Citrus Sinensis ID: 037698

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
MSSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDNAKLNLLIEVLDDDDAITKPKKAPSAA
cccccEEEEEEccccccHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHEEEEEcEEccccEEEEEcccEEEEcccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHcccccHHHHHHHHHHHcccccccccccccccc
cccccEEEEEEccccHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccEEEEEEccccHHHHHHHHcccccEEEEEEEEEEEEEccEEEEEcHHHHHHHHHHHHHccccccEEEcccccccccccccccEEEEEcccccccccccHcccccccccccccEEEEcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHcccHHcccccEEEEEEEcccccccEcccccccccHHHHHHHHHHHHHHHHcccHHHHHHccccHHHcHHHHHHHHccccccccccccccc
MSSKRAYVTFLAGNGDYVKGVVGLVKGLrkaksayplavavlpdvpadhRKILVSQgcivreiqpvyppenqtqFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDhlfelpngylyaamdcfcektwsnspqykigycqqcpekvkwpasmgspppkyfnagmfvyepnllTYSHLLEtlkvtppssfaeqDFLNNFFRNIYKPISHTYNFVLAMLWrhpehvetekVKVVHYCasgskpwrytgkeenmdrEDIKMLVKKWKDIYEdksldyknlamddNAKLNLLIEvlddddaitkpkkapsaa
MSSKRAYVTflagngdyvkGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCasgskpwrytgkeenmdreDIKMLVKKWKDIYEDKSLDYKNLAMDDNAKLNLLIEvlddddaitkpkkapsaa
MSSKRAYVTFLAGNGDYvkgvvglvkglRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPehvetekvkvvhYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDNAKLNLLIEVLDDDDAITKPKKAPSAA
*****AYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMG**PPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDNAKLNLLIEVLD***************
*SSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSL************************************
MSSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDNAKLNLLIEVLDDDDAI**********
***KRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDN*KL*L*IEVLDD**************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDNAKLNLLIEVLDDDDAITKPKKAPSAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query314 2.2.26 [Sep-21-2011]
C7G304338 Galactinol synthase 2 OS= N/A no 0.990 0.920 0.744 1e-140
Q9FXB2335 Galactinol synthase 2 OS= yes no 0.993 0.931 0.751 1e-140
O22893344 Galactinol synthase 1 OS= no no 0.929 0.848 0.781 1e-138
Q9XGN4333 Galactinol synthase 1 OS= N/A no 0.993 0.936 0.700 1e-133
O80518334 Galactinol synthase 3 OS= no no 0.990 0.931 0.706 1e-132
O22693334 Galactinol synthase 4 OS= no no 0.980 0.922 0.715 1e-131
Q8H1S1336 Galactinol synthase 6 OS= no no 0.987 0.922 0.691 1e-131
Q9FFA1333 Galactinol synthase 5 OS= no no 0.980 0.924 0.680 1e-126
Q9XGN3292 Galactinol synthase 2 (Fr N/A no 0.929 1.0 0.713 1e-125
F4KED2328 Galactinol synthase 10 OS no no 0.945 0.905 0.681 1e-123
>sp|C7G304|GOLS2_SOLLC Galactinol synthase 2 OS=Solanum lycopersicum GN=GOLS2 PE=2 SV=1 Back     alignment and function desciption
 Score =  498 bits (1283), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/317 (74%), Positives = 270/317 (85%), Gaps = 6/317 (1%)

Query: 3   SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVRE 62
           S RAYVTFLAGNGDY KGVVGLVKGLRKAKSAYPL VA LPDVP +HR+IL++QGCIVRE
Sbjct: 22  SSRAYVTFLAGNGDYWKGVVGLVKGLRKAKSAYPLVVACLPDVPEEHRRILINQGCIVRE 81

Query: 63  IQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYL 122
           I+PVYPP NQTQFAMAYYVINYSKLRIWEFVEY+KMIYLDGDIQVF+NIDHLF+LP+GY 
Sbjct: 82  IEPVYPPHNQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGYF 141

Query: 123 YAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSH 182
           YA MDCFCEKTWS++PQYK+GYCQQCP+KV+W   +G  P  YFNAGMFVYEP+L TY  
Sbjct: 142 YAVMDCFCEKTWSHTPQYKVGYCQQCPDKVQWTEDLGPKPSLYFNAGMFVYEPSLSTYDD 201

Query: 183 LLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCA 242
           LL+TLKVTPP+ FAEQDFLN +FR++YKPI + YN VLAMLWRHPE+V+ EKVKVVHYCA
Sbjct: 202 LLKTLKVTPPTPFAEQDFLNMYFRDVYKPIPNDYNLVLAMLWRHPENVDLEKVKVVHYCA 261

Query: 243 SGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNL-----AMDDNAKLNLLIEV 297
           +GSKPWRYTGKEENMDREDIKML+KKW DIY+D+SLDYKN      A+D   +   ++E 
Sbjct: 262 AGSKPWRYTGKEENMDREDIKMLIKKWWDIYDDESLDYKNSNVVMNAVDGEVEAQKIMEA 321

Query: 298 LDDDDAITKPKKAPSAA 314
           L  +  +     APSAA
Sbjct: 322 L-SEAGVVHYITAPSAA 337
Galactinol synthase involved in the biosynthesis of raffinose family oligosaccharides (RFOs) that function as osmoprotectants. May promote plant stress tolerance.
Solanum lycopersicum (taxid: 4081)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2EC: 3
>sp|Q9FXB2|GOLS2_ARATH Galactinol synthase 2 OS=Arabidopsis thaliana GN=GOLS2 PE=1 SV=1 Back     alignment and function description
>sp|O22893|GOLS1_ARATH Galactinol synthase 1 OS=Arabidopsis thaliana GN=GOLS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9XGN4|GOLS1_AJURE Galactinol synthase 1 OS=Ajuga reptans GN=GOLS1 PE=1 SV=1 Back     alignment and function description
>sp|O80518|GOLS3_ARATH Galactinol synthase 3 OS=Arabidopsis thaliana GN=GOLS3 PE=1 SV=1 Back     alignment and function description
>sp|O22693|GOLS4_ARATH Galactinol synthase 4 OS=Arabidopsis thaliana GN=GOLS4 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S1|GOLS6_ARATH Galactinol synthase 6 OS=Arabidopsis thaliana GN=GOLS6 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFA1|GOLS5_ARATH Galactinol synthase 5 OS=Arabidopsis thaliana GN=GOLS5 PE=2 SV=1 Back     alignment and function description
>sp|Q9XGN3|GOLS2_AJURE Galactinol synthase 2 (Fragment) OS=Ajuga reptans GN=GOLS2 PE=1 SV=1 Back     alignment and function description
>sp|F4KED2|GOLSA_ARATH Galactinol synthase 10 OS=Arabidopsis thaliana GN=GOLS10 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
255556498318 conserved hypothetical protein [Ricinus 0.990 0.977 0.788 1e-146
224108808325 predicted protein [Populus trichocarpa] 0.993 0.96 0.783 1e-144
255542966338 conserved hypothetical protein [Ricinus 0.891 0.828 0.825 1e-139
146747227336 galactinol synthase [Capsicum annuum] 0.990 0.925 0.743 1e-139
350534726338 galactinol synthase 2 [Solanum lycopersi 0.990 0.920 0.744 1e-138
15223567335 galactinol synthase 2 [Arabidopsis thali 0.993 0.931 0.751 1e-138
255542968339 conserved hypothetical protein [Ricinus 0.891 0.825 0.817 1e-138
147822236325 hypothetical protein VITISV_035072 [Viti 0.980 0.947 0.753 1e-138
147792295325 hypothetical protein VITISV_018010 [Viti 0.891 0.861 0.814 1e-138
321268079334 galactinol synthase [Solanum commersonii 0.984 0.925 0.746 1e-138
>gi|255556498|ref|XP_002519283.1| conserved hypothetical protein [Ricinus communis] gi|223541598|gb|EEF43147.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/312 (78%), Positives = 274/312 (87%), Gaps = 1/312 (0%)

Query: 3   SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVRE 62
           +KRAYVTFLAGNGDYVKGVVGL KGLRK K+AYPL VAVLPDVP +HR+IL SQGCIVRE
Sbjct: 8   NKRAYVTFLAGNGDYVKGVVGLAKGLRKTKTAYPLVVAVLPDVPEEHRQILESQGCIVRE 67

Query: 63  IQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYL 122
           I+PVYPPENQTQFAMAYYVINYSKLRIWEFVEY KMIYLDGDIQVFENIDHLF+ P+GYL
Sbjct: 68  IEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFENIDHLFDSPSGYL 127

Query: 123 YAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSH 182
           YA MDCFCE+TWS SPQYKIGYCQQCPE+V+WP  MG PPP YFNAGMF++EPNLLTY  
Sbjct: 128 YAVMDCFCEQTWSYSPQYKIGYCQQCPERVQWPKEMGLPPPLYFNAGMFLFEPNLLTYDD 187

Query: 183 LLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCA 242
           LLET+KVTPP+ FAEQDFLN FF+++YKPI   YN VLAMLWRHPE+VE EKVKVVHYCA
Sbjct: 188 LLETVKVTPPTLFAEQDFLNKFFKDVYKPIPPVYNLVLAMLWRHPENVEFEKVKVVHYCA 247

Query: 243 SGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDNAKLNLLIEVLDDDD 302
           +G+KPWRYTGKEENMDREDIKMLVKKW DIYED+SLDYKN    D  KL  +I  L +++
Sbjct: 248 AGAKPWRYTGKEENMDREDIKMLVKKWWDIYEDESLDYKNAMAADQEKLGPIIAALTEEE 307

Query: 303 AITKPKKAPSAA 314
            + + + APSAA
Sbjct: 308 VVHQ-RSAPSAA 318

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224108808|ref|XP_002314975.1| predicted protein [Populus trichocarpa] gi|222864015|gb|EEF01146.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255542966|ref|XP_002512546.1| conserved hypothetical protein [Ricinus communis] gi|223548507|gb|EEF49998.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|146747227|gb|ABQ44212.1| galactinol synthase [Capsicum annuum] Back     alignment and taxonomy information
>gi|350534726|ref|NP_001234668.1| galactinol synthase 2 [Solanum lycopersicum] gi|403399401|sp|C7G304.1|GOLS2_SOLLC RecName: Full=Galactinol synthase 2; Short=GolS-2; Short=SlGolS2 gi|256542214|dbj|BAH98060.1| galactinol synthase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|15223567|ref|NP_176053.1| galactinol synthase 2 [Arabidopsis thaliana] gi|75173054|sp|Q9FXB2.1|GOLS2_ARATH RecName: Full=Galactinol synthase 2; Short=AtGolS2; Short=GolS-2 gi|9954752|gb|AAG09103.1|AC009323_14 Putative galactinol synthase [Arabidopsis thaliana] gi|15215762|gb|AAK91426.1| At1g56600/F25P12_16 [Arabidopsis thaliana] gi|16323314|gb|AAL15412.1| At1g56600/F25P12_16 [Arabidopsis thaliana] gi|17298125|dbj|BAB78531.1| galactinol synthase [Arabidopsis thaliana] gi|332195292|gb|AEE33413.1| galactinol synthase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255542968|ref|XP_002512547.1| conserved hypothetical protein [Ricinus communis] gi|223548508|gb|EEF49999.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|147822236|emb|CAN66209.1| hypothetical protein VITISV_035072 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147792295|emb|CAN74708.1| hypothetical protein VITISV_018010 [Vitis vinifera] Back     alignment and taxonomy information
>gi|321268079|gb|ADW78842.1| galactinol synthase [Solanum commersonii] gi|321268081|gb|ADW78843.1| galactinol synthase [Solanum commersonii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
TAIR|locus:2027549335 GolS2 "galactinol synthase 2" 0.987 0.925 0.702 1.2e-120
TAIR|locus:2062860344 GolS1 "AT2G47180" [Arabidopsis 0.990 0.904 0.691 1.1e-117
TAIR|locus:2012320334 GolS3 "galactinol synthase 3" 0.990 0.931 0.659 5.8e-114
TAIR|locus:2136829336 GolS6 "galactinol synthase 6" 0.987 0.922 0.652 2.9e-112
UNIPROTKB|Q9XGN4333 GOLS1 "Galactinol synthase 1" 0.993 0.936 0.640 9.7e-112
TAIR|locus:2036576334 GolS4 "galactinol synthase 4" 0.980 0.922 0.655 4.2e-111
TAIR|locus:2172848333 GolS5 "AT5G23790" [Arabidopsis 0.987 0.930 0.640 2.6e-109
UNIPROTKB|Q9XGN3292 GOLS2 "Galactinol synthase 2" 0.907 0.976 0.681 1.5e-108
TAIR|locus:2145855328 GolS10 "galactinol synthase 10 0.942 0.902 0.645 1.1e-105
TAIR|locus:2195668332 GolS7 "galactinol synthase 7" 0.885 0.837 0.652 1.6e-102
TAIR|locus:2027549 GolS2 "galactinol synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
 Identities = 222/316 (70%), Positives = 249/316 (78%)

Query:     4 KRAYVTFLAGNGDYXXXXXXXXXXXRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREI 63
             KRAYVTFLAG GDY           RKAKS YPL VAVLPDVP DHRK LV QGC+V+EI
Sbjct:    21 KRAYVTFLAGTGDYVKGVVGLAKGLRKAKSKYPLVVAVLPDVPEDHRKQLVDQGCVVKEI 80

Query:    64 QPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLY 123
             +PVYPPENQT+FAMAYYVINYSKLRIWEFVEY KMIYLDGDIQVF+NIDHLF+LPNG  Y
Sbjct:    81 EPVYPPENQTEFAMAYYVINYSKLRIWEFVEYNKMIYLDGDIQVFDNIDHLFDLPNGQFY 140

Query:   124 AAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWP-ASMGSPPPKYFNAGMFVYEPNLLTYSH 182
             A MDCFCEKTWS+SPQYKIGYCQQCP+KV WP A +G  PP YFNAGMFVYEPNL TY +
Sbjct:   141 AVMDCFCEKTWSHSPQYKIGYCQQCPDKVTWPEAKLGPKPPLYFNAGMFVYEPNLSTYHN 200

Query:   183 LLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPXXXXXXXXXXXXYCA 242
             LLET+K+ PP+ FAEQDFLN +F++IYKPI   YN VLAMLWRHP            YCA
Sbjct:   201 LLETVKIVPPTLFAEQDFLNMYFKDIYKPIPPVYNLVLAMLWRHPENIELDQVKVVHYCA 260

Query:   243 SGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDNAK----LNLLIEVL 298
             +G+KPWR+TG+EENMDREDIKMLVKKW DIY D+SLDYKN+ + D+ K    L   IE L
Sbjct:   261 AGAKPWRFTGEEENMDREDIKMLVKKWWDIYNDESLDYKNVVIGDSHKKQQTLQQFIEAL 320

Query:   299 DDDDAITKPKKAPSAA 314
              +  A+ +  KAPSAA
Sbjct:   321 SEAGAL-QYVKAPSAA 335
GO:0005634 "nucleus" evidence=ISM
GO:0016051 "carbohydrate biosynthetic process" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009651 "response to salt stress" evidence=IEP;IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0047216 "inositol 3-alpha-galactosyltransferase activity" evidence=IDA
GO:0006012 "galactose metabolic process" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IEP
GO:0009409 "response to cold" evidence=IMP
TAIR|locus:2062860 GolS1 "AT2G47180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012320 GolS3 "galactinol synthase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136829 GolS6 "galactinol synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9XGN4 GOLS1 "Galactinol synthase 1" [Ajuga reptans (taxid:38596)] Back     alignment and assigned GO terms
TAIR|locus:2036576 GolS4 "galactinol synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172848 GolS5 "AT5G23790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9XGN3 GOLS2 "Galactinol synthase 2" [Ajuga reptans (taxid:38596)] Back     alignment and assigned GO terms
TAIR|locus:2145855 GolS10 "galactinol synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195668 GolS7 "galactinol synthase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
C7G304GOLS2_SOLLC2, ., 4, ., 1, ., 1, 2, 30.74440.99040.9201N/Ano
O80518GOLS3_ARATH2, ., 4, ., 1, ., 1, 2, 30.70620.99040.9311nono
Q9FXB2GOLS2_ARATH2, ., 4, ., 1, ., 1, 2, 30.75150.99360.9313yesno
Q947G8GOLS1_SOLLC2, ., 4, ., 1, ., 1, 2, 30.650.85350.8427N/Ano
O22693GOLS4_ARATH2, ., 4, ., 1, ., 1, 2, 30.71510.98080.9221nono
O22893GOLS1_ARATH2, ., 4, ., 1, ., 1, 2, 30.78150.92990.8488nono
Q4PSY4GOLS7_ARATH2, ., 4, ., 1, ., 1, 2, 30.71320.88530.8373nono
Q9XGN4GOLS1_AJURE2, ., 4, ., 1, ., 1, 2, 30.70030.99360.9369N/Ano
Q9XGN3GOLS2_AJURE2, ., 4, ., 1, ., 1, 2, 30.71330.92991.0N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.186LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_X000590
galactinol synthase (EC-2.4.1.123) (325 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
PLN00176333 PLN00176, PLN00176, galactinol synthase 0.0
cd02537240 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 7e-85
pfam01501248 pfam01501, Glyco_transf_8, Glycosyl transferase fa 9e-57
cd00505246 cd00505, Glyco_transf_8, Members of glycosyltransf 9e-15
cd04194248 cd04194, GT8_A4GalT_like, A4GalT_like proteins cat 2e-13
COG1442325 COG1442, RfaJ, Lipopolysaccharide biosynthesis pro 2e-10
cd06914278 cd06914, GT8_GNT1, GNT1 is a fungal enzyme that be 5e-07
COG5597368 COG5597, COG5597, Alpha-N-acetylglucosamine transf 3e-06
>gnl|CDD|215090 PLN00176, PLN00176, galactinol synthase Back     alignment and domain information 
 Score =  634 bits (1638), Expect = 0.0
 Identities = 248/314 (78%), Positives = 271/314 (86%), Gaps = 3/314 (0%)

Query: 3   SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVRE 62
           +KRAYVTFLAGNGDYVKGVVGL KGLRK KSAYPL VAVLPDVP +HR+ILVSQGCIVRE
Sbjct: 21  AKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVRE 80

Query: 63  IQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYL 122
           I+PVYPPENQTQFAMAYYVINYSKLRIWEFVEY+KMIYLDGDIQVFENIDHLF+LP+GY 
Sbjct: 81  IEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYF 140

Query: 123 YAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSH 182
           YA MDCFCEKTWS++PQYKIGYCQQCP+KV WPA +G PPP YFNAGMFV+EP+L TY  
Sbjct: 141 YAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGPPPPLYFNAGMFVFEPSLSTYED 200

Query: 183 LLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCA 242
           LLETLK+TPP+ FAEQDFLN FFR+IYKPI   YN VLAMLWRHPE+VE +KVKVVHYCA
Sbjct: 201 LLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPENVELDKVKVVHYCA 260

Query: 243 SGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAMDDN--AKLNLLIEVLDD 300
           +GSKPWRYTGKEENMDREDIKMLVKKW DIY D+SLDYKN    D    KL   I  L +
Sbjct: 261 AGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYKNFVPADEEEVKLQPFIAALSE 320

Query: 301 DDAITKPKKAPSAA 314
              ++    APSAA
Sbjct: 321 AGVVSYV-PAPSAA 333

Length = 333
>gnl|CDD|133018 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8 Back     alignment and domain information
>gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|133064 cd06914, GT8_GNT1, GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>gnl|CDD|227884 COG5597, COG5597, Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 314
PLN00176333 galactinol synthase 100.0
cd02537240 GT8_Glycogenin Glycogenin belongs the GT 8 family 100.0
cd00505246 Glyco_transf_8 Members of glycosyltransferase fami 100.0
cd06914278 GT8_GNT1 GNT1 is a fungal enzyme that belongs to t 100.0
PRK15171334 lipopolysaccharide 1,3-galactosyltransferase; Prov 100.0
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 100.0
cd06431280 GT8_LARGE_C LARGE catalytic domain has closest hom 100.0
COG1442325 RfaJ Lipopolysaccharide biosynthesis proteins, LPS 100.0
PF01501250 Glyco_transf_8: Glycosyl transferase family 8; Int 100.0
cd06429257 GT8_like_1 GT8_like_1 represents a subfamily of GT 100.0
PLN02523559 galacturonosyltransferase 99.96
cd06430304 GT8_like_2 GT8_like_2 represents a subfamily of GT 99.95
PLN02718603 Probable galacturonosyltransferase 99.95
cd06432248 GT8_HUGT1_C_like The C-terminal domain of HUGT1-li 99.95
PLN02867535 Probable galacturonosyltransferase 99.94
PLN02769629 Probable galacturonosyltransferase 99.93
PLN02659534 Probable galacturonosyltransferase 99.93
PLN02870533 Probable galacturonosyltransferase 99.92
PLN02742534 Probable galacturonosyltransferase 99.92
PLN02829639 Probable galacturonosyltransferase 99.91
PLN02910657 polygalacturonate 4-alpha-galacturonosyltransferas 99.9
COG5597368 Alpha-N-acetylglucosamine transferase [Cell envelo 99.77
KOG1950369 consensus Glycosyl transferase, family 8 - glycoge 99.29
PF03407212 Nucleotid_trans: Nucleotide-diphospho-sugar transf 98.28
PF11051271 Mannosyl_trans3: Mannosyltransferase putative; Int 98.19
KOG18791470 consensus UDP-glucose:glycoprotein glucosyltransfe 96.79
PLN03182429 xyloglucan 6-xylosyltransferase; Provisional 95.32
PF05637239 Glyco_transf_34: galactosyl transferase GMA12/MNN1 94.99
KOG1928409 consensus Alpha-1,4-N-acetylglucosaminyltransferas 92.34
PF07801142 DUF1647: Protein of unknown function (DUF1647); In 92.17
PLN03181453 glycosyltransferase; Provisional 88.73
cd02515271 Glyco_transf_6 Glycosyltransferase family 6 compri 88.05
KOG4748364 consensus Subunit of Golgi mannosyltransferase com 83.16
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 80.78
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 80.35
>PLN00176 galactinol synthase Back     alignment and domain information 
Probab=100.00  E-value=4e-66  Score=471.84  Aligned_cols=311  Identities=79%  Similarity=1.381  Sum_probs=277.5

Q ss_pred             CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccc
Q 037698            3 SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVI   82 (314)
Q Consensus         3 ~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~   82 (314)
                      +++||||+|++|++|++|++||++||+++++.++++|++++++++++++.|++.|+.+++|+++.+++++.++..+++..
T Consensus        21 ~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~~~i  100 (333)
T PLN00176         21 AKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAYYVI  100 (333)
T ss_pred             CceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccchhhh
Confidence            58999999999999999999999999999999999999999999999999999999999999887766555565556678


Q ss_pred             ccchhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCCCCC
Q 037698           83 NYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPP  162 (314)
Q Consensus        83 ~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~  162 (314)
                      +|+||++|++++|+||||||+|+||++|||+||+++.+.+|||.||+|+..++++|++.+++|+.+|++++||..+|.++
T Consensus       101 ~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~~~  180 (333)
T PLN00176        101 NYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGPPP  180 (333)
T ss_pred             hhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhccCCC
Confidence            89999999999999999999999999999999999777799999999998899999999999999998999997777666


Q ss_pred             CCcccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHccCceecCCcccccccccccCCCCCCCCCeEEEEeeC
Q 037698          163 PKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCA  242 (314)
Q Consensus       163 ~~yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~IiHf~g  242 (314)
                      ..|||||||||+|+..+++++++.+.......|+|||+||.+|.++|..||.+||++..+.|++++.|+.++++||||+|
T Consensus       181 ~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~~~~~~~~vkIIHY~~  260 (333)
T PLN00176        181 PLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPENVELDKVKVVHYCA  260 (333)
T ss_pred             CCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhChhhcccCCcEEEEeeC
Confidence            78999999999999999999999987665678999999999999999999999999988888888888888999999996


Q ss_pred             CCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhccccccchhh--hhhhhhhhhhhhcccCCCccccccCCCCC
Q 037698          243 SGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAM--DDNAKLNLLIEVLDDDDAITKPKKAPSAA  314 (314)
Q Consensus       243 ~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (314)
                      +..|||+..+.++++++++...+.++||.+|+++..++++...  .+...+++++..+.....+ +--.|||||
T Consensus       261 ~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  333 (333)
T PLN00176        261 AGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYKNFVPADEEEVKLQPFIAALSEAGVV-SYVPAPSAA  333 (333)
T ss_pred             CCCCCCCCCCcccCCChHHHHHHHHHHHHHhccccccccccccccccccccchhhhhccccccc-ccccCCCCC
Confidence            3579999998888999999999999999999999999986553  4556677888888766543 334589987

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>PLN02523 galacturonosyltransferase Back     alignment and domain information
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>PLN02718 Probable galacturonosyltransferase Back     alignment and domain information
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>PLN02867 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02769 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02659 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02870 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02742 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02829 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] Back     alignment and domain information
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose Back     alignment and domain information
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif Back     alignment and domain information
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function Back     alignment and domain information
>PLN03181 glycosyltransferase; Provisional Back     alignment and domain information
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens Back     alignment and domain information
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
1zcy_A353 Apo Form Of A Mutant Of Glycogenin In Which Asp159 1e-11
3usq_A291 Structure Of D159sY194F GLYCOGENIN MUTANT TRUNCATED 2e-11
1zcv_A353 Apo Form Of A Mutant Of Glycogenin In Which Asp159 3e-11
1ll2_A333 Crystal Structure Of Rabbit Muscle Glycogenin Compl 4e-11
1ll0_A339 Crystal Structure Of Rabbit Muscle Glycogenin Lengt 4e-11
3v8y_A291 Structure Of Apo-Glycogenin Truncated At Residue 27 5e-11
1zct_A290 Structure Of Glycogenin Truncated At Residue 270 In 6e-11
1zcu_A353 Apo Form Of The 162s Mutant Of Glycogenin Length = 6e-11
3usr_A291 Structure Of Y194f Glycogenin Mutant Truncated At R 6e-11
3v90_A291 Structure Of T82m Glycogenin Mutant Truncated At Re 9e-11
3u2t_A284 Crystal Structure Of Human Glycogenin-1 (Gyg1) Comp 9e-10
3t7m_A263 Crystal Structure Of Human Glycogenin-1 (Gyg1) Comp 1e-09
3q4s_A263 Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo 1e-09
3rmw_A263 Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m 2e-09
>pdb|1ZCY|A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Ser Length = 353 Back     alignment and structure 
Iteration: 1

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 97/257 (37%), Gaps = 43/257 (16%)
Query: 3   SKRAYVTFLAGNGDYXXXXXXXXXXXRKAKSAYPLAVAVLPDVPADHRKIL--VSQGCIV 60
           + +A+VT L  N  Y           ++ +++  LAV   P V    RK L  V    I 
Sbjct: 22  TDQAFVT-LTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVIT 80
Query: 61  REIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNG 120
            +I       + T        +  +KL  W   +Y+K +++D D  V  NID LFE    
Sbjct: 81  VDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREE- 139
Query: 121 YLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTY 180
            L AA D          P +                      P  FN+G+FVY+P++ TY
Sbjct: 140 -LSAAPD----------PGW----------------------PDCFNSGVFVYQPSVETY 166
Query: 181 SHLLETLKVTPPSSFAEQDFLNNFFR-----NIYKPISHTYNFVLAMLWRH-PXXXXXXX 234
           + LL         S  +Q  LN FF      +I K +   YN     ++ + P       
Sbjct: 167 NQLLHVASEQGSFSGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGA 226
Query: 235 XXXXXYCASGSKPWRYT 251
                +    +KPW YT
Sbjct: 227 NAKVVHFLGQTKPWNYT 243
>pdb|3USQ|A Chain A, Structure Of D159sY194F GLYCOGENIN MUTANT TRUNCATED AT RESIDUE 270 Length = 291 Back     alignment and structure
>pdb|1ZCV|A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn Length = 353 Back     alignment and structure
>pdb|1LL2|A Chain A, Crystal Structure Of Rabbit Muscle Glycogenin Complexed With Udp- Glucose And Manganese Length = 333 Back     alignment and structure
>pdb|1LL0|A Chain A, Crystal Structure Of Rabbit Muscle Glycogenin Length = 339 Back     alignment and structure
>pdb|3V8Y|A Chain A, Structure Of Apo-Glycogenin Truncated At Residue 270 Length = 291 Back     alignment and structure
>pdb|1ZCT|A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp Length = 290 Back     alignment and structure
>pdb|1ZCU|A Chain A, Apo Form Of The 162s Mutant Of Glycogenin Length = 353 Back     alignment and structure
>pdb|3USR|A Chain A, Structure Of Y194f Glycogenin Mutant Truncated At Residue 270 Length = 291 Back     alignment and structure
>pdb|3V90|A Chain A, Structure Of T82m Glycogenin Mutant Truncated At Residue 270 Length = 291 Back     alignment and structure
>pdb|3U2T|A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese Length = 284 Back     alignment and structure
>pdb|3T7M|A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese And Udp, In A Triclinic Closed Form Length = 263 Back     alignment and structure
>pdb|3Q4S|A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form Length = 263 Back     alignment and structure
>pdb|3RMW|A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose Length = 263 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 3e-48
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 2e-47
3tzt_A276 Glycosyl transferase family 8; structural genomics 2e-13
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 2e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Length = 333 Back     alignment and structure
 Score =  163 bits (413), Expect = 3e-48
 Identities = 74/297 (24%), Positives = 112/297 (37%), Gaps = 53/297 (17%)

Query: 3   SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVRE 62
           + +A+VT L  N  Y KG + L   L++ +++  LAV   P V    RK L      V  
Sbjct: 2   TDQAFVT-LTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVIT 60

Query: 63  IQPVYPP--ENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNG 120
           +  +      + T        +  +KL  W   +Y+K +++D D  V  NID LFE    
Sbjct: 61  VDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFERE-- 118

Query: 121 YLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTY 180
            L AA D                                   P  FN+G+FVY+P++ TY
Sbjct: 119 ELSAAPDPG--------------------------------WPDCFNSGVFVYQPSVETY 146

Query: 181 SHLLETLKVTPPSSFAEQDFLNNFFRN-----IYKPISHTYNFVLAMLWRHPEHVET--E 233
           + LL            +Q  LN FF +     I K +   YN     ++ +    +    
Sbjct: 147 NQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGA 206

Query: 234 KVKVVHYCASGSKPWRYT----GKEENMDREDIKM----LVKKWKDIYEDKSLDYKN 282
             KVVH+    +KPW YT     K    +  D  M     +  W DI+    +    
Sbjct: 207 NAKVVHFLGQ-TKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSVVPLLQ 262
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Length = 263 Back     alignment and structure
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276 Back     alignment and structure
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 100.0
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 100.0
3tzt_A276 Glycosyl transferase family 8; structural genomics 100.0
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 100.0
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Back     alignment and structure
Probab=100.00  E-value=7.9e-49  Score=350.32  Aligned_cols=243  Identities=28%  Similarity=0.470  Sum_probs=199.0

Q ss_pred             CCCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCc--hhhhhhcc
Q 037698            2 SSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPEN--QTQFAMAY   79 (314)
Q Consensus         2 ~~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~--~~~~~~~~   79 (314)
                      |+++||||+ ++|++|+++++|+++||+++++++++++|++++++++.++.|++.+.+++.|+.+..+..  ...+..++
T Consensus         2 ~~~~AyvTl-~td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~   80 (263)
T 3u2u_A            2 MTDQAFVTL-TTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPE   80 (263)
T ss_dssp             TTTEEEEEE-ESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTT
T ss_pred             CcceEEEEE-EECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcc
Confidence            468999995 579999999999999999999999999999999999999999999999999988765421  12223344


Q ss_pred             cccccchhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCC
Q 037698           80 YVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMG  159 (314)
Q Consensus        80 ~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g  159 (314)
                      +..+|+||++|++++||||||||+|++|++||++||+++  .+||++|.                        +||    
T Consensus        81 ~~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~--~~aA~~d~------------------------~~~----  130 (263)
T 3u2u_A           81 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDRE--ELSAAPDP------------------------GWP----  130 (263)
T ss_dssp             GGGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEECT------------------------TST----
T ss_pred             hhHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCC--cceEeccC------------------------CCC----
Confidence            678999999999999999999999999999999999997  48888752                        332    


Q ss_pred             CCCCCcccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHcc-----CceecCCcccccccccccCCCCCC--C
Q 037698          160 SPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRN-----IYKPISHTYNFVLAMLWRHPEHVE--T  232 (314)
Q Consensus       160 ~~~~~yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~-----~~~~Lp~~yN~~~~~~~~~~~~~~--~  232 (314)
                          .|||||||||+|+..+++++++.+.+..++.++|||+||.+|.+     .++.||.+||++....|.+...+.  .
T Consensus       131 ----~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~  206 (263)
T 3u2u_A          131 ----DCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFG  206 (263)
T ss_dssp             ----TSEEEEEEEECCCHHHHHHHHHHHHHHCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHG
T ss_pred             ----ccccCeEEEEcccHHHHHHHHHHHHhcCCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhc
Confidence                69999999999999999999999876666788999999999987     789999999999865554432222  5


Q ss_pred             CCeEEEEeeCCCCCCCCcCCCCCC--------CChhhhHHHHHHHHHHHhhccccc
Q 037698          233 EKVKVVHYCASGSKPWRYTGKEEN--------MDREDIKMLVKKWKDIYEDKSLDY  280 (314)
Q Consensus       233 ~~~~IiHf~g~~~KPW~~~~~~~~--------~~~~~~~~~~~~Ww~~~~~~~~~~  280 (314)
                      ++++||||+| ..|||+.......        .....+..+.++||..|.+..+..
T Consensus       207 ~~~~IIHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~~~~~~~~~~  261 (263)
T 3u2u_A          207 ASAKVVHFLG-RVKPWNYTYDPKTKSVKSEAHDPNMTHPEFLILWWNIFTTNVLPL  261 (263)
T ss_dssp             GGCSEEECCS-SSCGGGSEEETTTTEEECCSSCGGGSSTHHHHHHHHHHHHHTGGG
T ss_pred             CCeEEEEECC-CCcCCCCCCCCCCCcccccCCCcchhHHHHHHHHHHHHHhhcCcC
Confidence            7899999999 8999987532111        011113688999999999866543
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Back     alignment and structure
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 Back     alignment and structure
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 314
d1ll2a_263 c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun 6e-43
d1ga8a_282 c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri 1e-14
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycogenin
domain: Glycogenin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  146 bits (369), Expect = 6e-43
 Identities = 71/291 (24%), Positives = 109/291 (37%), Gaps = 53/291 (18%)

Query: 3   SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVRE 62
           + +A+VT L  N  Y KG + L   L++ +++  LAV   P V    RK L      V  
Sbjct: 2   TDQAFVT-LTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVIT 60

Query: 63  IQPVYPP--ENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNG 120
           +  +      + T        +  +KL  W   +Y+K +++D D  V  NID LFE    
Sbjct: 61  VDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREE- 119

Query: 121 YLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTY 180
                                              A+     P  FN+G+FVY+P++ TY
Sbjct: 120 ---------------------------------LSAAPDPGWPDCFNSGVFVYQPSVETY 146

Query: 181 SHLLETLKVTPPSSFAEQDFLNNFFRN-----IYKPISHTYNFVLAMLWRHPEHVE--TE 233
           + LL            +Q  LN FF +     I K +   YN     ++ +    +    
Sbjct: 147 NQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGA 206

Query: 234 KVKVVHYCASGSKPWRYT----GKEENMDREDIKM----LVKKWKDIYEDK 276
             KVVH+    +KPW YT     K    +  D  M     +  W DI+   
Sbjct: 207 NAKVVHFLG-QTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTS 256
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
d1ll2a_263 Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 100.0
d1ga8a_282 Galactosyltransferase LgtC {Neisseria meningitidis 100.0
d1o7qa_287 alpha-1,3-galactosyltransferase catalytic domain { 95.94
d1lzia_283 Glycosyltransferase A catalytic domain {Human (Hom 94.04
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycogenin
domain: Glycogenin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-43  Score=316.40  Aligned_cols=243  Identities=29%  Similarity=0.454  Sum_probs=192.7

Q ss_pred             CCCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchh--hhhhcc
Q 037698            2 SSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQT--QFAMAY   79 (314)
Q Consensus         2 ~~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~--~~~~~~   79 (314)
                      |+.+|||| +++|++|+++|+|+++||+++++.++++|+++++++++.++.|++.+..++.++.+..+....  .....+
T Consensus         1 ~~~~A~vt-~~t~d~Yl~~a~vl~~SL~~~~~~~~~vvl~~~~i~~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~   79 (263)
T d1ll2a_           1 MTDQAFVT-LTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPE   79 (263)
T ss_dssp             CCSEEEEE-EESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGG
T ss_pred             CCccEEEE-EEeCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHhCCcceeEEeecCcchhhhhhhcccc
Confidence            46789999 557999999999999999999999999999999999999999999999999888876553221  112235


Q ss_pred             cccccchhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCC
Q 037698           80 YVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMG  159 (314)
Q Consensus        80 ~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g  159 (314)
                      +..+|+||++|++.+||||||||||+||++||++||+.+.  ++|+.+.                        +      
T Consensus        80 ~~~ty~Kl~i~~l~~ydkvlYLDaD~lv~~~id~Lf~~~~--~~a~~~~------------------------~------  127 (263)
T d1ll2a_          80 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREE--LSAAPDP------------------------G------  127 (263)
T ss_dssp             GHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCS--SEEEECS------------------------S------
T ss_pred             chhhhHHHHHhhhcccceEEEeCCCEEEecCHHHHhcCCc--cceeccC------------------------C------
Confidence            6788999999999999999999999999999999999974  5666541                        1      


Q ss_pred             CCCCCcccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHcc-----CceecCCcccccccccccCCCCC--CC
Q 037698          160 SPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRN-----IYKPISHTYNFVLAMLWRHPEHV--ET  232 (314)
Q Consensus       160 ~~~~~yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~-----~~~~Lp~~yN~~~~~~~~~~~~~--~~  232 (314)
                        ...||||||||++|++.+++.+.+.+.+...+.++||+++|..+.+     .+..||..||+.....+.....+  ..
T Consensus       128 --~~~~~nsGv~l~~p~~~~~~~i~~~~~~~~~~~~~dq~~ln~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  205 (263)
T d1ll2a_         128 --WPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFG  205 (263)
T ss_dssp             --STTSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHG
T ss_pred             --CcccccCCcEEECccHHHHHHHHHHHHhhCCCChhhhhHHHHHHHhhhccCcccccCHHHhhhhhhhhhhhHhHHhhc
Confidence              1269999999999999999999998877766778999999999875     46678888888775444332111  25


Q ss_pred             CCeEEEEeeCCCCCCCCcCCCCC-C--C-----ChhhhHHHHHHHHHHHhhccccc
Q 037698          233 EKVKVVHYCASGSKPWRYTGKEE-N--M-----DREDIKMLVKKWKDIYEDKSLDY  280 (314)
Q Consensus       233 ~~~~IiHf~g~~~KPW~~~~~~~-~--~-----~~~~~~~~~~~Ww~~~~~~~~~~  280 (314)
                      .+++||||+| ..|||+...... .  .     .......+++.||.+|++++..+
T Consensus       206 ~~~~iIHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ww~~~~~~~~~~  260 (263)
T d1ll2a_         206 ANAKVVHFLG-QTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSVVPL  260 (263)
T ss_dssp             GGCSEEECCS-SCCGGGSCEETTTTEEC--------CCHHHHHHHHHHHHHTHHHH
T ss_pred             CCeEEEEeCC-CCCCCCCCCCCCccccccchhhccccHHHHHHHHHHHHhcccccC
Confidence            7899999999 799998653111 0  0     01123578899999999987764
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure