Citrus Sinensis ID: 037676

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------
Protein Sequence
MGNKLVVETAEQAATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHVEPPQRQPTFGEITLEEFLVKAGVVQEPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFSATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQEDIQATEDGKKED
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccHcHHcHHHHHHHHHHccccccccccccccccccccHccHHHHHHHcccEcccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MGNKLVVETAEQAATltrqnsfsipiLLCKKTVEEVWSEIQkdqqpqrrchveppqrqptfgeiTLEEFLVKAgvvqepatkpcpqshsppihrsnndsnnnnntclgsaygmglgpsaCTMMAlgfsatqpsmgsnllvngyaaypiytaptelvgqlastdsnngddkeksQGMMleavgpkgnrkriidgphEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQEDIQatedgkked
Flexible Loop (DISEMBL)
MGNKLVVETAEqaatltrqnsfsipILLCKKTVEEVWSEIQkdqqpqrrchveppqrqptfgeITLEEFLVKAGVVQEPAtkpcpqshsppihrsnndsnnNNNTCLGSAYGMGLGPSACTMMALGFSATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEavgpkgnrkriidgphevvverrqrrmiknresaarsrarkqaYTVELELELTQLKAENDKLKEAVKElerkrvqediqatedgkked
Low Complexity Region (SEG)
MGNKLVVETAEQAATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHVEPPQRQPTFGEITLEEFLVKAGVVQEPATKPCPQSHSPPIHRsnndsnnnnnTCLGSAYGMGLGPSACTMMALGFSATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQEDIQATEDGKKED
Disordered region (IsUnstruct)
***************LTRQNSFSIPILLCKKTVEEVWSEI********************FGEITLEEFLVKAGVV*********************************AYGMGLGPSACTMMALGFSATQPSMGSNLLVNGYAAYPIYTAPTELVG**************************************************************************************************************
Disordered Region (DISOPRED)
***********************IPILLCKKTVEEVW*****************************************************************************************************************************************************************************************YTVELELELTQLKAEND****************************
Disordered Region (DISEMBL)
MGNKLVVETAEQAATLTRQNSFSIPILLCKKTVEEVW*******************RQPTFGEITLEEFLVKAGVVQEP*************HRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFSATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIK************QAYTVELELELTQLKAENDKLKEAVKELERKRVQ*************
Disordered Region (DISPRO)
**********************SIPILLCKKTVEEVWSEIQKDQ***************TFGEITLEEFLVKAGVVQEPAT**********************NTCLGSAYGMGLGPSACTMMALGFSATQPSMGSNLLVNGYAAYPIYTAP*E**********************************************************AARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQEDIQATED*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNKLVVETAEQAATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHVEPPQRQPTFGEITLEEFLVKAGVVQEPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFSATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATEDGKKED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	267	2.2.26 [Sep-21-2011]
Q9SJN0	442	Protein ABSCISIC ACID-INS	yes	no	0.898	0.542	0.390	3e-35
Q8RYD6	331	ABSCISIC ACID-INSENSITIVE	no	no	0.827	0.667	0.454	7e-34
Q6ZDF3	318	bZIP transcription factor	no	no	0.865	0.726	0.393	2e-27
Q9LES3	297	ABSCISIC ACID-INSENSITIVE	no	no	0.707	0.636	0.373	4e-23
Q9C5Q2	262	ABSCISIC ACID-INSENSITIVE	no	no	0.707	0.721	0.358	4e-22
Q9M7Q5	392	ABSCISIC ACID-INSENSITIVE	no	no	0.898	0.612	0.314	5e-22
Q9M7Q4	416	ABSCISIC ACID-INSENSITIVE	no	no	0.382	0.245	0.469	5e-15
Q84JK2	285	Protein FD OS=Arabidopsis	no	no	0.621	0.582	0.338	6e-13
Q9M7Q3	454	ABSCISIC ACID-INSENSITIVE	no	no	0.220	0.129	0.65	6e-13
Q9M7Q2	431	ABSCISIC ACID-INSENSITIVE	no	no	0.213	0.132	0.619	6e-13

>sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/284 (39%), Positives = 142/284 (50%), Gaps = 44/284 (15%)

Query: 14  ATLTRQNSFSIPILLCKKTVEEVWSEIQKDQ-----------------QPQRRCHVEPPQ 56
           ++L RQ S ++P  LC+KTV+EVWSEI +                   Q   +   E   
Sbjct: 138 SSLPRQGSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAA 197

Query: 57  RQPTFGEITLEEFLVKAGVVQE------------------PATKPCPQSHSPPIHRSNND 98
           RQPTFGE+TLE+FLVKAGVV+E                         Q     + +   D
Sbjct: 198 RQPTFGEMTLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQLYGVFQGTGD 257

Query: 99  SNNNNNTCLGSAYGMGLGPSACTMMALGFSATQ-PSMGSNLLVNGYAAYPIYTAPTELVG 157
                 +  G A G+G  PS       G    Q P + + +   G   +        +VG
Sbjct: 258 P-----SFPGQAMGVG-DPSGYAKRTGGGGYQQAPPVQAGVCYGGGVGFGAGGQQMGMVG 311

Query: 158 QLA--STDSNNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAAR 215
            L+  S+D       +   G     +G    RKR++DGP E VVERRQRRMIKNRESAAR
Sbjct: 312 PLSPVSSDGLGHGQVDNIGGQYGVDMGGLRGRKRVVDGPVEKVVERRQRRMIKNRESAAR 371

Query: 216 SRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQEDIQA 259
           SRARKQAYTVELE EL QLK EN +LK A+ ELERKR Q+  ++
Sbjct: 372 SRARKQAYTVELEAELNQLKEENAQLKHALAELERKRKQQYFES 415

Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans-activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8RYD6|AI5L1_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1

 Score =  144 bits (363), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/264 (45%), Positives = 148/264 (56%), Gaps = 43/264 (16%)

Query: 10  AEQAATLTRQNSFSIPILLCKKTVEEVWSEIQK--DQQP----QRRCHVEPPQRQPTFGE 63
            E+ A L RQ S S+P+ LCKKTV+EVW EIQ    Q P      +   E  +RQ T GE
Sbjct: 87  GEKPAVLPRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGE 146

Query: 64  ITLEEFLVKAGVVQEPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMM 123
           ITLE+FLVKAGVVQEP       S S              +      +G+GL    C   
Sbjct: 147 ITLEDFLVKAGVVQEPLKTTMRMSSS--------------DFGYNPEFGVGL---HC--- 186

Query: 124 ALGFSATQPSMGSNLLVNGYAA-YPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVG 182
                  Q + G N  V  Y+   P Y+    ++G+ +S  + NG   +   G  L+A  
Sbjct: 187 -----QNQNNYGDNRSV--YSENRPFYS----VLGESSSCMTGNGRSNQYLTG--LDAFR 233

Query: 183 PKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLK 242
            K   KRIIDGP E+++ERRQRRMIKNRESAARSRAR+QAYTVELELEL  L  EN KLK
Sbjct: 234 IK---KRIIDGPPEILMERRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLK 290

Query: 243 EAVKELERKRVQEDIQATEDGKKE 266
           E V+E E+KR QE I  ++   KE
Sbjct: 291 EIVEENEKKRRQEIISRSKQVTKE 314

Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZDF3|TRAB1_ORYSJ bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 132/249 (53%), Gaps = 18/249 (7%)

Query: 16  LTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHV--------EPPQRQPTFGEITLE 67
           L RQ S ++P  L  KTV+EVW +++++  P              + P+RQPT GE+TLE
Sbjct: 33  LQRQGSLTLPRTLSVKTVDEVWRDLEREASPGAAAADGGGGGGEQQQPRRQPTLGEMTLE 92

Query: 68  EFLVKAGVVQEPATKPCPQSHSPPIHRSNNDS--NNNNNTCLGSAYGMGLGPSACTMMAL 125
           EFLV+AGVV+E          +         S    NN++     YG     +A    A+
Sbjct: 93  EFLVRAGVVRENTAAAAAMVAAAAAPPVAPRSIPAVNNSSIFFGNYGGVNDAAAAAAGAM 152

Query: 126 GFSAT---QPSMGSNLL--VNGYAAYPIYTAPTEL-VGQLASTDSNNGDDKEKSQGMMLE 179
           GFS      P+MG+ L+  V G     I  AP +  VGQ+ S    +GD       +   
Sbjct: 153 GFSPVGIGDPTMGNRLMSGVAGIGGGAITVAPVDTSVGQMDSAGKGDGDLSSPMAPVPYP 212

Query: 180 AVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAEND 239
             G    R R   G  E VVERRQRRMIKNRESAARSRARKQAYT+ELE E+ +LK +N 
Sbjct: 213 FEGVI--RGRRSGGNVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNM 270

Query: 240 KLKEAVKEL 248
           +L++  +E+
Sbjct: 271 ELQKKQEEI 279

Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LES3|AI5L2_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1

 Score =  108 bits (270), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 129/246 (52%), Gaps = 57/246 (23%)

Query: 16  LTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHVEPPQRQPTFGEITLEEFLVKAGV 75
           L+RQ S ++P  L KKTV+EVW +IQ+++      H E   +QPT GE+TLE+ L+KAGV
Sbjct: 76  LSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGS-AH-ERRDKQPTLGEMTLEDLLLKAGV 133

Query: 76  VQEPATKPCPQSHSPPIHRSNNDSNN---NNNTCLGSAYGMGLGPSACTMMALGFSATQP 132
           V E  T P   +H  P+   +  S      N T +G        PS            QP
Sbjct: 134 VTE--TIPG-SNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLPSM----------PQP 180

Query: 133 SMGSNLLVNGYAAYPI-----YTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNR 187
                     +  YP+       + + L+G L+ T +                      R
Sbjct: 181 --------QAFMPYPVSDMQAMVSQSSLMGGLSDTQTPG--------------------R 212

Query: 188 KRIIDGPHEVV---VERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEA 244
           KR+  G  EVV   VERRQ+RMIKNRESAARSRARKQAYT ELE+++++L+ EN++L++ 
Sbjct: 213 KRVASG--EVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQ 270

Query: 245 VKELER 250
            KE+E+
Sbjct: 271 -KEVEK 275

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q2|AI5L3_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1

 Score =  105 bits (262), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 121/248 (48%), Gaps = 59/248 (23%)

Query: 4   KLVVETAEQAATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHVEPPQRQPTFGE 63
           K V+  AE+   L RQ S ++P  L KKTV+EVW +IQ+D+            +QPT GE
Sbjct: 51  KTVLPPAEEG--LVRQGSLTLPRDLSKKTVDEVWRDIQQDKNGNGTSTTTT-HKQPTLGE 107

Query: 64  ITLEEFLVKAGVVQEPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMM 123
           ITLE+ L++AGVV E      PQ          N  N  +N      +            
Sbjct: 108 ITLEDLLLRAGVVTETV---VPQE---------NVVNIASNGQWVEYH------------ 143

Query: 124 ALGFSATQPSMGSNLLVNGYAAYPI-YTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVG 182
                  QP         G+  YP+       ++G L+ T    G               
Sbjct: 144 ------HQPQQQ-----QGFMTYPVCEMQDMVMMGGLSDTPQAPG--------------- 177

Query: 183 PKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLK 242
               RKR+     E  VERRQ+RMIKNRESAARSRARKQAYT ELE+++++L+ EN+KL+
Sbjct: 178 ----RKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEKLR 233

Query: 243 EAVKELER 250
             +KE+E+
Sbjct: 234 R-LKEVEK 240

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1

 Score =  105 bits (261), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 123/277 (44%), Gaps = 37/277 (13%)

Query: 16  LTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHVEPPQRQPTFGEITLEEFLVKAGV 75
           L RQ S ++P  L +KTV+EVW  +   +        +  +RQ T GE+TLE+FL++AGV
Sbjct: 91  LQRQGSLTLPRTLSQKTVDEVWKYLNSKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGV 150

Query: 76  VQEPATKPCPQSHSP----------------PIHRSNNDSNNNNNTCLGSAYGMGLGPSA 119
           V+E  T+    S S                 P   S + + NN++  +  A G+GL    
Sbjct: 151 VKEDNTQQNENSSSGFYANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQAPGLGLKVGG 210

Query: 120 CTMMALGFSATQPSMGSNLL---VNGYAAYPIYTAPTELV--GQLASTDSNNGDDKEKSQ 174
                      Q       L   +    A   + AP  +V  G   ++     +      
Sbjct: 211 TMQQQQQPHQQQLQQPHQRLPPTIFPKQANVTFAAPVNMVNRGLFETSADGPANSNMGGA 270

Query: 175 GMMLEAVGPKGN----------------RKRIIDGPHEVVVERRQRRMIKNRESAARSRA 218
           G  + A  P  +                R R  +   E VVERRQ+RMIKNRESAARSRA
Sbjct: 271 GGTVTATSPGTSSAENNTWSSPVPYVFGRGRRSNTGLEKVVERRQKRMIKNRESAARSRA 330

Query: 219 RKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE 255
           RKQAYT+ELE E+  LK  N  L++   E+ +    E
Sbjct: 331 RKQAYTLELEAEIESLKLVNQDLQKKQAEIMKTHNSE 367

Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1

 Score = 81.6 bits (200), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/113 (46%), Positives = 70/113 (61%), Gaps = 11/113 (9%)

Query: 144 AAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQ 203
           A  P+    +E +G+      +NGD    S    +   G +G +     G  E VVERRQ
Sbjct: 291 AVSPVTPLSSEGIGK------SNGDSSSLSPSPYMFNGGVRGRK----SGTVEKVVERRQ 340

Query: 204 RRMIKNRESAARSRARKQAYTVELELELTQLKAENDKL-KEAVKELERKRVQE 255
           RRMIKNRESAARSRARKQAYTVELE E+ +LK END+L ++  + +E ++ QE
Sbjct: 341 RRMIKNRESAARSRARKQAYTVELEAEVAKLKEENDELQRKQARIMEMQKNQE 393

Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84JK2|FD_ARATH Protein FD OS=Arabidopsis thaliana GN=FD PE=1 SV=1

 Score = 74.7 bits (182), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 17/183 (9%)

Query: 83  PCPQSHSPPIHRSNNDSNNNNNTCL-----GS--------AYGMGLGPSA-CTMMALGFS 128
           P PQ +  P  R  N  N N N+       GS        +   G  P+   T + + +S
Sbjct: 83  PHPQHNHEPRFRGQNHHNQNPNSIFQDFLKGSLNQEPAPTSQTTGSAPNGDSTTVTVLYS 142

Query: 129 ATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGN-- 186
           +  P   + L +N  A +        LV   ++  +++      +     EA+ P  +  
Sbjct: 143 SPFPPPATVLSLNSGAGFEFLDNQDPLVTSNSNLHTHHHLSNAHAFNTSFEALVPSSSFG 202

Query: 187 RKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVK 246
           +KR  D  +E    RR +RMIKNRESAARSRARKQAYT ELELE+  L+AEN +LK    
Sbjct: 203 KKRGQDS-NEGSGNRRHKRMIKNRESAARSRARKQAYTNELELEVAHLQAENARLKRQQD 261

Query: 247 ELE 249
           +L+
Sbjct: 262 QLK 264

Transcription factor required for the transition to flowering promoted by FT.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q3|AI5L6_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 51/60 (85%), Gaps = 1/60 (1%)

Query: 196 EVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKL-KEAVKELERKRVQ 254
           E V+ERRQ+RMIKNRESAARSRARKQAYT+ELE E+ QLK  N++L K+ V+ +E+++ Q
Sbjct: 369 EKVIERRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVEIMEKQKNQ 428

Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q2|AI5L7_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 48/63 (76%)

Query: 186 NRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAV 245
           NR R  +   E V+ERRQRRMIKNRESAARSRARKQAYT+ELE E+ +LK  N +L++  
Sbjct: 338 NRGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQELQKKQ 397

Query: 246 KEL 248
            E+
Sbjct: 398 AEM 400

Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
255565609	358	conserved hypothetical protein [Ricinus	0.808	0.603	0.512	7e-51
449463118	339	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.872	0.687	0.476	2e-46
449505446	295	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.872	0.789	0.476	3e-46
224102821	350	predicted protein [Populus trichocarpa]	0.794	0.605	0.497	4e-46
225464964	348	PREDICTED: protein ABSCISIC ACID-INSENSI	0.820	0.629	0.516	5e-44
147819811	338	hypothetical protein VITISV_030212 [Viti	0.816	0.644	0.506	3e-42
255575677	403	DNA binding protein, putative [Ricinus c	0.891	0.590	0.422	1e-39
356570847	387	PREDICTED: protein ABSCISIC ACID-INSENSI	0.861	0.594	0.454	5e-38
2228771	378	Dc3 promoter-binding factor-1 [Helianthu	0.835	0.589	0.412	8e-38
357511043	431	Abscisic acid insensitive [Medicago trun	0.895	0.554	0.430	1e-37

>gi|255565609|ref|XP_002523794.1| conserved hypothetical protein [Ricinus communis] gi|223536882|gb|EEF38520.1| conserved hypothetical protein [Ricinus communis]

 Score =  206 bits (525), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 156/248 (62%), Gaps = 32/248 (12%)

Query: 16  LTRQNSFSIPILLCKKTVEEVWSEIQKDQ----QPQRRCHVEPPQRQPTFGEITLEEFLV 71
           L RQ SFSIP  LCKKTV+EVW EIQK+Q    +P      EPPQRQ T GE+TLE+FLV
Sbjct: 107 LARQGSFSIPAPLCKKTVDEVWFEIQKEQPERQKPSNIDAREPPQRQQTLGEMTLEDFLV 166

Query: 72  KAGVVQEPATKPCP---QSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFS 128
           KAGVVQE AT+      Q    PI         N N CL +++GMG       +M +GF 
Sbjct: 167 KAGVVQE-ATQSAGSSLQKMVTPIQ--------NINACLDASFGMG------QVMGMGFP 211

Query: 129 ATQPSMGSNLLV-NGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNR 187
               ++G++    NG+A Y ++      +G     ++ N    E+ Q      +G + N+
Sbjct: 212 TAHQTIGNSFSTGNGFAPYQMFPQSKGFIG-----EAPNNAKTEQGQ----TELGMQQNK 262

Query: 188 KRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKE 247
           KRIIDGP EVVVERRQRRMIKNRESAARSRARKQAYTVELELEL QLK EN KLK  V+E
Sbjct: 263 KRIIDGPPEVVVERRQRRMIKNRESAARSRARKQAYTVELELELNQLKEENAKLKLLVEE 322

Query: 248 LERKRVQE 255
           +E+ R +E
Sbjct: 323 IEQNRKEE 330

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463118|ref|XP_004149281.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1-like [Cucumis sativus]

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/258 (47%), Positives = 149/258 (57%), Gaps = 25/258 (9%)

Query: 14  ATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQ-PQRRCHVE----PPQRQPTFGEITLEE 68
           + L  Q SFSIPI LC KTV+E+WSEI KDQQ P     +     P Q Q   GE+TLE+
Sbjct: 85  SNLCNQGSFSIPIPLCGKTVDEIWSEIHKDQQHPHHHKFINVQQNPCQSQQALGEMTLED 144

Query: 69  FLVKAGVVQEPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFS 128
           FLVKAGVVQE ++  C               NN +   LG   G  LG        L  S
Sbjct: 145 FLVKAGVVQEASSASCSMKQQLC------SVNNRSMVDLGFGIGEKLG--------LSLS 190

Query: 129 ATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRK 188
             Q +  + +       +  Y   T+ VG+ +   S      +K QG+M + V P  N+K
Sbjct: 191 YQQNNDAARIRNMSGNCFSNYQMLTQSVGEPSDNSS-----IQKCQGLMTDWVEP-SNKK 244

Query: 189 RIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKEL 248
           RIIDGP EVVV+RRQRRMIKNRESAARSRARKQAYTVELE+EL QLK EN KLKE V E 
Sbjct: 245 RIIDGPTEVVVQRRQRRMIKNRESAARSRARKQAYTVELEVELNQLKEENIKLKEIVAES 304

Query: 249 ERKRVQEDIQATEDGKKE 266
           ER R QE +Q  +  K++
Sbjct: 305 ERNRKQEIMQRKQCEKRQ 322

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449505446|ref|XP_004162472.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1-like [Cucumis sativus]

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/258 (47%), Positives = 149/258 (57%), Gaps = 25/258 (9%)

Query: 14  ATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQ-PQRRCHVE----PPQRQPTFGEITLEE 68
           + L  Q SFSIPI LC KTV+E+WSEI KDQQ P     +     P Q Q   GE+TLE+
Sbjct: 41  SNLCNQGSFSIPIPLCGKTVDEIWSEIHKDQQHPHHHKFINVQQNPCQSQQALGEMTLED 100

Query: 69  FLVKAGVVQEPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFS 128
           FLVKAGVVQE ++  C               NN +   LG   G  LG        L  S
Sbjct: 101 FLVKAGVVQEASSASCSMKQQLC------SVNNRSMVDLGFGIGEKLG--------LSLS 146

Query: 129 ATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRK 188
             Q +  + +       +  Y   T+ VG+ +   S      +K QG+M + V P  N+K
Sbjct: 147 YQQNNDAARIRNMSGNCFSNYQMLTQSVGEPSDNSS-----IQKCQGLMTDWVEP-SNKK 200

Query: 189 RIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKEL 248
           RIIDGP EVVV+RRQRRMIKNRESAARSRARKQAYTVELE+EL QLK EN KLKE V E 
Sbjct: 201 RIIDGPTEVVVQRRQRRMIKNRESAARSRARKQAYTVELEVELNQLKEENIKLKEIVAES 260

Query: 249 ERKRVQEDIQATEDGKKE 266
           ER R QE +Q  +  K++
Sbjct: 261 ERNRKQEIMQRKQCEKRQ 278

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102821|ref|XP_002312814.1| predicted protein [Populus trichocarpa] gi|222849222|gb|EEE86769.1| predicted protein [Populus trichocarpa]

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/243 (49%), Positives = 145/243 (59%), Gaps = 31/243 (12%)

Query: 9   TAEQAATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRR------CHVEPPQRQPTFG 62
             +Q   L RQ SFS+P  LCKKTV+EV  EIQ +++PQ+          EPPQRQ T G
Sbjct: 95  VTKQCPNLARQGSFSLPAPLCKKTVDEVLFEIQ-NEEPQQHNPNSIGADHEPPQRQQTLG 153

Query: 63  EITLEEFLVKAGVVQEPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTM 122
           EITLE+FL+KAGVVQE          + PI        + NN CL   +GMG       M
Sbjct: 154 EITLEDFLIKAGVVQEAPAGSSQHKKATPIQ-------DRNNACLDMNFGMG------HM 200

Query: 123 MALGFSATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVG 182
           M LG+     S G     NG+AAY ++  P   +G        N    EK Q +M   +G
Sbjct: 201 MGLGYQNL--SAG-----NGFAAYQMF--PQGKLGYNVGEVVPNNAKNEKCQSIM--ELG 249

Query: 183 PKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLK 242
            + ++KR+ DGP EVVVERRQRRMIKNRESAARSRARKQAYTVELELEL QLK EN KLK
Sbjct: 250 AQSSKKRMNDGPPEVVVERRQRRMIKNRESAARSRARKQAYTVELELELNQLKEENAKLK 309

Query: 243 EAV 245
           + V
Sbjct: 310 QIV 312

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464964|ref|XP_002274428.1| PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like [Vitis vinifera]

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/244 (51%), Positives = 151/244 (61%), Gaps = 25/244 (10%)

Query: 16  LTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHV---EPPQRQPTFGEITLEEFLVK 72
           L RQ SFSIP  LCKKT++EVWSEI K++Q Q   +    +  Q + TFGE+TLE+FLVK
Sbjct: 92  LPRQASFSIPPPLCKKTIDEVWSEINKNKQQQNSNNNGSNDSVQGEQTFGEMTLEDFLVK 151

Query: 73  AGVVQ----EPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFS 128
           AGVVQ    E A+    +    P  RS   S  NNNT L + +G+G       MM L FS
Sbjct: 152 AGVVQDVFVEEASGSSKRHMLTPTQRSG--SFPNNNTNLETTFGIG------NMMGLEFS 203

Query: 129 ATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRK 188
           A+Q S G+NL  N  AAY       +  G+ ++T       KE+ +G      G +  RK
Sbjct: 204 ASQNS-GNNLSSNDLAAY--LAQGNKFPGESSNT-------KEEEKGESAPQPGGQRGRK 253

Query: 189 RIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKEL 248
           R  DG  E+ VERRQRRMIKNRESAARSRARKQAYTVELELEL QLK EN KLK+ V E 
Sbjct: 254 RTTDGTLEMAVERRQRRMIKNRESAARSRARKQAYTVELELELNQLKEENTKLKKIVAEA 313

Query: 249 ERKR 252
           ERKR
Sbjct: 314 ERKR 317

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147819811|emb|CAN60742.1| hypothetical protein VITISV_030212 [Vitis vinifera]

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/243 (50%), Positives = 150/243 (61%), Gaps = 25/243 (10%)

Query: 16  LTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHV---EPPQRQPTFGEITLEEFLVK 72
           L RQ SFSIP  LCKKT++EVWSEI K++Q Q   +    +  Q + TFGE+TLE+FLVK
Sbjct: 92  LPRQASFSIPPPLCKKTIDEVWSEINKNKQQQNSNNNGSNDSVQGEQTFGEMTLEDFLVK 151

Query: 73  AGVVQ----EPATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGFS 128
           AGVVQ    E A+    +    P  RS   S  NNNT L + +G+G       MM L FS
Sbjct: 152 AGVVQDVFVEEASGSSKRHMLTPTQRSG--SFPNNNTNLETTFGIG------NMMGLEFS 203

Query: 129 ATQPSMGSNLLVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEKSQGMMLEAVGPKGNRK 188
           A+Q S G+NL  N  AAY       +  G+ ++T       KE+ +G      G +  RK
Sbjct: 204 ASQNS-GNNLSSNDLAAY--LAQGNKFPGESSNT-------KEEEKGESAPQPGGQRGRK 253

Query: 189 RIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKEL 248
           R  DG  E+ VERRQRRMIKNRESAARSRARKQAYTVELELEL QLK EN KLK+ V+ +
Sbjct: 254 RTTDGTLEMAVERRQRRMIKNRESAARSRARKQAYTVELELELNQLKEENTKLKKIVQAI 313

Query: 249 ERK 251
           E K
Sbjct: 314 EGK 316

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575677|ref|XP_002528738.1| DNA binding protein, putative [Ricinus communis] gi|223531832|gb|EEF33650.1| DNA binding protein, putative [Ricinus communis]

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/289 (42%), Positives = 154/289 (53%), Gaps = 51/289 (17%)

Query: 15  TLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCHV-------------EPPQRQPTF 61
           +L RQ S ++P  LC+KTV+EVWSEI ++QQ + + H              E   RQPTF
Sbjct: 117 SLPRQGSLTLPAPLCRKTVDEVWSEIHREQQ-RGQGHSSTSSSGDNNMQNPESAARQPTF 175

Query: 62  GEITLEEFLVKAGVVQEPATKPCPQ---SHSPPIHRSNNDSNNNNNTCLGSAY------- 111
           GE+TLE+FLVKAG+V+E  +   P    SH    +   N S  NNN  +G+ +       
Sbjct: 176 GEMTLEDFLVKAGIVREHGSPAAPSILPSHQQQQYVLYNQSVTNNNHAIGTGFVSRPVLG 235

Query: 112 -----GMGLGPSACTMMA--LGFSATQPSMGSNLLVNGYAA-----------YPIYTAPT 153
                  G        MA   G +   P   +  +  G  A                APT
Sbjct: 236 VSGGGTGGGNSVGYQTMAPQSGAAGETPGRNAGFIPQGAVAPSGSVYGGRVGNGGGYAPT 295

Query: 154 E---LVGQLASTDS----NNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRM 206
           E   +VGQ++   S    N   D   +Q   ++  G +G RKRIIDGP E VVERRQRRM
Sbjct: 296 EGMGVVGQVSPVSSDAMVNTSVDNTANQ-FGIDMGGLRG-RKRIIDGPVEKVVERRQRRM 353

Query: 207 IKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE 255
           IKNRESAARSRARKQAYTVELE EL QLK EN +L+  + ELERKR Q+
Sbjct: 354 IKNRESAARSRARKQAYTVELEAELNQLKEENKQLRHVLTELERKRKQQ 402

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570847|ref|XP_003553595.1| PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like [Glycine max]

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/264 (45%), Positives = 155/264 (58%), Gaps = 34/264 (12%)

Query: 15  TLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRC------HVEPPQRQPTFGEITLEE 68
           +L RQ S S+P  LC+KTV+EVWS+IQK+Q            + E   RQPTFGE+TLE+
Sbjct: 104 SLPRQPSLSLPAPLCRKTVDEVWSQIQKEQNKNNNISNVLNDNTESAPRQPTFGEMTLED 163

Query: 69  FLVKAGVVQEPATKP-CPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTMMALGF 127
           FLVKAGVV+E    P  P SHS   H+ +  +NNNN     S  G  +G +   ++A G+
Sbjct: 164 FLVKAGVVRETTCAPPLPVSHS---HQPHYANNNNNVAMAPSFVGRHVG-AVSNVVAPGY 219

Query: 128 SATQPSMGSNLLVNGYA---------------AYPIYTAPT-ELVGQLASTDSNNGDDKE 171
              Q  +G      GY                       PT  + G ++  +S++G   +
Sbjct: 220 ---QQVVGE--ASGGYGKRDHNGGGYHCFGGGGGGYGVGPTMGMGGPVSPANSSDGIGND 274

Query: 172 KSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELEL 231
             Q   L+  G +G RKR++DGP E VVERRQRRMIKNRESAARSRARKQAYTVELE EL
Sbjct: 275 GGQ-FGLDMGGLRG-RKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEL 332

Query: 232 TQLKAENDKLKEAVKELERKRVQE 255
            QL+ EN +LK+A+ ELER R Q+
Sbjct: 333 NQLREENSQLKQALAELERGRKQQ 356

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2228771|gb|AAC49759.1| Dc3 promoter-binding factor-1 [Helianthus annuus]

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/296 (41%), Positives = 157/296 (53%), Gaps = 73/296 (24%)

Query: 15  TLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRR-------CHVEPP--QRQPTFGEIT 65
           +L+RQ S ++P  L +KTV+EVWSEIQK +Q  ++       C+ + P  QRQPT+GE+T
Sbjct: 70  SLSRQGSLTLPGPLSRKTVDEVWSEIQKTRQDHQQPSNDNNSCNEQVPGAQRQPTYGEMT 129

Query: 66  LEEFLVKAGVVQE---PATKPCPQSHSPPIHRSNNDSNNNNNTCLGSAYGMGLGPSACTM 122
           LE+FLVKAGVV+E   P   P PQ    P       +N NN         +G  PS+  M
Sbjct: 130 LEDFLVKAGVVREQNHPNAPPVPQQV--PASFGLYPTNGNNRI-------IGPPPSSAHM 180

Query: 123 M--ALGFSATQPSMGSNL------LVNGYAAYP--------------------------- 147
           +   LG S      G+++      L+     YP                           
Sbjct: 181 VRPMLGLST---GGGASVIPPYSPLIRETPGYPGGKRAGNYQQQPPPYGGIGGNAGGVAG 237

Query: 148 ------IYTAPTELVGQ--LASTDSNNGDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVV 199
                    +P   V    +A+T  ++G+         LE  G +G RKRIIDGP E VV
Sbjct: 238 GYGQGLGIGSPPSPVSSDGIATTQLDSGNQ------YALEMGGIRGGRKRIIDGPVEKVV 291

Query: 200 ERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE 255
           ERRQRRMIKNRESAARSRARKQAYTVELE EL  LK EN +LK+A+ E+ERKR Q+
Sbjct: 292 ERRQRRMIKNRESAARSRARKQAYTVELEAELNMLKEENAQLKQALAEIERKRKQQ 347

Source: Helianthus annuus

Species: Helianthus annuus

Genus: Helianthus

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511043|ref|XP_003625810.1| Abscisic acid insensitive [Medicago truncatula] gi|355500825|gb|AES82028.1| Abscisic acid insensitive [Medicago truncatula]

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 163/295 (55%), Gaps = 56/295 (18%)

Query: 14  ATLTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRCH-----VEPPQRQPTFGEITLEE 68
           A+L RQNS SIP  LC+KTVE+VWSEI K+QQ     +      E   RQPTFGE+TLE+
Sbjct: 109 ASLPRQNSLSIPAPLCRKTVEQVWSEIHKEQQNHHNINNVAQNTESTPRQPTFGEMTLED 168

Query: 69  FLVKAGVVQEPAT-----------KPCPQSHSPPI-HRSNNDSNNNNNTCLGSAYGMGLG 116
           FLVKAGVV+E  +                SH P   H +    NNN+     +++ +G G
Sbjct: 169 FLVKAGVVREQQSGMPVAIAPPPTAAAVSSHRPQQQHYAAVYPNNNSTMAQAASFAIGGG 228

Query: 117 ----------------------PSACTMMALGFSATQPSMGSNL------------LVNG 142
                                 PS+     +G   T+ S+G+              +VNG
Sbjct: 229 GNLNVVAPPYQTVAQGGGAVGEPSSSGY--VGNGKTRDSIGTGYPPPPPAICYGGRVVNG 286

Query: 143 YAA-YPIYTAPTELVGQLASTDSNNGDDKEKSQGMM-LEAVGPKGNRKRIIDGPHEVVVE 200
            A  Y +  A T  +G   S  S++G   E S G   ++  G +G RKR++DGP E VVE
Sbjct: 287 AAGGYGVAVAQTMGMGGPVSPVSSDGIGNENSGGQFGIDMNGLRG-RKRMVDGPVERVVE 345

Query: 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE 255
           RRQRRMIKNRESAARSRARKQAYTVELE EL QL+ EN +LK+A+ ELER+R Q+
Sbjct: 346 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLKQALAELERRRRQQ 400

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
TAIR|locus:2049425	442	ABI5 "ABA INSENSITIVE 5" [Arab	0.756	0.457	0.461	2.8e-40
UNIPROTKB|Q6ZDF3	318	TRAB1 "bZIP transcription fact	0.853	0.716	0.396	1.8e-32
UNIPROTKB|Q8RZ35	388	P0489B03.11 "Putative ABA resp	0.883	0.608	0.393	1e-29
TAIR|locus:2063275	262	EEL "AT2G41070" [Arabidopsis t	0.235	0.240	0.625	3.7e-29
TAIR|locus:2076018	331	DPBF2 "AT3G44460" [Arabidopsis	0.760	0.613	0.404	2e-28
TAIR|locus:2103665	297	AREB3 "ABA-responsive element	0.235	0.212	0.615	2.6e-27
TAIR|locus:2118969	454	ABF3 "AT4G34000" [Arabidopsis	0.220	0.129	0.65	1.6e-23
TAIR|locus:2172507	315	AT5G44080 [Arabidopsis thalian	0.303	0.257	0.456	8.1e-15
TAIR|locus:2159986	370	AT5G42910 "AT5G42910" [Arabido	0.209	0.151	0.578	8.7e-15
TAIR|locus:2024224	270	GBF4 "G-box binding factor 4"	0.269	0.266	0.458	6.4e-13

TAIR|locus:2049425 ABI5 "ABA INSENSITIVE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 101/219 (46%), Positives = 124/219 (56%)

Query:    53 EPPQRQPTFGEITLEEFLVKAGVVQEPATKPCP-----QSHSP----PIHRXXXXXXXXX 103
             E   RQPTFGE+TLE+FLVKAGVV+E  T P P     Q+ +P    P            
Sbjct:   194 ETAARQPTFGEMTLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQLYGVFQ 253

Query:   104 XTCLGSAYG--MGLG-PSACTMMALGFSATQ-PSMGSNLLVNGYAAYPIYTAPTELVGQL 159
              T   S  G  MG+G PS       G    Q P + + +   G   +        +VG L
Sbjct:   254 GTGDPSFPGQAMGVGDPSGYAKRTGGGGYQQAPPVQAGVCYGGGVGFGAGGQQMGMVGPL 313

Query:   160 ASTDSNN-GDDKEKSQGMM--LEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARS 216
             +   S+  G  +  + G    ++  G +G RKR++DGP E VVERRQRRMIKNRESAARS
Sbjct:   314 SPVSSDGLGHGQVDNIGGQYGVDMGGLRG-RKRVVDGPVEKVVERRQRRMIKNRESAARS 372

Query:   217 RARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE 255
             RARKQAYTVELE EL QLK EN +LK A+ ELERKR Q+
Sbjct:   373 RARKQAYTVELEAELNQLKEENAQLKHALAELERKRKQQ 411

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048316 "seed development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010200 "response to chitin" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IEP;RCA

GO:0010187 "negative regulation of seed germination" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q6ZDF3 TRAB1 "bZIP transcription factor TRAB1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 100/252 (39%), Positives = 137/252 (54%)

Query:    16 LTRQNSFSIPILLCKKTVEEVWSEIQKDQQPQRRC--------HVEPPQRQPTFGEITLE 67
             L RQ S ++P  L  KTV+EVW +++++  P              + P+RQPT GE+TLE
Sbjct:    33 LQRQGSLTLPRTLSVKTVDEVWRDLEREASPGAAAADGGGGGGEQQQPRRQPTLGEMTLE 92

Query:    68 EFLVKAGVVQE---PATKPCPQSHSPPIHRXXXXXXXXXXTCLGSAYGMGLGPSACTMM- 123
             EFLV+AGVV+E    A      + +PP+               G+ YG G+  +A     
Sbjct:    93 EFLVRAGVVRENTAAAAAMVAAAAAPPVAPRSIPAVNNSSIFFGN-YG-GVNDAAAAAAG 150

Query:   124 ALGFSAT---QPSMGSNLL--VNGYAAYPIYTAPTEL-VGQLASTDSNNGDDKEKSQGMM 177
             A+GFS      P+MG+ L+  V G     I  AP +  VGQ+ S    +GD       + 
Sbjct:   151 AMGFSPVGIGDPTMGNRLMSGVAGIGGGAITVAPVDTSVGQMDSAGKGDGDLSSPMAPVP 210

Query:   178 LEAVGP-KGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKA 236
                 G  +G R     G  E VVERRQRRMIKNRESAARSRARKQAYT+ELE E+ +LK 
Sbjct:   211 YPFEGVIRGRRS---GGNVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKE 267

Query:   237 ENDKLKEAVKEL 248
             +N +L++  +E+
Sbjct:   268 QNMELQKKQEEI 279

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

UNIPROTKB|Q8RZ35 P0489B03.11 "Putative ABA response element binding factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 107/272 (39%), Positives = 131/272 (48%)

Query:    16 LTRQNSFSIPILLCKKTVEEVWSEIQKDQ----------QPQRRCH-VEPPQRQPTFGEI 64
             L RQ SFS+P+ LC+KTVEEVW+EI +            QP      V    RQ T GE+
Sbjct:   113 LCRQGSFSLPLPLCQKTVEEVWTEINQAPAHTSAPASALQPHAGSGGVAANDRQVTLGEM 172

Query:    65 TLEEFLVKAGVVQEPATKPCPQSHSPPIHRXXXXXXXXXXTCLGSAYGMGLGPSACTMMA 124
             TLE+FLVKAGVV+   T       S  ++              G    M  G     M  
Sbjct:   173 TLEDFLVKAGVVRGSFTGQAAMG-SGMVN--------------GPVNPMQQGQGGPMMFP 217

Query:   125 LG-FSATQPSMGSNL-LVNGYAAYPIYTAPTELVGQLASTDSNNGDDKEK-SQGMMLEAV 181
             +G  +A  P MG  +    GY    I   P    G +      + D     +   M+  +
Sbjct:   218 VGPVNAMYPVMGDGMGYPGGYNGMAIVPPPPPAQGAMVVVSPGSSDGMSAMTHADMMNCI 277

Query:   182 G-----PKGNRKRII--DGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQL 234
             G       G RKR    DG  E  VERRQRRMIKNRESAARSRARKQAYTVELE EL  L
Sbjct:   278 GNGMMIENGTRKRPHREDGCAEKTVERRQRRMIKNRESAARSRARKQAYTVELEAELNYL 337

Query:   235 KAENDKLKEAVKELERKRVQEDIQATEDGKKE 266
             K EN +LKEA K +   + Q  ++   +  KE
Sbjct:   338 KQENARLKEAEKTVLLTKKQMLVEKMMEQSKE 369

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

TAIR|locus:2063275 EEL "AT2G41070" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 40/64 (62%), Positives = 53/64 (82%)

Query:   187 RKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVK 246
             RKR+     E  VERRQ+RMIKNRESAARSRARKQAYT ELE+++++L+ EN+KL+  +K
Sbjct:   178 RKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEKLRR-LK 236

Query:   247 ELER 250
             E+E+
Sbjct:   237 EVEK 240

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2076018 DPBF2 "AT3G44460" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 89/220 (40%), Positives = 115/220 (52%)

Query:    55 PQRQPTFGEITLEEFLVKAGVVQEPATKPCPQSHSPPIHRXXXXXXXXXXTCLGSAYGMG 114
             P  + T  E+ LE   ++ GV Q P +    Q+ +  I R            L  A G+ 
Sbjct:   104 PLCKKTVDEVWLE---IQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFLVKA-GVV 159

Query:   115 LGPSACTM-MALGFSATQPSMGSNLLVNGYAAY----PIYTA--PT-ELVGQLASTDSNN 166
               P   TM M+       P  G  L       Y     +Y+   P   ++G+ +S  + N
Sbjct:   160 QEPLKTTMRMSSSDFGYNPEFGVGLHCQNQNNYGDNRSVYSENRPFYSVLGESSSCMTGN 219

Query:   167 GDDKEKSQGMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVE 226
             G   +   G  L+A   K   KRIIDGP E+++ERRQRRMIKNRESAARSRAR+QAYTVE
Sbjct:   220 GRSNQYLTG--LDAFRIK---KRIIDGPPEILMERRQRRMIKNRESAARSRARRQAYTVE 274

Query:   227 LELELTQLKAENDKLKEAVKELERKRVQEDIQATEDGKKE 266
             LELEL  L  EN KLKE V+E E+KR QE I  ++   KE
Sbjct:   275 LELELNNLTEENTKLKEIVEENEKKRRQEIISRSKQVTKE 314

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2103665 AREB3 "ABA-responsive element binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
 Identities = 40/65 (61%), Positives = 54/65 (83%)

Query:   187 RKRIIDGPH-EVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAV 245
             RKR+  G   E  VERRQ+RMIKNRESAARSRARKQAYT ELE+++++L+ EN++L++  
Sbjct:   212 RKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQ- 270

Query:   246 KELER 250
             KE+E+
Sbjct:   271 KEVEK 275

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2118969 ABF3 "AT4G34000" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
 Identities = 39/60 (65%), Positives = 51/60 (85%)

Query:   196 EVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKL-KEAVKELERKRVQ 254
             E V+ERRQ+RMIKNRESAARSRARKQAYT+ELE E+ QLK  N++L K+ V+ +E+++ Q
Sbjct:   369 EKVIERRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVEIMEKQKNQ 428

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2172507 AT5G44080 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
 Identities = 37/81 (45%), Positives = 54/81 (66%)

Query:   175 GMMLEAVGPKGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQL 234
             G+ +   G +G R R++  P +    +RQRRMIKNRESAARSR RKQAY VELE    +L
Sbjct:   207 GLDVYGGGARGKRARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKL 266

Query:   235 KAENDKLKEAVKELERKRVQE 255
             + EN+ L + +++  ++R Q+
Sbjct:   267 EEENELLSKEIEDKRKERYQK 287

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2159986 AT5G42910 "AT5G42910" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:   199 VERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE 255
             V+++ RR IKNRESAARSRARKQA T+E+E+EL  LK + ++L +   EL RKR  E
Sbjct:   293 VDKKLRRKIKNRESAARSRARKQAQTMEVEVELENLKKDYEELLKQHVEL-RKRQME 348

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2024224 GBF4 "G-box binding factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
 Identities = 33/72 (45%), Positives = 50/72 (69%)

Query:   184 KGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKE 243
             +G R R++    +    +RQ+RMIKNRESAARSR RKQAY VELE    +L+ EN++L +
Sbjct:   172 RGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQVELETLAAKLEEENEQLLK 231

Query:   244 AVKELERKRVQE 255
              ++E  ++R ++
Sbjct:   232 EIEESTKERYKK 243

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_IX000057 hypothetical protein (350 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	267
smart00338	65	smart00338, BRLZ, basic region leucin zipper	3e-14
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	3e-11
pfam07716	54	pfam07716, bZIP_2, Basic region leucine zipper	3e-09
cd12193	54	cd12193, B_zip1, basic leucine zipper DNA-binding	2e-06

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 26/53 (49%), Positives = 40/53 (75%)

Query: 200 ERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR 252
           E+R+RR  +NRE+A RSR RK+A   ELE ++ QL+AEN++LK+ ++ L R+ 
Sbjct: 4   EKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERLRREL 56

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 24/49 (48%), Positives = 36/49 (73%)

Query: 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELE 249
           +R+RR  KNRE+A RSR RK+AY  ELE ++ +L+AEN  L+  ++ L+
Sbjct: 5   KRERRRQKNREAARRSRLRKKAYIEELEEKVKELEAENKTLRSELERLK 53

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 200 ERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELER 250
           E R RR  +N E+A RSR +K+    ELE  + +L+ EN +L++ V++LE+
Sbjct: 4   EYRDRRR-RNNEAARRSREKKKQREEELEERVKELEEENAQLRQKVEQLEK 53

Length = 54

>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELE 249
            R R+  +NRE+A RSRARK     +LE ++ +L +EN  L++ V  L+
Sbjct: 2   PRARKRARNREAARRSRARKMERMKQLEDKVEELTSENSDLEDEVDRLK 50

Basic leucine zipper (bZIP) transcription factors act in networks of homo- and hetero-dimers in the regulation in a diverse set of cellular pathways. Classical leucine zippers have alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization creates a pair of basic regions that bind DNA and undergo conformational change. GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain, comprised of a basic alpha-helical DNA-binding region and a coiled-coil dimerization region. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	267
KOG3584	348	consensus cAMP response element binding protein an	99.39
smart00338	65	BRLZ basic region leucin zipper.	99.3
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	99.24
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	99.17
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	99.15
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	99.05
KOG4005	292	consensus Transcription factor XBP-1 [Transcriptio	98.72
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	98.02
KOG0837	279	consensus Transcriptional activator of the JUN fam	97.99
KOG3119	269	consensus Basic region leucine zipper transcriptio	97.35
KOG4196	135	consensus bZIP transcription factor MafK [Transcri	97.29
KOG4571	294	consensus Activating transcription factor 4 [Trans	97.25
KOG3863	604	consensus bZIP transcription factor NRF1 [Transcri	95.98
PHA03155	115	hypothetical protein; Provisional	89.94
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	89.35
PF05812	118	Herpes_BLRF2: Herpesvirus BLRF2 protein; InterPro:	86.24
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	85.89
PHA03162	135	hypothetical protein; Provisional	85.62
PF01166	59	TSC22: TSC-22/dip/bun family; InterPro: IPR000580	81.45
PRK00888	105	ftsB cell division protein FtsB; Reviewed	80.95

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=99.39  E-value=5.2e-13  Score=124.77  Aligned_cols=61  Identities=31%  Similarity=0.438  Sum_probs=56.7

Q ss_pred             ChhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          194 PHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQ  254 (267)
Q Consensus       194 ~~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~k~  254 (267)
                      ..|+..+||+-|++||||+|++||+|||+|+.|||.+|..||..|+.|.++|+.|++.+.+
T Consensus       284 ~aee~trKRevRLmKNREAARECRRKKKEYVKCLENRVAVLENQNKaLIEELKtLKeLYc~  344 (348)
T KOG3584|consen  284 GAEEATRKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKALIEELKTLKELYCH  344 (348)
T ss_pred             cchhhhhHHHHHHHhhHHHHHHHHHhHhHHHHHHHhHHHHHhcccHHHHHHHHHHHHHhhc
Confidence            3567788999999999999999999999999999999999999999999999999987754

>smart00338 BRLZ basic region leucin zipper

Probab=99.30  E-value=1.2e-11  Score=91.01  Aligned_cols=55  Identities=47%  Similarity=0.636  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          198 VVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       198 ~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      .++++.+|+++||+||++||.||++|+.+||.++..|+.+|..|..++..|....
T Consensus         2 ~~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L~~~~~~l~~e~   56 (65)
T smart00338        2 EDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERLRREL   56 (65)
T ss_pred             ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999999987653

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=99.24  E-value=5.5e-11  Score=87.36  Aligned_cols=58  Identities=38%  Similarity=0.593  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          198 VVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE  255 (267)
Q Consensus       198 ~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~k~~  255 (267)
                      +..++.+|+++||+||++||.||++|+.+||.+|..|+.+|..|+.++..|......-
T Consensus         2 ~~~k~~~rr~rNR~AAr~~R~RKk~~~~~Le~~~~~L~~en~~L~~~~~~L~~~~~~L   59 (64)
T PF00170_consen    2 KEDKRERRRERNREAARRSRQRKKQYIEELEEKVEELESENEELKKELEQLKKEIQSL   59 (64)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999999999999998775543

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=99.17  E-value=6.9e-11  Score=117.74  Aligned_cols=58  Identities=45%  Similarity=0.654  Sum_probs=50.0

Q ss_pred             ChhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          194 PHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       194 ~~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      .+|.++-||+.|||||||||+.||+|||+|+..||.++..|..||+.|+++...|.+.
T Consensus       274 ~~d~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~rLq~ll~Ene~Lk~ENatLk~q  331 (655)
T KOG4343|consen  274 GSDIKVLKRQQRMIKNRESACQSRKKKKEYMLGLEARLQALLSENEQLKKENATLKRQ  331 (655)
T ss_pred             ccCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            4678899999999999999999999999999999999988777777777776666443

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=99.15  E-value=2.2e-10  Score=81.94  Aligned_cols=52  Identities=46%  Similarity=0.695  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          198 VVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELER  250 (267)
Q Consensus       198 ~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~  250 (267)
                      .++++.+|. +||+||++||.||++|+.+||.++..|+.+|..|..++..|+.
T Consensus         2 ~~~~~~rR~-rNr~AA~r~R~rkk~~~~~le~~~~~L~~en~~L~~~i~~L~~   53 (54)
T PF07716_consen    2 DEEKRERRE-RNREAARRSRQRKKQREEELEQEVQELEEENEQLRQEIAQLER   53 (54)
T ss_dssp             CHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            356788888 9999999999999999999999999999999999999998864

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=99.05  E-value=2.1e-10  Score=112.58  Aligned_cols=65  Identities=34%  Similarity=0.463  Sum_probs=57.4

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 037676          196 EVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQEDIQATE  261 (267)
Q Consensus       196 e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~k~~~~e~~~  261 (267)
                      |+++.||.||+|||.+||++||+|||+|++.||.+|.....||.+|++++++|+. .+.-|++.|+
T Consensus       246 EEriLKrvRRKIrNK~SAQESRrkKkeYid~LE~rv~~~taeNqeL~kkV~~Le~-~N~sLl~qL~  310 (472)
T KOG0709|consen  246 EERILKRVRRKIRNKRSAQESRRKKKEYIDGLESRVSAFTAENQELQKKVEELEL-SNRSLLAQLK  310 (472)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHhHhhHHHHHhhhhhhcccCcHHHHHHHHHHhh-ccHHHHHHHH
Confidence            6788899999999999999999999999999999999999999999999998854 3555665554

>KOG4005 consensus Transcription factor XBP-1 [Transcription]

Probab=98.72  E-value=7.1e-08  Score=88.77  Aligned_cols=56  Identities=36%  Similarity=0.440  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          198 VVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRV  253 (267)
Q Consensus       198 ~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~k  253 (267)
                      -+||-+||++|||.+|+-+|-|||+.++++|.++..|.+||..|+.+...|.+.-+
T Consensus        66 ~EEK~~RrKLKNRVAAQtaRDrKKaRm~eme~~i~dL~een~~L~~en~~Lr~~n~  121 (292)
T KOG4005|consen   66 WEEKVQRRKLKNRVAAQTARDRKKARMEEMEYEIKDLTEENEILQNENDSLRAINE  121 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999988888877766655433

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=98.02  E-value=4.1e-07  Score=71.60  Aligned_cols=54  Identities=35%  Similarity=0.495  Sum_probs=43.0

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          195 HEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKEL  248 (267)
Q Consensus       195 ~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L  248 (267)
                      -+....|..||.+|||.+|+.||.||..++++||.++..|+.+...|..++..+
T Consensus        24 ~q~~~lK~~RRr~KNR~~A~~cR~rk~~~~~~Le~e~~~l~~~~~~L~~e~~~l   77 (92)
T PF03131_consen   24 EQIAELKQRRRRLKNRGYAQNCRKRKLDQIEELEEEIEQLRQEIEQLQQELSEL   77 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345667899999999999999999999999999999977655555555444443

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]

Probab=97.99  E-value=3.6e-05  Score=71.73  Aligned_cols=79  Identities=24%  Similarity=0.267  Sum_probs=59.6

Q ss_pred             CCCCC-CCCCChhhHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Q 037676          185 GNRKR-IIDGPHEVVVERRQR-RMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELE---RKRVQEDIQA  259 (267)
Q Consensus       185 rgrk~-~~~~~~e~~~erRqr-R~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~---~~~k~~~~e~  259 (267)
                      ++++- +++-++|..+..|.. ..++|||+|.+||+||-+++..||.+|..|+-+|..|-..+..|.   ...++.++|-
T Consensus       188 ~~~~~pispid~e~qe~~kleRkrlrnreaa~Kcr~rkLdrisrLEdkv~~lk~~n~~L~~~l~~l~~~v~e~k~~V~~h  267 (279)
T KOG0837|consen  188 PELKEPISPIDMEDQEKIKLERKRLRNREAASKCRKRKLDRISRLEDKVKTLKIYNRDLASELSKLKEQVAELKQKVMEH  267 (279)
T ss_pred             cccCCCCCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            45553 334456655544444 468999999999999999999999999999999998887766554   5566777777


Q ss_pred             hhhc
Q 037676          260 TEDG  263 (267)
Q Consensus       260 ~~~~  263 (267)
                      +..|
T Consensus       268 i~ng  271 (279)
T KOG0837|consen  268 IHNG  271 (279)
T ss_pred             Hhcc
Confidence            7655

>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription]

Probab=97.35  E-value=0.0008  Score=62.54  Aligned_cols=64  Identities=23%  Similarity=0.393  Sum_probs=55.5

Q ss_pred             CCCCCCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          188 KRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       188 k~~~~~~~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      ++....+.+++..+-..|..||=++|++||.+.|.-..+...+|..|+.||..|+.++.+|+..
T Consensus       181 ~~~~~~~~~~~~~~y~err~rNN~A~~kSR~~~k~~~~e~~~r~~~leken~~lr~~v~~l~~e  244 (269)
T KOG3119|consen  181 KSKLSSPVEKKDPEYKERRRRNNEAVRKSRDKRKQKEDEMAHRVAELEKENEALRTQVEQLKKE  244 (269)
T ss_pred             hccCCCchhcCCHHHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3555566777777777888899999999999999999999999999999999999999988654

>KOG4196 consensus bZIP transcription factor MafK [Transcription]

Probab=97.29  E-value=0.0021  Score=54.64  Aligned_cols=60  Identities=33%  Similarity=0.439  Sum_probs=46.7

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Q 037676          195 HEVVVERRQRRMIKNRESAARSRARKQAYTVELELEL-------TQLKAENDKLKEAVKELERKRVQ  254 (267)
Q Consensus       195 ~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v-------~~L~~EN~~L~~~l~~L~~~~k~  254 (267)
                      -|....|..||-+|||=-|+-||.|+-..-++||.+.       .+|++||.++++++..++.++..
T Consensus        47 eEVvrlKQrRRTLKNRGYA~sCR~KRv~Qk~eLE~~k~~L~qqv~~L~~e~s~~~~E~da~k~k~e~  113 (135)
T KOG4196|consen   47 EEVVRLKQRRRTLKNRGYAQSCRVKRVQQKHELEKEKAELQQQVEKLKEENSRLRRELDAYKSKYEA  113 (135)
T ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556678888999999999999999999988988754       55677777777777766666543

>KOG4571 consensus Activating transcription factor 4 [Transcription]

Probab=97.25  E-value=0.0021  Score=60.83  Aligned_cols=57  Identities=33%  Similarity=0.391  Sum_probs=46.3

Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHh
Q 037676          204 RRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK---RVQEDIQAT  260 (267)
Q Consensus       204 rR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~---~k~~~~e~~  260 (267)
                      |..+.|..+|.|=|+||++-.+.|+.++..|+.+|.+||.+..+|+.+   .|+.++|..
T Consensus       230 rkr~qnk~AAtRYRqKkRae~E~l~ge~~~Le~rN~~LK~qa~~lerEI~ylKqli~e~~  289 (294)
T KOG4571|consen  230 RKRQQNKAAATRYRQKKRAEKEALLGELEGLEKRNEELKDQASELEREIRYLKQLILEVY  289 (294)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334555567999999999999999999999999999999999999754   345555543

>KOG3863 consensus bZIP transcription factor NRF1 [Transcription]

Probab=95.98  E-value=0.0083  Score=61.69  Aligned_cols=50  Identities=34%  Similarity=0.412  Sum_probs=43.3

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          200 ERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELE  249 (267)
Q Consensus       200 erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~  249 (267)
                      .|-.||.=|||.+|++||+||-.-|..||.+|..|..|-+.|.++..++.
T Consensus       489 IrDIRRRgKNkvAAQnCRKRKLd~I~nLE~ev~~l~~eKeqLl~Er~~~d  538 (604)
T KOG3863|consen  489 IRDIRRRGKNKVAAQNCRKRKLDCILNLEDEVEKLQKEKEQLLRERDELD  538 (604)
T ss_pred             hhccccccccchhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45567889999999999999999999999999999988888887665553

>PHA03155 hypothetical protein; Provisional

Probab=89.94  E-value=0.58  Score=39.18  Aligned_cols=38  Identities=34%  Similarity=0.359  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHh
Q 037676          223 YTVELELELTQLKAENDKLKEAVKE--------LERKRVQEDIQAT  260 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~--------L~~~~k~~~~e~~  260 (267)
                      -+++|+.++.+|+-||..|++++..        |...+++.+|-..
T Consensus         9 tvEeLaaeL~kL~~ENK~LKkkl~~~~~p~d~~LT~~qKea~I~s~   54 (115)
T PHA03155          9 DVEELEKELQKLKIENKALKKKLLQHGNPEDELLTPAQKDAIINSL   54 (115)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHccCCCCccccCHHHHHHHHHHH
Confidence            4789999999999999999999966        6677777766544

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=89.35  E-value=0.016  Score=56.46  Aligned_cols=56  Identities=27%  Similarity=0.302  Sum_probs=50.7

Q ss_pred             hhHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 037676          196 EVVVERRQRRMIKNRESAAR---SRARKQAYTVELELELTQLK-AENDKLKEAVKELERK  251 (267)
Q Consensus       196 e~~~erRqrR~ikNReSA~r---SR~RKk~y~~eLE~~v~~L~-~EN~~L~~~l~~L~~~  251 (267)
                      .+.+.++..|+.+|+.+|..   ||.|++.++.+|+.+|+.|+ .+|..|..++..|...
T Consensus       149 ~~~~~~~~~rr~rn~~aA~~~~~~r~~~~~~t~~l~~qv~~l~~~~~~~l~~~is~Lqne  208 (395)
T KOG1414|consen  149 PEPEEKRLLRRERNPVAAAKPIPCRNRKKPSTSPLQRQVELLPPGINSPLSPQISPLQNE  208 (395)
T ss_pred             CcchHHHHhhccccccccCCCCCCccccccccccccchHhhcCCCCCcccCccccccccH
Confidence            45678999999999999999   99999999999999999999 9999998888887654

>PF05812 Herpes_BLRF2: Herpesvirus BLRF2 protein; InterPro: IPR008642 This family consists of several herpes virus BLRF2 tegument proteins

Probab=86.24  E-value=1.3  Score=37.34  Aligned_cols=28  Identities=36%  Similarity=0.489  Sum_probs=23.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          220 KQAYTVELELELTQLKAENDKLKEAVKE  247 (267)
Q Consensus       220 Kk~y~~eLE~~v~~L~~EN~~L~~~l~~  247 (267)
                      |..-+++|+.++.+|+-||..|++++..
T Consensus         1 k~~t~EeLaaeL~kLqmENk~LKkkl~~   28 (118)
T PF05812_consen    1 KDMTMEELAAELQKLQMENKALKKKLRQ   28 (118)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            4456899999999999999999999875

; PDB: 2OA5_B 2H3R_D.

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=85.89  E-value=0.15  Score=49.73  Aligned_cols=59  Identities=34%  Similarity=0.462  Sum_probs=48.1

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 037676          196 EVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLK-EAVKELERKRVQ  254 (267)
Q Consensus       196 e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~-~~l~~L~~~~k~  254 (267)
                      +.-++++.+=+++||.+|-+||.|||.....|+.+...+..+|..|. .+++.|..+.++
T Consensus       280 ~~p~~~~~~~lern~~aas~~r~~~k~~~~~~~~~~~~~~~~n~~l~~~~~~~l~~~~~~  339 (395)
T KOG1414|consen  280 EDPDERRRRFLERNRAAASRCRQKKKVWVLSLEKKAEELSSENGQLLLNEVELLRNEVKQ  339 (395)
T ss_pred             CCchhhhhhhhhhhhhhhccccCCcccccccccccccchhhhhcccccchhhHHHhHHhh
Confidence            34455668889999999999999999999999999999999999998 555555444443

>PHA03162 hypothetical protein; Provisional

Probab=85.62  E-value=0.57  Score=40.15  Aligned_cols=41  Identities=32%  Similarity=0.400  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHH
Q 037676          219 RKQAYTVELELELTQLKAENDKLKEAVKE------------LERKRVQEDIQA  259 (267)
Q Consensus       219 RKk~y~~eLE~~v~~L~~EN~~L~~~l~~------------L~~~~k~~~~e~  259 (267)
                      +++.-+++|+.++.+|+.||..|++++..            |...+++.+|-.
T Consensus        10 k~~~tmEeLaaeL~kLqmENK~LKkkl~~~~~~~~~p~d~~LTp~qKea~I~s   62 (135)
T PHA03162         10 KAQPTMEDLAAEIAKLQLENKALKKKIKEGTDDDPLPGDPILTPAAKEAMIGA   62 (135)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHH
Confidence            35667899999999999999999999942            455566666543

>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation

Probab=81.45  E-value=2.6  Score=31.54  Aligned_cols=23  Identities=39%  Similarity=0.423  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 037676          222 AYTVELELELTQLKAENDKLKEA  244 (267)
Q Consensus       222 ~y~~eLE~~v~~L~~EN~~L~~~  244 (267)
                      ..+.+|+.++.+|+.||..||..
T Consensus        21 ~~I~eL~~~n~~Le~EN~~Lk~~   43 (59)
T PF01166_consen   21 EQIAELEERNSQLEEENNLLKQN   43 (59)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            45668888888888888888763

These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.

>PRK00888 ftsB cell division protein FtsB; Reviewed

Probab=80.95  E-value=4.8  Score=32.67  Aligned_cols=34  Identities=24%  Similarity=0.248  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          217 RARKQAYTVELELELTQLKAENDKLKEAVKELER  250 (267)
Q Consensus       217 R~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~  250 (267)
                      ..+.++.+.+++.++..|+.+|..|+++++.|..
T Consensus        29 ~~~l~~q~~~~~~e~~~l~~~n~~L~~eI~~L~~   62 (105)
T PRK00888         29 YWRVNDQVAAQQQTNAKLKARNDQLFAEIDDLKG   62 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            3456677888999999999999999999988865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	267
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	2e-15
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	4e-12
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	8e-11
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	8e-11
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	2e-10
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	5e-09
2wt7_B	90	Transcription factor MAFB; transcription, transcri	6e-09
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	5e-07
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	7e-07
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	1e-06
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	9e-05

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 68.2 bits (167), Expect = 2e-15
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQE 255
           +R+ R++KNRE+A  SR +K+ Y   LE  +  L+ +N  L E +K L+     +
Sbjct: 1   KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLYSHK 55

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 58.9 bits (143), Expect = 4e-12
 Identities = 15/54 (27%), Positives = 31/54 (57%)

Query: 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQ 254
           +R++ + +NR +A+RSR +++ +   LE +   L + N +L+  V  L  +  Q
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQ 54

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63

 Score = 55.6 bits (134), Expect = 8e-11
 Identities = 16/55 (29%), Positives = 32/55 (58%)

Query: 200 ERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQ 254
           E+R+ R  +N+ +AA+ R R++  T  L+ E  QL+ E   L+  +  L +++ +
Sbjct: 1   EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEK 55

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 15/50 (30%), Positives = 29/50 (58%)

Query: 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELER 250
           ++ ++M +N+ +A R R +K+A    L  E  +L+ +N+ LKE    L +
Sbjct: 2   KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAK 51

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62

 Score = 54.3 bits (131), Expect = 2e-10
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKRVQ 254
           + +R+ ++NR +A++SR RK      LE ++  LKA+N +L      L  +  Q
Sbjct: 1   KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQ 54

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107

 Score = 52.0 bits (124), Expect = 5e-09
 Identities = 17/67 (25%), Positives = 33/67 (49%)

Query: 186 NRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAV 245
           N+        E++  +++RR +KNR  AA  R ++     ELE +  +L+ E +KL    
Sbjct: 22  NQHLRGLSKEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASEN 81

Query: 246 KELERKR 252
             ++ + 
Sbjct: 82  ASMKLEL 88

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90

 Score = 51.1 bits (122), Expect = 6e-09
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 194 PHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR 252
             EV+  +++RR +KNR  A   R ++      LE E TQL  + ++LK+ V  L R+R
Sbjct: 20  KDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARER 78

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63

 Score = 45.2 bits (107), Expect = 5e-07
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 190 IIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELE 249
           I+    +    +R R    N E+A RSRARK     +LE ++ +L ++N  L+  V  L+
Sbjct: 2   IVPESSDPAALKRAR----NTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLK 57

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Length = 87

 Score = 45.4 bits (107), Expect = 7e-07
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)

Query: 184 KGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKE 243
           K   K+ +D   +    RR+R    N  +  +SR + +   +E + ++ +L AEN++L++
Sbjct: 2   KSKAKKTVDKHSDEYKIRRER----NNIAVRKSRDKAKMRNLETQHKVLELTAENERLQK 57

Query: 244 AVKELER 250
            V++L R
Sbjct: 58  KVEQLSR 64

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Length = 78

 Score = 44.1 bits (104), Expect = 1e-06
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)

Query: 184 KGNRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKE 243
           K   K+ +D   +    RR+R    N  +  +SR + +   +E + ++ +L AEN++L++
Sbjct: 2   KSKAKKTVDKHSDEYKIRRER----NNIAVRKSRDKAKMRNLETQHKVLELTAENERLQK 57

Query: 244 AVKELER 250
            V++L R
Sbjct: 58  KVEQLSR 64

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Length = 70

 Score = 38.9 bits (90), Expect = 9e-05
 Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 200 ERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK 251
           E   +R  +NR +    R RK+ +   LE ++  LK  +        +L +K
Sbjct: 7   EPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQK 58

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	267
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	99.59
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	99.39
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	99.3
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	99.23
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	99.2
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	98.93
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	98.63
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	98.57
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	98.31
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	98.31
2wt7_B	90	Transcription factor MAFB; transcription, transcri	98.06
2oqq_A	42	Transcription factor HY5; homodimer leucine zipper	96.37
1skn_P	92	DNA-binding domain of SKN-1; complex (transcriptio	96.14
2c9l_Y	63	EB1, zebra, BZLF1 trans-activator protein; viral p	92.11
1kd8_B	36	GABH BLL, GCN4 acid base heterodimer base-D12LA16L	90.3
2oxj_A	34	Hybrid alpha/beta peptide based on the GCN4-P1 Se	88.85
3m48_A	33	General control protein GCN4; leucine zipper, synt	88.75
2kz5_A	91	Transcription factor NF-E2 45 kDa subunit; structu	88.15
1kd8_A	36	GABH AIV, GCN4 acid base heterodimer acid-D12IA16V	87.12
1am9_A	82	Srebp-1A, protein (sterol regulatory element bindi	84.55
3c3f_A	34	Alpha/beta peptide with the GCN4-PLI SIDE chain S	84.34
3c3g_A	33	Alpha/beta peptide with the GCN4-PLI SIDE chain S	84.17
3s9g_A	104	Protein hexim1; cyclin T-binding domain (TBD), cyc	84.14
2oa5_A	110	Hypothetical protein BQLF2; MHR28B, NESG, structur	84.11
1nkp_B	83	MAX protein, MYC proto-oncogene protein; transcrip	83.96
1dip_A	78	Delta-sleep-inducing peptide immunoreactive peptid	83.14
2wuj_A	57	Septum site-determining protein diviva; bacterial	82.27
1gmj_A	84	ATPase inhibitor; coiled-coil structure, P depende	82.24
2oqq_A	42	Transcription factor HY5; homodimer leucine zipper	81.79
1uo4_A	34	General control protein GCN4; four helix bundle, c	80.85
2wq1_A	33	General control protein GCN4; TAA, nucleus, coiled	80.82
2bni_A	34	General control protein GCN4; four helix bundle, a	80.68

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=99.59  E-value=1.3e-15  Score=109.46  Aligned_cols=52  Identities=37%  Similarity=0.540  Sum_probs=48.9

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       201 rRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      |+++||++||+||++||.||++|+++||.+|..|+.||..|+.++..|.+.+
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~   52 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLY   52 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5889999999999999999999999999999999999999999999887653

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=99.39  E-value=1.1e-12  Score=96.11  Aligned_cols=53  Identities=30%  Similarity=0.471  Sum_probs=49.9

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          200 ERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       200 erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      |||++|+++||+||++||.||++|+.+||.+|..|+.+|..|+.++..|....
T Consensus         1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~   53 (63)
T 2wt7_A            1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEK   53 (63)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999887653

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=99.30  E-value=7.8e-12  Score=90.70  Aligned_cols=52  Identities=27%  Similarity=0.449  Sum_probs=49.2

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       201 rRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      ||++|+++||++|++||.||++|+.+||.+|..|+.+|..|..++..|..+.
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~   52 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEV   52 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999997663

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=99.23  E-value=1.4e-11  Score=90.59  Aligned_cols=51  Identities=31%  Similarity=0.361  Sum_probs=44.0

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          202 RQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       202 RqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      ..++..+||+||++||.||++|+.+||.+|..|+.+|..|..++..|.+..
T Consensus        10 ~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l   60 (63)
T 2dgc_A           10 AALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLV   60 (63)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334445599999999999999999999999999999999999998887653

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=99.20  E-value=5.2e-11  Score=86.67  Aligned_cols=52  Identities=31%  Similarity=0.456  Sum_probs=48.1

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       201 rRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      |+++|..+||+||++||.||++|+.+||.+|..|+.+|..|..++..|....
T Consensus         1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~   52 (62)
T 1jnm_A            1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQV   52 (62)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3578889999999999999999999999999999999999999999987653

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=98.93  E-value=2.1e-09  Score=78.72  Aligned_cols=51  Identities=29%  Similarity=0.457  Sum_probs=43.6

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          201 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       201 rRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      |+++++.+||.+|+|||.||++++.+|+.++..|+.+|..|+.+++.|+.+
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E   52 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKE   52 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999999999999999999765

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=98.63  E-value=1.1e-07  Score=72.63  Aligned_cols=57  Identities=23%  Similarity=0.363  Sum_probs=49.4

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          195 HEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       195 ~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      +++.++.-..|..+|.++|++||.+++....+++.++..|+.||..|+.++..|..+
T Consensus         9 ~dk~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E   65 (78)
T 1gu4_A            9 VDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRE   65 (78)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344445556668899999999999999999999999999999999999999988765

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=98.57  E-value=1.9e-07  Score=72.78  Aligned_cols=58  Identities=22%  Similarity=0.344  Sum_probs=50.7

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          195 HEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       195 ~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      +++.+++-..|..+|.++|++||.+++....+++.++..|+.||..|+.++..|..+.
T Consensus         9 ~dk~d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~   66 (87)
T 1hjb_A            9 VDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSREL   66 (87)
T ss_dssp             -CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4445556677788999999999999999999999999999999999999999987653

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=98.31  E-value=2.7e-06  Score=63.79  Aligned_cols=48  Identities=23%  Similarity=0.270  Sum_probs=40.1

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          203 QRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELER  250 (267)
Q Consensus       203 qrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~  250 (267)
                      .+|...||.|++..|.||++|+.+||.+|..|+.+|..|..+...|..
T Consensus        10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~   57 (70)
T 1gd2_E           10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQ   57 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578899999999999999999999999999998766666665555543

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=98.31  E-value=8.3e-08  Score=77.40  Aligned_cols=55  Identities=31%  Similarity=0.459  Sum_probs=43.8

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Q 037676          195 HEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQ-------LKAENDKLKEAVKELE  249 (267)
Q Consensus       195 ~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~-------L~~EN~~L~~~l~~L~  249 (267)
                      .+....|.+||..|||.+|+.||.||.+.+++||.++..       |..||..|+.++..+.
T Consensus        31 ~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En~~l~~E~~~lk   92 (107)
T 3a5t_A           31 EEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALR   92 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTTSHHHHTTTSSS
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456778999999999999999999999999999976654       5556666665554443

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A

Probab=98.06  E-value=2.8e-05  Score=61.00  Aligned_cols=56  Identities=36%  Similarity=0.449  Sum_probs=47.5

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          195 HEVVVERRQRRMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKELER  250 (267)
Q Consensus       195 ~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~L~~  250 (267)
                      -+....|..||-.|||..|+-||.||.....+||.++..|..+-..|++++..+..
T Consensus        21 eev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~   76 (90)
T 2wt7_B           21 DEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLAR   76 (90)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45677889999999999999999999999999999988877777777777666643

>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}

Probab=96.37  E-value=0.0047  Score=42.11  Aligned_cols=31  Identities=32%  Similarity=0.520  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          221 QAYTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       221 k~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      |+|+.+||.++..|+..|.+|..++..|+.+
T Consensus         2 KaYl~eLE~r~k~le~~naeLEervstLq~E   32 (42)
T 2oqq_A            2 SAYLSELENRVKDLENKNSELEERLSTLQNE   32 (42)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999998754

>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1

Probab=96.14  E-value=0.0028  Score=49.76  Aligned_cols=35  Identities=23%  Similarity=0.224  Sum_probs=29.6

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 037676          195 HEVVVERRQRRMIKNRESAARSRARKQAYTVELEL  229 (267)
Q Consensus       195 ~e~~~erRqrR~ikNReSA~rSR~RKk~y~~eLE~  229 (267)
                      ......|..||..|||.+|++||+||.+.+.+|+.
T Consensus        56 ~Ql~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~   90 (92)
T 1skn_P           56 YQRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH   90 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence            44667899999999999999999999999888764

>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y

Probab=92.11  E-value=0.83  Score=32.96  Aligned_cols=43  Identities=28%  Similarity=0.323  Sum_probs=32.6

Q ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          205 RMIKNRESAARSRARKQAYTVELELELTQLKAENDKLKEAVKE  247 (267)
Q Consensus       205 R~ikNReSA~rSR~RKk~y~~eLE~~v~~L~~EN~~L~~~l~~  247 (267)
                      ..-|||.++++||+|=+..++-.-.-...-..||.+|+--+++
T Consensus         5 kryknr~asrk~rakfkn~lqh~r~vaaaks~en~rlr~l~kq   47 (63)
T 2c9l_Y            5 KRYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRLLLKQ   47 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Confidence            4468999999999998887766655555667889988865543

>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B

Probab=90.30  E-value=0.52  Score=31.04  Aligned_cols=30  Identities=27%  Similarity=0.345  Sum_probs=26.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          223 YTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      .+..||.+|+.|-.+|..|..++..|.+..
T Consensus         2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~ll   31 (36)
T 1kd8_B            2 KVKQLKAKVEELKSKLWHLKNKVARLKKKN   31 (36)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            477899999999999999999988887654

>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*

Probab=88.85  E-value=0.68  Score=30.15  Aligned_cols=29  Identities=24%  Similarity=0.310  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          223 YTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      .+..||.+|..|-.+|..|..+...|...
T Consensus         2 RMnQLE~kVEeLl~~n~~Le~eV~rLk~l   30 (34)
T 2oxj_A            2 RMXQLEXKVXELLXKNXHLEXEVXRLKXL   30 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            47889999999999999999998887654

>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A

Probab=88.75  E-value=0.5  Score=30.62  Aligned_cols=28  Identities=25%  Similarity=0.372  Sum_probs=24.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          224 TVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       224 ~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      +..||.+|..|-.+|..|..++..|...
T Consensus         2 M~QLE~kVEeLl~~n~~Le~EV~RLk~L   29 (33)
T 3m48_A            2 MAQLEAKVEELLSKNWNLENEVARLKKL   29 (33)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            5689999999999999999998887654

>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=88.15  E-value=0.048  Score=42.73  Aligned_cols=29  Identities=31%  Similarity=0.330  Sum_probs=24.6

Q ss_pred             ChhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 037676          194 PHEVVVERRQRRMIKNRESAARSRARKQA  222 (267)
Q Consensus       194 ~~e~~~erRqrR~ikNReSA~rSR~RKk~  222 (267)
                      +.+....|..||.-|||.+|++||+||..
T Consensus        59 ~~Ql~lIrdiRRRgKNKvAAqnCRKRKld   87 (91)
T 2kz5_A           59 ESQLALVRDIRRRGKNKVAAQNYRKRKLE   87 (91)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCCCCC
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            34566789999999999999999999854

>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A

Probab=87.12  E-value=0.8  Score=30.16  Aligned_cols=30  Identities=27%  Similarity=0.378  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          223 YTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      .+..||.+|..|..+|..|..++..|+...
T Consensus         2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~ll   31 (36)
T 1kd8_A            2 EVKQLEAEVEEIESEVWHLENEVARLEKEN   31 (36)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence            357899999999999999999888886653

>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C

Probab=84.55  E-value=1.5  Score=32.82  Aligned_cols=30  Identities=30%  Similarity=0.279  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          220 KQAYTVELELELTQLKAENDKLKEAVKELE  249 (267)
Q Consensus       220 Kk~y~~eLE~~v~~L~~EN~~L~~~l~~L~  249 (267)
                      --+|+..|+.++..|++||..|+.++++..
T Consensus        48 Ai~YI~~Lq~~~~~L~~e~~~L~~~~~~~~   77 (82)
T 1am9_A           48 AIDYIRFLQHSNQKLKQENLSLRTAVHKSK   77 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            347999999999999999999998876653

>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1

Probab=84.34  E-value=1.7  Score=28.29  Aligned_cols=29  Identities=7%  Similarity=0.158  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          223 YTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      .+..||.+|..|-.+|..|..++..|...
T Consensus         2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~l   30 (34)
T 3c3f_A            2 RMXQIEXKLEXILSXLYHXENEXARIXKL   30 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            47889999999999999999998887654

>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*

Probab=84.17  E-value=2.3  Score=27.46  Aligned_cols=28  Identities=7%  Similarity=0.168  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          224 TVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       224 ~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      +..||.+|+.|-.+|..|..++..|...
T Consensus         2 MnQLEdKvEeLl~~~~~Le~EV~RLk~l   29 (33)
T 3c3g_A            2 MKXIEXKLXEIXSKXYHXENXLARIKXL   29 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            6789999999999999999998887654

>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A

Probab=84.14  E-value=6  Score=31.48  Aligned_cols=28  Identities=43%  Similarity=0.405  Sum_probs=23.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          221 QAYTVELELELTQLKAENDKLKEAVKEL  248 (267)
Q Consensus       221 k~y~~eLE~~v~~L~~EN~~L~~~l~~L  248 (267)
                      -+.+.+|+.+|..|..||..|.++.+..
T Consensus        64 ~~~v~eLe~everL~~ENq~L~~e~~~~   91 (104)
T 3s9g_A           64 DARVRELELELDRLRAENLQLLTENELH   91 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4678899999999999999999875433

>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*

Probab=84.11  E-value=0.58  Score=37.76  Aligned_cols=25  Identities=40%  Similarity=0.438  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          223 YTVELELELTQLKAENDKLKEAVKE  247 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~  247 (267)
                      -+++|+.++.+|+-||..|++++..
T Consensus         9 t~EeLaaeL~kLqmENK~LKkkl~~   33 (110)
T 2oa5_A            9 TYEEMVKEVERLKLENKTLKQKVKS   33 (110)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4789999999999999999999873

>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B

Probab=83.96  E-value=2  Score=31.79  Aligned_cols=32  Identities=19%  Similarity=0.179  Sum_probs=26.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          221 QAYTVELELELTQLKAENDKLKEAVKELERKR  252 (267)
Q Consensus       221 k~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~~  252 (267)
                      -.|+..|+.++..|+.+...|++++..|+...
T Consensus        46 i~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l   77 (83)
T 1nkp_B           46 TEYIQYMRRKNHTHQQDIDDLKRQNALLEQQV   77 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56999999999999888888888888776553

>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1

Probab=83.14  E-value=1.2  Score=33.71  Aligned_cols=23  Identities=35%  Similarity=0.284  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 037676          221 QAYTVELELELTQLKAENDKLKE  243 (267)
Q Consensus       221 k~y~~eLE~~v~~L~~EN~~L~~  243 (267)
                      |+.+.+|+.++.+|+.||.-||.
T Consensus        21 Ke~I~EL~e~~~qLE~EN~~Lk~   43 (78)
T 1dip_A           21 KEQIRELVEKNSQLERENTLLKT   43 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            45677999999999999998886

>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A

Probab=82.27  E-value=1.3  Score=31.17  Aligned_cols=30  Identities=13%  Similarity=0.347  Sum_probs=24.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          222 AYTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       222 ~y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      +|++.+...+..|..||..|+.+++.|+++
T Consensus        27 ~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~   56 (57)
T 2wuj_A           27 EFLAQVRKDYEIVLRKKTELEAKVNELDER   56 (57)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            688899999999999999999999888654

>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A

Probab=82.24  E-value=8.4  Score=29.63  Aligned_cols=65  Identities=17%  Similarity=0.249  Sum_probs=36.8

Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          186 NRKRIIDGPHEVVVERRQRRMIKNRESAARSRARKQ--AYTVELELELTQLKAENDKLKEAVKELER  250 (267)
Q Consensus       186 grk~~~~~~~e~~~erRqrR~ikNReSA~rSR~RKk--~y~~eLE~~v~~L~~EN~~L~~~l~~L~~  250 (267)
                      |+-|-..+..-+.+.-++-+-++.++.++....|++  .-+..-..++..|+++..+++..+.+|..
T Consensus        13 gsir~aggaFgKrEaA~Ee~YfrqkekEqL~~LKkkl~~el~~h~~ei~~le~~i~rhk~~i~~l~~   79 (84)
T 1gmj_A           13 GAVRDAGGAFGKREQAEEERYFRARAKEQLAALKKHKENEISHHAKEIERLQKEIERHKQSIKKLKQ   79 (84)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccccCCCcccHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            444444555666666666666666776666666665  33344444566677777777777776654

>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}

Probab=81.79  E-value=3.2  Score=28.20  Aligned_cols=25  Identities=36%  Similarity=0.465  Sum_probs=20.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          222 AYTVELELELTQLKAENDKLKEAVK  246 (267)
Q Consensus       222 ~y~~eLE~~v~~L~~EN~~L~~~l~  246 (267)
                      ....+||.+|+.|+.||.-|++-++
T Consensus        17 ~~naeLEervstLq~EN~mLRqvl~   41 (42)
T 2oqq_A           17 NKNSELEERLSTLQNENQMLRHILK   41 (42)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHhc
Confidence            3467899999999999999887653

>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*

Probab=80.85  E-value=2.1  Score=27.84  Aligned_cols=29  Identities=3%  Similarity=0.088  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          223 YTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      .+..||.+|+.|-.+|..|..++..|.+.
T Consensus         2 RM~QLEdKVEeLl~~n~~Le~EV~RLk~L   30 (34)
T 1uo4_A            2 RMKQIEDKGEEILSKLYHIENELARIKKL   30 (34)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            36789999999999999999988877653

>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...

Probab=80.82  E-value=3.7  Score=26.51  Aligned_cols=28  Identities=7%  Similarity=0.022  Sum_probs=24.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          224 TVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       224 ~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      +..||.+|+.|-.+|..|..++..|.+.
T Consensus         2 MnQLEdKVEell~~~~~le~EV~Rl~~l   29 (33)
T 2wq1_A            2 MKQLEDKIEENTSKIYHNTNEIARNTKL   29 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            6789999999999999999988877654

>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...

Probab=80.68  E-value=2.4  Score=27.63  Aligned_cols=29  Identities=7%  Similarity=0.215  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          223 YTVELELELTQLKAENDKLKEAVKELERK  251 (267)
Q Consensus       223 y~~eLE~~v~~L~~EN~~L~~~l~~L~~~  251 (267)
                      .+..||.+|..|-.+|..|..++..|.+.
T Consensus         2 RMnQLEdKvEeLl~~~~~L~~EV~RLk~l   30 (34)
T 2bni_A            2 RMKQIEDKLEEILSKGHHICNELARIKKL   30 (34)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence            46789999999999999999998887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	267
d1sknp_	74	Skn-1 {Caenorhabditis elegans [TaxId: 6239]}	91.67
d2oa5a1	96	Uncharacterized protein BQLF2 {Murid herpesvirus 4	85.35
d1uklc_	61	SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}	82.59

>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: A DNA-binding domain in eukaryotic transcription factors
superfamily: A DNA-binding domain in eukaryotic transcription factors
family: A DNA-binding domain in eukaryotic transcription factors
domain: Skn-1
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.67  E-value=0.037  Score=40.02  Aligned_cols=31  Identities=26%  Similarity=0.264  Sum_probs=25.9

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 037676          196 EVVVERRQRRMIKNRESAARSRARKQAYTVE  226 (267)
Q Consensus       196 e~~~erRqrR~ikNReSA~rSR~RKk~y~~e  226 (267)
                      .....+-.||.=||+.+|+.||+||-...++
T Consensus        43 Ql~lirDIRRRGKNKvAAqnCRKRKld~~d~   73 (74)
T d1sknp_          43 QRQLIRKIRRRGKNKVAARTCRQRRTDRHDK   73 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHhhhhhhcc
Confidence            3556788999999999999999999876543

>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}

class: Alpha and beta proteins (a+b)
fold: BLRF2-like
superfamily: BLRF2-like
family: BLRF2-like
domain: Uncharacterized protein BQLF2
species: Murid herpesvirus 4 [TaxId: 33708]

Probab=85.35  E-value=0.25  Score=37.13  Aligned_cols=24  Identities=42%  Similarity=0.483  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          224 TVELELELTQLKAENDKLKEAVKE  247 (267)
Q Consensus       224 ~~eLE~~v~~L~~EN~~L~~~l~~  247 (267)
                      +++|+.++.+|+-||..|++++..
T Consensus         4 ~EeLaaeL~rL~~ENk~LKkkl~~   27 (96)
T d2oa5a1           4 YEEMVKEVERLKLENKTLKQKVKS   27 (96)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            689999999999999999999876

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.59  E-value=0.77  Score=30.81  Aligned_cols=25  Identities=32%  Similarity=0.244  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037676          222 AYTVELELELTQLKAENDKLKEAVK  246 (267)
Q Consensus       222 ~y~~eLE~~v~~L~~EN~~L~~~l~  246 (267)
                      +|+..|+.++..|++|+..|+....
T Consensus        33 ~YI~~Lq~~~~~L~~e~~~L~~~~~   57 (61)
T d1uklc_          33 DYIKYLQQVNHKLRQENMVLKLANQ   57 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999988654