Citrus Sinensis ID: 037682

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
Protein Sequence
MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLDAGLGSRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEcccEEEEcccHHHHHHHHHccccccccccHHHccccccccccccccccccccccccccccccccHHccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHcccHHHHHHHHHHcccccHccccccccHHHHHHHHHHHHHccccEEEEcccEEcccccccccccEEEEEcccEEEEcccHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHccccccEEEEEHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvdvdrrmtglnpahIAGLRRLsaraaapttatslpvrnglvsfSSLADKVITHLKnsgirvqpglsdaEFARAEaefgfvfppDLRAILsaglplgpgfpdwratgsaRLHLRASLDLPIAAITFQIARNAlwskswgprpsdpEKALRVARNALkrapllipifnhcyipcnptlagnpifyvdenrifccgldlsdffereslfrstesdpqvlIKQRsvsertagsssnfsrrsldaglgsrtprwvefwsdaaidrrrrnssssssssperffdmprseipkwvDDYMGQIGSVlreggwsepdiVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESlrksgwsseevsdafgfdfrpekerkpakklSPELVERIGKLAESVSRS
Flexible Loop (DISEMBL)
mvdvdrrmtglnpahIAGLRRLSARAAAPttatslpvrnglVSFSSLADKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESLfrstesdpqvlikqrsvsertagsssnfsrrsldaglgsrtprwvefwsdaaidrrrrnssssssssperffdmprseipKWVDDYMGQIGSVLreggwsepDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESlrksgwsseevsdafgfdfrpekerkpakklspelverigklaesvsrs
Low Complexity Region (SEG)
MVDVDRRMTGLNPAHIAGlrrlsaraaapttatslpVRNGLVSFSSLADKVITHLKNSGIRVQPGLSDaefaraeaefgfvfPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLDAGLGSRTPRWVEFWSDAAIDrrrrnssssssssPERFFDMPRSEIPKWVDDYMGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS
Disordered region (IsUnstruct)
********************************TSLPVRNGLVSFSSLADKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWG*********LRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESL******************************************RWVEFWSD****************************IPKWVDDYMGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKA*******************************************************
Disordered Region (DISOPRED)
****D**MTGLNPAHIAGL**************************SLADKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESLF****************************************PRWVEFW********************************KWVDDYMGQIGSVLREGGWSEPDIVE******************NQSVLDGLLLKADRLSESLRKSGWSSEEVSDAFGFDF***************LVERIGKLAESV***
Disordered Region (DISEMBL)
MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQ**************SRRSLDAGLGSRTPRWVEFWSDAAI******************FDMPRSEIPKWVDDYMGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSE***********VSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS
Disordered Region (DISPRO)
****************************************LVSFSSLADKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESLFRS*****************************LDAGLGSRTPRWVEFWSDAAIDR*********************SEIPKWVDDYMGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSR*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNPIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLDAGLGSRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
225438716	397	PREDICTED: uncharacterized protein LOC10	0.992	0.992	0.88	0.0
255565188	398	conserved hypothetical protein [Ricinus	0.989	0.987	0.855	0.0
224096758	399	predicted protein [Populus trichocarpa]	0.994	0.989	0.815	0.0
224081647	399	predicted protein [Populus trichocarpa]	0.994	0.989	0.81	0.0
356496892	406	PREDICTED: uncharacterized protein LOC10	0.984	0.963	0.803	1e-173
449448320	393	PREDICTED: uncharacterized protein LOC10	0.987	0.997	0.793	1e-169
357482915	395	hypothetical protein MTR_5g017410 [Medic	0.989	0.994	0.795	1e-169
356537591	412	PREDICTED: uncharacterized protein LOC10	0.984	0.949	0.780	1e-166
15240167	394	uncharacterized protein [Arabidopsis tha	0.987	0.994	0.754	1e-165
449463975	393	PREDICTED: uncharacterized protein LOC10	0.987	0.997	0.761	1e-163

>gi|225438716|ref|XP_002282505.1| PREDICTED: uncharacterized protein LOC100262755 [Vitis vinifera]

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/400 (88%), Positives = 378/400 (94%), Gaps = 6/400 (1%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTT-ATSLPVRNGLVSFSSLADKVITHLKNSG 59
           MVDVDRRMTGLNPAHIAGLRRLSARAAAP+T +T+LPVRNGL+SF++LADKVI HL+NSG
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPSTVSTALPVRNGLISFTTLADKVIAHLQNSG 60

Query: 60  IRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDL 119
           I+VQ GLSDAEFARAEAEFGF FPPDL+A+LSAGLP+GPGFPDWRA G ARL LRASLDL
Sbjct: 61  IQVQAGLSDAEFARAEAEFGFAFPPDLKAVLSAGLPVGPGFPDWRAAG-ARLRLRASLDL 119

Query: 120 PIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAG 179
           PIAAI+FQIARN+LWSKSWGPRPSDPEKALR+ARNALKRAPLLIPIFNHCYIPCNP+LAG
Sbjct: 120 PIAAISFQIARNSLWSKSWGPRPSDPEKALRIARNALKRAPLLIPIFNHCYIPCNPSLAG 179

Query: 180 NPIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSL 239
           NPIF+VDENRIFCCGLDLSDFFERESLF+S  SDPQVL KQRSVSE+TAGSSSNFSRRSL
Sbjct: 180 NPIFFVDENRIFCCGLDLSDFFERESLFQS--SDPQVLKKQRSVSEKTAGSSSNFSRRSL 237

Query: 240 DAG--LGSRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQIG 297
           D G   G RTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVD+Y+ QIG
Sbjct: 238 DTGGLAGGRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVDEYIEQIG 297

Query: 298 SVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSE 357
           SVLREGGW E DI EIVTVSASGFFEGEMV+LDNQ+VLD LLLKADR S+SLRK+GWSSE
Sbjct: 298 SVLREGGWDESDIAEIVTVSASGFFEGEMVLLDNQAVLDALLLKADRFSDSLRKAGWSSE 357

Query: 358 EVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
           EVSDA GFD+RPEKERKPAKKL+PELVERIGKLAESVSRS
Sbjct: 358 EVSDALGFDYRPEKERKPAKKLAPELVERIGKLAESVSRS 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565188|ref|XP_002523586.1| conserved hypothetical protein [Ricinus communis] gi|223537148|gb|EEF38781.1| conserved hypothetical protein [Ricinus communis]

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/402 (85%), Positives = 372/402 (92%), Gaps = 9/402 (2%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRMTGLNPAHIAGLRRLSARAAAP+TA   PVRNGLVSFSSLADKVITHL+NS I
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPSTA---PVRNGLVSFSSLADKVITHLRNSAI 57

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
           +VQPGLSD EFARAEAEFGF FPPDLRA+LSAGLP+GPGFPDWR+TG ARLHLRASLDLP
Sbjct: 58  QVQPGLSDVEFARAEAEFGFAFPPDLRAVLSAGLPVGPGFPDWRSTG-ARLHLRASLDLP 116

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI+FQIARN LWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPC+P+LAGN
Sbjct: 117 IAAISFQIARNTLWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCHPSLAGN 176

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLD 240
           PIF+VDENRIFCCGLDLSDFF+RESLFRS+ESDP +L KQRSVSE++AGSS+N+SRRSLD
Sbjct: 177 PIFFVDENRIFCCGLDLSDFFDRESLFRSSESDPVILKKQRSVSEKSAGSSTNYSRRSLD 236

Query: 241 AGL--GSRTPRWVEFWSDAAID--RRRRNSSSSSSSSPERFFDM-PRSEIPKWVDDYMGQ 295
            G+  GSRTPRWVEFWSDAA+D  RR   SSSS SSSPERFFDM PRSE+P WV++Y+ Q
Sbjct: 237 TGIAFGSRTPRWVEFWSDAAVDRRRRNSASSSSESSSPERFFDMPPRSEMPTWVNEYIEQ 296

Query: 296 IGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWS 355
           IGSVLREGGWSE DI EIV VSASGFFEGEMVMLDNQ+V D LLLKADR S+SLRK+GWS
Sbjct: 297 IGSVLREGGWSETDISEIVHVSASGFFEGEMVMLDNQAVRDALLLKADRFSDSLRKAGWS 356

Query: 356 SEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
           SEEVSDA GFDFRPEKERKP KKLSPEL+E+IGKLAESVSRS
Sbjct: 357 SEEVSDALGFDFRPEKERKPVKKLSPELIEKIGKLAESVSRS 398

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096758|ref|XP_002310724.1| predicted protein [Populus trichocarpa] gi|222853627|gb|EEE91174.1| predicted protein [Populus trichocarpa]

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/400 (81%), Positives = 363/400 (90%), Gaps = 5/400 (1%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRMTGLNP HIAGLRRLSARAAAP+T T+LP RN L+SFSSLADKVITHL++SGI
Sbjct: 1   MVDVDRRMTGLNPGHIAGLRRLSARAAAPSTTTTLPPRNSLLSFSSLADKVITHLRSSGI 60

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
           +VQPGL+++EFAR+EAEFGF FPPDLRA+LSAGLP+GPGFPDWR+ G ARLHLRASLDLP
Sbjct: 61  QVQPGLTESEFARSEAEFGFAFPPDLRAVLSAGLPVGPGFPDWRSAG-ARLHLRASLDLP 119

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI FQIARN LWSKSWGPRPSDPEKALRVARN+LKRAPLLIPIFNHCYIPC P+LAGN
Sbjct: 120 IAAICFQIARNTLWSKSWGPRPSDPEKALRVARNSLKRAPLLIPIFNHCYIPCQPSLAGN 179

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLD 240
           PIF++DE+RIFCCGLDLSDFF+RESLFRS+ES P ++ KQ+SVSE++ G S+N SR+SLD
Sbjct: 180 PIFFIDESRIFCCGLDLSDFFDRESLFRSSESHPIIIKKQKSVSEKSTGLSNNLSRKSLD 239

Query: 241 AGL--GSRTPRWVEFWSDAAID--RRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQI 296
            GL  GSRTPRWVEFWSDAA+D  RR   SSSS SSSPERFF+M RSEIPKWV DY+ +I
Sbjct: 240 TGLVNGSRTPRWVEFWSDAAVDRRRRNSASSSSGSSSPERFFEMRRSEIPKWVGDYIEKI 299

Query: 297 GSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSS 356
           GSVLREGGW E DI E+V VSASGFFEGEMV+LDNQ+VLD LLLK DR S+SLRK+GWSS
Sbjct: 300 GSVLREGGWKESDIEEMVEVSASGFFEGEMVILDNQAVLDALLLKVDRFSDSLRKAGWSS 359

Query: 357 EEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSR 396
           EEVSDA GFDFRPEKERKP KKLSPELVE+IGKLAESVSR
Sbjct: 360 EEVSDALGFDFRPEKERKPVKKLSPELVEKIGKLAESVSR 399

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081647|ref|XP_002306469.1| predicted protein [Populus trichocarpa] gi|222855918|gb|EEE93465.1| predicted protein [Populus trichocarpa]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/400 (81%), Positives = 360/400 (90%), Gaps = 5/400 (1%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRMTGLNPAHIAGLRRLSARAAAP+T T+LP RN L+SFSSLADKVITHL+NSGI
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPSTTTTLPARNSLLSFSSLADKVITHLRNSGI 60

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
           +VQPGL+D+EFAR+EAEFGF FPPDL A+LSAGLP+G GFPDWR+ G ARLHLRASLDLP
Sbjct: 61  QVQPGLTDSEFARSEAEFGFAFPPDLHAVLSAGLPVGAGFPDWRSAG-ARLHLRASLDLP 119

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI FQIARN LWSKSWGPRPSDPEKALR+ARN+LKRAPLLIPIFNHCYIPC P+LAGN
Sbjct: 120 IAAICFQIARNTLWSKSWGPRPSDPEKALRIARNSLKRAPLLIPIFNHCYIPCQPSLAGN 179

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLD 240
           PIF+VDENRIFCCGLDLSDFF+RE LFRS++SDP ++ KQ+SVSE++ G S+N SR+SLD
Sbjct: 180 PIFFVDENRIFCCGLDLSDFFDREYLFRSSKSDPIIIKKQKSVSEKSTGLSNNPSRKSLD 239

Query: 241 AGL--GSRTPRWVEFWSDAAID--RRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQI 296
            GL  GSRTPRWVEFWSDA +D  RR   SSSS SSSPERFF+MPRSEIP+WV DY+ QI
Sbjct: 240 TGLVNGSRTPRWVEFWSDAVVDRRRRNSASSSSGSSSPERFFEMPRSEIPRWVGDYIQQI 299

Query: 297 GSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSS 356
           GSVLREGGW E DI E+V VSASGFFEGEMV+LDNQ++LD LLLK DR S+SLRK+GWSS
Sbjct: 300 GSVLREGGWRESDIDEMVQVSASGFFEGEMVILDNQAILDALLLKVDRFSDSLRKAGWSS 359

Query: 357 EEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSR 396
           EEVSDA GFDFR EKERKP K LSPELVE+IGKLAESVSR
Sbjct: 360 EEVSDALGFDFRAEKERKPVKTLSPELVEKIGKLAESVSR 399

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496892|ref|XP_003517299.1| PREDICTED: uncharacterized protein LOC100793662 [Glycine max]

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 323/402 (80%), Positives = 366/402 (91%), Gaps = 11/402 (2%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRMTGLNPAHIAGLRRLSARA+A   A S+PVRNG+VSF+SLADKVI HL++SGI
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARASA---APSVPVRNGVVSFASLADKVINHLRDSGI 57

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
            VQ GLSD EFARAEAEFGFVFPPDLRA+L+AGLP+GPGFPDWR +G ARLHLRASLDLP
Sbjct: 58  HVQHGLSDTEFARAEAEFGFVFPPDLRAVLAAGLPVGPGFPDWR-SGGARLHLRASLDLP 116

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI+FQIARNA+WSKSWGPRP +PEKALRVARNALKRAPLLIPIFNHCYIP NP+LAGN
Sbjct: 117 IAAISFQIARNAVWSKSWGPRPCEPEKALRVARNALKRAPLLIPIFNHCYIPSNPSLAGN 176

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSS--SNFSRRS 238
           PIF+VDENRIFCCGLDLSDFF+RESLFRS+E+DP +L KQRSVSE++ G S  + FSRRS
Sbjct: 177 PIFFVDENRIFCCGLDLSDFFDRESLFRSSEADPILLKKQRSVSEKSTGVSVSAAFSRRS 236

Query: 239 LDAGLGSRTPRWVEFWSDAAIDRRRRN---SSSSSSSSPERFFDMPRSEIPKWVDDYMGQ 295
           LD+G  +RTPRWVEFWSDAA D+RRRN   SS S+SSSPERFF+MPRS++P WV++Y+GQ
Sbjct: 237 LDSG--TRTPRWVEFWSDAATDKRRRNSSSSSLSASSSPERFFEMPRSKVPGWVEEYIGQ 294

Query: 296 IGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWS 355
           IGSVL+ GGWSE DI E+V VSASGFFEGEMV+LDNQ++LD LLLKAD+ S+SLRK+GWS
Sbjct: 295 IGSVLKAGGWSESDINEMVEVSASGFFEGEMVVLDNQALLDALLLKADKFSDSLRKAGWS 354

Query: 356 SEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
           SEEVS+A GFDFRPEKERKPAKKLSP+L ERI KLA+SVSRS
Sbjct: 355 SEEVSEALGFDFRPEKERKPAKKLSPQLAERIEKLAQSVSRS 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448320|ref|XP_004141914.1| PREDICTED: uncharacterized protein LOC101216316 [Cucumis sativus] gi|449516621|ref|XP_004165345.1| PREDICTED: uncharacterized protein LOC101228801 [Cucumis sativus]

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 316/398 (79%), Positives = 350/398 (87%), Gaps = 6/398 (1%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRM GLNPAHIAGLRRLSARAAA T   S P R GL+SFSSLAD VITHL+N+G+
Sbjct: 1   MVDVDRRMAGLNPAHIAGLRRLSARAAAVTP--SHPSRAGLLSFSSLADNVITHLRNTGV 58

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
            VQ GLS A+FARAEAEFGFVFPPDLRA+LSAGLP+GPGFPDWR++G AR HLRA+LDLP
Sbjct: 59  EVQTGLSIADFARAEAEFGFVFPPDLRAVLSAGLPIGPGFPDWRSSG-ARQHLRATLDLP 117

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI+FQIA+N  WSKSWGPRP DPEKALRVARNALKRAPLLIP+FNHCYIPCNP+LAGN
Sbjct: 118 IAAISFQIAKNTFWSKSWGPRPLDPEKALRVARNALKRAPLLIPLFNHCYIPCNPSLAGN 177

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLD 240
           PIF VDENRI   GLDLSDFFERE LFRS++SD   L KQRS+SE++AGSSSNFSRRSLD
Sbjct: 178 PIFSVDENRISFSGLDLSDFFEREFLFRSSQSDAHHLKKQRSISEKSAGSSSNFSRRSLD 237

Query: 241 AGLGSRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQIGSVL 300
              G+RTPRWVEFWSDA +DRRRRNSSSSSSSSP+R  +MPRS IPKWV++Y+ +IGS L
Sbjct: 238 T--GARTPRWVEFWSDAVVDRRRRNSSSSSSSSPDRVIEMPRSGIPKWVNEYIEEIGSTL 295

Query: 301 REGGWSEPDIVEIVTVSASGFFEG-EMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEEV 359
           REGGWSE DI EIV VSASGFFEG  MV++DNQ+VLD LLLK DR S+ LRK+GWSSEEV
Sbjct: 296 REGGWSETDITEIVQVSASGFFEGAAMVLVDNQAVLDALLLKTDRFSDVLRKAGWSSEEV 355

Query: 360 SDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
           S A GFD R E+ERKPAKKLSPELVERIGKLAESV+RS
Sbjct: 356 SYALGFDHRAERERKPAKKLSPELVERIGKLAESVTRS 393

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482915|ref|XP_003611744.1| hypothetical protein MTR_5g017410 [Medicago truncatula] gi|355513079|gb|AES94702.1| hypothetical protein MTR_5g017410 [Medicago truncatula]

 Score =  599 bits (1544), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 316/397 (79%), Positives = 358/397 (90%), Gaps = 4/397 (1%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRMTGLNPAHIAGLRRLSARAA+ +T++S   RN L SFSS+ DKVIT L NSG+
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAASSSTSSSSSERNCLFSFSSVVDKVITQLHNSGV 60

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
           +VQPGLSDAEFARAEAEF FVFPPDLRAIL+AG+P+GPGFPDWR+T +ARL LRASLDLP
Sbjct: 61  QVQPGLSDAEFARAEAEFSFVFPPDLRAILAAGIPVGPGFPDWRST-AARLRLRASLDLP 119

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI+FQIARNA WSKSWG RPS+PEKAL++ARNALK+APLLIPIFNHCYIP NP+LAGN
Sbjct: 120 IAAISFQIARNAFWSKSWGLRPSEPEKALKIARNALKKAPLLIPIFNHCYIPSNPSLAGN 179

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLD 240
           PIFYVDENRIFCCG DLSDFF+RESLFR +ESDP++L+KQRSVSE++AGSS+ FSRRSLD
Sbjct: 180 PIFYVDENRIFCCGFDLSDFFQRESLFRRSESDPKILMKQRSVSEKSAGSSTAFSRRSLD 239

Query: 241 AGLGSRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDM-PRSEIPKWVDDYMGQIGSV 299
              G RTPRWVEFW++AA DRRRRNS SS S+SPERFFD+ PRS IP WVD+Y+ +IGSV
Sbjct: 240 T--GGRTPRWVEFWTEAATDRRRRNSLSSESTSPERFFDIPPRSVIPGWVDEYIDKIGSV 297

Query: 300 LREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEEV 359
           L+ GGWSEPDI E+V VSA GFFEGEMVMLDNQ++LD LLLKADR S+SLRK+GWSSEEV
Sbjct: 298 LKAGGWSEPDITEMVQVSACGFFEGEMVMLDNQALLDALLLKADRFSDSLRKAGWSSEEV 357

Query: 360 SDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSR 396
           S+A GFDFRPEKERKP KKLSPELVE+I KLA+SVS 
Sbjct: 358 SEALGFDFRPEKERKPVKKLSPELVEKIEKLAQSVSH 394

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537591|ref|XP_003537310.1| PREDICTED: uncharacterized protein LOC100776346 [Glycine max]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 316/405 (78%), Positives = 359/405 (88%), Gaps = 14/405 (3%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRMTGLNPAHIAGL      +A    A S+PVRNG+VSF+SLADKVI HL++SGI
Sbjct: 1   MVDVDRRMTGLNPAHIAGL---RRLSARAAAAPSVPVRNGVVSFASLADKVINHLRDSGI 57

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
            VQ GLSDAEFARAEAEFGFVFPPDLRA+L+AGLP+GPGFPDWR +G ARLHLRASLDLP
Sbjct: 58  HVQHGLSDAEFARAEAEFGFVFPPDLRAVLAAGLPVGPGFPDWR-SGGARLHLRASLDLP 116

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI+FQIARNA+WSKSWGPRP +PEKALRVARNALKRAPLLIPIFNHCYIP NP+LAGN
Sbjct: 117 IAAISFQIARNAVWSKSWGPRPCEPEKALRVARNALKRAPLLIPIFNHCYIPSNPSLAGN 176

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSS--SNFSRRS 238
           PIF+VDE+RIFCCGLDLSDFF+RESLFRS+E+DP +L KQRSVSE+TAG S  + FSRRS
Sbjct: 177 PIFFVDESRIFCCGLDLSDFFDRESLFRSSEADPILLKKQRSVSEKTAGVSVSAAFSRRS 236

Query: 239 LDAGLGSRTPRWVEFWSDAAIDRRRRN------SSSSSSSSPERFFDMPRSEIPKWVDDY 292
           LD+G   RTPRWVEFWSDAA D+RRRN      SS S+SSSPERFF+MPRS++P WV++Y
Sbjct: 237 LDSG--ERTPRWVEFWSDAATDKRRRNSSSSSSSSLSASSSPERFFEMPRSKVPGWVEEY 294

Query: 293 MGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKS 352
           +G+IGSVL+ GGW E DI E+V VSASGFFEGEMV+LDNQ++LD LLLKAD+ S+SLRK+
Sbjct: 295 IGKIGSVLKAGGWGESDINEMVEVSASGFFEGEMVVLDNQALLDALLLKADKFSDSLRKA 354

Query: 353 GWSSEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
           GWSSEEVS+A GFDFRPEKERKPAKKLSP+L ERI KLA+SVSRS
Sbjct: 355 GWSSEEVSEALGFDFRPEKERKPAKKLSPQLAERIEKLAQSVSRS 399

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240167|ref|NP_201503.1| uncharacterized protein [Arabidopsis thaliana] gi|9758547|dbj|BAB08941.1| unnamed protein product [Arabidopsis thaliana] gi|115646816|gb|ABJ17128.1| At5g67020 [Arabidopsis thaliana] gi|332010908|gb|AED98291.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/399 (75%), Positives = 342/399 (85%), Gaps = 7/399 (1%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRMTGL PAH AGLRRLSARAAAP+T T   +RN L SFS  ADKVI HLKNSGI
Sbjct: 1   MVDVDRRMTGLTPAHAAGLRRLSARAAAPSTPT---IRNSLQSFSPFADKVINHLKNSGI 57

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
           ++QPGLSD EFAR EAEFGF FPPDLR ILSAGL +G GFPDWR+ G ARLHLRA +DLP
Sbjct: 58  KIQPGLSDTEFARVEAEFGFTFPPDLRVILSAGLSVGAGFPDWRSPG-ARLHLRAMIDLP 116

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           +AA++FQIA+N+LW KSWG +P DPEKALRVARNALKRAPLLIPIF+HCYIPCNP+LAGN
Sbjct: 117 VAAVSFQIAKNSLWCKSWGLKPPDPEKALRVARNALKRAPLLIPIFDHCYIPCNPSLAGN 176

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLD 240
           P+F++DE RIFCCG DLS+FFERES FRS+E  P++L KQRSVSE++AGSSSNFSRRSLD
Sbjct: 177 PVFFIDETRIFCCGSDLSEFFERESAFRSSEFFPRILTKQRSVSEKSAGSSSNFSRRSLD 236

Query: 241 AGL--GSRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQIGS 298
            G   G+   RWVEFWSDAA+DR RRNS+S+SSSS     D+P++E PKWV+ Y+ +IGS
Sbjct: 237 LGRANGAGKSRWVEFWSDAAVDRCRRNSASTSSSS-SSSPDLPKTETPKWVNQYVNRIGS 295

Query: 299 VLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEE 358
           VLR GGWSE DI EI+ VSASGFFEGEMV++DNQ+VLD LLLKA R+SESLRKSGWSSEE
Sbjct: 296 VLRRGGWSESDIDEIIHVSASGFFEGEMVIIDNQTVLDVLLLKAGRISESLRKSGWSSEE 355

Query: 359 VSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
           VSDA GFDFRPEKERKP KKLSP LVE+  KLAE VS+S
Sbjct: 356 VSDALGFDFRPEKERKPVKKLSPMLVEQFEKLAEWVSQS 394

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463975|ref|XP_004149705.1| PREDICTED: uncharacterized protein LOC101213140 [Cucumis sativus] gi|449508304|ref|XP_004163277.1| PREDICTED: uncharacterized LOC101213140 [Cucumis sativus]

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 303/398 (76%), Positives = 350/398 (87%), Gaps = 6/398 (1%)

Query: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPTTATSLPVRNGLVSFSSLADKVITHLKNSGI 60
           MVDVDRRM+ LNPAHIAGLRRLSARA      +S P+RN L+SFSSLADKV+THL+NSG+
Sbjct: 1   MVDVDRRMSTLNPAHIAGLRRLSARA---AATSSAPLRNSLLSFSSLADKVLTHLRNSGV 57

Query: 61  RVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
           +VQPGLSDAEFARAEAEF F FPPDLRA+LSAGLP+GPGFPDWR+ G ARLHLR+SLDLP
Sbjct: 58  QVQPGLSDAEFARAEAEFCFSFPPDLRAVLSAGLPVGPGFPDWRSAG-ARLHLRSSLDLP 116

Query: 121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
           IAAI+FQIA+N LWS SWG +P++PEKALR+ARN LKRAP+LIPIFNHCYIPCNP LAGN
Sbjct: 117 IAAISFQIAKNTLWSCSWGHKPAEPEKALRIARNLLKRAPVLIPIFNHCYIPCNPPLAGN 176

Query: 181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLI-KQRSVSERTAGSSSNFSRRSL 239
           PIF+VDENR+ CCG DLSDFFERESLFR + SD   L  KQ S+++++   S+NFSRRS+
Sbjct: 177 PIFFVDENRVLCCGFDLSDFFERESLFRCSVSDSDSLFSKQSSLAQKSIVPSANFSRRSM 236

Query: 240 DAGLGSRTPRWVEFWSDAAIDRRRRNSSSSSSSSPERFFDMPRSEIPKWVDDYMGQIGSV 299
           D+G+  RTPRWVEFWSDAAIDRRRRNSSSSS+SSP+RFF+MPRSE+PKWV  Y+ ++GSV
Sbjct: 237 DSGV-VRTPRWVEFWSDAAIDRRRRNSSSSSNSSPDRFFEMPRSEVPKWVGKYLVELGSV 295

Query: 300 LREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEEV 359
           LR GGWSE ++ E+V VSA+G F+GEMVMLDNQ+VLD LLLK DR S SLR+SGWSSEEV
Sbjct: 296 LRTGGWSESEVAEMVEVSAAGIFDGEMVMLDNQAVLDALLLKVDRFSGSLRRSGWSSEEV 355

Query: 360 SDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
           S+AFGFDFRPEK +K AKKLS ELVERIGKLAESVSRS
Sbjct: 356 SEAFGFDFRPEKGKKLAKKLSAELVERIGKLAESVSRS 393

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
TAIR|locus:2074870	403	AT3G50340 "AT3G50340" [Arabido	0.989	0.975	0.697	1.9e-147
TAIR|locus:2158128	394	AT5G67020 "AT5G67020" [Arabido	0.987	0.994	0.669	5.6e-139
TAIR|locus:2062245	325	AT2G22790 "AT2G22790" [Arabido	0.370	0.452	0.350	2.2e-27

TAIR|locus:2074870 AT3G50340 "AT3G50340" [Arabidopsis thaliana (taxid:3702)]

 Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
 Identities = 284/407 (69%), Positives = 319/407 (78%)

Query:     1 MVDVDRRMTGLNPAHIAGXXXXXXXXXXXXXXXXXXVRNGLVSFSSLADKVITHLKNSGI 60
             MVDVDRRMTGL PAH AG                  VRN LVSFSSLAD+VI+HL  S I
Sbjct:     1 MVDVDRRMTGLRPAHAAGLRRLSARAAAPTTPT---VRNSLVSFSSLADQVISHLHTSRI 57

Query:    61 RVQPGLSDXXXXXXXXXXXXXXPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
             +VQPGL+D              PPDLRA+L+AGLP+G GFPDWR+ G ARLHLRA +DLP
Sbjct:    58 QVQPGLTDSEFARAEAEFAFAFPPDLRAVLTAGLPVGAGFPDWRSPG-ARLHLRAMIDLP 116

Query:   121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
             IAA++FQIARN LWSKSWG RPSDPEKALRVARNALKRAPL+IPIF+HCYIPCNP+LAGN
Sbjct:   117 IAAVSFQIARNTLWSKSWGLRPSDPEKALRVARNALKRAPLMIPIFDHCYIPCNPSLAGN 176

Query:   181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSS----NFSR 236
             P+FY+DE RIFCCG DLSDFFERES+FR +++ P VL KQRSVSE++AGSSS    NFSR
Sbjct:   177 PVFYIDETRIFCCGSDLSDFFERESVFRGSDTCPVVLTKQRSVSEKSAGSSSSSSSNFSR 236

Query:   237 RSLDAGL--GSRTPRWVEFWSDAAIDX----XXXXXXXXXXXXPERFFDMPRSEIPKWVD 290
              SLD+G   GS TPRWVEFWSDAA+D                 PER+ D+PRSE PKWVD
Sbjct:   237 MSLDSGRVHGSSTPRWVEFWSDAAVDRRRRNSASSMSSSHSSSPERYLDLPRSETPKWVD 296

Query:   291 DYMGQIGSVLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLR 350
             DY+ +IGSVLR GGWSE D+ +IV VSASGFFEGEMV+LDNQ+VLD LLLKA R SESLR
Sbjct:   297 DYVNRIGSVLRGGGWSESDVDDIVHVSASGFFEGEMVILDNQAVLDALLLKAGRFSESLR 356

Query:   351 KSGWSSEEVSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
             K+GWSSEEVSDA GFDFRPEKE+KP KKLSPELV+RIGKLAESVSRS
Sbjct:   357 KAGWSSEEVSDALGFDFRPEKEKKPVKKLSPELVQRIGKLAESVSRS 403

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2158128 AT5G67020 "AT5G67020" [Arabidopsis thaliana (taxid:3702)]

 Score = 1360 (483.8 bits), Expect = 5.6e-139, P = 5.6e-139
 Identities = 267/399 (66%), Positives = 305/399 (76%)

Query:     1 MVDVDRRMTGLNPAHIAGXXXXXXXXXXXXXXXXXXVRNGLVSFSSLADKVITHLKNSGI 60
             MVDVDRRMTGL PAH AG                  +RN L SFS  ADKVI HLKNSGI
Sbjct:     1 MVDVDRRMTGLTPAHAAGLRRLSARAAAPSTPT---IRNSLQSFSPFADKVINHLKNSGI 57

Query:    61 RVQPGLSDXXXXXXXXXXXXXXPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLP 120
             ++QPGLSD              PPDLR ILSAGL +G GFPDWR+ G ARLHLRA +DLP
Sbjct:    58 KIQPGLSDTEFARVEAEFGFTFPPDLRVILSAGLSVGAGFPDWRSPG-ARLHLRAMIDLP 116

Query:   121 IAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGN 180
             +AA++FQIA+N+LW KSWG +P DPEKALRVARNALKRAPLLIPIF+HCYIPCNP+LAGN
Sbjct:   117 VAAVSFQIAKNSLWCKSWGLKPPDPEKALRVARNALKRAPLLIPIFDHCYIPCNPSLAGN 176

Query:   181 PIFYVDENRIFCCGLDLSDFFERESLFRSTESDPQVLIKQRSVSERTAGSSSNFSRRSLD 240
             P+F++DE RIFCCG DLS+FFERES FRS+E  P++L KQRSVSE++AGSSSNFSRRSLD
Sbjct:   177 PVFFIDETRIFCCGSDLSEFFERESAFRSSEFFPRILTKQRSVSEKSAGSSSNFSRRSLD 236

Query:   241 AGL--GSRTPRWVEFWSDAAIDXXXXXXXXXXXXXPERFFDMPRSEIPKWVDDYMGQIGS 298
              G   G+   RWVEFWSDAA+D                  D+P++E PKWV+ Y+ +IGS
Sbjct:   237 LGRANGAGKSRWVEFWSDAAVDRCRRNSASTSSSSSSSP-DLPKTETPKWVNQYVNRIGS 295

Query:   299 VLREGGWSEPDIVEIVTVSASGFFEGEMVMLDNQSVLDGLLLKADRLSESLRKSGWSSEE 358
             VLR GGWSE DI EI+ VSASGFFEGEMV++DNQ+VLD LLLKA R+SESLRKSGWSSEE
Sbjct:   296 VLRRGGWSESDIDEIIHVSASGFFEGEMVIIDNQTVLDVLLLKAGRISESLRKSGWSSEE 355

Query:   359 VSDAFGFDFRPEKERKPAKKLSPELVERIGKLAESVSRS 397
             VSDA GFDFRPEKERKP KKLSP LVE+  KLAE VS+S
Sbjct:   356 VSDALGFDFRPEKERKPVKKLSPMLVEQFEKLAEWVSQS 394

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2062245 AT2G22790 "AT2G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
 Identities = 54/154 (35%), Positives = 85/154 (55%)

Query:    51 VITHLKN-SGIRVQPGLSDXXXXXXXXXXXXXXPPDLRAILSAGLPLGPGFPDWRATGSA 109
             ++ H K+ +G  V PGL++              P DLR+IL  GLP+G  FP+WR TGS 
Sbjct:    36 IVNHFKSQTGNHVSPGLTNQEISAVESSHGFSFPLDLRSILQTGLPVGTNFPNWR-TGSN 94

Query:   110 RLHLRASLDLPIAAITFQIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNHC 169
             R +L     LP+  ++  + RN  W  SWG RP +  +AL + +  ++ AP+L+P++   
Sbjct:    95 RNNLL----LPLLNLSQHVVRNGFWVDSWGIRPGNDAEALSLVKKLIEIAPVLVPVYGDF 150

Query:   170 YIPCN-PTLAGNPIFYVDENRIFCCGLDLSDFFE 202
             Y+P   P LAGNP+F +D + +     D+  F +
Sbjct:   151 YVPSTTPNLAGNPVFQIDGDGVRELSCDVVGFLK 184

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VII000883 hypothetical protein (399 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	397
pfam04042	189	pfam04042, DNA_pol_E_B, DNA polymerase alpha/epsil	0.003

>gnl|CDD|217857 pfam04042, DNA_pol_E_B, DNA polymerase alpha/epsilon subunit B

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 11/91 (12%)

Query: 140 PRPSDPEKALRVARNALKRAPLLIPIFNHCYIPCNPTLAGNP-IFYVDENRIFCCGLDLS 198
           P P+DP          L + P    +F       +     NP  F ++   I     D  
Sbjct: 66  PGPNDP-----TNSTVLPQPPFPRCLFPKSKKYNSLQFVTNPCRFSINGVEIVVTSGDNV 120

Query: 199 DFFERESLFRSTESDPQV-----LIKQRSVS 224
               R SL  S+  +  +     +++QR + 
Sbjct: 121 KDLLRYSLKFSSSEERLLRLVETILRQRHLY 151

This family contains a number of DNA polymerase subunits. The B subunit of the DNA polymerase alpha plays an essential role at the initial stage of DNA replication in S. cerevisiae and is phosphorylated in a cell cycle-dependent manner. DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure. Length = 189

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	397
PF09346	130	SMI1_KNR4: SMI1 / KNR4 family (SUKH-1); InterPro:	96.9
smart00860	129	SMI1_KNR4 SMI1 / KNR4 family. Proteins in this fam	96.81
PF14567	132	SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A.	96.06
PF14568	120	SUKH_6: SMI1-KNR4 cell-wall; PDB: 2PRV_A.	95.4
COG4282	191	SMI1 Protein involved in beta-1,3-glucan synthesis	92.15

>PF09346 SMI1_KNR4: SMI1 / KNR4 family (SUKH-1); InterPro: IPR018958 Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation [, ]

Probab=96.90  E-value=0.00074  Score=54.44  Aligned_cols=28  Identities=21%  Similarity=0.452  Sum_probs=20.9

Q ss_pred             CCCHHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           65 GLSDAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        65 GLSD~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      ++|++||+.+|+++|++||+|+|.||+.
T Consensus         1 p~t~~~I~~~E~~lg~~LP~~yk~fl~~   28 (130)
T PF09346_consen    1 PATEEEIQELEEKLGVRLPDDYKEFLKE   28 (130)
T ss_dssp             ---HHHHHHHHHHHTS---HHHHHHHH-
T ss_pred             CCCHHHHHHHHHHhCCCCcHHHHHHHHh
Confidence            5899999999999999999999999995

Yeast members of this family are involved in the regulation of cell wall assembly. Saccharomyces cerevisiae (Baker's yeast) protein KNR4 (SMI1) has a regulatory role in chitin deposition and in cell wall assembly []. It was originally identified as a regulator of chitin synthase expression (acting as a repressor) [] and of 1,3-beta-glucan synthase levels []. It was shown to localise in patches at presumptive bud sites in unbudded cells and at the incipient bud site during bud emergence []. KNR4 is believed to connect the PKC1-SLT2 MAPK pathway with cell proliferation. It has been shown to interact with BCK2, a gene involved in cell cycle progression in S. cerevisiae (forming a complex) to allow PKC1 to coordinate the cell cycle (cell proliferation) with cell wall integrity [, ]. PKC1 plays an essential role in cell wall integrity and cell proliferation through a bifurcated PKC1/mitogen-activated protein (MAP) kinase pathway. KNR4 also interacts with the tyrosine-tRNA synthetase protein encoded by TYS1 and is involved in sporulation process []. Note: previously reported evidence that KNR4 may interact with nuclear matrix-association region [] may be due to an artefact [].; PDB: 3D5P_A 2ICG_A.

>smart00860 SMI1_KNR4 SMI1 / KNR4 family

Probab=96.81  E-value=0.0013  Score=51.27  Aligned_cols=28  Identities=29%  Similarity=0.463  Sum_probs=26.7

Q ss_pred             CCCHHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           65 GLSDAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        65 GLSD~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      |+|++||..+|+.+|++||+|+|.||+.
T Consensus         1 ~~s~~~i~~~e~~lg~~LP~~y~~f~~~   28 (129)
T smart00860        1 PASEEEIAELEKKLGIKLPEDYKEFLLL   28 (129)
T ss_pred             CCCHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            5799999999999999999999999996

Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.

>PF14567 SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A

Probab=96.06  E-value=0.0059  Score=54.65  Aligned_cols=44  Identities=23%  Similarity=0.450  Sum_probs=29.6

Q ss_pred             HHHHHHHhhCC--CccCCC-CCHHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           49 DKVITHLKNSG--IRVQPG-LSDAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        49 ~~vi~~L~~~G--V~i~pG-LSD~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      ..+|+.|++.+  ++..-+ =|+++|..+|+..||.||+|+|+||..
T Consensus         2 ~~~i~~L~~~~e~~~~~l~lpd~e~I~~~Ee~L~i~lP~eyk~fL~~   48 (132)
T PF14567_consen    2 EDIIERLKELNEPVPVPLELPDDEQIVEAEEQLGISLPEEYKEFLLE   48 (132)
T ss_dssp             HHHHHHHHHH----SS------HHHHHHHHHHHT----HHHHHHHHH
T ss_pred             hHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            46899999954  444433 589999999999999999999999986

>PF14568 SUKH_6: SMI1-KNR4 cell-wall; PDB: 2PRV_A

Probab=95.40  E-value=0.012  Score=47.86  Aligned_cols=25  Identities=28%  Similarity=0.575  Sum_probs=20.2

Q ss_pred             HHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           68 DAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        68 D~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      |+||..+|+++|++||.|+|.||.+
T Consensus         1 ee~I~~~E~~Lg~~lP~~Yk~fL~~   25 (120)
T PF14568_consen    1 EEEIEEAEKKLGVKLPEDYKEFLKE   25 (120)
T ss_dssp             -HHHHHHHHHHTS---HHHHHHHHH
T ss_pred             ChHHHHHHHHhCCCCCHHHHHHHHH
Confidence            6899999999999999999999996

>COG4282 SMI1 Protein involved in beta-1,3-glucan synthesis [Carbohydrate transport and metabolism]

Probab=92.15  E-value=0.2  Score=47.30  Aligned_cols=40  Identities=35%  Similarity=0.577  Sum_probs=35.3

Q ss_pred             hCCCccCCCCCHHHHHHHHHHcCCCCChhHHHHHHc--cCCC
Q 037682           57 NSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSA--GLPL   96 (397)
Q Consensus        57 ~~GV~i~pGLSD~Ef~~IEa~fgF~FPpDlRa~L~~--GLPv   96 (397)
                      ..-..+.||-|-..|+++|+.||.+||||.|+.|+.  |-|-
T Consensus        24 dl~~~l~pgat~~di~~aE~dlg~tlPpdvResl~iHDGq~d   65 (191)
T COG4282          24 DLLPFLRPGATCGDIQRAEADLGRTLPPDVRESLAIHDGQPD   65 (191)
T ss_pred             ccccccCCCccHHHHHHHHHHhcCcCChHHHHHHHhhCCCcC
Confidence            344789999999999999999999999999999986  6663

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	397
2pag_A	135	Hypothetical protein; nysgx, target 10412I, novel	97.16
2icg_A	160	LIN2918 protein; hypothetical protein, structural	96.89
2prv_A	153	Uncharacterized protein YOBK; structural genomics,	96.77
3d5p_A	144	Putative glucan synthesis regulator of SMI1/KNR4;	96.34

>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1

Probab=97.16  E-value=0.00044  Score=59.53  Aligned_cols=43  Identities=14%  Similarity=0.247  Sum_probs=36.1

Q ss_pred             HHHHHHhh--CC--CccCCCCCHHHHHHHHHHcCCCCChhHHHHHHcc
Q 037682           50 KVITHLKN--SG--IRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAG   93 (397)
Q Consensus        50 ~vi~~L~~--~G--V~i~pGLSD~Ef~~IEa~fgF~FPpDlRa~L~~G   93 (397)
                      .||+.|++  ..  +.+.+- |+++|..+|+.+|++||+|+|.||..+
T Consensus         3 ~~ie~L~~~~~~~~~~~~~~-t~e~I~~~E~~Lgi~fP~dYk~fl~~~   49 (135)
T 2pag_A            3 EVIEQLREANEPVPVPLELP-DEDQLVEIEEQLFINIPFVFKEFLLTV   49 (135)
T ss_dssp             HHHHHHHHHCCCCSSCCCCC-CHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHCCCCCHHHHHHHHHC
Confidence            67888887  33  444444 999999999999999999999999986

>2icg_A LIN2918 protein; hypothetical protein, structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 1.65A {Listeria innocua} SCOP: d.369.1.1

Probab=96.89  E-value=0.0013  Score=56.51  Aligned_cols=46  Identities=15%  Similarity=0.184  Sum_probs=39.3

Q ss_pred             cHHHHHHHHhhCC--CccCCCCCHHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           47 LADKVITHLKNSG--IRVQPGLSDAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        47 ~~~~vi~~L~~~G--V~i~pGLSD~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      +-++|.+.+.+.+  +....++|+++|..+|+.+|++||.|+|.||..
T Consensus         6 ~~~~i~~~i~~~~~~~~~~~~~s~~~I~~~E~~Lgi~lP~~Yk~fL~~   53 (160)
T 2icg_A            6 FLEEVDRLITLSGITFHASGTGTPELIKIYQDALGNEFPETYKLFLEK   53 (160)
T ss_dssp             HHHHHHHHHHHCCSCCBCCCCCCHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccccccCCCCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            3456666666655  677889999999999999999999999999997

>2prv_A Uncharacterized protein YOBK; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacillus subtilis} SCOP: d.369.1.1

Probab=96.77  E-value=0.0016  Score=55.88  Aligned_cols=43  Identities=19%  Similarity=0.280  Sum_probs=36.2

Q ss_pred             HHHHHHHhhCCCccCCCCCHHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           49 DKVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        49 ~~vi~~L~~~GV~i~pGLSD~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      +++|+.+++. .....+.|+++|..+|+.+|++||.|+|.||..
T Consensus         8 ~~li~~~~~~-~~~~~~~see~I~~~E~~Lgi~lP~dYk~fLk~   50 (153)
T 2prv_A            8 ENFINENKQN-AIFTEGASHENIGRIEENLQCDLPNSYKWFLEK   50 (153)
T ss_dssp             HHHHHHHGGG-CEECCCCCHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred             HHHHHHhhhh-cccCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            3556666655 356679999999999999999999999999996

>3d5p_A Putative glucan synthesis regulator of SMI1/KNR4; STR genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Bacteroides fragilis nctc 9343}

Probab=96.34  E-value=0.0025  Score=54.35  Aligned_cols=110  Identities=17%  Similarity=0.119  Sum_probs=67.2

Q ss_pred             CccCCCCCHHHHHHHHHHcCCCCChhHHHHHHccCCCCCCCCCCCCCcccHHHHHHhhcchhhHHHHHHHhhcccccCCC
Q 037682           60 IRVQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPDWRATGSARLHLRASLDLPIAAITFQIARNALWSKSWG  139 (397)
Q Consensus        60 V~i~pGLSD~Ef~~IEa~fgF~FPpDlRa~L~~GLPvG~gFPdWR~~~~~~~~Lr~~L~~P~~gil~~V~~n~fW~~sWG  139 (397)
                      ....+++|++||..+|+.+|++||.|+|.||..   .+.+.+.-.+.   .  +   .=++++.|..   .|.-+.    
T Consensus         9 ~~~~~~~s~~~I~~~E~~lgi~lP~~Yk~fl~~---~NGg~~~~~~~---~--~---~l~~~~~i~e---~n~~~~----   70 (144)
T 3d5p_A            9 WYKKDGASSASIDDVEKLLNTTLPKQYKSFLLW---SNGGEGKLGDN---Y--I---YIWAIEDVIA---YNHDYG----   70 (144)
T ss_dssp             EEECCCCCHHHHHHHHHHHTSCCCHHHHHHHHH---CSSEEEEETTE---E--E---EECCHHHHHH---HHHHHT----
T ss_pred             cccCCCCCHHHHHHHHHHhCCCCCHHHHHHHHH---hCCCcccCCCc---e--e---EeeCHHHHHH---HHHHhh----
Confidence            367899999999999999999999999999996   11111110000   0  0   0022233322   111110    


Q ss_pred             CCCCCHHHHHHHHHHhhhcCCc-eeeecc---cccccCCCCCCCCCeEEEeC-----CceEEEcCchhHHHHHhh
Q 037682          140 PRPSDPEKALRVARNALKRAPL-LIPIFN---HCYIPCNPTLAGNPIFYVDE-----NRIFCCGLDLSDFFERES  205 (397)
Q Consensus       140 ~RP~~~~eal~~Ar~~l~~aP~-LVPIyg---HRYlPs~p~~aGnPVfSV~~-----tDIi~yG~DLadyf~rEf  205 (397)
                                    . -...|. +|||.+   -||.=..   ...+|+.++.     .++.++.-++.+|+.+-.
T Consensus        71 --------------~-~~~~p~~~i~i~~D~g~~~~~d~---~~~~V~~~d~~~~~~~~~~~iA~sF~eFL~~~~  127 (144)
T 3d5p_A           71 --------------I-QKYLQKEYWAFGMDGDIGYILHL---SDNSIYRVDLGDLDITSIKYIAPSFDDFLGKAI  127 (144)
T ss_dssp             --------------H-HHHSCTTEEEEEEETTEEEEEET---TTCCEEEEETTSCCGGGCEEEESSHHHHHHHHT
T ss_pred             --------------h-hhhcCCCEEEEEEcCCeEEEECC---CCCEEEEEECCCCChhhheeHhhCHHHHHHHHh
Confidence                          0 112577 999965   4564322   1246887655     368899999999998766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	397
d2icga1	158	d.369.1.1 (A:1-158) Uncharacterized protein Lin291	0.003

>d2icga1 d.369.1.1 (A:1-158) Uncharacterized protein Lin2918 {Listeria innocua [TaxId: 1642]} Length = 158

class: Alpha and beta proteins (a+b)
fold: SMI1/KNR4-like
superfamily: SMI1/KNR4-like
family: SMI1/KNR4-like
domain: Uncharacterized protein Lin2918
species: Listeria innocua [TaxId: 1642]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 4/96 (4%)

Query: 45  SSLADKVITHLKNSGIR--VQPGLSDAEFARAEAEFGFVFPPDLRAILSAGLPLGPGFPD 102
           SS  ++V   +  SGI        +       +   G  FP   +  L         F  
Sbjct: 3   SSFLEEVDRLITLSGITFHASGTGTPELIKIYQDALGNEFPETYKLFLEKY--GTLTFNG 60

Query: 103 WRATGSARLHLRASLDLPIAAITFQIARNALWSKSW 138
               G ++  L A+    +   T Q       +K  
Sbjct: 61  VSFYGISKRGLSAASIPDVKFATEQARTFGDINKEM 96

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	397
d2prva1	152	Uncharacterized protein YobK {Bacillus subtilis [T	98.03
d2icga1	158	Uncharacterized protein Lin2918 {Listeria innocua	97.28
d2paga1	135	Hypothetical protein PSPTO5518 {Pseudomonas syring	96.89

>d2prva1 d.369.1.1 (A:1-152) Uncharacterized protein YobK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: SMI1/KNR4-like
superfamily: SMI1/KNR4-like
family: SMI1/KNR4-like
domain: Uncharacterized protein YobK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.03  E-value=1.6e-05  Score=65.71  Aligned_cols=120  Identities=16%  Similarity=0.166  Sum_probs=72.8

Q ss_pred             HHHHHHhhCCCccCCCCCHHHHHHHHHHcCCCCChhHHHHHHc---cCCCCCCCCCCCCCcccHHHHHHhhcchhhHHHH
Q 037682           50 KVITHLKNSGIRVQPGLSDAEFARAEAEFGFVFPPDLRAILSA---GLPLGPGFPDWRATGSARLHLRASLDLPIAAITF  126 (397)
Q Consensus        50 ~vi~~L~~~GV~i~pGLSD~Ef~~IEa~fgF~FPpDlRa~L~~---GLPvG~gFPdWR~~~~~~~~Lr~~L~~P~~gil~  126 (397)
                      ++|+..+. +..+.+|.|++||+++|+.+|++||+|+|.||..   |...+..+..+....  ...+             
T Consensus         8 ~~i~~~~~-~~~~~~gas~e~I~~~E~~Lg~~LP~~Yk~fL~~~ng~~~~~~~~~~~~~~~--~~~i-------------   71 (152)
T d2prva1           8 NFINENKQ-NAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLVLGYNFDH--ASVV-------------   71 (152)
T ss_dssp             HHHHHHGG-GCEECCCCCHHHHHHHHHHHTSCCCHHHHHHHHHHCSEEETTEEECCCCSSS--CHHH-------------
T ss_pred             HHHHHccc-ccccCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHcCCccccCceEeeccccc--hHHH-------------
Confidence            34445544 3558899999999999999999999999999996   333333344433331  1111             


Q ss_pred             HHHhhcccccCCCCCCCCHHHHHHHHHHhhhcCCceeeeccc-----ccccCCCCCCCCCeEEEeC--CceEEEcCchhH
Q 037682          127 QIARNALWSKSWGPRPSDPEKALRVARNALKRAPLLIPIFNH-----CYIPCNPTLAGNPIFYVDE--NRIFCCGLDLSD  199 (397)
Q Consensus       127 ~V~~n~fW~~sWG~RP~~~~eal~~Ar~~l~~aP~LVPIygH-----RYlPs~p~~aGnPVfSV~~--tDIi~yG~DLad  199 (397)
                        ..+..+.+.|+                  -...+||++.+     |+.-......-.||+.-+.  ..+..+..++.+
T Consensus        72 --~~~~~~~~~~~------------------~p~~~i~~~~~gg~~~~~d~~~~~~~~~~V~~~~~~~~~~~~iA~SF~e  131 (152)
T d2prva1          72 --NRTNEYKEHYG------------------LTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIGYQDTVADSFIE  131 (152)
T ss_dssp             --HHHHHHHHHSC------------------CCTTEEEEEECSSEEEEEETTSCBTTBCCEEEEETTTEEEEEEESSHHH
T ss_pred             --HhhHHHHHhcc------------------CCCceEEEEcCCCCEEEEEeccCCCCCCCeEEEecCCCeEEEhhcCHHH
Confidence              11111111122                  23457888763     4444443222346766543  467888999999


Q ss_pred             HHHHhh
Q 037682          200 FFERES  205 (397)
Q Consensus       200 yf~rEf  205 (397)
                      ||.+.+
T Consensus       132 fL~~~~  137 (152)
T d2prva1         132 FFYNKI  137 (152)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            997654

>d2icga1 d.369.1.1 (A:1-158) Uncharacterized protein Lin2918 {Listeria innocua [TaxId: 1642]}

class: Alpha and beta proteins (a+b)
fold: SMI1/KNR4-like
superfamily: SMI1/KNR4-like
family: SMI1/KNR4-like
domain: Uncharacterized protein Lin2918
species: Listeria innocua [TaxId: 1642]

Probab=97.28  E-value=0.00014  Score=60.31  Aligned_cols=47  Identities=17%  Similarity=0.195  Sum_probs=41.2

Q ss_pred             ccHHHHHHHHhhCC--CccCCCCCHHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           46 SLADKVITHLKNSG--IRVQPGLSDAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        46 ~~~~~vi~~L~~~G--V~i~pGLSD~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      +.-++|-+.+...+  ....++-|+++|+++|+.+|++||+|+|.||..
T Consensus         4 ~~~e~~~~~~~~~~~~~~~~~~at~E~I~~~E~~LG~~lP~~Yr~fL~~   52 (158)
T d2icga1           4 SFLEEVDRLITLSGITFHASGTGTPELIKIYQDALGNEFPETYKLFLEK   52 (158)
T ss_dssp             HHHHHHHHHHHHCCSCCBCCCCCCHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            34567888888888  456788999999999999999999999999997

>d2paga1 d.369.1.1 (A:1-135) Hypothetical protein PSPTO5518 {Pseudomonas syringae pv. tomato [TaxId: 323]}

class: Alpha and beta proteins (a+b)
fold: SMI1/KNR4-like
superfamily: SMI1/KNR4-like
family: SMI1/KNR4-like
domain: Hypothetical protein PSPTO5518
species: Pseudomonas syringae pv. tomato [TaxId: 323]

Probab=96.89  E-value=0.00049  Score=57.77  Aligned_cols=44  Identities=18%  Similarity=0.343  Sum_probs=35.9

Q ss_pred             HHHHHHHhhCC--CccCCCC-CHHHHHHHHHHcCCCCChhHHHHHHc
Q 037682           49 DKVITHLKNSG--IRVQPGL-SDAEFARAEAEFGFVFPPDLRAILSA   92 (397)
Q Consensus        49 ~~vi~~L~~~G--V~i~pGL-SD~Ef~~IEa~fgF~FPpDlRa~L~~   92 (397)
                      ..||+.|++..  +++...+ |+++|..+|+.+|++||+|+|.||..
T Consensus         2 ~eiie~L~~~~~~~p~~~e~pt~e~I~~~E~~lg~~~P~~yk~fl~~   48 (135)
T d2paga1           2 EEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLT   48 (135)
T ss_dssp             HHHHHHHHHHCCCCSSCCCCCCHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             hHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            35777777764  4444444 99999999999999999999999987