Citrus Sinensis ID: 037727

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-----
METWRDKITHRDQQEEKNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSSKQLGYVLEIECSY
cccccccccccccHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccc
ccccccccccHHcccccccccccccccccEccccEcccEEEEccccccccccccccHHHHHHHHHHcccccEEEEEEEEccHHHccEccccEcccHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHcccEEcccccccccccccEEEEEccccEEccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEcc
metwrdkithrdqqeeknnnniiplltpykmgsfnlshrivlaplsrmrsydyipqphaILYYSQRTTEGGFLISEASVVsetgrgykhtpgiwtkeQVEAWKPIVAEVQAKGGIFFCQLLHagrisnrdfqpngkapisysdkplknqpnggfnaaeftpprrlrtgeipqIVNDFRIAARNAIEAEIKSSKQLGYVLEIECSY
metwrdkithrdqqeeknnnniipLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGgfnaaeftpprrlrtgeiPQIVNDFRIAARNAIEAEiksskqlgyvLEIECSY
METWRDKITHRDQQEEKNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFriaarnaieaeiKSSKQLGYVLEIECSY
********************NIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRIS***************************************TGEIPQIVNDFRIAARNAIEAEIKSSKQLGYVLEIE***
**************************TPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSSKQLGYVLEIECS*
*************QEEKNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSSKQLGYVLEIECSY
***********************PLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSSKQLGYVLEIECSY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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METWRDKITHRDQQEEKNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSSKQLGYVLEIECSY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query205 2.2.26 [Sep-21-2011]
Q8LAH7 372 12-oxophytodienoate reduc no no 0.804 0.443 0.722 6e-66
Q9XG54 376 12-oxophytodienoate reduc N/A no 0.839 0.457 0.682 2e-65
B9FSC8 367 Putative 12-oxophytodieno yes no 0.8 0.446 0.690 1e-63
Q8GYB8 374 12-oxophytodienoate reduc no no 0.804 0.441 0.692 1e-63
P0DI09269 Putative 12-oxophytodieno no no 0.775 0.591 0.670 6e-59
P0DI08269 Putative 12-oxophytodieno no no 0.775 0.591 0.670 6e-59
Q69TH6 382 Putative 12-oxophytodieno yes no 0.785 0.421 0.636 6e-58
Q8GYA3 324 Putative 12-oxophytodieno no no 0.741 0.469 0.656 8e-58
Q69TH4 376 Putative 12-oxophytodieno yes no 0.839 0.457 0.590 1e-56
Q69TH8 380 Putative 12-oxophytodieno no no 0.839 0.452 0.584 1e-56
>sp|Q8LAH7|OPR1_ARATH 12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2 Back     alignment and function desciption
 Score =  249 bits (637), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 120/166 (72%), Positives = 136/166 (81%), Gaps = 1/166 (0%)

Query: 23  IPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSE 82
           +PLLTPYKMG FNLSHR+VLAPL+R RSY  +PQPHA +YYSQRTT GGFLI+EA+ VS+
Sbjct: 10  VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSD 69

Query: 83  TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
           T +GY+ TPGIWTKE VEAWKPIV  V AKGGIFFCQ+ H GR+SN  FQPNGKAPIS S
Sbjct: 70  TAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCS 129

Query: 143 DKPLKNQ-PNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEA 187
           DKPL  Q  + G + A FTPPRRL   EIP IVNDFR+AARNA+EA
Sbjct: 130 DKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEA 175
Specifically cleaves olefinic bonds in alpha,beta-unsaturated carbonyls and may be involved in detoxification or modification of these reactive compounds. May be involved in the biosynthesis or metabolism of oxylipin signaling molecules. In vitro, reduces 9R,13R-12-oxophyodienoic acid (9R,13R-OPDA) to 9R,13R-OPC-8:0, but only poorly 9S,13S-OPDA, the natural precursor of jasmonic acid. Can detoxify the explosive 2,4,6-trinitrotoluene (TNT) in vitro and in vivo by catalyzing its nitroreduction to form hydroxylamino-dinitrotoluene (HADNT).
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9XG54|OPR1_SOLLC 12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1 PE=1 SV=1 Back     alignment and function description
>sp|B9FSC8|OPR11_ORYSJ Putative 12-oxophytodienoate reductase 11 OS=Oryza sativa subsp. japonica GN=OPR11 PE=2 SV=1 Back     alignment and function description
>sp|Q8GYB8|OPR2_ARATH 12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2 Back     alignment and function description
>sp|P0DI09|ORL2B_ARATH Putative 12-oxophytodienoate reductase-like protein 2B OS=Arabidopsis thaliana GN=At1g18020 PE=3 SV=1 Back     alignment and function description
>sp|P0DI08|ORL2A_ARATH Putative 12-oxophytodienoate reductase-like protein 2A OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1 Back     alignment and function description
>sp|Q69TH6|OPR3_ORYSJ Putative 12-oxophytodienoate reductase 3 OS=Oryza sativa subsp. japonica GN=OPR3 PE=3 SV=1 Back     alignment and function description
>sp|Q8GYA3|OPRL1_ARATH Putative 12-oxophytodienoate reductase-like protein 1 OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2 Back     alignment and function description
>sp|Q69TH4|OPR2_ORYSJ Putative 12-oxophytodienoate reductase 2 OS=Oryza sativa subsp. japonica GN=OPR2 PE=3 SV=1 Back     alignment and function description
>sp|Q69TH8|OPR4_ORYSJ Putative 12-oxophytodienoate reductase 4 OS=Oryza sativa subsp. japonica GN=OPR4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query205
224135727 370 predicted protein [Populus trichocarpa] 0.804 0.445 0.759 5e-69
224136075 358 predicted protein [Populus trichocarpa] 0.785 0.449 0.739 3e-67
118487577 365 unknown [Populus trichocarpa] 0.785 0.441 0.733 3e-67
296089414 543 unnamed protein product [Vitis vinifera] 0.868 0.327 0.661 9e-67
224135719 365 predicted protein [Populus trichocarpa] 0.785 0.441 0.727 2e-66
225460240 379 PREDICTED: 12-oxophytodienoate reductase 0.868 0.469 0.661 4e-66
356570696 365 PREDICTED: 12-oxophytodienoate reductase 0.848 0.476 0.679 5e-66
449441806 368 PREDICTED: LOW QUALITY PROTEIN: 12-oxoph 0.848 0.472 0.697 2e-65
449524545 376 PREDICTED: 12-oxophytodienoate reductase 0.848 0.462 0.697 2e-65
357480967 369 12-oxophytodienoate reductase [Medicago 0.858 0.476 0.673 2e-65
>gi|224135727|ref|XP_002327289.1| predicted protein [Populus trichocarpa] gi|222835659|gb|EEE74094.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  266 bits (679), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 126/166 (75%), Positives = 142/166 (85%), Gaps = 1/166 (0%)

Query: 23  IPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSE 82
           +PLLTPYKMG FNLSHRIVLAPL+R RSY+ +PQPHAILYYSQRTTEGG LI+EA+ VS+
Sbjct: 8   LPLLTPYKMGKFNLSHRIVLAPLTRQRSYNNVPQPHAILYYSQRTTEGGLLIAEATGVSD 67

Query: 83  TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
           T +GY +TPGIWTKEQVEAWKPIV  V AKGGIFFCQL H GR+SNRDFQPNG+APIS +
Sbjct: 68  TAQGYPNTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQLWHVGRVSNRDFQPNGQAPISCT 127

Query: 143 DKPLKNQPNG-GFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEA 187
           DKPL  Q    G +A +FT PRRLRT EIP +VNDFRIAARNA+EA
Sbjct: 128 DKPLAPQIRANGIDAVDFTTPRRLRTDEIPHVVNDFRIAARNAMEA 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224136075|ref|XP_002327374.1| predicted protein [Populus trichocarpa] gi|222835744|gb|EEE74179.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118487577|gb|ABK95614.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296089414|emb|CBI39233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224135719|ref|XP_002327287.1| predicted protein [Populus trichocarpa] gi|222835657|gb|EEE74092.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225460240|ref|XP_002281119.1| PREDICTED: 12-oxophytodienoate reductase 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356570696|ref|XP_003553521.1| PREDICTED: 12-oxophytodienoate reductase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449441806|ref|XP_004138673.1| PREDICTED: LOW QUALITY PROTEIN: 12-oxophytodienoate reductase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449524545|ref|XP_004169282.1| PREDICTED: 12-oxophytodienoate reductase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357480967|ref|XP_003610769.1| 12-oxophytodienoate reductase [Medicago truncatula] gi|355512104|gb|AES93727.1| 12-oxophytodienoate reductase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query205
TAIR|locus:2030086 397 OPR1 "12-oxophytodienoate redu 0.756 0.390 0.717 2.2e-57
TAIR|locus:2030096 374 OPR2 "12-oxophytodienoate redu 0.756 0.414 0.685 6.1e-55
TAIR|locus:2030948269 AT1G17990 [Arabidopsis thalian 0.726 0.553 0.649 3.6e-50
TAIR|locus:1005716725269 AT1G18020 [Arabidopsis thalian 0.726 0.553 0.649 3.6e-50
TAIR|locus:2012285 324 AT1G09400 [Arabidopsis thalian 0.692 0.438 0.646 6.7e-49
UNIPROTKB|Q84QK0 380 OPR1 "12-oxophytodienoate redu 0.736 0.397 0.6 1.2e-47
UNIPROTKB|Q6Z965 394 OPR7 "12-oxophytodienoate redu 0.780 0.406 0.497 1.2e-40
TAIR|locus:2051516 391 OPR3 "oxophytodienoate-reducta 0.760 0.398 0.481 6.3e-37
UNIPROTKB|C5H429 387 DBR2 "Artemisinic aldehyde Del 0.736 0.390 0.449 1.7e-34
UNIPROTKB|Q4KCX1 366 nemA "N-ethylmaleimide reducta 0.731 0.409 0.442 6.4e-28
TAIR|locus:2030086 OPR1 "12-oxophytodienoate reductase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 112/156 (71%), Positives = 126/156 (80%)

Query:    23 IPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSE 82
             +PLLTPYKMG FNLSHR+VLAPL+R RSY  +PQPHA +YYSQRTT GGFLI+EA+ VS+
Sbjct:    10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSD 69

Query:    83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
             T +GY+ TPGIWTKE VEAWKPIV  V AKGGIFFCQ+ H GR+SN  FQPNGKAPIS S
Sbjct:    70 TAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCS 129

Query:   143 DKPLKNQ-PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
             DKPL  Q  + G + A FTPPRRL   EIP IVNDF
Sbjct:   130 DKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDF 165
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0010150 "leaf senescence" evidence=TAS
GO:0010181 "FMN binding" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009611 "response to wounding" evidence=IEP
GO:0009695 "jasmonic acid biosynthetic process" evidence=TAS
GO:0006629 "lipid metabolic process" evidence=TAS
GO:0009751 "response to salicylic acid stimulus" evidence=IEP
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0016629 "12-oxophytodienoate reductase activity" evidence=ISS;IDA
GO:0005829 "cytosol" evidence=IDA
GO:0031407 "oxylipin metabolic process" evidence=IDA
TAIR|locus:2030096 OPR2 "12-oxophytodienoate reductase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030948 AT1G17990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716725 AT1G18020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012285 AT1G09400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84QK0 OPR1 "12-oxophytodienoate reductase 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6Z965 OPR7 "12-oxophytodienoate reductase 7" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2051516 OPR3 "oxophytodienoate-reductase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|C5H429 DBR2 "Artemisinic aldehyde Delta(11(13)) reductase" [Artemisia annua (taxid:35608)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KCX1 nemA "N-ethylmaleimide reductase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_scaffold_41000063
hypothetical protein (370 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VIII.1137.1
allene-oxide cyclase family protein (EC-5.3.99.6) (173 aa)
     •• 0.901
ACLL20
acyl-coa ligase (554 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query205
cd02933 338 cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-lik 9e-74
PLN02411 391 PLN02411, PLN02411, 12-oxophytodienoate reductase 4e-67
PRK10605 362 PRK10605, PRK10605, N-ethylmaleimide reductase; Pr 9e-45
COG1902 363 COG1902, NemA, NADH:flavin oxidoreductases, Old Ye 4e-37
cd02803 327 cd02803, OYE_like_FMN_family, Old yellow enzyme (O 5e-36
pfam00724 336 pfam00724, Oxidored_FMN, NADH:flavin oxidoreductas 6e-34
cd02932 336 cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) Yqj 9e-24
cd04735 353 cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-r 7e-20
cd04747 361 cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-r 4e-19
PRK13523 337 PRK13523, PRK13523, NADPH dehydrogenase NamA; Prov 7e-15
PRK08255 765 PRK08255, PRK08255, salicylyl-CoA 5-hydroxylase; R 2e-13
cd04734 343 cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-r 1e-12
cd02930 353 cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) 3e-12
TIGR03996 633 TIGR03996, mycofact_OYE_1, mycofactocin system Fad 3e-06
cd04733 338 cd04733, OYE_like_2_FMN, Old yellow enzyme (OYE)-r 1e-05
TIGR03997 645 TIGR03997, mycofact_OYE_2, mycofactocin system Fad 4e-04
>gnl|CDD|239243 cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information 
 Score =  225 bits (577), Expect = 9e-74
 Identities = 74/165 (44%), Positives = 99/165 (60%), Gaps = 2/165 (1%)

Query: 24  PLLTPYKMGSFNLSHRIVLAPLSRMRS-YDYIPQPHAILYYSQRTTEGGFLISEASVVSE 82
            L +P K+G+  L +RIV+APL+R R+  D +P      YY+QR +  G +I+EA+ +S 
Sbjct: 1   KLFSPLKLGNLTLKNRIVMAPLTRSRADPDGVPTDLMAEYYAQRAS-AGLIITEATQISP 59

Query: 83  TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
            G+GY +TPGI+T EQVE WK +   V AKGG  F QL H GR+S+    P G  P++ S
Sbjct: 60  QGQGYPNTPGIYTDEQVEGWKKVTDAVHAKGGKIFLQLWHVGRVSHPSLLPGGAPPVAPS 119

Query: 143 DKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEA 187
               + +         +  PR L T EIP IV DFR AARNAIEA
Sbjct: 120 AIAAEGKVFTPAGKVPYPTPRALTTEEIPGIVADFRQAARNAIEA 164

OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes. Length = 338
>gnl|CDD|178033 PLN02411, PLN02411, 12-oxophytodienoate reductase Back     alignment and domain information
>gnl|CDD|182584 PRK10605, PRK10605, N-ethylmaleimide reductase; Provisional Back     alignment and domain information
>gnl|CDD|224814 COG1902, NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|239201 cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>gnl|CDD|216083 pfam00724, Oxidored_FMN, NADH:flavin oxidoreductase / NADH oxidase family Back     alignment and domain information
>gnl|CDD|239242 cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>gnl|CDD|240086 cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>gnl|CDD|240095 cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5 Back     alignment and domain information
>gnl|CDD|184110 PRK13523, PRK13523, NADPH dehydrogenase NamA; Provisional Back     alignment and domain information
>gnl|CDD|236203 PRK08255, PRK08255, salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>gnl|CDD|240085 cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>gnl|CDD|239240 cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>gnl|CDD|188511 TIGR03996, mycofact_OYE_1, mycofactocin system FadH/OYE family oxidoreductase 1 Back     alignment and domain information
>gnl|CDD|240084 cd04733, OYE_like_2_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>gnl|CDD|234436 TIGR03997, mycofact_OYE_2, mycofactocin system FadH/OYE family oxidoreductase 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 205
COG1902 363 NemA NADH:flavin oxidoreductases, Old Yellow Enzym 100.0
PLN02411 391 12-oxophytodienoate reductase 100.0
PF00724 341 Oxidored_FMN: NADH:flavin oxidoreductase / NADH ox 100.0
cd04734 343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 100.0
PRK13523 337 NADPH dehydrogenase NamA; Provisional 100.0
PRK10605 362 N-ethylmaleimide reductase; Provisional 100.0
cd04733 338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 100.0
cd02933 338 OYE_like_FMN Old yellow enzyme (OYE)-like FMN bind 100.0
cd04735 353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 100.0
cd04747 361 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN 100.0
cd02932 336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 100.0
cd02930 353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 100.0
cd02929 370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 100.0
cd02803 327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 100.0
cd02931 382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 100.0
PRK08255 765 salicylyl-CoA 5-hydroxylase; Reviewed 100.0
KOG0134 400 consensus NADH:flavin oxidoreductase/12-oxophytodi 99.91
PRK07259 301 dihydroorotate dehydrogenase 1B; Reviewed 97.83
cd04740 296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 97.78
TIGR01037 300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 97.46
TIGR00737 319 nifR3_yhdG putative TIM-barrel protein, nifR3 fami 96.97
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 96.2
cd02810 289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 96.06
PRK10415 321 tRNA-dihydrouridine synthase B; Provisional 95.52
cd04739 325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 95.25
KOG0134 400 consensus NADH:flavin oxidoreductase/12-oxophytodi 94.8
COG0042 323 tRNA-dihydrouridine synthase [Translation, ribosom 94.37
PRK07565 334 dihydroorotate dehydrogenase 2; Reviewed 94.36
cd02940 299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 93.97
PRK05286 344 dihydroorotate dehydrogenase 2; Reviewed 89.69
cd02801 231 DUS_like_FMN Dihydrouridine synthase-like (DUS-lik 88.92
PRK02506 310 dihydroorotate dehydrogenase 1A; Reviewed 87.03
cd04741 294 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) c 86.91
PRK08318 420 dihydropyrimidine dehydrogenase subunit B; Validat 84.28
PRK03170 292 dihydrodipicolinate synthase; Provisional 81.47
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=5.6e-56  Score=390.09  Aligned_cols=177  Identities=34%  Similarity=0.569  Sum_probs=160.3

Q ss_pred             CCCcCCCCcceeCCeecCCceEeCCCCCCcc-CCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHH
Q 037727           20 NNIIPLLTPYKMGSFNLSHRIVLAPLSRMRS-YDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKE   97 (205)
Q Consensus        20 ~~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~-~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~   97 (205)
                      +.+++||+|++||+++|||||||+||+++++ .+|.||+.+++||++||+|| ||||+|.+.|++.|+.+++++++|+|+
T Consensus         1 ~~~~~LF~P~~lg~~~L~NRivmaPm~~~~a~~dG~pt~~~~~yy~~RA~gG~Glii~~~~~v~~~g~~~~~~~~l~~d~   80 (363)
T COG1902           1 MSMPKLFEPLKLGGLTLKNRIVMAPMTRNRATPDGLPTDLLAEYYAERAKGGAGLIITEATAVDPGGRGYPGQPGLWSDA   80 (363)
T ss_pred             CCccccCCCeeECCEEeccceeecCcccccccCCCCCCHHHHHHHHHHhcCCCCEEEEeeEeeCcccccCCCCCccCChh
Confidence            3567899999999999999999999999987 48889999999999999999 999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 037727           98 QVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF  177 (205)
Q Consensus        98 ~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f  177 (205)
                      ++++||+++++||++|+++++||+|+||++..... ....+++||..+...        .....||+||++||+++|++|
T Consensus        81 ~i~~~~~vt~avH~~G~~i~iQL~H~Gr~~~~~~~-~~~~~vapS~~~~~~--------~~~~~pr~mt~~eI~~ii~~f  151 (363)
T COG1902          81 QIPGLKRLTEAVHAHGAKIFIQLWHAGRKARASHP-WLPSAVAPSAIPAPG--------GRRATPRELTEEEIEEVIEDF  151 (363)
T ss_pred             HhHHHHHHHHHHHhcCCeEEEEeccCccccccccc-CCCcccCCCcccccc--------CCCCCCccCCHHHHHHHHHHH
Confidence            99999999999999999999999999998765431 114578888776542        123679999999999999999


Q ss_pred             HHHHHHHHHccccee---eccchhhhhhcCC
Q 037727          178 RIAARNAIEAEIKSS---KQLGYVLEIECSY  205 (205)
Q Consensus       178 ~~AA~ra~~AGfDgV---~ahGyLl~qFlSp  205 (205)
                      ++||+||++||||||   +||||||+|||||
T Consensus       152 ~~AA~rA~~AGFDgVEIH~AhGYLi~qFlsp  182 (363)
T COG1902         152 ARAARRAKEAGFDGVEIHGAHGYLLSQFLSP  182 (363)
T ss_pred             HHHHHHHHHcCCCEEEEeeccchHHHHhcCC
Confidence            999999999999999   9999999999998

>PLN02411 12-oxophytodienoate reductase Back     alignment and domain information
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside [] Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>PRK13523 NADPH dehydrogenase NamA; Provisional Back     alignment and domain information
>PRK10605 N-ethylmaleimide reductase; Provisional Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5 Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>KOG0134 consensus NADH:flavin oxidoreductase/12-oxophytodienoate reductase [Energy production and conversion; General function prediction only] Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>TIGR00737 nifR3_yhdG putative TIM-barrel protein, nifR3 family Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK10415 tRNA-dihydrouridine synthase B; Provisional Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>KOG0134 consensus NADH:flavin oxidoreductase/12-oxophytodienoate reductase [Energy production and conversion; General function prediction only] Back     alignment and domain information
>COG0042 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain Back     alignment and domain information
>PRK02506 dihydroorotate dehydrogenase 1A; Reviewed Back     alignment and domain information
>cd04741 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK03170 dihydrodipicolinate synthase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query205
1vji_A 372 Gene Product Of At1g76680 From Arabidopsis Thaliana 5e-62
1icp_A 376 Crystal Structure Of 12-Oxophytodienoate Reductase 5e-61
3hgo_A 402 Crystal Structure Of The F74yH244Y OPR3 DOUBLE MUTA 6e-42
2hs6_A 402 Crystal Structure Of The E291k Mutant Of 12- Oxophy 1e-41
2hs8_A 402 Crystal Structure Of The Y364f Mutant Of 12- Oxophy 1e-41
1q45_A 391 12-0xo-Phytodienoate Reductase Isoform 3 Length = 3 4e-40
3gx9_A 377 Structure Of Morphinone Reductase N189a Mutant In C 2e-28
2r14_A 377 Structure Of Morphinone Reductase In Complex With T 3e-28
1vyp_X 364 Stucture Of Pentaerythritol Tetranitrate Reductase 1e-27
3p67_A 373 T26s Mutant Of Pentaerythritol Tetranitrate Reducta 1e-27
1gwj_A 377 Morphinone Reductase Length = 377 2e-27
1vys_X 364 Stucture Of Pentaerythritol Tetranitrate Reductase 2e-27
3p84_A 365 Y351a Mutant Of Pentaerythritol Tetranitrate Reduct 3e-27
3p8j_A 365 Y351s Mutant Of Pentaerythritol Tetranitrate Reduct 3e-27
3p74_A 373 H181n Mutant Of Pentaerythritol Tetranitrate Reduct 3e-27
3p82_A 365 H184n Mutant Of Pentaerythritol Tetranitrate Reduct 3e-27
3p7y_A 365 Pentaerythritol Tetranitrate Reductase Co-Crystal S 3e-27
3p62_A 373 Wild-Type Pentaerythritol Tetranitrate Reductase Co 3e-27
3p8i_A 365 Y351f Mutant Of Pentaerythritol Tetranitrate Reduct 3e-27
2abb_A 364 Structure Of Petn Reductase Y186f In Complex With C 3e-27
1h50_A 364 Stucture Of Pentaerythritol Tetranitrate Reductase 3e-27
4ab4_A 362 Structure Of Xenobiotic Reductase B From Pseudomona 4e-23
3gka_A 361 Crystal Structure Of N-Ethylmaleimidine Reductase F 6e-23
4a3u_A 358 X-Structure Of The Old Yellow Enzyme Homologue From 4e-22
2gou_A 365 Structure Of Wild Type, Oxidized Sye1, An Oye Homol 3e-20
3aty_A 379 Crystal Structure Of Tcoye Length = 379 3e-19
3kru_A 343 Crystal Structure Of The Thermostable Old Yellow En 2e-14
3krz_A 337 Crystal Structure Of The Thermostable Nadh4-Bound O 2e-14
4df2_A 407 P. Stipitis Oye2.6 Complexed With P-Chlorophenol Le 3e-14
3tjl_A 407 Crystal Structure Of A Novel Oye From The Xylose-Fe 3e-14
4gwe_A 400 W116l-Oye1 Complexed With (R)-Carvone Length = 400 2e-12
4ge8_A 400 Oye1-W116i Complexed With (S)-Carvone Length = 400 4e-12
3rnd_A 399 W116i-Oye1 Complexed With 2-(Hydroxymethyl)-Cyclope 4e-12
1oya_A 400 Old Yellow Enzyme At 2 Angstroms Resolution: Overal 8e-12
1bwl_A 399 Old Yellow Enzyme (Oye1) Double Mutant H191n:n194h 9e-12
1bwk_A 399 Old Yellow Enzyme (Oye1) Mutant H191n Length = 399 9e-12
4gbu_A 400 Oye1-W116a In Complex With Aromatic Product Of S-Ca 9e-12
3txz_A 400 Oye1-W116q Complexed With R-Carvone Length = 400 1e-11
1k02_A 399 Crystal Structure Of Old Yellow Enzyme Mutant Gln11 3e-11
3l67_A 363 Xenobiotic Reductase A - C25s Variant Length = 363 6e-09
3l65_A 363 Xenobiotic Reductase A - C25a Mutant Length = 363 1e-08
1z41_A 338 Crystal Structure Of Oxidized Yqjm From Bacillus Su 1e-08
2h8x_A 358 Xenobiotic Reductase A-Oxidized Length = 358 2e-08
3n16_A 363 Xena - Y183f Length = 363 2e-08
3l5l_A 363 Xenobiotic Reductase A - Oxidized Length = 363 2e-08
3n14_A 363 Xena - W358a Length = 363 2e-08
2h8z_A 359 Xenobiotic Reductase A In Complex With 8-Hydroxycou 2e-08
3gr7_A 340 Structure Of Oye From Geobacillus Kaustophilus, Hex 2e-08
3hf3_A 349 Old Yellow Enzyme From Thermus Scotoductus Sa-01 Le 5e-07
>pdb|1VJI|A Chain A, Gene Product Of At1g76680 From Arabidopsis Thaliana Length = 372 Back     alignment and structure 
Iteration: 1

 Score =  233 bits (594), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 112/156 (71%), Positives = 126/156 (80%), Gaps = 1/156 (0%)
Query: 23  IPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSE 82
           +PLLTPYKMG FNLSHR+VLAPL+R RSY  +PQPHA +YYSQRTT GGFLI+EA+ VS+
Sbjct: 10  VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSD 69
Query: 83  TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
           T +GY+ TPGIWTKE VEAWKPIV  V AKGGIFFCQ+ H GR+SN  FQPNGKAPIS S
Sbjct: 70  TAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCS 129
Query: 143 DKPLKNQ-PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
           DKPL  Q  + G + A FTPPRRL   EIP IVNDF
Sbjct: 130 DKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDF 165
>pdb|1ICP|A Chain A, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From Tomato Complexed With Peg400 Length = 376 Back     alignment and structure
>pdb|3HGO|A Chain A, Crystal Structure Of The F74yH244Y OPR3 DOUBLE MUTANT FROM Tomato Length = 402 Back     alignment and structure
>pdb|2HS6|A Chain A, Crystal Structure Of The E291k Mutant Of 12- Oxophytodienoate Reductase 3 (Opr3) From Tomato Length = 402 Back     alignment and structure
>pdb|2HS8|A Chain A, Crystal Structure Of The Y364f Mutant Of 12- Oxophytodienoate Reductase 3 From Tomato Length = 402 Back     alignment and structure
>pdb|1Q45|A Chain A, 12-0xo-Phytodienoate Reductase Isoform 3 Length = 391 Back     alignment and structure
>pdb|3GX9|A Chain A, Structure Of Morphinone Reductase N189a Mutant In Complex With Tetrahydronad Length = 377 Back     alignment and structure
>pdb|2R14|A Chain A, Structure Of Morphinone Reductase In Complex With Tetrahydronad Length = 377 Back     alignment and structure
>pdb|1VYP|X Chain X, Stucture Of Pentaerythritol Tetranitrate Reductase W102f Mutant And Complexed With Picric Acid Length = 364 Back     alignment and structure
>pdb|3P67|A Chain A, T26s Mutant Of Pentaerythritol Tetranitrate Reductase Containing A Bound Acetate Molecule Length = 373 Back     alignment and structure
>pdb|1GWJ|A Chain A, Morphinone Reductase Length = 377 Back     alignment and structure
>pdb|1VYS|X Chain X, Stucture Of Pentaerythritol Tetranitrate Reductase W102y Mutant And Complexed With Picric Acid Length = 364 Back     alignment and structure
>pdb|3P84|A Chain A, Y351a Mutant Of Pentaerythritol Tetranitrate Reductase Containing A Bound Acetate Molecule Length = 365 Back     alignment and structure
>pdb|3P8J|A Chain A, Y351s Mutant Of Pentaerythritol Tetranitrate Reductase Containing A Bound Acetate Molecule Length = 365 Back     alignment and structure
>pdb|3P74|A Chain A, H181n Mutant Of Pentaerythritol Tetranitrate Reductase Containing A C- Terminal His8-Tag Length = 373 Back     alignment and structure
>pdb|3P82|A Chain A, H184n Mutant Of Pentaerythritol Tetranitrate Reductase Containing Bound Acetate Ion Length = 365 Back     alignment and structure
>pdb|3P7Y|A Chain A, Pentaerythritol Tetranitrate Reductase Co-Crystal Structure With Bound (E)-1-(2'-Hydroxyphenyl)-2-Nitroethene Length = 365 Back     alignment and structure
>pdb|3P62|A Chain A, Wild-Type Pentaerythritol Tetranitrate Reductase Containing A C- Terminal 8-Histidine Tag Length = 373 Back     alignment and structure
>pdb|3P8I|A Chain A, Y351f Mutant Of Pentaerythritol Tetranitrate Reductase Containing A Bound Acetate Molecule Length = 365 Back     alignment and structure
>pdb|2ABB|A Chain A, Structure Of Petn Reductase Y186f In Complex With Cyanide Length = 364 Back     alignment and structure
>pdb|1H50|A Chain A, Stucture Of Pentaerythritol Tetranitrate Reductase And Complexes Length = 364 Back     alignment and structure
>pdb|4AB4|A Chain A, Structure Of Xenobiotic Reductase B From Pseudomonas Putida In Complex With Tnt Length = 362 Back     alignment and structure
>pdb|3GKA|A Chain A, Crystal Structure Of N-Ethylmaleimidine Reductase From Burkholderia Pseudomallei Length = 361 Back     alignment and structure
>pdb|4A3U|A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) Length = 358 Back     alignment and structure
>pdb|2GOU|A Chain A, Structure Of Wild Type, Oxidized Sye1, An Oye Homologue From S. Oneidensis Length = 365 Back     alignment and structure
>pdb|3ATY|A Chain A, Crystal Structure Of Tcoye Length = 379 Back     alignment and structure
>pdb|3KRU|A Chain A, Crystal Structure Of The Thermostable Old Yellow Enzyme From Thermoanaerobacter Pseudethanolicus E39 Length = 343 Back     alignment and structure
>pdb|3KRZ|A Chain A, Crystal Structure Of The Thermostable Nadh4-Bound Old Yellow Enzyme From Thermoanaerobacter Pseudethanolicus E39 Length = 337 Back     alignment and structure
>pdb|4DF2|A Chain A, P. Stipitis Oye2.6 Complexed With P-Chlorophenol Length = 407 Back     alignment and structure
>pdb|3TJL|A Chain A, Crystal Structure Of A Novel Oye From The Xylose-Fermenting Fungus P. Stipitis Length = 407 Back     alignment and structure
>pdb|4GWE|A Chain A, W116l-Oye1 Complexed With (R)-Carvone Length = 400 Back     alignment and structure
>pdb|4GE8|A Chain A, Oye1-W116i Complexed With (S)-Carvone Length = 400 Back     alignment and structure
>pdb|3RND|A Chain A, W116i-Oye1 Complexed With 2-(Hydroxymethyl)-Cyclopent-2-Enone Length = 399 Back     alignment and structure
>pdb|1OYA|A Chain A, Old Yellow Enzyme At 2 Angstroms Resolution: Overall Structure, Ligand Binding And Comparison With Related Flavoproteins Length = 400 Back     alignment and structure
>pdb|1BWL|A Chain A, Old Yellow Enzyme (Oye1) Double Mutant H191n:n194h Length = 399 Back     alignment and structure
>pdb|1BWK|A Chain A, Old Yellow Enzyme (Oye1) Mutant H191n Length = 399 Back     alignment and structure
>pdb|4GBU|A Chain A, Oye1-W116a In Complex With Aromatic Product Of S-Carvone Dismutation Length = 400 Back     alignment and structure
>pdb|3TXZ|A Chain A, Oye1-W116q Complexed With R-Carvone Length = 400 Back     alignment and structure
>pdb|1K02|A Chain A, Crystal Structure Of Old Yellow Enzyme Mutant Gln114asn Length = 399 Back     alignment and structure
>pdb|3L67|A Chain A, Xenobiotic Reductase A - C25s Variant Length = 363 Back     alignment and structure
>pdb|3L65|A Chain A, Xenobiotic Reductase A - C25a Mutant Length = 363 Back     alignment and structure
>pdb|1Z41|A Chain A, Crystal Structure Of Oxidized Yqjm From Bacillus Subtilis Length = 338 Back     alignment and structure
>pdb|2H8X|A Chain A, Xenobiotic Reductase A-Oxidized Length = 358 Back     alignment and structure
>pdb|3N16|A Chain A, Xena - Y183f Length = 363 Back     alignment and structure
>pdb|3L5L|A Chain A, Xenobiotic Reductase A - Oxidized Length = 363 Back     alignment and structure
>pdb|3N14|A Chain A, Xena - W358a Length = 363 Back     alignment and structure
>pdb|2H8Z|A Chain A, Xenobiotic Reductase A In Complex With 8-Hydroxycoumarin Length = 359 Back     alignment and structure
>pdb|3GR7|A Chain A, Structure Of Oye From Geobacillus Kaustophilus, Hexagonal Crystal Form Length = 340 Back     alignment and structure
>pdb|3HF3|A Chain A, Old Yellow Enzyme From Thermus Scotoductus Sa-01 Length = 349 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query205
1icp_A 376 OPR1, 12-oxophytodienoate reductase 1; beta-alpha- 2e-91
2hsa_B 402 12-oxophytodienoate reductase 3; alpha beta 8 barr 1e-87
2r14_A 377 Morphinone reductase; H-tunnelling, flavoprotein, 2e-85
1vyr_A 364 Pentaerythritol tetranitrate reductase; oxidoreduc 1e-83
2gou_A 365 Oxidoreductase, FMN-binding; OLD yeallow enzyme, f 4e-79
3rnd_A 399 NADPH dehydrogenase 1; TIM barrel, oxidoreductase; 8e-79
3gka_A 361 N-ethylmaleimide reductase; decode biostructures, 2e-78
3tjl_A 407 NADPH dehydrogenase; OLD yellow enzyme, flavin mon 7e-77
3aty_A 379 Tcoye, prostaglandin F2A synthase; alpha/beta barr 2e-71
3l5a_A 419 NADH/flavin oxidoreductase/NADH oxidase; OLD yello 6e-47
1z41_A 338 YQJM, probable NADH-dependent flavin oxidoreductas 3e-26
3gr7_A 340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 8e-26
3hgj_A 349 Chromate reductase; TIM barrel, oxidoreductase; HE 1e-24
3kru_A 343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 2e-24
3l5l_A 363 Xenobiotic reductase A; TIM barrel, oxidoreductase 7e-24
1ps9_A 671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 2e-23
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 1e-21
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 2e-21
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A* Length = 376 Back     alignment and structure
 Score =  271 bits (695), Expect = 2e-91
 Identities = 118/177 (66%), Positives = 140/177 (79%), Gaps = 1/177 (0%)

Query: 12  DQQEEKNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGG 71
           ++  E+   + IPL++P KMG F L HR+VLAPL+R RSY YIPQPHAIL+YSQR+T GG
Sbjct: 3   NKVVEEKQVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGG 62

Query: 72  FLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDF 131
            LI EA+V+SETG GYK  PGIWTKEQVEAWKPIV  V AKGGIFFCQ+ H GR+SN+DF
Sbjct: 63  LLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDF 122

Query: 132 QPNGKAPISYSDKPLKNQ-PNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEA 187
           QPNG+ PIS +D+ L  Q  + G + A FT PRRL T EIPQIVN+FR+AARNAIEA
Sbjct: 123 QPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEA 179
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* Length = 402 Back     alignment and structure
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* Length = 377 Back     alignment and structure
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ... Length = 364 Back     alignment and structure
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* Length = 365 Back     alignment and structure
>3rnd_A NADPH dehydrogenase 1; TIM barrel, oxidoreductase; HET: FMN 3RN; 1.40A {Saccharomyces pastorianus} PDB: 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A* Length = 399 Back     alignment and structure
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} Length = 361 Back     alignment and structure
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A* Length = 407 Back     alignment and structure
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A* Length = 379 Back     alignment and structure
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus} Length = 419 Back     alignment and structure
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A* Length = 338 Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Length = 340 Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A* Length = 349 Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} PDB: 3krz_A* Length = 343 Back     alignment and structure
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A* Length = 363 Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Length = 671 Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Length = 729 Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Length = 690 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query205
3kru_A 343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 100.0
3gr7_A 340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 100.0
3hgj_A 349 Chromate reductase; TIM barrel, oxidoreductase; HE 100.0
3l5l_A 363 Xenobiotic reductase A; TIM barrel, oxidoreductase 100.0
4a3u_A 358 NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET 100.0
4gbu_A 400 NADPH dehydrogenase 1; alpha/beta barrel, enenone 100.0
4ab4_A 362 Xenobiotic reductase B; oxidoreductase, OLD yellow 100.0
3gka_A 361 N-ethylmaleimide reductase; decode biostructures, 100.0
3tjl_A 407 NADPH dehydrogenase; OLD yellow enzyme, flavin mon 100.0
3l5a_A 419 NADH/flavin oxidoreductase/NADH oxidase; OLD yello 100.0
3aty_A 379 Tcoye, prostaglandin F2A synthase; alpha/beta barr 100.0
2hsa_B 402 12-oxophytodienoate reductase 3; alpha beta 8 barr 100.0
1icp_A 376 OPR1, 12-oxophytodienoate reductase 1; beta-alpha- 100.0
1z41_A 338 YQJM, probable NADH-dependent flavin oxidoreductas 100.0
2r14_A 377 Morphinone reductase; H-tunnelling, flavoprotein, 100.0
1vyr_A 364 Pentaerythritol tetranitrate reductase; oxidoreduc 100.0
2gou_A 365 Oxidoreductase, FMN-binding; OLD yeallow enzyme, f 100.0
1ps9_A 671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 100.0
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 100.0
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 100.0
1vhn_A 318 Putative flavin oxidoreducatase; structural genomi 98.94
3b0p_A 350 TRNA-dihydrouridine synthase; TIM barrel, oxidored 98.93
1f76_A 336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 98.92
1jub_A 311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 98.13
1ep3_A 311 Dihydroorotate dehydrogenase B (PYRD subunit); het 98.13
1tv5_A 443 Dhodehase, dihydroorotate dehydrogenase homolog, m 98.04
2e6f_A 314 Dihydroorotate dehydrogenase; chagas disease, pyri 98.04
3oix_A 345 Putative dihydroorotate dehydrogenase; dihydrooro 95.87
4ef8_A 354 Dihydroorotate dehydrogenase; phenyl isothiocyanat 94.24
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 92.69
1kbi_A 511 Cytochrome B2, L-LCR; flavocytochrome B2, electron 92.2
2nli_A368 Lactate oxidase; flavoenzyme, FMN, D-lactate, oxid 91.68
4dpp_A 360 DHDPS 2, dihydrodipicolinate synthase 2, chloropla 85.85
2o56_A 407 Putative mandelate racemase; dehydratase, structur 83.62
2gl5_A 410 Putative dehydratase protein; structural genomics, 82.98
3i65_A 415 Dihydroorotate dehydrogenase homolog, mitochondria 82.7
2ox4_A 403 Putative mandelate racemase; enolase, dehydratase, 82.43
3zwt_A 367 Dihydroorotate dehydrogenase (quinone), mitochond; 81.74
1xky_A 301 Dihydrodipicolinate synthase; TIM barrel, , lysine 81.17
3dz1_A 313 Dihydrodipicolinate synthase; lysine biosynthesis, 81.15
3fkr_A 309 L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL f 81.13
2wkj_A 303 N-acetylneuraminate lyase; directed evolution, sia 80.8
3a5f_A 291 Dihydrodipicolinate synthase; TIM barrel, enzyme, 80.44
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
Probab=100.00  E-value=7.7e-56  Score=387.05  Aligned_cols=170  Identities=31%  Similarity=0.444  Sum_probs=158.7

Q ss_pred             cCCCCcceeCCeecCCceEeCCCCCCccC-CCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHH
Q 037727           23 IPLLTPYKMGSFNLSHRIVLAPLSRMRSY-DYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVE  100 (205)
Q Consensus        23 ~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~-~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~  100 (205)
                      ++||+|++||+++|||||||+||+++++. +|.||+.+++||++||+|| ||||+|+++|++.|+.++++++||+|++++
T Consensus         2 ~~Lf~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~   81 (343)
T 3kru_A            2 SILHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVK   81 (343)
T ss_dssp             CGGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHH
T ss_pred             ccccccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHH
Confidence            57999999999999999999999998875 9999999999999999999 999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 037727          101 AWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIA  180 (205)
Q Consensus       101 ~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~A  180 (205)
                      +||+|+++||++|+++++||+|+||++..    .+..+++||+++...         ....|++||++||+++|++|++|
T Consensus        82 ~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~----~g~~~~apS~i~~~~---------~~~~p~~mt~~eI~~ii~~f~~A  148 (343)
T 3kru_A           82 ELKKIVDICKANGAVMGIQLAHAGRKCNI----SYEDVVGPSPIKAGD---------RYKLPRELSVEEIKSIVKAFGEA  148 (343)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEECCGGGCCC----TTSCCEESSSCCSST---------TSCCCEECCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCceEeeehhhccCccCc----chhhccCCCcCCCCc---------cccCchhcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999998865    245689999877532         23579999999999999999999


Q ss_pred             HHHHHHccccee---eccchhhhhhcCC
Q 037727          181 ARNAIEAEIKSS---KQLGYVLEIECSY  205 (205)
Q Consensus       181 A~ra~~AGfDgV---~ahGyLl~qFlSp  205 (205)
                      |+||++||||||   +||||||+|||||
T Consensus       149 A~~a~~aGfDgVEih~ahGYLl~qFlsp  176 (343)
T 3kru_A          149 AKRANLAGYDVVEIHAAHGYLIHEFLSP  176 (343)
T ss_dssp             HHHHHHHTCSEEEEEECTTSHHHHHHCT
T ss_pred             HhhccccCCceEEEecccchhHHHhhcc
Confidence            999999999999   9999999999998
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A* Back     alignment and structure
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis} Back     alignment and structure
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A* Back     alignment and structure
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440} Back     alignment and structure
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0 Back     alignment and structure
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A* Back     alignment and structure
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus} Back     alignment and structure
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A* Back     alignment and structure
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* Back     alignment and structure
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A* Back     alignment and structure
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A* Back     alignment and structure
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* Back     alignment and structure
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ... Back     alignment and structure
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1 Back     alignment and structure
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C* Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A* Back     alignment and structure
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1 Back     alignment and structure
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A* Back     alignment and structure
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans} Back     alignment and structure
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A* Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* Back     alignment and structure
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A* Back     alignment and structure
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A* Back     alignment and structure
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} Back     alignment and structure
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* Back     alignment and structure
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* Back     alignment and structure
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} Back     alignment and structure
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... Back     alignment and structure
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A* Back     alignment and structure
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A Back     alignment and structure
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A Back     alignment and structure
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 205
d1icpa_ 364 c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, O 5e-38
d1q45a_ 380 c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, O 4e-36
d1gwja_ 374 c.1.4.1 (A:) Morphinone reductase {Pseudomonas put 2e-33
d1vyra_ 363 c.1.4.1 (A:) Pentaerythritol tetranirate reductase 3e-30
d1oyaa_ 399 c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast 1e-27
d1z41a1 337 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacill 2e-27
d1ps9a1 330 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-ter 6e-21
d1djqa1 340 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N- 6e-16
>d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} Length = 364 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 12-oxophytodienoate reductase (OPR, OYE homolog)
species: Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]

 Score =  132 bits (333), Expect = 5e-38
 Identities = 121/191 (63%), Positives = 144/191 (75%), Gaps = 8/191 (4%)

Query: 21  NIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVV 80
           + IPL++P KMG F L HR+VLAPL+R RSY YIPQPHAIL+YSQR+T GG LI EA+V+
Sbjct: 3   DKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVI 62

Query: 81  SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPIS 140
           SETG GYK  PGIWTKEQVEAWKPIV  V AKGGIFFCQ+ H GR+SN+DFQPNG+ PIS
Sbjct: 63  SETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPIS 122

Query: 141 YSDKPLKNQ-PNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEA-----EIKSSKQ 194
            +D+ L  Q  + G + A FT PRRL T EIPQIVN+FR+AARNAIEA     EI  +  
Sbjct: 123 CTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAH- 181

Query: 195 LGYVLEIECSY 205
            GY+++     
Sbjct: 182 -GYLIDQFMKD 191
>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} Length = 380 Back     information, alignment and structure
>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} Length = 374 Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Length = 363 Back     information, alignment and structure
>d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} Length = 399 Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Length = 337 Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 330 Back     information, alignment and structure
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query205
d1ps9a1 330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 100.0
d1z41a1 337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 100.0
d1gwja_ 374 Morphinone reductase {Pseudomonas putida [TaxId: 3 100.0
d1oyaa_ 399 Old yellow enzyme (OYE) {Lager yeast (Saccharomyce 100.0
d1q45a_ 380 12-oxophytodienoate reductase (OPR, OYE homolog) { 100.0
d1icpa_ 364 12-oxophytodienoate reductase (OPR, OYE homolog) { 100.0
d1vyra_ 363 Pentaerythritol tetranirate reductase {Enterobacte 100.0
d1djqa1 340 Trimethylamine dehydrogenase, N-terminal domain {M 100.0
d1xkya1 292 Dihydrodipicolinate synthase {Bacillus anthracis [ 85.06
d1ep3a_ 311 Dihydroorotate dehydrogenase {Lactococcus lactis, 84.01
d1f74a_ 293 N-acetylneuraminate lyase {Haemophilus influenzae 82.19
d1xxxa1 296 Dihydrodipicolinate synthase {Mycobacterium tuberc 81.98
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 2,4-dienoyl-CoA reductase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.9e-55  Score=377.78  Aligned_cols=170  Identities=21%  Similarity=0.285  Sum_probs=157.8

Q ss_pred             CCcCCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHH
Q 037727           21 NIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQV   99 (205)
Q Consensus        21 ~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i   99 (205)
                      .|++||+|++||+++|||||||+||+++++.++.+++++++||++||+|| ||||+|+++|++.+..+++++++++|+++
T Consensus         1 ~y~~LF~P~~ig~~~lkNRiv~apm~~~~~~~~~~~~~~~~yy~~rA~gG~glIi~e~~~v~~~~~~~~~~~~~~~d~~i   80 (330)
T d1ps9a1           1 SYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQI   80 (330)
T ss_dssp             CCTTTTCCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGH
T ss_pred             CchhhCCCccCCCEEeCCCcEeCCCCCCcCCCCCCcHHHHHHHHHHHhCCeEEEEEeeeEEcCCccccCCCcccCCcccc
Confidence            38999999999999999999999999888777889999999999999999 99999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 037727          100 EAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRI  179 (205)
Q Consensus       100 ~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~  179 (205)
                      ++||+|+++||++|+++++||+|+||.+...      .+++||.++.+.         ....|++||++||++||++|++
T Consensus        81 ~~~k~l~~~vh~~g~~i~~QL~H~Gr~~~~~------~~~~ps~~~~~~---------~~~~p~~lt~~eI~~ii~~f~~  145 (330)
T d1ps9a1          81 PHHRTITEAVHQEGGKIALQILHTGRYSYQP------HLVAPSALQAPI---------NRFVPHELSHEEILQLIDNFAR  145 (330)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCCGGGSBST------TCEESSSCCCTT---------CSSCCEECCHHHHHHHHHHHHH
T ss_pred             cccccceeeeecCCCeehhhhhhcCCccccC------cccCCccccccc---------cCCCChhcChhHHHHHHHHHHH
Confidence            9999999999999999999999999988654      357888766532         3367999999999999999999


Q ss_pred             HHHHHHHccccee---eccchhhhhhcCC
Q 037727          180 AARNAIEAEIKSS---KQLGYVLEIECSY  205 (205)
Q Consensus       180 AA~ra~~AGfDgV---~ahGyLl~qFlSp  205 (205)
                      ||+||++||||||   +||||||+|||||
T Consensus       146 aA~ra~~AGfDgVEIh~ahGyLl~qFlSp  174 (330)
T d1ps9a1         146 CAQLAREAGYDGVEVMGSEGYLINEFLTL  174 (330)
T ss_dssp             HHHHHHHTTCSEEEEEECBTSHHHHHHCT
T ss_pred             HHHHHHHhCcCeeeeccchHHHHHHHHHh
Confidence            9999999999999   9999999999998
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} Back     information, alignment and structure
>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} Back     information, alignment and structure
>d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure