998853

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.41  E-value=0.029  Score=40.99  Aligned_cols=33  Identities=15%  Similarity=0.316  Sum_probs=25.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHh-CCCc---EEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVS-SGHN---TFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~-~g~~---V~~~~R~   40 (91)
                      ++|.|.||||++|+.+++.+++ ..++   ++.+...
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~   38 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS   38 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence            6899999999999999996665 4565   5665543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=95.41  E-value=0.028  Score=40.80  Aligned_cols=34  Identities=24%  Similarity=0.412  Sum_probs=29.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|-||+||.|..++++|.++|..-.+..|+.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~   40 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSS   40 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCH
Confidence            3689999999999999999999998876667764

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=95.40  E-value=0.044  Score=38.18  Aligned_cols=36  Identities=25%  Similarity=0.251  Sum_probs=29.3

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEe
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYA   38 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~   38 (91)
                      |++ |.+++|.|+|. |.||+.+++.|.+.  ++++.++.
T Consensus         1 ~~~-m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~   38 (271)
T PRK13302          1 MSS-RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVA   38 (271)
T ss_pred             CCC-CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEE
Confidence            556 66789999998 99999999999873  68877554

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=95.40  E-value=0.14  Score=36.15  Aligned_cols=29  Identities=21%  Similarity=0.334  Sum_probs=26.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEE
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVY   37 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~   37 (91)
                      +|+|.|++|.+|+.+++...+.+.++...
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~~~~~Lv~~   30 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADAAGLEIVPT   30 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhcCCCEEEee
Confidence            68999999999999999999888887774

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=95.39  E-value=0.037  Score=41.58  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      +|+|.|+|. ||+|..++-.|.+.|  ++|++++.+.
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~   36 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISV   36 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCH
Confidence            478999977 999999999999884  7899998764

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.37  E-value=0.052  Score=38.39  Aligned_cols=33  Identities=12%  Similarity=0.198  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY   37 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~   37 (91)
                      ...++|.|+|.||.+|..++..|+++|+.|++.
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~  188 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT  188 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999999987

>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]

Probab=95.36  E-value=0.042  Score=40.65  Aligned_cols=37  Identities=22%  Similarity=0.203  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~   42 (91)
                      +.+++|+|.|| ||-|.+.+..|..+-  .+|++++|...
T Consensus         1 ~~~~~iVIlGg-GfgGl~~a~~l~~~~~~~~itLVd~~~~   39 (405)
T COG1252           1 MMKKRIVILGG-GFGGLSAAKRLARKLPDVEITLVDRRDY   39 (405)
T ss_pred             CCCceEEEECC-cHHHHHHHHHhhhcCCCCcEEEEeCCCc
Confidence            35789999999 999999999999874  88999998754

>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.36  E-value=0.033  Score=42.11  Aligned_cols=36  Identities=22%  Similarity=0.360  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~   41 (91)
                      +.+++|.|+|| |.-|.+-+++|.+.|++|+++- |+.
T Consensus        13 ~~~~~VIVIGA-GiaGLsAArqL~~~G~~V~VLEARdR   49 (501)
T KOG0029|consen   13 GKKKKVIVIGA-GLAGLSAARQLQDFGFDVLVLEARDR   49 (501)
T ss_pred             cCCCcEEEECC-cHHHHHHHHHHHHcCCceEEEeccCC
Confidence            45678999999 9999999999999999999984 543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	91
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		2e-16
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		8e-11
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		8e-11
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		8e-11
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		8e-11
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		2e-07
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		1e-06
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		2e-04

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/73 (49%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Query: 9  KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLC 68
          K +I+GGTGY+GK+MV+AS+S  H TF+YARP+T +S PS +++ +EF+ +GVTIIE   
Sbjct: 6  KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE--- 62
Query: 69 DVGQVTSSQRMRS 81
            G++   ++M S
Sbjct: 63 --GEMEEHEKMVS 73

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 1  MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
          ME    K K LIFGGTGY+G +MVK S+  GH T+V+ RP   NS  SK  +  EFQ +G
Sbjct: 5  MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP---NS--SKTTLLDEFQSLG 59
Query: 61 VTIIENLCD 69
            I++   D
Sbjct: 60 AIIVKGELD 68

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 1  MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
          ME    K K LIFGGTGY+G +MVK S+  GH T+V+ RP   NS  SK  +  EFQ +G
Sbjct: 5  MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP---NS--SKTTLLDEFQSLG 59
Query: 61 VTIIENLCD 69
            I++   D
Sbjct: 60 AIIVKGELD 68

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 1  MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
          ME    K K LIFGGTGY+G +MVK S+  GH T+V+ RP   NS  SK  +  EFQ +G
Sbjct: 5  MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP---NS--SKTTLLDEFQSLG 59
Query: 61 VTIIENLCD 69
            I++   D
Sbjct: 60 AIIVKGELD 68

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 1  MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
          ME    K K LIFGGTGY+G +MVK S+  GH T+V+ RP   NS  SK  +  EFQ +G
Sbjct: 1  MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP---NS--SKTTLLDEFQSLG 55
Query: 61 VTIIENLCD 69
            I++   D
Sbjct: 56 AIIVKGELD 64

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 5  NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
          + K + LI GGTGY+GK +V AS+S GH T+V  RP    S   K+++   F+ +G  +I
Sbjct: 2  DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV-SNIDKVQMLLYFKQLGAKLI 60
Query: 65 ENLCD--------VGQVTSSQRMRSGRSLGHHLI 90
          E   D        + QV       +G  L HH++
Sbjct: 61 EASLDDHQRLVDALKQVDVVISALAGGVLSHHIL 94

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 6  TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
          ++ + L+ G TGY+G+++ KAS+  GH TF+  R  T +S   K ++ + F+  G  I+ 
Sbjct: 3  SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 62
Query: 66 NLCD 69
             D
Sbjct: 63 GSID 66

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEN 66
          K + LI G TG++G+++  AS+ +   T++ ARP  ++  PSK +I K  +  G  I+  
Sbjct: 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS--PSKAKIFKALEDKGAIIVYG 67
Query: 67 LCD 69
          L +
Sbjct: 68 LIN 70

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	91
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	4e-18
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	1e-15
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-15
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	5e-15
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-14
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	5e-04
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-04

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 75.7 bits (186), Expect = 4e-18
 Identities = 34/71 (47%), Positives = 53/71 (74%), Gaps = 1/71 (1%)

Query: 6  TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
             K +I+GGTGY+GK+MV+AS+S  H TF+YARP+T +S PS +++ +EF+ +GVTIIE
Sbjct: 3  HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE 62

Query: 66 -NLCDVGQVTS 75
            + +  ++ S
Sbjct: 63 GEMEEHEKMVS 73

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 73.4 bits (180), Expect = 2e-17
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 6  TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
          ++ + L+ G TGY+G+++ KAS+  GH TF+  R  T +S   K ++ + F+  G  I+ 
Sbjct: 3  SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 62

Query: 66 -NLCDVGQVTS 75
           ++ D   +  
Sbjct: 63 GSIDDHASLVE 73

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 68.8 bits (168), Expect = 1e-15
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 6  TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPS-KLEIHKEFQGIGVTII 64
          T+ K LI G TG +G+++V AS+ +G+ T+   R     + P  K E+   +Q +GV ++
Sbjct: 1  TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60

Query: 65 E-NLCDVGQVTS 75
          E ++ D   +  
Sbjct: 61 EGDINDHETLVK 72

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 68.4 bits (167), Expect = 2e-15
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 5  NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
          + K + LI GGTGY+GK +V AS+S GH T+V  RP    S   K+++   F+ +G  +I
Sbjct: 2  DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV-VSNIDKVQMLLYFKQLGAKLI 60

Query: 65 E-NLCDVGQVTS 75
          E +L D  ++  
Sbjct: 61 EASLDDHQRLVD 72

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 67.0 bits (163), Expect = 5e-15
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 6  TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
           K + LI G TG++G+++  AS+ +   T++ ARP  ++  PSK +I K  +  G  I+ 
Sbjct: 9  PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS--PSKAKIFKALEDKGAIIVY 66

Query: 66 -NLCDVGQVTS 75
            + +   +  
Sbjct: 67 GLINEQEAMEK 77

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 65.7 bits (160), Expect = 1e-14
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 1  MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
          ME    K K LIFGGTGY+G +MVK S+  GH T+V+ RP       SK  +  EFQ +G
Sbjct: 5  MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-----NSSKTTLLDEFQSLG 59

Query: 61 VTIIE-NLCDVGQVTS 75
            I++  L +  ++  
Sbjct: 60 AIIVKGELDEHEKLVE 75

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 9  KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE-NL 67
          K  + G TG LG +  +A  ++GH+  +  RP       S+++       +        +
Sbjct: 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRP------SSQIQ---RLAYLEPECRVAEM 65

Query: 68 CDVGQVT 74
           D   + 
Sbjct: 66 LDHAGLE 72

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 36.1 bits (83), Expect = 5e-04
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 10/55 (18%)

Query: 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
           I G TG  G  +++ + + GH      R         K+    +     + I++
Sbjct: 4  GIIGATGRAGSRILEEAKNRGHEVTAIVR------NAGKITQTHK----DINILQ 48

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 11/61 (18%)

Query: 6  TKPKK-LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
           K KK ++ G +G++G  ++  +++ G       R       P K++I  E     + + 
Sbjct: 2  EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVR------HPEKIKIENE----HLKVK 51

Query: 65 E 65
          +
Sbjct: 52 K 52

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.56
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.54
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.54
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.5
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.49
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.48
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.48
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.47
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.47
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.47
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.46
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.46
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.46
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.44
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.43
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.43
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.43
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.42
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.42
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.41
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.41
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.41
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.4
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.4
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.39
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.39
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.39
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.39
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.38
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.38
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.38
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.38
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.38
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.37
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.37
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.37
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.37
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.37
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.37
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.37
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.37
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.37
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.36
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.36
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.36
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.35
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.35
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.35
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.35
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.34
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.34
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.33
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.33
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.33
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.33
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.32
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.32
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.32
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.32
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.32
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.32
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.32
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.32
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.31
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.31
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.31
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.31
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.31
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.3
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.3
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.3
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.3
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.3
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.29
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.29
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.29
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.29
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.29
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.29
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.29
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.29
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.29
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.28
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.28
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.28
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.28
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.28
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.28
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.28
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.28
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.28
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.28
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.27
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.27
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.27
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.27
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.27
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.26
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.26
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.26
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.26
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.26
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.26
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.25
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.25
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.25
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.25
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.25
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.25
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.25
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.25
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.24
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.24
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.24
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.24
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.23
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.23
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.23
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.23
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.23
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.23
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.23
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.23
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.23
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.23
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.22
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.22
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.22
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.22
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.22
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.22
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.22
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.21
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.21
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.21
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.21
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.21
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.2
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.2
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.2
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.2
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.2
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.2
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.2
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.2
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.2
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.2
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.2
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.2
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.2
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.19
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.19
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.19
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.19
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.19
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.19
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.19
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.19
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.19
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.19
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.19
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.18
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.18
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.18
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.18
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.18
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.18
1spx_A	278	Short-chain reductase family member (5L265); paral	99.18
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.18
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.18
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.18
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.18
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.17
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.17
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.17
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.17
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.17
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.17
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.17
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.17
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.17
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.17
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.17
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.17
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.17
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.16
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.16
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.16
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.16
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.16
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.16
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.16
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.16
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.16
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.15
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.15
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.15
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.15
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.15
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.15
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.15
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.15
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.15
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.14
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.14
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.14
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.14
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.14
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.14
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.14
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.14
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.14
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.13
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.13
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.13
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.13
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.13
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.12
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.12
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.12
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.12
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.12
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.12
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.12
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.11
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.11
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.11
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.11
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.11
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.11
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.11
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.11
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.1
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.1
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.1
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.1
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.1
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.1
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.1
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.1
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.09
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.09
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.09
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.09
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.09
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.09
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.08
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.08
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.08
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.07
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.07
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.07
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.06
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.06
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.06
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.05
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.05
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.05
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.05
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.04
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.03
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.03
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.03
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.02
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.02
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.02
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.02
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.02
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.01
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.0
1id1_A	153	Putative potassium channel protein; RCK domain, E.	99.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.99
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.98
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.98
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.97
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.97
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.95
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.95
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.94
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.93
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.91
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.89
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.89
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.88
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.88
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.86
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.86
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.83
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.81
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	98.81
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.81
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.76
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.74
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.73
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.7
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.68
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.68
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.67
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.66
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.66
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.65
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.63
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.62
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.6
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.5
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.49
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.49
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.49
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.49
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.47
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.47
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.45
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.45
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.39
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.39
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.38
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.37
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.34
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.34
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.3
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.26
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.22
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.21
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.15
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.14
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.14
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.09
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.08
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.07
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.05
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.04
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.02
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.97
1lnq_A	336	MTHK channels, potassium channel related protein;	97.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.89
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.86
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.83
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.72
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.64
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.64
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.63
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.6
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.59
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.59
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.57
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.56
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.55
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.53
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.51
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.51
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.49
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.49
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.49
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	97.49
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.48
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.48
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.46
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.46
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.45
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.45
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.44
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.43
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.42
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.42
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.42
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	97.39
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.39
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.37
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.37
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.35
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	97.33
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.29
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	97.25
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.24
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	97.24
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.22
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.21
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	97.2
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	97.2
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.18
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.16
4hb9_A	412	Similarities with probable monooxygenase; flavin,	97.16
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.16
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.15
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.15
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.15
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.14
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.13
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.11
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.11
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	97.1
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.1
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.1
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.09
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.09
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	97.08
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.07
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.07
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	97.07
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.06
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.05
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.05
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.03
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.01
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.01
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.0
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	97.0
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.99
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.98
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.98
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	96.98
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	96.98
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.96
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.96
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.95
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.94
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.94
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	96.94
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.93
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.93
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.93
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.92
3kkj_A	336	Amine oxidase, flavin-containing; oxidoreductase,	96.91
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.91
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	96.91
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.91
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.91
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	96.89
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	96.88
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.87
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.86
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.85
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.84
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.84
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	96.83
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	96.83
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.82
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.78
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.78
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	96.77
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.77
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.76
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.76
2vou_A	397	2,6-dihydroxypyridine hydroxylase; oxidoreductase,	96.76
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.76
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.76
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.76
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.76
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.74
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.73
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	96.72
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.71
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	96.68
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	96.68
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	96.68
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.67
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.66
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.65
3alj_A	379	2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG;	96.64
2ywl_A	180	Thioredoxin reductase related protein; uncharacter	96.64
3rp8_A	407	Flavoprotein monooxygenase; FAD-binding protein, o	96.64
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	96.63
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.62
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.62
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.62
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.61
3ihm_A	430	Styrene monooxygenase A; rossman fold, anti-parall	96.6
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.59
1c0p_A	363	D-amino acid oxidase; alpha-beta-alpha motif, flav	96.59
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.58
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.58
2xdo_A	398	TETX2 protein; tetracycline degradation, tigecycli	96.57
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.56
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.56
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.54
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	96.54
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.54
3h8l_A	409	NADH oxidase; membrane protein, complete form, ros	96.54
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.54
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.53
4a9w_A	357	Monooxygenase; baeyer-villiger, FAD, oxidoreductas	96.53
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.52
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.52
4g6h_A	502	Rotenone-insensitive NADH-ubiquinone oxidoreducta	96.51
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.51
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	96.51
1yvv_A	336	Amine oxidase, flavin-containing; oxidoreductase,	96.51
3iwa_A	472	FAD-dependent pyridine nucleotide-disulphide oxido	96.5
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.49
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.49
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	96.48
2bi7_A	384	UDP-galactopyranose mutase; FAD, flavoprotein, iso	96.48
3lzw_A	332	Ferredoxin--NADP reductase 2; ferredoxin reductase	96.48
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	96.47
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.47
4dgk_A	501	Phytoene dehydrogenase; the FAD/NAD(P)-binding ros	96.45
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.44

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.56  E-value=1.2e-14  Score=100.81  Aligned_cols=73  Identities=29%  Similarity=0.504  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |++|+|+|||||||||++++++|+++|++|++++|+.+..  +++...+..+...+++++.+|++|.+.+.+++.
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~   80 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS--PSKAKIFKALEDKGAIIVYGLINEQEAMEKILK   80 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC--HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC--hhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHh
Confidence            5567999999999999999999999999999999976332  344444444555689999999999999998864

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.54  E-value=2.3e-14  Score=97.44  Aligned_cols=72  Identities=29%  Similarity=0.499  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++|+|||||||+|++++++|+++|++|++++|+.+...++++...+..+...+++++++|++|++++.+++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~   75 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV   75 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHH
Confidence            578999999999999999999999999999999754210123333333344568999999999999998875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.54  E-value=2.2e-14  Score=97.71  Aligned_cols=71  Identities=38%  Similarity=0.562  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+|||||||+|++++++|+++|++|++++|+.+.. ++++...+..+...+++++++|++|++++.+++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVS-NIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSS-CHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCccc-chhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH
Confidence            57899999999999999999999999999999986432 133333333344568999999999999998875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.50  E-value=7.3e-14  Score=95.65  Aligned_cols=67  Identities=42%  Similarity=0.685  Sum_probs=54.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++|+||||||++|++++++|+++|++|++++|+.+.     +...+..+...+++++++|++|++++.+++
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~   77 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS-----KTTLLDEFQSLGAIIVKGELDEHEKLVELM   77 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCS-----CHHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCc-----hhhHHHHhhcCCCEEEEecCCCHHHHHHHH
Confidence            3589999999999999999999999999999998631     122222233458999999999999998875

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.49  E-value=9.4e-14  Score=95.08  Aligned_cols=72  Identities=44%  Similarity=0.782  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC-CCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+|+|+|||||||+|++++++|+++|++|++++|+. +.. .+++...+..+...+++++.+|++|++++.+++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~   75 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDS-TPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL   75 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTC-CHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCccccc-ChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH
Confidence            357899999999999999999999999999999985 321 122333333334458999999999999998875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.48  E-value=8.9e-14  Score=94.43  Aligned_cols=72  Identities=28%  Similarity=0.458  Sum_probs=56.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCc-chHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRP-SKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+|||||||||++++++|+++|++|++++|+.+....+ ++...+..+...+++++++|++|++++.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAI   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHH
Confidence            46899999999999999999999999999999985211022 3333233333458999999999999998875

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.48  E-value=1.5e-13  Score=95.00  Aligned_cols=72  Identities=14%  Similarity=0.056  Sum_probs=55.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++|+|+|||||||||++++++|+++||+|++++|.....  ......+....    ..+++++.+|++|++.+.+++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGH--QYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM   98 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--HHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCc--hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            3568999999999999999999999999999999976432  11111111110    047999999999999988865

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.47  E-value=1.4e-13  Score=88.39  Aligned_cols=64  Identities=17%  Similarity=0.112  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.|+|+|||||||||++++++|+++|++|++++|+....         ......+++++.+|++|++.+.+.+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~   65 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL---------PSEGPRPAHVVVGDVLQAADVDKTV   65 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS---------CSSSCCCSEEEESCTTSHHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc---------ccccCCceEEEEecCCCHHHHHHHH
Confidence            347899999999999999999999999999999975321         1111347899999999999988875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.47  E-value=1.8e-13  Score=95.32  Aligned_cols=66  Identities=14%  Similarity=0.137  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCC-ChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCD-VGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~-d~~~l~~~~   78 (91)
                      |++|+|+|||||||||++|+++|+++ ||+|++++|+....      .  ......+++++.+|++ |.+.+.+++
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~------~--~~~~~~~v~~~~~Dl~~d~~~~~~~~   89 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL------G--DLVKHERMHFFEGDITINKEWVEYHV   89 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT------G--GGGGSTTEEEEECCTTTCHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh------h--hhccCCCeEEEeCccCCCHHHHHHHh
Confidence            56789999999999999999999998 99999999975332      1  1112358999999999 888888765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.47  E-value=2.6e-13  Score=93.27  Aligned_cols=72  Identities=17%  Similarity=0.199  Sum_probs=55.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+|+|+|||||||||++++++|+++|++|++++|.....  ......+......+++++.+|++|++.+.+.+.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK--REAIARIEKITGKTPAFHETDVSDERALARIFD   75 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC--THHHHHHHHHHSCCCEEECCCTTCHHHHHHHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch--HHHHHHHHhhcCCCceEEEeecCCHHHHHHHHh
Confidence            356899999999999999999999999999999976433  122222222224578999999999999988763

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.46  E-value=1.1e-13  Score=90.56  Aligned_cols=62  Identities=11%  Similarity=0.153  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+|||||||||++++++|+++|++|++++|+....         ..+ ..+++++.+|++|++.+.+++
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~-~~~~~~~~~Dl~d~~~~~~~~   65 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI---------KIE-NEHLKVKKADVSSLDEVCEVC   65 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC---------CCC-CTTEEEECCCTTCHHHHHHHH
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc---------hhc-cCceEEEEecCCCHHHHHHHh
Confidence            47999999999999999999999999999999975321         111 147899999999999998875

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.46  E-value=1e-13  Score=91.91  Aligned_cols=66  Identities=12%  Similarity=0.100  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .|.+|+|+||||||+||++++++|+++| ++|++++|+....         ..+...+++++++|++|++.+.+++
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~---------~~~~~~~~~~~~~Dl~d~~~~~~~~   86 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI---------HKPYPTNSQIIMGDVLNHAALKQAM   86 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS---------CSSCCTTEEEEECCTTCHHHHHHHH
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh---------cccccCCcEEEEecCCCHHHHHHHh
Confidence            3556789999999999999999999999 9999999975321         1222347899999999999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.46  E-value=2.7e-13  Score=93.14  Aligned_cols=63  Identities=19%  Similarity=0.179  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+|||||||||++++++|+++|++|++++|+....         ..+...+++++.+|++|++.+.+++
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~l~~~~~~~~~~Dl~d~~~~~~~~   75 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI---------QRLAYLEPECRVAEMLDHAGLERAL   75 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG---------GGGGGGCCEEEECCTTCHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh---------hhhccCCeEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999999999999975321         1122237899999999999888865

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.44  E-value=4.6e-13  Score=93.22  Aligned_cols=74  Identities=19%  Similarity=0.204  Sum_probs=54.3

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHh--CCCcEEEEecCCCCCC----CcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVS--SGHNTFVYARPVTQNS----RPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~--~g~~V~~~~R~~~~~~----~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      .+.+|+|+|||||||||++++++|++  .|++|++++|......    ..+.......+...+++++.+|++|++.+.++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            45678999999999999999999999  9999999999754100    00000111223344679999999999988886

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.43  E-value=5.1e-13  Score=92.05  Aligned_cols=68  Identities=12%  Similarity=0.160  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+|||||||||++++++|+++  |++|++++|.....    ....+..+...+++++.+|++|++.+.+++
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG----NKANLEAILGDRVELVVGDIADAELVDKLA   73 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC----CGGGTGGGCSSSEEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC----ChhHHhhhccCCeEEEECCCCCHHHHHHHh
Confidence            578999999999999999999998  89999999975321    111122333357899999999999888865

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.43  E-value=5.4e-13  Score=91.73  Aligned_cols=69  Identities=19%  Similarity=0.172  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|||||||||||++++++|+++||+|++++|+....   .+...+..+. ..+++++++|++|++.+.+++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQ---KKVSHLLELQELGDLKIFRADLTDELSFEAPI   78 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCT---TTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchh---hhHHHHHhcCCCCcEEEEecCCCChHHHHHHH
Confidence            47899999999999999999999999999999975322   1111111121 236889999999998888765

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.43  E-value=3.6e-13  Score=90.97  Aligned_cols=62  Identities=13%  Similarity=0.046  Sum_probs=52.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|.+. |++|++++|+....         ..+...+++++.+|++|++.+.+++
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~---------~~~~~~~v~~~~~D~~d~~~l~~~~   63 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV---------PDDWRGKVSVRQLDYFNQESMVEAF   63 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS---------CGGGBTTBEEEECCTTCHHHHHHHT
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH---------HHhhhCCCEEEEcCCCCHHHHHHHH
Confidence            57999999999999999999998 99999999975321         2233458999999999999998875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.42  E-value=6.3e-13  Score=91.13  Aligned_cols=69  Identities=20%  Similarity=0.072  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.|+|+|||||||||++++++|+++|++|++++|+....   . ...+..+ ...+++++.+|++|++.+.+++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~---~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEF---A-SWRLKELGIENDVKIIHMDLLEFSNIIRTI   71 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTT---T-THHHHHTTCTTTEEECCCCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccc---c-cccHhhccccCceeEEECCCCCHHHHHHHH
Confidence            457899999999999999999999999999999976432   1 1111222 1236899999999999888875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.42  E-value=6.7e-13  Score=91.06  Aligned_cols=70  Identities=13%  Similarity=0.057  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .++|+|||||||||||++++++|+++|++|++++|..... ..   ..+..+ ...+++++.+|++|++.+.+++
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   82 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD-TR---WRLRELGIEGDIQYEDGDMADACSVQRAV   82 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC-CC---HHHHHTTCGGGEEEEECCTTCHHHHHHHH
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccc-cc---cchhhccccCceEEEECCCCCHHHHHHHH
Confidence            4568999999999999999999999999999999976432 11   111222 1246899999999999888875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.41  E-value=3.2e-13  Score=88.26  Aligned_cols=60  Identities=25%  Similarity=0.287  Sum_probs=50.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCC-hhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDV-GQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d-~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++|++|++++|+....         ..+  .+++++++|++| ++.+.+++
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---------~~~--~~~~~~~~D~~d~~~~~~~~~   61 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV---------PQY--NNVKAVHFDVDWTPEEMAKQL   61 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS---------CCC--TTEEEEECCTTSCHHHHHTTT
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch---------hhc--CCceEEEecccCCHHHHHHHH
Confidence            5899999999999999999999999999999975321         111  479999999999 88888765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.41  E-value=1.4e-12  Score=89.90  Aligned_cols=73  Identities=23%  Similarity=0.183  Sum_probs=53.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCC----CCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQN----SRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~----~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +|+|+|||||||||++++++|+++|++|++++|.....    ..++....+......+++++.+|++|++.+.+++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHH
Confidence            36899999999999999999999999999999865320    00112222222223478999999999998888653

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.41  E-value=1.4e-12  Score=89.62  Aligned_cols=68  Identities=16%  Similarity=0.203  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ||+|+|||||||||++++++|+++|++|++++|.....    .......+.. .+++++.+|++|++.+.+++
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~   69 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG----ATDNLHWLSSLGNFEFVHGDIRNKNDVTRLI   69 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTT----HHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccC----chhhhhhhccCCceEEEEcCCCCHHHHHHHH
Confidence            36899999999999999999999999999999864211    1111122222 25899999999999988875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.40  E-value=5.9e-13  Score=91.85  Aligned_cols=59  Identities=19%  Similarity=0.188  Sum_probs=48.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..+|+|+|||||||||++++++|+++|++|++++|....               .+++++.+|++|++.+.+++
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~   75 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAI   75 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHH
Confidence            456789999999999999999999999999999997421               26788899999998888765

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.40  E-value=1.1e-12  Score=91.52  Aligned_cols=70  Identities=14%  Similarity=0.036  Sum_probs=51.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-h---cCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-F---QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l---~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++|+|||||||||++++++|+++|++|++++|+.... .......+.. .   ...+++++.+|++|++.+.+++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF-NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKII   98 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC-CCTTTGGGC---------CEEEEECCTTCHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcccc-chhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHH
Confidence            6899999999999999999999999999999975431 0111111100 0   2246899999999999888865

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.39  E-value=4.7e-13  Score=92.13  Aligned_cols=70  Identities=13%  Similarity=0.149  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+++|||||||||||++++++|+++||+|++++|+...   ..+...+..+..  .+++++++|++|++.+.+++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   75 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN---VKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI   75 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC---HHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch---hHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH
Confidence            35789999999999999999999999999999997531   111111111111  25789999999999888865

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.39  E-value=9e-13  Score=90.87  Aligned_cols=71  Identities=14%  Similarity=0.185  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +.+|+|+|||||||||++++++|+++|  ++|++++|.....    ....+..+ ...+++++.+|++|++.+.+++.
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~   95 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG----NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIK   95 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC----CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc----chhhhhhhccCCCeEEEEcCCCCHHHHHHHHh
Confidence            345789999999999999999999999  6777777764221    11111222 23479999999999999988753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.39  E-value=1.5e-12  Score=91.36  Aligned_cols=64  Identities=11%  Similarity=-0.004  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+|+|+|||||||||++++++|+++|++|++++|.....  .       .....+++++.+|++|++.+.+++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH--M-------TEDMFCDEFHLVDLRVMENCLKVT   91 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS--S-------CGGGTCSEEEECCTTSHHHHHHHH
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc--h-------hhccCCceEEECCCCCHHHHHHHh
Confidence            357899999999999999999999999999999975432  1       111237899999999999888875

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.39  E-value=1.8e-12  Score=86.57  Aligned_cols=75  Identities=8%  Similarity=0.046  Sum_probs=57.5

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC---------CCeEEEEeeCCC
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG---------IGVTIIENLCDV   70 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~---------~~v~~v~gDl~d   70 (91)
                      |+..+..++++||||+|+||++++++|+++|++|++++|+..      +.. ....+..         ..+.++.+|++|
T Consensus         1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   74 (264)
T 2pd6_A            1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRA------AAQETVRLLGGPGSKEGPPRGNHAAFQADVSE   74 (264)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH------HHHHHHHTC------------CCEEEECCTTS
T ss_pred             CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH------HHHHHHHHHHhcCccccccCcceEEEEecCCC
Confidence            667778889999999999999999999999999999999642      211 1111211         357899999999


Q ss_pred             hhhhhHHHhhh
Q 037506           71 GQVTSSQRMRS   81 (91)
Q Consensus        71 ~~~l~~~~~~~   81 (91)
                      ++.+.+.+...
T Consensus        75 ~~~~~~~~~~~   85 (264)
T 2pd6_A           75 ARAARCLLEQV   85 (264)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998876443

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.38  E-value=2.5e-12  Score=88.41  Aligned_cols=69  Identities=19%  Similarity=0.315  Sum_probs=52.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++|++|++++|.....  +.....+..+...+++++.+|++|++.+.+++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   69 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALMTEIL   69 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcc--hhHHHHHHhhcCCcceEEEccCCCHHHHHHHh
Confidence            4899999999999999999999999999998754321  12222222222346889999999999888775

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.38  E-value=5.9e-13  Score=89.63  Aligned_cols=62  Identities=15%  Similarity=0.189  Sum_probs=51.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++  ||+|++++|+....      .   .+...+++++.+|++|++.+.+++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------~---~l~~~~~~~~~~D~~d~~~l~~~~   64 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA------S---TLADQGVEVRHGDYNQPESLQKAF   64 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT------H---HHHHTTCEEEECCTTCHHHHHHHT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH------h---HHhhcCCeEEEeccCCHHHHHHHH
Confidence            47999999999999999999998  99999999975321      1   122247899999999999998875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.38  E-value=7.2e-13  Score=86.37  Aligned_cols=57  Identities=23%  Similarity=0.224  Sum_probs=47.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQV   73 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~   73 (91)
                      |+|+|||||||||++++++|+++|++|++++|+.      ++.   ..+...+++++.+|++|++.
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------~~~---~~~~~~~~~~~~~D~~d~~~   57 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP------QKA---ADRLGATVATLVKEPLVLTE   57 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHH---HHHTCTTSEEEECCGGGCCH
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc------ccc---ccccCCCceEEecccccccH
Confidence            5799999999999999999999999999999973      222   22334589999999999876

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.38  E-value=2.1e-12  Score=88.42  Aligned_cols=64  Identities=22%  Similarity=0.227  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ||+|+|||||||||++++++|+++|++|++++|.....  .      ..+. .+++++.+|++|++.+.+++.
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~------~~~~-~~~~~~~~D~~~~~~~~~~~~   64 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH--E------DAIT-EGAKFYNGDLRDKAFLRDVFT   64 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--G------GGSC-TTSEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc--h------hhcC-CCcEEEECCCCCHHHHHHHHh
Confidence            36899999999999999999999999999999975322  1      1122 268999999999998888753

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.38  E-value=2e-12  Score=88.67  Aligned_cols=70  Identities=13%  Similarity=0.179  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+.|+|+|||||||||++++++|+++|  ++|++++|..... ..+   .+..+. ..+++++.+|++|++.+.+++
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~-~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGS-NPA---NLKDLEDDPRYTFVKGDVADYELVKELV   73 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC-CGG---GGTTTTTCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccC-chh---HHhhhccCCceEEEEcCCCCHHHHHHHh
Confidence            345789999999999999999999986  8999999964221 111   112221 347899999999999888865

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.37  E-value=1.2e-12  Score=85.56  Aligned_cols=66  Identities=14%  Similarity=0.182  Sum_probs=52.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHH-hCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASV-SSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++|+||||||+||++++++|+ +.|++|++++|+..     .+...+.. ...+++++.+|++|++.+.+++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~-----~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~   71 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK-----TRIPPEII-DHERVTVIEGSFQNPGXLEQAV   71 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH-----HHSCHHHH-TSTTEEEEECCTTCHHHHHHHH
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc-----ccchhhcc-CCCceEEEECCCCCHHHHHHHH
Confidence            3459999999999999999999 89999999999742     02111110 3457899999999999998875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.37  E-value=3.7e-12  Score=85.80  Aligned_cols=78  Identities=15%  Similarity=0.076  Sum_probs=59.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+.      ++.+. ...+. ..+.++.+|++|++.+.+.+.
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~   73 (260)
T 1nff_A            1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD------EEGKAMAAELA-DAARYVHLDVTQPAQWKAAVD   73 (260)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhh-cCceEEEecCCCHHHHHHHHH
Confidence            66677788999999999999999999999999999999964      22221 12222 247889999999999988765


Q ss_pred             hhhhhh
Q 037506           80 RSGRSL   85 (91)
Q Consensus        80 ~~~~~~   85 (91)
                      .....+
T Consensus        74 ~~~~~~   79 (260)
T 1nff_A           74 TAVTAF   79 (260)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            433333

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.37  E-value=2.3e-12  Score=89.21  Aligned_cols=72  Identities=13%  Similarity=0.080  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhh-hh---cCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHK-EF---QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~l---~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+|+|+|||||||||++++++|+++|++|++++|.....  .+....+. .+   ...+++++.+|++|++.+.+++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~  100 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH--QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC  100 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccc--hhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence            3467999999999999999999999999999999975321  11111111 11   1247899999999999888865

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.37  E-value=1.2e-12  Score=84.85  Aligned_cols=56  Identities=20%  Similarity=0.243  Sum_probs=47.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQV   73 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~   73 (91)
                      |+|+|||||||||++++++|+++|++|++++|+.      ++..   .+. .+++++.+|++|++.
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------~~~~---~~~-~~~~~~~~D~~d~~~   56 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA------GKIT---QTH-KDINILQKDIFDLTL   56 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS------HHHH---HHC-SSSEEEECCGGGCCH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc------hhhh---hcc-CCCeEEeccccChhh
Confidence            5899999999999999999999999999999974      2222   222 478999999999876

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.37  E-value=2.4e-12  Score=89.20  Aligned_cols=70  Identities=14%  Similarity=0.088  Sum_probs=54.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..|+|+|||||||||++++++|+++|++|++++|+....  +.....+.  ...+++++.+|++|++.+.+++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   76 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV--PSLFETAR--VADGMQSEIGDIRDQNKLLESI   76 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS--SCHHHHTT--TTTTSEEEECCTTCHHHHHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc--chhhHhhc--cCCceEEEEccccCHHHHHHHH
Confidence            4567999999999999999999999999999999975432  11111111  1247899999999999888865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.37  E-value=1.8e-12  Score=90.49  Aligned_cols=70  Identities=21%  Similarity=0.238  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhC-CC-cEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSS-GH-NTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~-g~-~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..+..|+|+|||||||||++++++|+++ |+ +|++++|+.      .+.. ....+...+++++.+|++|.+.+.+++
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~------~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~   89 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE------LKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL   89 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH------HHHHHHHHHHCCTTEEEEECCTTCHHHHHHHT
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh------hhHHHHHHHhcCCCEEEEECCCCCHHHHHHHH
Confidence            3456789999999999999999999999 97 999999963      2221 122233457999999999999988875

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.37  E-value=1.4e-12  Score=88.10  Aligned_cols=60  Identities=22%  Similarity=0.184  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |++|+|+||| +||||++++++|+++|++|++++|+....             ..+++++.+|++|++.+.+++
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~   60 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------------PAGVQTLIADVTRPDTLASIV   60 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------------CTTCCEEECCTTCGGGCTTGG
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccCCceEEccCCChHHHHHhh
Confidence            4567999999 59999999999999999999999975321             237899999999999888764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.37  E-value=1.4e-12  Score=86.30  Aligned_cols=74  Identities=16%  Similarity=0.139  Sum_probs=57.9

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhh---cCCCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEF---QGIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l---~~~~v~~v~gDl~d~~~l~~   76 (91)
                      |+-++..++++||||+|+||++++++|+++|++|++++|+.      ++.+. ...+   ....+.++.+|++|++.+.+
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG------ERAKAVAEEIANKYGVKAHGVEMNLLSEESINK   74 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCh------HHHHHHHHHHHhhcCCceEEEEccCCCHHHHHH
Confidence            66667788999999999999999999999999999999963      22211 1111   13468899999999999988


Q ss_pred             HHhh
Q 037506           77 QRMR   80 (91)
Q Consensus        77 ~~~~   80 (91)
                      .+..
T Consensus        75 ~~~~   78 (248)
T 2pnf_A           75 AFEE   78 (248)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.37  E-value=2e-12  Score=89.14  Aligned_cols=67  Identities=16%  Similarity=0.132  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..+|+|+|||||||||++++++|+++|++|++++|.....     ...+..+  .+++++.+|++|++.+.+++
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~l~~~--~~~~~~~~Dl~d~~~~~~~~   85 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR-----REHLKDH--PNLTFVEGSIADHALVNQLI   85 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-----GGGSCCC--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc-----hhhHhhc--CCceEEEEeCCCHHHHHHHH
Confidence            4567999999999999999999999999999999975321     1111111  37899999999999888865

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.36  E-value=1.2e-12  Score=89.03  Aligned_cols=60  Identities=17%  Similarity=0.218  Sum_probs=49.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |+|+|||||||||++++++|+++|++|++++|.....         ......+++++.+|+.|.+ +.+.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~Dl~d~~-~~~~   60 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR---------REFVNPSAELHVRDLKDYS-WGAG   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC---------GGGSCTTSEEECCCTTSTT-TTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc---------hhhcCCCceEEECccccHH-HHhh
Confidence            5899999999999999999999999999999976432         1112347899999999987 6654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.36  E-value=3.8e-12  Score=83.86  Aligned_cols=76  Identities=14%  Similarity=0.160  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      |++++++||||+|+||++++++|+++|  ++|++++|+...      .+.+..+....+.++.+|++|++.+.+.+....
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~------~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK------ATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVG   74 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG------CHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHH------HHHHHhccCCceEEEEeecCCHHHHHHHHHHHH
Confidence            345789999999999999999999999  999999997432      222222223468999999999999988765443


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        75 ~~~g   78 (250)
T 1yo6_A           75 EIVG   78 (250)
T ss_dssp             HHHG
T ss_pred             HhcC
Confidence            3343

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.36  E-value=2.6e-12  Score=88.55  Aligned_cols=68  Identities=22%  Similarity=0.333  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..|+|+|||||||||++++++|+++|++|++++|+....     ......+  .+++++.+|++|++.+.+++.
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~   85 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK-----REVLPPV--AGLSVIEGSVTDAGLLERAFD   85 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC-----GGGSCSC--TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc-----hhhhhcc--CCceEEEeeCCCHHHHHHHHh
Confidence            4567999999999999999999999999999999965321     1111112  378999999999998888753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.35  E-value=2.1e-12  Score=87.74  Aligned_cols=65  Identities=22%  Similarity=0.294  Sum_probs=53.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+||||||+||++++++|+++| ++|++++|+...    ...   ..+...+++++.+|++|++++.+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~----~~~---~~l~~~~~~~~~~D~~d~~~l~~~~   70 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRK----KAA---KELRLQGAEVVQGDQDDQVIMELAL   70 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTS----HHH---HHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCC----HHH---HHHHHCCCEEEEecCCCHHHHHHHH
Confidence            4789999999999999999999998 999999997532    111   1223347899999999999998875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.35  E-value=7.8e-13  Score=90.56  Aligned_cols=68  Identities=15%  Similarity=0.057  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-h---cCCCeEEE-EeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-F---QGIGVTII-ENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l---~~~~v~~v-~gDl~d~~~l~~~~   78 (91)
                      +..|+|+|||||||||++++++|+++||+|++++|+.      ++...+.. +   ...+++++ .+|++|++.+.+++
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA------SKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc------ccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH
Confidence            4567999999999999999999999999999999964      22211111 1   12468888 89999998887764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.35  E-value=1.4e-12  Score=86.00  Aligned_cols=64  Identities=14%  Similarity=0.063  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..|+|+||||||+||++++++|+++|+  +|++++|+....   ..      ....++.++.+|++|++.+.+.+
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~---~~------~~~~~~~~~~~D~~d~~~~~~~~   82 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF---DE------EAYKNVNQEVVDFEKLDDYASAF   82 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC---CS------GGGGGCEEEECCGGGGGGGGGGG
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc---cc------cccCCceEEecCcCCHHHHHHHh
Confidence            457899999999999999999999999  999999976432   10      11126789999999999888764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.35  E-value=1e-12  Score=86.76  Aligned_cols=64  Identities=17%  Similarity=0.250  Sum_probs=48.7

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCe-EEEEeeCCChhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGV-TIIENLCDVGQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v-~~v~gDl~d~~~l~~~~   78 (91)
                      ++..|+|+|||||||||++++++|+++|++|++++|+.      ++..   .+...++ +++.+|++  +.+.+++
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~------~~~~---~~~~~~~~~~~~~Dl~--~~~~~~~   82 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE------EQGP---ELRERGASDIVVANLE--EDFSHAF   82 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG------GGHH---HHHHTTCSEEEECCTT--SCCGGGG
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh------HHHH---HHHhCCCceEEEcccH--HHHHHHH
Confidence            35678999999999999999999999999999999974      2222   2223478 99999998  4555543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.34  E-value=4.4e-12  Score=83.78  Aligned_cols=71  Identities=20%  Similarity=0.114  Sum_probs=55.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+.      ++...... ...+++++.+|++|++.+++.+
T Consensus         1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~   71 (244)
T 1cyd_A            1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN------SDLVSLAK-ECPGIEPVCVDLGDWDATEKAL   71 (244)
T ss_dssp             --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHH-HSTTCEEEECCTTCHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHH-hccCCCcEEecCCCHHHHHHHH
Confidence            55667788999999999999999999999999999999963      22221111 1136788899999999998875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.34  E-value=1.2e-12  Score=89.22  Aligned_cols=68  Identities=13%  Similarity=0.242  Sum_probs=49.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEec-CCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++|+|||||||||++++++|+++||+|++++| +....   .+...+..+.  ..+++++.+|++|++.+.+++
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   72 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERK---RDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI   72 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-------CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccch---hHHHHHHhhhccCCceEEEecCCCCHHHHHHHH
Confidence            68999999999999999999999999999998 53211   1111111111  124788999999999988865

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.33  E-value=9.9e-12  Score=83.45  Aligned_cols=72  Identities=13%  Similarity=0.122  Sum_probs=56.4

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..+..++++||||+|+||++++++|+++|++|++++|+.      ++... ...+ ...+.++.+|++|++.+++.+...
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDI------ERARQAAAEI-GPAAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHh-CCCceEEEeeCCCHHHHHHHHHHH
Confidence            345668899999999999999999999999999999864      22222 2222 346889999999999998876443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.33  E-value=5.2e-12  Score=86.14  Aligned_cols=61  Identities=20%  Similarity=0.189  Sum_probs=50.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..+++|+|||||||||++++++|+++|++|++++|+....         . +   +++++.+|++|++.+.+++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~---------~-l---~~~~~~~Dl~d~~~~~~~~   70 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK---------L-P---NVEMISLDIMDSQRVKKVI   70 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC---------C-T---TEEEEECCTTCHHHHHHHH
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc---------c-c---eeeEEECCCCCHHHHHHHH
Confidence            3457899999999999999999999999999999975311         1 1   6889999999999988875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.33  E-value=4.1e-12  Score=89.04  Aligned_cols=73  Identities=11%  Similarity=0.104  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC--------------cchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR--------------PSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--------------~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      .+++|||||||||||++++++|+++|++|++++|.......              .+...........+++++.+|++|+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            35799999999999999999999999999999985311000              0001111112234789999999999


Q ss_pred             hhhhHHH
Q 037506           72 QVTSSQR   78 (91)
Q Consensus        72 ~~l~~~~   78 (91)
                      +.+.+++
T Consensus        90 ~~~~~~~   96 (404)
T 1i24_A           90 EFLAESF   96 (404)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9888765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.33  E-value=1.6e-12  Score=87.56  Aligned_cols=62  Identities=11%  Similarity=0.058  Sum_probs=52.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |++++|+||||||+||++++++|+++|++|++++|+....            ...+++++.+|++|++.+.+.+
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~------------~~~~~~~~~~Dl~d~~~~~~~~   62 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP------------AGPNEECVQCDLADANAVNAMV   62 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC------------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc------------cCCCCEEEEcCCCCHHHHHHHH
Confidence            3457899999999999999999999999999999975322            1347899999999999998865

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.32  E-value=4.5e-12  Score=86.35  Aligned_cols=63  Identities=17%  Similarity=0.224  Sum_probs=50.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+|+|||||||||++++++|+++|++|++++|.....     .   ..+. .+++++.+|++|++.+.+++.
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-----~---~~~~-~~~~~~~~Dl~~~~~~~~~~~   63 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGK-----R---ENVP-KGVPFFRVDLRDKEGVERAFR   63 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCC-----G---GGSC-TTCCEECCCTTCHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCc-----h---hhcc-cCeEEEECCCCCHHHHHHHHH
Confidence            5799999999999999999999999999999854221     1   1111 367889999999998888753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.32  E-value=5.6e-12  Score=83.65  Aligned_cols=72  Identities=11%  Similarity=0.039  Sum_probs=55.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC-CCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~-~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+ ...     .......+.  ...+.++.+|++|++.+++.+..
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   78 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN-----IDETIASMRADGGDAAFFAADLATSEACQQLVDE   78 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhh-----HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            3556889999999999999999999999999999997 321     111112221  23578999999999999887643

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.32  E-value=9.3e-12  Score=83.71  Aligned_cols=80  Identities=11%  Similarity=0.040  Sum_probs=58.3

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc----CCCeEEEEeeCCChhhhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ----GIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~----~~~v~~v~gDl~d~~~l~   75 (91)
                      |+..+..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+.    ..++.++.+|++|++.+.
T Consensus         1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~   74 (267)
T 2gdz_A            1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL------EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLR   74 (267)
T ss_dssp             -CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHH
T ss_pred             CCcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhhcCCCceEEEecCCCCHHHHH
Confidence            55555667899999999999999999999999999999964      2211 111221    235789999999999998


Q ss_pred             HHHhhhhhhhh
Q 037506           76 SQRMRSGRSLG   86 (91)
Q Consensus        76 ~~~~~~~~~~~   86 (91)
                      +.+......+|
T Consensus        75 ~~~~~~~~~~g   85 (267)
T 2gdz_A           75 DTFRKVVDHFG   85 (267)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHcC
Confidence            87644333333

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.32  E-value=8.8e-12  Score=82.91  Aligned_cols=75  Identities=15%  Similarity=0.053  Sum_probs=56.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      |++++++||||+|+||++++++|+++|++|++++|+.      ++.+. ...+. .++.++.+|++|++++++.+...-.
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~   73 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY------QRLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVE   73 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999974      22221 12222 3689999999999999887654433


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      .+|
T Consensus        74 ~~g   76 (235)
T 3l6e_A           74 WGG   76 (235)
T ss_dssp             HHC
T ss_pred             hcC
Confidence            333

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.32  E-value=1.2e-11  Score=82.93  Aligned_cols=74  Identities=15%  Similarity=0.183  Sum_probs=56.9

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~~l~~   76 (91)
                      |+-.+..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+.   ...+.++.+|++|++.+.+
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   74 (263)
T 3ai3_A            1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQV------DRLHEAARSLKEKFGVRVLEVAVDVATPEGVDA   74 (263)
T ss_dssp             CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH------HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            44456678999999999999999999999999999999964      2221 112221   3468899999999999988


Q ss_pred             HHhh
Q 037506           77 QRMR   80 (91)
Q Consensus        77 ~~~~   80 (91)
                      .+..
T Consensus        75 ~~~~   78 (263)
T 3ai3_A           75 VVES   78 (263)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7644

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.32  E-value=3.3e-12  Score=85.74  Aligned_cols=61  Identities=18%  Similarity=0.279  Sum_probs=50.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|||||||||++++++|+++  |++|++++|+....      .   .+...+++++.+|++|++.+.+++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------~---~~~~~~~~~~~~D~~d~~~~~~~~   63 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA------Q---ALAAQGITVRQADYGDEAALTSAL   63 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC------H---HHHHTTCEEEECCTTCHHHHHHHT
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh------h---hhhcCCCeEEEcCCCCHHHHHHHH
Confidence            5899999999999999999998  99999999975322      1   122247899999999999988875

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.32  E-value=5.6e-12  Score=85.99  Aligned_cols=59  Identities=20%  Similarity=0.308  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+|||||||||++++++|+++|++|++++|.+..      .   . +.  +++++.+|++ ++.+.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~---~-~~--~~~~~~~Dl~-~~~~~~~~   60 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN------K---A-IN--DYEYRVSDYT-LEDLINQL   60 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc------c---c-CC--ceEEEEcccc-HHHHHHhh
Confidence            4789999999999999999999999999999998321      1   1 11  7899999999 88888865

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.32  E-value=6.3e-12  Score=94.38  Aligned_cols=73  Identities=15%  Similarity=0.107  Sum_probs=54.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +.+|+|+|||||||||++++++|+++|++|++++|.....  ......+..+...+++++.+|++|++.+.+++.
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~   81 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST--YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFK   81 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcch--HHHHHHHhhccCCceEEEEcCCCCHHHHHHHHH
Confidence            4567999999999999999999999999999999975322  111122222234578999999999998888753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.31  E-value=1.2e-11  Score=83.63  Aligned_cols=70  Identities=16%  Similarity=0.096  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++++++||||+|+||++++++|+++|++|++++|+..      +...........++++.+|++|++.+.+.+...
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   73 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTE------ALDDLVAAYPDRAEAISLDVTDGERIDVVAADV   73 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG------GGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHhccCCceEEEeeCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999742      222211112346899999999999998876443

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.31  E-value=1.9e-11  Score=81.60  Aligned_cols=75  Identities=12%  Similarity=0.111  Sum_probs=56.4

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+..     ++.. .+... ...+.++.+|++|++.+++.+.
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~   74 (249)
T 2ew8_A            1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-----PEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGK   74 (249)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-----HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch-----hHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHH
Confidence            555567789999999999999999999999999999999741     1221 11211 2358889999999999988764


Q ss_pred             hh
Q 037506           80 RS   81 (91)
Q Consensus        80 ~~   81 (91)
                      ..
T Consensus        75 ~~   76 (249)
T 2ew8_A           75 QV   76 (249)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.31  E-value=3.8e-12  Score=87.59  Aligned_cols=65  Identities=11%  Similarity=0.000  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +.+|+|+|||||||||++++++|+++|       ++|++++|.....   .      .....+++++.+|++|++.+.++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~---~------~~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA---P------AGFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCC---C------TTCCSEEEEEECCTTSTTHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcc---c------cccCCceeEEEcCCCCHHHHHHH
Confidence            456789999999999999999999999       8999999975322   0      01223688999999999988876


Q ss_pred             H
Q 037506           78 R   78 (91)
Q Consensus        78 ~   78 (91)
                      +
T Consensus        83 ~   83 (342)
T 2hrz_A           83 V   83 (342)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.31  E-value=6.1e-12  Score=82.77  Aligned_cols=64  Identities=14%  Similarity=0.107  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+|+|+||||+||||++++++|+++  |++|++++|+.      ++..   .+ ..+++++.+|++|++.+.+.+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~------~~~~---~~-~~~~~~~~~D~~d~~~~~~~~   67 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA------QGKE---KI-GGEADVFIGDITDADSINPAF   67 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH------HHHH---HT-TCCTTEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC------Cchh---hc-CCCeeEEEecCCCHHHHHHHH
Confidence            34678999999999999999999999  89999999963      2221   22 236789999999999998875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.31  E-value=9.2e-12  Score=83.01  Aligned_cols=74  Identities=14%  Similarity=0.125  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....  ......+.......+.++.+|++|++.+++.+..
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~   85 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA--VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ   85 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH--HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh--HHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999964321  0111111111134688999999999998887543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.30  E-value=6.1e-12  Score=88.13  Aligned_cols=66  Identities=17%  Similarity=0.273  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+|+|+|||||||||++++++|+++| ++|++++|.....  .      ..+. ..+++++.+|++|++.+.+++
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~------~~l~~~~~v~~~~~Dl~d~~~l~~~~   97 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE--K------INVPDHPAVRFSETSITDDALLASLQ   97 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC--G------GGSCCCTTEEEECSCTTCHHHHHHCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc--h------hhccCCCceEEEECCCCCHHHHHHHh
Confidence            445789999999999999999999999 9999999975321  1      1111 347899999999998888764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.30  E-value=3.9e-12  Score=87.94  Aligned_cols=61  Identities=13%  Similarity=0.122  Sum_probs=51.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-----CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-----HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-----~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++|     ++|++++|.....   .       +...+++++.+|++|++.+.+++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~---~-------~~~~~~~~~~~Dl~d~~~~~~~~   67 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA---W-------HEDNPINYVQCDISDPDDSQAKL   67 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCS---C-------CCSSCCEEEECCTTSHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcc---c-------cccCceEEEEeecCCHHHHHHHH
Confidence            689999999999999999999999     9999999976432   0       12347899999999999888865

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.30  E-value=3.1e-12  Score=86.95  Aligned_cols=35  Identities=26%  Similarity=0.469  Sum_probs=33.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |||||||||||||++|+++|+++||+|++++|++.
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~   35 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG   35 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            68999999999999999999999999999999764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.30  E-value=1.2e-11  Score=81.45  Aligned_cols=67  Identities=16%  Similarity=0.084  Sum_probs=52.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .++|+||||+|+||++++++|+++|++|++++|+.      ++.+.+ ..+  .++.++.+|++|++.+.+.+...
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~   72 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDE------KRLQALAAEL--EGALPLPGDVREEGDWARAVAAM   72 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHS--TTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHh--hhceEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999963      222211 222  26889999999999988876443

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.30  E-value=1.2e-11  Score=83.01  Aligned_cols=83  Identities=6%  Similarity=-0.017  Sum_probs=59.9

Q ss_pred             CCCCCCCCeEEEEcCCch--HHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGY--LGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |.-.+..++++||||+|+  ||++++++|+++|++|++++|+...   .+... .........+.++.+|++|++.+++.
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   77 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL---EKSVHELAGTLDRNDSIILPCDVTNDAEIETC   77 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG---HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH---HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHH
Confidence            555567789999999998  9999999999999999999987421   11111 11222223689999999999999987


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +......+|
T Consensus        78 ~~~~~~~~g   86 (266)
T 3oig_A           78 FASIKEQVG   86 (266)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhC
Confidence            644433333

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.29  E-value=1.3e-11  Score=83.69  Aligned_cols=81  Identities=15%  Similarity=0.096  Sum_probs=57.6

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-----CCeEEEEeeCCChhhhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-----IGVTIIENLCDVGQVTS   75 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-----~~v~~v~gDl~d~~~l~   75 (91)
                      |.-.+..++++||||+|+||++++++|+++|++|++++|+...     .......+..     ..+.++.+|++|++.+.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~   79 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDK-----LAGAVQELEALGANGGAIRYEPTDITNEDETA   79 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHHTTCCSSCEEEEEECCTTSHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHHhCCCCceEEEEeCCCCCHHHHH
Confidence            3444567899999999999999999999999999999997421     1111122221     15788999999999998


Q ss_pred             HHHhhhhhhhh
Q 037506           76 SQRMRSGRSLG   86 (91)
Q Consensus        76 ~~~~~~~~~~~   86 (91)
                      +.+......+|
T Consensus        80 ~~~~~~~~~~g   90 (281)
T 3svt_A           80 RAVDAVTAWHG   90 (281)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHcC
Confidence            87654433333

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.29  E-value=2.4e-11  Score=82.20  Aligned_cols=80  Identities=14%  Similarity=0.061  Sum_probs=59.5

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+....     ......+ ...+.++.+|++|++++++.+..
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   78 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDL-----AGAAASV-GRGAVHHVVDLTNEVSVRALIDF   78 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCH-----HHHHHHH-CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHH-----HHHHHHh-CCCeEEEECCCCCHHHHHHHHHH
Confidence            44456678999999999999999999999999999999975321     1222223 34688999999999999987654


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus        79 ~~~~~g   84 (271)
T 3tzq_B           79 TIDTFG   84 (271)
T ss_dssp             HHHHHS
T ss_pred             HHHHcC
Confidence            433333

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.29  E-value=1.7e-11  Score=84.13  Aligned_cols=67  Identities=12%  Similarity=0.233  Sum_probs=51.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC---C---CcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS---G---HNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~---g---~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++   |   ++|++++|..... .+...   ..+. ..+++++.+|++|++.+.+++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG-NRANL---APVDADPRLRFVHGDIRDAGLLAREL   74 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC-CGGGG---GGGTTCTTEEEEECCTTCHHHHHHHT
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccC-chhhh---hhcccCCCeEEEEcCCCCHHHHHHHh
Confidence            58999999999999999999997   8   9999999975321 11111   2221 247899999999999888764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.29  E-value=1e-11  Score=86.83  Aligned_cols=70  Identities=13%  Similarity=0.018  Sum_probs=50.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhh--cCC-CeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEF--QGI-GVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l--~~~-~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++|+|||||||||++++++|+++|++|++++|+.... .......+ ...  ... +++++.+|++|++.+.+++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~  102 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNF-NTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWI  102 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC-CCTTTTTTC--------CCEEEEECCTTCHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccc-cchhhhhhhhccccccccceEEEECCCCCHHHHHHHH
Confidence            5899999999999999999999999999999975431 00011100 000  012 6889999999999888875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.29  E-value=6.6e-12  Score=84.13  Aligned_cols=78  Identities=18%  Similarity=0.121  Sum_probs=55.3

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-hc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-FQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |+-...+++++||||+|+||++++++|+++|++|++++|+..     ...+.... +.  ...+.++.+|++|++.+.+.
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   75 (264)
T 3i4f_A            1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT-----TAMETMKETYKDVEERLQFVQADVTKKEDLHKI   75 (264)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHH
T ss_pred             CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh-----HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            443445678999999999999999999999999999988642     11221111 11  23689999999999999987


Q ss_pred             Hhhhhh
Q 037506           78 RMRSGR   83 (91)
Q Consensus        78 ~~~~~~   83 (91)
                      +...-.
T Consensus        76 ~~~~~~   81 (264)
T 3i4f_A           76 VEEAMS   81 (264)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            654433

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.29  E-value=6.4e-12  Score=85.50  Aligned_cols=71  Identities=20%  Similarity=0.155  Sum_probs=55.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.. ....+.   ...+.++.+|++|++.+.+.+..
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD------VLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE   97 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999742      211 112221   34689999999999999887644


Q ss_pred             h
Q 037506           81 S   81 (91)
Q Consensus        81 ~   81 (91)
                      .
T Consensus        98 ~   98 (302)
T 1w6u_A           98 L   98 (302)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.29  E-value=6.3e-12  Score=87.26  Aligned_cols=71  Identities=13%  Similarity=0.031  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-h--cCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-F--QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l--~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|+|||||||||++++++|+++|++|++++|+.... .......+.. .  ...+++++.+|++|++.+.+.+
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSF-NTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccc-chHHHHHHhhccccCCCceEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999999999999975321 0011110000 0  1246889999999999888865

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.29  E-value=1.6e-11  Score=82.38  Aligned_cols=75  Identities=13%  Similarity=0.111  Sum_probs=55.5

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+-.+..++++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++.+|++|++++++.+
T Consensus         1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (252)
T 3h7a_A            1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL-----APLVAEIEAAGGRIVARSLDARNEDEVTAFL   75 (252)
T ss_dssp             ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGG-----HHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEECcCCCHHHHHHHH
Confidence            55556778999999999999999999999999999999975321     11112222  235789999999999998876


Q ss_pred             hh
Q 037506           79 MR   80 (91)
Q Consensus        79 ~~   80 (91)
                      ..
T Consensus        76 ~~   77 (252)
T 3h7a_A           76 NA   77 (252)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.29  E-value=1.8e-11  Score=85.71  Aligned_cols=67  Identities=15%  Similarity=0.161  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEee-CCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENL-CDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gD-l~d~~~l~~~~   78 (91)
                      .+|+|+|||||||||++++++|+++|++|++++|+.+.    .....+..  ..+++++.+| ++|++++.+++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~   71 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG----LIAEELQA--IPNVTLFQGPLLNNVPLMDTLF   71 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS----HHHHHHHT--STTEEEEESCCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCCh----hhHHHHhh--cCCcEEEECCccCCHHHHHHHH
Confidence            35789999999999999999999999999999997532    11111111  2378999999 99999998875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.28  E-value=8e-12  Score=83.38  Aligned_cols=76  Identities=16%  Similarity=0.090  Sum_probs=56.3

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |...+..++|+||||+|+||++++++|+++|++|++++|+.     +++.. ....+.  ...+.++.+|++|++.+.+.
T Consensus         1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   75 (261)
T 1gee_A            1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK-----EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCC-----hHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            44446678999999999999999999999999999999932     12221 112221  23578899999999998887


Q ss_pred             Hhhh
Q 037506           78 RMRS   81 (91)
Q Consensus        78 ~~~~   81 (91)
                      +...
T Consensus        76 ~~~~   79 (261)
T 1gee_A           76 VQSA   79 (261)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.28  E-value=1.5e-11  Score=85.11  Aligned_cols=68  Identities=15%  Similarity=0.129  Sum_probs=51.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+|+|||||||||++++++|++. |++|++++|.....    ....+..+. ..+++++.+|++|++.+.+++.
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   70 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG----NLESLSDISESNRYNFEHADICDSAEITRIFE   70 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC----CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCC----chhhhhhhhcCCCeEEEECCCCCHHHHHHHHh
Confidence            47999999999999999999998 79999999965211    111112221 3468999999999999888753

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.28  E-value=2.6e-11  Score=81.92  Aligned_cols=71  Identities=8%  Similarity=0.049  Sum_probs=55.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+.      ++.+. ...+. ..+.++.+|++|++++++.+...
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE------RLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHH
Confidence            35668899999999999999999999999999999963      22221 12222 36889999999999998876443

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.28  E-value=1.5e-11  Score=86.08  Aligned_cols=73  Identities=16%  Similarity=0.245  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHH-hCCCcEEEEecCCCCCC---CcchHHHh----hhhcC----CC---eEEEEeeCCCh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASV-SSGHNTFVYARPVTQNS---RPSKLEIH----KEFQG----IG---VTIIENLCDVG   71 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~~---~~~~~~~~----~~l~~----~~---v~~v~gDl~d~   71 (91)
                      .|+|+|||||||||++++++|+ ++|++|++++|......   .......+    ..+..    .+   ++++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 99999999998753210   00001111    11111    14   89999999999


Q ss_pred             hhhhHHHh
Q 037506           72 QVTSSQRM   79 (91)
Q Consensus        72 ~~l~~~~~   79 (91)
                      +.+.+++.
T Consensus        82 ~~~~~~~~   89 (397)
T 1gy8_A           82 DFLNGVFT   89 (397)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99888753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.28  E-value=2.8e-11  Score=81.19  Aligned_cols=75  Identities=16%  Similarity=0.133  Sum_probs=56.4

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc----CCCeEEEEeeCCChhhhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ----GIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~----~~~v~~v~gDl~d~~~l~   75 (91)
                      |+-.+..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+.    ..++.++.+|++|++.++
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   74 (260)
T 2z1n_A            1 MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNR------EKLEAAASRIASLVSGAQVDIVAGDIREPGDID   74 (260)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHH
Confidence            33335568899999999999999999999999999999964      2221 112221    226889999999999998


Q ss_pred             HHHhhh
Q 037506           76 SQRMRS   81 (91)
Q Consensus        76 ~~~~~~   81 (91)
                      +.+...
T Consensus        75 ~~~~~~   80 (260)
T 2z1n_A           75 RLFEKA   80 (260)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            876443

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.28  E-value=2.9e-11  Score=79.96  Aligned_cols=70  Identities=19%  Similarity=0.133  Sum_probs=55.1

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+-.+..++++||||+|+||++++++|+++|++|++++|+.      ++.+.+ ..+  .+.+++.+|++|++.+.+.+
T Consensus         1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   71 (244)
T 3d3w_A            1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ------ADLDSLVREC--PGIEPVCVDLGDWEATERAL   71 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHS--TTCEEEECCTTCHHHHHHHH
T ss_pred             CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHc--CCCCEEEEeCCCHHHHHHHH
Confidence            44456678999999999999999999999999999999963      222211 212  25788899999999998875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.28  E-value=2.7e-11  Score=82.51  Aligned_cols=72  Identities=19%  Similarity=0.234  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh-------cCCCeEEEEeeCCChhhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF-------QGIGVTIIENLCDVGQVT   74 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l-------~~~~v~~v~gDl~d~~~l   74 (91)
                      +.+..++++||||+|+||++++++|+++|++|++++|+..      +.. ....+       ....+.++.+|++|++.+
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v   87 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE------RLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   87 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhhccccCCccEEEEecCCCCHHHH
Confidence            4466789999999999999999999999999999999742      111 11112       123689999999999999


Q ss_pred             hHHHhh
Q 037506           75 SSQRMR   80 (91)
Q Consensus        75 ~~~~~~   80 (91)
                      .+.+..
T Consensus        88 ~~~~~~   93 (303)
T 1yxm_A           88 NNLVKS   93 (303)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887644

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.28  E-value=2.3e-11  Score=82.38  Aligned_cols=68  Identities=18%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.   ..+....+.++.+|++|++++++.+...
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~------~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV------ERL---KALNLPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH------HHH---HTTCCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH------HHH---HHhhcCCceEEEecCCCHHHHHHHHHHH
Confidence            4457899999999999999999999999999999963      222   2233347889999999999998876443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.28  E-value=1.3e-11  Score=83.00  Aligned_cols=80  Identities=15%  Similarity=0.103  Sum_probs=58.6

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+.+.
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (262)
T 1zem_A            1 MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR------EALEKAEASVREKGVEARSYVCDVTSEEAVIGT   74 (262)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            55567778999999999999999999999999999999964      2221 112222  23578899999999998887


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +...-..+|
T Consensus        75 ~~~~~~~~g   83 (262)
T 1zem_A           75 VDSVVRDFG   83 (262)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhC
Confidence            644433333

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.28  E-value=1.2e-11  Score=83.34  Aligned_cols=80  Identities=20%  Similarity=0.215  Sum_probs=59.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++++++.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   78 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTV------ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHL   78 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            45556778999999999999999999999999999999964      2221 112222  23688999999999999887


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +......+|
T Consensus        79 ~~~~~~~~g   87 (264)
T 3ucx_A           79 VDETMKAYG   87 (264)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHcC
Confidence            654433333

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.27  E-value=2.8e-11  Score=80.84  Aligned_cols=75  Identities=23%  Similarity=0.244  Sum_probs=56.4

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |...+..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+++.
T Consensus         1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~   74 (247)
T 2jah_A            1 MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRV------EKLRALGDELTAAGAKVHVLELDVADRQGVDAA   74 (247)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            44456678999999999999999999999999999999963      2221 112222  23588999999999999887


Q ss_pred             Hhhh
Q 037506           78 RMRS   81 (91)
Q Consensus        78 ~~~~   81 (91)
                      +...
T Consensus        75 ~~~~   78 (247)
T 2jah_A           75 VAST   78 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.27  E-value=8.2e-12  Score=84.73  Aligned_cols=62  Identities=13%  Similarity=0.026  Sum_probs=50.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +|+|+|||||||||++++++|+++  |++|++++|+....      ..   .  .+++++.+|++|++.+.+++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------~~---~--~~~~~~~~D~~d~~~~~~~~~   65 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT------DV---V--NSGPFEVVNALDFNQIEHLVE   65 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC------HH---H--HSSCEEECCTTCHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc------cc---c--CCCceEEecCCCHHHHHHHHh
Confidence            368999999999999999999998  89999999975321      11   1  257889999999998888753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.27  E-value=3.4e-11  Score=79.89  Aligned_cols=68  Identities=16%  Similarity=0.177  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCe-EEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGV-TIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v-~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+. ...+ ...+ .++.+|++|++.+++.+.
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~   78 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREA------AALDRAAQEL-GAAVAARIVADVTDAEAMTAAAA   78 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHh-cccceeEEEEecCCHHHHHHHHH
Confidence            3457899999999999999999999999999999964      22221 1222 2245 889999999999988753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.27  E-value=3.6e-11  Score=80.66  Aligned_cols=69  Identities=13%  Similarity=0.110  Sum_probs=53.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++... ...+. .++.++.+|++|++.+++.+..
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~D~~d~~~v~~~~~~   79 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDV------MAAQAVVAGLE-NGGFAVEVDVTKRASVDAAMQK   79 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHTCT-TCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHh-cCCeEEEEeCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999963      22221 12222 2678899999999999887643

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.27  E-value=2.5e-11  Score=81.27  Aligned_cols=75  Identities=12%  Similarity=0.047  Sum_probs=53.1

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |.-.+..+.++||||+|+||++++++|+++|++|++++|+....     ......+ ...+.++.+|++|++++++.+..
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   74 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAG-----EEPAAEL-GAAVRFRNADVTNEADATAALAF   74 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH-----HHHHHHh-CCceEEEEccCCCHHHHHHHHHH
Confidence            33345668899999999999999999999999999999976432     1111222 23678999999999999887644


Q ss_pred             h
Q 037506           81 S   81 (91)
Q Consensus        81 ~   81 (91)
                      .
T Consensus        75 ~   75 (257)
T 3tpc_A           75 A   75 (257)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.26  E-value=1.7e-11  Score=81.99  Aligned_cols=76  Identities=16%  Similarity=0.101  Sum_probs=57.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+.      ++... ...+ ...+.++++|++|++.+++.+....
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~   75 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE------AAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQ   75 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH------HHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHH
Confidence            35567899999999999999999999999999999863      22221 1222 3468899999999999988764433


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        76 ~~~g   79 (253)
T 1hxh_A           76 RRLG   79 (253)
T ss_dssp             HHHC
T ss_pred             HHcC
Confidence            3333

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.26  E-value=3.2e-11  Score=80.27  Aligned_cols=71  Identities=11%  Similarity=0.110  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++.+++.+..
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM-----ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS   83 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999996421     111112221  23689999999999998887643

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.26  E-value=4.8e-11  Score=79.63  Aligned_cols=70  Identities=14%  Similarity=0.096  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     .......+ ...+.++.+|++|++.+.+.+..
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~   79 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG-----GEAQAKKL-GNNCVFAPADVTSEKDVQTALAL   79 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSS-----HHHHHHHH-CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHh-----HHHHHHHh-CCceEEEEcCCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999997532     11222223 34689999999999999887643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.26  E-value=2.4e-11  Score=80.61  Aligned_cols=69  Identities=16%  Similarity=0.048  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.. ....+.  ...+.++.+|++|++.+++.+.
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   80 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD------AANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH------HHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999642      211 112221  2368889999999999988754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.26  E-value=1.1e-12  Score=89.13  Aligned_cols=42  Identities=31%  Similarity=0.492  Sum_probs=34.2

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |...+.+|+|+|||||||||++++++|+++||+|++++|...
T Consensus         1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            444455789999999999999999999999999999999764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.26  E-value=4.1e-11  Score=80.14  Aligned_cols=78  Identities=19%  Similarity=0.060  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +.+++++||||+|+||++++++|+++|   ++|++++|+....   +....+.. ...++.++.+|++|++.+.+.+...
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~---~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA---KELEDLAK-NHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC---HHHHHHHH-HCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh---HHHHHhhc-cCCceEEEEecCCChHHHHHHHHHH
Confidence            456789999999999999999999999   9999999976432   11111111 1246899999999999998876444


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus        95 ~~~~g   99 (267)
T 1sny_A           95 EGVTK   99 (267)
T ss_dssp             HHHHG
T ss_pred             HHhcC
Confidence            33344

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.25  E-value=3e-11  Score=81.29  Aligned_cols=71  Identities=15%  Similarity=0.037  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc----CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ----GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~----~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.. ....+.    ...+.++.+|++|++.+++.+.
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   84 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE------GLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVT   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999742      211 111121    3468899999999999988764


Q ss_pred             hh
Q 037506           80 RS   81 (91)
Q Consensus        80 ~~   81 (91)
                      ..
T Consensus        85 ~~   86 (267)
T 1iy8_A           85 AT   86 (267)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.25  E-value=2.3e-11  Score=83.57  Aligned_cols=77  Identities=17%  Similarity=0.112  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC---CCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG---IGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~---~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....     ......+..   ..+.++.+|++|++.+++.+...
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL-----SSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-----HHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999975321     112222322   36889999999999998876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus       114 ~~~~g  118 (293)
T 3rih_A          114 VDAFG  118 (293)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            34343

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.25  E-value=5.1e-11  Score=79.96  Aligned_cols=70  Identities=11%  Similarity=0.080  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC-CCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG-IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      +... ....+.. .++.++.+|++|++.+.+.+..
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD------DHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh------hHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999863      1211 1122222 2689999999999999887643

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.25  E-value=5.6e-11  Score=79.45  Aligned_cols=76  Identities=14%  Similarity=0.044  Sum_probs=57.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+.........+.++.+|++|.+.+++.+...-..
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK------AGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH------HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            3467899999999999999999999999999999974      2222222212346899999999999998876544343


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        81 ~g   82 (261)
T 3n74_A           81 FG   82 (261)
T ss_dssp             HS
T ss_pred             cC
Confidence            33

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.25  E-value=4e-11  Score=80.35  Aligned_cols=70  Identities=13%  Similarity=0.067  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+ ...+.++.+|++|++.+.+.+...
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   73 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD------EEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999963      2222 11222 235788999999999998876443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.25  E-value=4.9e-11  Score=79.02  Aligned_cols=71  Identities=14%  Similarity=0.049  Sum_probs=55.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC-CCeEEEEeeCCChhhhhHHHhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG-IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+.      +..+ ....+.. .+++++.+|++|++.+.+.+..
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS------DVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHH
Confidence            35668899999999999999999999999999999964      2221 1122221 3689999999999999887644

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.25  E-value=5.9e-11  Score=80.73  Aligned_cols=76  Identities=21%  Similarity=0.170  Sum_probs=57.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++...+.......+.++.+|++|++.+.+.+......
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA------ERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH------HHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999863      2222222222346899999999999998876544333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        77 ~g   78 (281)
T 3zv4_A           77 FG   78 (281)
T ss_dssp             HS
T ss_pred             cC
Confidence            33

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.25  E-value=3.6e-11  Score=79.63  Aligned_cols=68  Identities=9%  Similarity=0.027  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh-c--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF-Q--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l-~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+ .  ...+.++.+|++|++.+++++..
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSA------ETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAA   73 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            36899999999999999999999999999999964      2221 11122 1  23588999999999999887643

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.24  E-value=4.2e-11  Score=82.09  Aligned_cols=63  Identities=10%  Similarity=0.128  Sum_probs=48.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh-hhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG-QVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~-~~l~~~~   78 (91)
                      |+|+|||||||||++++++|+++ |++|++++|+...      ...  .....+++++++|++|. +.+.+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~------~~~--~~~~~~~~~~~~D~~~~~~~~~~~~   65 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA------ISR--FLNHPHFHFVEGDISIHSEWIEYHV   65 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG------GGG--GTTCTTEEEEECCTTTCSHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcch------HHH--hhcCCCeEEEeccccCcHHHHHhhc
Confidence            58999999999999999999998 8999999997421      111  11234789999999984 4566553

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.24  E-value=1.5e-11  Score=81.10  Aligned_cols=69  Identities=22%  Similarity=0.232  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh---cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF---QGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l---~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +++++||||+|+||++++++|+++|++|++++|+..      +.+ ....+   ....+.++.+|++|++.+.+.+...
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVD------RLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKV   74 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-H
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999742      211 11111   2346889999999999998876443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.24  E-value=3.2e-11  Score=81.50  Aligned_cols=79  Identities=15%  Similarity=0.076  Sum_probs=58.4

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..+..++++||||+|+||++++++|+++|++|++++|+..     +..+ ....+.  ...+.++.+|++|++.+.+.+.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST-----KDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            4456789999999999999999999999999999887531     1111 112222  2468899999999999998765


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      .....+|
T Consensus        89 ~~~~~~g   95 (270)
T 3is3_A           89 QAVAHFG   95 (270)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHcC
Confidence            5444444

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.24  E-value=5.4e-11  Score=79.78  Aligned_cols=71  Identities=15%  Similarity=0.136  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ..++.++.+|++|++.+++.+...
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ------KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999964      2221 112222  235788999999999998876443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.23  E-value=3.8e-11  Score=80.97  Aligned_cols=69  Identities=10%  Similarity=0.107  Sum_probs=55.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+....            ....+.++.+|++|++.+.+.+...-..+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS------------ADPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC------------SSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc------------ccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            457899999999999999999999999999999975322            12368999999999999988765443333


Q ss_pred             h
Q 037506           86 G   86 (91)
Q Consensus        86 ~   86 (91)
                      |
T Consensus        95 g   95 (260)
T 3un1_A           95 G   95 (260)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.23  E-value=3.8e-11  Score=80.34  Aligned_cols=71  Identities=13%  Similarity=0.029  Sum_probs=54.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++|+||||+|+||++++++|+++|++|++++|..     +++.+ ....+.  ...+.++.+|++|++.+.+.+..
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS-----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK   92 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc-----hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999842     12221 112222  23578999999999999887643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.23  E-value=1.8e-11  Score=82.02  Aligned_cols=75  Identities=16%  Similarity=0.140  Sum_probs=55.3

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhh-----cCCCeEEEEeeCCChhhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEF-----QGIGVTIIENLCDVGQVT   74 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l-----~~~~v~~v~gDl~d~~~l   74 (91)
                      |+-.+..+.++||||+|+||++++++|+++|++|++++|+..      +.+. ...+     ....+.++.+|++|++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   74 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQ------NLEKVHDEIMRSNKHVQEPIVLPLDITDCTKA   74 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHH------HHHHHHHHHHHHCTTSCCCEEEECCTTCHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHHhccccCcceEEeccCCCHHHH
Confidence            555566789999999999999999999999999999999742      2211 1111     114678999999999999


Q ss_pred             hHHHhhh
Q 037506           75 SSQRMRS   81 (91)
Q Consensus        75 ~~~~~~~   81 (91)
                      .+.+...
T Consensus        75 ~~~~~~~   81 (250)
T 3nyw_A           75 DTEIKDI   81 (250)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8876443

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.23  E-value=5.8e-11  Score=80.76  Aligned_cols=77  Identities=19%  Similarity=0.116  Sum_probs=57.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ++.++++||||+|+||++++++|+++|++|++++|+....     ......+.  ...+.++++|++|++++++.+....
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL-----QVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-----HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999974221     11112222  2367899999999999998765443


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus       105 ~~~g  108 (276)
T 3r1i_A          105 GELG  108 (276)
T ss_dssp             HHHS
T ss_pred             HHcC
Confidence            3333

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.23  E-value=7.3e-11  Score=80.28  Aligned_cols=76  Identities=11%  Similarity=0.007  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      +............+.++++|++|++.+++.+......
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE------DAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999864      2222222112346889999999999998876544333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        99 ~g  100 (277)
T 4dqx_A           99 WG  100 (277)
T ss_dssp             HS
T ss_pred             cC
Confidence            33

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.23  E-value=2.3e-11  Score=80.25  Aligned_cols=67  Identities=19%  Similarity=0.100  Sum_probs=51.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |++++||||+|+||++++++|+++|++|++++|+.      ++.+.........+.++.+|++|++.+++.+.
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   67 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSE------SKLSTVTNCLSNNVGYRARDLASHQEVEQLFE   67 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH------HHHHHHHHTCSSCCCEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHhhccCeEeecCCCHHHHHHHHH
Confidence            35799999999999999999999999999999974      22222221113468899999999999988753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.23  E-value=3.6e-11  Score=81.08  Aligned_cols=72  Identities=11%  Similarity=0.127  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....   +.. ..+.. ....+.++.+|++|++.+.+.+..
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~  104 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD---EKAEHLQKT-YGVHSKAYKCNISDPKSVEETISQ  104 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH---HHHHHHHHH-HCSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHh-cCCcceEEEeecCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999975321   111 11111 134688999999999999887644

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.23  E-value=4e-11  Score=82.71  Aligned_cols=63  Identities=19%  Similarity=0.270  Sum_probs=45.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      +.+|+|+|||||||||++++++|+++|++|++++|.....  .....  ......+++++.+|+.|.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~~~~D~~~~   87 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR--KRNVE--HWIGHENFELINHDVVEP   87 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--GGGTG--GGTTCTTEEEEECCTTSC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccc--hhhhh--hhccCCceEEEeCccCCh
Confidence            4568999999999999999999999999999999975322  11111  111224688888888764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.23  E-value=6.1e-11  Score=82.53  Aligned_cols=76  Identities=16%  Similarity=0.186  Sum_probs=56.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-h--cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-F--QGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l--~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      |+.+.++||||+|+||++++++|+++|++|++.+|+.... +.++.+.+.. .  ....+.++.+|++|++++.+++...
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r-~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGR-NASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTT-THHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCccccc-CHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999975332 2222222211 1  1246899999999999999876543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.23  E-value=4.3e-11  Score=81.86  Aligned_cols=77  Identities=17%  Similarity=0.136  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     ..... ..+.  ...+.++.+|++|++.+++.+...
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG-----DANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH-----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999997421     11111 1111  236889999999999998876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus       120 ~~~~g  124 (291)
T 3ijr_A          120 VRQLG  124 (291)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            33333

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.22  E-value=2.1e-11  Score=82.11  Aligned_cols=76  Identities=14%  Similarity=0.156  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.+ ....+.   ...+.++.+|++|++.+++.+..
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTA------DIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR   81 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999742      221 112222   14689999999999999887644


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-..+|
T Consensus        82 ~~~~~g   87 (262)
T 3pk0_A           82 AVEEFG   87 (262)
T ss_dssp             HHHHHS
T ss_pred             HHHHhC
Confidence            433333

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.22  E-value=4.5e-11  Score=79.03  Aligned_cols=71  Identities=18%  Similarity=0.152  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++ |+..     ........+.  ...+.++.+|++|++.+++.+..
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST-----SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKT   76 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCS-----HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHH-----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999994 4421     1111112221  23588999999999999887643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.22  E-value=2.4e-11  Score=82.39  Aligned_cols=80  Identities=14%  Similarity=0.118  Sum_probs=58.6

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |...+..+.++||||+|+||++++++|+++|++|++++|+..      ..+ ....+.  ...+.++.+|++|++.+++.
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   95 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA------GAEGIGAAFKQAGLEGRGAVLNVNDATAVDAL   95 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHH
Confidence            344456788999999999999999999999999999999642      221 111221  23578999999999999887


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +...-..+|
T Consensus        96 ~~~~~~~~g  104 (270)
T 3ftp_A           96 VESTLKEFG  104 (270)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHcC
Confidence            654433333

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.22  E-value=1.2e-11  Score=83.30  Aligned_cols=55  Identities=18%  Similarity=0.247  Sum_probs=44.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      +|+|+|||| ||||++++++|+++||+|++++|+..      +..   .+...+++++.+|++|.
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~------~~~---~~~~~~~~~~~~D~~d~   59 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPD------QME---AIRASGAEPLLWPGEEP   59 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGG------GHH---HHHHTTEEEEESSSSCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChh------hhh---hHhhCCCeEEEeccccc
Confidence            579999998 99999999999999999999999742      222   22234789999999874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.22  E-value=8e-11  Score=79.09  Aligned_cols=75  Identities=21%  Similarity=0.266  Sum_probs=57.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+.      ++...+ ..+ ...+.++.+|++|++.+++.+....
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE------SNIARIREEF-GPRVHALRSDIADLNEIAVLGAAAG   77 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHH
Confidence            35568899999999999999999999999999999964      222222 222 3468999999999999988764433


Q ss_pred             hhh
Q 037506           83 RSL   85 (91)
Q Consensus        83 ~~~   85 (91)
                      ..+
T Consensus        78 ~~~   80 (255)
T 4eso_A           78 QTL   80 (255)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            333

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.22  E-value=6.4e-11  Score=80.65  Aligned_cols=68  Identities=15%  Similarity=0.046  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+.. ..+ ...+.++.+|++|++++++.+.
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~   82 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDT------RKGEAAARTM-AGQVEVRELDLQDLSSVRRFAD   82 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHTTS-SSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHh-cCCeeEEEcCCCCHHHHHHHHH
Confidence            4457899999999999999999999999999999974      222221 222 3468999999999999988753

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.22  E-value=1.1e-10  Score=78.93  Aligned_cols=72  Identities=13%  Similarity=0.099  Sum_probs=55.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh---cCCCeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF---QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l---~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+   ....+.++.+|++|++.+++.+.
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL------EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            45567899999999999999999999999999999964      2221 11122   13357889999999999988764


Q ss_pred             hh
Q 037506           80 RS   81 (91)
Q Consensus        80 ~~   81 (91)
                      ..
T Consensus        92 ~~   93 (267)
T 1vl8_A           92 AV   93 (267)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.21  E-value=3.4e-11  Score=80.19  Aligned_cols=73  Identities=14%  Similarity=0.090  Sum_probs=55.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++.++++||||+|+||++++++|+++|++|++++|+..      +.. ....+.  ...+.++.+|++|++.+++.+...
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAE------AAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRT   80 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999642      221 112222  235788999999999998876543


Q ss_pred             hh
Q 037506           82 GR   83 (91)
Q Consensus        82 ~~   83 (91)
                      -.
T Consensus        81 ~~   82 (253)
T 3qiv_A           81 LA   82 (253)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.21  E-value=8.3e-11  Score=79.61  Aligned_cols=73  Identities=18%  Similarity=0.100  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      +..++++||||+|+||++++++|+++|++|.+++|+.      ++...........+.++.+|++|++.+++.+.....
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE------DKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999863      222222111234689999999999999887644333

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.21  E-value=4.1e-11  Score=81.20  Aligned_cols=71  Identities=13%  Similarity=0.119  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC--C---CeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG--I---GVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~--~---~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+..  .   .+.++.+|++|++.+++.+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   77 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSS------ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQII   77 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHH
Confidence            5567899999999999999999999999999999964      2221 1122221  1   5789999999999998876


Q ss_pred             hhh
Q 037506           79 MRS   81 (91)
Q Consensus        79 ~~~   81 (91)
                      ...
T Consensus        78 ~~~   80 (280)
T 1xkq_A           78 NST   80 (280)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.21  E-value=6.7e-11  Score=80.52  Aligned_cols=77  Identities=14%  Similarity=0.169  Sum_probs=56.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|..     ++... ....+.  ...+.++++|++|++.+++.+...
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD-----AEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC-----HHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            4457899999999999999999999999999999743     12221 112222  246889999999999998876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus       102 ~~~~g  106 (280)
T 4da9_A          102 VAEFG  106 (280)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            33333

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.21  E-value=1.3e-10  Score=77.86  Aligned_cols=68  Identities=12%  Similarity=0.081  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +......+.  . .++++|++|++.+++.+...
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~   71 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE------GKEVAEAIG--G-AFFQVDLEDERERVRFVEEA   71 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT------HHHHHHHHT--C-EEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh------HHHHHHHhh--C-CEEEeeCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999742      222222232  4 88999999999988876443

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.20  E-value=4.6e-11  Score=80.62  Aligned_cols=70  Identities=13%  Similarity=0.090  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+..     ...   ..+...++.++.+|++|++.+++.+.....
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH-----ASV---TELRQAGAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-----HHH---HHHHHHTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-----HHH---HHHHhcCCeEEECCCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999752     111   122223589999999999999887644333

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.20  E-value=4.6e-11  Score=79.64  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=55.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..++++||||+|+||++++++|+++|++|++++|...     ++.+ ....+.  ...+.++++|++|++++++.+....
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   77 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK-----EKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVV   77 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988531     2221 112222  2357889999999999988765443


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        78 ~~~g   81 (246)
T 3osu_A           78 SQFG   81 (246)
T ss_dssp             HHHS
T ss_pred             HHcC
Confidence            3333

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.20  E-value=7.8e-11  Score=78.78  Aligned_cols=74  Identities=11%  Similarity=-0.002  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+.      ++.+.. ..+. ....++.+|++|++++++.+......
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSE------SGAQAISDYLG-DNGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhc-ccceEEEEeCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999964      222222 2222 35788999999999999876544333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        81 ~g   82 (248)
T 3op4_A           81 FG   82 (248)
T ss_dssp             HC
T ss_pred             cC
Confidence            33

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.20  E-value=3.3e-11  Score=80.89  Aligned_cols=77  Identities=17%  Similarity=0.161  Sum_probs=58.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++.++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+++.+..
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   76 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTK------EKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ   76 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999974      2222 112222  23588999999999999887654


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus        77 ~~~~~g   82 (257)
T 3imf_A           77 IDEKFG   82 (257)
T ss_dssp             HHHHHS
T ss_pred             HHHHcC
Confidence            433333

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.20  E-value=7.1e-12  Score=83.97  Aligned_cols=60  Identities=12%  Similarity=-0.022  Sum_probs=50.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++|+|||||||||++++++|+++|++|++++|+....           . ..+++++.+|++|++.+.+++
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~-~~~~~~~~~Dl~d~~~~~~~~   61 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA-----------A-EAHEEIVACDLADAQAVHDLV   61 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC-----------C-CTTEEECCCCTTCHHHHHHHH
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc-----------c-CCCccEEEccCCCHHHHHHHH
Confidence            35899999999999999999999999999999975321           0 136789999999999888865

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.20  E-value=3.1e-11  Score=82.22  Aligned_cols=61  Identities=16%  Similarity=0.214  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ||+|+|||||||||++++++|+++| .+++++|.....     ..    ....+++++.+|++| +.+.+++
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~-----~~----~~~~~~~~~~~Dl~~-~~~~~~~   61 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGN-----EE----FVNEAARLVKADLAA-DDIKDYL   61 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCC-----GG----GSCTTEEEECCCTTT-SCCHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCC-----hh----hcCCCcEEEECcCCh-HHHHHHh
Confidence            3689999999999999999999999 555555543221     11    113478999999998 7777764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.20  E-value=8.1e-11  Score=78.66  Aligned_cols=73  Identities=11%  Similarity=0.043  Sum_probs=56.8

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+.      ++... ...+ ...+.++.+|++|++++++.+...-
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   75 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINA------EGAKAAAASI-GKKARAIAADISDPGSVKALFAEIQ   75 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH------HHHHHHHHHH-CTTEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999864      22222 1222 3468999999999999988765433


Q ss_pred             h
Q 037506           83 R   83 (91)
Q Consensus        83 ~   83 (91)
                      .
T Consensus        76 ~   76 (247)
T 3rwb_A           76 A   76 (247)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.20  E-value=4.1e-11  Score=79.54  Aligned_cols=71  Identities=13%  Similarity=0.030  Sum_probs=55.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.+ ....+.  ...+.++.+|++|++++++.+...
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQA------SAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEI   76 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999999742      221 112222  236889999999999998876443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.20  E-value=3.1e-11  Score=81.45  Aligned_cols=76  Identities=18%  Similarity=0.264  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh---cCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF---QGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l---~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.+ ....+   ....+.++++|++|++.+++.+..
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   91 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVS------ELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR   91 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999642      211 11222   234689999999999999887644


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-..+|
T Consensus        92 ~~~~~g   97 (266)
T 4egf_A           92 AAEAFG   97 (266)
T ss_dssp             HHHHHT
T ss_pred             HHHHcC
Confidence            433333

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.20  E-value=7e-11  Score=79.65  Aligned_cols=81  Identities=12%  Similarity=0.085  Sum_probs=58.6

Q ss_pred             CCCCCCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            1 MEGKNTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         1 ~~~~~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |-..+..++++||||  +|+||++++++|+++|++|++++|+...    ........+ ...+.++.+|++|++.+++.+
T Consensus         1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR----LIQRITDRL-PAKAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH----HHHHHHTTS-SSCCCEEECCTTCHHHHHHHH
T ss_pred             CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH----HHHHHHHhc-CCCceEEEccCCCHHHHHHHH
Confidence            334466788999999  9999999999999999999999986410    011111222 235788999999999998876


Q ss_pred             hhhhhhhh
Q 037506           79 MRSGRSLG   86 (91)
Q Consensus        79 ~~~~~~~~   86 (91)
                      ......+|
T Consensus        76 ~~~~~~~g   83 (269)
T 2h7i_A           76 GRVTEAIG   83 (269)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            55444444

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.20  E-value=5.6e-11  Score=80.25  Aligned_cols=71  Identities=14%  Similarity=0.053  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     .......+.  ..++.++.+|++|++.+.+.+..
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~  101 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG-----LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK  101 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHH-----HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence            445789999999999999999999999999999996421     111112221  23688999999999998887543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.20  E-value=8.6e-11  Score=78.35  Aligned_cols=72  Identities=14%  Similarity=0.121  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCCh-hhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVG-QVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~-~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++ |++++|+..    ++..+.+... ...++.++.+|++|+ +++++.+..
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~----~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN----PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK   77 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC----HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch----HHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHH
Confidence            45678999999999999999999999997 899998742    1122222221 123578899999998 888776543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.20  E-value=7.8e-11  Score=79.69  Aligned_cols=68  Identities=15%  Similarity=0.176  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+.      ++... ...+ ...+.++.+|++|++++++.+..
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~------~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   97 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA------EKGKALADEL-GNRAEFVSTNVTSEDSVLAAIEA   97 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh------HHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHH
Confidence            346799999999999999999999999999999964      22222 2223 34689999999999999987643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.19  E-value=7.8e-11  Score=77.42  Aligned_cols=59  Identities=17%  Similarity=0.141  Sum_probs=50.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++++||||+|+||++++++|+++|++|++++|+.. .              ..+.++.+|++|++.+++.+..
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~   60 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVAR   60 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHH
Confidence            368999999999999999999999999999999742 1              1458899999999999887643

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.19  E-value=4.2e-11  Score=81.57  Aligned_cols=77  Identities=13%  Similarity=0.116  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh---cCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF---QGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l---~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.     ++..+ ....+   ....+.++.+|++|++.+++.+..
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   97 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA-----PDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM   97 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC-----HHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-----hHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999853     12211 11222   134688999999999999987654


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus        98 ~~~~~g  103 (281)
T 3v2h_A           98 VADRFG  103 (281)
T ss_dssp             HHHHTS
T ss_pred             HHHHCC
Confidence            433333

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.19  E-value=7.7e-11  Score=78.44  Aligned_cols=70  Identities=20%  Similarity=0.142  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHh-CCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+++|+||||+|+||++++++|++ .|++|++++|+...     .......+.  ...+.++.+|++|.+.+.+.+..
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   75 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR-----GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF   75 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH-----HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHH-----HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999 99999999996421     111112222  23588999999999998887543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.19  E-value=1.7e-10  Score=76.88  Aligned_cols=69  Identities=10%  Similarity=0.032  Sum_probs=53.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.....  ...++.++.+|++|++.+++.+...
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   71 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE------GPLREAA--EAVGAHPVVMDVADPASVERGFAEA   71 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHH--HTTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHH--HHcCCEEEEecCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999963      2222111  1124789999999999998876443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.19  E-value=2.9e-11  Score=82.08  Aligned_cols=70  Identities=14%  Similarity=0.105  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhh---cCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEF---QGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l---~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++... ...+   ....+.++.+|++|++.+++.+..
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   99 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK------ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ   99 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999964      22211 1111   122578999999999988887543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.19  E-value=5.7e-11  Score=82.31  Aligned_cols=70  Identities=10%  Similarity=0.070  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--C--CCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--G--IGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~--~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.+ ....+.  .  ..+.++.+|++|++++.+++.
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~   79 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQD------SIDKALATLEAEGSGPEVMGVQLDVASREGFKMAAD   79 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999742      221 112221  1  268999999999999988764


Q ss_pred             h
Q 037506           80 R   80 (91)
Q Consensus        80 ~   80 (91)
                      .
T Consensus        80 ~   80 (319)
T 3ioy_A           80 E   80 (319)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.19  E-value=6.2e-11  Score=80.41  Aligned_cols=77  Identities=13%  Similarity=0.163  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     .......+   ....+.++.+|++|++.+++.+...
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   99 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPR-----VLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQA   99 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHH-----HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999997421     11111222   2346899999999999998876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus       100 ~~~~g  104 (277)
T 4fc7_A          100 LKEFG  104 (277)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            33333

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.19  E-value=9.6e-11  Score=79.78  Aligned_cols=75  Identities=9%  Similarity=0.050  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|+.      ++... ...+ ...+.++.+|++|++.+++.+.....
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG------DAADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            4457899999999999999999999999999999964      22222 2222 34689999999999999887644433


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      .+|
T Consensus       100 ~~g  102 (277)
T 3gvc_A          100 AFG  102 (277)
T ss_dssp             HHS
T ss_pred             HcC
Confidence            333

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.19  E-value=8.4e-11  Score=79.46  Aligned_cols=69  Identities=19%  Similarity=0.109  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc----CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ----GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~----~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+.      ++... ...+.    ...+.++.+|++|++.+.+.+..
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  104 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV------GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA  104 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCh------HHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999964      22211 11221    12478899999999999887643

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.19  E-value=8e-11  Score=78.79  Aligned_cols=70  Identities=20%  Similarity=0.141  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+.  ...+.++.+|++|++.+++.+..
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE------YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT   84 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999964      2211 112221  23578999999999988887643

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.19  E-value=1.3e-10  Score=78.85  Aligned_cols=70  Identities=19%  Similarity=0.129  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+++.+...
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE------EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999974      2211 112222  235788999999999998876443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.18  E-value=2.3e-11  Score=82.88  Aligned_cols=55  Identities=13%  Similarity=0.047  Sum_probs=33.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .|+|+|||||||||++++++|+++|++|++++|+..      .         .+  ++.+|++|++.+.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~------~---------~~--~~~~Dl~d~~~~~~~~   56 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA------R---------PK--FEQVNLLDSNAVHHII   56 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC------C---------CC--eEEecCCCHHHHHHHH
Confidence            368999999999999999999999999999998631      0         02  5677777777666654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.18  E-value=9.5e-11  Score=79.61  Aligned_cols=69  Identities=13%  Similarity=0.109  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..+.++||||+|+||++++++|+++|++|++++|+.      ++... ...+ ...+.++.+|++|++.+.+.+...
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRL------DALQETAAEI-GDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHH-TSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999964      22222 2222 246899999999999998876443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.18  E-value=1.2e-10  Score=78.35  Aligned_cols=63  Identities=13%  Similarity=0.130  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....            .  .+.++.+|++|++.+++.+...
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------~--~~~~~~~Dl~d~~~v~~~~~~~   81 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------E--GFLAVKCDITDTEQVEQAYKEI   81 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------T--TSEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------c--cceEEEecCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999964211            1  3688999999999998876443

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.18  E-value=7.9e-11  Score=79.93  Aligned_cols=86  Identities=13%  Similarity=0.062  Sum_probs=60.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCC----------CCcchHHHh-hhhc--CCCeEEEEee
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQN----------SRPSKLEIH-KEFQ--GIGVTIIENL   67 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~----------~~~~~~~~~-~~l~--~~~v~~v~gD   67 (91)
                      |...+..+.++||||+++||++++++|+++|++|++++|+....          .+.++.... ..+.  ...+.++.+|
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            45566778999999999999999999999999999999863210          011221111 1121  2358899999


Q ss_pred             CCChhhhhHHHhhhhhhhh
Q 037506           68 CDVGQVTSSQRMRSGRSLG   86 (91)
Q Consensus        68 l~d~~~l~~~~~~~~~~~~   86 (91)
                      ++|++.+++.+...-..+|
T Consensus        85 v~~~~~v~~~~~~~~~~~g  103 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLG  103 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHhC
Confidence            9999999987654444443

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.18  E-value=4.5e-11  Score=80.20  Aligned_cols=74  Identities=8%  Similarity=0.011  Sum_probs=55.7

Q ss_pred             CCCCeEEEEcCCc-hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTG-YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG-~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+| .||++++++|+++|++|++++|+...     .......+   ....+.++.+|++|++.+++.+..
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERR-----LGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHH-----HHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence            4567899999998 49999999999999999999997421     11111222   224689999999999999887644


Q ss_pred             hhh
Q 037506           81 SGR   83 (91)
Q Consensus        81 ~~~   83 (91)
                      .-.
T Consensus        95 ~~~   97 (266)
T 3o38_A           95 TVE   97 (266)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            333

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.18  E-value=4.7e-11  Score=80.24  Aligned_cols=71  Identities=15%  Similarity=0.125  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.. ....+.  ...+.++.+|++|++.+.+.+...
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVE------KLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999742      221 112221  235789999999999998876443

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.18  E-value=1.1e-10  Score=78.73  Aligned_cols=71  Identities=11%  Similarity=0.108  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh---c--CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF---Q--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l---~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+   .  ...+.++.+|++|++.+++.+
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   77 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHA------ERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEIL   77 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHH
Confidence            5567899999999999999999999999999999964      2221 11222   1  235789999999999998876


Q ss_pred             hhh
Q 037506           79 MRS   81 (91)
Q Consensus        79 ~~~   81 (91)
                      ...
T Consensus        78 ~~~   80 (278)
T 1spx_A           78 STT   80 (278)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.18  E-value=1.5e-10  Score=78.32  Aligned_cols=69  Identities=17%  Similarity=0.139  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+.. ..+  .++.++++|++|++.+++.+...
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~   76 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE------SGGRALEQEL--PGAVFILCDVTQEDDVKTLVSET   76 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHh--cCCeEEEcCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999963      222211 222  25789999999999998876443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.18  E-value=5.7e-11  Score=79.78  Aligned_cols=76  Identities=12%  Similarity=0.087  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..      +.+ ....+.  ...+.++.+|++|++.+++.+...
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSE------GAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999642      211 112222  246889999999999998876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus        84 ~~~~g   88 (256)
T 3gaf_A           84 LDQFG   88 (256)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            33333

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.18  E-value=1.1e-10  Score=78.19  Aligned_cols=73  Identities=11%  Similarity=0.063  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...    ........+.   ...+.++.+|++|++.+++.+...
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   77 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA----EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA   77 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH----HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch----HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999987421    0111112221   336888999999999998876443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.17  E-value=8.7e-11  Score=79.48  Aligned_cols=86  Identities=13%  Similarity=0.025  Sum_probs=58.9

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCC-------CCcchHHH-hhhhc--CCCeEEEEeeCCC
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQN-------SRPSKLEI-HKEFQ--GIGVTIIENLCDV   70 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-------~~~~~~~~-~~~l~--~~~v~~v~gDl~d   70 (91)
                      |...+..+.++||||+++||++++++|+++|++|++++|.....       .+++.... ...+.  ...+.++.+|++|
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            44556778999999999999999999999999999999852210       01111111 11111  2468899999999


Q ss_pred             hhhhhHHHhhhhhhhh
Q 037506           71 GQVTSSQRMRSGRSLG   86 (91)
Q Consensus        71 ~~~l~~~~~~~~~~~~   86 (91)
                      ++.+++.+...-..+|
T Consensus        85 ~~~v~~~~~~~~~~~g  100 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALG  100 (277)
T ss_dssp             HHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHcC
Confidence            9999987654433333

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.17  E-value=1.2e-10  Score=78.13  Aligned_cols=69  Identities=13%  Similarity=0.115  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+.  ...+.++.+|++|++.+++.+.
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHL------DTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFE   74 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999863      2221 112221  2357889999999999988753

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.17  E-value=4.4e-11  Score=81.10  Aligned_cols=69  Identities=19%  Similarity=0.117  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCCh-hhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVG-QVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~-~~l~~~~~   79 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+...     .......+.   ...+.++.+|++|+ +.+++.+.
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~   83 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTK-----GHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLAD   83 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHH
Confidence            45689999999999999999999999999999997421     111122222   23689999999998 87777653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.17  E-value=7.9e-11  Score=78.19  Aligned_cols=68  Identities=15%  Similarity=0.159  Sum_probs=51.4

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+-....++++||||+|+||++++++|+++|++|++++|+....            . ....++.+|++|++.+++.+..
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------------~-~~~~~~~~D~~~~~~v~~~~~~   67 (241)
T 1dhr_A            1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------A-SASVIVKMTDSFTEQADQVTAE   67 (241)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------S-SEEEECCCCSCHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc------------c-CCcEEEEcCCCCHHHHHHHHHH
Confidence            43344567899999999999999999999999999999975321            0 1356788999999988887644


Q ss_pred             h
Q 037506           81 S   81 (91)
Q Consensus        81 ~   81 (91)
                      .
T Consensus        68 ~   68 (241)
T 1dhr_A           68 V   68 (241)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.17  E-value=9.9e-11  Score=80.24  Aligned_cols=86  Identities=15%  Similarity=0.115  Sum_probs=60.9

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCC------CCcchHH-Hhhhhc--CCCeEEEEeeCCCh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQN------SRPSKLE-IHKEFQ--GIGVTIIENLCDVG   71 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~------~~~~~~~-~~~~l~--~~~v~~v~gDl~d~   71 (91)
                      |...+..+.++||||+++||++++++|+++|++|++++|+....      .++++.. ....+.  ...+.++.+|++|+
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF  101 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence            55667778999999999999999999999999999999873210      0111111 111121  24688999999999


Q ss_pred             hhhhHHHhhhhhhhh
Q 037506           72 QVTSSQRMRSGRSLG   86 (91)
Q Consensus        72 ~~l~~~~~~~~~~~~   86 (91)
                      +.+.+.+......+|
T Consensus       102 ~~v~~~~~~~~~~~g  116 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLG  116 (299)
T ss_dssp             HHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999987654433333

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.17  E-value=1.3e-10  Score=77.42  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|..     +++.+ ....+.  ...+.++.+|++|++.+++.+...
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGN-----EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQT   76 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999832     12221 112221  235788999999999998876443

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.17  E-value=7.2e-11  Score=79.06  Aligned_cols=71  Identities=14%  Similarity=0.119  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+++.+...
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ------ENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMA   85 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999964      2211 112222  235788999999999888876433

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.17  E-value=4.5e-11  Score=80.45  Aligned_cols=75  Identities=16%  Similarity=0.190  Sum_probs=55.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..++++||||+|+||++++++|+++|++|+++ .|+.      +... ....+.  ...+.++.+|++|++.+++.+...
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK------KAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQI   76 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCH------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCH------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999987 5653      2211 112222  236889999999999999876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus        77 ~~~~g   81 (258)
T 3oid_A           77 DETFG   81 (258)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            44444

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.17  E-value=7.4e-11  Score=80.14  Aligned_cols=75  Identities=13%  Similarity=0.098  Sum_probs=55.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcC-CCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQG-IGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      |. ++++||||+|+||++++++|+++|++|++++|+.      ++.+. ...+.. ..+.++.+|++|++.+++.+....
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRRE------ERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            44 7899999999999999999999999999999963      22221 122221 368899999999999998764433


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        93 ~~~g   96 (272)
T 2nwq_A           93 EEFA   96 (272)
T ss_dssp             GGGS
T ss_pred             HHhC
Confidence            3333

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.17  E-value=1e-10  Score=80.27  Aligned_cols=71  Identities=7%  Similarity=-0.023  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++++++.+...
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~  102 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPA-----LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEA  102 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            45689999999999999999999999999999997421     111112222  236889999999999998876443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.17  E-value=1.8e-10  Score=77.02  Aligned_cols=70  Identities=11%  Similarity=-0.002  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..       ......+.  ...+.++.+|++|++.+++.+...
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   73 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-------APALAEIARHGVKAVHHPADLSDVAQIEALFALA   73 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-------HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-------HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999998742       11112222  235788999999999998876443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.17  E-value=7.5e-11  Score=78.94  Aligned_cols=75  Identities=11%  Similarity=-0.020  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeC--CChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLC--DVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl--~d~~~l~~~~~~~   81 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|+....  .+....+.......+.++.+|+  +|++.+++.+...
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKL--RQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999974211  0001111111223678999999  8898888876443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.16  E-value=4.8e-11  Score=81.32  Aligned_cols=74  Identities=15%  Similarity=0.105  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh---cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF---QGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l---~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..+.++||||+|+||++++++|+++|++|++++|+..      +.+ ....+   ....+.++.+|++|++++++.+...
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  105 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPD------VLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV  105 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999742      211 11122   1223589999999999998876444


Q ss_pred             hhhh
Q 037506           82 GRSL   85 (91)
Q Consensus        82 ~~~~   85 (91)
                      ...+
T Consensus       106 ~~~~  109 (281)
T 4dry_A          106 RAEF  109 (281)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            3333

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.16  E-value=9e-11  Score=79.19  Aligned_cols=71  Identities=17%  Similarity=0.142  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..     +..+.+ ..+.  ...+.++.+|++|++.+.+.+..
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNA-----EVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999632     221111 1121  23689999999999998887644

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.16  E-value=2e-10  Score=77.53  Aligned_cols=63  Identities=10%  Similarity=-0.009  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...              ..++.++.+|++|++.+++.+...
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~   68 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHI   68 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999997421              235788999999999998876443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.16  E-value=1.1e-10  Score=84.67  Aligned_cols=71  Identities=15%  Similarity=0.198  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC---CCcEEEEecCCCCCCCcchHHHh-h--------------hhcCCCeEEEEe
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS---GHNTFVYARPVTQNSRPSKLEIH-K--------------EFQGIGVTIIEN   66 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~---g~~V~~~~R~~~~~~~~~~~~~~-~--------------~l~~~~v~~v~g   66 (91)
                      ..+|+|+|||||||||++++++|++.   |++|++++|.....   .....+ .              .....+++++.+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE---DARRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH---HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH---HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            35689999999999999999999998   89999999975311   001110 1              111257999999


Q ss_pred             eCC------ChhhhhHHH
Q 037506           67 LCD------VGQVTSSQR   78 (91)
Q Consensus        67 Dl~------d~~~l~~~~   78 (91)
                      |++      |.+.+.+.+
T Consensus       148 Dl~~~~~gld~~~~~~~~  165 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLA  165 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHH
T ss_pred             ECCCcccCCCHHHHHHHH
Confidence            998      445565543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.16  E-value=1.2e-10  Score=78.53  Aligned_cols=71  Identities=14%  Similarity=0.149  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec-CCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCCh----hhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVG----QVTS   75 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~----~~l~   75 (91)
                      |..++++||||+|+||++++++|+++|++|++++| +.      ++.+ ....+.   ...+.++.+|++|+    +.+.
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   82 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE------GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCE   82 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH------HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCh------HHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHH
Confidence            45578999999999999999999999999999999 53      2221 112221   34688999999999    8887


Q ss_pred             HHHhhh
Q 037506           76 SQRMRS   81 (91)
Q Consensus        76 ~~~~~~   81 (91)
                      +.+...
T Consensus        83 ~~~~~~   88 (276)
T 1mxh_A           83 DIIDCS   88 (276)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            765433

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.16  E-value=1.9e-10  Score=76.85  Aligned_cols=64  Identities=13%  Similarity=-0.002  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...             ...++.++.+|++|++.+.+.+...
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~~   68 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------------EQYPFATEVMDVADAAQVAQVCQRL   68 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------------SCCSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------------hcCCceEEEcCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999997421             1114788999999999998876443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.16  E-value=8.3e-11  Score=79.92  Aligned_cols=75  Identities=11%  Similarity=0.108  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..+.++||||+|+||++++++|+++|++|++++|+.      ++.. ....+.  ...+.++.+|++|++.+++.+....
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA------KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAV   96 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999964      2221 122222  2368899999999999988765443


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        97 ~~~g  100 (279)
T 3sju_A           97 ERFG  100 (279)
T ss_dssp             HHHC
T ss_pred             HHcC
Confidence            3333

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.16  E-value=1.7e-10  Score=76.62  Aligned_cols=69  Identities=16%  Similarity=0.028  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ...++|+||||+|+||++++++|+++|++|++++|+.      ++.+.........+.++.+|++|.+.+.+.+.
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   80 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE------EKLKSLGNALKDNYTIEVCNLANKEECSNLIS   80 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCSSEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH------HHHHHHHHHhccCccEEEcCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999963      22222222123478999999999999888753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.16  E-value=1.9e-10  Score=76.91  Aligned_cols=73  Identities=14%  Similarity=0.129  Sum_probs=54.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      ++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+.+.+...-..
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYND------ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT   76 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999964      2221 112221  235788999999999998876543333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        77 ~g   78 (256)
T 1geg_A           77 LG   78 (256)
T ss_dssp             TT
T ss_pred             hC
Confidence            33

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.15  E-value=1.6e-10  Score=78.47  Aligned_cols=70  Identities=13%  Similarity=0.113  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||+++++.|+++|++|+++.|+.      ++.+ ....+.  ...+.++.+|++|++.+++.+..
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  114 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ------KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK  114 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCH------HHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999988763      2221 112222  23578899999999999887643

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.15  E-value=1.4e-11  Score=79.62  Aligned_cols=58  Identities=14%  Similarity=0.053  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +|+|+|||||||||++++++|+++|+  +|++++|+...             ...+++++.+|++|++.+.++
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------------~~~~~~~~~~D~~~~~~~~~~   64 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRLDNPVGPLAELLPQLDG   64 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTEECCBSCHHHHGGGCCS
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------------cCCCceEEeccccCHHHHHHh
Confidence            46899999999999999999999998  99999997531             123567777888777666554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.15  E-value=1.2e-10  Score=78.49  Aligned_cols=77  Identities=16%  Similarity=0.138  Sum_probs=57.3

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhh----cCCCeEEEEeeCCChhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEF----QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l----~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+..+.++||||+|+||++++++|+++|++|++++|+..      +.+ ....+    ....+.++.+|++|++.+.+.+
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~   78 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGE------RLRAAESALRQRFPGARLFASVCDVLDALQVRAFA   78 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHH
Confidence            356688999999999999999999999999999999742      211 11222    1224889999999999998876


Q ss_pred             hhhhhhhh
Q 037506           79 MRSGRSLG   86 (91)
Q Consensus        79 ~~~~~~~~   86 (91)
                      ......+|
T Consensus        79 ~~~~~~~g   86 (265)
T 3lf2_A           79 EACERTLG   86 (265)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHcC
Confidence            54433333

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.15  E-value=7.5e-11  Score=79.96  Aligned_cols=76  Identities=17%  Similarity=0.150  Sum_probs=56.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+++.+...
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   75 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQ------ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAA   75 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999974      2221 112222  235788899999999998876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus        76 ~~~~g   80 (264)
T 3tfo_A           76 VDTWG   80 (264)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            33333

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.15  E-value=2.1e-10  Score=77.08  Aligned_cols=79  Identities=11%  Similarity=0.104  Sum_probs=57.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .+..++++||||+|+||++++++|+++|++|+++++....    ........+.  ...+.++.+|++|++++++.+...
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAE----GAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCH----HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            3566899999999999999999999999999998654321    1111122222  235789999999999999876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus        81 ~~~~g   85 (259)
T 3edm_A           81 ADKFG   85 (259)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            44333

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.15  E-value=2e-10  Score=76.46  Aligned_cols=66  Identities=11%  Similarity=0.007  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++......+  .++.++.+|++|++.+++..
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   69 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE------SKLQELEKY--PGIQTRVLDVTKKKQIDQFA   69 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHGGGGGS--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHhc--cCceEEEeeCCCHHHHHHHH
Confidence            5568899999999999999999999999999999963      222211211  26889999999999888553

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.15  E-value=1.3e-10  Score=78.43  Aligned_cols=82  Identities=15%  Similarity=0.094  Sum_probs=57.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC------CcchHHH-hhhh--cCCCeEEEEeeCCChhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS------RPSKLEI-HKEF--QGIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~~~~~~~-~~~l--~~~~v~~v~gDl~d~~~l~   75 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.....      ..+.... ...+  ....+.++.+|++|++.+.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            45678999999999999999999999999999998732210      0111111 1111  1346889999999999998


Q ss_pred             HHHhhhhhhhh
Q 037506           76 SQRMRSGRSLG   86 (91)
Q Consensus        76 ~~~~~~~~~~~   86 (91)
                      +.+...-..+|
T Consensus        88 ~~~~~~~~~~g   98 (287)
T 3pxx_A           88 RELANAVAEFG   98 (287)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHcC
Confidence            87654433333

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.15  E-value=1.3e-10  Score=78.43  Aligned_cols=83  Identities=16%  Similarity=0.054  Sum_probs=58.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC------CcchHHH-hhhh--cCCCeEEEEeeCCChhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS------RPSKLEI-HKEF--QGIGVTIIENLCDVGQVT   74 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~~~~~~~-~~~l--~~~~v~~v~gDl~d~~~l   74 (91)
                      .+..++++||||+|+||++++++|+++|++|++++|+.....      +++.... ...+  ....+.++.+|++|++.+
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            355688999999999999999999999999999998732100      0111111 1111  124689999999999999


Q ss_pred             hHHHhhhhhhhh
Q 037506           75 SSQRMRSGRSLG   86 (91)
Q Consensus        75 ~~~~~~~~~~~~   86 (91)
                      ++.+......+|
T Consensus        90 ~~~~~~~~~~~g  101 (278)
T 3sx2_A           90 SAALQAGLDELG  101 (278)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcC
Confidence            987654433333

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.14  E-value=2.6e-10  Score=77.09  Aligned_cols=70  Identities=14%  Similarity=0.139  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ...+.++.+|++|++.+.+.+...
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   92 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE------KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV   92 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999974      2221 112221  235789999999999998876443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.14  E-value=1.4e-10  Score=79.59  Aligned_cols=71  Identities=11%  Similarity=0.144  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CC---CeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GI---GVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~---~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.      ++.+ ....+.  ..   .+.++.+|++|++.+++.+
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~   97 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE------DRLEETKQQILKAGVPAEKINAVVADVTEASGQDDII   97 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHH
Confidence            3457899999999999999999999999999999964      2221 112221  11   5789999999999998876


Q ss_pred             hhh
Q 037506           79 MRS   81 (91)
Q Consensus        79 ~~~   81 (91)
                      ...
T Consensus        98 ~~~  100 (297)
T 1xhl_A           98 NTT  100 (297)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.14  E-value=1.6e-10  Score=78.50  Aligned_cols=69  Identities=13%  Similarity=0.163  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC-CCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG-IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..++++||||+|+||++++++|+++|++|++++|+.      ++.. ....+.. .++.++.+|++|++.+++.+..
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~   98 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDA------EACADTATRLSAYGDCQAIPADLSSEAGARRLAQA   98 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH------HHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999864      2221 1122221 2578899999999999887643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.14  E-value=4.9e-11  Score=84.83  Aligned_cols=68  Identities=18%  Similarity=0.265  Sum_probs=47.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh------------hhhcCCCeEEEEeeCCChh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH------------KEFQGIGVTIIENLCDVGQ   72 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~------------~~l~~~~v~~v~gDl~d~~   72 (91)
                      +.+++|+|||||||||++++++|++.|++|++++|+....   +....+            ......+++++.+|++|++
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE---IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHH---HHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChH---HHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            3456899999999999999999999999999999975311   011100            0111357999999999977


Q ss_pred             hhh
Q 037506           73 VTS   75 (91)
Q Consensus        73 ~l~   75 (91)
                      .+.
T Consensus       144 ~l~  146 (427)
T 4f6c_A          144 DVV  146 (427)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            665

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.14  E-value=2.3e-10  Score=77.31  Aligned_cols=78  Identities=12%  Similarity=-0.033  Sum_probs=56.4

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..++++||||+  |+||++++++|+++|++|++++|+.. .  .+....+... ...+.++.+|++|++.+++.+....
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~--~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L--EKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T--HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H--HHHHHHHHHh-cCCcEEEEcCCCCHHHHHHHHHHHH
Confidence            456789999999  99999999999999999999999753 1  1112111111 1247889999999999988764433


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        80 ~~~g   83 (275)
T 2pd4_A           80 KDLG   83 (275)
T ss_dssp             HHTS
T ss_pred             HHcC
Confidence            3333

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.14  E-value=1.5e-10  Score=77.51  Aligned_cols=66  Identities=15%  Similarity=0.168  Sum_probs=52.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+++||||+|+||++++++|+++|++|++++|+.      ++... ...+. ..+.++.+|++|++.+++.+..
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~   67 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ------ERLQELKDELG-DNLYIAQLDVRNRAAIEEMLAS   67 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHH
Confidence            4799999999999999999999999999999963      22221 12222 3688999999999999887643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.14  E-value=8.7e-11  Score=80.42  Aligned_cols=78  Identities=17%  Similarity=0.178  Sum_probs=56.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhh-hh--cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHK-EF--QGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~l--~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++.+|+..    ....+... .+  ....+.++.+|++|++.+++.+...
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE----EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG----HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc----hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999988631    11111111 11  1246889999999999998876444


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus       123 ~~~~g  127 (294)
T 3r3s_A          123 REALG  127 (294)
T ss_dssp             HHHHT
T ss_pred             HHHcC
Confidence            33333

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.14  E-value=1.1e-10  Score=79.12  Aligned_cols=77  Identities=14%  Similarity=0.100  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..     ...+ ....+.  ...+.++.+|++|++.+.+.+...
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST-----ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-----HHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999998741     1111 112222  235788999999999988876443


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus       102 ~~~~g  106 (283)
T 1g0o_A          102 VKIFG  106 (283)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            33333

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.14  E-value=1.5e-10  Score=78.41  Aligned_cols=77  Identities=10%  Similarity=0.058  Sum_probs=56.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|...     +..+ ....+.  ...+.++.+|++|++.+++.+...
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA-----GAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCCh-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            44578999999999999999999999999999998531     2211 112221  236789999999999999876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus       101 ~~~~g  105 (269)
T 4dmm_A          101 IERWG  105 (269)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            33333

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.13  E-value=1.2e-10  Score=78.44  Aligned_cols=75  Identities=13%  Similarity=0.107  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      .++.++||||+|+||++++++|+++|++|+++.+..     ++..+. ...+.  ...+.++.+|++|++++++.+....
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   99 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN-----REAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVD   99 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC-----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            356799999999999999999999999998875432     122211 11221  2357899999999999988764443


Q ss_pred             hhh
Q 037506           83 RSL   85 (91)
Q Consensus        83 ~~~   85 (91)
                      ..+
T Consensus       100 ~~~  102 (272)
T 4e3z_A          100 RQF  102 (272)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            333

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.13  E-value=6.1e-11  Score=79.98  Aligned_cols=74  Identities=19%  Similarity=0.135  Sum_probs=54.9

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~   76 (91)
                      |.-.+..++++||||+|+||++++++|+++|++|++++|+...     .......+.    ...+.++.+|++|++.+.+
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   78 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREEN-----VNETIKEIRAQYPDAILQPVVADLGTEQGCQD   78 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHH-----HHHHHHHHHHHCTTCEEEEEECCTTSHHHHHH
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhhCCCceEEEEecCCCCHHHHHH
Confidence            3334556889999999999999999999999999999997421     111112221    2346789999999998887


Q ss_pred             HHh
Q 037506           77 QRM   79 (91)
Q Consensus        77 ~~~   79 (91)
                      .+.
T Consensus        79 ~~~   81 (267)
T 3t4x_A           79 VIE   81 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.13  E-value=9.6e-11  Score=77.47  Aligned_cols=62  Identities=13%  Similarity=0.194  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.++++||||+|+||++++++|+++|++|++++|+....            . ....++.+|++|++.+.+.+..
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~------------~-~~~~~~~~D~~~~~~~~~~~~~   63 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------A-DSNILVDGNKNWTEQEQSILEQ   63 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------S-SEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc------------c-cccEEEeCCCCCHHHHHHHHHH
Confidence            456899999999999999999999999999999975321            0 1356778999999988876543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.13  E-value=1.9e-10  Score=77.89  Aligned_cols=82  Identities=10%  Similarity=0.020  Sum_probs=57.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC-------CcchHHHh-hhhc--CCCeEEEEeeCCChhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS-------RPSKLEIH-KEFQ--GIGVTIIENLCDVGQVT   74 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-------~~~~~~~~-~~l~--~~~v~~v~gDl~d~~~l   74 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|......       ++++.+.. ..+.  ...+.++.+|++|++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            45678999999999999999999999999999998531100       11222111 1122  23578899999999999


Q ss_pred             hHHHhhhhhhhh
Q 037506           75 SSQRMRSGRSLG   86 (91)
Q Consensus        75 ~~~~~~~~~~~~   86 (91)
                      ++.+...-..+|
T Consensus        93 ~~~~~~~~~~~g  104 (280)
T 3pgx_A           93 RELVADGMEQFG  104 (280)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcC
Confidence            987654433333

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.13  E-value=2.4e-10  Score=76.79  Aligned_cols=73  Identities=7%  Similarity=-0.093  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+  |+||++++++|+++|++|++++|+. ..  .+....+... .....++.+|++|++.+++.+...
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~--~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL--KGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAEL   81 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT--HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH--HHHHHHHHHh-cCCcEEEEccCCCHHHHHHHHHHH
Confidence            345789999999  9999999999999999999999975 11  1112111111 123478999999999998876443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.12  E-value=3.4e-10  Score=76.62  Aligned_cols=69  Identities=13%  Similarity=0.079  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      ...++|+||||+|+||++++++|+++|++|++++|+....             ......+++|++|++.+.+.+......
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------------VNVSDHFKIDVTNEEEVKEAVEKTTKK   78 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------------TTSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------------cCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999975211             114678999999999998876544333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        79 ~g   80 (269)
T 3vtz_A           79 YG   80 (269)
T ss_dssp             HS
T ss_pred             cC
Confidence            33

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.12  E-value=2.4e-10  Score=76.18  Aligned_cols=77  Identities=12%  Similarity=0.137  Sum_probs=54.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ...++|+||||+|+||++++++|+++|++|+++++.....    .......+.  ...+.++.+|++|.+++++.+...-
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPR----RVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSS----HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHH----HHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999988543221    111122221  2368899999999999988764433


Q ss_pred             hhh
Q 037506           83 RSL   85 (91)
Q Consensus        83 ~~~   85 (91)
                      ..+
T Consensus        87 ~~~   89 (256)
T 3ezl_A           87 AEV   89 (256)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            333

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.12  E-value=3e-10  Score=77.01  Aligned_cols=77  Identities=13%  Similarity=0.132  Sum_probs=56.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..     ++.+ ....+.  ...+.++.+|++|++.+++.+...
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA-----ERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999977531     1111 112222  236789999999999998876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus       104 ~~~~g  108 (271)
T 3v2g_A          104 VEALG  108 (271)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            34333

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.12  E-value=2e-10  Score=77.14  Aligned_cols=76  Identities=13%  Similarity=0.010  Sum_probs=55.3

Q ss_pred             CCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .+..++++||||+  |+||++++++|+++|++|++++|+.. .  .+..+.+... ...+.++.+|++|++.+++.+...
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~--~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-L--RPEAEKLAEA-LGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-G--HHHHHHHHHH-TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-H--HHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHHH
Confidence            3556789999999  99999999999999999999999742 0  0111111111 124789999999999998876443


Q ss_pred             hh
Q 037506           82 GR   83 (91)
Q Consensus        82 ~~   83 (91)
                      ..
T Consensus        81 ~~   82 (261)
T 2wyu_A           81 KE   82 (261)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.12  E-value=5.3e-10  Score=76.78  Aligned_cols=79  Identities=20%  Similarity=0.163  Sum_probs=59.9

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |..+...|.++||||++.||+.+++.|.++|++|.+.+|+.      ++.+ ...++ ...+..+++|++|++.+++.+.
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~------~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~   95 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRK------DVLDAAIAEI-GGGAVGIQADSANLAELDRLYE   95 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHH
Confidence            44455667899999999999999999999999999999974      2222 22333 3467889999999999998875


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      .....+|
T Consensus        96 ~~~~~~G  102 (273)
T 4fgs_A           96 KVKAEAG  102 (273)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHcC
Confidence            5555555

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.12  E-value=2.2e-10  Score=77.56  Aligned_cols=82  Identities=16%  Similarity=0.117  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC------CcchHH-Hhhhhc--CCCeEEEEeeCCChhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS------RPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~   75 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+.....      ..+... ....+.  ...+.++.+|++|++.++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            45678999999999999999999999999999999742110      011111 111111  246889999999999999


Q ss_pred             HHHhhhhhhhh
Q 037506           76 SQRMRSGRSLG   86 (91)
Q Consensus        76 ~~~~~~~~~~~   86 (91)
                      +.+...-..+|
T Consensus        88 ~~~~~~~~~~g   98 (281)
T 3s55_A           88 SFVAEAEDTLG   98 (281)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHhcC
Confidence            87654433333

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.12  E-value=1.8e-10  Score=77.49  Aligned_cols=72  Identities=11%  Similarity=0.046  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|+++.+..     .+.. .....+.  ...+.++.+|++|++++.+.+...
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   98 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD-----AAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE   98 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc-----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999998877543     1111 1112221  246899999999999998876443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.11  E-value=4.1e-10  Score=76.22  Aligned_cols=82  Identities=12%  Similarity=0.139  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-cchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-PSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|.++|++|++++|+...... .+.. .....+.  ...+.++.+|++|++++++.+..
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            456889999999999999999999999999999998643200 0001 1111111  33578899999999999887654


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus        84 ~~~~~g   89 (274)
T 3e03_A           84 TVDTFG   89 (274)
T ss_dssp             HHHHHS
T ss_pred             HHHHcC
Confidence            433333

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.11  E-value=3.3e-10  Score=75.83  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=55.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      .++++||||+|+||++++++|+++|++|++++|+....   ........+.  ...+.++.+|++|++.+++.+...-..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEE---QAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHH---HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999864210   0111112222  235789999999999998876443333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        79 ~g   80 (258)
T 3a28_C           79 LG   80 (258)
T ss_dssp             HT
T ss_pred             hC
Confidence            33

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.11  E-value=1.6e-10  Score=77.83  Aligned_cols=75  Identities=12%  Similarity=0.032  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +.++.++||||+|+||++++++|+++|++|++++|...     +... ....+.  ...+.++.+|++|++.+++.+...
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN-----DHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKV   97 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCH-----HHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCch-----HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            34567999999999999999999999999999986431     1111 111121  246899999999999998876544


Q ss_pred             hhh
Q 037506           82 GRS   84 (91)
Q Consensus        82 ~~~   84 (91)
                      -..
T Consensus        98 ~~~  100 (269)
T 3gk3_A           98 LAD  100 (269)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            333

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.11  E-value=2e-10  Score=78.37  Aligned_cols=76  Identities=18%  Similarity=0.126  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      ..+.++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++++|++|++.+++.+.....
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTE-----VEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHH-----HHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999997421     111222222  23578999999999999887654433


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      .+|
T Consensus       102 ~~g  104 (283)
T 3v8b_A          102 KFG  104 (283)
T ss_dssp             HHS
T ss_pred             HhC
Confidence            333

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.11  E-value=5.6e-10  Score=75.84  Aligned_cols=72  Identities=7%  Similarity=-0.001  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....  .+....+.. ....+.++.+|++|++.+.+.+.
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~  102 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST--AAVQQRIIA-SGGTAQELAGDLSEAGAGTDLIE  102 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT--HHHHHHHHH-TTCCEEEEECCTTSTTHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH--HHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999975432  111111111 13468899999999998888753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.11  E-value=9.8e-11  Score=79.65  Aligned_cols=57  Identities=14%  Similarity=0.096  Sum_probs=47.5

Q ss_pred             eEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +|+|||||||||++++++|+++  |++|++++|.....              .+++++.+|++|++.+.+++.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------~~~~~~~~D~~d~~~~~~~~~   59 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT--------------GGIKFITLDVSNRDEIDRAVE   59 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC--------------TTCCEEECCTTCHHHHHHHHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc--------------cCceEEEecCCCHHHHHHHHh
Confidence            5899999999999999999998  89999999864211              046788999999988888753

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.11  E-value=5.1e-10  Score=76.24  Aligned_cols=82  Identities=18%  Similarity=0.240  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-c-chHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-P-SKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~-~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|+...... . ........+.  ...+.++++|++|++++++.+..
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999998643200 0 0111111121  23688999999999999887654


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-..+|
T Consensus        87 ~~~~~g   92 (285)
T 3sc4_A           87 TVEQFG   92 (285)
T ss_dssp             HHHHHS
T ss_pred             HHHHcC
Confidence            433333

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.11  E-value=4.5e-10  Score=76.17  Aligned_cols=74  Identities=14%  Similarity=-0.069  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcCCch--HHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGY--LGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..++++||||+|+  ||++++++|+++|++|++++|+.  .  .+..+.+... ...+.++.+|++|++++++.+....
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~--~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--F--KDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--C--HHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--H--HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHHHH
Confidence            44578999999977  99999999999999999999975  1  1222222111 1258999999999999998764443


Q ss_pred             h
Q 037506           83 R   83 (91)
Q Consensus        83 ~   83 (91)
                      .
T Consensus        99 ~   99 (280)
T 3nrc_A           99 K   99 (280)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.10  E-value=2.5e-10  Score=85.48  Aligned_cols=64  Identities=9%  Similarity=0.156  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhh-hhHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQV-TSSQ   77 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~-l~~~   77 (91)
                      .+|+|+|||||||||++++++|+++ |++|++++|+....      .  ......+++++.+|++|.+. +.+.
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~------~--~~~~~~~v~~v~~Dl~d~~~~~~~~  379 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI------S--RFLNHPHFHFVEGDISIHSEWIEYH  379 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT------G--GGTTCTTEEEEECCTTTCHHHHHHH
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh------h--hhccCCceEEEECCCCCcHHHHHHh
Confidence            4578999999999999999999998 89999999975321      1  11123478999999999765 5544

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.10  E-value=3.4e-10  Score=76.26  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..+.++||||+++||++++++|+++|++|++++|....   .++.+ ....+.  ...+.++.+|++|++++++.+...
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKD---SDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGG---HHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccC---HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999885321   11221 112222  235788999999999999876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus        86 ~~~~g   90 (262)
T 3ksu_A           86 EKEFG   90 (262)
T ss_dssp             HHHHC
T ss_pred             HHHcC
Confidence            33333

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.10  E-value=2.4e-10  Score=75.34  Aligned_cols=67  Identities=16%  Similarity=0.158  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHH-hhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++++||||+|+||++++++|+++|++|+++ .|+.      ++.+. ...+.  ...+.++.+|++|++.+++.+..
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA------KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKT   72 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH------HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH------HHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHH
Confidence            679999999999999999999999999995 5653      22211 11121  23578899999999999887643

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.10  E-value=1.5e-10  Score=76.32  Aligned_cols=67  Identities=15%  Similarity=0.133  Sum_probs=50.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHH-hhhhc--CCCeEE-EEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEI-HKEFQ--GIGVTI-IENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~l~--~~~v~~-v~gDl~d~~~l~~~~~~   80 (91)
                      ++|+||||+|+||++++++|+++|++|+++ .|+.      ++.+. ...+.  ...+.+ +.+|++|++.+++.+..
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNR------EKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQ   73 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCH------HHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH------HHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Confidence            689999999999999999999999999998 6753      22211 12221  234566 89999999998887543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.10  E-value=5.3e-10  Score=74.60  Aligned_cols=63  Identities=17%  Similarity=0.143  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....         .     .+..+.+|++|++.+++.+...
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------~-----~~~~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------K-----GLFGVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------T-----TSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---------H-----HhcCeeccCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999975321         1     1123889999999988876443

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.10  E-value=1e-10  Score=79.39  Aligned_cols=73  Identities=14%  Similarity=0.138  Sum_probs=55.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++.+.+.+....
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR-----VAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH-----HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            445789999999999999999999999999999986421     111122222  2368899999999999988765433

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.10  E-value=2.5e-10  Score=75.60  Aligned_cols=75  Identities=15%  Similarity=0.036  Sum_probs=53.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeC--CChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLC--DVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl--~d~~~l~~~~~~~   81 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....  .+....+.........++.+|+  +|.+.+.+.+...
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASL--AEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHH--HHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999974211  0001111111224577888888  8888888875443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.10  E-value=2.3e-10  Score=76.57  Aligned_cols=71  Identities=14%  Similarity=0.104  Sum_probs=54.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHh---CCCcEEEEecCCCCCCCcchHH-Hhhhhc----CCCeEEEEeeCCChhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVS---SGHNTFVYARPVTQNSRPSKLE-IHKEFQ----GIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~~~~-~~~~l~----~~~v~~v~gDl~d~~~l~   75 (91)
                      .+..++++||||+|+||++++++|++   +|++|++++|+.      ++.. ....+.    ...+.++.+|++|++.++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~   76 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE------SMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH------HHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCH------HHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHH
Confidence            45667899999999999999999999   899999999964      2211 112221    235788999999999998


Q ss_pred             HHHhh
Q 037506           76 SQRMR   80 (91)
Q Consensus        76 ~~~~~   80 (91)
                      +.+..
T Consensus        77 ~~~~~   81 (259)
T 1oaa_A           77 RLLSA   81 (259)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87533

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.09  E-value=5.2e-10  Score=74.83  Aligned_cols=66  Identities=14%  Similarity=0.099  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|..      +.  ....+ ...+.++.+|++|++++.+.+.
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~------~~--~~~~~-~~~~~~~~~D~~~~~~v~~~~~   72 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG------ED--VVADL-GDRARFAAADVTDEAAVASALD   72 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC------HH--HHHHT-CTTEEEEECCTTCHHHHHHHHH
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch------HH--HHHhc-CCceEEEECCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999853      11  11222 3468999999999999988753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.09  E-value=2.4e-10  Score=73.60  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+++||||+|+||++++++|+ +|++|++++|+.
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~   36 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHS   36 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc
Confidence            3589999999999999999999 999999999974

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.09  E-value=8.5e-11  Score=81.45  Aligned_cols=63  Identities=19%  Similarity=0.306  Sum_probs=45.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..|+|+|||||||||++++++|+++| ++|++++|....    ...   ..+.  ++. +.+|++|++.+.+.+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~----~~~---~~~~--~~~-~~~d~~~~~~~~~~~  108 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG----TKF---VNLV--DLN-IADYMDKEDFLIQIM  108 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG----GGG---GGTT--TSC-CSEEEEHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc----chh---hccc--Cce-EeeecCcHHHHHHHH
Confidence            34789999999999999999999999 999999987531    111   1111  233 678888877777654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.09  E-value=3.8e-10  Score=77.29  Aligned_cols=78  Identities=13%  Similarity=-0.012  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..++++||||+|  +||++++++|+++|++|++++|+....   +....+.. ....+.++.+|++|++.+++.+....
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK---KRVDPLAE-SLGVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH---HHHHHHHH-HHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH---HHHHHHHH-hcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            4457899999997  999999999999999999999974211   11111111 11246899999999999998765443


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus       104 ~~~g  107 (296)
T 3k31_A          104 EEWG  107 (296)
T ss_dssp             HHHS
T ss_pred             HHcC
Confidence            3333

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.09  E-value=3.7e-10  Score=74.54  Aligned_cols=68  Identities=18%  Similarity=0.101  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-------cEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~   76 (91)
                      .++++||||+|+||++++++|+++|+       +|++++|+.      ++.. ....+.  ...+.++.+|++|++.+.+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   75 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA------ADLEKISLECRAEGALTDTITADISDMADVRR   75 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH------HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH------HHHHHHHHHHHccCCeeeEEEecCCCHHHHHH
Confidence            36799999999999999999999999       899999863      2221 112222  2357899999999999888


Q ss_pred             HHhh
Q 037506           77 QRMR   80 (91)
Q Consensus        77 ~~~~   80 (91)
                      .+..
T Consensus        76 ~~~~   79 (244)
T 2bd0_A           76 LTTH   79 (244)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.09  E-value=1.3e-10  Score=79.19  Aligned_cols=76  Identities=13%  Similarity=0.089  Sum_probs=56.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|+...     .......+.  ...+.++.+|++|++.+++.+....
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA-----LAELTDEIAGGGGEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHH-----HHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999987421     111222222  2357889999999999988764443


Q ss_pred             hhh
Q 037506           83 RSL   85 (91)
Q Consensus        83 ~~~   85 (91)
                      ..+
T Consensus        81 ~~~   83 (280)
T 3tox_A           81 RRF   83 (280)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            333

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.08  E-value=4.4e-10  Score=76.26  Aligned_cols=77  Identities=6%  Similarity=-0.099  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..++++||||+  |+||+++++.|+++|++|++++|+.. .  .+....+... ...+.++.+|++|++.+++.+....
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~--~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-L--EKRVREIAKG-FGSDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-G--HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-H--HHHHHHHHHh-cCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            345789999999  99999999999999999999999742 1  0111111111 1247889999999999988764443


Q ss_pred             hhh
Q 037506           83 RSL   85 (91)
Q Consensus        83 ~~~   85 (91)
                      ..+
T Consensus        95 ~~~   97 (285)
T 2p91_A           95 ENW   97 (285)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            333

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.08  E-value=5.6e-10  Score=75.19  Aligned_cols=80  Identities=9%  Similarity=0.032  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +..|.++||||+|  .||..+++.|.++|++|.+.+|+....  .+..+.+..+....+.++++|++|++++.+.+....
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR--KELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4568899999876  799999999999999999999974211  111122223333468899999999999988765544


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        82 ~~~G   85 (256)
T 4fs3_A           82 KDVG   85 (256)
T ss_dssp             HHHC
T ss_pred             HHhC
Confidence            4444

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.08  E-value=5.1e-11  Score=86.61  Aligned_cols=68  Identities=18%  Similarity=0.299  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-----------hhhcCCCeEEEEeeCCChhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-----------KEFQGIGVTIIENLCDVGQVT   74 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-----------~~l~~~~v~~v~gDl~d~~~l   74 (91)
                      .+|+|+|||||||||++++++|++.|++|++++|.....  .......           ......+++++.+|+.|++.+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE--IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHH--HHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChH--HHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            357899999999999999999999999999999975311  0000000           111235899999999996655


Q ss_pred             h
Q 037506           75 S   75 (91)
Q Consensus        75 ~   75 (91)
                      .
T Consensus       227 ~  227 (508)
T 4f6l_B          227 V  227 (508)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.07  E-value=2.5e-10  Score=77.61  Aligned_cols=72  Identities=7%  Similarity=0.052  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCC----hhhhhH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDV----GQVTSS   76 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d----~~~l~~   76 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+..     ++.. ....+.   ...+.++.+|++|    ++.+.+
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSA-----EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCH-----HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCch-----HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHH
Confidence            45678999999999999999999999999999999741     1211 112221   2368899999999    888887


Q ss_pred             HHhhh
Q 037506           77 QRMRS   81 (91)
Q Consensus        77 ~~~~~   81 (91)
                      .+...
T Consensus        96 ~~~~~  100 (288)
T 2x9g_A           96 IINSC  100 (288)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65433

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.07  E-value=4.6e-10  Score=75.96  Aligned_cols=73  Identities=10%  Similarity=0.044  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..+.++||||+|+||++++++|+++|++|++.++...     +..+. ...+.  ...+.++.+|++|++.+++.+...-
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA-----AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999998866431     22211 11121  2357889999999999988764433


Q ss_pred             h
Q 037506           83 R   83 (91)
Q Consensus        83 ~   83 (91)
                      .
T Consensus       101 ~  101 (267)
T 3u5t_A          101 E  101 (267)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.07  E-value=7.7e-11  Score=79.60  Aligned_cols=33  Identities=21%  Similarity=0.236  Sum_probs=31.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|||||||||++++++|+ +||+|++++|+.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~   33 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS   33 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc
Confidence            589999999999999999999 899999999974

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.06  E-value=1.8e-09  Score=75.86  Aligned_cols=83  Identities=14%  Similarity=0.119  Sum_probs=58.4

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-cc-hHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-PS-KLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~-~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+..+.++||||+|+||++++++|+++|++|++++|+...... .. .......+.  ...+.++.+|++|++++++.+.
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            3456789999999999999999999999999999998643200 00 011112222  2357889999999999998765


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      .....+|
T Consensus       122 ~~~~~~g  128 (346)
T 3kvo_A          122 KAIKKFG  128 (346)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHcC
Confidence            4433333

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.06  E-value=1.6e-09  Score=73.69  Aligned_cols=82  Identities=12%  Similarity=0.105  Sum_probs=62.2

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+=....|.++||||++.||+.+++.|.++|.+|.+.+|+....   +..+.+.. ....+.++.+|++|++.+++.+..
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~---~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~   76 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG---AFLDALAQ-RQPRATYLPVELQDDAQCRDAVAQ   76 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH---HHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH---HHHHHHHh-cCCCEEEEEeecCCHHHHHHHHHH
Confidence            66567788999999999999999999999999999999975321   11111121 234688999999999999988755


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-..+|
T Consensus        77 ~~~~~G   82 (258)
T 4gkb_A           77 TIATFG   82 (258)
T ss_dssp             HHHHHS
T ss_pred             HHHHhC
Confidence            555555

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.06  E-value=5.1e-10  Score=77.39  Aligned_cols=82  Identities=15%  Similarity=0.071  Sum_probs=56.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCC----CCcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQN----SRPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~----~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +..+.++||||+|+||++++++|+++|++|++++|+....    ...+.. .....+.  ...+.++.+|++|++.+.+.
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4457899999999999999999999999999999862100    001111 1122222  23578899999999999887


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +......+|
T Consensus       105 ~~~~~~~~g  113 (322)
T 3qlj_A          105 IQTAVETFG  113 (322)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHcC
Confidence            654433333

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.05  E-value=5.8e-10  Score=76.13  Aligned_cols=62  Identities=13%  Similarity=0.160  Sum_probs=47.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQ   72 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~   72 (91)
                      +..++++||||+|+||++++++|+++|++|++++ |+.      ++.. ....+.   ...+.++.+|++|++
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   73 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA------AEANALSATLNARRPNSAITVQADLSNVA   73 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH------HHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCH------HHHHHHHHHHhhhcCCeeEEEEeecCCcc
Confidence            4557899999999999999999999999999999 763      2221 112221   346889999999998

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.05  E-value=4.7e-10  Score=74.97  Aligned_cols=75  Identities=7%  Similarity=-0.138  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ...++|+||||+  |+||++++++|+++|++|++++|+...   .+....+.. ....+.++.+|++|++.+.+.+....
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF---KDRITEFAA-EFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG---HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh---HHHHHHHHH-HcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            456899999999  999999999999999999999997321   111111111 12257899999999999998764443


Q ss_pred             h
Q 037506           83 R   83 (91)
Q Consensus        83 ~   83 (91)
                      .
T Consensus        88 ~   88 (271)
T 3ek2_A           88 T   88 (271)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.05  E-value=1.8e-10  Score=78.47  Aligned_cols=37  Identities=19%  Similarity=0.257  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |.+|+|+|||||||||++++++|+++|++|++++|..
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~   37 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD   37 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc
Confidence            3457899999999999999999999999999988864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.05  E-value=1.1e-09  Score=74.35  Aligned_cols=67  Identities=10%  Similarity=0.127  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +..++++||||+|+||++++++|+++|++|++++|..      ........+.  ...+.++.+|++|++.+++.
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   97 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD------GVKEVADEIADGGGSAEAVVADLADLEGAANV   97 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST------HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            3457899999999999999999999999999999753      1122222222  23578899999999988876

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.04  E-value=1.9e-09  Score=72.98  Aligned_cols=73  Identities=8%  Similarity=-0.008  Sum_probs=57.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhhhc
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLGH   87 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~~~   87 (91)
                      |+|+||||++.||+++++.|.++|++|.+.+|+.      ++...+.. ...++..+++|++|++++++.+...-..+|.
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~------~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE------KRSADFAK-ERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHT-TCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHH-hcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999963      22222221 1246888999999999999987655555553

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.03  E-value=1.4e-09  Score=72.61  Aligned_cols=60  Identities=22%  Similarity=0.123  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .++++||||+|+||++++++|+++|++|++++|+....               ....+.+|++|++.+++.+...
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~d~~d~~~v~~~~~~~   81 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN---------------ADHSFTIKDSGEEEIKSVIEKI   81 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SSEEEECSCSSHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------cccceEEEeCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999975321               1235678899998888875443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.03  E-value=9.6e-10  Score=64.91  Aligned_cols=63  Identities=13%  Similarity=0.144  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+++|+|+|+ |++|+++++.|.+.| ++|++++|+.      ++.+.   +...++.++.+|+.+.+.+.+.+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~------~~~~~---~~~~~~~~~~~d~~~~~~~~~~~   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDL------AALAV---LNRMGVATKQVDAKDEAGLAKAL   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCH------HHHHH---HHTTTCEEEECCTTCHHHHHHHT
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCH------HHHHH---HHhCCCcEEEecCCCHHHHHHHH
Confidence            3468999999 999999999999999 9999999963      33322   22457889999999988888764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.03  E-value=8.2e-10  Score=76.79  Aligned_cols=62  Identities=13%  Similarity=0.160  Sum_probs=47.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQ   72 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~   72 (91)
                      +..+.++||||+|+||++++++|+++|++|++++ |+.      ++.. ....+.   ...+.++.+|++|++
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~  110 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA------AEANALSATLNARRPNSAITVQADLSNVA  110 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH------HHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCH------HHHHHHHHHHHhhcCCeEEEEEeeCCCch
Confidence            3457899999999999999999999999999999 763      2221 112221   236889999999998

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.02  E-value=3.8e-10  Score=75.59  Aligned_cols=78  Identities=14%  Similarity=0.070  Sum_probs=57.4

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+  ++||.+++++|+++|++|++++|+...    ...+....+   ....+.++.+|++|++++++.+.
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ----GAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSS----HHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcch----hHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            355789999999  899999999999999999999987532    111222222   13468899999999999998764


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      ..-..+|
T Consensus        94 ~~~~~~g  100 (267)
T 3gdg_A           94 DVVADFG  100 (267)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHcC
Confidence            4433333

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.02  E-value=1.4e-10  Score=76.58  Aligned_cols=34  Identities=18%  Similarity=0.192  Sum_probs=32.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+||||+||||++++++|+++|++|++++|+.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~   35 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ   35 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence            5899999999999999999999999999999975

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.02  E-value=2.4e-10  Score=77.07  Aligned_cols=36  Identities=22%  Similarity=0.185  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|||||||||++++++|+++|++|++++|..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   46 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD   46 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc
Confidence            357899999999999999999999999999999964

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.02  E-value=7.2e-10  Score=75.90  Aligned_cols=73  Identities=8%  Similarity=-0.102  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCch--HHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGY--LGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+  ||++++++|+++|++|++++|+..      ..+....+.  ...+.++.+|++|++++++.+..
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA------LKKRVEPLAEELGAFVAGHCDVADAASIDAVFET  102 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH------HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH------HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHH
Confidence            45678999999988  999999999999999999998631      111111111  12578999999999999987654


Q ss_pred             hhh
Q 037506           81 SGR   83 (91)
Q Consensus        81 ~~~   83 (91)
                      .-.
T Consensus       103 ~~~  105 (293)
T 3grk_A          103 LEK  105 (293)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.02  E-value=1.7e-09  Score=71.64  Aligned_cols=62  Identities=18%  Similarity=0.252  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++++||||+|+||++++++|+++|++|++++|+.      ++  ....+   ++.++.+|++| +.+.+.+..
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~------~~--~~~~~---~~~~~~~D~~~-~~~~~~~~~   63 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNP------EE--AAQSL---GAVPLPTDLEK-DDPKGLVKR   63 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC------HH--HHHHH---TCEEEECCTTT-SCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH------HH--HHHhh---CcEEEecCCch-HHHHHHHHH
Confidence            36899999999999999999999999999999974      22  11222   37889999999 877776543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.01  E-value=1.3e-09  Score=72.35  Aligned_cols=75  Identities=13%  Similarity=0.000  Sum_probs=54.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .++.++++||||+|+||++++++|+++|++|+++++...    .........+.  ...+.++.+|++|.+.+++.+...
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK----EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL   79 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCS----HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch----HHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence            345678999999999999999999999999998765431    11112222222  235788999999999888876443


Q ss_pred             h
Q 037506           82 G   82 (91)
Q Consensus        82 ~   82 (91)
                      .
T Consensus        80 ~   80 (255)
T 3icc_A           80 D   80 (255)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.00  E-value=1.6e-10  Score=77.68  Aligned_cols=34  Identities=18%  Similarity=0.384  Sum_probs=32.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|||||||||++++++|+++||+|++++|..
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL   39 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc
Confidence            4899999999999999999999999999999954

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.00  E-value=9.5e-10  Score=76.02  Aligned_cols=82  Identities=11%  Similarity=0.017  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC------CcchHHH-hhhhc--CCCeEEEEeeCCChhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS------RPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~   75 (91)
                      +..+.++||||+|+||+++++.|+++|++|++++|......      +++.... ...+.  ...+.++.+|++|++.++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            34578999999999999999999999999999988632110      0111111 11111  236889999999999998


Q ss_pred             HHHhhhhhhhh
Q 037506           76 SQRMRSGRSLG   86 (91)
Q Consensus        76 ~~~~~~~~~~~   86 (91)
                      +.+...-..+|
T Consensus       124 ~~~~~~~~~~g  134 (317)
T 3oec_A          124 AVVDEALAEFG  134 (317)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHcC
Confidence            87654433333

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=99.00  E-value=2.1e-09  Score=67.08  Aligned_cols=67  Identities=13%  Similarity=0.123  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |..++|+|+|+ |++|+++++.|.+.|++|++++|+.     +++.+.+......++.++.+|.+|++.+.++
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~-----~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a   67 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP-----EDDIKQLEQRLGDNADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC-----HHHHHHHHHHHCTTCEEEESCTTSHHHHHHH
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC-----hHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc
Confidence            45678999997 9999999999999999999999863     1222222222234789999999999888775

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.99  E-value=8.8e-10  Score=73.40  Aligned_cols=53  Identities=15%  Similarity=0.035  Sum_probs=43.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+|+|||||||||++++++|++ |++|++++|+...          .    .+   +.+|++|++.+.+++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~----------~----~~---~~~Dl~~~~~~~~~~   53 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI----------Q----GG---YKLDLTDFPRLEDFI   53 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC----------T----TC---EECCTTSHHHHHHHH
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC----------C----CC---ceeccCCHHHHHHHH
Confidence            4799999999999999999995 8999999997420          0    12   788999888887765

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.98  E-value=7e-10  Score=74.99  Aligned_cols=60  Identities=20%  Similarity=0.332  Sum_probs=44.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|+|||||||||++++++|+++| ++|++++|....    ...   ..+.  ++. +.+|++|.+.+.+.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~----~~~---~~~~--~~~-~~~d~~~~~~~~~~~   61 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG----TKF---VNLV--DLN-IADYMDKEDFLIQIM   61 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG----GGG---HHHH--TSC-CSEEEEHHHHHHHHH
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCC----chh---hhcC--cce-eccccccHHHHHHHH
Confidence            58999999999999999999999 999999987532    111   1111  223 678888877776653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.98  E-value=1.9e-09  Score=72.19  Aligned_cols=74  Identities=19%  Similarity=0.081  Sum_probs=53.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      .++++||||+|+||++++++|+++|  +.|.+..|+.      ++.+.+.......+.++.+|++|++.+++.+......
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE------APLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCH------HHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCH------HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            3689999999999999999999985  7888888863      2222222111346899999999999998876544333


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        76 ~g   77 (254)
T 3kzv_A           76 HG   77 (254)
T ss_dssp             HS
T ss_pred             cC
Confidence            33

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.97  E-value=1e-09  Score=75.06  Aligned_cols=74  Identities=18%  Similarity=0.159  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEecCCCCCCCcchHHH-hhhhc----CCCeEEEEeeCCChhhhhHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTQNSRPSKLEI-HKEFQ----GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~-~~~l~----~~~v~~v~gDl~d~~~l~~~   77 (91)
                      ..++++||||+|+||++++++|+++|+   +|++.+|+.      ++.+. ...+.    ...+.++.+|++|++.+++.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~  105 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL------EKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPF  105 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCH------HHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCH------HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence            457899999999999999999999987   999999874      22211 12221    23578899999999999987


Q ss_pred             Hhhhhhhh
Q 037506           78 RMRSGRSL   85 (91)
Q Consensus        78 ~~~~~~~~   85 (91)
                      +......+
T Consensus       106 ~~~~~~~~  113 (287)
T 3rku_A          106 IENLPQEF  113 (287)
T ss_dssp             HHTSCGGG
T ss_pred             HHHHHHhc
Confidence            65433333

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.97  E-value=2.2e-09  Score=71.27  Aligned_cols=60  Identities=15%  Similarity=0.137  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHh-CCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++++++||||+|+||++++++|++ .|+.|.+.+|+....             ...+.++.+|++|++++++.+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~   63 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVL   63 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHH
Confidence            456899999999999999999999 789999998875311             125688999999999998875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.95  E-value=4.2e-09  Score=71.26  Aligned_cols=66  Identities=11%  Similarity=-0.019  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.|.++||||++.||+.+++.|.++|++|.+.+|+....         .......+..+.+|++|++.+++.+..
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---------~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---------HAPRHPRIRREELDITDSQRLQRLFEA   75 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---------TSCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---------hhhhcCCeEEEEecCCCHHHHHHHHHh
Confidence            568999999999999999999999999999999975332         112234688999999999999887643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.95  E-value=2.8e-10  Score=76.60  Aligned_cols=28  Identities=25%  Similarity=0.408  Sum_probs=26.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH   32 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~   32 (91)
                      |++|+|+|||||||||++++++|+++|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~   31 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG   31 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence            5678999999999999999999999997

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.94  E-value=1.8e-09  Score=75.03  Aligned_cols=71  Identities=10%  Similarity=0.057  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-----CCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-----GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-----~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .++++||||+|+||++++++|+++|++|+++.|+....  ......+....     ..++.++.+|++|++++.+.+.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   77 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL--KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARE   77 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG--GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcH--HHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHH
Confidence            36799999999999999999999999999888764321  11111111111     2368999999999999988753

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.94  E-value=1.5e-09  Score=69.85  Aligned_cols=61  Identities=18%  Similarity=0.131  Sum_probs=47.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+++||||+|+||++++++|+++  +|++++|+.      ++.... ..+.  . +++.+|++|++.+.+.+.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~------~~~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~   62 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRA------GALAELAREVG--A-RALPADLADELEAKALLE   62 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCH------HHHHHHHHHHT--C-EECCCCTTSHHHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCH------HHHHHHHHhcc--C-cEEEeeCCCHHHHHHHHH
Confidence            57999999999999999999998  899999963      222221 1222  2 889999999999988754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.93  E-value=3.2e-09  Score=65.15  Aligned_cols=62  Identities=13%  Similarity=0.190  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      .+++|+|+|+ |++|+++++.|.+.|++|+++++++      ++.+.   +...++.++.+|.+|++.+.++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~------~~~~~---~~~~~~~~~~gd~~~~~~l~~~   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK------EKIEL---LEDEGFDAVIADPTDESFYRSL   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH------HHHHH---HHHTTCEEEECCTTCHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH------HHHHH---HHHCCCcEEECCCCCHHHHHhC
Confidence            3568999998 9999999999999999999999863      33322   2234788999999999887764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.91  E-value=3.4e-09  Score=71.64  Aligned_cols=62  Identities=16%  Similarity=0.071  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..++++||||+|+||++++++|+++|++|++++|+....            .  ....+.+|++|.+.+.+.+..
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------~--~~~~~~~Dv~~~~~~~~~~~~   87 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------A--ADLHLPGDLREAAYADGLPGA   87 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------C--CSEECCCCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------H--hhhccCcCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999975321            1  123457899998888776543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.89  E-value=7.4e-09  Score=76.20  Aligned_cols=72  Identities=18%  Similarity=0.263  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..++++||||+|+||.+++++|.++|+ +|+++.|+....  +...+....+..  ..+.++.+|++|.+.+.+.+.
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~--~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  332 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEA--PGAAELAEELRGHGCEVVHAACDVAERDALAALVT  332 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGS--TTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCccc--HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHh
Confidence            356899999999999999999999999 588888864211  111222233332  247889999999999988753

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.89  E-value=2.2e-09  Score=73.02  Aligned_cols=77  Identities=12%  Similarity=-0.019  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ...|.++||||++.||+.+++.|.++|++|.+.+|+...     ..+...++.  ...+..+++|++|++.+++.+...-
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~-----~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   81 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL-----LAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLD   81 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH-----HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            356889999999999999999999999999999986421     112222232  2357888999999999999875555


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ...|
T Consensus        82 ~~~G   85 (255)
T 4g81_D           82 AEGI   85 (255)
T ss_dssp             HTTC
T ss_pred             HHCC
Confidence            4444

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.88  E-value=5.4e-09  Score=71.05  Aligned_cols=75  Identities=12%  Similarity=0.082  Sum_probs=57.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..|.++||||++.||+.+++.|.++|.+|.+.+|+.      ++.+ ...++.  ...+.++++|++|++.+++.+...-
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~------~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLE------DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999964      2222 222232  2357889999999999999865554


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        80 ~~~G   83 (254)
T 4fn4_A           80 ETYS   83 (254)
T ss_dssp             HHHS
T ss_pred             HHcC
Confidence            4444

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.88  E-value=1e-09  Score=72.89  Aligned_cols=56  Identities=13%  Similarity=0.009  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++++||||+|+||++++++|+++|++|++++|+....            ..   . +.+|++|++++++.+
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~------------~~---~-~~~Dl~~~~~v~~~~   56 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------IA---D-LSTAEGRKQAIADVL   56 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------EC---C-TTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhh------------cc---c-cccCCCCHHHHHHHH
Confidence            35799999999999999999999999999999975211            00   1 556777777666654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.86  E-value=3.1e-09  Score=77.67  Aligned_cols=36  Identities=19%  Similarity=0.319  Sum_probs=34.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +|+|+|||||||||++|+++|+++||+|++++|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~  182 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP  182 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            689999999999999999999999999999999864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.86  E-value=8e-09  Score=75.48  Aligned_cols=72  Identities=17%  Similarity=0.162  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..++++||||+|+||.+++++|.++|++ |+++.|+....  +...+....+.  ...+.++.+|++|++.+.+.+.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~--~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~  299 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA--DGAGELVAELEALGARTTVAACDVTDRESVRELLG  299 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS--TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCc--HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHH
Confidence            3578999999999999999999999986 88889875211  11112222232  2357889999999999988753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.83  E-value=1.5e-08  Score=73.61  Aligned_cols=74  Identities=8%  Similarity=0.067  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      ..+.++||||+|.||.++++.|.++|++|++++|+..    .+...  ......+++++.+|++|.+.+++.+.......
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~----~~~l~--~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA----AEDLK--RVADKVGGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG----HHHHH--HHHHHHTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc----HHHHH--HHHHHcCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999988631    11111  11222357899999999999998764433333

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.81  E-value=4.3e-09  Score=69.82  Aligned_cols=60  Identities=25%  Similarity=0.207  Sum_probs=44.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQV   73 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~   73 (91)
                      ++.++++||||+|+||++++++|.+ |+.|++++|+.      ++......  ..++.++.+|+.|.+.
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~------~~~~~~~~--~~~~~~~~~D~~~~~~   62 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP------EHLAALAE--IEGVEPIESDIVKEVL   62 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCH------HHHHHHHT--STTEEEEECCHHHHHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCH------HHHHHHHh--hcCCcceecccchHHH
Confidence            3467899999999999999999987 99999999863      23322222  2368899999988754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=98.81  E-value=2.3e-08  Score=67.94  Aligned_cols=69  Identities=17%  Similarity=0.133  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      ...|.++||||++.||+++++.|.++|++|.+.+|+....           ..  ...++++|++|++.+++.+...-..
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LP--EELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SC--TTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CC--cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999964211           11  2346889999999998876544444


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        76 ~G   77 (261)
T 4h15_A           76 LG   77 (261)
T ss_dssp             TS
T ss_pred             cC
Confidence            44

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.81  E-value=2e-08  Score=67.01  Aligned_cols=37  Identities=14%  Similarity=0.204  Sum_probs=34.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ....++++||||+|+||++++++|+++|++|++++|+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   52 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN   52 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            3556889999999999999999999999999999996

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.76  E-value=3.1e-08  Score=72.83  Aligned_cols=70  Identities=21%  Similarity=0.306  Sum_probs=51.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ++++||||+|+||.+++++|.++|+ .|+++.|+....  +...+....+.  ...+.++.+|++|++.+.+.+.
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~--~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  312 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADA--PGAAELRAELEQLGVRVTIAACDAADREALAALLA  312 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGS--TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCCh--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            6899999999999999999999998 677777863211  11122222333  2357889999999999998753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.74  E-value=9.2e-09  Score=67.42  Aligned_cols=37  Identities=24%  Similarity=0.292  Sum_probs=33.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +..++++||||+|+||++++++|.++|++|++++|+.
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   40 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT   40 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc
Confidence            3457899999999999999999999999999999864

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.73  E-value=5.3e-09  Score=69.86  Aligned_cols=34  Identities=9%  Similarity=0.050  Sum_probs=32.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++++||||+|+||++++++|+++|++|++++|+.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   35 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESF   35 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            5799999999999999999999999999999974

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.70  E-value=5.1e-08  Score=60.84  Aligned_cols=66  Identities=20%  Similarity=0.239  Sum_probs=47.3

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~   76 (91)
                      |......++|+|+|+ |.+|+.+++.|.+.|++|++++|+.      ++.+   .+. ..+..++.+|..+++.+.+
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~------~~~~---~~~~~~g~~~~~~d~~~~~~l~~   79 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNE------YAFH---RLNSEFSGFTVVGDAAEFETLKE   79 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCG------GGGG---GSCTTCCSEEEESCTTSHHHHHT
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH------HHHH---HHHhcCCCcEEEecCCCHHHHHH
Confidence            444556789999997 9999999999999999999999864      2222   222 3356778888877665554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.68  E-value=1.2e-08  Score=71.12  Aligned_cols=33  Identities=24%  Similarity=0.391  Sum_probs=31.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      |+|+|||||||||++++++|+++|+ +|++++|.
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~   34 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ   34 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence            5899999999999999999999999 99999994

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.68  E-value=6.4e-08  Score=58.66  Aligned_cols=61  Identities=15%  Similarity=0.160  Sum_probs=45.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~   76 (91)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|++++|+.      ++.+   .+...+..++.+|..+++.+.+
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~------~~~~---~~~~~~~~~~~~d~~~~~~l~~   65 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE------EKVN---AYASYATHAVIANATEENELLS   65 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH------HHHH---TTTTTCSEEEECCTTCHHHHHT
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH------HHHH---HHHHhCCEEEEeCCCCHHHHHh
Confidence            4568999998 9999999999999999999999863      2222   2222356778888888766654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.67  E-value=9.2e-08  Score=66.31  Aligned_cols=74  Identities=16%  Similarity=0.049  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCC---CCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQN---SRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~---~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..++++||||+|+||++++++|.++|++|++.+|.....   .++++.+ ....+...+.. +.+|+.|.+.+++.+.
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHH
Confidence            4567899999999999999999999999999987642100   0122222 11223222323 3589999988777643

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.66  E-value=8.2e-08  Score=65.10  Aligned_cols=69  Identities=16%  Similarity=0.123  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ...|.++||||++.||+.+++.|.++|.+|.+.+|+..    .+..+.+.. ....+..+.+|++|++.+++.+
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~----~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~   75 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP----DETLDIIAK-DGGNASALLIDFADPLAAKDSF   75 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHH-TTCCEEEEECCTTSTTTTTTSS
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH----HHHHHHHHH-hCCcEEEEEccCCCHHHHHHHH
Confidence            34678999999999999999999999999999998741    111222222 1235788999999999887764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.66  E-value=4.7e-08  Score=66.70  Aligned_cols=68  Identities=13%  Similarity=0.172  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcC-CCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQG-IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~-~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++++||||+|++|++++..|.+.|++|++++|+.      ++.+. ...+.. .++.++.+|++|++.+.+.+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~------~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~  186 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL------DKAQAAADSVNKRFKVNVTAAETADDASRAEAV  186 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH
Confidence            4567899999999999999999999999999999963      22221 122211 25678889999988887754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.65  E-value=1.3e-07  Score=58.20  Aligned_cols=61  Identities=13%  Similarity=0.175  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +++|+|+|+ |.+|..+++.|.+.|++|++++++.      ++.+.   +...++.++.+|.++++.+.++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~------~~~~~---~~~~g~~~i~gd~~~~~~l~~a   67 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSR------TRVDE---LRERGVRAVLGNAANEEIMQLA   67 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH------HHHHH---HHHTTCEEEESCTTSHHHHHHT
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCH------HHHHH---HHHcCCCEEECCCCCHHHHHhc
Confidence            468999998 9999999999999999999999963      33332   2334789999999999887764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.63  E-value=1.4e-07  Score=56.93  Aligned_cols=61  Identities=16%  Similarity=0.170  Sum_probs=45.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~   76 (91)
                      .|+|+|+|+ |++|+.+++.|.+.|++|++++|+.      ++.+.+..  ..++.++.+|..+++.+.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~------~~~~~~~~--~~~~~~~~~d~~~~~~l~~   64 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK------DICKKASA--EIDALVINGDCTKIKTLED   64 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHH--HCSSEEEESCTTSHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH------HHHHHHHH--hcCcEEEEcCCCCHHHHHH
Confidence            478999987 9999999999999999999999863      22222211  1256778888887766554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.62  E-value=9.9e-08  Score=62.47  Aligned_cols=61  Identities=16%  Similarity=0.198  Sum_probs=49.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++.      ++.+.+..  ..+..++.+|.+|++.+.++
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~------~~~~~l~~--~~~~~~i~gd~~~~~~l~~a   61 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDR------ELCEEFAK--KLKATIIHGDGSHKEILRDA   61 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCH------HHHHHHHH--HSSSEEEESCTTSHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH------HHHHHHHH--HcCCeEEEcCCCCHHHHHhc
Confidence            57999997 9999999999999999999999863      33332221  23678999999999888775

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.60  E-value=8.7e-08  Score=70.68  Aligned_cols=71  Identities=8%  Similarity=0.073  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCc-EEEE-ecCCCC----------CCCcchHHHhhhhc--CCCeEEEEeeCCChh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHN-TFVY-ARPVTQ----------NSRPSKLEIHKEFQ--GIGVTIIENLCDVGQ   72 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~-~R~~~~----------~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~   72 (91)
                      .+.++||||+|.||.+++++|.++|++ |+++ .|+...          .  +........+.  ...+.++.+|++|.+
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAED--SGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC-----------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccC--HHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            468999999999999999999999988 4445 676321          0  11112222232  235788999999999


Q ss_pred             hhhHHHh
Q 037506           73 VTSSQRM   79 (91)
Q Consensus        73 ~l~~~~~   79 (91)
                      .+.+.+.
T Consensus       329 ~v~~~~~  335 (525)
T 3qp9_A          329 AAARLLA  335 (525)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998763

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.50  E-value=1.8e-07  Score=62.00  Aligned_cols=34  Identities=18%  Similarity=0.146  Sum_probs=31.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEE-e--cCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVY-A--RPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~--R~~   41 (91)
                      ++++||||+|+||++++++|+++|++|+++ +  |+.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~   38 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA   38 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCH
Confidence            679999999999999999999999999999 5  863

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.49  E-value=1e-06  Score=63.56  Aligned_cols=81  Identities=15%  Similarity=0.089  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHh-CCCcEEEEecCCCCCCCcc--------hHHHhhhh--cCCCeEEEEeeCCChhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTQNSRPS--------KLEIHKEF--QGIGVTIIENLCDVGQV   73 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~--------~~~~~~~l--~~~~v~~v~gDl~d~~~   73 (91)
                      ...+.++||||++.||.++++.|.+ .|.+|.+++|+.... ...        .......+  ....+..+.+|++|++.
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~-~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGE-EGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCB-TTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhh-hhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            4567899999999999999999999 999999998865332 000        00001111  12346789999999999


Q ss_pred             hhHHHhhhhhhhh
Q 037506           74 TSSQRMRSGRSLG   86 (91)
Q Consensus        74 l~~~~~~~~~~~~   86 (91)
                      +.+.+......+|
T Consensus       124 v~~~v~~i~~~~G  136 (405)
T 3zu3_A          124 KQLTIDAIKQDLG  136 (405)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHcC
Confidence            9987655545455

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.49  E-value=4.9e-07  Score=63.55  Aligned_cols=61  Identities=16%  Similarity=0.070  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+|||+|+|| |++|+.+++.|. +.++|++.+|+.      ++.+...    ..+..+..|+.|.+.+.+.+
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~------~~~~~~~----~~~~~~~~d~~d~~~l~~~~   75 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNN------ENLEKVK----EFATPLKVDASNFDKLVEVM   75 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCH------HHHHHHT----TTSEEEECCTTCHHHHHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCH------HHHHHHh----ccCCcEEEecCCHHHHHHHH
Confidence            5679999998 999999998875 468999999863      2332222    25677889999999988874

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.49  E-value=1.1e-06  Score=63.44  Aligned_cols=81  Identities=12%  Similarity=0.018  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCchHHHH--HHHHHHhCCCcEEEEecCCCCCCCc---------chHHHhhhhcCCCeEEEEeeCCChhhh
Q 037506            6 TKPKKLIFGGTGYLGKY--MVKASVSSGHNTFVYARPVTQNSRP---------SKLEIHKEFQGIGVTIIENLCDVGQVT   74 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~~~---------~~~~~~~~l~~~~v~~v~gDl~d~~~l   74 (91)
                      ..+.++||||++.||.+  ++..|.++|++|++++|+.......         +.......-....+.++.+|++|++.+
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence            45789999999999999  9999999999999999875432000         111111111123578899999999999


Q ss_pred             hHHHhhhhhhhh
Q 037506           75 SSQRMRSGRSLG   86 (91)
Q Consensus        75 ~~~~~~~~~~~~   86 (91)
                      ++.+...-..+|
T Consensus       139 ~~~v~~i~~~~G  150 (418)
T 4eue_A          139 DKVIKYIKDEFG  150 (418)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcC
Confidence            887654444444

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.49  E-value=3.3e-07  Score=74.61  Aligned_cols=75  Identities=13%  Similarity=0.058  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCCch-HHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchHHHh-hhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGY-LGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKLEIH-KEFQ--GIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~-iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~~~-~~l~--~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +..+.++||||++. ||.++++.|+++|++|++++ |+....  .+....+ ..+.  ...+.++.+|++|.+++++.+.
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~l--ee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV--TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTT--TTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHH--HHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            44578999999998 99999999999999999984 543221  1111111 1111  2247889999999999998764


Q ss_pred             hh
Q 037506           80 RS   81 (91)
Q Consensus        80 ~~   81 (91)
                      ..
T Consensus       552 ~I  553 (1688)
T 2pff_A          552 FI  553 (1688)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.47  E-value=1.3e-06  Score=63.29  Aligned_cols=77  Identities=14%  Similarity=0.003  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHh-CCCcEEEEecCCCCCCCcch------------HHHhhhhcCCCeEEEEeeCCChh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTQNSRPSK------------LEIHKEFQGIGVTIIENLCDVGQ   72 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~------------~~~~~~l~~~~v~~v~gDl~d~~   72 (91)
                      ..+.++||||++.||.++++.|.+ .|++|.+++|+....  ...            ...+.. ....+..+.+|++|++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~--~~~~~~ag~~n~~a~~~~~~~-~G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGT--ASKAGTAGWYNSAAFDKHAKA-AGLYSKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCC--SSSCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhh--hhhhcccccchhHHHHHHHHh-cCCcEEEEEecCCCHH
Confidence            367899999999999999999999 999999999875432  110            011111 1234678999999999


Q ss_pred             hhhHHHhhhhhhh
Q 037506           73 VTSSQRMRSGRSL   85 (91)
Q Consensus        73 ~l~~~~~~~~~~~   85 (91)
                      .+++.+...-..+
T Consensus       137 ~v~~~v~~i~~~~  149 (422)
T 3s8m_A          137 ARAQVIELIKTEM  149 (422)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHc
Confidence            9988765544444

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.47  E-value=1.4e-07  Score=65.54  Aligned_cols=34  Identities=12%  Similarity=0.149  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-------cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-------NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-------~V~~~~R~   40 (91)
                      +|||+||||+||||++++..|+++|+       +|+++++.
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~   44 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP   44 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence            46899999999999999999999886       89999875

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.45  E-value=6.9e-07  Score=64.84  Aligned_cols=66  Identities=14%  Similarity=0.096  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |.+++|+|+| +|++|+++++.|.+.|++|++.+|+.      ++.+.+... ..++..+.+|+.|.+.+.+.+
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~------~~a~~la~~-~~~~~~~~~Dv~d~~~l~~~l   66 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTL------ESAKKLSAG-VQHSTPISLDVNDDAALDAEV   66 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSH------HHHHHTTTT-CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCH------HHHHHHHHh-cCCceEEEeecCCHHHHHHHH
Confidence            3457899998 79999999999999999999999863      333222111 114778899999988777654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.45  E-value=3.7e-07  Score=68.31  Aligned_cols=76  Identities=11%  Similarity=-0.018  Sum_probs=46.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchH-HHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS---RPSKL-EIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~-~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+.++||||++.||++++++|.++|++|++++|......   +.+.. .....+...+.. +.+|+.|.+.+.+.+..
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~   95 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIET   95 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHH
Confidence            55678999999999999999999999999999988321100   01111 122223322323 34899998888776543


Q ss_pred             h
Q 037506           81 S   81 (91)
Q Consensus        81 ~   81 (91)
                      .
T Consensus        96 ~   96 (613)
T 3oml_A           96 A   96 (613)
T ss_dssp             -
T ss_pred             H
Confidence            3

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.39  E-value=1.2e-06  Score=72.34  Aligned_cols=71  Identities=13%  Similarity=0.104  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcCCch-HHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHh----hhhc--CCCeEEEEeeCCChhhhhH
Q 037506            5 NTKPKKLIFGGTGY-LGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIH----KEFQ--GIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         5 ~~~~~ilItGatG~-iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~----~~l~--~~~v~~v~gDl~d~~~l~~   76 (91)
                      +..+.++||||+|. ||.++++.|++.|++|+++++..     ++.. ...    ..+.  ...+.++.+|++|.+.+.+
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~-----~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~a  724 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRF-----SRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEA  724 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSC-----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC-----hHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHH
Confidence            44578999999999 99999999999999999986432     1111 111    2222  2347889999999999998


Q ss_pred             HHhh
Q 037506           77 QRMR   80 (91)
Q Consensus        77 ~~~~   80 (91)
                      .+..
T Consensus       725 lv~~  728 (1878)
T 2uv9_A          725 LVNY  728 (1878)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7644

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.39  E-value=4.2e-07  Score=66.12  Aligned_cols=68  Identities=12%  Similarity=0.226  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..|+|+|+|+ |.+|+++++.|.+.||+|+++++++      ++.+.+..  ..++.++.||-++++.++++-...+
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~------~~~~~~~~--~~~~~~i~Gd~~~~~~L~~Agi~~a   69 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDG------DRLRELQD--KYDLRVVNGHASHPDVLHEAGAQDA   69 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCH------HHHHHHHH--HSSCEEEESCTTCHHHHHHHTTTTC
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH------HHHHHHHH--hcCcEEEEEcCCCHHHHHhcCCCcC
Confidence            4589999999 9999999999999999999999863      33332221  2368899999999999998755433

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.38  E-value=5.9e-07  Score=57.15  Aligned_cols=61  Identities=13%  Similarity=0.095  Sum_probs=46.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~   76 (91)
                      ..++|+|+|+ |.+|..+++.|.+. |++|++++|+.      ++...   +...++.++.+|.++++.+.+
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~------~~~~~---~~~~g~~~~~gd~~~~~~l~~   99 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIRE------EAAQQ---HRSEGRNVISGDATDPDFWER   99 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCH------HHHHH---HHHTTCCEEECCTTCHHHHHT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCH------HHHHH---HHHCCCCEEEcCCCCHHHHHh
Confidence            3568999986 99999999999999 99999999863      33322   223367778888888766554

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.37  E-value=1.4e-06  Score=72.06  Aligned_cols=72  Identities=13%  Similarity=0.080  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCCch-HHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchH-HHhh----hhc--CCCeEEEEeeCCChhhhh
Q 037506            5 NTKPKKLIFGGTGY-LGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKL-EIHK----EFQ--GIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         5 ~~~~~ilItGatG~-iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~-~~~~----~l~--~~~v~~v~gDl~d~~~l~   75 (91)
                      +..+.++||||++. ||.++++.|++.|++|++++ |+.      ++. ....    .+.  ...+.++.+|++|.+.+.
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~------~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~  746 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFS------KQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE  746 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCC------HHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCH------HHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHH
Confidence            45578999999999 99999999999999999985 542      121 1111    121  234788999999999999


Q ss_pred             HHHhhhh
Q 037506           76 SQRMRSG   82 (91)
Q Consensus        76 ~~~~~~~   82 (91)
                      +.+....
T Consensus       747 alv~~i~  753 (1887)
T 2uv8_A          747 ALIEFIY  753 (1887)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8764433

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.34  E-value=1.5e-06  Score=62.09  Aligned_cols=66  Identities=15%  Similarity=0.085  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCCCCCCCcchHHHh-hhhcC---CCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTQNSRPSKLEIH-KEFQG---IGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~-~~l~~---~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |++|+|+|| |++|+.+++.|.+.+   .+|.+.+|+.      ++.+.+ ..+..   .++..+.+|++|.+++.+.+.
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~------~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~   73 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTL------SKCQEIAQSIKAKGYGEIDITTVDADSIEELVALIN   73 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCH------HHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCH------HHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHH
Confidence            368999999 999999999999988   3899999964      333222 22221   258899999999998888753

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.34  E-value=1.9e-06  Score=66.26  Aligned_cols=72  Identities=17%  Similarity=0.178  Sum_probs=52.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHH-hCCCc-EEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASV-SSGHN-TFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll-~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+.++||||+|.||..+++.|. ++|.+ |++++|+....  +...+...++..  ..+.++.+|++|++++++.+..
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~--~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAA--SGAAELVAQLTAYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGS--TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccch--HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            5679999999999999999999 79984 88888874221  111222333332  3478899999999999997633

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.30  E-value=1.1e-06  Score=59.57  Aligned_cols=37  Identities=16%  Similarity=0.115  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecC
Q 037506            4 KNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         4 ~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .+..++++||||+  |+||++++++|+++|++|++++|+
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            3556789999999  999999999999999999999863

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.26  E-value=8.3e-07  Score=58.52  Aligned_cols=59  Identities=7%  Similarity=-0.050  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |++++|++      ++.+.   +. .++.++.+|.+|++.+.++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~------~~~~~---~~-~~~~~i~gd~~~~~~l~~a   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDEN------VRKKV---LR-SGANFVHGDPTRVSDLEKA   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGG------GHHHH---HH-TTCEEEESCTTCHHHHHHT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCH------HHHHH---Hh-cCCeEEEcCCCCHHHHHhc
Confidence            468999998 9999999999999999 99998863      33322   22 4789999999999888765

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.22  E-value=1.6e-06  Score=62.36  Aligned_cols=61  Identities=18%  Similarity=0.223  Sum_probs=50.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      .++|+|+|. |.+|+.+++.|.+.|++|+++++++      ++.+.   +...++.++.||.++++.+.++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~------~~v~~---~~~~g~~vi~GDat~~~~L~~a   64 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDP------DHIET---LRKFGMKVFYGDATRMDLLESA   64 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCH------HHHHH---HHHTTCCCEESCTTCHHHHHHT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH------HHHHH---HHhCCCeEEEcCCCCHHHHHhc
Confidence            468999998 9999999999999999999999863      33332   3334788999999999988876

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.21  E-value=3.4e-06  Score=61.57  Aligned_cols=65  Identities=12%  Similarity=0.155  Sum_probs=48.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..+++|+|+|+ |++|+.+++.|.+. +++|++++|+.      ++.+.+...  .++.++..|+.|.+.+.+.+
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~------~ka~~la~~--~~~~~~~~D~~d~~~l~~~l   86 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTL------ANAQALAKP--SGSKAISLDVTDDSALDKVL   86 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSH------HHHHHHHGG--GTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCH------HHHHHHHHh--cCCcEEEEecCCHHHHHHHH
Confidence            45678999998 99999999999998 78999999963      333322221  25778889999988777654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.15  E-value=1.3e-06  Score=60.39  Aligned_cols=34  Identities=15%  Similarity=-0.007  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .+.++||||++  .||.+++++|.++|++|++.+|+
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~   37 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence            46899999875  89999999999999999977754

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.14  E-value=4.2e-06  Score=57.40  Aligned_cols=36  Identities=17%  Similarity=0.154  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +..+.++||||  +++||++++++|+++|++|++++|+
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            45578999999  8999999999999999999999864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.14  E-value=4e-06  Score=57.50  Aligned_cols=36  Identities=17%  Similarity=0.121  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +..+.++||||  +++||++++++|+++|++|++++|+
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            45678999999  8999999999999999999999874

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.09  E-value=7.7e-06  Score=54.82  Aligned_cols=39  Identities=23%  Similarity=0.353  Sum_probs=34.8

Q ss_pred             CCCCCCeEEEEcC----------------CchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            3 GKNTKPKKLIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         3 ~~~~~~~ilItGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+..++++||||                ||.+|.+++++|.++|++|+++.|+.
T Consensus         4 ~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~   58 (226)
T 1u7z_A            4 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV   58 (226)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             cCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence            3466789999999                79999999999999999999998864

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.08  E-value=6.5e-06  Score=55.37  Aligned_cols=36  Identities=28%  Similarity=0.384  Sum_probs=33.0

Q ss_pred             CCCeEEEEcC----------------CchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+||||                ||.+|.++++++.++|++|+++.|+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~   53 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR   53 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            3578999999                99999999999999999999999975

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.07  E-value=5.9e-06  Score=53.44  Aligned_cols=34  Identities=32%  Similarity=0.451  Sum_probs=31.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+||+|++|+++++.|.+.|++|++++|+.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~   34 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            5799999899999999999999999999999863

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.05  E-value=2e-05  Score=58.98  Aligned_cols=81  Identities=16%  Similarity=0.080  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS---RPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +..+.++||||++.||+.+++.|.++|++|++.+|......   +.+..+ ...++...+.+. .+|+.|.+.+++.+..
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVET   84 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHH
Confidence            45678999999999999999999999999999887541100   011221 122332223333 3688887666555433


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-..+|
T Consensus        85 ~~~~~G   90 (604)
T 2et6_A           85 AVKNFG   90 (604)
T ss_dssp             HHHHHS
T ss_pred             HHHHcC
Confidence            333344

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.04  E-value=2.7e-05  Score=66.87  Aligned_cols=76  Identities=5%  Similarity=0.024  Sum_probs=54.6

Q ss_pred             CCCCCeEEEEcCCch-HHHHHHHHHHhCCCcEEEEecCCCCCCCcc-hHHHhhhhcCC--CeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGGTGY-LGKYMVKASVSSGHNTFVYARPVTQNSRPS-KLEIHKEFQGI--GVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGatG~-iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~l~~~--~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .+..+.++||||++. ||..+++.|++.|.+|++.+|+.... ..+ .......+...  .+..+.+|++|++.+++.+.
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~-~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDD-RLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHH-HHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhh-hhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            356788999999999 99999999999999999999874210 000 01112223222  36778999999999988754


Q ss_pred             h
Q 037506           80 R   80 (91)
Q Consensus        80 ~   80 (91)
                      .
T Consensus      2212 ~ 2212 (3089)
T 3zen_D         2212 W 2212 (3089)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.02  E-value=1.9e-05  Score=66.88  Aligned_cols=73  Identities=15%  Similarity=0.144  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..+.++||||+|.||..+++.|.++|++ |++++|+....  .........+.  ...+.++.+|++|.+.+++.+..
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~--~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRT--GYQARQVREWRRQGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCS--HHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcch--HHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHH
Confidence            3467999999999999999999999987 77777865321  11112222232  23467889999999999987643

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.97  E-value=7e-06  Score=57.21  Aligned_cols=35  Identities=11%  Similarity=0.088  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-------cEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-------NTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-------~V~~~~R~   40 (91)
                      .++||+||||+||+|++++..|+..++       +|.+++++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~   45 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP   45 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence            457999999999999999999998885       78888875

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.90  E-value=7.8e-06  Score=56.58  Aligned_cols=58  Identities=7%  Similarity=-0.104  Sum_probs=48.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~   77 (91)
                      ++++|+|+ |.+|+.+++.|.+.|+ |+++++++      ++.+    +...++.++.||.+|++.++++
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~------~~~~----~~~~~~~~i~gd~~~~~~L~~a  173 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDEN------VRKK----VLRSGANFVHGDPTRVSDLEKA  173 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGG------GHHH----HHHTTCEEEESCTTSHHHHHHT
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCCh------hhhh----HHhCCcEEEEeCCCCHHHHHhc
Confidence            57999998 9999999999999999 99998763      3333    2235789999999999988876

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.89  E-value=0.00014  Score=52.29  Aligned_cols=83  Identities=8%  Similarity=0.023  Sum_probs=56.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHH-hCCCcEEEEecCCCCCC-Ccc-----hH-HHhhhh--cCCCeEEEEeeCCChhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASV-SSGHNTFVYARPVTQNS-RPS-----KL-EIHKEF--QGIGVTIIENLCDVGQV   73 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~~-~~~-----~~-~~~~~l--~~~~v~~v~gDl~d~~~   73 (91)
                      ....|++|||||+..+|.+.+..|. ..|..+.++.|...... .+.     .. ...+..  .......+.+|+.|++.
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            3457899999999999999988887 67889998887654320 000     00 000111  12356889999999999


Q ss_pred             hhHHHhhhhhhhh
Q 037506           74 TSSQRMRSGRSLG   86 (91)
Q Consensus        74 l~~~~~~~~~~~~   86 (91)
                      +++.+-.--..+|
T Consensus       127 i~~vi~~i~~~~G  139 (401)
T 4ggo_A          127 KAQVIEEAKKKGI  139 (401)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhcC
Confidence            9987655444444

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.86  E-value=1.3e-05  Score=55.86  Aligned_cols=36  Identities=17%  Similarity=0.134  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      .+|||+||||+||+|.+++..|+.++  ++|++++++.
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~   44 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN   44 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence            34689999999999999999999988  8999998753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.83  E-value=4.7e-05  Score=56.97  Aligned_cols=36  Identities=25%  Similarity=0.119  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +..+.++||||++.||..+++.|.++|++|++.+|.
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~  355 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK  355 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc
Confidence            445789999999999999999999999999998863

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.64  E-value=7.3e-05  Score=51.70  Aligned_cols=32  Identities=19%  Similarity=0.237  Sum_probs=28.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R   39 (91)
                      |||+||||+||+|++++..|+..++  ++.++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di   34 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR   34 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence            5899999999999999999998874  5777776

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.64  E-value=0.00011  Score=54.12  Aligned_cols=65  Identities=17%  Similarity=0.198  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCC-CeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGI-GVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~-~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+++++|+|. |.+|+.+++.|.+.+++|++++.+.      ++.+   .+... ++.++.||.++++.++++-..
T Consensus       126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~------~~~~---~~~~~~~~~~i~Gd~~~~~~L~~a~i~  191 (565)
T 4gx0_A          126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNY------DQAL---HLEEQEGFKVVYGSPTDAHVLAGLRVA  191 (565)
T ss_dssp             CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCH------HHHH---HHHHSCSSEEEESCTTCHHHHHHTTGG
T ss_pred             cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCH------HHHH---HHHHhcCCeEEEeCCCCHHHHHhcCcc
Confidence            3568999999 8999999999999999999999863      3332   23334 789999999999999886444

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.63  E-value=8.1e-05  Score=50.36  Aligned_cols=35  Identities=17%  Similarity=0.221  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+||.+|+.++..|.+.|++|++++|+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~   45 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP   45 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence            36899999999999999999999999999998863

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.60  E-value=5.2e-05  Score=53.62  Aligned_cols=36  Identities=14%  Similarity=0.235  Sum_probs=29.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-----C-cEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-----H-NTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-----~-~V~~~~R~   40 (91)
                      |.+++|+|.||||++|+.+++.|++++     + +++++.+.
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~   48 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA   48 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence            445799999999999999999999887     3 67777643

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.59  E-value=0.00034  Score=48.38  Aligned_cols=35  Identities=20%  Similarity=0.122  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|+|+|++|.+|..+++.+...|.+|++++|+.
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~  204 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE  204 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH
Confidence            46899999999999999999999999999999864

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.59  E-value=0.0001  Score=50.38  Aligned_cols=40  Identities=20%  Similarity=0.138  Sum_probs=31.5

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+-..++|+|.|+|. |.+|..++..|.+.||+|++++|+.
T Consensus         1 M~~~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~   40 (303)
T 3g0o_A            1 MSLTGTDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNP   40 (303)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCCCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH
Confidence            433445679999987 9999999999999999999999864

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.57  E-value=0.00011  Score=49.69  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCH
Confidence            579999998 9999999999999999999999863

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.56  E-value=0.0001  Score=50.76  Aligned_cols=32  Identities=13%  Similarity=0.062  Sum_probs=28.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R   39 (91)
                      |||+||||+||+|++++..|+..++  ++.++++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di   34 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI   34 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence            5899999999999999999998875  5777776

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.55  E-value=7.6e-05  Score=52.49  Aligned_cols=33  Identities=24%  Similarity=0.268  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R   39 (91)
                      +++|.|.||||++|+.+++.|.++. .+|+++.+
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~   41 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAA   41 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            3689999999999999999998765 58888865

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.53  E-value=0.00051  Score=46.31  Aligned_cols=68  Identities=13%  Similarity=0.003  Sum_probs=44.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLG   86 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~~   86 (91)
                      +||.|+|++|.+|+.+++.+.+. ++++.+.......   .+  ..   +. .... +..|++.++.+.+.+ ..+..-|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d---l~--~~---~~-~~~D-vvIDfT~p~a~~~~~-~~a~~~g   69 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP---LS--LL---TD-GNTE-VVIDFTHPDVVMGNL-EFLIDNG   69 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC---TH--HH---HH-TTCC-EEEECSCTTTHHHHH-HHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC---HH--HH---hc-cCCc-EEEEccChHHHHHHH-HHHHHcC
Confidence            48999999999999999998865 8998876654311   11  11   11 1233 567888887776653 4333333

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.51  E-value=0.00015  Score=47.41  Aligned_cols=35  Identities=29%  Similarity=0.397  Sum_probs=30.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+++|.|+| +|.+|+.+++.|.+.|++|++++|+.
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~   61 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNP   61 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            346899999 69999999999999999999999863

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.51  E-value=0.00014  Score=51.43  Aligned_cols=36  Identities=14%  Similarity=0.269  Sum_probs=29.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~   40 (91)
                      |++++|.|.||+|++|+.+++.|.++. .+++++.+.
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~   50 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD   50 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            445689999999999999999999876 488877654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.49  E-value=0.00019  Score=49.01  Aligned_cols=35  Identities=29%  Similarity=0.332  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +++|.|+||+|.+|.+++..|.+.|++|++++|+.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            35899999889999999999999999999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.49  E-value=0.00011  Score=46.84  Aligned_cols=35  Identities=23%  Similarity=0.258  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..++|+|+||+|.+|..+++.+...|++|++++|+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~   72 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS   72 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence            34689999999999999999999999999999985

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.49  E-value=0.00054  Score=47.02  Aligned_cols=35  Identities=14%  Similarity=0.119  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..++++|+||+|.||..+++.+...|.+|++++|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~  179 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS  179 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            34689999999999999999999999999999985

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=97.49  E-value=0.00015  Score=50.22  Aligned_cols=35  Identities=26%  Similarity=0.330  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      |++|+|.|+|+ |.+|..++..|.+.|++|++++|.
T Consensus         1 M~~mkI~IiGa-G~~G~~~a~~L~~~g~~V~~~~r~   35 (335)
T 3ghy_A            1 MSLTRICIVGA-GAVGGYLGARLALAGEAINVLARG   35 (335)
T ss_dssp             -CCCCEEEESC-CHHHHHHHHHHHHTTCCEEEECCH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEECh
Confidence            34679999998 999999999999999999999984

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.48  E-value=0.00022  Score=48.93  Aligned_cols=39  Identities=15%  Similarity=0.302  Sum_probs=33.6

Q ss_pred             CCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            2 EGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         2 ~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +....+++|.|+|. |.+|..+++.|.+.||+|++++|+.
T Consensus         4 ~~~~~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~   42 (306)
T 3l6d_A            4 SDESFEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSP   42 (306)
T ss_dssp             CCCCCSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CcccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            34445678999986 9999999999999999999999864

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.48  E-value=0.00017  Score=49.74  Aligned_cols=36  Identities=11%  Similarity=0.124  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |.+|+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~   37 (359)
T 1bg6_A            2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA   37 (359)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            44579999998 9999999999999999999999863

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.46  E-value=0.00022  Score=52.42  Aligned_cols=59  Identities=14%  Similarity=0.059  Sum_probs=47.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++++|+|+ |.+|.++++.|.+.|++|+++++++...         ..+   . .++.||.+|++.++++-..
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~---------~~~---~-~~i~gD~t~~~~L~~agi~  407 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPV---------CND---H-VVVYGDATVGQTLRQAGID  407 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSS---------CCS---S-CEEESCSSSSTHHHHHTTT
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHH---------hhc---C-CEEEeCCCCHHHHHhcCcc
Confidence            78999999 9999999999999999999999875332         111   2 7788999988888776433

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.46  E-value=0.00016  Score=50.07  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=30.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |||.|+||+|++|..++..|+..+  ++|.+++++.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            589999999999999999999888  7899999864

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.45  E-value=0.0011  Score=46.48  Aligned_cols=62  Identities=21%  Similarity=0.253  Sum_probs=45.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+++|+|+|+ |.+|..+++.+.+.|++|++++.....   +.     ..+   .-.++.+|+.|.+.+.+..
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~---p~-----~~~---ad~~~~~~~~d~~~l~~~~   71 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDC---PC-----RYV---AHEFIQAKYDDEKALNQLG   71 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTC---TT-----GGG---SSEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC---hh-----hhh---CCEEEECCCCCHHHHHHHH
Confidence            45678999998 899999999999999999999875421   11     111   1256678888888777753

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.45  E-value=9.2e-05  Score=48.51  Aligned_cols=36  Identities=14%  Similarity=0.242  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEE-EecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFV-YARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~-~~R~~   41 (91)
                      |++|+|.|+|+ |.+|..++..|.+.|++|++ .+|+.
T Consensus        21 m~mmkI~IIG~-G~mG~~la~~l~~~g~~V~~v~~r~~   57 (220)
T 4huj_A           21 QSMTTYAIIGA-GAIGSALAERFTAAQIPAIIANSRGP   57 (220)
T ss_dssp             GGSCCEEEEEC-HHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred             hcCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCCH
Confidence            55689999995 99999999999999999999 77764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.44  E-value=0.00056  Score=49.68  Aligned_cols=65  Identities=14%  Similarity=0.173  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .++|+|.|| |.+|.++++.| +.+++|+++.++.      ++.+.+...- ++..++.||.+|++.+.++-..
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~------~r~~~la~~l-~~~~Vi~GD~td~~~L~ee~i~  299 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNL------QRAEKLSEEL-ENTIVFCGDAADQELLTEENID  299 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCH------HHHHHHHHHC-TTSEEEESCTTCHHHHHHTTGG
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCH------HHHHHHHHHC-CCceEEeccccchhhHhhcCch
Confidence            468999998 99999999986 5669999998863      4444333221 3678999999999988887444

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.43  E-value=0.00026  Score=47.07  Aligned_cols=37  Identities=24%  Similarity=0.281  Sum_probs=31.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +...++|.|+|+ |.+|.+++..|.+.||+|++++|+.
T Consensus        16 ~~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~   52 (245)
T 3dtt_A           16 YFQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDP   52 (245)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             ccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            356789999985 9999999999999999999999974

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.42  E-value=0.0002  Score=50.36  Aligned_cols=35  Identities=20%  Similarity=0.255  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      .+++|.|.||||++|+.+++.|.++.+ +++++.+.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~   38 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR   38 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence            357899999999999999999997764 77777664

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.42  E-value=9e-05  Score=52.02  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=26.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEe
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYA   38 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~   38 (91)
                      +++|+|.||||++|+.+++.|.+++|   +++++.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            46899999999999999999997654   455554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.42  E-value=0.00078  Score=47.39  Aligned_cols=64  Identities=16%  Similarity=0.229  Sum_probs=44.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ...++|+|+|+ |.+|+.+++.+...|++|++++|+.      ++.+......  +.. +..|..+.+.+.+.+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~------~~~~~~~~~~--g~~-~~~~~~~~~~l~~~~  227 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNH------KRLQYLDDVF--GGR-VITLTATEANIKKSV  227 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHT--TTS-EEEEECCHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH------HHHHHHHHhc--Cce-EEEecCCHHHHHHHH
Confidence            34579999999 9999999999999999999999863      3332222211  212 445666666666653

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=97.39  E-value=0.00012  Score=51.09  Aligned_cols=33  Identities=18%  Similarity=0.318  Sum_probs=30.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|.|+|+ |.+|.+++..|.+.||+|++++|+.
T Consensus        16 ~kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~~   48 (366)
T 1evy_A           16 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNE   48 (366)
T ss_dssp             EEEEEECC-SHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            38999998 9999999999999999999999863

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.39  E-value=0.00026  Score=49.80  Aligned_cols=40  Identities=25%  Similarity=0.428  Sum_probs=33.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+.+...++|.|+|. |.+|..++..|.+.|++|++++|+.
T Consensus         2 m~~~~~~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~   41 (341)
T 3ktd_A            2 MTTKDISRPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSR   41 (341)
T ss_dssp             ----CCSSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred             CCccCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            666677789999985 9999999999999999999999864

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.37  E-value=0.00033  Score=47.46  Aligned_cols=36  Identities=17%  Similarity=0.245  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |..++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         2 m~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~   37 (283)
T 4e12_A            2 TGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINT   37 (283)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            34679999987 9999999999999999999999864

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.37  E-value=0.0003  Score=48.22  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|.|+|. |.+|..++..|.+.||+|++++|+.
T Consensus        19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~   54 (310)
T 3doj_A           19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTL   54 (310)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            45679999987 9999999999999999999999975

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.35  E-value=0.00033  Score=49.36  Aligned_cols=36  Identities=25%  Similarity=0.329  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~   40 (91)
                      |+++||.|+|++|++|+.++..++..|  .+|.+++++
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~   43 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF   43 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence            567899999999999999999999888  589999875

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=97.33  E-value=0.00034  Score=46.71  Aligned_cols=34  Identities=26%  Similarity=0.361  Sum_probs=31.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|+..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence            58999998 99999999999999999999999753

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.29  E-value=0.00046  Score=44.90  Aligned_cols=36  Identities=22%  Similarity=0.284  Sum_probs=30.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus        17 ~~~~~I~iiG~-G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           17 FQGMEITIFGK-GNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            45679999995 9999999999999999999999864

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.24  E-value=0.00046  Score=47.15  Aligned_cols=36  Identities=17%  Similarity=0.210  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      ..+|+|.|+|+ |.+|..++..|...|+  +|++++|+.
T Consensus         5 ~~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~   42 (319)
T 1lld_A            5 VKPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAK   42 (319)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence            34579999998 9999999999999998  999999863

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=97.24  E-value=0.0004  Score=46.01  Aligned_cols=36  Identities=19%  Similarity=0.272  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~   41 (91)
                      |.+|+|.|+|+ |.+|+.++..|.+.|    ++|++++|+.
T Consensus         2 m~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~   41 (262)
T 2rcy_A            2 MENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSK   41 (262)
T ss_dssp             CSSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence            45678999999 999999999999999    7999999875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.21  E-value=0.0019  Score=44.85  Aligned_cols=34  Identities=18%  Similarity=0.204  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .++|+|+||+|.+|..+++.+...|++|++++|+
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~  204 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGT  204 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999986

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=97.20  E-value=0.00055  Score=47.08  Aligned_cols=33  Identities=24%  Similarity=0.376  Sum_probs=30.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+|+ |-+|..++..|.+.|++|++++|+.
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~~~~r~~   35 (320)
T 3i83_A            3 LNILVIGT-GAIGSFYGALLAKTGHCVSVVSRSD   35 (320)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCh
Confidence            68999988 9999999999999999999999963

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=97.20  E-value=0.00066  Score=46.21  Aligned_cols=34  Identities=18%  Similarity=0.447  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~   48 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE   48 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            468999999 9999999999999999999999864

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.18  E-value=0.00064  Score=47.49  Aligned_cols=38  Identities=13%  Similarity=0.271  Sum_probs=32.4

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      |+|.++||.|+|+ |.+|..++..|...++ +|++++++.
T Consensus         3 ~~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~   41 (324)
T 3gvi_A            3 GSMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAE   41 (324)
T ss_dssp             ---CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred             CCCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence            5678889999998 9999999999999998 999999875

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.16  E-value=0.0016  Score=46.24  Aligned_cols=63  Identities=16%  Similarity=0.198  Sum_probs=45.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |.+++|+|+|+ |.+|..+++.+.+.|++|++++ ....   |..     .+.. ....+.+|+.|.+.+.+..
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~---p~~-----~~ad-~~~~~~~~~~d~~~l~~~a   84 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNS---PAK-----QISA-HDGHVTGSFKEREAVRQLA   84 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTC---TTG-----GGCC-SSCCEESCTTCHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCC---cHH-----Hhcc-ccceeecCCCCHHHHHHHH
Confidence            45679999999 8999999999999999999999 5321   111     1111 1245678888888777753

>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}

Probab=97.16  E-value=0.00074  Score=46.55  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .|||+|+|| |-.|..++..|.++|++|+++.|.+.
T Consensus         1 sm~V~IVGa-GpaGl~~A~~L~~~G~~v~v~Er~~~   35 (412)
T 4hb9_A            1 SMHVGIIGA-GIGGTCLAHGLRKHGIKVTIYERNSA   35 (412)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            479999999 99999999999999999999998654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.16  E-value=0.00061  Score=46.93  Aligned_cols=35  Identities=23%  Similarity=0.288  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+|+|.|+|. |.+|..++..|.+.|++|++++|+.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~   64 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTP   64 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCH
Confidence            4579999987 9999999999999999999999864

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.15  E-value=0.00064  Score=47.86  Aligned_cols=35  Identities=17%  Similarity=0.245  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+|+|.|+|+ |.+|.+++..|.+.|++|++++|+.
T Consensus        28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~   62 (356)
T 3k96_A           28 FKHPIAILGA-GSWGTALALVLARKGQKVRLWSYES   62 (356)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred             cCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            3578999998 9999999999999999999999963

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.15  E-value=0.00063  Score=45.94  Aligned_cols=33  Identities=27%  Similarity=0.372  Sum_probs=30.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|. |.+|+.++..|.+.||+|++++|+.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSP   34 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            68999997 9999999999999999999999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.15  E-value=0.0019  Score=44.89  Aligned_cols=34  Identities=21%  Similarity=0.209  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..+|+|+||+|.+|..+++.+...|.+|++++|+
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~  196 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGS  196 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4689999999999999999999999999999986

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.14  E-value=0.00053  Score=46.74  Aligned_cols=35  Identities=20%  Similarity=0.142  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +++|.|+|. |.+|..++..|.+.||+|++++|+..
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~   49 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIE   49 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            468999986 99999999999999999999999764

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.13  E-value=0.00076  Score=45.79  Aligned_cols=36  Identities=19%  Similarity=0.374  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~R~~   41 (91)
                      |.+++|.|+|+ |.+|..++..|.+.|+   +|++++|+.
T Consensus         1 M~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~   39 (280)
T 3tri_A            1 MNTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSL   39 (280)
T ss_dssp             -CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence            34578999999 9999999999999998   999999874

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.11  E-value=0.0048  Score=43.28  Aligned_cols=35  Identities=29%  Similarity=0.325  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|+ |.+|..+++.+.+.|++|++++...
T Consensus        13 ~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~   47 (389)
T 3q2o_A           13 PGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTK   47 (389)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            4568999998 8999999999999999999998754

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.11  E-value=0.0003  Score=49.29  Aligned_cols=34  Identities=9%  Similarity=0.116  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC--c-----EEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH--N-----TFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~-----V~~~~R~   40 (91)
                      .+||+||||+|+||++++..|...+.  +     +.+++++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~   43 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT   43 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCC
Confidence            46899999999999999999988774  5     8888875

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=97.10  E-value=0.0003  Score=48.64  Aligned_cols=38  Identities=18%  Similarity=0.216  Sum_probs=32.1

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV   41 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~   41 (91)
                      +.|.+|+|.|+|+ |.+|+.++..|.+.|       ++|++++|+.
T Consensus         4 ~~m~~mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~   48 (354)
T 1x0v_A            4 GSMASKKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE   48 (354)
T ss_dssp             ---CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred             cccCCCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence            3455679999998 999999999999998       9999999875

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.10  E-value=0.00077  Score=47.56  Aligned_cols=36  Identities=28%  Similarity=0.342  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |.+|+|.|+|. |.+|..++..|.+.||+|++++|+.
T Consensus        20 m~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~   55 (358)
T 4e21_A           20 FQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNV   55 (358)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             hcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            34579999986 9999999999999999999999864

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.10  E-value=0.00042  Score=46.79  Aligned_cols=34  Identities=24%  Similarity=0.298  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +++|.|+|. |.+|..++..|.+.||+|++++|+.
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNP   34 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSG
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            368999986 9999999999999999999999975

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.09  E-value=0.001  Score=44.91  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++++|+|+ |.+|+.++..|.+.|.+|++++|+.
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~  152 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV  152 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH
Confidence            35678999999 7799999999999999999999863

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.09  E-value=0.00075  Score=48.93  Aligned_cols=35  Identities=20%  Similarity=0.116  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+|+|.|+|. |++|..++..|.+ |++|++++|+.
T Consensus        34 ~~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~   68 (432)
T 3pid_A           34 SEFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQ   68 (432)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCH
Confidence            45679999997 9999999998887 99999999864

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=97.08  E-value=0.00061  Score=46.69  Aligned_cols=33  Identities=27%  Similarity=0.317  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+|+ |-+|..++..|.+.|++|++++|+.
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~~~~r~~   35 (312)
T 3hn2_A            3 LRIAIVGA-GALGLYYGALLQRSGEDVHFLLRRD   35 (312)
T ss_dssp             -CEEEECC-STTHHHHHHHHHHTSCCEEEECSTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEEcCc
Confidence            68999988 9999999999999999999999963

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.07  E-value=0.0008  Score=48.76  Aligned_cols=33  Identities=18%  Similarity=0.174  Sum_probs=30.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |++|..++..|.+.||+|++++|+.
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~   35 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDR   35 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCH
Confidence            68999988 9999999999999999999999874

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.07  E-value=0.0006  Score=47.74  Aligned_cols=33  Identities=27%  Similarity=0.428  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R   39 (91)
                      +++|.|.||||++|+.+++.|.+++   .+++++..
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s   38 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLAS   38 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEEC
Confidence            5789999999999999999999873   56777663

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=97.07  E-value=0.00077  Score=46.48  Aligned_cols=36  Identities=17%  Similarity=0.199  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~   41 (91)
                      |.+|+|.|+|+ |.+|..++..|.+.|    ++|++++|+.
T Consensus        20 ~~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~   59 (322)
T 2izz_A           20 FQSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDM   59 (322)
T ss_dssp             --CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence            45678999998 999999999999999    8999999874

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.06  E-value=0.00049  Score=45.83  Aligned_cols=35  Identities=26%  Similarity=0.415  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~   41 (91)
                      .+|+|.|+|+ |.+|+.++..|.+.|++ |.+++|+.
T Consensus         9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~   44 (266)
T 3d1l_A            9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTE   44 (266)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence            3578999998 99999999999999998 88888863

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.05  E-value=0.00055  Score=48.14  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=29.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~   40 (91)
                      .|++|.|+||||++|+.+++.|.++ .+++..+...
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~   38 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVS   38 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEec
Confidence            3579999999999999999999884 4688777543

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.05  E-value=0.0026  Score=43.80  Aligned_cols=66  Identities=14%  Similarity=0.078  Sum_probs=46.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----------CCCeEEEEeeCCChhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----------GIGVTIIENLCDVGQVTS   75 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----------~~~v~~v~gDl~d~~~l~   75 (91)
                      .+++|-++|- |.+|..+++.|++.||+|++++|++      ++.+.+....          ....+++..-+.|.+.++
T Consensus         2 ~M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~------~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~   74 (300)
T 3obb_A            2 HMKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQ------SAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVE   74 (300)
T ss_dssp             -CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSH------HHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHH
T ss_pred             CcCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCH------HHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHH
Confidence            3568999998 9999999999999999999999974      2322221110          013456666677877777


Q ss_pred             HHH
Q 037506           76 SQR   78 (91)
Q Consensus        76 ~~~   78 (91)
                      +.+
T Consensus        75 ~V~   77 (300)
T 3obb_A           75 GLY   77 (300)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.03  E-value=0.0022  Score=45.89  Aligned_cols=62  Identities=18%  Similarity=0.147  Sum_probs=44.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..++|+|+|+ |.+|+.+++.+.+.|++|++++.++..   |.     ..+   .-+.+..|+.|.+.+.+..
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~---p~-----~~~---ad~~~~~~~~d~~~l~~~a   94 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPAS---PA-----GAV---ADRHLRAAYDDEAALAELA   94 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTC---HH-----HHH---SSEEECCCTTCHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcC---ch-----hhh---CCEEEECCcCCHHHHHHHH
Confidence            34568999998 899999999999999999999765321   11     111   1245667888877776653

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.01  E-value=0.00091  Score=45.13  Aligned_cols=34  Identities=21%  Similarity=0.226  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|..++..|.+.|++|++++|+.
T Consensus         4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~   37 (301)
T 3cky_A            4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLME   37 (301)
T ss_dssp             CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            468999996 9999999999999999999998863

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.01  E-value=0.001  Score=48.60  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .|+|.|+|+ |++|..++..|.+.||+|++++|+.
T Consensus         8 ~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~   41 (478)
T 2y0c_A            8 SMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQ   41 (478)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            579999988 9999999999999999999999863

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.00  E-value=0.00077  Score=49.23  Aligned_cols=37  Identities=16%  Similarity=0.238  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|++++|.|+|. |.+|+.++..|.+.|++|++++|+.
T Consensus        12 ~~~~~~IgvIGl-G~MG~~lA~~La~~G~~V~v~~r~~   48 (480)
T 2zyd_A           12 HMSKQQIGVVGM-AVMGRNLALNIESRGYTVSIFNRSR   48 (480)
T ss_dssp             ---CBSEEEECC-SHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred             ccCCCeEEEEcc-HHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            478899999998 9999999999999999999999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.00  E-value=0.00081  Score=46.20  Aligned_cols=34  Identities=21%  Similarity=0.180  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .++|+|+||+|.+|..+++.+...|++|++++|+
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~  179 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST  179 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999986

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=97.00  E-value=0.0011  Score=44.29  Aligned_cols=33  Identities=21%  Similarity=0.214  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~   33 (279)
T 2f1k_A            1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ   33 (279)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            57999995 9999999999999999999998863

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.99  E-value=0.00076  Score=46.35  Aligned_cols=34  Identities=15%  Similarity=0.117  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      .+|+|.|+|. |.+|..++..|.+.|+ +|++++|+
T Consensus        23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~   57 (312)
T 3qsg_A           23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAA   57 (312)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCC
Confidence            3578999987 9999999999999999 99999996

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.98  E-value=0.00089  Score=48.04  Aligned_cols=33  Identities=24%  Similarity=0.347  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |++|..++..|.+.|++|++++|+.
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSS   33 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCH
Confidence            58999985 9999999999999999999999863

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.98  E-value=0.00077  Score=46.07  Aligned_cols=39  Identities=21%  Similarity=0.321  Sum_probs=29.9

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEE-ecCC
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPV   41 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~-~R~~   41 (91)
                      |.|+++||.|+|++|++|+.+++.+.+. ++++.+. +|+.
T Consensus         3 ~~M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            3 GSMSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             ---CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             CCccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            4577889999999999999999999875 5677764 5653

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.98  E-value=0.0008  Score=46.04  Aligned_cols=34  Identities=12%  Similarity=0.088  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .++|+|+||+|.+|..+++.+...|++|++++|+
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~  174 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT  174 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4689999999999999999999999999999986

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=96.98  E-value=0.00069  Score=46.05  Aligned_cols=34  Identities=21%  Similarity=0.165  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|+|+|+ |-+|..++..|.+.|++|++++|+.
T Consensus         2 ~mkI~iiGa-Ga~G~~~a~~L~~~g~~V~~~~r~~   35 (294)
T 3g17_A            2 SLSVAIIGP-GAVGTTIAYELQQSLPHTTLIGRHA   35 (294)
T ss_dssp             -CCEEEECC-SHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEecc
Confidence            368999998 9999999999999999999999974

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.96  E-value=0.0031  Score=41.97  Aligned_cols=36  Identities=25%  Similarity=0.323  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++|+|+|| |-+|...++.|++.|.+|++++...
T Consensus        29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~   64 (223)
T 3dfz_A           29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTV   64 (223)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            45679999999 9999999999999999999998753

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.96  E-value=0.0013  Score=45.17  Aligned_cols=35  Identities=23%  Similarity=0.388  Sum_probs=27.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      +||.++|- |.+|..+++.|++.||+|++++|++..
T Consensus         6 ~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~   40 (297)
T 4gbj_A            6 EKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASK   40 (297)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEC------
T ss_pred             CcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            47999987 999999999999999999999997643

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.95  E-value=0.0013  Score=48.25  Aligned_cols=37  Identities=16%  Similarity=0.190  Sum_probs=33.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC-CC-cEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS-GH-NTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~-~V~~~~R~~~   42 (91)
                      +..|+|.|+|+ |++|..++..|.+. || +|++++|+..
T Consensus        16 ~~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           16 GPIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CSCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            35679999998 99999999999999 99 9999999865

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.94  E-value=0.0012  Score=43.81  Aligned_cols=34  Identities=18%  Similarity=0.235  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|+.++..|.+.|++|.+++|+.
T Consensus         3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~   36 (259)
T 2ahr_A            3 AMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSL   36 (259)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCH
Confidence            478999995 9999999999999999999998863

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.94  E-value=0.0013  Score=45.33  Aligned_cols=34  Identities=12%  Similarity=0.097  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .++|+|+||+|.+|..+++.+...|.+|++++|+
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~  189 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS  189 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999986

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=96.94  E-value=0.0013  Score=45.28  Aligned_cols=34  Identities=18%  Similarity=0.401  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~~V~~~~r~~   47 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGEEVILWARRK   47 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            578999998 9999999999999999999999863

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.93  E-value=0.0016  Score=44.93  Aligned_cols=34  Identities=26%  Similarity=0.411  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      .++|.|+|. |.+|..++..|.+.|+  +|++++|+.
T Consensus        33 ~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~   68 (314)
T 3ggo_A           33 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINP   68 (314)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence            478999995 9999999999999999  999999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.93  E-value=0.0013  Score=45.16  Aligned_cols=35  Identities=17%  Similarity=0.146  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..++|+|+||+|.+|...++.+...|.+|++++|+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~  183 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG  183 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35689999999999999999999999999999986

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.93  E-value=0.0012  Score=45.67  Aligned_cols=33  Identities=12%  Similarity=0.082  Sum_probs=31.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ++|+|+||+|.||..+++.+...|+ +|++++|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~  195 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT  195 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC
Confidence            7899999999999999999999999 99999986

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.92  E-value=0.0012  Score=45.46  Aligned_cols=34  Identities=9%  Similarity=-0.003  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      +|+|.|+|. |.+|..++..|.+.| ++|++++|+.
T Consensus        24 ~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           24 MTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            468999996 999999999999999 9999999974

>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}

Probab=96.91  E-value=0.0017  Score=40.74  Aligned_cols=32  Identities=22%  Similarity=0.399  Sum_probs=30.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .|+|+|| |-.|..++..|.++|++|+++.+.+
T Consensus         4 dV~IIGa-GpaGL~aA~~La~~G~~V~v~Ek~~   35 (336)
T 3kkj_A            4 PIAIIGT-GIAGLSAAQALTAAGHQVHLFDKSR   35 (336)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCC
Confidence            5999999 9999999999999999999999864

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.91  E-value=0.0015  Score=44.53  Aligned_cols=34  Identities=26%  Similarity=0.403  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~   63 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTA   63 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            478999997 9999999999999999999999864

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=96.91  E-value=0.001  Score=44.45  Aligned_cols=32  Identities=25%  Similarity=0.288  Sum_probs=29.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|+.++..|.+ |++|++++|+.
T Consensus         2 ~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~   33 (289)
T 2cvz_A            2 EKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTF   33 (289)
T ss_dssp             CCEEEECC-STTHHHHHHHHHT-TSCEEEECSST
T ss_pred             CeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCH
Confidence            57999987 9999999999999 99999999864

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.91  E-value=0.0018  Score=43.56  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=28.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEE-EecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFV-YARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~-~~R~   40 (91)
                      |.++||.|+|+ |.+|+.+++.+.+.++++.+ ++|+
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~   36 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENT   36 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecC
Confidence            34689999999 99999999999988777665 4554

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.91  E-value=0.00097  Score=45.52  Aligned_cols=31  Identities=19%  Similarity=0.352  Sum_probs=29.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r   31 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGT   31 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEc
Confidence            57999998 99999999999999999999998

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=96.89  E-value=0.0015  Score=44.77  Aligned_cols=33  Identities=27%  Similarity=0.210  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|+|+|+ |-+|..++..|. .|++|++++|+.
T Consensus         2 ~mkI~IiGa-Ga~G~~~a~~L~-~g~~V~~~~r~~   34 (307)
T 3ego_A            2 SLKIGIIGG-GSVGLLCAYYLS-LYHDVTVVTRRQ   34 (307)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHh-cCCceEEEECCH
Confidence            378999998 999999999999 999999999963

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=96.88  E-value=0.00075  Score=45.68  Aligned_cols=32  Identities=28%  Similarity=0.256  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC-----C-CcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS-----G-HNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~-----g-~~V~~~~R   39 (91)
                      +|+|.|+|+ |.+|+.++..|.+.     | ++|++++|
T Consensus         8 ~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~~V~~~~r   45 (317)
T 2qyt_A            8 PIKIAVFGL-GGVGGYYGAMLALRAAATDGLLEVSWIAR   45 (317)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence            368999997 99999999999998     9 99999988

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.87  E-value=0.0013  Score=44.22  Aligned_cols=33  Identities=21%  Similarity=0.207  Sum_probs=30.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~V~~~~~~~   33 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGYPLIIYDVFP   33 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTCCEEEECSST
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            47999986 9999999999999999999999864

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.86  E-value=0.0032  Score=43.80  Aligned_cols=69  Identities=10%  Similarity=0.012  Sum_probs=44.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHHh-hhhcC-CCeEEEEeeCCChhhhhHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEIH-KEFQG-IGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~l~~-~~v~~v~gDl~d~~~l~~~   77 (91)
                      ...++++|+|+ |.+|+.++..|.+.|. +|+++.|+...   +++.+.+ ..+.. .+..+...++.+.+.+.+.
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~---~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~  223 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDF---YANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE  223 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTT---HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCch---HHHHHHHHHHhhhhcCCceEEeccchHHHHHhh
Confidence            35679999998 8899999999999997 89999997321   2333222 12211 1344445566665555543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.85  E-value=0.00068  Score=41.32  Aligned_cols=34  Identities=21%  Similarity=0.196  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++++|+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~   54 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNI   54 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCH
Confidence            578999997 9999999999999999999999863

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.84  E-value=0.0019  Score=44.87  Aligned_cols=35  Identities=14%  Similarity=0.223  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      |..++|.|+|+ |.+|..++..|...|+ +|++++++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~   41 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIP   41 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEecc
Confidence            45679999997 9999999999999999 99999986

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.84  E-value=0.002  Score=43.18  Aligned_cols=33  Identities=27%  Similarity=0.437  Sum_probs=29.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      ++|.|+|+ |.+|..++..|.+.|+  +|++++|+.
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~   36 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINP   36 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence            68999995 9999999999999998  899988863

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=96.83  E-value=0.0013  Score=43.48  Aligned_cols=33  Identities=18%  Similarity=0.350  Sum_probs=30.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|+.++..|.+.| ++|++++|+.
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~r~~   34 (263)
T 1yqg_A            1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGA   34 (263)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCeEEEECCCH
Confidence            57999997 999999999999999 9999999863

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=96.83  E-value=0.0013  Score=44.21  Aligned_cols=35  Identities=17%  Similarity=0.173  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~   40 (91)
                      |.+|+|.|+|+ |.+|+.++..|.+.  +++|++++|+
T Consensus         4 M~~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~   40 (290)
T 3b1f_A            4 MEEKTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRS   40 (290)
T ss_dssp             GCCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred             cccceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence            55689999995 99999999999987  6789988886

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.82  E-value=0.0021  Score=42.47  Aligned_cols=34  Identities=12%  Similarity=0.159  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC----cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH----NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~----~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|..++..|.+.|+    +|++++|+.
T Consensus         2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~   39 (247)
T 3gt0_A            2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNT   39 (247)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred             CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence            368999996 9999999999999998    999999864

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.78  E-value=0.0016  Score=47.47  Aligned_cols=36  Identities=17%  Similarity=0.167  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~   41 (91)
                      +++|+|.|+|. |++|..++..|.+.  |++|++++|+.
T Consensus         7 ~~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~   44 (481)
T 2o3j_A            7 GKVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNT   44 (481)
T ss_dssp             CCCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence            34579999998 99999999999998  79999999863

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.78  E-value=0.0015  Score=47.34  Aligned_cols=34  Identities=18%  Similarity=0.111  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~   41 (91)
                      +|+|.|+|. |++|..++..|.+.  |++|++++|+.
T Consensus         5 ~mkI~VIG~-G~mG~~lA~~La~~g~G~~V~~~d~~~   40 (467)
T 2q3e_A            5 IKKICCIGA-GYVGGPTCSVIAHMCPEIRVTVVDVNE   40 (467)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence            468999986 99999999999998  89999999864

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=96.77  E-value=0.0015  Score=46.46  Aligned_cols=32  Identities=16%  Similarity=0.102  Sum_probs=29.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |++|..++..|.+ ||+|++++|+.
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~d~~~   32 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIVDILP   32 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CCEEEEEECCH
Confidence            58999988 9999999999999 99999999863

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.77  E-value=0.0018  Score=47.50  Aligned_cols=36  Identities=17%  Similarity=0.326  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |.+|+|.|+|. |.+|..++..|.+.||+|++++|+.
T Consensus         2 ~~~~kIgiIGl-G~MG~~lA~~L~~~G~~V~v~dr~~   37 (484)
T 4gwg_A            2 NAQADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTV   37 (484)
T ss_dssp             -CCBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSST
T ss_pred             CCCCEEEEECh-hHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            45678999997 9999999999999999999999975

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.76  E-value=0.0019  Score=43.54  Aligned_cols=33  Identities=30%  Similarity=0.291  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|+.
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~   38 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNP   38 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            68999995 9999999999999999999998863

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.76  E-value=0.0052  Score=42.74  Aligned_cols=34  Identities=21%  Similarity=0.247  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|+|+ |.+|..+++.+...|.+|++++++.
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~  214 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRRE  214 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            678999999 9999999999999999999999863

>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2

Probab=96.76  E-value=0.0027  Score=44.28  Aligned_cols=37  Identities=22%  Similarity=0.253  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +...+|+|+|| |..|..++..|.+.|++|+++.|...
T Consensus         3 ~~~~~V~IVGa-G~aGl~~A~~L~~~G~~v~v~E~~~~   39 (397)
T 2vou_A            3 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   39 (397)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            34568999999 99999999999999999999998654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.76  E-value=0.00059  Score=46.54  Aligned_cols=35  Identities=20%  Similarity=0.348  Sum_probs=28.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHh-CCCcEEEE-ecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVS-SGHNTFVY-ARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~-~R~   40 (91)
                      .++||.|+|++|++|+.+++.+.+ .++++++. +|+
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~   40 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   40 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            457999999999999999998875 56888754 444

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.76  E-value=0.0095  Score=41.45  Aligned_cols=34  Identities=32%  Similarity=0.377  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |++|+|+|+ |..|..+++.+.+.|+++++++...
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~   34 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTP   34 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESST
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            368999998 8999999999999999999998653

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.76  E-value=0.002  Score=43.56  Aligned_cols=35  Identities=20%  Similarity=0.254  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++++|+|+ |.+|+.++..|.+.|++|+++.|+.
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~  152 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF  152 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4578999998 7899999999999999999999974

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.76  E-value=0.0034  Score=43.36  Aligned_cols=35  Identities=14%  Similarity=0.298  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|+||+|.+|...++.+...|.+|++++++.
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~  194 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT  194 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            46899999999999999999999999999999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.74  E-value=0.002  Score=44.42  Aligned_cols=35  Identities=9%  Similarity=0.051  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..++|+|+|++|.+|..+++.+...|++|++++|+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~  200 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGS  200 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            34689999999999999999999999999999986

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.73  E-value=0.0015  Score=45.82  Aligned_cols=33  Identities=27%  Similarity=0.316  Sum_probs=27.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEe
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYA   38 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~   38 (91)
                      .+++|.|.||||++|+.+++.|.++. .+++++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            35789999999999999999988765 5777775

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=96.72  E-value=0.0025  Score=43.84  Aligned_cols=34  Identities=24%  Similarity=0.314  Sum_probs=29.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..+++|.|+|+ |.+|..++..|.+.|++|+++ ++
T Consensus        17 ~~~~kI~IiGa-Ga~G~~~a~~L~~~G~~V~l~-~~   50 (318)
T 3hwr_A           17 FQGMKVAIMGA-GAVGCYYGGMLARAGHEVILI-AR   50 (318)
T ss_dssp             ---CEEEEESC-SHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred             ccCCcEEEECc-CHHHHHHHHHHHHCCCeEEEE-Ec
Confidence            45689999988 999999999999999999999 64

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.71  E-value=0.0021  Score=45.67  Aligned_cols=27  Identities=26%  Similarity=0.260  Sum_probs=23.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCc
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHN   33 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~   33 (91)
                      +++|.|.||||++|..|++.|.+++|+
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p   28 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLP   28 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCC
Confidence            468999999999999999988887663

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=96.68  E-value=0.0026  Score=46.58  Aligned_cols=35  Identities=20%  Similarity=0.443  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         4 ~~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~   38 (483)
T 3mog_A            4 NVQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISA   38 (483)
T ss_dssp             CCCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCH
Confidence            4578999988 9999999999999999999999874

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=96.68  E-value=0.003  Score=45.79  Aligned_cols=36  Identities=11%  Similarity=0.123  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +..++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus        35 ~~~~kV~VIGa-G~MG~~iA~~la~~G~~V~l~D~~~   70 (463)
T 1zcj_A           35 QPVSSVGVLGL-GTMGRGIAISFARVGISVVAVESDP   70 (463)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            34578999998 9999999999999999999999864

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=96.68  E-value=0.0023  Score=46.50  Aligned_cols=36  Identities=19%  Similarity=0.259  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |++++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         3 m~~~~IgvIG~-G~mG~~lA~~L~~~G~~V~v~dr~~   38 (474)
T 2iz1_A            3 MAQANFGVVGM-AVMGKNLALNVESRGYTVAIYNRTT   38 (474)
T ss_dssp             CTTBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCCCcEEEEee-HHHHHHHHHHHHhCCCEEEEEcCCH
Confidence            44578999997 9999999999999999999999863

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.67  E-value=0.0028  Score=42.93  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|+|++|.+|...++.+...|.+|++++|+.
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~  160 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP  160 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            46899999999999999999999999999999864

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.66  E-value=0.0028  Score=43.61  Aligned_cols=34  Identities=12%  Similarity=0.237  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      +++|.|+|+ |.+|..++..|...|+ +|++++++.
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~   38 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAE   38 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCc
Confidence            468999998 9999999999999998 999999874

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.65  E-value=0.0015  Score=45.66  Aligned_cols=28  Identities=18%  Similarity=0.273  Sum_probs=24.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEE
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTF   35 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~   35 (91)
                      ++|.|.||+|++|+.+++.|.++++++.
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~   28 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLS   28 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcE
Confidence            4799999999999999999997776544

>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*

Probab=96.64  E-value=0.0032  Score=43.63  Aligned_cols=37  Identities=16%  Similarity=0.269  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |..+.|+|+|| |..|..++..|.+.|++|+++.|...
T Consensus         9 m~~~dVvIVGa-G~aGl~~A~~L~~~G~~v~viE~~~~   45 (379)
T 3alj_A            9 GKTRRAEVAGG-GFAGLTAAIALKQNGWDVRLHEKSSE   45 (379)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            44568999999 99999999999999999999998654

>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*

Probab=96.64  E-value=0.0036  Score=38.91  Aligned_cols=33  Identities=18%  Similarity=0.173  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+|+|+|| |++|..++..|.+.|.+|+++.+.+
T Consensus         2 ~~vvIIGg-G~~Gl~~A~~l~~~g~~v~lie~~~   34 (180)
T 2ywl_A            2 WDVIVVGG-GPSGLSAALFLARAGLKVLVLDGGR   34 (180)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            47899999 9999999999999999999999864

>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*

Probab=96.64  E-value=0.0035  Score=43.77  Aligned_cols=36  Identities=25%  Similarity=0.236  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ....|+|+|| |..|..++..|.++|++|+++.|...
T Consensus        22 ~~~dV~IVGa-G~aGl~~A~~La~~G~~V~v~E~~~~   57 (407)
T 3rp8_A           22 GHMKAIVIGA-GIGGLSAAVALKQSGIDCDVYEAVKE   57 (407)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            3468999999 99999999999999999999998754

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=96.63  E-value=0.0025  Score=42.24  Aligned_cols=31  Identities=13%  Similarity=0.074  Sum_probs=28.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |+|.|+|+ |.+|..++..|.+.|++|++.+|
T Consensus         1 M~I~iIG~-G~mG~~la~~l~~~g~~V~~~~~   31 (264)
T 1i36_A            1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLE   31 (264)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCT
T ss_pred             CeEEEEec-hHHHHHHHHHHHHCCCeEEEeCC
Confidence            47999986 99999999999999999999766

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.62  E-value=0.0031  Score=43.32  Aligned_cols=33  Identities=24%  Similarity=0.282  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      |||.|+|+ |.+|..++..|...|+  +|++++++.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~   35 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDE   35 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence            58999999 9999999999999998  999999863

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.62  E-value=0.0024  Score=43.77  Aligned_cols=33  Identities=18%  Similarity=0.226  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|..++..|.+.|  ++|++++|+.
T Consensus         2 ~kI~VIGa-G~~G~~la~~L~~~g~~~~V~l~d~~~   36 (309)
T 1hyh_A            2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANE   36 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence            68999995 999999999999998  8999999863

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.62  E-value=0.015  Score=40.52  Aligned_cols=59  Identities=14%  Similarity=0.059  Sum_probs=40.2

Q ss_pred             chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH------hhhh-----cCCCeEEEEeeCCChhhhhHHH
Q 037506           17 GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI------HKEF-----QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus        17 G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~------~~~l-----~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |..|.+++++++++|++|+.+.|+.+-.  |.. ..      +..+     .+.++..+..|+.....+.+++
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~sl~--p~~-r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av  134 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARSAF--PYA-HRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEAL  134 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTSCC--TTG-GGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHH
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCCcC--cch-hccCccchhhhhccccccccccceeeeccccHHHHHHHH
Confidence            9999999999999999999999975422  210 00      0100     1135667788888777777765

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.61  E-value=0.0029  Score=44.16  Aligned_cols=34  Identities=21%  Similarity=0.308  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~   40 (91)
                      ..++|.|+|+ |++|+.++..|...++  ++++++++
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~   39 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVN   39 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecc
Confidence            4679999997 9999999999999886  89999985

>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}

Probab=96.60  E-value=0.0031  Score=44.80  Aligned_cols=33  Identities=18%  Similarity=0.109  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|+|| |..|..++..|.+.|++|+++.+..
T Consensus        23 ~~ViIVGa-GpaGl~~A~~La~~G~~V~viE~~~   55 (430)
T 3ihm_A           23 KRIGIVGA-GTAGLHLGLFLRQHDVDVTVYTDRK   55 (430)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CCEEEECC-cHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            57999999 9999999999999999999999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.59  E-value=0.0032  Score=43.66  Aligned_cols=36  Identities=22%  Similarity=0.337  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...+|+|+||+|.+|...++.+...|.+|++++|+.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~  202 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST  202 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            346899999999999999999999999999999863

>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*

Probab=96.59  E-value=0.005  Score=42.26  Aligned_cols=33  Identities=18%  Similarity=0.356  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +..|+|+|| |.+|..++.+|.++|++|+++.+.
T Consensus         6 ~~dVvVIG~-Gi~Gls~A~~La~~G~~V~vle~~   38 (363)
T 1c0p_A            6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (363)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHhCCCEEEEEecc
Confidence            457999999 999999999999999999999975

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.58  E-value=0.003  Score=43.66  Aligned_cols=36  Identities=17%  Similarity=0.216  Sum_probs=30.3

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP   40 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~   40 (91)
                      ||.++||.|+|+ |.+|..++..|...+  .++.+++++
T Consensus         3 ~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~   40 (317)
T 3d0o_A            3 KFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLD   40 (317)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence            356679999999 999999999998877  488888875

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.58  E-value=0.0023  Score=42.97  Aligned_cols=33  Identities=24%  Similarity=0.198  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|+.++..|.+.|++|++++ +.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~   35 (295)
T 1yb4_A            3 AMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IG   35 (295)
T ss_dssp             -CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SS
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CH
Confidence            468999986 9999999999999999999887 43

>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*

Probab=96.57  E-value=0.0047  Score=43.08  Aligned_cols=35  Identities=31%  Similarity=0.440  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...+|+|+|| |..|..++..|.+.|++|+++.|..
T Consensus        25 ~~~dV~IVGa-G~aGl~~A~~L~~~G~~v~v~E~~~   59 (398)
T 2xdo_A           25 SDKNVAIIGG-GPVGLTMAKLLQQNGIDVSVYERDN   59 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3458999999 9999999999999999999999865

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.56  E-value=0.0034  Score=42.60  Aligned_cols=35  Identities=14%  Similarity=0.189  Sum_probs=30.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++++|+|++ .+|+.++..|.+.| +|++.+|+.
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~  160 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTV  160 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCH
Confidence            345789999995 89999999999999 999998863

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.56  E-value=0.0027  Score=44.27  Aligned_cols=34  Identities=15%  Similarity=0.188  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..+|+|+||+|.+|...++.+...|.+|++++|+
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~  197 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS  197 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC
Confidence            4689999999999999999999999999999986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.54  E-value=0.0037  Score=42.88  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ...+|+|+||+|.+|...++.+...|.+|++++++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~  182 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST  182 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34689999999999999999999999999999985

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=96.54  E-value=0.0043  Score=45.33  Aligned_cols=35  Identities=31%  Similarity=0.393  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|.|+|+ |.+|+.++..|.+.|++|++++++.
T Consensus        53 ~i~kVaVIGa-G~MG~~IA~~la~aG~~V~l~D~~~   87 (460)
T 3k6j_A           53 DVNSVAIIGG-GTMGKAMAICFGLAGIETFLVVRNE   87 (460)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECcH
Confidence            4578999999 9999999999999999999999874

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.54  E-value=0.009  Score=41.22  Aligned_cols=35  Identities=11%  Similarity=-0.033  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCchHHHH-HHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKY-MVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~-l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+++|.|+|. |.+|.. +++.|.++|++|++.++..
T Consensus         3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~~~D~~~   38 (326)
T 3eag_A            3 AMKHIHIIGI-GGTFMGGLAAIAKEAGFEVSGCDAKM   38 (326)
T ss_dssp             CCCEEEEESC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence            4678999999 668885 8999999999999999864

>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*

Probab=96.54  E-value=0.0031  Score=44.18  Aligned_cols=34  Identities=18%  Similarity=0.152  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHh---CCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVS---SGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~---~g~~V~~~~R~~   41 (91)
                      |++|+|+|| |+.|...+..|.+   .|++|+++.+..
T Consensus         1 m~~VvIIGg-G~aGl~aA~~L~~~~~~g~~V~vie~~~   37 (409)
T 3h8l_A            1 MTKVLVLGG-RFGALTAAYTLKRLVGSKADVKVINKSR   37 (409)
T ss_dssp             -CEEEEECS-SHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence            368999999 9999999999999   899999998764

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.54  E-value=0.0048  Score=42.95  Aligned_cols=36  Identities=11%  Similarity=0.259  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      |.++||.|+|+ |.+|..++..|...+. +|.+++++.
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~   39 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQ   39 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCh
Confidence            56689999996 9999999999999887 899999864

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.53  E-value=0.0027  Score=43.82  Aligned_cols=33  Identities=21%  Similarity=0.126  Sum_probs=30.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|..++..|...|+  +|++++|+.
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~   35 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDK   35 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence            58999999 9999999999999998  999999863

>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}

Probab=96.53  E-value=0.0024  Score=43.01  Aligned_cols=34  Identities=18%  Similarity=0.166  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+|+|+|| |..|...+..|.+.|++|+++.+..
T Consensus         3 ~~~vvIIG~-G~aGl~~A~~l~~~g~~v~vie~~~   36 (357)
T 4a9w_A            3 SVDVVVIGG-GQSGLSAGYFLRRSGLSYVILDAEA   36 (357)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred             cCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCC
Confidence            457999999 9999999999999999999999864

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.52  E-value=0.0082  Score=43.17  Aligned_cols=35  Identities=17%  Similarity=0.108  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|. |-.|.++++.|.++|++|++.++..
T Consensus         8 ~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            8 ENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             TTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            4679999999 8899999999999999999999864

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.52  E-value=0.0041  Score=42.77  Aligned_cols=33  Identities=12%  Similarity=0.107  Sum_probs=29.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~   41 (91)
                      |+|.|+|+ |.+|..++..|...  +++|++++++.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~   35 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVE   35 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence            58999999 99999999999885  79999999975

>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*

Probab=96.51  E-value=0.0028  Score=46.21  Aligned_cols=35  Identities=23%  Similarity=0.295  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+++|+|+|| ||-|..+++.|.+.+++|+++++++
T Consensus        41 ~KprVVIIGg-G~AGl~~A~~L~~~~~~VtLId~~~   75 (502)
T 4g6h_A           41 DKPNVLILGS-GWGAISFLKHIDTKKYNVSIISPRS   75 (502)
T ss_dssp             SSCEEEEECS-SHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred             CCCCEEEECC-cHHHHHHHHHhhhCCCcEEEECCCC
Confidence            4578999999 9999999999998999999999864

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.51  E-value=0.0046  Score=43.01  Aligned_cols=34  Identities=18%  Similarity=0.244  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ++||.|+|| |.+|..++..|...|+ +|++++++.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~   43 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVK   43 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCh
Confidence            468999999 9999999999999998 999999874

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=96.51  E-value=0.002  Score=45.08  Aligned_cols=34  Identities=18%  Similarity=0.211  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|+.++..|.+.|       ++|++++|+.
T Consensus        21 ~~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~   61 (375)
T 1yj8_A           21 PLKISILGS-GNWASAISKVVGTNAKNNYLFENEVRMWIRDE   61 (375)
T ss_dssp             CBCEEEECC-SHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence            468999998 999999999999999       9999999875

>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}

Probab=96.50  E-value=0.0024  Score=45.72  Aligned_cols=37  Identities=8%  Similarity=-0.009  Sum_probs=30.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~   42 (91)
                      |++++|+|+|| |+.|...+..|.+.  +++|+++.+...
T Consensus         1 M~~~~VvIIGa-G~aGl~aA~~L~~~~~g~~Vtvie~~~~   39 (472)
T 3iwa_A            1 MSLKHVVVIGA-VALGPKAACRFKRLDPEAHVTMIDQASR   39 (472)
T ss_dssp             ---CEEEEECC-SSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence            34679999999 99999999999988  899999998653

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.49  E-value=0.0053  Score=42.60  Aligned_cols=34  Identities=21%  Similarity=0.360  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ++||.|+|+ |.+|..++..|...|+ +|.+++++.
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~   38 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK   38 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence            568999998 9999999999999998 888888764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.49  E-value=0.005  Score=42.80  Aligned_cols=34  Identities=15%  Similarity=0.246  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      +++|.|+|| |.+|..++..|...|+ +|++++++.
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~   48 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIE   48 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCH
Confidence            368999998 9999999999999998 999999874

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=96.48  E-value=0.0012  Score=44.28  Aligned_cols=34  Identities=26%  Similarity=0.263  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..|+|.|+|. |.+|.+++..|.+.|++|++++|.
T Consensus         5 ~~mkI~IIG~-G~~G~sLA~~L~~~G~~V~~~~~~   38 (232)
T 3dfu_A            5 PRLRVGIFDD-GSSTVNMAEKLDSVGHYVTVLHAP   38 (232)
T ss_dssp             CCCEEEEECC-SCCCSCHHHHHHHTTCEEEECSSG
T ss_pred             CCcEEEEEee-CHHHHHHHHHHHHCCCEEEEecCH
Confidence            4579999998 999999999999999999998875

>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*

Probab=96.48  E-value=0.0052  Score=43.20  Aligned_cols=35  Identities=23%  Similarity=0.416  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|| |..|...+..|.+.|++|+++.+..
T Consensus         2 ~~~~v~iiG~-G~~Gl~~A~~l~~~g~~v~v~E~~~   36 (384)
T 2bi7_A            2 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   36 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CcCCEEEECc-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            3478999999 9999999999999999999999764

>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*

Probab=96.48  E-value=0.0015  Score=43.85  Aligned_cols=34  Identities=15%  Similarity=0.088  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+|+|+|| |+.|...+..|.+.|++|+++.+..
T Consensus         7 ~~~vvIIG~-G~aGl~aA~~l~~~g~~v~lie~~~   40 (332)
T 3lzw_A            7 VYDITIIGG-GPVGLFTAFYGGMRQASVKIIESLP   40 (332)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            457999999 9999999999999999999999864

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=96.47  E-value=0.0042  Score=42.76  Aligned_cols=33  Identities=21%  Similarity=0.337  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|.|+|+ |.+|+.++..|. .|++|++++|+.
T Consensus        12 ~~~V~vIG~-G~MG~~iA~~la-aG~~V~v~d~~~   44 (293)
T 1zej_A           12 HMKVFVIGA-GLMGRGIAIAIA-SKHEVVLQDVSE   44 (293)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred             CCeEEEEee-CHHHHHHHHHHH-cCCEEEEEECCH
Confidence            478999999 999999999999 999999999864

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.47  E-value=0.0027  Score=45.36  Aligned_cols=33  Identities=15%  Similarity=0.201  Sum_probs=26.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEE
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVY   37 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~   37 (91)
                      |.+++|.|.||||++|..+++.|.++. .++..+
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l   50 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHAL   50 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEE
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEe
Confidence            556789999999999999999887765 466544

>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}

Probab=96.45  E-value=0.0036  Score=44.69  Aligned_cols=34  Identities=12%  Similarity=0.206  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ||+|+|+|| |.-|...+..|.++|++|+++-+..
T Consensus         1 Mk~VvVIGa-G~~GL~aA~~La~~G~~V~VlEa~~   34 (501)
T 4dgk_A            1 MKPTTVIGA-GFGGLALAIRLQAAGIPVLLLEQRD   34 (501)
T ss_dssp             CCCEEEECC-HHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHCCCcEEEEccCC
Confidence            578999999 9999999999999999999998754

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.44  E-value=0.0052  Score=42.31  Aligned_cols=33  Identities=15%  Similarity=0.193  Sum_probs=29.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      +||.|+|+ |++|..++..|...|+ +|.+++++.
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~   36 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE   36 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence            68999999 9999999999999986 888888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	91
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-11
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-09
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	8e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	9e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	7e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	0.001
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.003
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.003

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 55.2 bits (131), Expect = 4e-11
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 6  TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
          ++ + L+ G TGY+G+++ KAS+  GH TF+  R  T +S   K ++ + F+  G  I+ 
Sbjct: 2  SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 50.9 bits (120), Expect = 1e-09
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEN 66
          K + LI GGTGY+GK +V AS+S GH T+V  RP    S   K+++   F+ +G  +IE 
Sbjct: 3  KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV-VSNIDKVQMLLYFKQLGAKLIE- 60

Query: 67 LCDVGQVTSSQRMRSGRSLGHHLIN 91
             +              +    + 
Sbjct: 61 -ASLDDHQRLVDALKQVDVVISALA 84

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 43.9 bits (102), Expect = 3e-07
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 5  NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
            K    + G TG  G  +++ + + GH+                L   +      VT+ 
Sbjct: 1  QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH------SLKGLIAEELQAIPNVTLF 54

Query: 65 E 65
          +
Sbjct: 55 Q 55

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 37.1 bits (84), Expect = 8e-05
 Identities = 10/59 (16%), Positives = 25/59 (42%)

Query: 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCD 69
          L+ G  G++  ++V+  +  G+     AR  ++ +   K    K        ++E++  
Sbjct: 15 LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK 73

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.1 bits (84), Expect = 9e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 8  PKK-LIFGGTGYLGKYMVKASVSSGHNTFVYAR 39
          PK+ L+ G TG  G++++   +S      V A 
Sbjct: 2  PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (81), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 7  KPKK-LIFGGTGYLGKYMVKASVSSGHNTFVYAR 39
            KK  IFG TG  G   +  +V +G+   V  R
Sbjct: 2  AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 34.4 bits (77), Expect = 7e-04
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 7  KPKK-LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
          + K+  + G TG+ G ++     + G     Y+   T  + PS  E  +   G+  + I 
Sbjct: 7  QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL--TAPTVPSLFETARVADGM-QSEIG 63

Query: 66 NLCDVGQVTSSQRMRSGRSLGHH 88
          ++ D  ++  S R      + H 
Sbjct: 64 DIRDQNKLLESIREFQPEIVFHM 86

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.4 bits (77), Expect = 7e-04
 Identities = 5/50 (10%), Positives = 13/50 (26%), Gaps = 3/50 (6%)

Query: 11 LIFGGTGYLGKYMVKASVSSGHNTFVYA---RPVTQNSRPSKLEIHKEFQ 57
          L+ G +G  G+ + K                    +     + ++     
Sbjct: 7  LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDI 56

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (76), Expect = 0.001
 Identities = 7/35 (20%), Positives = 14/35 (40%)

Query: 4  KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA 38
          +       I G +G  G+ ++K  +  G  + V  
Sbjct: 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTL 45

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 33.8 bits (76), Expect = 0.001
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 9  KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE-NL 67
          + L+ GG+GY+G +     + +GH+  +       NS+ S L + +   G   T +E ++
Sbjct: 2  RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLC--NSKRSVLPVIERLGGKHPTFVEGDI 59

Query: 68 CD 69
           +
Sbjct: 60 RN 61

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 32.7 bits (73), Expect = 0.003
 Identities = 10/59 (16%), Positives = 23/59 (38%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
          +   LI G TG  G Y+ +  +  G+      R  +  +      I+ +   +   +++
Sbjct: 1  RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK 59

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.003
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 7  KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE 55
          + + LI GG G++G ++    +  GH   V     T   R  +  I  E
Sbjct: 1  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE 49

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	91
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.66
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.62
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.61
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.6
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.56
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.55
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.54
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.54
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.54
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.53
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.52
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.5
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.49
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.48
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.47
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.45
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.44
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.43
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.4
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.39
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.38
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.35
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.33
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.25
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.24
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.24
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.21
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.19
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.19
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.16
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.14
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.13
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.12
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.12
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.12
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.11
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.1
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.09
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.08
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.08
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.07
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.07
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.07
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.07
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.06
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.06
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.06
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.05
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.05
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.04
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.04
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.04
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.04
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.04
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.03
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.01
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.01
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.99
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.99
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.99
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.98
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.98
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.97
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.97
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.97
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.97
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.97
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.95
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.93
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.92
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.92
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.9
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.88
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.87
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.85
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.82
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.81
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.78
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.77
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.75
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.74
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.74
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.71
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.68
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.67
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.66
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.6
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.58
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.57
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.57
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.54
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.48
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	98.47
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.41
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.39
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.32
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.3
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.3
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.16
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.99
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.94
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.89
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.87
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.87
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.8
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.78
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.74
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	97.72
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	97.71
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	97.69
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	97.62
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.61
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.6
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.6
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.55
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	97.52
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	97.52
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.52
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.52
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	97.49
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.48
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.48
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	97.47
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	97.47
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	97.47
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.46
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.45
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.44
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.41
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	97.41
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	97.38
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	97.38
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	97.35
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	97.34
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.34
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.34
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.32
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.32
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.31
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	97.31
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.29
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.28
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	97.27
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.26
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.26
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	97.25
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.24
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	97.21
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	97.2
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	97.18
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	97.18
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	97.18
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.17
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	97.16
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.1
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	97.08
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.02
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.01
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	97.0
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	96.99
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	96.97
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.97
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	96.97
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.95
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.94
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	96.92
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	96.91
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.89
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	96.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.87
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.86
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.85
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	96.84
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.83
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.82
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.82
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	96.79
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.77
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.77
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	96.75
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	96.73
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	96.72
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.69
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	96.63
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.62
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.62
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.59
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	96.59
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.55
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.53
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	96.48
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.48
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.45
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.44
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.42
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.38
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.35
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.31
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	96.29
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	96.28
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.27
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.25
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.24
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.2
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	96.17
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.14
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.12
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	96.11
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	96.1
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.05
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.04
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.02
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.01
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.98
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.94
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.91
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.9
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.85
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.82
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	95.77
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.72
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.65
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	95.64
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.59
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	95.54
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.47
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.42
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.37
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	95.35
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.31
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.31
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.29
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	95.17
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.1
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	94.94
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	94.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.81
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	94.71
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	94.69
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	94.65
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.63
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.6
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.57
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.5
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	94.43
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	94.39
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.29
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.22
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.19
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.14
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	94.11
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.08
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	94.07
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	94.03
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.03
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.02
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	94.01
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	93.87
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.84
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	93.72
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.67
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.6
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.6
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.58
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.57
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.53
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	93.5
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.46
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.45
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.4
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	93.21
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.92
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.89
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	92.84
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	92.78
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.75
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.51
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.49
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	92.46
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.41
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	92.35
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.34
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	92.32
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	92.19
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	92.14
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.11
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	91.98
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.97
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.89
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	91.88
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.83
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.76
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.58
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	91.54
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.52
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	91.39
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	91.21
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	91.16
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	91.02
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	91.01
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	90.98
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.92
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.85
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.81
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	90.72
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	90.29
d2gjca1	311	Thiazole biosynthetic enzyme Thi4 {Baker's yeast (	90.18
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.18
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.88
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.88
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	89.79
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	89.57
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	89.48
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	89.37
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.28
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	89.26
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	89.22
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	89.16
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	89.08
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.82
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	88.82
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	88.57
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.01
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	87.91
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	87.9
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.8
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.68
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	87.67
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.54
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	87.3
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	86.75
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.21
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	86.06
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	85.95
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	85.6
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.59
d1gpea1	391	Glucose oxidase {Penicillium amagasakiense [TaxId:	85.58
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	85.45
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.94
d1cf3a1	385	Glucose oxidase {Aspergillus niger [TaxId: 5061]}	84.77
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	84.68
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	84.65
d1sbza_	186	Probable aromatic acid decarboxylase Pad1 {Escheri	84.65
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	84.32
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	84.01
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	83.99
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.86
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	83.59
d1rkba_	173	Adenylate kinase {Human (Homo sapiens), isoenzyme	83.48
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	83.1
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	82.93
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	82.74
d1a88a_	275	Chloroperoxidase L {Streptomyces lividans [TaxId:	82.36
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	82.1
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	82.06
d1jnra2	356	Adenylylsulfate reductase A subunit {Archaeon Arch	81.67
d2i3ba1	189	Cancer-related NTPase, C1orf57 {Human (Homo sapien	80.74
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	80.64
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	80.39

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.1e-16  Score=103.07  Aligned_cols=65  Identities=17%  Similarity=0.099  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |.++||+||||||+||++++++|+++||+|++++|+++..         ......+++++.+|++|.+.+.+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~---------~~~~~~~~~~~~gD~~d~~~l~~al   65 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL---------PSEGPRPAHVVVGDVLQAADVDKTV   65 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS---------CSSSCCCSEEEESCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc---------ccccccccccccccccchhhHHHHh
Confidence            6789999999999999999999999999999999975322         2233457899999999999999876

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.62  E-value=8.7e-16  Score=101.04  Aligned_cols=73  Identities=29%  Similarity=0.499  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +++||||||||||||++++++|+++||+|++++|.+.....+.+...+..+...+++++.+|+.+...+.+.+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   74 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV   74 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh
Confidence            6889999999999999999999999999999999876542233333444555668999999999998888765

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.61  E-value=9.3e-16  Score=101.78  Aligned_cols=72  Identities=38%  Similarity=0.554  Sum_probs=59.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .++||||||||||||++++++|+++||+|++++|+.... +..+......+...+++++++|+.|.+.+.+.+
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~-~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~   73 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVS-NIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL   73 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSS-CHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCccc-chhHHHHHhhhccCCcEEEEeecccchhhhhhc
Confidence            356799999999999999999999999999999986544 233344444556678999999999999988875

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=2.1e-15  Score=102.87  Aligned_cols=70  Identities=19%  Similarity=0.305  Sum_probs=56.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |||||||||||||++|++.|+++||+|++++|..+..  .............+++++++|++|.+.+.+++.
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   70 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALMTEILH   70 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc--hhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHh
Confidence            6899999999999999999999999999999865443  222222233445689999999999999988764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.56  E-value=7.8e-15  Score=99.67  Aligned_cols=70  Identities=14%  Similarity=0.069  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..|||||||||||||++|+++|+++||+|++++|.....  +......  ....+++++++|++|++.+.+++.
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~--~~~~~~~--~~~~~i~~~~~Dl~d~~~l~~~~~   76 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV--PSLFETA--RVADGMQSEIGDIRDQNKLLESIR   76 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS--SCHHHHT--TTTTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc--HHHHhhh--hcccCCeEEEeeccChHhhhhhhh
Confidence            358999999999999999999999999999999976432  2211111  113479999999999999888753

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.55  E-value=6.3e-15  Score=100.59  Aligned_cols=71  Identities=11%  Similarity=0.134  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ++|+|||||||||||++|+++|++.||+|.++.++....  .........+...+++++++|++|.+.+..++
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~--~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~   71 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY--AGNKANLEAILGDRVELVVGDIADAELVDKLA   71 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT--TCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc--cccHHHHHHhhcCCeEEEEccCCCHHHHHHHH
Confidence            478999999999999999999999999877766542111  11112223344568999999999999988864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.54  E-value=1.4e-14  Score=97.22  Aligned_cols=66  Identities=17%  Similarity=0.191  Sum_probs=51.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHH
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ||||||||||||++|+++|+++||+|++++|.....    ....+..+ ...+++++++|++|.+.+.+++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~----~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~   68 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG----ATDNLHWLSSLGNFEFVHGDIRNKNDVTRLI   68 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTT----HHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccc----chhHHHHhhccCCcEEEEcccCCHHHHHHHH
Confidence            799999999999999999999999999998754322    11222222 2347899999999999998875

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.8e-14  Score=98.07  Aligned_cols=71  Identities=23%  Similarity=0.185  Sum_probs=55.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC----CcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS----RPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~----~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +||||||||||||++|+++|+++||+|++++|......    .++....+..+...+++++++|++|.+.+.+.+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~   77 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLF   77 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccc
Confidence            58999999999999999999999999999987433210    122233334455568999999999999998865

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=1.3e-14  Score=97.45  Aligned_cols=69  Identities=13%  Similarity=0.080  Sum_probs=54.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+|||||||||||++|+++|+++||+|++++|..+..    ....+..+. ..+++++++|++|...+.+.+..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~----~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   70 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD----TRWRLRELGIEGDIQYEDGDMADACSVQRAVIK   70 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC----CCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc----cHHHHHHhcccCCcEEEEccccChHHhhhhhcc
Confidence            5899999999999999999999999999999976432    112222222 34789999999999988886544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.5e-14  Score=98.07  Aligned_cols=72  Identities=14%  Similarity=0.061  Sum_probs=52.6

Q ss_pred             CeE-EEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh----hhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKK-LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH----KEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~i-lItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~----~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ||| ||||||||||++|+++|+++||+|++++|..+.. +..+.+.+    ......+++++++|++|++.+...+..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   77 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF-NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE   77 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC-CCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCccc-chhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh
Confidence            578 9999999999999999999999999999975432 11121111    111123689999999999999887644

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=2.3e-14  Score=97.74  Aligned_cols=70  Identities=14%  Similarity=0.095  Sum_probs=55.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |.|||||||||||++|+++|+++||+|++++|..+..  .........+...+++++++|++|.+.++..+.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~   71 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST--YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFK   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcc--hhHHHhHHhhcccCCeEEEeecCCHHHHHHHHh
Confidence            4699999999999999999999999999998765432  222222233445689999999999999988753

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=1.7e-14  Score=99.21  Aligned_cols=71  Identities=13%  Similarity=0.031  Sum_probs=49.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh---hhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH---KEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~---~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |.+||||||||||++|+++|++.||+|++++|..+.. +..+.+.+   ......+++++++|++|.+.+.+.+.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSF-NTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILR   75 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCccc-chhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHh
Confidence            6789999999999999999999999999999975432 11221111   11223478999999999999998763

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.49  E-value=6.7e-14  Score=95.41  Aligned_cols=65  Identities=15%  Similarity=0.108  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSS   76 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~   76 (91)
                      .+|+|+|||||||||++++++|+++||+|++++|+.+..    +...+  ....+++++++|+.|..++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~----~~~~~--~~~~~v~~~~gD~~d~~~~~~   66 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL----IAEEL--QAIPNVTLFQGPLLNNVPLMD   66 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH----HHHHH--HTSTTEEEEESCCTTCHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh----hhhhh--cccCCCEEEEeeCCCcHHHHH
Confidence            568999999999999999999999999999999976421    22211  223589999999998665443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.48  E-value=5.4e-14  Score=97.17  Aligned_cols=72  Identities=13%  Similarity=0.119  Sum_probs=52.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC-------------CCCC-CcchHHHhhhhcCCCeEEEEeeCCChhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV-------------TQNS-RPSKLEIHKEFQGIGVTIIENLCDVGQV   73 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~-------------~~~~-~~~~~~~~~~l~~~~v~~v~gDl~d~~~   73 (91)
                      |||||||||||||++|+++|++.||+|+++++..             .+.. .++.......+...+++++++|++|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            7999999999999999999999999999997311             0100 0111112223344579999999999999


Q ss_pred             hhHHHh
Q 037506           74 TSSQRM   79 (91)
Q Consensus        74 l~~~~~   79 (91)
                      +.+++.
T Consensus        82 l~~~~~   87 (393)
T d1i24a_          82 LAESFK   87 (393)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988763

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.47  E-value=8.6e-14  Score=93.87  Aligned_cols=72  Identities=13%  Similarity=0.047  Sum_probs=52.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh----hhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH----KEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~----~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +|++||||||||||+||+++|+++||+|++++|..+.. +..+...+    .......++++.+|+++.+.+...+.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~   76 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNF-NTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWID   76 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC-CCTTTTTTC--------CCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCccc-chhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHh
Confidence            47899999999999999999999999999999965422 11111111    11223457899999999998887653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.45  E-value=1.5e-13  Score=94.68  Aligned_cols=69  Identities=17%  Similarity=0.150  Sum_probs=49.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |||||||||||||++|+++|++.||+|++..++.+.........  ......+++++++|++|+..+.+.+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~l~~~~   69 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS--DISESNRYNFEHADICDSAEITRIF   69 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT--TTTTCTTEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH--hhhhcCCcEEEEccCCCHHHHHHHH
Confidence            68999999999999999999999998655444322211111111  1122457999999999999888765

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.44  E-value=2.3e-13  Score=93.01  Aligned_cols=64  Identities=11%  Similarity=0.027  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+|||||||||||||++|+++|+++||+|++++|..... ..      .  .....++..+|++|.+.+.+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~-~~------~--~~~~~~~~~~D~~~~~~~~~~~   77 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-MT------E--DMFCDEFHLVDLRVMENCLKVT   77 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-SC------G--GGTCSEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc-hh------h--hcccCcEEEeechhHHHHHHHh
Confidence            368999999999999999999999999999998765322 01      1  1125688889999988877754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=2.3e-13  Score=92.16  Aligned_cols=65  Identities=9%  Similarity=0.123  Sum_probs=50.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |||||||||||||++|+++|+++| ++|+++++....     ..   .....++++++++|+++.+.+.+...+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~-----~~---~~~~~~~~~~i~~Di~~~~~~~~~~~~   66 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-----IS---RFLNHPHFHFVEGDISIHSEWIEYHVK   66 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG-----GG---GGTTCTTEEEEECCTTTCSHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc-----hh---hhccCCCeEEEECccCChHHHHHHHHh
Confidence            689999999999999999999999 589999886421     11   112345799999999987766664444

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.6e-13  Score=89.56  Aligned_cols=66  Identities=14%  Similarity=0.079  Sum_probs=52.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +|.+++|+|||||||||++++++|+++|+  +|++++|++...  ..     .  ....++++.+|+.+.+.+..++
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~--~~-----~--~~~~i~~~~~D~~~~~~~~~~~   78 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF--DE-----E--AYKNVNQEVVDFEKLDDYASAF   78 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC--CS-----G--GGGGCEEEECCGGGGGGGGGGG
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhh--cc-----c--ccceeeeeeecccccccccccc
Confidence            46778999999999999999999999984  899999976433  11     1  1125788888998888887764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.39  E-value=5.9e-13  Score=90.34  Aligned_cols=72  Identities=13%  Similarity=0.078  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh----hcCCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE----FQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~----l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +.+|+|||||||||||++|+++|++.||+|++++|..+..  .........    .....++++.+|+.|...+....
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH--QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcc--hhhHHHHHHhhhhcccCCeeEEeecccccccccccc
Confidence            4567999999999999999999999999999999865432  111111111    11246899999999988777654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.38  E-value=9.8e-13  Score=90.56  Aligned_cols=73  Identities=14%  Similarity=0.237  Sum_probs=50.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHh-CCCcEEEEecCCCCCC---Ccc-hHHH---hhh-------hcCCCeEEEEeeCCCh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTQNS---RPS-KLEI---HKE-------FQGIGVTIIENLCDVG   71 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~---~~~-~~~~---~~~-------l~~~~v~~v~gDl~d~   71 (91)
                      .|||||||||||||++|+++|++ .||+|+++++......   ..+ +...   +..       .....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            47999999999999999999996 7899999986332110   001 1111   110       1123578999999999


Q ss_pred             hhhhHHHh
Q 037506           72 QVTSSQRM   79 (91)
Q Consensus        72 ~~l~~~~~   79 (91)
                      +.+++.+.
T Consensus        82 ~~l~~~~~   89 (383)
T d1gy8a_          82 DFLNGVFT   89 (383)
T ss_dssp             HHHHHHHH
T ss_pred             HHhhhhhh
Confidence            99988763

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.35  E-value=7.5e-13  Score=84.05  Aligned_cols=63  Identities=13%  Similarity=0.128  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEE--EEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTF--VYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~--~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+++|||||||||||++++++|+++||+|.  .++|++      ++.   ..+ ..+++++.+|+.|.+.+.+++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~------~~~---~~~-~~~~~~~~~d~~~~~~~~~~~   66 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA------QGK---EKI-GGEADVFIGDITDADSINPAF   66 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCH------HHH---HHT-TCCTTEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCH------HHH---Hhc-cCCcEEEEeeecccccccccc
Confidence            468999999999999999999999997754  456653      222   122 237899999999999998875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.33  E-value=2.7e-13  Score=92.39  Aligned_cols=66  Identities=17%  Similarity=0.099  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh---hc--CCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE---FQ--GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~---l~--~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .++|||||||||||++|+++|+++||+|++++|+.+      +...+..   ..  .....++.+|+.|.+.+..++
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSAS------KLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCch------hHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            479999999999999999999999999999999642      2221111   11  123456789999998888765

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.25  E-value=2.2e-11  Score=80.57  Aligned_cols=78  Identities=15%  Similarity=0.100  Sum_probs=61.7

Q ss_pred             CCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            2 EGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         2 ~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +|+.+.|.++||||++.||+.+++.|+++|++|.+.+|+.      ++.+ ...++. ....++++|++|++.+++.+..
T Consensus         1 ~G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~   73 (244)
T d1nffa_           1 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD------EEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDT   73 (244)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhh-CcceEEEeecCCHHHHHHHHHH
Confidence            5788999999999999999999999999999999999964      2332 223332 3678899999999999987655


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-...|
T Consensus        74 ~~~~~g   79 (244)
T d1nffa_          74 AVTAFG   79 (244)
T ss_dssp             HHHHHS
T ss_pred             HHHHhC
Confidence            444444

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.24  E-value=3e-11  Score=79.53  Aligned_cols=77  Identities=16%  Similarity=0.169  Sum_probs=59.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      |+++.|+||||++.||..++++|+++|+  .|++..|+.      ++.+.+.+....++.++.+|++|++++++.+..-.
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~------~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~   74 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV------EKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVG   74 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG------GGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCH------HHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHH
Confidence            5678999999999999999999999995  677778864      23333334444578999999999999998865555


Q ss_pred             hhhhc
Q 037506           83 RSLGH   87 (91)
Q Consensus        83 ~~~~~   87 (91)
                      ..+|.
T Consensus        75 ~~~~~   79 (250)
T d1yo6a1          75 EIVGS   79 (250)
T ss_dssp             HHHGG
T ss_pred             HHhCC
Confidence            55554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-11  Score=82.62  Aligned_cols=36  Identities=28%  Similarity=0.503  Sum_probs=33.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +|||||||||||||++|+++|+++||+|++++|..+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~   36 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT   36 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCc
Confidence            479999999999999999999999999999998543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.21  E-value=5.9e-11  Score=78.14  Aligned_cols=77  Identities=10%  Similarity=0.092  Sum_probs=60.3

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      |+...|+++||||++.||+.+++.|.++|++|++.+|+.      ++.. ...++ ...+.++++|++|++.+++.+...
T Consensus         1 g~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~-~~~~~~~~~Dls~~~~i~~~~~~i   73 (241)
T d2a4ka1           1 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE------RLLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEA   73 (241)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CcCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHc-CCceEEEEecCCCHHHHHHHHHHH
Confidence            567789999999999999999999999999999999974      2222 22223 236788999999999999876555


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ...+|
T Consensus        74 ~~~~g   78 (241)
T d2a4ka1          74 LEEFG   78 (241)
T ss_dssp             HHHHS
T ss_pred             HHHhC
Confidence            44444

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.19  E-value=6e-11  Score=79.77  Aligned_cols=68  Identities=12%  Similarity=0.170  Sum_probs=47.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEE------EEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTF------VYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~------~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |||+|||||||||++|+++|+++||+|.      .+++..... ......  ......+++++.+|+.+........
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~-~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~   74 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG-NRANLA--PVDADPRLRFVHGDIRDAGLLAREL   74 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC-CGGGGG--GGTTCTTEEEEECCTTCHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccc-cHhHhh--hhhcCCCeEEEEeccccchhhhccc
Confidence            6899999999999999999999998654      444433222 111111  1122457899999999988777653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.19  E-value=8.2e-12  Score=81.77  Aligned_cols=34  Identities=24%  Similarity=0.193  Sum_probs=32.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||||||||||||++|+++|.++||+|++++|..
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            6899999999999999999999999999999865

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=6.4e-11  Score=78.09  Aligned_cols=72  Identities=18%  Similarity=0.112  Sum_probs=58.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+-..+.|+++||||++.||+++++.|.++|++|.+.+|+.      ++.+. ..++  .++..+.+|++|++.+++.+.
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~------~~l~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ------ADLDSLVREC--PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHS--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH------HHHHHHHHhc--CCCeEEEEeCCCHHHHHHHHH
Confidence            66667789999999999999999999999999999999963      23222 2222  368899999999999988764


Q ss_pred             h
Q 037506           80 R   80 (91)
Q Consensus        80 ~   80 (91)
                      .
T Consensus        73 ~   73 (244)
T d1pr9a_          73 S   73 (244)
T ss_dssp             T
T ss_pred             H
Confidence            3

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.14  E-value=2.4e-10  Score=75.37  Aligned_cols=78  Identities=12%  Similarity=0.118  Sum_probs=58.9

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      ++..|.++||||++.||+.+++.|.++|++|.+.+|+..    ......+... ...+..+.+|++|++.+++.+...-.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~----~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA----PEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch----HHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            456788999999999999999999999999999999742    1112222222 34678999999999999987655444


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      .+|
T Consensus        77 ~~G   79 (247)
T d2ew8a1          77 TFG   79 (247)
T ss_dssp             HHS
T ss_pred             HcC
Confidence            444

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.13  E-value=2.4e-10  Score=75.25  Aligned_cols=74  Identities=12%  Similarity=0.046  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +..|.++||||++.||+.+++.|.++|++|.+.+|+.      ++.+..  .+..+.+.+.+|++|++++++.+...-..
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~------~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE------GPLREA--AEAVGAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHH--HHTTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHH--HHHcCCeEEEEecCCHHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999999963      222221  22346789999999999999987555454


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        75 ~g   76 (242)
T d1ulsa_          75 LG   76 (242)
T ss_dssp             HS
T ss_pred             cC
Confidence            54

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.12  E-value=7.4e-11  Score=78.22  Aligned_cols=79  Identities=15%  Similarity=0.167  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      ..|.++||||++.||+.+++.|.++|++|.+.+|+....  .+..+.+.......+.++.+|++|++.+++.+.......
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~--~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA--VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH--HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999976321  111111111123467889999999999998765544444


Q ss_pred             h
Q 037506           86 G   86 (91)
Q Consensus        86 ~   86 (91)
                      |
T Consensus        86 g   86 (260)
T d1h5qa_          86 G   86 (260)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.12  E-value=9.5e-11  Score=78.43  Aligned_cols=79  Identities=18%  Similarity=0.063  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      ...|.++|||||+.||++++++|+++|++|++.+|+....  .+..+.+.......+.++.+|++|++.+.+.+......
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l--~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL--KATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH--HHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            4458899999999999999999999999999999974211  00111111112346788999999999998876444333


Q ss_pred             h
Q 037506           85 L   85 (91)
Q Consensus        85 ~   85 (91)
                      .
T Consensus       101 ~  101 (294)
T d1w6ua_         101 A  101 (294)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.12  E-value=1.6e-10  Score=76.50  Aligned_cols=75  Identities=15%  Similarity=0.064  Sum_probs=58.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      .+.|.++||||++.||+++++.|+++|++|.+.+|+.      ++.+ ...++ ...+..+.+|++|++.+++.+...-.
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~------~~l~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINL------EAARATAAEI-GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCH------HHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHh-CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999963      2222 22333 34688899999999999998655444


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      ..|
T Consensus        76 ~~g   78 (256)
T d1k2wa_          76 RWG   78 (256)
T ss_dssp             HHS
T ss_pred             HhC
Confidence            444

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.11  E-value=1e-10  Score=77.39  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..|.++||||++.||+.+++.|.++|++|.+.+|+...     ..+...++   ....+.++.+|++|++.+++.+...
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-----~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   77 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEE-----ASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV   77 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH
Confidence            456889999999999999999999999999999997421     11111222   1335788999999999999987555


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus        78 ~~~~g   82 (251)
T d1vl8a_          78 KEKFG   82 (251)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            45555

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.10  E-value=2.9e-10  Score=75.58  Aligned_cols=77  Identities=12%  Similarity=0.090  Sum_probs=59.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC-CCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG-IGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ++..|.++||||++.||..+++.|+++|++|++.+|+.      ++.+ ...++.. ..+.++.+|++|++.+++.+...
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~------~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD------DHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT   76 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHH
Confidence            56678999999999999999999999999999999964      2222 2233332 34788999999999999987555


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ....|
T Consensus        77 ~~~~g   81 (268)
T d2bgka1          77 IAKHG   81 (268)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            45444

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.09  E-value=3e-10  Score=75.89  Aligned_cols=75  Identities=21%  Similarity=0.197  Sum_probs=57.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      ...|.++||||++.||+++++.|.++|++|.+.+|+.      ++...+ .++ ...+..+.+|++|++.+++.+...-.
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~------~~l~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA------ERLAELETDH-GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHc-CCCeeEEecccccHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999963      332222 222 23688999999999999887655444


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      .+|
T Consensus        76 ~~g   78 (276)
T d1bdba_          76 RFG   78 (276)
T ss_dssp             HHS
T ss_pred             HhC
Confidence            444

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.08  E-value=5.3e-10  Score=73.83  Aligned_cols=75  Identities=15%  Similarity=0.118  Sum_probs=58.8

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      ..+.|.++||||++.||+.+++.|.++|++|.+.+|+.      +..+..+.   .+..++++|++|++++++.+...-.
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~------~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP------EGKEVAEA---IGGAFFQVDLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST------THHHHHHH---HTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHH---cCCeEEEEeCCCHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999974      22222222   2567899999999999988755555


Q ss_pred             hhhc
Q 037506           84 SLGH   87 (91)
Q Consensus        84 ~~~~   87 (91)
                      .+|.
T Consensus        73 ~~G~   76 (248)
T d2d1ya1          73 ALGR   76 (248)
T ss_dssp             HHSC
T ss_pred             hcCC
Confidence            5553

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.08  E-value=2e-10  Score=76.23  Aligned_cols=78  Identities=13%  Similarity=0.062  Sum_probs=60.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG--IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +...|.++||||++.||+.+++.|.++|++|.+.+|+.      ++.+ ....+..  ..+..+.+|++|++.+++.+..
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~------~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR------EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS   75 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999964      2222 2222332  3578899999999999998765


Q ss_pred             hhhhhhc
Q 037506           81 SGRSLGH   87 (91)
Q Consensus        81 ~~~~~~~   87 (91)
                      ....+|.
T Consensus        76 ~~~~~g~   82 (260)
T d1zema1          76 VVRDFGK   82 (260)
T ss_dssp             HHHHHSC
T ss_pred             HHHHhCC
Confidence            5555554

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=6.9e-11  Score=78.18  Aligned_cols=76  Identities=11%  Similarity=0.085  Sum_probs=57.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      .|.++||||++.||+++++.|.++|++|.+.+|+...     ..+....+    ....+.++.+|++|++.+++.+...-
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA-----GVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   77 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            4679999999999999999999999999999997421     11111222    22357889999999999999875555


Q ss_pred             hhhhc
Q 037506           83 RSLGH   87 (91)
Q Consensus        83 ~~~~~   87 (91)
                      ..+|.
T Consensus        78 ~~~G~   82 (254)
T d2gdza1          78 DHFGR   82 (254)
T ss_dssp             HHHSC
T ss_pred             HHcCC
Confidence            55553

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.07  E-value=3.3e-10  Score=74.57  Aligned_cols=74  Identities=11%  Similarity=0.045  Sum_probs=57.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      ..|.++||||++.||+++++.|+++|++|.+.+|+.      ++.+.+ .++ ......+.+|++|++.+++.+...-..
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~------~~l~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE------NGAQAISDYL-GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHHh-CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            467899999999999999999999999999999963      232222 223 236788999999999999876554444


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        76 ~g   77 (243)
T d1q7ba_          76 FG   77 (243)
T ss_dssp             TC
T ss_pred             cC
Confidence            44

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=5.4e-10  Score=73.93  Aligned_cols=76  Identities=17%  Similarity=0.146  Sum_probs=59.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      +...|.++||||++.||+++++.|+++|++|.+.+|+.      ++.+.+.. +..+..++.+|++|++.+++.+...-.
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~------~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE------SGGRALEQ-ELPGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHH-HCTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHH-hcCCCeEEEccCCCHHHHHHHHHHHHH
Confidence            35678899999999999999999999999999999963      23332222 123678999999999999998755555


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      ..|
T Consensus        76 ~~g   78 (250)
T d1ydea1          76 RFG   78 (250)
T ss_dssp             HHS
T ss_pred             hcC
Confidence            544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.07  E-value=4.9e-10  Score=74.36  Aligned_cols=75  Identities=12%  Similarity=0.065  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      ...|.++||||++.||++++++|+++|++|.+.+|+.      ++.. ...++. ..+.++++|++|++.+++.+...-.
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~------~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD------EEGAATARELG-DAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHTTG-GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhC-CceEEEEcccCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999964      2222 223332 3588999999999999987655444


Q ss_pred             hhh
Q 037506           84 SLG   86 (91)
Q Consensus        84 ~~~   86 (91)
                      ..|
T Consensus        76 ~~g   78 (254)
T d1hdca_          76 EFG   78 (254)
T ss_dssp             HHS
T ss_pred             HcC
Confidence            444

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.06  E-value=1.6e-10  Score=76.71  Aligned_cols=77  Identities=16%  Similarity=0.082  Sum_probs=58.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhh----cCCCeEEEEeeCCChhhhhHHHh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEF----QGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l----~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ...|.++||||++.||+.+++.|.++|++|.+.+|+.      ++.+. ...+    ....+..+.+|++|++++++.+.
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~------~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~   75 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS------EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVT   75 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHH
Confidence            4568899999999999999999999999999999974      22211 1111    22357888999999999999876


Q ss_pred             hhhhhhhc
Q 037506           80 RSGRSLGH   87 (91)
Q Consensus        80 ~~~~~~~~   87 (91)
                      ..-..+|.
T Consensus        76 ~~~~~~G~   83 (258)
T d1iy8a_          76 ATTERFGR   83 (258)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHHhCC
Confidence            55555553

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.06  E-value=1.4e-10  Score=77.11  Aligned_cols=81  Identities=16%  Similarity=0.115  Sum_probs=60.0

Q ss_pred             CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506            1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~   77 (91)
                      |-...+.|.++||||++.||++++++|.++|++|.+.+|+..     +..+ ....+.  ...+.++++|++|++.+++.
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~   75 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE-----DEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            444467789999999999999999999999999999999741     1221 122222  23467889999999999987


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +...-..+|
T Consensus        76 ~~~~~~~~G   84 (261)
T d1geea_          76 VQSAIKEFG   84 (261)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhC
Confidence            655444444

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.06  E-value=2.3e-10  Score=75.95  Aligned_cols=75  Identities=13%  Similarity=0.128  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhcC--CCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQG--IGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..|.++||||++.||+++++.|.++|++|.+.+|+.      ++. +...++..  ..+.++.+|++|++.+++.+....
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~------~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ------KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999999964      222 22223322  346788999999999998765444


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        81 ~~~~   84 (259)
T d2ae2a_          81 NHFH   84 (259)
T ss_dssp             HHTT
T ss_pred             HHhC
Confidence            4454

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.05  E-value=4.7e-10  Score=74.09  Aligned_cols=77  Identities=14%  Similarity=0.094  Sum_probs=59.9

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc-CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ-GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~-~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      |.+.|.++||||++.||+++++.|.++|++|.+.+|+.      ++.+. ...+. ...+.++.+|++|++.+++.+...
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS------DVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT   76 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            56778999999999999999999999999999999964      22222 22232 236889999999999999887555


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus        77 ~~~~G   81 (251)
T d1zk4a1          77 EKAFG   81 (251)
T ss_dssp             HHHHS
T ss_pred             HHHhC
Confidence            55554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.7e-10  Score=75.45  Aligned_cols=78  Identities=21%  Similarity=0.250  Sum_probs=60.2

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc-------CCCeEEEEeeCCChhhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ-------GIGVTIIENLCDVGQVT   74 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~-------~~~v~~v~gDl~d~~~l   74 (91)
                      |+...|.++||||++.||+++++.|+++|++|++.+|+..      +.+ ...++.       ...+.++.+|++|++.+
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~------~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v   81 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE------RLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   81 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhhhccccCceEEEEeccCCCHHHH
Confidence            5677899999999999999999999999999999999742      211 111121       23578899999999999


Q ss_pred             hHHHhhhhhhhh
Q 037506           75 SSQRMRSGRSLG   86 (91)
Q Consensus        75 ~~~~~~~~~~~~   86 (91)
                      ++.+...-..+|
T Consensus        82 ~~~~~~~~~~~G   93 (297)
T d1yxma1          82 NNLVKSTLDTFG   93 (297)
T ss_dssp             HHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhC
Confidence            998755555555

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.04  E-value=1.5e-10  Score=76.74  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-h---hhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-K---EFQGIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~---~l~~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ..|.++||||++.||+.++++|.++|++|.+.+|+..     +..+.. .   ......+.++.+|++|++++++.+...
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~-----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   77 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-----AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA   77 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCH-----HHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcH-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999998641     222111 1   122346788999999999999987555


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -..+|
T Consensus        78 ~~~~G   82 (260)
T d1x1ta1          78 VRQMG   82 (260)
T ss_dssp             HHHHS
T ss_pred             HHHhC
Confidence            55555

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.04  E-value=5.9e-10  Score=73.10  Aligned_cols=69  Identities=22%  Similarity=0.111  Sum_probs=52.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHh---CCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVS---SGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ||+|+||||++.||..++++|++   +|++|++..|+....   +....+.. ...++.++.+|++|++++++.+.
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~   73 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA---KELEDLAK-NHSNIHILEIDLRNFDAYDKLVA   73 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC---HHHHHHHH-HCTTEEEEECCTTCGGGHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH---HHHHHHHh-cCCcEEEEEEEeccHHHHHHHHh
Confidence            46899999999999999999974   789999999986432   11211111 23478999999999999988653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=7.3e-11  Score=78.70  Aligned_cols=36  Identities=19%  Similarity=0.284  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +++||||||||||||++|+++|+++||.|+++++..
T Consensus         1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~   36 (315)
T d1e6ua_           1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD   36 (315)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch
Confidence            467999999999999999999999999988876543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=4.4e-10  Score=73.97  Aligned_cols=68  Identities=22%  Similarity=0.120  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      .+.|+++||||++.||+.+++.|.++|++|.+.+|+.      ++... ..++  .++..+.+|++|++.+++.+..
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~------~~l~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~   71 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN------SDLVSLAKEC--PGIEPVCVDLGDWDATEKALGG   71 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHhc--CCCeEEEEeCCCHHHHHHHHHH
Confidence            3568899999999999999999999999999999963      22222 2222  3688999999999999887643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.04  E-value=4.8e-10  Score=74.19  Aligned_cols=76  Identities=16%  Similarity=0.121  Sum_probs=59.1

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +...|.++||||++.||+++++.|+++|++|.+.+|+.      ++.+ ...++ .....++++|++|++.+++.+....
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~------~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~   75 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE------AAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQ   75 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH------HHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHh-CCCeEEEEeecCCHHHHHHHHHHHH
Confidence            46678999999999999999999999999999999863      2222 22333 3457889999999999998865554


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        76 ~~~g   79 (253)
T d1hxha_          76 RRLG   79 (253)
T ss_dssp             HHHC
T ss_pred             HHhC
Confidence            4444

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=3e-10  Score=75.26  Aligned_cols=75  Identities=17%  Similarity=0.077  Sum_probs=57.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..|.++||||++.||++++++|.++|++|.+.+|+.      ++.+ ...++.  ...+.++++|++|++.+++.+...-
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~------~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA------DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999864      2222 222232  2357889999999999998765555


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        84 ~~~g   87 (255)
T d1fmca_          84 SKLG   87 (255)
T ss_dssp             HHHS
T ss_pred             HHcC
Confidence            5555

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.2e-10  Score=75.91  Aligned_cols=75  Identities=17%  Similarity=0.090  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcC----CCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQG----IGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~----~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..|.++||||++.||+++++.|.++|++|++.+|+.      ++.+. ..++..    ..+.++.+|++|++.+.+.+..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~------~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV------GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999974      22222 222321    2467889999999999997655


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-..+|
T Consensus        83 ~~~~~g   88 (257)
T d1xg5a_          83 IRSQHS   88 (257)
T ss_dssp             HHHHHC
T ss_pred             HHHhcC
Confidence            555454

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.01  E-value=6e-10  Score=73.56  Aligned_cols=75  Identities=11%  Similarity=0.036  Sum_probs=57.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC--CCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG--IGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      ..|.++||||++.||+++++.|.++|++|.+.+|+.      ++.+ ...++..  ..+.++.+|++|++.+.+.+...-
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~------~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ------KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999964      2222 2223332  357889999999999998865544


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ...|
T Consensus        83 ~~~g   86 (251)
T d2c07a1          83 TEHK   86 (251)
T ss_dssp             HHCS
T ss_pred             HhcC
Confidence            4444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.00  E-value=1.6e-10  Score=73.65  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      +|+|+|||||||||++++++|++++|  +|++++|+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            58999999999999999999999997  566677754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.00  E-value=7.8e-10  Score=73.66  Aligned_cols=76  Identities=13%  Similarity=0.111  Sum_probs=57.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc-----CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ-----GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~-----~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+.|.++||||++.||+.+++.|.++|++|.+.+|+.      ++.+. ...+.     ...+..+.+|++|++.+++.+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~------~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~   76 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSS------ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQII   76 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHH
Confidence            4568899999999999999999999999999999974      22221 12222     224789999999999999876


Q ss_pred             hhhhhhhh
Q 037506           79 MRSGRSLG   86 (91)
Q Consensus        79 ~~~~~~~~   86 (91)
                      .......|
T Consensus        77 ~~~~~~~g   84 (272)
T d1xkqa_          77 NSTLKQFG   84 (272)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhC
Confidence            55444444

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.00  E-value=6.1e-10  Score=73.84  Aligned_cols=75  Identities=13%  Similarity=0.126  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ...|+++||||++.||++++++|+++|++|.+.+|+..      +.+ ..+.+.  ...+.++.+|++|++.+++.+...
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~------~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~   77 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK------ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV   77 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHH
Confidence            35688999999999999999999999999999999742      221 122222  235678899999999998876444


Q ss_pred             hhhh
Q 037506           82 GRSL   85 (91)
Q Consensus        82 ~~~~   85 (91)
                      ...+
T Consensus        78 ~~~~   81 (258)
T d1ae1a_          78 AHVF   81 (258)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            4444

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=6e-10  Score=73.52  Aligned_cols=75  Identities=16%  Similarity=0.121  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG   82 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~   82 (91)
                      +.+.++||||++.||+.++++|.++|++|.+.+|+.      ++.+. ..++.  ...+..+.+|++|++.+++.+...-
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~------~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK------HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999974      22221 12222  2357889999999999999875554


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ..+|
T Consensus        80 ~~~g   83 (244)
T d1yb1a_          80 AEIG   83 (244)
T ss_dssp             HHTC
T ss_pred             HHcC
Confidence            5555

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.99  E-value=9.5e-10  Score=72.17  Aligned_cols=67  Identities=16%  Similarity=0.145  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      ..|+++||||++.||+.+++.|.++|++|.+.+|+....              ..+..+++|++|++.+++.+...-..+
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999975321              146778999999999998765544444


Q ss_pred             h
Q 037506           86 G   86 (91)
Q Consensus        86 ~   86 (91)
                      |
T Consensus        72 g   72 (237)
T d1uzma1          72 G   72 (237)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.99  E-value=2e-10  Score=75.20  Aligned_cols=32  Identities=22%  Similarity=0.307  Sum_probs=27.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |||||||||||||++|+++|.+.|+.|.+..|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~   32 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVH   32 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEECC
Confidence            68999999999999999999999875544433

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.98  E-value=7.1e-10  Score=73.66  Aligned_cols=77  Identities=14%  Similarity=0.075  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..|.++||||++.||..+++.|+++|++|++.+|+..     +..+. ...+.  ...+.++++|++|++.+.+.+...
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST-----ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCch-----HHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH
Confidence            44589999999999999999999999999999988642     22221 12222  235788999999999999987554


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -...|
T Consensus        91 ~~~~g   95 (272)
T d1g0oa_          91 VKIFG   95 (272)
T ss_dssp             HHHHS
T ss_pred             HHHhC
Confidence            44444

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.98  E-value=1.1e-09  Score=72.09  Aligned_cols=81  Identities=12%  Similarity=0.030  Sum_probs=57.1

Q ss_pred             CCCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            2 EGKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         2 ~~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      .-.+..|+++||||+|  .||+.++++|.++|++|.+.+|+....   +...... .......++++|++|++.+++.+.
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~---~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~   78 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR---PEAEKLA-EALGGALLFRADVTQDEELDALFA   78 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGH---HHHHHHH-HHTTCCEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHH---HHHHHhh-hccCcccccccccCCHHHHHHHHH
Confidence            3456778999999987  699999999999999998888863210   1111111 112356889999999999998765


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      ..-...|
T Consensus        79 ~~~~~~g   85 (256)
T d1ulua_          79 GVKEAFG   85 (256)
T ss_dssp             HHHHHHS
T ss_pred             HHHHhcC
Confidence            5444444

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.97  E-value=3.9e-10  Score=71.70  Aligned_cols=70  Identities=14%  Similarity=0.200  Sum_probs=54.4

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      +..+.|+++||||+|.||+.+++.|.++|++|+++.|+.      ++.... ..+. ...+.+..+|+.|.+.+++++
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL------DKAQAAADSVNKRFKVNVTAAETADDASRAEAV   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH------HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccch------HHHHHHHHHHHhccchhhhhhhcccHHHHHHHh
Confidence            346789999999999999999999999999999999974      222211 1121 235677889999999998865

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.97  E-value=4.6e-10  Score=74.90  Aligned_cols=76  Identities=11%  Similarity=0.090  Sum_probs=57.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc-----CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ-----GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~-----~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ...|.++||||++.||+++++.|+++|++|.+.+|+.      ++.+. ..++.     ...+..+.+|++|++.+++.+
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~------~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE------DRLEETKQQILKAGVPAEKINAVVADVTEASGQDDII   75 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHH
Confidence            4568899999999999999999999999999999964      22221 12221     235789999999999999876


Q ss_pred             hhhhhhhh
Q 037506           79 MRSGRSLG   86 (91)
Q Consensus        79 ~~~~~~~~   86 (91)
                      ...-..+|
T Consensus        76 ~~~~~~~G   83 (274)
T d1xhla_          76 NTTLAKFG   83 (274)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHcC
Confidence            55444444

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.97  E-value=1.1e-09  Score=72.58  Aligned_cols=77  Identities=12%  Similarity=0.123  Sum_probs=57.6

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc-----CCCeEEEEeeCCChhhhhHH
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ-----GIGVTIIENLCDVGQVTSSQ   77 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~-----~~~v~~v~gDl~d~~~l~~~   77 (91)
                      +...|.++||||++.||+.++++|+++|++|.+.+|+.      ++.+ ...++.     ..++.++.+|++|++.+++.
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~------~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~   75 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHA------ERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI   75 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHH
Confidence            45678899999999999999999999999999999974      2221 112221     23588999999999999987


Q ss_pred             Hhhhhhhhh
Q 037506           78 RMRSGRSLG   86 (91)
Q Consensus        78 ~~~~~~~~~   86 (91)
                      +...-...|
T Consensus        76 ~~~~~~~~g   84 (264)
T d1spxa_          76 LSTTLGKFG   84 (264)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhC
Confidence            644433333

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.97  E-value=1.4e-09  Score=71.88  Aligned_cols=79  Identities=14%  Similarity=0.051  Sum_probs=55.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-hcCCCeEEEEeeCC-ChhhhhHHHhhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIENLCD-VGQVTSSQRMRSG   82 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l~~~~v~~v~gDl~-d~~~l~~~~~~~~   82 (91)
                      .+.|.++||||++.||..++++|+++|.+|+++.|+....   +....+.. ....++.++.+|++ +.+.+++.+...-
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP---TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH---HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccH---HHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            4678899999999999999999999999999998875321   11221111 22346788999997 5566777654444


Q ss_pred             hhhh
Q 037506           83 RSLG   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ...|
T Consensus        80 ~~~g   83 (254)
T d1sbya1          80 DQLK   83 (254)
T ss_dssp             HHHS
T ss_pred             HHcC
Confidence            4444

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.97  E-value=5.5e-10  Score=74.10  Aligned_cols=75  Identities=19%  Similarity=0.131  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      +..|.++||||++.||..+++.|+++|++|.+.+|+.      ++.+ ....+.  ...+..+.+|++|++.+++.+...
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~------~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE------YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999974      2221 222222  235788999999999998876444


Q ss_pred             hhhh
Q 037506           82 GRSL   85 (91)
Q Consensus        82 ~~~~   85 (91)
                      ...+
T Consensus        80 ~~~~   83 (259)
T d1xq1a_          80 SSMF   83 (259)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4444

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.95  E-value=1.1e-09  Score=72.36  Aligned_cols=73  Identities=14%  Similarity=0.125  Sum_probs=55.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSGRSL   85 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~~~~   85 (91)
                      -++||||++.||+.+++.|.++|++|.+.+|+.      ++.+ ...++.  ...+.++.+|++|++++.+.+...-..+
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~------~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYND------ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            359999999999999999999999999999974      2222 122222  2357889999999999999875555555


Q ss_pred             hc
Q 037506           86 GH   87 (91)
Q Consensus        86 ~~   87 (91)
                      |.
T Consensus        77 g~   78 (255)
T d1gega_          77 GG   78 (255)
T ss_dssp             TC
T ss_pred             CC
Confidence            53

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.93  E-value=1.3e-09  Score=71.97  Aligned_cols=77  Identities=13%  Similarity=0.057  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      ...|.++||||++.||.++++.|+++|++|++..|...     +..+ ....+.  ...+..+.+|++|++.+++.+...
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~   78 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS-----KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA   78 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCCh-----HHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999998777532     2211 122222  235788999999999999877555


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      ....|
T Consensus        79 ~~~~g   83 (259)
T d1ja9a_          79 VSHFG   83 (259)
T ss_dssp             HHHHS
T ss_pred             HHHcC
Confidence            44444

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.92  E-value=1.9e-09  Score=64.65  Aligned_cols=64  Identities=16%  Similarity=0.177  Sum_probs=51.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++      ++...+..  ..+..++.||.+|++.+.++-..
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~------~~~~~~~~--~~~~~vi~Gd~~~~~~l~~~~i~   64 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK------DICKKASA--EIDALVINGDCTKIKTLEDAGIE   64 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHH--HCSSEEEESCTTSHHHHHHTTTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCCh------hhhhhhhh--hhhhhhccCcccchhhhhhcChh
Confidence            68999999 9999999999999999999999863      44433222  22678999999999998887433

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.92  E-value=1.6e-09  Score=71.47  Aligned_cols=73  Identities=19%  Similarity=0.140  Sum_probs=55.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      |.++||||++.||+++++.|.++|++|.+.+|+.      ++.+ ...++.  ...+.++++|++|++.+++.+...-..
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~------~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGE------EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   76 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5679999999999999999999999999999964      2222 122232  235788999999999999876554444


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      +|
T Consensus        77 ~g   78 (257)
T d2rhca1          77 YG   78 (257)
T ss_dssp             TC
T ss_pred             hC
Confidence            44

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.90  E-value=4.4e-09  Score=68.87  Aligned_cols=73  Identities=10%  Similarity=-0.007  Sum_probs=54.5

Q ss_pred             CCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |.+..|+++||||+|  .||.++++.|.++|++|.+..|+..     ...+.+.+........+++|+.+++.+.+.+-.
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~-----~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~   76 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL-----RLIQRITDRLPAKAPLLELDVQNEEHLASLAGR   76 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCH-----HHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChH-----HHHHHHHHHcCCceeeEeeecccccccccccch
Confidence            678889999999754  5999999999999999999988641     112222232334577899999999877776433

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.88  E-value=6.6e-09  Score=68.40  Aligned_cols=80  Identities=13%  Similarity=0.017  Sum_probs=58.4

Q ss_pred             CCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |.+..|+++||||+|  .||.+++++|+++|++|++.+|+...   .+..+.+.. ......++..|+++++.+.+.+.+
T Consensus         1 g~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~---~~~~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~~   76 (274)
T d2pd4a1           1 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL---EKRVRPIAQ-ELNSPYVYELDVSKEEHFKSLYNS   76 (274)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT---HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHh-hCCceeEeeecccchhhHHHHHHH
Confidence            456778999999887  69999999999999999999997421   112222221 123567889999999998887655


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      ....+|
T Consensus        77 ~~~~~g   82 (274)
T d2pd4a1          77 VKKDLG   82 (274)
T ss_dssp             HHHHTS
T ss_pred             HHHHcC
Confidence            444444

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=1.1e-09  Score=71.72  Aligned_cols=32  Identities=28%  Similarity=0.514  Sum_probs=28.9

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      |||||||||||++|+++|+++|+ +|+++++..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~   34 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK   34 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCC
Confidence            89999999999999999999995 799987544

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=1.8e-09  Score=71.70  Aligned_cols=74  Identities=19%  Similarity=0.174  Sum_probs=55.1

Q ss_pred             CCeE-EEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506            7 KPKK-LIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS   81 (91)
Q Consensus         7 ~~~i-lItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~   81 (91)
                      .|+| +||||++.||..++++|+++ |+.|++..|+.      ++.+ ....+.  ...+.++++|++|.+++++++...
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~   75 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV------TRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFL   75 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSH------HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCH------HHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHH
Confidence            4566 89999999999999999986 89999999974      2222 222232  246789999999999999876544


Q ss_pred             hhhhh
Q 037506           82 GRSLG   86 (91)
Q Consensus        82 ~~~~~   86 (91)
                      -+..|
T Consensus        76 ~~~~g   80 (275)
T d1wmaa1          76 RKEYG   80 (275)
T ss_dssp             HHHHS
T ss_pred             HHhcC
Confidence            44444

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.82  E-value=3.8e-09  Score=69.40  Aligned_cols=74  Identities=14%  Similarity=0.096  Sum_probs=53.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc--CCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIENLCDVGQVTSSQRMRSGRS   84 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~~~   84 (91)
                      +-++||||++.||+.++++|+++|++|.+.+++.     ++..+.+ ..+.  ...+.++.+|++|++.+++.+...-..
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS-----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA   76 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-----HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999998876643     2222211 2222  235778999999999999876544444


Q ss_pred             hh
Q 037506           85 LG   86 (91)
Q Consensus        85 ~~   86 (91)
                      .|
T Consensus        77 ~g   78 (244)
T d1edoa_          77 WG   78 (244)
T ss_dssp             SS
T ss_pred             cC
Confidence            44

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=4e-09  Score=69.91  Aligned_cols=76  Identities=17%  Similarity=0.201  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-h---hhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-K---EFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~---~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ...|+++|||||+.||.++++.|.++|++|++++|+.      ++.+.. .   ......+..+.+|+.+...+......
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~------~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   85 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK------ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ   85 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHH
Confidence            3457899999999999999999999999999999974      222221 1   12233467888999998888876655


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .....|
T Consensus        86 ~~~~~g   91 (269)
T d1xu9a_          86 AGKLMG   91 (269)
T ss_dssp             HHHHHT
T ss_pred             HHHHhC
Confidence            444444

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.5e-08  Score=65.39  Aligned_cols=68  Identities=10%  Similarity=-0.034  Sum_probs=53.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      +...|.++||||++.||+.+++.|+++|++|++.+|+.      ++.+.+.  +..+++....|+.+.+.++....
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~------~~l~~~~--~~~~~~~~~~d~~~~~~~~~~~~   70 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE------SKLQELE--KYPGIQTRVLDVTKKKQIDQFAN   70 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH------HHHGGGG--GSTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHH--hccCCceeeeecccccccccccc
Confidence            46778999999999999999999999999999999963      2332222  23578889999988877776543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.77  E-value=1.2e-08  Score=66.76  Aligned_cols=69  Identities=16%  Similarity=0.155  Sum_probs=50.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..++||||+|.||..++++|.++|+. |+++.|+....  .........+..  ..+.++.+|++|++.+.+.+
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~--~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~   81 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA--DGAGELVAELEALGARTTVAACDVTDRESVRELL   81 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS--TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCH--HHHHHHHHHHHhccccccccccccchHHHHHHhh
Confidence            47999999999999999999999985 77777753211  111122233322  35788999999999988865

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=4.2e-09  Score=69.30  Aligned_cols=70  Identities=14%  Similarity=0.097  Sum_probs=53.0

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHh---CCCcEEEEecCCCCCCCcchHHH-hhhh----cCCCeEEEEeeCCChhhh
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVS---SGHNTFVYARPVTQNSRPSKLEI-HKEF----QGIGVTIIENLCDVGQVT   74 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~~~~~-~~~l----~~~~v~~v~gDl~d~~~l   74 (91)
                      ..+..|.++||||++.||..++++|.+   +|++|++.+|+.      ++.+. ..++    ....+.++.+|++|++.+
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~------~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v   75 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE------SMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH------HHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCH------HHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            345667789999999999999999975   799999999974      22222 1222    123578899999999999


Q ss_pred             hHHH
Q 037506           75 SSQR   78 (91)
Q Consensus        75 ~~~~   78 (91)
                      ++.+
T Consensus        76 ~~l~   79 (259)
T d1oaaa_          76 QRLL   79 (259)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.74  E-value=2.2e-08  Score=65.25  Aligned_cols=79  Identities=10%  Similarity=0.008  Sum_probs=56.1

Q ss_pred             CCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            3 GKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         3 ~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |....|+++||||++  .||.++++.|+++|++|++.+|+....   +....... .......+..|+.+...+...+.+
T Consensus         1 g~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   76 (258)
T d1qsga_           1 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK---GRVEEFAA-QLGSDIVLQCDVAEDASIDTMFAE   76 (258)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH---HHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHHh-hcCCcceeecccchHHHHHHHHHH
Confidence            567789999999998  699999999999999999999974211   11111111 123567788899998887776655


Q ss_pred             hhhhh
Q 037506           81 SGRSL   85 (91)
Q Consensus        81 ~~~~~   85 (91)
                      .....
T Consensus        77 ~~~~~   81 (258)
T d1qsga_          77 LGKVW   81 (258)
T ss_dssp             HHTTC
T ss_pred             hhhcc
Confidence            44333

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.74  E-value=7.2e-09  Score=67.90  Aligned_cols=71  Identities=15%  Similarity=0.092  Sum_probs=52.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCc-------EEEEecCCCCCCCcchHH-HhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHN-------TFVYARPVTQNSRPSKLE-IHKEFQG--IGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~-------V~~~~R~~~~~~~~~~~~-~~~~l~~--~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      |+||||++.||+++++.|.++|++       |...+|+.      ++.+ ...++..  ..+.++.+|++|++.+++.+.
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~------~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~   77 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA------ADLEKISLECRAEGALTDTITADISDMADVRRLTT   77 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH------HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            789999999999999999999987       77788863      2222 2222332  346788999999999998765


Q ss_pred             hhhhhhh
Q 037506           80 RSGRSLG   86 (91)
Q Consensus        80 ~~~~~~~   86 (91)
                      ..-..+|
T Consensus        78 ~~~~~~g   84 (240)
T d2bd0a1          78 HIVERYG   84 (240)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHcC
Confidence            5444444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.71  E-value=1.6e-08  Score=65.80  Aligned_cols=55  Identities=11%  Similarity=0.100  Sum_probs=44.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      +..|+++||||++.||+.+++.|.++|++|.+.+|+.      +.      ++..+.+++.+|+++.
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~------~~------l~~~~~~~~~~Dv~~~   56 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE------EL------LKRSGHRYVVCDLRKD   56 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH------HH------HHHTCSEEEECCTTTC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HH------HHhcCCcEEEcchHHH
Confidence            4568999999999999999999999999999999963      22      2223567888999763

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.68  E-value=4.1e-08  Score=63.05  Aligned_cols=56  Identities=16%  Similarity=0.130  Sum_probs=45.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      |+++||||++.||+++++.|.++|++|.+.+|+....               ....+++|+.+........
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~---------------~~~~~~~d~~~~~~~~~~~   57 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE---------------DLIYVEGDVTREEDVRRAV   57 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS---------------SSEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc---------------cceEeeccccchhhhHHHH
Confidence            6899999999999999999999999999999975221               3456778888776666543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1e-07  Score=61.90  Aligned_cols=69  Identities=13%  Similarity=0.071  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ..|.++||||++.||..++++|.++|++|++.+|+...     ......++. .....+..|+.+...++.....
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~   72 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG-----GEAQAKKLG-NNCVFAPADVTSEKDVQTALAL   72 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSS-----HHHHHHHHC-TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHhC-CCcccccccccccccccccccc
Confidence            34778999999999999999999999999999997532     122223332 3678888999998877766533

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.66  E-value=3.9e-08  Score=58.57  Aligned_cols=63  Identities=16%  Similarity=0.174  Sum_probs=50.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      |+++|+|+ |.+|+++++.|.+.|++|++++.++      ++.   ..+...+..++.+|.++++.+.++-..
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~------~~~---~~~~~~~~~~~~gd~~~~~~l~~a~i~   63 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE------EKV---NAYASYATHAVIANATEENELLSLGIR   63 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH------HHH---HHTTTTCSEEEECCTTCTTHHHHHTGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcH------HHH---HHHHHhCCcceeeecccchhhhccCCc
Confidence            46889988 9999999999999999999999863      333   333445678899999999998887444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.60  E-value=1.4e-07  Score=57.50  Aligned_cols=35  Identities=20%  Similarity=0.379  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.++|+|+|| |++|+++++.|.++||+|++++|+.
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~   35 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTL   35 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCh
Confidence            4689999988 9999999999999999999999974

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.58  E-value=1e-07  Score=61.82  Aligned_cols=35  Identities=23%  Similarity=0.256  Sum_probs=32.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .|+|+||||++.||+.+++.|.++|++|.+++|..
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~   36 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE   36 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            47899999999999999999999999999998864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=5.2e-08  Score=65.08  Aligned_cols=74  Identities=14%  Similarity=0.132  Sum_probs=48.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +|-|+||||++.||+++++.|.++|.+|+.+.+.........+. +....+.  ...+..+.+|++|++.+.+.+.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~   78 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER   78 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhh
Confidence            44568999999999999999999998766554322111001111 1112222  23688999999999999887643

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.57  E-value=1.3e-07  Score=63.76  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS---RPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ...|.++||||++.||+.+++.|.++|++|.+.+|+.....   ..+..+ ...++.. ....+.+|+.|.+.+++.+..
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-RGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-TTCEEEEECCCGGGHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-cccccccccchHHHHHHHHHH
Confidence            34678999999999999999999999999999988653210   111121 1222222 335567899998887776543


Q ss_pred             hhhhhh
Q 037506           81 SGRSLG   86 (91)
Q Consensus        81 ~~~~~~   86 (91)
                      .-...|
T Consensus        84 ~~~~~G   89 (302)
T d1gz6a_          84 ALDTFG   89 (302)
T ss_dssp             HHHHTS
T ss_pred             HHHHcC
Confidence            333333

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.54  E-value=5.6e-08  Score=59.42  Aligned_cols=34  Identities=32%  Similarity=0.451  Sum_probs=32.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||.|+||+|.+|+.+++.|.++||+|++.+|++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            6899999999999999999999999999999974

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.48  E-value=1.4e-07  Score=60.95  Aligned_cols=36  Identities=19%  Similarity=0.366  Sum_probs=33.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..||+||||++.||++++++|.++|++|++++|+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            357999999999999999999999999999999753

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=98.47  E-value=4.1e-07  Score=55.27  Aligned_cols=67  Identities=13%  Similarity=0.125  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-HHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSK-LEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      +.+|+|+|. |-+|.++++.|.+.|++|++++.++      ++ ..........++.++.||.+|++.+.++-..
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~------~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~   70 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP------EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID   70 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC------HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccc------hhHHHHHHHhhcCCcEEEEccCcchHHHHHhccc
Confidence            347899999 9999999999999999999999764      22 1222334455899999999999999887544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.41  E-value=2.1e-07  Score=60.98  Aligned_cols=35  Identities=17%  Similarity=0.247  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++-++||||++.||+++++.|.++|++|.+.+|+.
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~   36 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   36 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            34568999999999999999999999999988764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.39  E-value=2.5e-07  Score=59.88  Aligned_cols=35  Identities=17%  Similarity=0.059  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ||.|+||||++.||++++++|.++|++|.+++|+.
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            46789999999999999999999999999999875

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.32  E-value=5.2e-07  Score=54.66  Aligned_cols=37  Identities=27%  Similarity=0.322  Sum_probs=34.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+++|.|+||.|.+|+++++.|.++||+|++++|+.
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            3457999999999999999999999999999999975

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.30  E-value=3.2e-08  Score=64.95  Aligned_cols=69  Identities=10%  Similarity=-0.008  Sum_probs=49.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhhh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLG   86 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~~   86 (91)
                      ..+||||++.||+.+++.|.++|++|.+.+|+..      +.+.+...   ...++.+|+.|++++++.+...-..+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~------~~~~~~~~---~~~~~~~dv~~~~~~~~~~~~~~~~~G   70 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK------QKDELEAF---AETYPQLKPMSEQEPAELIEAVTSAYG   70 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG------SHHHHHHH---HHHCTTSEECCCCSHHHHHHHHHHHHS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHhh---hCcEEEeccCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999998642      12222221   123456888888888776544444444

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.30  E-value=5.4e-07  Score=58.40  Aligned_cols=63  Identities=13%  Similarity=0.165  Sum_probs=42.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-HHHhhhhcCCCeEEEEeeCCChh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSK-LEIHKEFQGIGVTIIENLCDVGQ   72 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~l~~~~v~~v~gDl~d~~   72 (91)
                      +..+||||++.||.++++.|+++|++|++.+|+....  .++ ...+..........++.|..+..
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA--AQRLVAELNAARAGSAVLCKGDLSLSS   65 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHHHHHHHHHSTTCEEEEECCCSSST
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHHHhhcCCceEEEecccccch
Confidence            3569999999999999999999999999999974211  000 11112222335666776665543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=1.7e-06  Score=52.30  Aligned_cols=34  Identities=26%  Similarity=0.361  Sum_probs=32.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |||+|+|+ |.+|+.++..|.+.||+|++++|...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            79999999 99999999999999999999999764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.99  E-value=5.6e-06  Score=54.35  Aligned_cols=40  Identities=15%  Similarity=0.086  Sum_probs=34.5

Q ss_pred             CCCCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecC
Q 037506            1 MEGKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      |.-.+..|+++||||+|  .||..+++.|.++|++|++.+|+
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~   43 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            33446778999999987  79999999999999999998875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.94  E-value=6.8e-06  Score=50.08  Aligned_cols=33  Identities=21%  Similarity=0.214  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||.|+|. |.+|+.+++.|.+.||+|++++|+.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCc
Confidence            68999988 9999999999999999999999864

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.89  E-value=4.1e-06  Score=49.37  Aligned_cols=61  Identities=13%  Similarity=0.068  Sum_probs=46.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR   80 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~   80 (91)
                      ++|+|+|. |-+|..+++.|  ++++|.+++.++      +...   .+...++.++.||.+|++.+.++-..
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~------~~~~---~~~~~~~~~i~Gd~~~~~~L~~a~i~   61 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDE------NVRK---KVLRSGANFVHGDPTRVSDLEKANVR   61 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCT------THHH---HHHHTTCEEEESCTTSHHHHHHTTCT
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcch------HHHH---HHHhcCccccccccCCHHHHHHhhhh
Confidence            46889987 88999999998  467888888764      2222   22345889999999999998886443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.87  E-value=5.8e-05  Score=43.82  Aligned_cols=60  Identities=15%  Similarity=0.140  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      ..||.|.|| |.+|+-++....+.|+++++++.+...   |.     ..   ..-+++.+|+.|.+.+.+..
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~---PA-----~~---va~~~i~~~~~d~~~l~~~~   70 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADA---PA-----MH---VAHRSHVINMLDGDALRRVV   70 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTC---GG-----GG---GSSEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCC---ch-----hh---cCCeEEECCCCCHHHHHHHH
Confidence            458999998 999999999999999999999986532   21     11   12377889999999888754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1.3e-05  Score=50.46  Aligned_cols=37  Identities=19%  Similarity=0.409  Sum_probs=34.5

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ||.-++|.|+|+ |.+|+.++..+...||+|++++++.
T Consensus         1 ~~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (192)
T d1f0ya2           1 KIIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE   37 (192)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence            577889999999 9999999999999999999999874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=3.4e-05  Score=42.21  Aligned_cols=36  Identities=14%  Similarity=0.141  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...+|+|+||+|-+|...++.+...|++|+++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~   66 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCH
Confidence            346899999999999999999899999999999863

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.78  E-value=1.9e-05  Score=48.19  Aligned_cols=34  Identities=12%  Similarity=0.160  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|+.++..|.++||+|++++|++
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~   34 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA   34 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            478999999 9999999999999999999999963

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=3.4e-05  Score=46.86  Aligned_cols=35  Identities=11%  Similarity=0.225  Sum_probs=27.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-C---cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-H---NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~---~V~~~~R~~   41 (91)
                      |++|.|.||||++|+.+++.|+++. |   +++.+.++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            4689999999999999999888763 3   455565543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=97.72  E-value=3.7e-05  Score=48.19  Aligned_cols=35  Identities=17%  Similarity=0.367  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.++|+|+|| |..|...+..|.++|++|+++.|..
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4568999999 9999999999999999999999864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.71  E-value=9.2e-05  Score=43.26  Aligned_cols=35  Identities=20%  Similarity=0.280  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+++++|+|| |+||.-++..|.+.|.+|+++.|+.
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            4568999999 9999999999999999999999863

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.69  E-value=4.1e-05  Score=44.20  Aligned_cols=37  Identities=19%  Similarity=0.344  Sum_probs=33.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...++++|+|| |++|.-++..|.+.|.+|+++.|...
T Consensus        20 ~~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            34579999999 99999999999999999999998764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.62  E-value=8.2e-05  Score=43.45  Aligned_cols=37  Identities=22%  Similarity=0.204  Sum_probs=33.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      .+++++|+|| |+||.-++..|.+.|.+|+++.|.+..
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            4579999999 999999999999999999999986643

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.61  E-value=3.6e-05  Score=48.49  Aligned_cols=32  Identities=25%  Similarity=0.368  Sum_probs=29.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      |||.|+|. ||+|..++..|.+.||+|++++.+
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n   32 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVS   32 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCC
Confidence            68999977 999999999999999999999975

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.60  E-value=2.9e-05  Score=46.94  Aligned_cols=34  Identities=18%  Similarity=0.215  Sum_probs=27.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEec
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYAR   39 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~R   39 (91)
                      ++++|.|.|||||+|+-+++.|.+++|   ++..+..
T Consensus         1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            357999999999999999999876554   6666543

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.60  E-value=3.3e-05  Score=47.95  Aligned_cols=32  Identities=22%  Similarity=0.281  Sum_probs=27.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEe
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYA   38 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~   38 (91)
                      |+||.|.|||||+|.-|++.|..+ ..++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            579999999999999999999987 46766553

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.55  E-value=0.00028  Score=40.40  Aligned_cols=36  Identities=22%  Similarity=0.253  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .+.++|+|+|+ |.+|..-++.|++.|.+|++++...
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~   45 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTF   45 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            45689999999 9999999999999999999998654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.52  E-value=0.00012  Score=42.72  Aligned_cols=60  Identities=17%  Similarity=0.240  Sum_probs=41.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchHHH-hhhhcCCCeEEEEe
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS---RPSKLEI-HKEFQGIGVTIIEN   66 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~~~-~~~l~~~~v~~v~g   66 (91)
                      ..++|+|+|| ||+|.-++..|.+.|.+|+++.|......   +++-... ...+...+++++.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~l~~~~d~~~~~~~~~~l~~~gv~~~~~   92 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATG   92 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEES
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcccccccchhhHHHHHHHhhcCCeEEEeC
Confidence            3568999999 99999999999999999999988654321   1211121 12344556766643

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.52  E-value=9.1e-05  Score=42.63  Aligned_cols=37  Identities=22%  Similarity=0.268  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..+++++|+|| |++|.-++..|.+.|.+|+++.|.+.
T Consensus        19 ~~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          19 ALPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            34578999999 99999999999999999999998654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.52  E-value=6.3e-05  Score=45.76  Aligned_cols=34  Identities=18%  Similarity=0.154  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |++|.|+|- |.+|+.+++.|+++||+|++++|+.
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~   34 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQ   34 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECch
Confidence            468999977 9999999999999999999999874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.52  E-value=7.9e-05  Score=45.18  Aligned_cols=34  Identities=26%  Similarity=0.411  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      |++|+|+|. |.+|.++++.|.+.|+  +|++++|+.
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            457999986 9999999999999986  677777753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=97.49  E-value=0.00013  Score=42.57  Aligned_cols=59  Identities=17%  Similarity=0.254  Sum_probs=41.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchHHH-hhhhcCCCeEEEEe
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS---RPSKLEI-HKEFQGIGVTIIEN   66 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~~~-~~~l~~~~v~~v~g   66 (91)
                      .++++|+|| ||+|.-++..|.+.|.+|+++.|......   +++..+. ...+...+++++..
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~~l~~~GV~i~~~   92 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFE   92 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEES
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccccccCCHHHHHHHHHHHHHCCcEEEeC
Confidence            478999999 99999999999999999999998764321   1111111 23345567877643

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.48  E-value=0.00011  Score=44.66  Aligned_cols=24  Identities=17%  Similarity=0.279  Sum_probs=21.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG   31 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g   31 (91)
                      |||.|+|||||+|+.+++.|+++.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~   24 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEER   24 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTT
T ss_pred             CEEEEECCccHHHHHHHHHHHhcC
Confidence            689999999999999999998754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.48  E-value=4.8e-05  Score=47.75  Aligned_cols=36  Identities=17%  Similarity=0.227  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |.++||.|+|+ |.-|.+++..|.+.||+|+++.|+.
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~   40 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNE   40 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCH
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecH
Confidence            45568999999 9999999999999999999999863

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00013  Score=42.05  Aligned_cols=37  Identities=16%  Similarity=0.252  Sum_probs=33.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      -+++++|+|| |++|.-++..|.+.|.+|+++.|.+..
T Consensus        20 ~p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          20 LPERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence            3578999999 999999999999999999999987643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=97.47  E-value=0.00015  Score=42.01  Aligned_cols=35  Identities=23%  Similarity=0.440  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .++|+|+|| |++|.-++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            578999999 99999999999999999999998653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=97.47  E-value=0.00011  Score=46.35  Aligned_cols=36  Identities=22%  Similarity=0.268  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      +.+||+|+|| |..|..++..|.++|++|+++.|.+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            5679999999 99999999999999999999998653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.46  E-value=0.00031  Score=41.55  Aligned_cols=61  Identities=15%  Similarity=0.097  Sum_probs=42.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR   83 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~   83 (91)
                      |||.|.|++|..|+.+.+.+.+.++++.+.. ++..           ..+..  .+ +..|++.++.+.+.+ +.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------~~~~~--~D-VvIDFS~p~~~~~~l-~~~~   62 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------EELDS--PD-VVIDFSSPEALPKTV-DLCK   62 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------EECSC--CS-EEEECSCGGGHHHHH-HHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------HHhcc--CC-EEEEecCHHHHHHHH-HHHH
Confidence            6899999999999999999989999887653 3210           11222  22 457888888877764 4443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.45  E-value=8.6e-05  Score=45.03  Aligned_cols=33  Identities=30%  Similarity=0.291  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||.|+|- |.+|+.+++.|+++||+|++++|++
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~   33 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNP   33 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            68999988 9999999999999999999999874

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.44  E-value=8.5e-05  Score=45.53  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=30.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||-|+|- |.+|+.+++.|++.||+|++++|+.
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~   34 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTY   34 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCH
Confidence            68999988 9999999999999999999999864

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00019  Score=39.85  Aligned_cols=36  Identities=22%  Similarity=0.213  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|+|+|. |-.|.++++.|.++|++|++++....
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            5678999999 88999999999999999999997653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=97.41  E-value=0.00024  Score=41.13  Aligned_cols=37  Identities=19%  Similarity=0.145  Sum_probs=33.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...++++|+|| |+||.-++..|.+.|.+|+++.|...
T Consensus        20 ~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          20 NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            34578999999 99999999999999999999998654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.38  E-value=0.00014  Score=42.24  Aligned_cols=34  Identities=21%  Similarity=0.418  Sum_probs=31.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ++++|+|| ||+|.-++..|.+.|.+|+++.|...
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            57999999 99999999999999999999998654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.38  E-value=0.00013  Score=44.40  Aligned_cols=36  Identities=11%  Similarity=0.117  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~   42 (91)
                      ..+||+|+|| |..|...+..|.+.|+ +|+++.|...
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3579999999 9999999999999998 5999998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00029  Score=41.07  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++++|+|| |++|.-++..|.+.|.+|+++.|...
T Consensus        21 ~pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          21 LPGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            3578999999 99999999999999999999999754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=97.34  E-value=0.00014  Score=45.55  Aligned_cols=33  Identities=18%  Similarity=0.291  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+|| |.-|...+.+|.++|++|+++.+..
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999999 9999999999999999999998764

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.34  E-value=0.00017  Score=43.61  Aligned_cols=34  Identities=18%  Similarity=0.206  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |||.|+||+|.+|++++..|..++  .++.+++++.
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            689999999999999999999888  5899998763

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.34  E-value=0.00016  Score=43.38  Aligned_cols=33  Identities=12%  Similarity=0.034  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||.|+|. |.+|+.+++.|+++||+|++.+|..
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~   33 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGR   33 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCch
Confidence            68999977 9999999999999999999988764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.32  E-value=0.00017  Score=43.69  Aligned_cols=24  Identities=29%  Similarity=0.362  Sum_probs=21.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGH   32 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~   32 (91)
                      +|.|+|||||+|..|++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999998888765

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.32  E-value=0.00012  Score=45.63  Aligned_cols=34  Identities=18%  Similarity=0.254  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -++|.|+|+ |.+|+.++..++..|++|++++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            468999999 9999999999999999999999864

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00064  Score=41.26  Aligned_cols=34  Identities=18%  Similarity=0.204  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..+|+|+||+|.+|...++.+...|.+|++++++
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~   62 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGT   62 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEEeccccccccccccccccCccccccccc
Confidence            4589999999999999999999999999999975

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=97.31  E-value=0.00023  Score=41.98  Aligned_cols=36  Identities=14%  Similarity=0.406  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      .++++|+|| ||+|.-++..|.+.|.+|+++.+....
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            578999999 999999999999999999999987643

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.29  E-value=0.00017  Score=44.92  Aligned_cols=32  Identities=22%  Similarity=0.247  Sum_probs=26.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEe
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYA   38 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~   38 (91)
                      |+||.|.|||||+|.-+++.|.++- .++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            5689999999999999999998865 4665554

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.28  E-value=0.00017  Score=43.45  Aligned_cols=33  Identities=18%  Similarity=0.246  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||.|+|+ |-+|+++++.|++.++++++..|+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~   33 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSL   33 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChH
Confidence            68999988 9999999999999999999999863

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=97.27  E-value=0.0002  Score=44.61  Aligned_cols=33  Identities=18%  Similarity=0.180  Sum_probs=30.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||+|+|| |.-|...+.+|.+.|++|+++.+..
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78999999 9999999999999999999998754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.26  E-value=0.00016  Score=43.33  Aligned_cols=33  Identities=18%  Similarity=0.350  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      |+|.++|+ |-+|+++++.|++.+ ++|.+.+|+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~   34 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGA   34 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCCh
Confidence            68999988 999999999999887 9999999864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.26  E-value=0.00022  Score=43.76  Aligned_cols=34  Identities=15%  Similarity=0.302  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+|.|+|- |.+|+.+++.|++.||+|++++|++
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~   35 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTV   35 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSST
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            457999999 9999999999999999999999975

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.25  E-value=0.00025  Score=47.15  Aligned_cols=34  Identities=24%  Similarity=0.428  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +++|+|+|| |+-|...+..|.+.|++|+++.++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            578999999 9999999999999999999998765

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.24  E-value=0.00019  Score=44.66  Aligned_cols=33  Identities=18%  Similarity=0.341  Sum_probs=27.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEe
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYA   38 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~   38 (91)
                      .+.||.|.|||||+|+.|++.|.++- .++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            45689999999999999999999865 4666554

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=97.21  E-value=0.00027  Score=41.11  Aligned_cols=37  Identities=22%  Similarity=0.231  Sum_probs=33.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      -.++++|+|| |+||.-++..|.+.|.+|+++.|.+..
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            4578999999 999999999999999999999987643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=97.20  E-value=0.00025  Score=45.17  Aligned_cols=31  Identities=19%  Similarity=0.416  Sum_probs=29.4

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|| |.+|.+++.+|.++|++|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999999 9999999999999999999999864

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.18  E-value=0.0014  Score=38.98  Aligned_cols=66  Identities=14%  Similarity=0.037  Sum_probs=42.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHhC-CCcEEEEe-cCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhhh
Q 037506            9 KKLIFGGTGYLGKYMVKASVSS-GHNTFVYA-RPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLG   86 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~-R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~~   86 (91)
                      ||.|+|++|.+|+.+++.+.+. ++++.+.. +..     +.  .   .+...+.+ +..|++.|+.+.+.+ +.+...|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-----~~--~---~~~~~~~D-vvIDFS~p~~~~~~~-~~~~~~~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-----PL--S---LLTDGNTE-VVIDFTHPDVVMGNL-EFLIDNG   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-----CT--H---HHHTTTCS-EEEECCCTTTHHHHH-HHHHHTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-----ch--h---hhccccCC-EEEEcccHHHHHHHH-HHHHhcC
Confidence            6899999999999999988764 57766543 322     11  1   11111223 568899988887764 5444444

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=97.18  E-value=0.00024  Score=45.30  Aligned_cols=35  Identities=20%  Similarity=0.271  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|| |..|...+..|.++|++|+++.+..
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999999 9999999999999999999998754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00038  Score=43.28  Aligned_cols=36  Identities=17%  Similarity=0.291  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|+|+|| |..|...+..|.++||+|+++.+.+.
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            4579999999 99999999999999999999998753

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00059  Score=41.38  Aligned_cols=35  Identities=11%  Similarity=0.087  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|+||+|.+|...++.+...|.+|++++++.
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~   63 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA   63 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccch
Confidence            46899999999999999999999999999999863

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=97.16  E-value=0.00043  Score=40.53  Aligned_cols=36  Identities=28%  Similarity=0.228  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++++|+|| |+||.-++..|.+.|.+|+++.|...
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            4578999999 99999999999999999999988653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.10  E-value=0.00027  Score=43.61  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      |+|.|+|+ |..|.+++..|.+.|++|++..|.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~   32 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTE   32 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEec
Confidence            78999999 999999999999999999999885

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.08  E-value=0.00066  Score=42.88  Aligned_cols=37  Identities=22%  Similarity=0.268  Sum_probs=33.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .+.++|+|+|| |+.|...+..|.++|++|+++.+...
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            45689999999 99999999999999999999987653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.02  E-value=0.00047  Score=41.13  Aligned_cols=35  Identities=17%  Similarity=0.275  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ...++|+|+|| |.+|..-++.|++.|-+|+++...
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46689999999 999999999999999999999753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.00089  Score=40.90  Aligned_cols=39  Identities=18%  Similarity=0.169  Sum_probs=33.0

Q ss_pred             CCCCCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            2 EGKNTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         2 ~~~~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      +.++++.||.|+|+ |.+|++++..|...+  .++.+++++.
T Consensus        14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~   54 (159)
T d2ldxa1          14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADT   54 (159)
T ss_dssp             CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCH
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence            45677889999996 999999999999887  4888988763

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=97.00  E-value=0.00092  Score=38.20  Aligned_cols=36  Identities=14%  Similarity=0.122  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|+|+|| |++|.-++..|.+.|.+|+++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3578999999 99999999999999999999998653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=96.99  E-value=0.00058  Score=41.34  Aligned_cols=33  Identities=18%  Similarity=0.363  Sum_probs=29.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ++|+|+|| |.-|...+..|.++|+ +|+++.+..
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            47999999 9999999999999996 799998764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=96.97  E-value=0.00057  Score=40.42  Aligned_cols=34  Identities=18%  Similarity=0.151  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      .|||+|+|| |++|..++..|.+.+.  +|+++.+.+
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            479999999 9999999999998774  788887764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.97  E-value=0.00054  Score=42.36  Aligned_cols=32  Identities=19%  Similarity=0.166  Sum_probs=26.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |||.|+|. ||+|..++. +++.||+|++++-+.
T Consensus         1 MkI~ViGl-G~vGl~~a~-~~a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAGS-GYVGLSLGV-LLSLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEECC-SHHHHHHHH-HHTTTSEEEEECSCH
T ss_pred             CEEEEECC-ChhHHHHHH-HHHCCCcEEEEECCH
Confidence            68999975 999999886 447899999998653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00072  Score=42.41  Aligned_cols=35  Identities=20%  Similarity=0.202  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...||+|+|| |.-|...+..|.++|++|+++-...
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3468999999 9999999999999999999997643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.95  E-value=0.00048  Score=41.45  Aligned_cols=35  Identities=17%  Similarity=0.239  Sum_probs=30.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      .+|||.|+|+ |++|+.++..|+.++  .++.+++++.
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~   40 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK   40 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeeccc
Confidence            3579999996 999999999999877  6899999864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.94  E-value=0.00082  Score=40.27  Aligned_cols=35  Identities=17%  Similarity=0.126  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.++|+|+|| |++|..++..|.+.|.+|+++.+..
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            4678999999 9999999999999999888776543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=96.92  E-value=0.00084  Score=44.30  Aligned_cols=36  Identities=25%  Similarity=0.271  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~   42 (91)
                      ++|+|+|+|| |.-|...+..|++++  ++|+++.|...
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4678999999 999999999999876  69999998753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=96.91  E-value=0.00072  Score=43.69  Aligned_cols=33  Identities=27%  Similarity=0.497  Sum_probs=29.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ++|+|+|| |.+|.+++.+|.++|+ +|+++.|..
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            47999999 9999999999999996 699999864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.89  E-value=0.0008  Score=40.89  Aligned_cols=38  Identities=29%  Similarity=0.432  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      +..+.++|+|+|+ |-+|..+++.|.+.|. +++++.|..
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~   58 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY   58 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcH
Confidence            3467789999998 9999999999999997 688888863

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.89  E-value=0.00099  Score=40.20  Aligned_cols=31  Identities=10%  Similarity=0.158  Sum_probs=29.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|| |.-|...+..|.++|++|.++.+..
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            899998 9999999999999999999999865

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0012  Score=40.67  Aligned_cols=34  Identities=15%  Similarity=0.144  Sum_probs=31.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..|+|+||+|-+|...++.....|.+|++++|++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~   66 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecch
Confidence            3799999999999999999999999999999864

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.86  E-value=0.0011  Score=40.59  Aligned_cols=34  Identities=21%  Similarity=0.196  Sum_probs=31.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..|||+||+|-+|.+.++.....|.+|++++++.
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~   58 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR   58 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCH
Confidence            3699999999999999999889999999999975

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.85  E-value=0.00051  Score=41.46  Aligned_cols=25  Identities=12%  Similarity=0.215  Sum_probs=22.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG   31 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g   31 (91)
                      .+||.|+||+|++|++++-.|...+
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcc
Confidence            4599999999999999999888765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.83  E-value=0.0015  Score=39.51  Aligned_cols=34  Identities=24%  Similarity=0.264  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..+|+|+||+|.+|...++.+...|.+|++++++
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~   59 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS   59 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecc
Confidence            4689999999999999999999999999999975

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.82  E-value=0.0018  Score=39.50  Aligned_cols=35  Identities=14%  Similarity=0.102  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|+||+|-+|...++.....|.+|++++|+.
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~   64 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD   64 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCH
Confidence            46899999999999999999999999999999863

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.82  E-value=0.0011  Score=39.41  Aligned_cols=33  Identities=12%  Similarity=0.092  Sum_probs=29.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |||.|+|+ |.+|++++..|...+  .++.+++++.
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~   35 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVE   35 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEecccc
Confidence            68999997 999999999999887  6899998765

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.79  E-value=0.00011  Score=45.73  Aligned_cols=26  Identities=15%  Similarity=0.252  Sum_probs=23.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcE
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNT   34 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V   34 (91)
                      |||+|+|| |.+|.+.+.+|.++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            68999999 999999999999999754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.77  E-value=0.0016  Score=39.58  Aligned_cols=36  Identities=22%  Similarity=0.247  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...+|+|+||+|-+|...++.+...|.+|++++++.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~   62 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP   62 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccc
Confidence            346899999999999999999999999999999864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.77  E-value=0.0011  Score=39.75  Aligned_cols=32  Identities=19%  Similarity=0.256  Sum_probs=27.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP   40 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~   40 (91)
                      ||.|+||+|++|++++-.|..++  .++.+++.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~   35 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA   35 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecc
Confidence            79999999999999999888887  478888764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.75  E-value=0.00076  Score=43.23  Aligned_cols=32  Identities=19%  Similarity=0.296  Sum_probs=30.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|+|| |..|..++..|.+.|++|+++.|.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            7999999 9999999999999999999999864

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.00083  Score=44.10  Aligned_cols=33  Identities=15%  Similarity=0.236  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..|+|+|| |+-|..+++.|.+.|++|.++.++.
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            46899999 9999999999999999999998764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=96.72  E-value=0.0011  Score=42.29  Aligned_cols=31  Identities=16%  Similarity=0.184  Sum_probs=29.0

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|| |..|..++.+|.++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899999 9999999999999999999999853

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.0012  Score=39.68  Aligned_cols=33  Identities=18%  Similarity=0.280  Sum_probs=27.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHh-C--CCcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVS-S--GHNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~-~--g~~V~~~~R~   40 (91)
                      |||.|+|++|.+|++++-.|.. .  ..++..++..
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~   36 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA   36 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSS
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccc
Confidence            6899999999999999887753 3  3788888864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.63  E-value=0.0012  Score=39.23  Aligned_cols=36  Identities=11%  Similarity=0.230  Sum_probs=29.1

Q ss_pred             CCeEEEE-cCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIF-GGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilIt-GatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .+.++|+ .+.||||..+++.|.+.|.+|+++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3455665 24499999999999999999999998753

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.62  E-value=0.0017  Score=40.01  Aligned_cols=35  Identities=20%  Similarity=0.218  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|||+||+|-+|...++.+...|.+|++.+++.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~   66 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA   66 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCch
Confidence            45799999999999999999989999999999875

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.62  E-value=0.0014  Score=40.19  Aligned_cols=33  Identities=15%  Similarity=0.127  Sum_probs=28.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~   41 (91)
                      |||+|+|| |++|..++..|.+.  +.+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999999 99999999999875  46888888754

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.59  E-value=0.0017  Score=38.96  Aligned_cols=35  Identities=17%  Similarity=0.359  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      ..+||.|+|+ |++|++++..|...+  .++.+++++.
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~   41 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANE   41 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecc
Confidence            4568999997 999999999999877  4788888764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.59  E-value=0.0021  Score=40.27  Aligned_cols=35  Identities=20%  Similarity=0.131  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~   42 (91)
                      .++|+|+|| |..|..++..|.+.| ++|+++.|.+.
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            368999999 999999999999999 58999988654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.55  E-value=0.0073  Score=36.01  Aligned_cols=34  Identities=26%  Similarity=0.295  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|+| +|.+|...++.+...|.+|++++++.
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~   60 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSP   60 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHH
Confidence            45899997 59999999999989999999999863

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0031  Score=40.24  Aligned_cols=39  Identities=21%  Similarity=0.310  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEc----------------CCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            4 KNTKPKKLIFG----------------GTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         4 ~~~~~~ilItG----------------atG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ++..++||||+                .||..|.+|++++..+|++|+++.-+.+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~   57 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS   57 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc
Confidence            35678899988                4899999999999999999999987543

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.48  E-value=0.0021  Score=38.03  Aligned_cols=32  Identities=22%  Similarity=0.161  Sum_probs=27.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ||+|+|| |++|..++..|. ++++|+++.|.+.
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~~   33 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEPV   33 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEecccc
Confidence            7999999 999999998874 5789999987543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.48  E-value=0.0022  Score=38.32  Aligned_cols=33  Identities=15%  Similarity=0.163  Sum_probs=28.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~   40 (91)
                      .||.|+||+|.+|++++-.+..++  .++.+++.+
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            379999999999999999999887  478888754

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.45  E-value=0.005  Score=36.96  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...+|+|+|+ |.+|...++.+...|.+|++++++.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~   61 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS   61 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccch
Confidence            3468999987 9999999988888899999999864

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.44  E-value=0.0027  Score=37.83  Aligned_cols=35  Identities=14%  Similarity=0.188  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~   42 (91)
                      ++||.|+|+ |.+|+.++-.++..+  .++.+++++..
T Consensus         1 r~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (142)
T d1y6ja1           1 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKE   37 (142)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCC
Confidence            358999997 999999999999887  48999998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.012  Score=35.84  Aligned_cols=70  Identities=9%  Similarity=0.004  Sum_probs=45.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHH-hhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEI-HKEFQ-GIGVTIIENLCDVGQVTSSQR   78 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~-~~~l~-~~~v~~v~gDl~d~~~l~~~~   78 (91)
                      .+.++|+|+|+ |..+++++..|.+.|. +++++.|+....   ++... ...+. .........++.+.+.+...+
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFF---DKALAFAQRVNENTDCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTH---HHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHH---HHHHHHHHHHHhhcCcceEeeecccccchhhhh
Confidence            35679999999 7899999999999885 788888875321   22111 11121 123445567777776666543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.38  E-value=0.00072  Score=40.74  Aligned_cols=26  Identities=12%  Similarity=0.190  Sum_probs=22.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG   31 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g   31 (91)
                      .++||.|+||+|.+|++++-.|+..+
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999887643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.35  E-value=0.0027  Score=42.15  Aligned_cols=34  Identities=18%  Similarity=0.076  Sum_probs=29.3

Q ss_pred             CCeEEEEc--CCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFG--GTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItG--atG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .+-.||||  ++..||..+++.|.++|.+|.+..|.
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~   37 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCc
Confidence            35679999  55689999999999999999988765

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.31  E-value=0.0024  Score=38.03  Aligned_cols=33  Identities=12%  Similarity=0.013  Sum_probs=28.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |||.|+|+ |.+|++++..|..++  .++.+++++.
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~   35 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAE   35 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEeccc
Confidence            68999997 999999999888776  5788888753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0032  Score=40.21  Aligned_cols=31  Identities=29%  Similarity=0.334  Sum_probs=28.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|| |.-|...+..|.++|++|+++.+..
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789999 9999999999999999999998754

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.28  E-value=0.003  Score=39.26  Aligned_cols=34  Identities=18%  Similarity=0.383  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~   42 (91)
                      +||+|+|| |.-|...+.+|.+.  +++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            68999999 99999999999864  789999998754

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.0029  Score=34.33  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|+|.|+|+ |.+|+-++....+-|+++.+++-+.
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            368999999 9999999999999999999999754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.0051  Score=37.20  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++|+|.|+ |..+++++..|.+.|.+|+++.|+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~   51 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV   51 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchH
Confidence            35679999999 7799999999999999999999864

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.24  E-value=0.0028  Score=37.96  Aligned_cols=33  Identities=18%  Similarity=0.226  Sum_probs=28.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      +||.|+|+ |++|+.++..|+.++  .++.+++++.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~   36 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANE   36 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            68999996 999999999999876  5888888753

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.20  E-value=0.0053  Score=36.90  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=28.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      .++||.|+|+ |.+|+.++..|...+ .++.+++.+.
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~   41 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVK   41 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecc
Confidence            4579999998 999999998777777 4788888654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=96.17  E-value=0.0066  Score=34.37  Aligned_cols=36  Identities=19%  Similarity=0.231  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHh---CCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVS---SGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~---~g~~V~~~~R~~~   42 (91)
                      .+++++|+|| |++|.-++..|.+   .|.+|+++.|.+.
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            4579999999 9999999876543   5789999998654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.14  E-value=0.0044  Score=38.16  Aligned_cols=22  Identities=14%  Similarity=0.232  Sum_probs=20.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHhC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSS   30 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~   30 (91)
                      ||.|+||+|.||.+++-.|...
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT
T ss_pred             EEEEECCCcHHHHHHHHHHHcC
Confidence            7999999999999999988864

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.12  E-value=0.0054  Score=37.09  Aligned_cols=35  Identities=34%  Similarity=0.488  Sum_probs=30.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ..++|+|+|+ |..+++++..|.+.|. +|+++.|+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccH
Confidence            4578999999 8899999999999995 789998864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.11  E-value=0.0071  Score=34.35  Aligned_cols=36  Identities=14%  Similarity=0.178  Sum_probs=28.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHH---hCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASV---SSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll---~~g~~V~~~~R~~~   42 (91)
                      ..++++|+|| |++|.-++..|.   ..+.+|+++.|...
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            3578999999 999999886555   45678999998654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=96.10  E-value=0.0046  Score=40.69  Aligned_cols=32  Identities=22%  Similarity=0.365  Sum_probs=29.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .|+|+|| |+-|...+..|.+.|.+|+++.+.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            6999999 9999999999999999999999864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.05  E-value=0.011  Score=32.59  Aligned_cols=35  Identities=14%  Similarity=0.025  Sum_probs=27.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .|||.++|-.|-==+.|++.|.++||.|++.++..
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~   35 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEE   35 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            36899988755333468899999999999999874

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.04  E-value=0.0022  Score=38.69  Aligned_cols=32  Identities=16%  Similarity=0.257  Sum_probs=26.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      +.+|+|+|| |++|..++..|.+.|+++.++.+
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            346999998 99999999999998877666544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.02  E-value=0.0065  Score=36.19  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=28.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      .||.|+|+ |++|++++..+..++  .++.+++++.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~   36 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAK   36 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence            58999997 999999999999887  4888888763

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.01  E-value=0.0043  Score=36.71  Aligned_cols=33  Identities=21%  Similarity=0.133  Sum_probs=28.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   41 (91)
                      |||.|+|+ |.+|++++..++.++  .++.+++++.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~   35 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDK   35 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeccc
Confidence            68999997 999999998888776  5888888763

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.98  E-value=0.027  Score=33.85  Aligned_cols=34  Identities=32%  Similarity=0.335  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ..+|+|+|+ |-+|...++.+...|. +|++++++.
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~   63 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP   63 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred             CCEEEEECC-Cccchhheeccccccccccccccccc
Confidence            468999997 8999999999999996 789998863

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.94  E-value=0.0044  Score=37.43  Aligned_cols=34  Identities=12%  Similarity=0.181  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~   40 (91)
                      +++|.|.|+||-||...++-+.+.  .++|.+++=.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            579999999999999988887664  4888888643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.92  E-value=0.019  Score=35.25  Aligned_cols=37  Identities=19%  Similarity=0.198  Sum_probs=32.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...++|.|+|. |.||+.+++.+..-|.+|++++|...
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            45678999999 99999999999999999999998654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.91  E-value=0.012  Score=34.97  Aligned_cols=34  Identities=21%  Similarity=0.059  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|.|+ |.+|...++.+...|.+|+++++++
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~   61 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDD   61 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchh
Confidence            458999886 9999999998888999999999863

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.90  E-value=0.011  Score=35.93  Aligned_cols=36  Identities=11%  Similarity=0.026  Sum_probs=30.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      ..++||.|+|+ |.+|+.++..|..++.  ++.+++++.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~   55 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLE   55 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence            34579999997 9999999999999884  888888753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.85  E-value=0.0055  Score=37.05  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=27.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R   39 (91)
                      |++|.|.|+||-||...++-+.+.  .++|.+++=
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            468999999999999988877764  478888874

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.82  E-value=0.0069  Score=35.87  Aligned_cols=34  Identities=15%  Similarity=0.218  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ++||.|+|+ |.+|++++-.|...+ .++.+++.+.
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~   35 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE   35 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeecc
Confidence            368999997 999999998888776 4788888754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=95.77  E-value=0.0071  Score=39.03  Aligned_cols=34  Identities=18%  Similarity=0.226  Sum_probs=29.2

Q ss_pred             eEEEEcCCchHHHHHHHHHH-----hCCCcEEEEecCCCC
Q 037506            9 KKLIFGGTGYLGKYMVKASV-----SSGHNTFVYARPVTQ   43 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll-----~~g~~V~~~~R~~~~   43 (91)
                      -|+|+|| |..|..++..|.     ++|++|+++.|.+..
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~   47 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK   47 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence            3899999 999999999985     579999999987643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.72  E-value=0.0091  Score=36.18  Aligned_cols=36  Identities=17%  Similarity=0.279  Sum_probs=30.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +...++|+|+|+ |..+++++..|.+.+ +|+++.|+.
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~   50 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV   50 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhh
Confidence            356789999999 779999999987766 899999964

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.65  E-value=0.024  Score=31.38  Aligned_cols=35  Identities=11%  Similarity=0.017  Sum_probs=28.2

Q ss_pred             CCCeEEEEcCCchHH-HHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLG-KYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG-~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|.++|-.| +| +.|++.|.++||+|++.++..
T Consensus         7 ~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~   42 (96)
T d1p3da1           7 RVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIAD   42 (96)
T ss_dssp             TCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCC
T ss_pred             hCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCC
Confidence            357898888744 55 668999999999999999864

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0081  Score=35.04  Aligned_cols=35  Identities=23%  Similarity=0.274  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHH----hCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASV----SSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll----~~g~~V~~~~R~~~   42 (91)
                      .++++|+|| ||+|.-++..|.    +.|.+|+++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            368999999 999999888875    35889999988654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.59  E-value=0.014  Score=34.90  Aligned_cols=34  Identities=21%  Similarity=0.365  Sum_probs=27.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ++||.|+|+ |.+|++++..|...+ .++.+++++.
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~   37 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK   37 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccC
Confidence            468999996 999999998777666 5788888764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=95.54  E-value=0.01  Score=36.85  Aligned_cols=32  Identities=19%  Similarity=0.376  Sum_probs=29.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -|+|+|| |..|...+..|.++|++|.++.+..
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3899999 9999999999999999999999865

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.47  E-value=0.013  Score=35.52  Aligned_cols=36  Identities=19%  Similarity=0.250  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++|+|.|+ |..+++++..|.+.+-+|+++.|+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~   51 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF   51 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchH
Confidence            45678999998 7789999999998888999999974

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.08  Score=31.33  Aligned_cols=33  Identities=21%  Similarity=0.278  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ..+|+|+|+ |.+|...+..+...|. +|++++++
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~   60 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS   60 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCC
Confidence            457999987 9999999999999997 78888876

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.37  E-value=0.019  Score=34.09  Aligned_cols=34  Identities=18%  Similarity=0.188  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ..+|+|+|++|-+|...+..+...|. +|++++++
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~   62 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR   62 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccc
Confidence            45899999999999999998888884 77777765

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=95.35  E-value=0.012  Score=38.72  Aligned_cols=31  Identities=16%  Similarity=0.210  Sum_probs=28.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      -|+|+|+ |+-|+.++.+|.++|++|.++-+-
T Consensus         4 ~VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            3788998 999999999999999999999874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.31  E-value=0.033  Score=33.05  Aligned_cols=34  Identities=21%  Similarity=0.256  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|.|+ |-+|...++.+...|.++++++++.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~   64 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSE   64 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccch
Confidence            468999986 8899999998888999999988764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.31  E-value=0.0058  Score=37.15  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=28.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEE-EecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFV-YARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~-~~R~   40 (91)
                      +++||.|.|++|.+|+.+++.+.+. +.++.+ ++|.
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~   39 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   39 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecc
Confidence            5679999999999999999999875 456554 4454

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.29  E-value=0.014  Score=34.22  Aligned_cols=42  Identities=21%  Similarity=0.214  Sum_probs=34.6

Q ss_pred             CCCCCCCCeEEEEcCCc----------hHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            1 MEGKNTKPKKLIFGGTG----------YLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         1 ~~~~~~~~~ilItGatG----------~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |......++|+|+|+..          |.+.+.+++|.+.||+++.+..++.
T Consensus         1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~   52 (127)
T d1a9xa3           1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPA   52 (127)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTT
T ss_pred             CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchH
Confidence            55566778999999833          8899999999999999988887653

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.17  E-value=0.0073  Score=37.15  Aligned_cols=34  Identities=9%  Similarity=-0.028  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~   41 (91)
                      +.+|+|+|+ |.-|.+.+.+|.++|       ++|+++.+.+
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            358999999 999999999999987       4799998865

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.10  E-value=0.071  Score=32.52  Aligned_cols=63  Identities=21%  Similarity=0.320  Sum_probs=44.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM   79 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~   79 (91)
                      ..+++|+|+ |-.|..-++.+...|-+|++++.+.      ++.+.++......++..   ..+.+.+.+++.
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~------~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~   94 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINV------ERLSYLETLFGSRVELL---YSNSAEIETAVA   94 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH------HHHHHHHHHHGGGSEEE---ECCHHHHHHHHH
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcH------HHHHHHHHhhcccceee---hhhhhhHHHhhc
Confidence            568999999 9999999999999999999999863      34433333322334433   455667777653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=94.94  E-value=0.015  Score=34.94  Aligned_cols=36  Identities=22%  Similarity=0.181  Sum_probs=27.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEe-cCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYA-RPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~-R~~   41 (91)
                      |++.||.|.|. |++|+..++.+.+. +.+++++. |+.
T Consensus         1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~   38 (170)
T d1f06a1           1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRA   38 (170)
T ss_dssp             CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSS
T ss_pred             CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccc
Confidence            56778999996 99999999999875 56777654 443

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=94.91  E-value=0.019  Score=36.76  Aligned_cols=32  Identities=16%  Similarity=0.261  Sum_probs=29.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -|+|+|+ |..|...+..|.++|.+|.++.+.+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            3899999 9999999999999999999998764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.81  E-value=0.035  Score=33.68  Aligned_cols=35  Identities=26%  Similarity=0.305  Sum_probs=29.7

Q ss_pred             CeEEE-EcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            8 PKKLI-FGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilI-tGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++| +||+|-+|...++.....|.+|++++|...
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~   65 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP   65 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCT
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccc
Confidence            45777 589999999999988889999999998753

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.71  E-value=0.052  Score=32.21  Aligned_cols=34  Identities=15%  Similarity=0.260  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      .++|+|+|| |.+|.-.+..+++.|. .|+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            468999999 9999999999999985 577887754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.69  E-value=0.029  Score=34.13  Aligned_cols=31  Identities=16%  Similarity=0.220  Sum_probs=28.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|| |+.|...+..+.+.|.+|.++.+..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789999 9999999999999999999998753

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=94.65  E-value=0.026  Score=35.94  Aligned_cols=32  Identities=13%  Similarity=0.174  Sum_probs=28.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHh-CCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVS-SGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~R~~   41 (91)
                      -|+|+|| |.-|...+..|.+ .|++|+++.+.+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            3899999 9999999999987 599999999864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.63  E-value=0.046  Score=33.79  Aligned_cols=37  Identities=19%  Similarity=0.223  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...+++.|+|. |.||+.+++.+..-|.+|.+.++...
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            34578999988 99999999999999999999998643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.60  E-value=0.043  Score=34.25  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ...++|.|.|- |-+|+++++.|.+.|.+|++.+.+
T Consensus        25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d   59 (201)
T d1c1da1          25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTD   59 (201)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecch
Confidence            45678999986 999999999999999999988764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.57  E-value=0.022  Score=36.02  Aligned_cols=35  Identities=26%  Similarity=0.210  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ...+|+|+|+ |-+|++++..|...|- ++++++.+.
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            3468999998 7899999999999994 777776543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.50  E-value=0.039  Score=34.16  Aligned_cols=36  Identities=17%  Similarity=0.232  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|.|+|. |.||+.+++.|..-|.+|.++++...
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            3478999998 99999999999999999999998653

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=94.43  E-value=0.031  Score=35.00  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=30.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .|+|+|| |.-|...+-.|.++|++|.++.+.+.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            5999999 99999999999999999999998753

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=94.39  E-value=0.027  Score=36.96  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=28.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      -++|+|+ |+-|..++.+|.++|++|.++-+-
T Consensus         9 dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            4788898 999999999999999999999873

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.29  E-value=0.053  Score=31.78  Aligned_cols=34  Identities=24%  Similarity=0.173  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+|+|.|+ |-+|...++.+...|.+|++++++.
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~   61 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD   61 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCH
Confidence            457899875 8899999999999999999998753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.22  E-value=0.027  Score=34.94  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..-+|+|+|| |-.|.+-++-....|-+|++++.+.
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~   62 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRA   62 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccH
Confidence            3458999999 9999999999999999999999874

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.19  E-value=0.046  Score=31.11  Aligned_cols=32  Identities=19%  Similarity=0.315  Sum_probs=28.1

Q ss_pred             CeEEEEcCC---chHHHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFGGT---GYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGat---G~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |+|.|+|+|   +..|..+++.|++.||+|+.+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP   36 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP   36 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcc
Confidence            679999987   67899999999999999888754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.14  E-value=0.044  Score=32.22  Aligned_cols=34  Identities=12%  Similarity=0.135  Sum_probs=29.7

Q ss_pred             CCeEEEEcCC---chHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGT---GYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGat---G~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      .++|.|+|+|   +..|..+++.|.+.||+|+.+...
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            4689999998   789999999999999998887643

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.11  E-value=0.023  Score=34.52  Aligned_cols=31  Identities=16%  Similarity=0.147  Sum_probs=26.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~   38 (91)
                      ..|+|+||+|-+|+..++.+...|.++++.+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~   62 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGI   62 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecc
Confidence            5799999999999999998888887655543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.08  E-value=0.052  Score=33.64  Aligned_cols=35  Identities=14%  Similarity=0.195  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|.|+|- |.||+.+++.|..-|.+|.++++..
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCccc
Confidence            4578999998 9999999999999999999998754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=94.07  E-value=0.022  Score=37.52  Aligned_cols=33  Identities=30%  Similarity=0.421  Sum_probs=24.8

Q ss_pred             CeEEEEcC------CchHH---HHHHHHHHhCCCcEEEEecC
Q 037506            8 PKKLIFGG------TGYLG---KYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGa------tG~iG---~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      |||++++.      +|.+|   ..|+++|.+.||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            68888663      35455   55789999999999999743

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=94.03  E-value=0.038  Score=35.25  Aligned_cols=32  Identities=16%  Similarity=0.303  Sum_probs=22.7

Q ss_pred             CeEEEEcC-C-chH--HHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFGG-T-GYL--GKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGa-t-G~i--G~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |||+|++| | |.+  ...|+++|.++||+|..+..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            57888664 4 332  33488999999999988764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.03  E-value=0.064  Score=35.44  Aligned_cols=35  Identities=11%  Similarity=0.013  Sum_probs=30.3

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      ....++|+|-|- |-+|+++++.|.+.|.+|++++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            345678999988 99999999999999999988764

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.02  E-value=0.06  Score=34.41  Aligned_cols=35  Identities=14%  Similarity=0.119  Sum_probs=30.4

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      ....++|+|-|- |-+|+++++.|.+.|.+|++++-
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            356689999986 99999999999999999988764

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=94.01  E-value=0.036  Score=35.83  Aligned_cols=30  Identities=20%  Similarity=0.336  Sum_probs=27.8

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ++|+|+ |.-|..++.+|.+.|++|.++-+-
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            789998 999999999999999999999864

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=93.87  E-value=0.025  Score=33.95  Aligned_cols=35  Identities=17%  Similarity=0.169  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|+|| |..|..-+..+.+.|.+|+++.|..
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            3457999999 9999998899999999999998653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.84  E-value=0.18  Score=29.91  Aligned_cols=31  Identities=16%  Similarity=0.276  Sum_probs=25.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~   38 (91)
                      ..+|+|+|+ |.+|...++.+...|.+++++.
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~   59 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAV   59 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEE
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeee
Confidence            457999987 9999999988888887665544

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=93.72  E-value=0.048  Score=35.17  Aligned_cols=32  Identities=16%  Similarity=0.268  Sum_probs=29.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -|+|+|+ |..|...+..|.++|.+|.++.+.+
T Consensus        25 DVvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             SEEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3899999 9999999999999999999998764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.67  E-value=0.06  Score=31.21  Aligned_cols=37  Identities=19%  Similarity=0.194  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCc----------hHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTG----------YLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG----------~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|+|+|+..          |.+.+.++.|.+.|++++.+..++.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPe   49 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPE   49 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTT
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChh
Confidence            467999999833          8899999999999999999887654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.60  E-value=0.075  Score=32.40  Aligned_cols=35  Identities=9%  Similarity=-0.004  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+++.|+|. |.||+.+++.|..-|.+|..++|..
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            4578899887 9999999999999999999999864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.60  E-value=0.1  Score=32.04  Aligned_cols=35  Identities=14%  Similarity=0.161  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+++.|+|. |.||+.+++.+..-|.+|..+++..
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   80 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHR   80 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccc
Confidence            3578999998 9999999999999999999998754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.58  E-value=0.095  Score=31.90  Aligned_cols=35  Identities=17%  Similarity=0.210  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..+++.|+|. |.||+.+++.+..-|.+|.+.+|..
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCC
Confidence            4567888887 9999999999999999999998764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.57  E-value=0.048  Score=33.02  Aligned_cols=31  Identities=23%  Similarity=0.243  Sum_probs=28.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            789999 9999999999999999999998754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.53  E-value=0.083  Score=32.19  Aligned_cols=36  Identities=22%  Similarity=0.203  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|.|+|- |.||+.+++.+..-|.+|...++...
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            4568999877 99999999999999999999997543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.50  E-value=0.094  Score=31.44  Aligned_cols=33  Identities=12%  Similarity=0.149  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ..+|+|+|+ |.+|...++.+...|. +|++++++
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~   61 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR   61 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcccccccccccch
Confidence            457999986 9999999998888885 78888875

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.46  E-value=0.053  Score=33.38  Aligned_cols=33  Identities=12%  Similarity=0.168  Sum_probs=26.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~   41 (91)
                      .+++|+|| |++|..++..|.+.++  +|+++++..
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            35788888 9999999999988775  588887643

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.45  E-value=0.046  Score=37.71  Aligned_cols=34  Identities=29%  Similarity=0.330  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ..||||+|+ |.+|+.+++.|...|. ++++++.+.
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            458999999 6699999999999995 788887654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.40  E-value=0.049  Score=32.01  Aligned_cols=31  Identities=23%  Similarity=0.198  Sum_probs=25.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ||.++|- |.+|+.+++.|++.|+.+ +..|..
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTF   32 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSST
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCH
Confidence            6889998 999999999999988865 566653

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.21  E-value=0.03  Score=33.79  Aligned_cols=34  Identities=9%  Similarity=0.125  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      .++|+|+|| |..|...+-.+.+.|.+|.++.+..
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            368999999 9999999999999999999998643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.92  E-value=0.12  Score=31.37  Aligned_cols=37  Identities=19%  Similarity=0.234  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++|+|+|.+..+|+.++..|.++|..|+......
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            4568999999999999999999999999998886543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.89  E-value=0.19  Score=30.07  Aligned_cols=34  Identities=18%  Similarity=0.210  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ...|+|+|+ |-+|...+..+...| .+|++++++.
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~   64 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNK   64 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcH
Confidence            457999987 999999999999998 5799999864

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=92.84  E-value=0.3  Score=28.70  Aligned_cols=34  Identities=15%  Similarity=0.158  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ..+|+|+|+ |.+|...+..+...| .+|++++++.
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~   63 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK   63 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH
Confidence            357999999 568999999999888 5777887764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=92.78  E-value=0.091  Score=30.80  Aligned_cols=30  Identities=27%  Similarity=0.231  Sum_probs=27.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      |+|+|| |..|...+-.+.+.|.+|.++.+.
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            789999 999999999999999999999874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.75  E-value=0.088  Score=33.98  Aligned_cols=35  Identities=11%  Similarity=0.005  Sum_probs=30.0

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      ....++|.|.|- |-+|+++++.|.+.|.+|++++-
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            355678999985 99999999999999999987753

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.51  E-value=0.17  Score=30.77  Aligned_cols=37  Identities=8%  Similarity=0.055  Sum_probs=32.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...++|+|+|.+..+|+.++..|.++|..|+......
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            4568899999999999999999999999999887654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.49  E-value=0.066  Score=35.12  Aligned_cols=28  Identities=18%  Similarity=0.258  Sum_probs=25.4

Q ss_pred             CCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506           15 GTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus        15 atG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .||..|.+++++++.+|++|+.+.+..+
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            5799999999999999999999988754

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=92.46  E-value=0.03  Score=32.26  Aligned_cols=33  Identities=18%  Similarity=0.073  Sum_probs=26.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHH-hCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASV-SSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll-~~g~~V~~~~R~   40 (91)
                      +.+|+|.|| |..|..+++++. +.+|++.++.-+
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDd   36 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDV   36 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEES
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeC
Confidence            348999999 999999998765 356888887654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.41  E-value=0.12  Score=31.18  Aligned_cols=31  Identities=26%  Similarity=0.304  Sum_probs=28.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|| |..|...+.++.+.|.+|.++.+..
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            789999 9999999999999999999999753

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=92.35  E-value=0.075  Score=34.29  Aligned_cols=32  Identities=22%  Similarity=0.323  Sum_probs=29.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -|+|+|+ |..|...+..+.++|.+|.++.+.+
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899999 9999999999999999999998754

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.34  E-value=0.31  Score=28.49  Aligned_cols=33  Identities=15%  Similarity=0.143  Sum_probs=25.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~   40 (91)
                      ..+|+|.|+ |.+|...++.+...|.. |++.+++
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~   62 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN   62 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEccc
Confidence            457999998 56899999998888865 5555554

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.32  E-value=0.17  Score=29.14  Aligned_cols=36  Identities=11%  Similarity=0.034  Sum_probs=29.7

Q ss_pred             CCCCeEEEEcCC---chHHHHHHHHHHhCC-CcEEEEecC
Q 037506            5 NTKPKKLIFGGT---GYLGKYMVKASVSSG-HNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGat---G~iG~~l~~~Ll~~g-~~V~~~~R~   40 (91)
                      .+.++|.|+|+|   +..|..+++.|.+.+ ++|+.+...
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~   45 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK   45 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccC
Confidence            567899999998   899999999988766 688877643

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=92.19  E-value=0.11  Score=33.29  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=28.3

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+ |.-|..-+-.+.++|.+|.++.+..
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            899998 9999999999999999999998753

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=92.14  E-value=0.21  Score=29.74  Aligned_cols=34  Identities=15%  Similarity=0.148  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   41 (91)
                      ..+|+|+|+ |.+|...+..+...|. +|++++++.
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~   62 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK   62 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH
Confidence            357999986 9999999999988885 677887753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.11  E-value=0.14  Score=30.97  Aligned_cols=35  Identities=17%  Similarity=0.130  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..|++.|+|= |.||+-+++.+...|.+|++...++
T Consensus        23 ~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          23 AGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCCEEEEecc-ccccHHHHHHHHhCCCeeEeeeccc
Confidence            4567888886 9999999999999999999999864

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.15  Score=30.63  Aligned_cols=31  Identities=23%  Similarity=0.277  Sum_probs=28.0

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            688988 9999999999999999999998753

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.97  E-value=0.098  Score=31.91  Aligned_cols=32  Identities=19%  Similarity=0.210  Sum_probs=26.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~   40 (91)
                      -||.|-| .|.||+.+++.+.++. .+|+++...
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            4799998 5999999999999865 687777643

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.89  E-value=0.14  Score=28.13  Aligned_cols=35  Identities=11%  Similarity=0.112  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ..++|+|.|+ |.-|.-++..|.+..-+++...|..
T Consensus        31 ~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          31 VGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             TTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            4689999999 8999999999998876766666654

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=91.88  E-value=0.12  Score=33.12  Aligned_cols=32  Identities=16%  Similarity=0.072  Sum_probs=23.1

Q ss_pred             CeEEE-EcCC-chHHH--HHHHHHHhCCCcEEEEec
Q 037506            8 PKKLI-FGGT-GYLGK--YMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilI-tGat-G~iG~--~l~~~Ll~~g~~V~~~~R   39 (91)
                      |||+| ++|| |.|=-  .|+++|.++||+|+.++.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            57777 5566 33322  378999999999999874

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.83  E-value=0.11  Score=31.63  Aligned_cols=32  Identities=25%  Similarity=0.221  Sum_probs=29.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ..++|+|| |..|...+..+.+.|.+|.++.+.
T Consensus         6 ~DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           6 TTLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             cCEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            35899998 999999999999999999999875

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.76  E-value=0.23  Score=31.46  Aligned_cols=35  Identities=17%  Similarity=0.071  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      ...++|+|-|- |-+|+++++.|.+.|.+|++.+.+
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~   71 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVN   71 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeeccc
Confidence            45678999888 999999999999999999988754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.58  E-value=0.12  Score=31.85  Aligned_cols=30  Identities=17%  Similarity=0.177  Sum_probs=25.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~   38 (91)
                      |||+++|. +-.|..+++.|++.|++|.++.
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vv   30 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIF   30 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEE
Confidence            68999976 5579999999999999997654

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.15  Score=31.51  Aligned_cols=30  Identities=17%  Similarity=0.169  Sum_probs=26.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~   38 (91)
                      |||+++|. ...|..+++.|++.+|+|.++.
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~   30 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVF   30 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEE
Confidence            68999977 6789999999999999998665

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.52  E-value=0.19  Score=30.10  Aligned_cols=32  Identities=16%  Similarity=0.225  Sum_probs=28.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      -++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         5 DviVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           5 ETLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            3789998 9999999999999999999998754

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=91.39  E-value=0.4  Score=28.54  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=27.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ..+|+|+|+ |.+|...+..+...|. +|++.+++
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~   62 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDIN   62 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccc
Confidence            358999986 9999999999999997 56666765

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.21  E-value=0.066  Score=31.25  Aligned_cols=27  Identities=22%  Similarity=0.188  Sum_probs=23.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCc
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHN   33 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~   33 (91)
                      ..++++|+|| |++|.-+++.+.+.|.+
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~   54 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQPGES   54 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCCSSC
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHcCCc
Confidence            3579999999 99999999999998854

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=91.16  E-value=0.15  Score=33.59  Aligned_cols=31  Identities=19%  Similarity=0.259  Sum_probs=27.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|+ |.-|+-++.+|.+.|++|.++-+-.
T Consensus         5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG~   35 (360)
T d1kdga1           5 YIIVGA-GPGGIIAADRLSEAGKKVLLLERGG   35 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEEccC
Confidence            678888 9999999999999999999998753

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.02  E-value=0.13  Score=30.63  Aligned_cols=34  Identities=21%  Similarity=0.207  Sum_probs=22.7

Q ss_pred             CCeEEEEcCCchHHHHHH-HHHHhCC-CcEEEEe-cCC
Q 037506            7 KPKKLIFGGTGYLGKYMV-KASVSSG-HNTFVYA-RPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~-~~Ll~~g-~~V~~~~-R~~   41 (91)
                      +.||.|+| +|.+|..+. +.|.... .+++++. |+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~   40 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDA   40 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCT
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecch
Confidence            45899999 799998654 5444333 4677764 543

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=91.01  E-value=0.25  Score=30.21  Aligned_cols=32  Identities=22%  Similarity=0.194  Sum_probs=26.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~   38 (91)
                      .+|||+++|. +..+..+++.|++.+++|.++.
T Consensus         2 ~~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vi   33 (206)
T d1fmta2           2 ESLRIIFAGT-PDFAARHLDALLSSGHNVVGVF   33 (206)
T ss_dssp             CCCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHhCCCCEEEEE
Confidence            4679999986 6788888999999999987654

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.98  E-value=0.19  Score=33.93  Aligned_cols=31  Identities=23%  Similarity=0.085  Sum_probs=23.4

Q ss_pred             CeEEEEcC-------CchHH---HHHHHHHHhCCCcEEEEe
Q 037506            8 PKKLIFGG-------TGYLG---KYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         8 ~~ilItGa-------tG~iG---~~l~~~Ll~~g~~V~~~~   38 (91)
                      |||+.+..       +|.+|   .+|+++|.++||+|++++
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            56776543       46666   457899999999999986

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.92  E-value=0.042  Score=31.93  Aligned_cols=31  Identities=13%  Similarity=0.308  Sum_probs=19.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |-++|. |.+|+++++.|.+.++.+.++.|+.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~   32 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSI   32 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSH
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCCh
Confidence            345666 9999999987755434345777753

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.81  E-value=0.23  Score=30.25  Aligned_cols=31  Identities=23%  Similarity=0.277  Sum_probs=28.4

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            789998 9999999999999999999998754

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=90.72  E-value=0.19  Score=31.97  Aligned_cols=32  Identities=16%  Similarity=0.120  Sum_probs=23.1

Q ss_pred             CeEEEEc-CC-chHH--HHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFG-GT-GYLG--KYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItG-at-G~iG--~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |||+|++ || |-+-  ..|+++|.++||+|+.++-
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            6788764 44 3332  3478999999999999984

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.29  E-value=0.47  Score=28.72  Aligned_cols=33  Identities=15%  Similarity=0.091  Sum_probs=26.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ..+|+|+|+ |-+|...+..+...|. +|++++++
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~   59 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN   59 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeeccc
Confidence            458999986 9999888888877775 67777765

>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.18  E-value=0.16  Score=32.54  Aligned_cols=34  Identities=15%  Similarity=0.192  Sum_probs=29.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHh--CCCcEEEEecCCC
Q 037506            8 PKKLIFGGTGYLGKYMVKASVS--SGHNTFVYARPVT   42 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~--~g~~V~~~~R~~~   42 (91)
                      ..|+|+|| |..|...+..|.+  .|++|+++.+...
T Consensus        51 ~~~~~~g~-g~~g~~~a~~~~~~~~~~~~~~~~~~~~   86 (311)
T d2gjca1          51 SDVIIVGA-GSSGLSAAYVIAKNRPDLKVCIIESSVA   86 (311)
T ss_dssp             ESEEEECC-SHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhCCCCeEEEEEcCCC
Confidence            35999999 9999999999985  4899999998653

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.18  E-value=0.27  Score=30.67  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=28.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus        45 vvVIGg-G~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          45 AIFIGG-GAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            899988 9999999999999999999999864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.88  E-value=0.34  Score=29.30  Aligned_cols=36  Identities=8%  Similarity=0.173  Sum_probs=31.2

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      ....++++|+|-|.-+|+.++..|.++|..|+....
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~   61 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDV   61 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecc
Confidence            355689999999999999999999999988887654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.88  E-value=0.22  Score=30.03  Aligned_cols=32  Identities=22%  Similarity=0.175  Sum_probs=25.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R   39 (91)
                      ++||.|-|- |.||+.+++.+.++. .++.++..
T Consensus         2 ~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd   34 (172)
T d2czca2           2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITK   34 (172)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred             cEEEEEECC-CHHHHHHHHHHHhCCCceEEEEec
Confidence            468999997 999999999998765 67766654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=89.79  E-value=0.31  Score=28.10  Aligned_cols=33  Identities=9%  Similarity=0.124  Sum_probs=28.2

Q ss_pred             CCeEEEEcCC---chHHHHHHHHHHhCCCcEEEEec
Q 037506            7 KPKKLIFGGT---GYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGat---G~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      .++|.|+|+|   +..|..+++.|.+.||++..+.-
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence            5689999988   56888999999999999887753

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.57  E-value=0.3  Score=32.58  Aligned_cols=33  Identities=12%  Similarity=0.136  Sum_probs=28.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHh------CCCcEEEEecCCC
Q 037506            9 KKLIFGGTGYLGKYMVKASVS------SGHNTFVYARPVT   42 (91)
Q Consensus         9 ~ilItGatG~iG~~l~~~Ll~------~g~~V~~~~R~~~   42 (91)
                      =|+|+|| |--|+..+..|.+      .|++|.++.|...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            3899999 9999999888876      8999999998754

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.48  E-value=0.32  Score=29.18  Aligned_cols=37  Identities=16%  Similarity=0.222  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ...|+|+|+|+ |.-|-.++..+.+.+.+++.+.|.+.
T Consensus        30 ~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          30 FSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHhhhccccccccccc
Confidence            45689999998 99999999999999988888887654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=89.37  E-value=1.2  Score=25.86  Aligned_cols=34  Identities=21%  Similarity=0.209  Sum_probs=25.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ..+|+|+|+ |-+|...+..+...+ .+|+++++..
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~   63 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP   63 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchH
Confidence            357999998 558887777777776 4677787753

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.28  E-value=0.16  Score=30.24  Aligned_cols=31  Identities=23%  Similarity=0.360  Sum_probs=24.4

Q ss_pred             CeEEEEcCCchHHHH-----HHHHHHhCCCcEEEEe
Q 037506            8 PKKLIFGGTGYLGKY-----MVKASVSSGHNTFVYA   38 (91)
Q Consensus         8 ~~ilItGatG~iG~~-----l~~~Ll~~g~~V~~~~   38 (91)
                      |+++|||-...+|..     |+..|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            678998874356665     7788889999999986

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.26  E-value=0.88  Score=27.78  Aligned_cols=35  Identities=11%  Similarity=0.323  Sum_probs=29.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHH--------------------hCC-CcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASV--------------------SSG-HNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll--------------------~~g-~~V~~~~R~~   41 (91)
                      ..++|+|+|+ |.++.-+++-|+                    +.+ .+|+++.|..
T Consensus        38 ~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg   93 (216)
T d1lqta1          38 SGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG   93 (216)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred             cCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence            3579999999 999999998887                    445 5799999864

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=89.22  E-value=0.87  Score=26.54  Aligned_cols=33  Identities=18%  Similarity=0.083  Sum_probs=25.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~   40 (91)
                      ...|+|.|+ |.+|...++.+...|. .|++.+++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~   66 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK   66 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch
Confidence            457899886 9999999888887775 56666664

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.16  E-value=0.3  Score=29.63  Aligned_cols=31  Identities=23%  Similarity=0.258  Sum_probs=28.3

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|| |..|...+-++.+.|.+|.++.+.+
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~~~   36 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDFVT   36 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECCCC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            789999 9999999999999999999998654

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.08  E-value=0.43  Score=25.94  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=24.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~   38 (91)
                      |||||+|..| =-.+++..|.++.++++++-
T Consensus         1 MkVLviGsGg-REHAia~~l~~s~~~v~~~p   30 (90)
T d1vkza2           1 VRVHILGSGG-REHAIGWAFAKQGYEVHFYP   30 (90)
T ss_dssp             CEEEEEECSH-HHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCH-HHHHHHHHHhcCCCeEEEec
Confidence            6999999955 45578899988888888874

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.82  E-value=0.27  Score=29.27  Aligned_cols=31  Identities=19%  Similarity=0.182  Sum_probs=28.2

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|| |.-|...+.++.+.|.+|.++.+..
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~~   36 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKYK   36 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence            789998 9999999999999999999998753

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=88.82  E-value=0.22  Score=32.22  Aligned_cols=31  Identities=16%  Similarity=0.254  Sum_probs=28.3

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      |+|+|+ |.-|..-+-.+.++|.+|+++.+.+
T Consensus        10 VlVVG~-G~AGl~AAl~aa~~G~~V~lleK~~   40 (330)
T d1neka2          10 AVVIGA-GGAGMRAALQISQSGQTCALLSKVF   40 (330)
T ss_dssp             CEEECC-SHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEeCCC
Confidence            799999 9999999999999999999998754

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.57  E-value=0.42  Score=29.69  Aligned_cols=31  Identities=13%  Similarity=0.254  Sum_probs=28.3

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ++|+|| |..|...+.++.+.|.+|.++.+..
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~~   34 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKSR   34 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecCC
Confidence            688999 9999999999999999999998753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.01  E-value=0.012  Score=36.73  Aligned_cols=35  Identities=11%  Similarity=0.167  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      .++++|+|| |++|..++..|.+.|.+|+++.|...
T Consensus       180 ~~~vvViGg-G~~g~e~A~~l~~~g~~Vtli~r~~~  214 (233)
T d1djqa3         180 EAPRLIADA-TFTGHRVAREIEEANPQIAIPYKRET  214 (233)
T ss_dssp             TSCCCHHHH-HHHHHHHHHTTTSSCTTSCCCCCCCC
T ss_pred             CCceeEecC-chHHHHHHHHHHhcCCceEEEEeccc
Confidence            357888887 99999999999999999999988653

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.91  E-value=1.3  Score=27.13  Aligned_cols=35  Identities=11%  Similarity=0.246  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhC--------------------C-CcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSS--------------------G-HNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~--------------------g-~~V~~~~R~~   41 (91)
                      +.++|+|+|+ |.++.-+++-|++.                    | .+|+++.|..
T Consensus        38 ~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg   93 (225)
T d1cjca1          38 SCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG   93 (225)
T ss_dssp             TSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred             cCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence            4578999999 99999999999873                    4 6899999875

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.90  E-value=0.25  Score=30.85  Aligned_cols=35  Identities=20%  Similarity=0.300  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCchHHHH-----HHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKY-----MVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~-----l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      |++|.|+| =|.+|..     |+..|.+.|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            46788997 5767766     56688889999999998753

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=87.80  E-value=0.4  Score=28.83  Aligned_cols=31  Identities=23%  Similarity=0.189  Sum_probs=26.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      +||.|=|= |.||+.+.+.|.+++.+|.++.-
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCCEEEEECC
Confidence            47888877 99999999999999998888764

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.68  E-value=0.58  Score=29.60  Aligned_cols=34  Identities=21%  Similarity=0.186  Sum_probs=27.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHh-CCCcEEEEec
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVS-SGHNTFVYAR   39 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~R   39 (91)
                      ...++|+|-|- |-+|+++++.|.+ .|..|+.+.-
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            34678999888 9999999999986 5888887764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=87.67  E-value=0.37  Score=29.04  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...|+++|+|= |.+|+-++++|...|-+|+++..++
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCc
Confidence            34578999998 9999999999999999999998864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.54  E-value=0.59  Score=29.43  Aligned_cols=34  Identities=15%  Similarity=0.211  Sum_probs=27.9

Q ss_pred             CCCCCeEEEEcCCchHHHHHHHHHHh-CCCcEEEEe
Q 037506            4 KNTKPKKLIFGGTGYLGKYMVKASVS-SGHNTFVYA   38 (91)
Q Consensus         4 ~~~~~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~~   38 (91)
                      ....++|.|-|- |-+|+++++.|.+ .|..|++++
T Consensus        28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEee
Confidence            345678999876 9999999999974 599888776

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=87.30  E-value=0.34  Score=29.38  Aligned_cols=33  Identities=18%  Similarity=0.340  Sum_probs=25.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +++++|.||.| .|+.+.+.+...+|++..+.-+
T Consensus         2 ~kkl~i~Gagg-~~~~v~di~~~~~~~~~~f~dd   34 (193)
T d3bswa1           2 TEKIYIYGASG-HGLVCEDVAKNMGYKECIFLDD   34 (193)
T ss_dssp             CSEEEEEC--C-HHHHHHHHHHHHTCCEEEECCC
T ss_pred             CCEEEEEcCCH-hHHHHHHHHHhCCCcEEEEEcC
Confidence            57899999955 6888889888889998887643

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=86.75  E-value=1  Score=27.25  Aligned_cols=56  Identities=11%  Similarity=0.033  Sum_probs=34.2

Q ss_pred             CCCeEEEEcC-CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            6 TKPKKLIFGG-TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         6 ~~~~ilItGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      ...+||=+|+ +|    .++..|.+.|++|++++-++      +.....+.....+++++.+|+.+.
T Consensus        20 ~~~~VLDiGcG~G----~~~~~l~~~g~~v~giD~s~------~~i~~a~~~~~~~~~~~~~~~~~~   76 (225)
T d2p7ia1          20 RPGNLLELGSFKG----DFTSRLQEHFNDITCVEASE------EAISHAQGRLKDGITYIHSRFEDA   76 (225)
T ss_dssp             CSSCEEEESCTTS----HHHHHHTTTCSCEEEEESCH------HHHHHHHHHSCSCEEEEESCGGGC
T ss_pred             CCCcEEEEeCCCc----HHHHHHHHcCCeEEEEeCcH------HHhhhhhccccccccccccccccc
Confidence            4567887774 44    33566777899999998653      222222222234678888877553

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=86.21  E-value=0.46  Score=28.50  Aligned_cols=32  Identities=19%  Similarity=0.190  Sum_probs=25.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEec
Q 037506            7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (91)
Q Consensus         7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R   39 (91)
                      |++|.|-| -|.||+.+++.+.+++ .+++++..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            46899987 4999999999998876 56666653

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=86.06  E-value=0.56  Score=29.83  Aligned_cols=32  Identities=22%  Similarity=0.164  Sum_probs=22.4

Q ss_pred             CeEEEE-cCCc-hH--HHHHHHHHHhCCCcEEEEec
Q 037506            8 PKKLIF-GGTG-YL--GKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         8 ~~ilIt-GatG-~i--G~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |||+++ +||+ -+  -..|++.|.++||+|+.++-
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            577765 4543 22  12477899999999999974

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.95  E-value=0.74  Score=27.98  Aligned_cols=59  Identities=7%  Similarity=-0.059  Sum_probs=33.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDV   70 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d   70 (91)
                      ..++||=+|+ | .|.. +..|.+.|++|++++-++.-.   +.+.........+++++.+|+.+
T Consensus        41 ~~~~iLDiGc-G-tG~~-~~~l~~~~~~v~gvD~s~~mi---~~a~~~~~~~~~~i~~~~~d~~~   99 (251)
T d1wzna1          41 EVRRVLDLAC-G-TGIP-TLELAERGYEVVGLDLHEEML---RVARRKAKERNLKIEFLQGDVLE   99 (251)
T ss_dssp             CCCEEEEETC-T-TCHH-HHHHHHTTCEEEEEESCHHHH---HHHHHHHHHTTCCCEEEESCGGG
T ss_pred             CCCEEEEeCC-C-CCcc-chhhcccceEEEEEeeccccc---cccccccccccccchheehhhhh
Confidence            4467998885 2 2433 455777899999998753110   11111111112357888888765

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.60  E-value=0.46  Score=28.12  Aligned_cols=30  Identities=10%  Similarity=0.004  Sum_probs=24.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHhC-CCcEEEEe
Q 037506            8 PKKLIFGGTGYLGKYMVKASVSS-GHNTFVYA   38 (91)
Q Consensus         8 ~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~   38 (91)
                      .||.|+|+ |.+|+..++.+... +.+|+++.
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~   32 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVA   32 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEE
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEE
Confidence            58999996 89999999988875 56877664

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.59  E-value=1.9  Score=24.13  Aligned_cols=36  Identities=11%  Similarity=0.072  Sum_probs=29.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|+|+|+ |--...-+..|.+-.-+|+++.|.+.
T Consensus        29 ~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~   64 (126)
T d1fl2a2          29 KGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPE   64 (126)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred             CCceEEEEeC-CHHHHHHHHhhhccCCceEEEecccc
Confidence            4578999999 77777767788877789999998754

>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glucose oxidase
species: Penicillium amagasakiense [TaxId: 63559]

Probab=85.58  E-value=0.61  Score=30.89  Aligned_cols=31  Identities=19%  Similarity=0.284  Sum_probs=27.2

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ++|+|+ |.-|+.++.+|.+.+ +.|.++-+-.
T Consensus        27 ~IIVGs-G~aG~vlA~rLae~~~~~VLlLEaG~   58 (391)
T d1gpea1          27 YIIAGG-GLTGLTVAAKLTENPKIKVLVIEKGF   58 (391)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            678888 999999999999988 7999998764

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=85.45  E-value=0.74  Score=26.31  Aligned_cols=36  Identities=19%  Similarity=0.242  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...||+|.|-||..|+.-+++.++-|-+|.+=+.+.
T Consensus         5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPg   40 (119)
T d2nu7a1           5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPG   40 (119)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred             CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccC
Confidence            345899999999999999999999998888766543

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.94  E-value=0.44  Score=28.69  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCchHHHH-----HHHHHHhCCCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKY-----MVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~-----l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +|.|.|+++-|.+|..     |+..|.+.|++|.+++-+.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3568899888877766     6677888899999998654

>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glucose oxidase
species: Aspergillus niger [TaxId: 5061]

Probab=84.77  E-value=0.61  Score=30.69  Aligned_cols=31  Identities=19%  Similarity=0.217  Sum_probs=26.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~   41 (91)
                      ++|+|+ |.-|+-++.+|.+.+ ++|.++-+-.
T Consensus        20 ~IIVGs-G~aG~vlA~rLse~~~~~VLvLEaG~   51 (385)
T d1cf3a1          20 YIIAGG-GLTGLTTAARLTENPNISVLVIESGS   51 (385)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSTTCCEEEEESSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCeEEEECCCC
Confidence            678888 999999999998876 8999998754

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=84.68  E-value=1.1  Score=28.17  Aligned_cols=37  Identities=27%  Similarity=0.264  Sum_probs=30.8

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecC
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARP   40 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~   40 (91)
                      .+....+|++.|| |--|..+++.+++.+ .+++.++|.
T Consensus        22 ~~l~d~riv~~GA-GsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          22 KKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             CCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             CChhhcEEEEECh-HHHHHHHHHHHHHhcccceEeecce
Confidence            3466779999998 999999999999877 578888875

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.65  E-value=0.73  Score=28.55  Aligned_cols=58  Identities=14%  Similarity=0.062  Sum_probs=33.1

Q ss_pred             CCeEEEEc-CCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhcCCCeEEEEeeCCC
Q 037506            7 KPKKLIFG-GTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQGIGVTIIENLCDV   70 (91)
Q Consensus         7 ~~~ilItG-atG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~~~~v~~v~gDl~d   70 (91)
                      ..+||.+| ||||.-.-+++ ++  |-+|+++.+...-.   +.+ ..+..+.-.++.++.+|..+
T Consensus        79 g~~VLeIGsGsGY~taila~-l~--g~~V~~ie~~~~l~---~~a~~~l~~~g~~nv~~~~gd~~~  138 (215)
T d1jg1a_          79 GMNILEVGTGSGWNAALISE-IV--KTDVYTIERIPELV---EFAKRNLERAGVKNVHVILGDGSK  138 (215)
T ss_dssp             TCCEEEECCTTSHHHHHHHH-HH--CSCEEEEESCHHHH---HHHHHHHHHTTCCSEEEEESCGGG
T ss_pred             cceEEEecCCCChhHHHHHH-hh--CceeEEEeccHHHH---HHHHHHHHHcCCceeEEEECcccc
Confidence            45788777 77888765554 44  35688888863211   111 11222233467777777654

>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: Probable aromatic acid decarboxylase Pad1
species: Escherichia coli O157:H7 [TaxId: 83334]

Probab=84.65  E-value=0.7  Score=27.93  Aligned_cols=28  Identities=25%  Similarity=0.247  Sum_probs=21.4

Q ss_pred             EEEcCCc-hHHHHHHHHHHhC-CCcEEEEe
Q 037506           11 LIFGGTG-YLGKYMVKASVSS-GHNTFVYA   38 (91)
Q Consensus        11 lItGatG-~iG~~l~~~Ll~~-g~~V~~~~   38 (91)
                      .|||++| +-+..+++.|.+. |++|.++.
T Consensus         6 gITGas~a~~a~~ll~~L~~~~g~~V~vv~   35 (186)
T d1sbza_           6 GMTGATGAPLGVALLQALREMPNVETHLVM   35 (186)
T ss_dssp             EECSSSCHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred             EEccHHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence            4789877 4477889999884 78988765

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=84.32  E-value=1.1  Score=25.17  Aligned_cols=36  Identities=14%  Similarity=0.086  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..++|+|.|+ |--.-.-+..|.+-.-+|+++.|...
T Consensus        26 ~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          26 RNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             TTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            4679999999 88888888888888889999998764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=84.01  E-value=0.72  Score=26.60  Aligned_cols=32  Identities=6%  Similarity=-0.152  Sum_probs=23.3

Q ss_pred             CCCeEEEEcC-CchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIFGG-TGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilItGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      ...+||..|+ +|.    .+..|.++|++|++++-+.
T Consensus        20 ~~~rvLd~GCG~G~----~a~~la~~G~~V~gvD~S~   52 (201)
T d1pjza_          20 PGARVLVPLCGKSQ----DMSWLSGQGYHVVGAELSE   52 (201)
T ss_dssp             TTCEEEETTTCCSH----HHHHHHHHCCEEEEEEECH
T ss_pred             CCCEEEEecCcCCH----HHHHHHHcCCceEeecccH
Confidence            3568999995 443    3456667799999999753

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.99  E-value=2.3  Score=23.97  Aligned_cols=37  Identities=14%  Similarity=0.155  Sum_probs=29.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ   43 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   43 (91)
                      ..+.|+|.|+ |--.-.-+..|.+-.-+|+++.|....
T Consensus        33 rgk~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~~   69 (130)
T d1vdca2          33 RNKPLAVIGG-GDSAMEEANFLTKYGSKVYIIHRRDAF   69 (130)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred             CCCEEEEEcC-chHHHHHHHHHhCCCCcEEEEEecccc
Confidence            5688999999 777777777787777899999987643

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.86  E-value=1.1  Score=26.56  Aligned_cols=34  Identities=18%  Similarity=0.087  Sum_probs=24.1

Q ss_pred             CCeEEEEcCCchHHHH--HHHHHHhC----CCcEEEEecCC
Q 037506            7 KPKKLIFGGTGYLGKY--MVKASVSS----GHNTFVYARPV   41 (91)
Q Consensus         7 ~~~ilItGatG~iG~~--l~~~Ll~~----g~~V~~~~R~~   41 (91)
                      +|||.|+|| |.+|..  ++..++..    +.++..++.+.
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~   41 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE   41 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCc
Confidence            579999998 888865  33444432    35899999864

>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]

Probab=83.48  E-value=0.27  Score=28.03  Aligned_cols=30  Identities=30%  Similarity=0.388  Sum_probs=19.9

Q ss_pred             CCCCeEEEEcCCchHHHH-HHHHHHhC-CCcEE
Q 037506            5 NTKPKKLIFGGTGYLGKY-MVKASVSS-GHNTF   35 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~-l~~~Ll~~-g~~V~   35 (91)
                      |..|+|+|+|..| .|.. +++.|.+. |++++
T Consensus         2 m~~~~I~i~G~pG-sGKTTia~~La~~l~~~~i   33 (173)
T d1rkba_           2 MLLPNILLTGTPG-VGKTTLGKELASKSGLKYI   33 (173)
T ss_dssp             CCCCCEEEECSTT-SSHHHHHHHHHHHHCCEEE
T ss_pred             CCCCEEEEECCCC-CCHHHHHHHHHHHHCCcEE
Confidence            5678999999877 5655 44555442 66654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=83.10  E-value=0.38  Score=29.55  Aligned_cols=60  Identities=15%  Similarity=-0.031  Sum_probs=33.8

Q ss_pred             CCCCeEEEEcC-CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506            5 NTKPKKLIFGG-TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG   71 (91)
Q Consensus         5 ~~~~~ilItGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~   71 (91)
                      ...++||=+|+ +|.    ++..|.+.|.+|++++.++.-.   +.+.........+++++.+|+.+.
T Consensus        36 ~~~~~vLDiGCG~G~----~~~~l~~~g~~v~GvD~S~~ml---~~A~~~~~~~~~~v~~~~~d~~~~   96 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN----LTENLCPKFKNTWAVDLSQEML---SEAENKFRSQGLKPRLACQDISNL   96 (246)
T ss_dssp             CCTTEEEEETCTTST----THHHHGGGSSEEEEECSCHHHH---HHHHHHHHHTTCCCEEECCCGGGC
T ss_pred             CCCCeEEEEeCcCCH----HHHHHHHhCCccEeeccchhhh---hhccccccccCccceeeccchhhh
Confidence            34568998885 443    4556778899999998753110   011110111123577777777653

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.93  E-value=0.76  Score=27.53  Aligned_cols=33  Identities=21%  Similarity=0.180  Sum_probs=26.3

Q ss_pred             CeEEEEcCCchHHHH-----HHHHHHhCCCcEEEEecC
Q 037506            8 PKKLIFGGTGYLGKY-----MVKASVSSGHNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG~iG~~-----l~~~Ll~~g~~V~~~~R~   40 (91)
                      +.|.|+++-|.+|..     |+..|.+.|++|.+++=+
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            357899988888876     666777899999999844

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.74  E-value=2.4  Score=23.24  Aligned_cols=35  Identities=6%  Similarity=0.068  Sum_probs=28.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506            5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R   39 (91)
                      |++.+|||.=-.-.+...+.+.|-+.||+|.....
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~   35 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFEN   35 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCC
Confidence            45668999998888888888888889999887654

>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Chloroperoxidase L
species: Streptomyces lividans [TaxId: 1916]

Probab=82.36  E-value=1.7  Score=25.59  Aligned_cols=36  Identities=8%  Similarity=-0.161  Sum_probs=25.7

Q ss_pred             CCCeEEEE---cCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506            6 TKPKKLIF---GGTGYLGKYMVKASVSSGHNTFVYARPV   41 (91)
Q Consensus         6 ~~~~ilIt---GatG~iG~~l~~~Ll~~g~~V~~~~R~~   41 (91)
                      +.+.|+++   |+++..-..+++.|.++||+|+++++..
T Consensus        20 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G   58 (275)
T d1a88a_          20 DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRG   58 (275)
T ss_dssp             TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred             CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccc
Confidence            33455544   3455555678999999999999998754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=82.10  E-value=1.3  Score=27.39  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCchHHHH-----HHHHHHhCCCcEEEEecCCC
Q 037506            7 KPKKLIFGGTGYLGKY-----MVKASVSSGHNTFVYARPVT   42 (91)
Q Consensus         7 ~~~ilItGatG~iG~~-----l~~~Ll~~g~~V~~~~R~~~   42 (91)
                      ..+|+|+.|=|.+|..     |+..|.++|++|.+++-++.
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4578888778888887     56788889999999998753

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=82.06  E-value=1.1  Score=26.45  Aligned_cols=33  Identities=15%  Similarity=0.031  Sum_probs=23.3

Q ss_pred             CCCCeEEEEcCCchHHHH-HHHHHHhCC--CcEEEEe
Q 037506            5 NTKPKKLIFGGTGYLGKY-MVKASVSSG--HNTFVYA   38 (91)
Q Consensus         5 ~~~~~ilItGatG~iG~~-l~~~Ll~~g--~~V~~~~   38 (91)
                      |.+.||.|+|. |.+|+. .+..+.+..  .+++++.
T Consensus         1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~   36 (181)
T d1zh8a1           1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVT   36 (181)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEE
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEE
Confidence            45668999996 999986 466666643  4677654

>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Adenylylsulfate reductase A subunit
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.67  E-value=1.2  Score=28.23  Aligned_cols=31  Identities=23%  Similarity=0.360  Sum_probs=24.5

Q ss_pred             EEEEcCCchHHHHHHHHHH----hCCCcEEEEecCC
Q 037506           10 KLIFGGTGYLGKYMVKASV----SSGHNTFVYARPV   41 (91)
Q Consensus        10 ilItGatG~iG~~l~~~Ll----~~g~~V~~~~R~~   41 (91)
                      |+|+|+ |.-|..-+-.+.    ++|.+|.++.+..
T Consensus        24 VlIIG~-G~AGl~AA~~aa~~~~~~G~~V~vieK~~   58 (356)
T d1jnra2          24 ILIIGG-GFSGCGAAYEAAYWAKLGGLKVTLVEKAA   58 (356)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred             EEEECC-CHHHHHHHHHHHHHHHhCcCEEEEEeCCC
Confidence            799999 999987665554    4789999998754

>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: RecA protein-like (ATPase-domain)
domain: Cancer-related NTPase, C1orf57
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.74  E-value=1.4  Score=24.81  Aligned_cols=33  Identities=18%  Similarity=0.070  Sum_probs=23.2

Q ss_pred             CeEEEEcCCc----hHHHHHHHHHHhCCCcEEEEecC
Q 037506            8 PKKLIFGGTG----YLGKYMVKASVSSGHNTFVYARP   40 (91)
Q Consensus         8 ~~ilItGatG----~iG~~l~~~Ll~~g~~V~~~~R~   40 (91)
                      +.|+|||..|    .+=..+++.|.+.+..|.++...
T Consensus         2 k~v~ItG~~GtGKTtl~~~i~~~l~~~~~~v~~~~~~   38 (189)
T d2i3ba1           2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTE   38 (189)
T ss_dssp             CCEEEESCCSSCHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred             cEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence            5799999766    33445677777788877766543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.64  E-value=1  Score=31.44  Aligned_cols=34  Identities=12%  Similarity=0.105  Sum_probs=28.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecC
Q 037506            6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARP   40 (91)
Q Consensus         6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~   40 (91)
                      ...+|+|+|+ |-+|+.+++.|...| ..+++++.+
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            3468999998 679999999999999 577887654

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.39  E-value=0.85  Score=26.62  Aligned_cols=27  Identities=15%  Similarity=0.165  Sum_probs=21.1

Q ss_pred             CCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 037506            3 GKNTKPKKLIFGGTGYLGKYMVKASVSS   30 (91)
Q Consensus         3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~   30 (91)
                      ..+.+.+|.|+|. |++|+..++.+.+.
T Consensus         3 ~~~~k~kv~iIG~-G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           3 TNSGKFGVVVVGV-GRAGSVRLRDLKDP   29 (172)
T ss_dssp             CCCCSEEEEEECC-SHHHHHHHHHHTSH
T ss_pred             CCCCCcEEEEEcC-CHHHHHHHHHHHhC
Confidence            3455678999997 99999988877653