Citrus Sinensis ID: 037731

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
Protein Sequence
IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE
Secondary Structure (PSIPRED)
cEEEEcccccEEEEEEccccccccccEEEEccccEEEEEccccccccccccccccccccccccEEEEEEEEcccccccccccccHHHHHHccccHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cEEEEcccccEEEEEEccccccccEEEEEEcccEEEEEEEcccccccccccEEEcccccccccEEEEEEEEcccccHcHcccccHHHHHHHcHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
ifelndkdgkiKLTCLgndlgnnqqpqytvppnvwfgsfptndfhispdgavskvesrdaeshyslvgctcapafqfedfelakrsdlvssfpnhaplislltfpe
Flexible Loop (DISEMBL)
ifelndkdgkiKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLvssfpnhaplislltfpe
Low Complexity Region (SEG)
IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE
Disordered region (IsUnstruct)
**********IKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISP*************SHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLL****
Disordered Region (DISOPRED)
IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFP*
Disordered Region (DISEMBL)
IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAV***********YSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE
Disordered Region (DISPRO)
IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTF**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
224069168	189	predicted protein [Populus trichocarpa]	1.0	0.560	0.738	4e-40
449452588	154	PREDICTED: uncharacterized protein LOC10	0.971	0.668	0.721	7e-39
449452586	189	PREDICTED: uncharacterized protein LOC10	0.971	0.544	0.721	1e-38
255550397	140	conserved hypothetical protein [Ricinus	0.905	0.685	0.783	1e-38
240254115	192	uncharacterized protein [Arabidopsis tha	0.990	0.546	0.700	2e-37
8778289	197	F14D16.29 [Arabidopsis thaliana]	0.990	0.532	0.700	2e-37
297850296	193	F14D16.29 [Arabidopsis lyrata subsp. lyr	0.990	0.544	0.691	3e-36
225444677	189	PREDICTED: uncharacterized protein LOC10	1.0	0.560	0.682	5e-36
357479413	190	hypothetical protein MTR_4g125100 [Medic	1.0	0.557	0.644	1e-34
351725619	195	uncharacterized protein LOC100306492 [Gl	1.0	0.543	0.616	9e-33

>gi|224069168|ref|XP_002326291.1| predicted protein [Populus trichocarpa] gi|118485340|gb|ABK94529.1| unknown [Populus trichocarpa] gi|222833484|gb|EEE71961.1| predicted protein [Populus trichocarpa]

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/107 (73%), Positives = 91/107 (85%), Gaps = 1/107 (0%)

Query: 1   IFELNDKDGKIKLTCLGNDL-GNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
           I ELN+K G++KLT +G+DL G+NQQ QYTVP NVWFG+FPT D++ISPD  V+K   RD
Sbjct: 83  ILELNEKTGQVKLTSIGSDLVGDNQQLQYTVPRNVWFGAFPTKDYNISPDSMVAKTAPRD 142

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           AESHYSLVGCTCAPAFQFEDFELAKRS L+S FPN+ PLISLLT PE
Sbjct: 143 AESHYSLVGCTCAPAFQFEDFELAKRSYLISRFPNYEPLISLLTLPE 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452588|ref|XP_004144041.1| PREDICTED: uncharacterized protein LOC101210771 isoform 2 [Cucumis sativus] gi|449500513|ref|XP_004161118.1| PREDICTED: uncharacterized protein LOC101231394 isoform 2 [Cucumis sativus]

 Score =  164 bits (414), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 75/104 (72%), Positives = 90/104 (86%), Gaps = 1/104 (0%)

Query: 1   IFELNDKDGKIKLTCLGNDL-GNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
           + ELN+KDG++KLTCLG+DL G+NQ PQYTVPPNVWFG+FPT DF+IS DG ++K   RD
Sbjct: 48  VLELNEKDGRVKLTCLGSDLIGDNQLPQYTVPPNVWFGAFPTKDFNISADGTLTKAAPRD 107

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLT 103
           +E+HYSLVGC+CAPAFQFEDFELAKRSDLVS FP+    +SLLT
Sbjct: 108 SENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSEAFVSLLT 151

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452586|ref|XP_004144040.1| PREDICTED: uncharacterized protein LOC101210771 isoform 1 [Cucumis sativus] gi|449500509|ref|XP_004161117.1| PREDICTED: uncharacterized protein LOC101231394 isoform 1 [Cucumis sativus]

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/104 (72%), Positives = 90/104 (86%), Gaps = 1/104 (0%)

Query: 1   IFELNDKDGKIKLTCLGNDL-GNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
           + ELN+KDG++KLTCLG+DL G+NQ PQYTVPPNVWFG+FPT DF+IS DG ++K   RD
Sbjct: 83  VLELNEKDGRVKLTCLGSDLIGDNQLPQYTVPPNVWFGAFPTKDFNISADGTLTKAAPRD 142

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLT 103
           +E+HYSLVGC+CAPAFQFEDFELAKRSDLVS FP+    +SLLT
Sbjct: 143 SENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSEAFVSLLT 186

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550397|ref|XP_002516249.1| conserved hypothetical protein [Ricinus communis] gi|223544735|gb|EEF46251.1| conserved hypothetical protein [Ricinus communis]

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/97 (78%), Positives = 86/97 (88%), Gaps = 1/97 (1%)

Query: 11  IKLTCLGNDL-GNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGC 69
           +KLTCLG+DL G NQQPQYTVPPNVWFG+FPTND+ I+PD AV+K   RD ESHYSLVGC
Sbjct: 29  VKLTCLGSDLIGANQQPQYTVPPNVWFGAFPTNDYIITPDEAVAKAAPRDTESHYSLVGC 88

Query: 70  TCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           TCAPAFQFEDFELAKRS+L+S FPNH  LISL+TFP+
Sbjct: 89  TCAPAFQFEDFELAKRSELISRFPNHEHLISLMTFPD 125

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240254115|ref|NP_564073.4| uncharacterized protein [Arabidopsis thaliana] gi|26449699|dbj|BAC41973.1| unknown protein [Arabidopsis thaliana] gi|332191687|gb|AEE29808.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 89/107 (83%), Gaps = 2/107 (1%)

Query: 1   IFELNDKDGKIKLTCLGNDL-GNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
           + EL D DGK+K TCLG DL   +Q+PQYTVPPNVWFGSFPT D H S DGA+ K E+RD
Sbjct: 87  VVELYD-DGKLKFTCLGPDLFEGDQKPQYTVPPNVWFGSFPTKDVHFSQDGALLKAEARD 145

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           +E+H+SLVGCTCAPAFQFEDFELAKRSDL+S FP H  LI++L++PE
Sbjct: 146 SENHFSLVGCTCAPAFQFEDFELAKRSDLLSRFPQHESLITMLSYPE 192

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8778289|gb|AAF79298.1|AC068602_21 F14D16.29 [Arabidopsis thaliana]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 89/107 (83%), Gaps = 2/107 (1%)

Query: 1   IFELNDKDGKIKLTCLGNDL-GNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
           + EL D DGK+K TCLG DL   +Q+PQYTVPPNVWFGSFPT D H S DGA+ K E+RD
Sbjct: 92  VVELYD-DGKLKFTCLGPDLFEGDQKPQYTVPPNVWFGSFPTKDVHFSQDGALLKAEARD 150

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           +E+H+SLVGCTCAPAFQFEDFELAKRSDL+S FP H  LI++L++PE
Sbjct: 151 SENHFSLVGCTCAPAFQFEDFELAKRSDLLSRFPQHESLITMLSYPE 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850296|ref|XP_002893029.1| F14D16.29 [Arabidopsis lyrata subsp. lyrata] gi|297338871|gb|EFH69288.1| F14D16.29 [Arabidopsis lyrata subsp. lyrata]

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 87/107 (81%), Gaps = 2/107 (1%)

Query: 1   IFELNDKDGKIKLTCLG-NDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
           + EL D DGK+K TCLG N L  +Q+PQYTVPPNVWFGSFPT D H S DG + K E RD
Sbjct: 88  VVELYD-DGKLKFTCLGPNLLEGDQKPQYTVPPNVWFGSFPTKDVHFSQDGTLLKAEPRD 146

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           +E+H+SLVGCTCAPAFQFEDFELAKRSDL+S FP H  LI++L++PE
Sbjct: 147 SENHFSLVGCTCAPAFQFEDFELAKRSDLLSRFPQHESLITMLSYPE 193

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444677|ref|XP_002277428.1| PREDICTED: uncharacterized protein LOC100255995 [Vitis vinifera] gi|297738538|emb|CBI27783.3| unnamed protein product [Vitis vinifera]

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/107 (68%), Positives = 86/107 (80%), Gaps = 1/107 (0%)

Query: 1   IFELNDKDGKIKLTCLGND-LGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
           + ELN+KDGK+KLTCLG D LG+NQQ QYTV PNVWFG+FPT D  I P+G   K  +RD
Sbjct: 83  VVELNEKDGKVKLTCLGPDILGDNQQLQYTVEPNVWFGAFPTKDLSILPNGVPEKNPARD 142

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
            E HYSLVGCTCAPAFQFEDFEL KRS+L+S FP++   +SLLT+PE
Sbjct: 143 GEHHYSLVGCTCAPAFQFEDFELGKRSELISQFPDNELFVSLLTYPE 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479413|ref|XP_003609992.1| hypothetical protein MTR_4g125100 [Medicago truncatula] gi|355511047|gb|AES92189.1| hypothetical protein MTR_4g125100 [Medicago truncatula] gi|388522751|gb|AFK49437.1| unknown [Medicago truncatula]

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 83/107 (77%), Gaps = 1/107 (0%)

Query: 1   IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPD-GAVSKVESRD 59
           + ELN+KD  +K TCLG+DL  +Q PQYTVPPNVWFGSFPT+DF +S + G+  K   RD
Sbjct: 84  VVELNEKDSSVKFTCLGSDLTKDQTPQYTVPPNVWFGSFPTSDFAVSANGGSFVKGSERD 143

Query: 60  AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
            E+HYSLVGCTCAP FQF+DFELAKRS L+S FP    L++ LTFPE
Sbjct: 144 GETHYSLVGCTCAPGFQFQDFELAKRSYLISRFPQLESLVTTLTFPE 190

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725619|ref|NP_001235819.1| uncharacterized protein LOC100306492 [Glycine max] gi|255628703|gb|ACU14696.1| unknown [Glycine max]

 Score =  144 bits (362), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 83/112 (74%), Gaps = 6/112 (5%)

Query: 1   IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSK------ 54
           + ELN+KDG +K TCLG+DL  NQ PQYTVPPNVWFGSFPT DF  S DG          
Sbjct: 84  VVELNEKDGSVKFTCLGSDLTQNQVPQYTVPPNVWFGSFPTKDFTYSADGVFGSAEAEAE 143

Query: 55  VESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
            E+RD+E +Y+LVGCTCAPAFQ++DFELAK S L++ FP   PL++ LTFPE
Sbjct: 144 AEARDSERNYTLVGCTCAPAFQYQDFELAKPSYLLARFPQFHPLVAALTFPE 195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
TAIR|locus:2011251	192	AT1G19130 "AT1G19130" [Arabido	0.990	0.546	0.700	5.5e-38
UNIPROTKB|Q74GS2	243	GSU0173 "Cupin superfamily bar	0.377	0.164	0.6	2.4e-13
TIGR_CMR|GSU_0173	243	GSU_0173 "conserved hypothetic	0.377	0.164	0.6	2.4e-13
UNIPROTKB|Q8EIN8	160	SO_0799 "Uncharacterized prote	0.405	0.268	0.418	3.9e-11
TIGR_CMR|SO_0799	160	SO_0799 "conserved hypothetica	0.405	0.268	0.418	3.9e-11

TAIR|locus:2011251 AT1G19130 "AT1G19130" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 75/107 (70%), Positives = 89/107 (83%)

Query:     1 IFELNDKDGKIKLTCLGNDL-GNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRD 59
             + EL D DGK+K TCLG DL   +Q+PQYTVPPNVWFGSFPT D H S DGA+ K E+RD
Sbjct:    87 VVELYD-DGKLKFTCLGPDLFEGDQKPQYTVPPNVWFGSFPTKDVHFSQDGALLKAEARD 145

Query:    60 AESHYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
             +E+H+SLVGCTCAPAFQFEDFELAKRSDL+S FP H  LI++L++PE
Sbjct:   146 SENHFSLVGCTCAPAFQFEDFELAKRSDLLSRFPQHESLITMLSYPE 192

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|Q74GS2 GSU0173 "Cupin superfamily barrel domain protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 130 (50.8 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
 Identities = 24/40 (60%), Positives = 28/40 (70%)

Query:    64 YSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLT 103
             YSLVGCT AP F F DFE+  R+DL+  FP HA +I  LT
Sbjct:   200 YSLVGCTVAPGFDFADFEMGSRADLLGRFPTHAGIIRRLT 239

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_0173 GSU_0173 "conserved hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 130 (50.8 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
 Identities = 24/40 (60%), Positives = 28/40 (70%)

Query:    64 YSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLT 103
             YSLVGCT AP F F DFE+  R+DL+  FP HA +I  LT
Sbjct:   200 YSLVGCTVAPGFDFADFEMGSRADLLGRFPTHAGIIRRLT 239

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8EIN8 SO_0799 "Uncharacterized protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 104 (41.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
 Identities = 18/43 (41%), Positives = 28/43 (65%)

Query:    64 YSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
             +SLVGC  +P F F+DFEL  +  L++ +P H  ++  L+ PE
Sbjct:   116 FSLVGCMVSPGFTFDDFELFSQEALLAMYPQHKAVVQKLSRPE 158

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_0799 SO_0799 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 104 (41.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
 Identities = 18/43 (41%), Positives = 28/43 (65%)

Query:    64 YSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
             +SLVGC  +P F F+DFEL  +  L++ +P H  ++  L+ PE
Sbjct:   116 FSLVGCMVSPGFTFDDFELFSQEALLAMYPQHKAVVQKLSRPE 158

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_280021 SubName- Full=Putative uncharacterized protein; (189 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	106
COG3542	162	COG3542, COG3542, Uncharacterized conserved protei	5e-24
pfam06172	139	pfam06172, Cupin_5, Cupin superfamily (DUF985)	2e-20

>gnl|CDD|226072 COG3542, COG3542, Uncharacterized conserved protein [Function unknown]

 Score = 89.1 bits (221), Expect = 5e-24
 Identities = 35/96 (36%), Positives = 43/96 (44%), Gaps = 18/96 (18%)

Query: 8   DGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLV 67
           DG  +   LG DL   ++PQY VP   W+ S                         Y+LV
Sbjct: 83  DGGAESFTLGPDLEKGERPQYVVPAGTWWASA------------------VSLGEDYTLV 124

Query: 68  GCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLT 103
           GCT AP F FEDFELA+  DL+  +P  A  I  L 
Sbjct: 125 GCTVAPGFDFEDFELAEPEDLLKWYPGPAEAIERLA 160

Length = 162

>gnl|CDD|218924 pfam06172, Cupin_5, Cupin superfamily (DUF985)

 Score = 79.3 bits (196), Expect = 2e-20
 Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 18/77 (23%)

Query: 8   DGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLV 67
           DG+++ T LG DL   ++PQY VP  VWF S                    ++   +SLV
Sbjct: 81  DGELETTVLGLDLAAGERPQYVVPAGVWFASR------------------LESLGGFSLV 122

Query: 68  GCTCAPAFQFEDFELAK 84
           GCT AP F FEDFELA+
Sbjct: 123 GCTVAPGFDFEDFELAE 139

Family of uncharacterized proteins found in bacteria and eukaryotes that belongs to the Cupin superfamily. Length = 139

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	106
COG3542	162	Uncharacterized conserved protein [Function unknow	99.96
PF06172	139	Cupin_5: Cupin superfamily (DUF985); InterPro: IPR	99.93

>COG3542 Uncharacterized conserved protein [Function unknown]

Probab=99.96  E-value=6.8e-29  Score=183.52  Aligned_cols=82  Identities=44%  Similarity=0.801  Sum_probs=74.7

Q ss_pred             EeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCcccc
Q 037731            4 LNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELA   83 (106)
Q Consensus         4 l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Dfe~~   83 (106)
                      +.. ||..+..+||+|+.+||++|++||+|+|++|+...                  +.+|+||||||+|||+|+||+|+
T Consensus        80 l~~-dG~~~s~~LG~d~~~Ge~~Q~vVP~g~w~aS~~~~------------------g~~~tLVgCtVaPGFdF~~Fela  140 (162)
T COG3542          80 LSE-DGGAESFTLGPDLEKGERPQYVVPAGTWWASAVSL------------------GEDYTLVGCTVAPGFDFEDFELA  140 (162)
T ss_pred             EEe-CCCeEEEEecccccCCceeEEEEeCCcEEEEEEec------------------CCCceEEEEEecCCccchhcccc
Confidence            444 89999999999999999999999999888777642                  23799999999999999999999


Q ss_pred             ChhchhhhCCCcHHHHhhhCC
Q 037731           84 KRSDLVSSFPNHAPLISLLTF  104 (106)
Q Consensus        84 ~~~~L~~~~P~~~~~I~~lt~  104 (106)
                      ++++|++.||.++++|.+|++
T Consensus       141 ~~~dlL~~~p~~~~~ie~l~~  161 (162)
T COG3542         141 EPEDLLKWYPGPAEAIERLAL  161 (162)
T ss_pred             CchhhhhcCCCcHHHHHHHhh
Confidence            999999999999999999986

>PF06172 Cupin_5: Cupin superfamily (DUF985); InterPro: IPR009327 This is a family of uncharacterised proteins found in bacteria and eukaryotes

Probab=99.93  E-value=1.2e-26  Score=168.32  Aligned_cols=65  Identities=45%  Similarity=0.790  Sum_probs=54.9

Q ss_pred             CEEEeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCc
Q 037731            1 IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDF   80 (106)
Q Consensus         1 ~~~l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Df   80 (106)
                      +++|+| ||++++++||+|+++||++|++||+|+||||++..                  .++|+||||||+|||+|+||
T Consensus        75 l~~i~~-dg~~~~~~LG~d~~~g~~~q~vVp~G~W~aa~l~~------------------~~~y~Lvsc~VaPGF~f~df  135 (139)
T PF06172_consen   75 LHLIDP-DGSYETVVLGPDLAAGERPQVVVPAGTWQAAELEP------------------EGDYSLVSCTVAPGFDFEDF  135 (139)
T ss_dssp             EEEECT-TSTEEEEEESSTTCTTEBSEEEE-TTSEEEEEECE------------------SSSEEEEEEEESSC--GGGE
T ss_pred             EEEEcC-CCCeEEEEECCCCCCCceEEEEECCCEEEEccccC------------------CCCEEEEEEEEcCCCchHHc
Confidence            467886 99999999999999999999999999999998742                  36899999999999999999


Q ss_pred             cccC
Q 037731           81 ELAK   84 (106)
Q Consensus        81 e~~~   84 (106)
                      +|++
T Consensus       136 el~~  139 (139)
T PF06172_consen  136 ELAK  139 (139)
T ss_dssp             EE--
T ss_pred             EecC
Confidence            9974

; PDB: 1ZNP_G 1XE8_B 1XE7_A 3M3I_F 3LOI_A 3LZZ_B 1YUD_D.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	106
1yud_A	170	X-ray Crystal Structure Of Protein So0799 From Shew		1e-09
3m3i_A	225	Hypothetical Protein From Leishmania Major Length =		8e-08
3loi_A	172	Crystal Structures Of Cupin Superfamily Bbduf985 Fr		8e-06

>pdb|1YUD|A Chain A, X-ray Crystal Structure Of Protein So0799 From Shewanella Oneidensis. Northeast Structural Genomics Consortium Target Sor12. Length = 170

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 8   DGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLV 67
           +G++    LG DL   ++PQ+ VP    FGS    D                    +SLV
Sbjct: 89  EGELTTAQLGLDLAAGERPQFLVPKGCIFGSAXNQD-------------------GFSLV 129
Query: 68  GCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           GC  +P F F+DFEL  +  L++ +P H  ++  L+ PE
Sbjct: 130 GCXVSPGFTFDDFELFSQEALLAXYPQHKAVVQKLSRPE 168

>pdb|3M3I|A Chain A, Hypothetical Protein From Leishmania Major Length = 225

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 12  KLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTC 71
           +   +G  +   +  QYTVP    FGS       ++ DGA       D ++ YSLV C  
Sbjct: 132 RRVLVGARVERGELLQYTVPGGAIFGS------SVAADGA-------DGQAGYSLVSCIV 178
Query: 72  APAFQFEDFELAKRSDLVSSFPNHAPLISLLTF 104
           +P F + DFE+  ++ L+  +P H  +I  + +
Sbjct: 179 SPGFDYRDFEIFTQAQLMELYPQHEAVIKQMAY 211

>pdb|3LOI|A Chain A, Crystal Structures Of Cupin Superfamily Bbduf985 From Branch Belcheri Tsingtauense In The Apo And Gdp-Bound Forms Length = 172

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 22/97 (22%)
Query: 8   DGKIKLTCLGNDLGN-NQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSL 66
           DG    + LGN L +   + Q  VP  VWF            DG             Y L
Sbjct: 93  DGSYSCSILGNPLEHPEARHQVVVPRRVWFAQ--------EVDG-------------YCL 131
Query: 67  VGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLT 103
                AP F F+DF L KR +L+  +P H  +I   T
Sbjct: 132 ASVLVAPGFDFKDFSLGKREELIKEYPQHRDVIMRCT 168

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	106
3m3i_A	225	Putative uncharacterized protein; PFAM:PF06172, st	8e-26
1yud_A	170	Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, p	8e-25
1xe7_A	203	YML079WP, hypothetical 22.5 kDa protein in TUB1-CP	1e-21
3loi_A	172	Putative uncharacterized protein; beta barrel, unk	2e-19
1znp_A	154	Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0,	2e-18

>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major} Length = 225

 Score = 94.8 bits (235), Expect = 8e-26
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 13/104 (12%)

Query: 3   ELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAES 62
           +   K    +   +G  +   +  QYTVP    FGS    D               D ++
Sbjct: 123 DARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAAD-------------GADGQA 169

Query: 63  HYSLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
            YSLV C  +P F + DFE+  ++ L+  +P H  +I  + +  
Sbjct: 170 GYSLVSCIVSPGFDYRDFEIFTQAQLMELYPQHEAVIKQMAYET 213

>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16 Length = 170

 Score = 91.0 bits (225), Expect = 8e-25
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 19/101 (18%)

Query: 6   DKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYS 65
             +G++    LG DL   ++PQ+ VP    FGS    D                    +S
Sbjct: 87  SPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQD-------------------GFS 127

Query: 66  LVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           LVGC  +P F F+DFEL  +  L++ +P H  ++  L+ PE
Sbjct: 128 LVGCMVSPGFTFDDFELFSQEALLAMYPQHKAVVQKLSRPE 168

>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A* Length = 203

 Score = 83.4 bits (205), Expect = 1e-21
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 17/100 (17%)

Query: 6   DKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYS 65
             DG++K   +G D  N +  Q+ VP  V+  SF   +               +   +  
Sbjct: 117 YPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPN---------------EEFDNGF 161

Query: 66  LVGCTCAPAFQFEDFELAKRSDLVSSF--PNHAPLISLLT 103
           L+     P F FED    K  D +     P  A  ++ L 
Sbjct: 162 LISEVVVPGFDFEDHTFLKGEDELKHLVGPEKAAELAFLA 201

>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} PDB: 3lzz_A* Length = 172

 Score = 77.4 bits (190), Expect = 2e-19
 Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 22/102 (21%)

Query: 6   DKDGKIKLTCLGNDLGNNQQ-PQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHY 64
             DG    + LGN L + +   Q  VP  VWF                           Y
Sbjct: 91  HPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEVD---------------------GY 129

Query: 65  SLVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
            L     AP F F+DF L KR +L+  +P H  +I   T  +
Sbjct: 130 CLASVLVAPGFDFKDFSLGKREELIKEYPQHRDVIMRCTSSD 171

>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16 Length = 154

 Score = 74.3 bits (182), Expect = 2e-18
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 4   LNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESH 63
           L+    +++   LG  +   ++PQ  VP N W  +    D                    
Sbjct: 77  LSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESLGD-------------------- 116

Query: 64  YSLVGCTCAPAFQFEDFELAKRSDLVSSFP 93
           ++LVGCT +P F F  F +A+        P
Sbjct: 117 FTLVGCTVSPGFAFSSFVMAEPGWSPGDAP 146

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	106
3loi_A	172	Putative uncharacterized protein; beta barrel, unk	100.0
1yud_A	170	Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, p	100.0
3m3i_A	225	Putative uncharacterized protein; PFAM:PF06172, st	100.0
1xe7_A	203	YML079WP, hypothetical 22.5 kDa protein in TUB1-CP	99.95
1znp_A	154	Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0,	99.94

>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*

Probab=100.00  E-value=5.2e-35  Score=217.96  Aligned_cols=84  Identities=35%  Similarity=0.637  Sum_probs=78.7

Q ss_pred             CEEEeCCCCcEEEEEeCCCCCCCc-cceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCC
Q 037731            1 IFELNDKDGKIKLTCLGNDLGNNQ-QPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFED   79 (106)
Q Consensus         1 ~~~l~~~dG~~~~~vLG~dl~~Ge-~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~D   79 (106)
                      +++|++ ||++++++||+|+.+|| +||++||+|+||+|++ +                    +|+||||||+|||+|+|
T Consensus        87 l~~~~~-dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--------------------~~~LVsctVaPGF~f~d  144 (172)
T 3loi_A           87 IHMIHP-DGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV-D--------------------GYCLASVLVAPGFDFKD  144 (172)
T ss_dssp             EEEECT-TSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE-S--------------------SEEEEEEEEESCCCGGG
T ss_pred             EEEEcC-CCceEEEEeCCCcccCCcceEEEECCCEEEEEEe-C--------------------CcEEEEEEEcCCccchh
Confidence            356776 99999999999999999 9999999999999997 3                    59999999999999999


Q ss_pred             ccccChhchhhhCCCcHHHHhhhCCCC
Q 037731           80 FELAKRSDLVSSFPNHAPLISLLTFPE  106 (106)
Q Consensus        80 fe~~~~~~L~~~~P~~~~~I~~lt~~~  106 (106)
                      |+|+++++|+++||+|+++|++||++|
T Consensus       145 fel~~~~~L~~~~P~~~~~I~~lt~~~  171 (172)
T 3loi_A          145 FSLGKREELIKEYPQHRDVIMRCTSSD  171 (172)
T ss_dssp             CEECCHHHHHHHCGGGHHHHHHTSCC-
T ss_pred             cEEcCHHHHHHHCchHHHHHHHhccCC
Confidence            999999999999999999999999975

>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16

Probab=100.00  E-value=6.6e-34  Score=211.59  Aligned_cols=85  Identities=35%  Similarity=0.741  Sum_probs=79.3

Q ss_pred             EEEeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCcc
Q 037731            2 FELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFE   81 (106)
Q Consensus         2 ~~l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Dfe   81 (106)
                      ++|++ ||++++++||+|+.+||+||++||+|+||+|++..                   ++|+||||||+|||+|+||+
T Consensus        84 ~l~~~-dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~-------------------g~~~LV~C~VaPGF~f~dfe  143 (170)
T 1yud_A           84 YMISP-EGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQ-------------------DGFSLVGCMVSPGFTFDDFE  143 (170)
T ss_dssp             EEECT-TSCEEEEEESSCTTTTEESCEEECTTCEEEEEESS-------------------SSEEEEEEEESSCCCGGGCC
T ss_pred             EEEcC-CCCEEEEEeCCCcccCceeEEEECCCCEEEEEECC-------------------CCcEEEEEEECCCccCCceE
Confidence            46676 99999999999999999999999999999999752                   36999999999999999999


Q ss_pred             ccChhchhhhCCCcHHHHhhhCCCC
Q 037731           82 LAKRSDLVSSFPNHAPLISLLTFPE  106 (106)
Q Consensus        82 ~~~~~~L~~~~P~~~~~I~~lt~~~  106 (106)
                      ++++++|+++||+++++|++||++|
T Consensus       144 l~~~~~L~~~~P~~~~~I~~lt~~~  168 (170)
T 1yud_A          144 LFSQEALLAMYPQHKAVVQKLSRPE  168 (170)
T ss_dssp             BCBHHHHHHSCCTTHHHHTTSCBCC
T ss_pred             EcCHHHHHhHCchhHHHHHHhhhcc
Confidence            9999999999999999999999875

>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}

Probab=100.00  E-value=2.9e-33  Score=215.81  Aligned_cols=83  Identities=30%  Similarity=0.596  Sum_probs=75.6

Q ss_pred             cEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCccccChhchh
Q 037731           10 KIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFELAKRSDLV   89 (106)
Q Consensus        10 ~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Dfe~~~~~~L~   89 (106)
                      .+++++||+|+.+||++|++||+|+||+|++.++.             +++.++|+||||||+|||+|+||+|+++++|+
T Consensus       130 ~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~-------------~~~~~~~sLVsCtVaPGFdF~DFel~~~~~L~  196 (225)
T 3m3i_A          130 VYRRVLVGARVERGELLQYTVPGGAIFGSSVAADG-------------ADGQAGYSLVSCIVSPGFDYRDFEIFTQAQLM  196 (225)
T ss_dssp             EEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSS-------------TTCSSSCEEEEEEEESCCCGGGCEECBHHHHH
T ss_pred             ceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCC-------------cCcCCCeEEEEEEEcCCccchhcEecCHHHHH
Confidence            78999999999999999999999999999987531             12334799999999999999999999999999


Q ss_pred             hhCCCcHHHHhhhCCC
Q 037731           90 SSFPNHAPLISLLTFP  105 (106)
Q Consensus        90 ~~~P~~~~~I~~lt~~  105 (106)
                      ++||+|+++|++||+.
T Consensus       197 ~~~P~~~~~I~~lt~~  212 (225)
T 3m3i_A          197 ELYPQHEAVIKQMAYE  212 (225)
T ss_dssp             HHCGGGHHHHHHHSBC
T ss_pred             HHCchHHHHHHHhchh
Confidence            9999999999999975

>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*

Probab=99.95  E-value=1.1e-28  Score=187.84  Aligned_cols=77  Identities=26%  Similarity=0.362  Sum_probs=68.0

Q ss_pred             EEEeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCcc
Q 037731            2 FELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFE   81 (106)
Q Consensus         2 ~~l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Dfe   81 (106)
                      ++|++ ||++++++||+|+.+||++|+|||+|+||+|++..+               +.-++|+||||||+|||+|+||+
T Consensus       114 ~li~~-dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~---------------~~~~~~tLVgCtVaPGFdF~dFe  177 (203)
T 1xe7_A          114 VLVYP-DGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPN---------------EEFDNGFLISEVVVPGFDFEDHT  177 (203)
T ss_dssp             EEECT-TSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCC---------------TTTTTCEEEEEEESSCCCGGGEE
T ss_pred             EEEcC-CCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCC---------------CCcccceEEEEEecCCccchhcE
Confidence            46776 999999999999999999999999999999998631               11134689999999999999999


Q ss_pred             ccChh-chhhhCCC
Q 037731           82 LAKRS-DLVSSFPN   94 (106)
Q Consensus        82 ~~~~~-~L~~~~P~   94 (106)
                      |++++ +|+++||+
T Consensus       178 l~~~~~~L~~~~P~  191 (203)
T 1xe7_A          178 FLKGEDELKHLVGP  191 (203)
T ss_dssp             ECCHHHHHHHHHCH
T ss_pred             ecCCcHHHHHHCCH
Confidence            99999 99999994

>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16

Probab=99.94  E-value=1.9e-27  Score=174.70  Aligned_cols=66  Identities=29%  Similarity=0.548  Sum_probs=60.0

Q ss_pred             EEEeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCcc
Q 037731            2 FELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDFE   81 (106)
Q Consensus         2 ~~l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Dfe   81 (106)
                      ++|.+ ||.+++++||+|+.+||+||+|||+|+||+|++.                    ++|+||||||+|||+|+||+
T Consensus        76 ~~~~~-dg~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~--------------------g~~~LVsCtVaPGF~f~dFe  134 (154)
T 1znp_A           76 HLSQD-GREVQTFTLGPAILEGERPQVIVPANCWQSAESL--------------------GDFTLVGCTVSPGFAFSSFV  134 (154)
T ss_dssp             EEESS-SSCCEEEEESSCTTTTEESEEEECTTCEEEEEES--------------------SSEEEEEEEESSCCCGGGEE
T ss_pred             EEEcC-CCcEEEEEeCCCcccCcccEEEEcCCEEEEeeEC--------------------CCeEEEEEEecCCCcccccE
Confidence            45555 9999999999999999999999999999999975                    36999999999999999999


Q ss_pred             ccChhch
Q 037731           82 LAKRSDL   88 (106)
Q Consensus        82 ~~~~~~L   88 (106)
                      |+++++.
T Consensus       135 l~~~~~~  141 (154)
T 1znp_A          135 MAEPGWS  141 (154)
T ss_dssp             ECCTTCC
T ss_pred             ecCCCCC
Confidence            9999754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	106
d1yuda1	158	b.82.1.16 (A:1-158) Hypothetical protein SO0799 {S	5e-27
d1xe7a_	194	b.82.1.16 (A:) Hypothetical protein YML079W {Baker	1e-24
d1znpa1	140	b.82.1.16 (A:4-143) Hypothetical protein Atu3615 {	3e-19

>d1yuda1 b.82.1.16 (A:1-158) Hypothetical protein SO0799 {Shewanella oneidensis [TaxId: 70863]} Length = 158

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: YML079-like
domain: Hypothetical protein SO0799
species: Shewanella oneidensis [TaxId: 70863]

 Score = 95.3 bits (237), Expect = 5e-27
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 19/101 (18%)

Query: 6   DKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYS 65
             +G++    LG DL   ++PQ+ VP    FGS    D                    +S
Sbjct: 77  SPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQD-------------------GFS 117

Query: 66  LVGCTCAPAFQFEDFELAKRSDLVSSFPNHAPLISLLTFPE 106
           LVGC  +P F F+DFEL  +  L++ +P H  ++  L+ PE
Sbjct: 118 LVGCMVSPGFTFDDFELFSQEALLAMYPQHKAVVQKLSRPE 158

>d1xe7a_ b.82.1.16 (A:) Hypothetical protein YML079W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 194

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: YML079-like
domain: Hypothetical protein YML079W
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 89.7 bits (222), Expect = 1e-24
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 17/100 (17%)

Query: 6   DKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYS 65
             DG++K   +G D  N +  Q+ VP  V+  SF   +               +   +  
Sbjct: 109 YPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPN---------------EEFDNGF 153

Query: 66  LVGCTCAPAFQFEDFELAKRSDLVSSF--PNHAPLISLLT 103
           L+     P F FED    K  D +     P  A  ++ L 
Sbjct: 154 LISEVVVPGFDFEDHTFLKGEDELKHLVGPEKAAELAFLA 193

>d1znpa1 b.82.1.16 (A:4-143) Hypothetical protein Atu3615 {Agrobacterium tumefaciens [TaxId: 358]} Length = 140

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: YML079-like
domain: Hypothetical protein Atu3615
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 74.8 bits (184), Expect = 3e-19
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 20/85 (23%)

Query: 1   IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDA 60
              L+    +++   LG  +   ++PQ  VP N W  +    D                 
Sbjct: 71  ALHLSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESLGD----------------- 113

Query: 61  ESHYSLVGCTCAPAFQFEDFELAKR 85
              ++LVGCT +P F F  F +A+ 
Sbjct: 114 ---FTLVGCTVSPGFAFSSFVMAEP 135

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	106
d1yuda1	158	Hypothetical protein SO0799 {Shewanella oneidensis	100.0
d1xe7a_	194	Hypothetical protein YML079W {Baker's yeast (Sacch	100.0
d1znpa1	140	Hypothetical protein Atu3615 {Agrobacterium tumefa	99.94

>d1yuda1 b.82.1.16 (A:1-158) Hypothetical protein SO0799 {Shewanella oneidensis [TaxId: 70863]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: YML079-like
domain: Hypothetical protein SO0799
species: Shewanella oneidensis [TaxId: 70863]

Probab=100.00  E-value=1.3e-35  Score=216.51  Aligned_cols=86  Identities=36%  Similarity=0.748  Sum_probs=80.4

Q ss_pred             CEEEeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCc
Q 037731            1 IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDF   80 (106)
Q Consensus         1 ~~~l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Df   80 (106)
                      |++|++ ||++++.+||+|+.+||++|++||+|+||+|++..                   ++|+||||||+|||+|+||
T Consensus        73 l~~~~~-~g~~~~~~lG~d~~~ge~~q~vVp~g~w~~a~~~~-------------------g~~sLvsctVaPGFdf~Df  132 (158)
T d1yuda1          73 IYMISP-EGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQ-------------------DGFSLVGCMVSPGFTFDDF  132 (158)
T ss_dssp             EEEECT-TSCEEEEEESSCTTTTEESCEEECTTCEEEEEESS-------------------SSEEEEEEEESSCCCGGGC
T ss_pred             EEEecC-CCCeEEeeeccCcCcCceeEEEEcCCCEEEEEEcC-------------------CCcEEEEEEEcCCccchhc
Confidence            467776 99999999999999999999999999999888642                   4799999999999999999


Q ss_pred             cccChhchhhhCCCcHHHHhhhCCCC
Q 037731           81 ELAKRSDLVSSFPNHAPLISLLTFPE  106 (106)
Q Consensus        81 e~~~~~~L~~~~P~~~~~I~~lt~~~  106 (106)
                      +++++++|+++||+|+++|++|||||
T Consensus       133 el~~~~~L~~~~P~~~~~I~~ltrpe  158 (158)
T d1yuda1         133 ELFSQEALLAMYPQHKAVVQKLSRPE  158 (158)
T ss_dssp             CBCBHHHHHHSCCTTHHHHTTSCBCC
T ss_pred             cccCHHHHHHHCchhHHHHHHHcCCC
Confidence            99999999999999999999999997

>d1xe7a_ b.82.1.16 (A:) Hypothetical protein YML079W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: YML079-like
domain: Hypothetical protein YML079W
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-34  Score=215.55  Aligned_cols=88  Identities=26%  Similarity=0.408  Sum_probs=80.5

Q ss_pred             CEEEeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCc
Q 037731            1 IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDF   80 (106)
Q Consensus         1 ~~~l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Df   80 (106)
                      +++|++ ||++++++||+|+.+||++|++||+|+||||++..+               ++.++|+||||||+|||+|+||
T Consensus       105 ~~~i~~-dG~~~~~~LG~d~~~Ge~~Q~vVp~G~W~aa~~~~~---------------~s~g~ysLvsCtVaPGF~f~Df  168 (194)
T d1xe7a_         105 YVLVYP-DGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPN---------------EEFDNGFLISEVVVPGFDFEDH  168 (194)
T ss_dssp             EEEECT-TSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCC---------------TTTTTCEEEEEEESSCCCGGGE
T ss_pred             EEEEcc-CCCeEEEEeccCcccCceeEEEecCCEEEEeeecCC---------------CCCCceEEEEeeecCCcchHhc
Confidence            367886 999999999999999999999999999999999753               2346799999999999999999


Q ss_pred             cccChhchhhhC--CCcHHHHhhhCC
Q 037731           81 ELAKRSDLVSSF--PNHAPLISLLTF  104 (106)
Q Consensus        81 e~~~~~~L~~~~--P~~~~~I~~lt~  104 (106)
                      +|+++++|+++|  |||+++|++||.
T Consensus       169 el~~~~eL~~~~~~Pqh~~~I~~Lt~  194 (194)
T d1xe7a_         169 TFLKGEDELKHLVGPEKAAELAFLAH  194 (194)
T ss_dssp             EECCHHHHHHHHHCHHHHHHTGGGCC
T ss_pred             cccCHHHHHHhhcCchHHHHHHHhcC
Confidence            999999999987  999999999984

>d1znpa1 b.82.1.16 (A:4-143) Hypothetical protein Atu3615 {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: YML079-like
domain: Hypothetical protein Atu3615
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.94  E-value=3e-27  Score=169.37  Aligned_cols=65  Identities=29%  Similarity=0.608  Sum_probs=59.5

Q ss_pred             CEEEeCCCCcEEEEEeCCCCCCCccceEEeCCCceEEeeeCCCCCCCCCCcccccccCCCCCceEEEEeeecCCcccCCc
Q 037731            1 IFELNDKDGKIKLTCLGNDLGNNQQPQYTVPPNVWFGSFPTNDFHISPDGAVSKVESRDAESHYSLVGCTCAPAFQFEDF   80 (106)
Q Consensus         1 ~~~l~~~dG~~~~~vLG~dl~~Ge~~Q~vVP~G~W~aA~~~~d~~~~~~~~~~k~~~~~~~~~ysLv~ctVaPGF~f~Df   80 (106)
                      ++++.+ ||++++.+||+|+.+||++|++||+|+||+|++.                    ++|+||||||+|||+|+||
T Consensus        72 l~~~~~-~g~~~~~~lG~~~~~ge~~q~vVp~g~W~aa~~~--------------------g~~sLvsctVaPGF~f~df  130 (140)
T d1znpa1          72 LHLSQD-GREVQTFTLGPAILEGERPQVIVPANCWQSAESL--------------------GDFTLVGCTVSPGFAFSSF  130 (140)
T ss_dssp             EEEESS-SSCCEEEEESSCTTTTEESEEEECTTCEEEEEES--------------------SSEEEEEEEESSCCCGGGE
T ss_pred             EEEecC-CCCEEEEEecCCcccCCceeEEECCCeEEeeeEC--------------------CCeEEEEeEecCCccCccC
Confidence            355665 9999999999999999999999999999999975                    3699999999999999999


Q ss_pred             cccChh
Q 037731           81 ELAKRS   86 (106)
Q Consensus        81 e~~~~~   86 (106)
                      ||++++
T Consensus       131 el~~~~  136 (140)
T d1znpa1         131 VMAEPG  136 (140)
T ss_dssp             EECCTT
T ss_pred             EeCCCC
Confidence            999986