Citrus Sinensis ID: 037706

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCASTASAQGLHKKKT
cEEEEEEccccccEEEccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEEEEEEEEccccccccccccEEEEccccccccccEEEEcccccccHHHHHccccccEEEEcccccccccccccccEEEcccccccccccEEEEccccccccccEEEEEEEEEEccEEccccccccEEccccccccEEEEcccccEEccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEccccEEEEccccEEEEEccccccccEEEEEEEEccccccccEEEEccEEEEEEEEEEEccccEEEEEccccccHHcccccccccc
cEEEEEEccccEEEEEccccccccHHHcccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccEEEEEEccccccccEEEEEEEEEccccccccEEcccEEEEccccccccccEEEEcccccccHHHHHHHccccEEEEEcccccccccccccEEEEcccccccccccEEcccccccccccEEEEEEEEEEEccEEEccccHHHEEEccccccEEEEEcccEEEcccHHHHHHHHHHHHHHHccccccccccccccccccEcccccccccccccccEEEEEEccccEEEcccccEEEEEcccccccEEEEEEEEcccccccccEEEEEEEEEccEEEEEEccccEEccccccHHHHHHHHccccccc
viqvymdtgsdltwvpcgnlsfdcmdcddyrnnklmsnfspsrsssssrdtcassfclnihssdnpfdpctmsgcslstllkstccrpcpsfaytygegglvtgiltrdtlkvhgsspgiireipkfcfgcvgstyrepigiagfgrgalsvpsqlgflqkgfSHCFLafkyandpnissplvigdvaisskdnlqftpmlkspmypnyyyIGLEAItignssltevplslrefdsqgnggllvdsgttythlpepfYSQLLSILQSTITyyprakeveertgfdlcyrvpcpnntftddlfpsitfhflnnvslvlpqgnhfyamsapsnssaVKCLLFqsmddgdygpsgvfgsfqqQNVEVVYDLEKerigfqpmdcastasaqglhkkkt
viqvymdtgsdltwvpcGNLSFDCMDCDDYRNNKLMSNfspsrsssssRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHgsspgiireipKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIgfqpmdcastasaqglhkkkt
VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMsnfspsrsssssrdtcassFCLNIHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCASTASAQGLHKKKT
***VYMDTGSDLTWVPCGNLSFDCMDCDDYRN*********************SSFCLNIHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQ******************
VIQVYMDTGSDLTWVPCGNLSFDCMDCDD**********************CA**FCLNIHSSDN*FDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFK***********VIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTIT**********RTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCA*************
VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSN**************ASSFCLNIHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCA*************
VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYR*N*LMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCASTASAQGL*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCASTASAQGLHKKKT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query394 2.2.26 [Sep-21-2011]
Q766C2438 Aspartic proteinase nepen N/A no 0.817 0.735 0.301 2e-29
Q766C3437 Aspartic proteinase nepen N/A no 0.814 0.734 0.300 1e-27
Q6XBF8437 Aspartic proteinase CDR1 no no 0.827 0.745 0.284 1e-19
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.817 0.644 0.258 4e-19
Q9LZL3453 Aspartic proteinase PCS1 no no 0.885 0.770 0.264 8e-19
Q3EBM5447 Probable aspartic proteas no no 0.847 0.747 0.297 1e-18
Q9S9K4475 Aspartic proteinase-like no no 0.822 0.682 0.258 4e-18
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.807 0.676 0.255 6e-17
Q9LX20528 Aspartic proteinase-like no no 0.807 0.602 0.241 4e-11
P13917427 Basic 7S globulin OS=Glyc no no 0.631 0.583 0.218 7e-07
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function desciption
 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 165/382 (43%), Gaps = 60/382 (15%)

Query: 6   MDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDN 65
           MDTGSDL W  C      C  C     ++    F+P  SSS S   C S +C      D 
Sbjct: 113 MDTGSDLIWTQC----EPCTQC----FSQPTPIFNPQDSSSFSTLPCESQYC-----QDL 159

Query: 66  PFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIP 125
           P + C  + C                + Y YG+G    G +  +T     SS      +P
Sbjct: 160 PSETCNNNECQ---------------YTYGYGDGSTTQGYMATETFTFETSS------VP 198

Query: 126 KFCFGC----VGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSP 181
              FGC     G       G+ G G G LS+PSQLG  Q  FS+C  ++  ++     S 
Sbjct: 199 NIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLGVGQ--FSYCMTSYGSSS----PST 252

Query: 182 LVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGG 241
           L +G  A    +    T ++ S + P YYYI L+ IT+G  +L  +P S  +    G GG
Sbjct: 253 LALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLG-IPSSTFQLQDDGTGG 311

Query: 242 LLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDL 301
           +++DSGTT T+LP+  Y+ +       I   P     E  +G   C++ P   +T     
Sbjct: 312 MIIDSGTTLTYLPQDAYNAVAQAFTDQIN-LPTVD--ESSSGLSTCFQQPSDGSTVQ--- 365

Query: 302 FPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQN 361
            P I+  F   V L L + N        S +  V CL   S      G S +FG+ QQQ 
Sbjct: 366 VPEISMQFDGGV-LNLGEQNILI-----SPAEGVICLAMGS--SSQLGIS-IFGNIQQQE 416

Query: 362 VEVVYDLEKERIGFQPMDCAST 383
            +V+YDL+   + F P  C ++
Sbjct: 417 TQVLYDLQNLAVSFVPTQCGAS 438
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
255550723416 pepsin A, putative [Ricinus communis] gi 0.992 0.939 0.819 0.0
224136436486 predicted protein [Populus trichocarpa] 0.989 0.802 0.811 0.0
224115494483 predicted protein [Populus trichocarpa] 0.989 0.807 0.785 0.0
296085344434 unnamed protein product [Vitis vinifera] 0.992 0.900 0.784 1e-180
359484086417 PREDICTED: aspartic proteinase nepenthes 0.992 0.937 0.784 1e-179
15242307491 aspartyl protease family protein [Arabid 0.974 0.782 0.723 1e-168
297794789419 hypothetical protein ARALYDRAFT_494467 [ 0.974 0.916 0.718 1e-165
449455475449 PREDICTED: aspartic proteinase nepenthes 0.992 0.870 0.691 1e-159
125552953429 hypothetical protein OsI_20585 [Oryza sa 0.964 0.885 0.570 1e-123
297724243432 Os05g0511050 [Oryza sativa Japonica Grou 0.964 0.879 0.558 1e-121
>gi|255550723|ref|XP_002516410.1| pepsin A, putative [Ricinus communis] gi|223544445|gb|EEF45965.1| pepsin A, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/394 (81%), Positives = 354/394 (89%), Gaps = 3/394 (0%)

Query: 1   VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNI 60
           VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYRN+KLMS FSPS SSSS RD+CAS +C +I
Sbjct: 24  VIQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNSKLMSAFSPSHSSSSYRDSCASPYCTDI 83

Query: 61  HSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGI 120
           HSSDN FDPCT++GCSLSTL+K+TC RPCPSFAYTYG GG+VTG LTRDTL+VH     +
Sbjct: 84  HSSDNSFDPCTVAGCSLSTLIKATCARPCPSFAYTYGAGGVVTGTLTRDTLRVHEGPARV 143

Query: 121 IREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISS 180
            ++IPKFCFGCVGSTY EPIGIAGF RG LS PSQLG L+KGFSHCFLAFKYAN+PNISS
Sbjct: 144 TKDIPKFCFGCVGSTYHEPIGIAGFVRGTLSFPSQLGLLKKGFSHCFLAFKYANNPNISS 203

Query: 181 PLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNG 240
           PLVIGD A+SSKDN+QFTPMLKSPMYPNYYYIGLEAIT+GN S T VPL+LREFDSQGNG
Sbjct: 204 PLVIGDTALSSKDNMQFTPMLKSPMYPNYYYIGLEAITVGNVSATTVPLNLREFDSQGNG 263

Query: 241 GLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDD 300
           G+L+DSGTTYTHLPEPFYSQLLSI ++ IT YPRA EVE R GFDLCY+VPCPNN  TDD
Sbjct: 264 GMLIDSGTTYTHLPEPFYSQLLSIFKAIIT-YPRATEVEMRAGFDLCYKVPCPNNRLTDD 322

Query: 301 --LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQ 358
             LFPSITFHFLNNVS VLPQGNHFYAMSAPSNS+ VKCLLFQSM D DYGP+GVFGSFQ
Sbjct: 323 DNLFPSITFHFLNNVSFVLPQGNHFYAMSAPSNSTVVKCLLFQSMADSDYGPAGVFGSFQ 382

Query: 359 QQNVEVVYDLEKERIGFQPMDCASTASAQGLHKK 392
           QQNV++VYDLEKERIGFQPMDCAS A +QGLH++
Sbjct: 383 QQNVQIVYDLEKERIGFQPMDCASAAVSQGLHRE 416

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224136436|ref|XP_002322329.1| predicted protein [Populus trichocarpa] gi|222869325|gb|EEF06456.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224115494|ref|XP_002332148.1| predicted protein [Populus trichocarpa] gi|222875198|gb|EEF12329.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296085344|emb|CBI29076.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484086|ref|XP_002263357.2| PREDICTED: aspartic proteinase nepenthesin-2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|15242307|ref|NP_199325.1| aspartyl protease family protein [Arabidopsis thaliana] gi|9758987|dbj|BAB09497.1| chloroplast nucleoid DNA-binding protein-like [Arabidopsis thaliana] gi|332007824|gb|AED95207.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297794789|ref|XP_002865279.1| hypothetical protein ARALYDRAFT_494467 [Arabidopsis lyrata subsp. lyrata] gi|297311114|gb|EFH41538.1| hypothetical protein ARALYDRAFT_494467 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449455475|ref|XP_004145478.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Cucumis sativus] gi|449518962|ref|XP_004166504.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|125552953|gb|EAY98662.1| hypothetical protein OsI_20585 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|297724243|ref|NP_001174485.1| Os05g0511050 [Oryza sativa Japonica Group] gi|222632192|gb|EEE64324.1| hypothetical protein OsJ_19161 [Oryza sativa Japonica Group] gi|255676482|dbj|BAH93213.1| Os05g0511050 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
TAIR|locus:2153197491 AT5G45120 [Arabidopsis thalian 0.972 0.780 0.695 8.5e-152
TAIR|locus:505006483499 AT4G16563 [Arabidopsis thalian 0.484 0.382 0.362 1.3e-53
TAIR|locus:2079919469 AT3G52500 [Arabidopsis thalian 0.893 0.750 0.307 4.8e-39
TAIR|locus:2102335452 AT3G25700 [Arabidopsis thalian 0.857 0.747 0.300 2.5e-33
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.728 0.591 0.294 1.8e-32
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.680 0.554 0.302 2.2e-31
TAIR|locus:2024306449 AT1G09750 [Arabidopsis thalian 0.720 0.632 0.273 6.3e-31
TAIR|locus:2169369455 AT5G07030 [Arabidopsis thalian 0.682 0.591 0.301 8.5e-30
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.728 0.594 0.272 2.4e-29
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.753 0.594 0.265 1.6e-27
TAIR|locus:2153197 AT5G45120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
 Identities = 279/401 (69%), Positives = 324/401 (80%)

Query:     2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMXXXXXX--XXXXXXXXXXXXXFCLN 59
             +QVY+DTGSDLTWVPCGNLSFDC++C D +NN L                      FC+ 
Sbjct:    96 VQVYLDTGSDLTWVPCGNLSFDCIECYDLKNNDLKSPSVFSPLHSSTSFRDSCASSFCVE 155

Query:    60 IHSSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPG 119
             IHSSDNPFDPC ++GCS+S LLKSTC RPCPSFAYTYGEGGL++GILTRD LK       
Sbjct:   156 IHSSDNPFDPCAVAGCSVSMLLKSTCVRPCPSFAYTYGEGGLISGILTRDILKAR----- 210

Query:   120 IIREIPKFCFGCVGSTYREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNIS 179
               R++P+F FGCV STYREPIGIAGFGRG LS+PSQLGFL+KGFSHCFL FK+ N+PNIS
Sbjct:   211 -TRDVPRFSFGCVTSTYREPIGIAGFGRGLLSLPSQLGFLEKGFSHCFLPFKFVNNPNIS 269

Query:   180 SPLVIGDVAISSK--DNLQFTPMLKSPMYPNYYYIGLEAITIG-NSSLTEVPLSLREFDS 236
             SPL++G  A+S    D+LQFTPML +PMYPN YYIGLE+ITIG N + T+VPL+LR+FDS
Sbjct:   270 SPLILGASALSINLTDSLQFTPMLNTPMYPNSYYIGLESITIGTNITPTQVPLTLRQFDS 329

Query:   237 QGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNT 296
             QGNGG+LVDSGTTYTHLPEPFYSQLL+ LQSTITY PRA E E RTGFDLCY+VPCPNN 
Sbjct:   330 QGNGGMLVDSGTTYTHLPEPFYSQLLTTLQSTITY-PRATETESRTGFDLCYKVPCPNNN 388

Query:   297 FT---DD---LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGP 350
              T   +D   +FPSITFHFLNN +L+LPQGN FYAMSAPS+ S V+CLLFQ+M+DGDYGP
Sbjct:   389 LTSLENDVMMIFPSITFHFLNNATLLLPQGNSFYAMSAPSDGSVVQCLLFQNMEDGDYGP 448

Query:   351 SGVFGSFQQQNVEVVYDLEKERIGFQPMDCASTASAQGLHK 391
             +GVFGSFQQQNV+VVYDLEKERIGFQ MDC   A++ GL++
Sbjct:   449 AGVFGSFQQQNVKVVYDLEKERIGFQAMDCVLEAASHGLNQ 489
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:505006483 AT4G16563 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079919 AT3G52500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102335 AT3G25700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024306 AT1G09750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169369 AT5G07030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_XV000869
hypothetical protein (486 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-72
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-50
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 4e-47
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 4e-34
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 4e-19
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 6e-11
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 5e-08
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 7e-08
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-06
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 0.003
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  227 bits (581), Expect = 1e-72
 Identities = 99/297 (33%), Positives = 134/297 (45%), Gaps = 64/297 (21%)

Query: 88  PCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCV----GSTYREPIGIA 143
            C S+ Y+YG+G   +G+L  +T     SS  +    P   FGC     G ++    GI 
Sbjct: 29  QCCSYEYSYGDGSSTSGVLATETFTFGDSSVSV----PNVAFGCGTDNEGGSFGGADGIL 84

Query: 144 GFGRGALSVPSQLGFLQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKS 203
           G GRG LS+ SQLG     FS+C +     +D   SSPL++GD A      + +TP++K+
Sbjct: 85  GLGRGPLSLVSQLGSTGNKFSYCLVPH---DDTGGSSPLILGDAADLGGSGVVYTPLVKN 141

Query: 204 PMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLS 263
           P  P YYY+ LE I++G   L  +P S+   DS G+GG ++DSGTT T+LP+P Y     
Sbjct: 142 PANPTYYYVNLEGISVGGKRL-PIPPSVFAIDSDGSGGTIIDSGTTLTYLPDPAY----- 195

Query: 264 ILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHF 323
                                                  P +T HF     L LP  N+F
Sbjct: 196 ---------------------------------------PDLTLHFDGGADLELPPENYF 216

Query: 324 YAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDC 380
                      V CL   S      G   + G+ QQQN  V YDLE  R+GF P DC
Sbjct: 217 V-----DVGEGVVCLAILS---SSSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 394
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.95
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.93
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.74
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.05
PF1365090 Asp_protease_2: Aspartyl protease 93.67
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 93.29
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 89.41
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 86.97
PF1365090 Asp_protease_2: Aspartyl protease 83.48
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 81.19
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.5e-57  Score=449.27  Aligned_cols=328  Identities=34%  Similarity=0.588  Sum_probs=262.1

Q ss_pred             EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706            2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL   81 (394)
Q Consensus         2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~   81 (394)
                      |.|+|||||+++||+|.    +|..|..+    .++.|||++|+||+.++|.++.|......         ..|..    
T Consensus        98 ~~vi~DTGS~l~Wv~C~----~C~~C~~~----~~~~fdps~SST~~~~~C~s~~C~~~~~~---------~~c~~----  156 (431)
T PLN03146         98 ILAIADTGSDLIWTQCK----PCDDCYKQ----VSPLFDPKKSSTYKDVSCDSSQCQALGNQ---------ASCSD----  156 (431)
T ss_pred             EEEEECCCCCcceEcCC----CCcccccC----CCCcccCCCCCCCcccCCCCcccccCCCC---------CCCCC----
Confidence            78999999999999999    89999864    47899999999999999999999765432         12321    


Q ss_pred             CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC----CcceEeecCCCCCChhhhhc
Q 037706           82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR----EPIGIAGFGRGALSVPSQLG  157 (394)
Q Consensus        82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~----~~dGIlGLg~~~~S~~~ql~  157 (394)
                          ++.|. |.+.|++|+.+.|++++|+|+|++...+ .++++++.|||+..+.+    ..+||||||+..+|+++||.
T Consensus       157 ----~~~c~-y~i~Ygdgs~~~G~l~~Dtltlg~~~~~-~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~  230 (431)
T PLN03146        157 ----ENTCT-YSYSYGDGSFTKGNLAVETLTIGSTSGR-PVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLG  230 (431)
T ss_pred             ----CCCCe-eEEEeCCCCceeeEEEEEEEEeccCCCC-cceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhh
Confidence                34588 9999999998789999999999874321 24688999999987643    37999999999999999998


Q ss_pred             c-CCCceEEeccCccCCCCCCCCccEEEcccCcCCCCCceeecCccCCCCCCceEEEeeEEEECCEEeeeecCcceeccC
Q 037706          158 F-LQKGFSHCFLAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDS  236 (394)
Q Consensus       158 ~-~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~  236 (394)
                      . +.++|||||.+..  ++....|.|+||+........+.|+|++.+.. +.+|.|.|++|+||++ .+.++...+.  .
T Consensus       231 ~~~~~~FSycL~~~~--~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~-~~~y~V~L~gIsVgg~-~l~~~~~~~~--~  304 (431)
T PLN03146        231 SSIGGKFSYCLVPLS--SDSNGTSKINFGTNAIVSGSGVVSTPLVSKDP-DTFYYLTLEAISVGSK-KLPYTGSSKN--G  304 (431)
T ss_pred             HhhCCcEEEECCCCC--CCCCCcceEEeCCccccCCCCceEcccccCCC-CCeEEEeEEEEEECCE-ECcCCccccc--c
Confidence            6 6679999997531  11235799999985322234589999986432 4689999999999999 8887665443  2


Q ss_pred             CCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCCeEEEEEeCCeEEE
Q 037706          237 QGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLV  316 (394)
Q Consensus       237 ~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~  316 (394)
                      .+.+++||||||++++||+++|++|+++|.+++... ...  .....++.||...     . ...+|+|+|+|+ |+.+.
T Consensus       305 ~~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~-~~~--~~~~~~~~C~~~~-----~-~~~~P~i~~~F~-Ga~~~  374 (431)
T PLN03146        305 VEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGE-RVS--DPQGLLSLCYSST-----S-DIKLPIITAHFT-GADVK  374 (431)
T ss_pred             CCCCcEEEeCCccceecCHHHHHHHHHHHHHHhccc-cCC--CCCCCCCccccCC-----C-CCCCCeEEEEEC-CCeee
Confidence            345689999999999999999999999999888631 111  1122467899752     1 246899999996 69999


Q ss_pred             ecCCCeEEEecCCCCCCceEEEEEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCCCcc
Q 037706          317 LPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCAS  382 (394)
Q Consensus       317 i~~~~y~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~c~~  382 (394)
                      |+|++|++...     .+.+|++++...     +.||||+.|||++|||||++++|||||+.+|..
T Consensus       375 l~~~~~~~~~~-----~~~~Cl~~~~~~-----~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        375 LQPLNTFVKVS-----EDLVCFAMIPTS-----SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             cCcceeEEEcC-----CCcEEEEEecCC-----CceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            99999998764     346899887553     369999999999999999999999999999975

>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
3vla_A413 Crystal Structure Of Edgp Length = 413 1e-11
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 1e-11
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 1e-09
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 4e-08
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 2e-07
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 1e-04
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 2e-04
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 129/309 (41%), Gaps = 56/309 (18%)
Query: 104 GILTRDTLKVH---GSSPGIIREIPKFCFGCVGSTYRE-----PIGIAGFGRGALSVPSQ 155
           G +  D + V    GSS G +  +P+F F C  ++  +      +G+AG GR  +++PSQ
Sbjct: 108 GEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQ 167
Query: 156 LG---FLQKGFSHCF-------LAFKYANDPNISSPLVIGDVAISSKDNLQFTPMLKSPM 205
                  ++ F+ C            + NDP    P +     I S   L +TP+L +P+
Sbjct: 168 FASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNI-----IVSDKTLTYTPLLTNPV 222
Query: 206 YPNY----------YYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPE 255
             +           Y+IG+++I I NS +  +  SL    S G GG  + +   YT L  
Sbjct: 223 STSATSTQGEPSVEYFIGVKSIKI-NSKIVALNTSLLSISSAGLGGTKISTINPYTVLET 281
Query: 256 PFYSQLLS--ILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNV 313
             Y  +    I +S      R   V     F  C+     +N  +  L PS+      ++
Sbjct: 282 SIYKAVTEAFIKESAARNITRVASVAP---FGACFST---DNILSTRLGPSVP-----SI 330
Query: 314 SLVLPQGNHFYAMSAPSNSSA-----VKCLLFQSMDDG-DYGPSGVFGSFQQQNVEVVYD 367
            LVL   +  + ++  SNS       V CL    +D G +   S V G  Q ++  V +D
Sbjct: 331 DLVLQSESVVWTITG-SNSMVYINDNVVCL--GVVDGGSNLRTSIVIGGHQLEDNLVQFD 387
Query: 368 LEKERIGFQ 376
           L   R+GF 
Sbjct: 388 LATSRVGFS 396
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 5e-65
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-63
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-62
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 2e-14
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 3e-14
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-12
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 2e-12
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 6e-12
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 8e-11
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-10
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-10
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 3e-10
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 7e-10
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 9e-10
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 2e-09
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-09
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-09
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 3e-09
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 4e-09
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 5e-09
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 6e-09
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 7e-09
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 1e-08
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 2e-08
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 8e-08
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 2e-06
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 3e-06
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 3e-06
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-05
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 1e-05
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 8e-05
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  212 bits (539), Expect = 5e-65
 Identities = 86/412 (20%), Positives = 139/412 (33%), Gaps = 59/412 (14%)

Query: 2   IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIH 61
             + +D G    WV C     D             S + P R  +S      S  C +  
Sbjct: 35  ENLVVDLGGRFLWVDC-----DQNYVS--------STYRPVRCRTSQCSLSGSIACGDCF 81

Query: 62  SSDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVH---GSSP 118
           +   P       GC+ +T         C  F           G +  D + V    GSS 
Sbjct: 82  NGPRP-------GCNNNT---------CGVFPENPVINTATGGEVAEDVVSVESTDGSSS 125

Query: 119 GIIREIPKFCFGCVGSTYREPI-----GIAGFGRGALSVPSQL---GFLQKGFSHCFLAF 170
           G +  +P+F F C  ++  + +     G+AG GR  +++PSQ       ++ F+ C    
Sbjct: 126 GRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS 185

Query: 171 KYANDPNI--SSPLVIGDVAISSKDNLQFTPMLKSP----------MYPNYYYIGLEAIT 218
             +N   I  + P       I S   L +TP+L +P               Y+IG+++I 
Sbjct: 186 TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIK 245

Query: 219 IGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEV 278
           I +  +  +  SL    S G GG  + +   YT L    Y  +                V
Sbjct: 246 INSKIVA-LNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAA-RNITRV 303

Query: 279 EERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL 338
                F  C+      +T      PSI     +   +    G++       +    V CL
Sbjct: 304 ASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDN----VVCL 359

Query: 339 LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCASTASAQGLH 390
                   +   S V G  Q ++  V +DL   R+GF      S  +    +
Sbjct: 360 GVVDGGS-NLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFN 410
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.64
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.59
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=6.9e-57  Score=444.19  Aligned_cols=332  Identities=23%  Similarity=0.416  Sum_probs=259.5

Q ss_pred             EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706            2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL   81 (394)
Q Consensus         2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~   81 (394)
                      |.|+|||||+++||+|.    +|                 .+|+||+.+.|.++.|......     .|.  .|....  
T Consensus        35 ~~v~~DTGS~~lWv~c~----~c-----------------~~Sst~~~v~C~s~~C~~~~~~-----~~~--~c~s~~--   84 (413)
T 3vla_A           35 ENLVVDLGGRFLWVDCD----QN-----------------YVSSTYRPVRCRTSQCSLSGSI-----ACG--DCFNGP--   84 (413)
T ss_dssp             EEEEEETTCSSEEEECS----SS-----------------CCCTTCEECBTTSHHHHHTTCC-----EEE--CCSSCC--
T ss_pred             eEEEEeCCChhhhcccC----CC-----------------CCCCCcCccCCCcccccccccC-----CCc--ccccCC--
Confidence            78999999999999998    44                 2689999999999999876543     231  122110  


Q ss_pred             CCCC-CCCCCCcEEee-cCCCeEEEEEEEEEEEeecCCCC---ceeecCcEEEecccCCC-----CCcceEeecCCCCCC
Q 037706           82 KSTC-CRPCPSFAYTY-GEGGLVTGILTRDTLKVHGSSPG---IIREIPKFCFGCVGSTY-----REPIGIAGFGRGALS  151 (394)
Q Consensus        82 ~~~~-~~~c~~~~i~Y-g~Gs~~~G~~~~D~v~l~~~~~~---~~~~~~~~~fg~~~~~~-----~~~dGIlGLg~~~~S  151 (394)
                      ...| ++.|. |.+.| ++|+.++|++++|+|+|++.++.   ..+++++++|||+..+.     ..+|||||||++.+|
T Consensus        85 ~~~c~~~~c~-~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lS  163 (413)
T 3vla_A           85 RPGCNNNTCG-VFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIA  163 (413)
T ss_dssp             BTTBCSSEEE-ECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSS
T ss_pred             CCCCCCCcCc-ceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcc
Confidence            1123 45688 99999 58887779999999999853322   12678899999998752     247999999999999


Q ss_pred             hhhhhcc---CCCceEEeccCccCCCCCCCCccEEEcccCcC------CCCC-ceeecCccCCCCC----------CceE
Q 037706          152 VPSQLGF---LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS------SKDN-LQFTPMLKSPMYP----------NYYY  211 (394)
Q Consensus       152 ~~~ql~~---~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~------~~~~-~~~~p~~~~~~~~----------~~y~  211 (394)
                      ++.||..   ++++|||||.+.     ...+|.|+||++|..      +.++ +.|+||+.++..+          .+|.
T Consensus       164 l~sql~~~~~i~~~FS~cL~~~-----~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~  238 (413)
T 3vla_A          164 LPSQFASAFSFKRKFAMCLSGS-----TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYF  238 (413)
T ss_dssp             HHHHHHHHHTCCSEEEEECCSC-----SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCE
T ss_pred             hHHHHhhhcCCCceEEEeCCCC-----CCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEE
Confidence            9999986   579999999973     246899999999863      3567 9999999875332          6899


Q ss_pred             EEeeEEEECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhc--cCCCCcccccccCCCCccC
Q 037706          212 IGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTIT--YYPRAKEVEERTGFDLCYR  289 (394)
Q Consensus       212 v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~--~~~~~~~~~~~~~~~~C~~  289 (394)
                      |.|++|+||++ .+.++...+.+.+.+.+++||||||++++||+++|++|+++|.+++.  .+.+.   +....+..||.
T Consensus       239 V~l~~IsVgg~-~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~---~~~~~~~~C~~  314 (413)
T 3vla_A          239 IGVKSIKINSK-IVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV---ASVAPFGACFS  314 (413)
T ss_dssp             ECCCEEEETTE-EECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE---CCCTTCSCEEE
T ss_pred             EEEEEEEECCE-EccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC---CCCCCCcceec
Confidence            99999999999 99888777766655678899999999999999999999999998764  22221   12234679998


Q ss_pred             CCCCCCCCCCCCCCeEEEEEeC-CeEEEecCCCeEEEecCCCCCCceEEEEEEeCCCCCCCCceeecccceeeeEEEEeC
Q 037706          290 VPCPNNTFTDDLFPSITFHFLN-NVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDL  368 (394)
Q Consensus       290 ~~~~~~~~~~~~~P~i~f~f~g-g~~~~i~~~~y~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~  368 (394)
                      .++...+.....+|+|+|+|+| ++.|+|++++|+++..     .+..|++|+..... .++.||||++|||++|+|||+
T Consensus       315 ~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-----~~~~Cl~~~~~~~~-~~~~~IlGd~fl~~~~vvfD~  388 (413)
T 3vla_A          315 TDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-----DNVVCLGVVDGGSN-LRTSIVIGGHQLEDNLVQFDL  388 (413)
T ss_dssp             CTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-----TTEEEECEEEEESS-CSSSEEECHHHHTTEEEEEET
T ss_pred             cCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-----CCcEEEEEEecCCC-cccceeEehhhhcCeEEEEEC
Confidence            8432111112479999999976 4899999999999764     35789988865432 235899999999999999999


Q ss_pred             CCCEEEEecCC
Q 037706          369 EKERIGFQPMD  379 (394)
Q Consensus       369 ~~~riGfa~~~  379 (394)
                      +|+|||||++.
T Consensus       389 ~~~riGfa~~~  399 (413)
T 3vla_A          389 ATSRVGFSGTL  399 (413)
T ss_dssp             TTTEEEEEEEG
T ss_pred             CCCEEEEEEec
Confidence            99999999843
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 394
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-43
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 5e-21
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 6e-21
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 7e-20
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 8e-20
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 1e-19
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 1e-19
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 5e-19
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 1e-18
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 3e-18
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 1e-17
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-17
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-17
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 5e-16
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 9e-16
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-15
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 2e-15
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 4e-15
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 9e-14
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-13
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-12
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 3e-12
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  153 bits (387), Expect = 2e-43
 Identities = 62/399 (15%), Positives = 120/399 (30%), Gaps = 60/399 (15%)

Query: 3   QVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHS 62
            + +D    L W  C                              +   C+S  CL  ++
Sbjct: 25  SLVLDVAGPLVWSTC------------------------DGGQPPAEIPCSSPTCLLANA 60

Query: 63  SDNPFDPCTMSGCSLSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIR 122
              P       GC   +       +PC ++ Y    G    G L+      + +      
Sbjct: 61  YPAP-------GCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPV 113

Query: 123 EIPKFCFGCVGST-------YREPIGIAGFGRGALSVPSQLGFLQKGFSHCFLAFKYAND 175
                      +         R   G+AG     L++P+Q+    +  ++ FL       
Sbjct: 114 SKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVAS-AQKVANRFLLCLPTGG 172

Query: 176 PNISSPLVIGDVAISSKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFD 235
           P ++              ++ +TP++     P  +YI   +I +G++ +           
Sbjct: 173 PGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSP-AHYISARSIVVGDTRVP------VPEG 225

Query: 236 SQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTIT-----YYPRAKEVEERTGFDLCYRV 290
           +   GG+++ +   Y  L    Y  L+      +        P A+ VE    F +CY  
Sbjct: 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDT 285

Query: 291 PCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGP 350
               N       P++           +   N               C+ F  M     G 
Sbjct: 286 KTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMV-----DVKQGTACVAFVEMKGVAAGD 340

Query: 351 SG----VFGSFQQQNVEVVYDLEKERIGFQPMDCASTAS 385
                 + G  Q ++  + +D+EK+R+GF  +   +   
Sbjct: 341 GRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCG 379
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=100.00  E-value=9.2e-48  Score=367.66  Aligned_cols=286  Identities=23%  Similarity=0.310  Sum_probs=226.2

Q ss_pred             EEEEEEcCCcceeEcCCCCCCCCCCCCccc---CCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCc
Q 037706            2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYR---NNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLS   78 (394)
Q Consensus         2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~---~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~   78 (394)
                      |.|+|||||+++||++..+  .|..|..+.   ..+.++.|+|++|+|++...|.                         
T Consensus        27 ~~~i~DTGS~~~Wv~~~~~--~c~~~~~~~~~~~c~~~~~y~~~~SsT~~~~~~~-------------------------   79 (334)
T d1j71a_          27 QTVVIDTGSSDLWVVDTDA--ECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQD-------------------------   79 (334)
T ss_dssp             EEEEEETTCCCEEEEEEEE--EECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEE-------------------------
T ss_pred             EEEEEECCCcceEEeeCCC--CccccccccCCcccccCCcCCcccCCcccCCCcC-------------------------
Confidence            7899999999999987622  344443222   2345678999999999876542                         


Q ss_pred             ccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCCCcceEeecCCCCCC-------
Q 037706           79 TLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALS-------  151 (394)
Q Consensus        79 ~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~~~dGIlGLg~~~~S-------  151 (394)
                                   |.+.|++|..+.|.++.|+|+|++      ++++++.||++.... ..+||+|||+...+       
T Consensus        80 -------------~~~~Y~~g~~~~G~~~~D~~~~g~------~~~~~~~f~~~~~~~-~~~GilGlg~~~~~~~~~~~~  139 (334)
T d1j71a_          80 -------------FSIEYGDLTSSQGSFYKDTVGFGG------ISIKNQQFADVTTTS-VDQGIMGIGFTADEAGYNLYD  139 (334)
T ss_dssp             -------------EEEEBTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEES-SSSCEEECSCGGGSSTTCCCC
T ss_pred             -------------EEEEeCCCceEEEEEEeeEEEEee------eeccCceeeeeeeec-cccCccccccccccccccccc
Confidence                         999999988888999999999998      788999999988764 46999999976432       


Q ss_pred             -hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcCC-CCCceeecCccCCCCCCceEEEeeEEEECCEEee
Q 037706          152 -VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAISS-KDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLT  225 (394)
Q Consensus       152 -~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~-~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~  225 (394)
                       ++.+|..    .+++|++||.+.     ....|.|+||++|+.+ .+++.|+|+..    +.+|.|.|++|.|++. .+
T Consensus       140 ~~~~~l~~q~~i~~~~fs~~l~~~-----~~~~g~l~lGg~d~~~~~g~~~~~~~~~----~~~~~v~l~~i~v~g~-~~  209 (334)
T d1j71a_         140 NVPVTLKKQGIINKNAYSLYLNSE-----DASTGKIIFGGVDNAKYTGTLTALPVTS----SVELRVHLGSINFDGT-SV  209 (334)
T ss_dssp             CHHHHHHHTTSCSSSEEEEECCCT-----TCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEEEEEEEEETTE-EE
T ss_pred             hhhHHHHhccccccceEEEEeccC-----CCCCceEEecccChhhcccceeEeeecc----ccceEEeeceEEECCE-Ee
Confidence             4444443    367999999864     3467999999999884 88899999874    3479999999999999 76


Q ss_pred             eecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCCeE
Q 037706          226 EVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSI  305 (394)
Q Consensus       226 ~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i  305 (394)
                      ...           ..+||||||++++||+++|++|.+++.+....            ...+|..+|      ....|.+
T Consensus       210 ~~~-----------~~aiiDSGt~~~~lp~~~~~~l~~~~~~~~~~------------~~~~~~~~~------~~~~p~i  260 (334)
T d1j71a_         210 STN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWDS------------RNEIYRLPS------CDLSGDA  260 (334)
T ss_dssp             EEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEET------------TTTEEECSS------SCCCSEE
T ss_pred             ccc-----------ccccccCCCcceeccHHHHHHHHHHhCCEEcC------------CCCeeeccc------cccCCCc
Confidence            532           45999999999999999999999888543321            123454443      1346999


Q ss_pred             EEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCCCcchh
Q 037706          306 TFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCASTA  384 (394)
Q Consensus       306 ~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~c~~~~  384 (394)
                      +|+|.+|++|+|++++|+++..     .+..|+ +++..      +.||||++|||++|+|||+||+|||||+.+|++..
T Consensus       261 ~f~f~~g~~~~i~~~~y~~~~~-----~~~~C~~~i~~~------~~~ILG~~fl~~~y~vfD~~n~~iGfA~~~~~~~~  329 (334)
T d1j71a_         261 VFNFDQGVKITVPLSELILKDS-----DSSICYFGISRN------DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSS  329 (334)
T ss_dssp             EEEESTTCEEEEEGGGGEEECS-----SSSCEEESEEEC------TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCC
T ss_pred             eEEeCCCEEEEEChHHeEEecC-----CCCEEEEEecCC------CCcEECHHhhCcEEEEEECCCCEEEEEECCCCCcC
Confidence            9999878999999999998653     345787 66653      25899999999999999999999999999998753
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure