Citrus Sinensis ID: 037798

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------
MDAPPPSSRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVNDDPPVNANQGEDDDEEEDDDDDDEEQDQSDSEAETGRNSRQGAADQIPEAVVPPVPEPSELMQLDMSEDIRLGSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAESSRTWPMALQEPVMIGSSLQLPPSGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGAKPKSVDSPPPPVATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQYVN
cccccccHHHHHHHHHHHcccccEEEEEEEEEccccEEEEcccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHEEEEcEEEcccccccccEEEEcccEEEEEcccccccccHHHHccccEEEEEEEcccEEEEcccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccEEEEEEEccccccHHHHHHHHHHccccEEEEEEEcccccEEEEEEEEEEccccccccccHHHHHHHHHHHHHHccc
cccccccHHHHHHHHHHHHcccEEEEEEEEEcccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHccccEEEEHHHEHEEcccccccccHHHccccEEEEEccccccccHcHHHHHHEEEEEEEccccEEEEcccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccEEccccccccccccccccccHHHHHHHHHHcccHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEccccccHHHHHHHHHHHcccEEEEEEEEccccEEEEEEEEEEcccccccccHHHHHHHHHHHHHccccc
mdapppssrlQSILQEAVQSVQWTYSLFWQIcpqqgiliwgdgyyngaiktrktvqpmevSAEEASLQRSQQLRELYESLsagetnqptrrpsaalspedltesEWFYLMCVSfsfpsgvglpgkayaRQQHVWLtganevdskTFSRAILAKTVVCIPFLdgvvelgttekvpedLALVQHVKSLFiddhqghlhppkpalsehstsnpdtsschlrfhsqsmspmcaavnddppvnanqgedddeeeddddddeeqdqsdseaetgrnsrqgaadqipeavvppvpepselmqldmsedirlgspddgsnnldsdFHLLAVsqgvnpaddqqqrgdshraessrtwpmalqepvmigsslqlppsgqippeeeltpedthySQTISTILqkqptrwaessyvtysstqsafakwtdrsdhllavpvpvegtsQWVLKYVLFTVpylhskyrdenspklgdvggdpasrfrkgtgtpqdemsaNHVLAERRRREKLNERFIILRSLVpfvtkmdkasilGDTIEYVKQLRKKIQDLESRNinnqilegdqrsrsadgskdqrvldrnarvgsgkrklrkvegsgggakpksvdsppppvatsVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQYVN
mdapppssRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESlsagetnqptrrpsaalspEDLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVNDDPPVNANQGEDDDEEEDDDDDDEEQdqsdseaetgrnsrqgaadqipeavvPPVPEPSELMQLDMSEDIRLGSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAESSRTWPMALQEPVMIGSSLQLPPSGQIPPEEELTPEDTHYSQTISTIlqkqptrwAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLhskyrdenspklgdvggdpasrfrkgtgtpqdemsanhvlAERRRREKLNERfiilrslvpfvtkmdkasilgdTIEYVKQLRKKIQdlesrninnqilegdqrsrsadgskdqrvldrnarvgsgkrklrkvegsgggakpksvdsppppVATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTaqlrakvkdnvngkkasivevkrainqiipqyvn
MDAPPPSSRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVNDDPPVNANQGedddeeeddddddeeqdqsdseAETGRNSRQGAADQIpeavvppvpepseLMQLDMSEDIRLGSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAESSRTWPMALQEPVMIGSSLQLPPSGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGakpksvdsppppvaTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQYVN
************ILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTR***************************************************SEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDD******************************************************************************************************************************************************************************************************TILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKY********************************************LNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI*********************************************************************VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIP****
**********QSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAI***************************Y******************LSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGH*****************************************************************************************************************************************************************************************************************************************************************************************************************RFIILRSLVPFVTKMDKASILGDTIEYVKQLRK*************************************************************************VSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDN**G*KASIVEVKRAINQIIPQYV*
***********SILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTV***************QQLRELYESLS******************DLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHLHPPK***************CHLRFHSQSMSPMCAAVNDDPPVNA**************************************QIPEAVVPPVPEPSELMQLDMSEDIRLGSPDDGSNNLDSDFHLLAVSQGVN******************TWPMALQEPVMIGSSLQLPPSGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEG**************VLDRNA*******************************ATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQYVN
*****PSSRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAI****************SLQRSQQLRELYESLSA***********AALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQ*****************************************************************************************************************S**D*******DFHL**********************************************************EDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAF*KWT**************GTSQWVLKYVLFTVPYLH*****************************************RRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDL*S************************************************************VATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIP****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDAPPPSSRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVNDDPPVNANQGEDDDEEEDDDDDDEEQDQSDSEAETGRNSRQGAADQIPEAVVPPVPEPSELMQLDMSEDIRLGSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAESSRTWPMALQEPVMIGSSLQLPPSGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASIxxxxxxxxxxxxxxxxxxxxxxxxxxxxEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGAKPKSVDSPPPPVATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQYVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query687 2.2.26 [Sep-21-2011]
Q9FT81518 Transcription factor TT8 yes no 0.282 0.374 0.709 2e-80
Q9FN69637 Transcription factor GLAB no no 0.845 0.912 0.319 3e-76
Q9CAD0596 Transcription factor EGL1 no no 0.278 0.320 0.502 2e-50
P13526610 Anthocyanin regulatory Lc N/A no 0.259 0.291 0.451 3e-44
P13027612 Anthocyanin regulatory R- N/A no 0.259 0.290 0.451 4e-44
Q8W2F1526 Transcription factor MYC1 no no 0.267 0.349 0.379 8e-34
Q39204623 Transcription factor MYC2 no no 0.272 0.300 0.325 6e-23
O49687589 Transcription factor MYC4 no no 0.256 0.298 0.305 2e-20
Q9FIP9592 Transcription factor ATR2 no no 0.238 0.277 0.329 3e-20
Q9LNJ5590 Transcription factor bHLH no no 0.250 0.291 0.333 1e-18
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2 Back     alignment and function desciption
 Score =  300 bits (768), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/203 (70%), Positives = 165/203 (81%), Gaps = 9/203 (4%)

Query: 10  LQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQR 69
           LQ +L+ AVQSV WTYS+FWQ CPQQ +L+WG+GYYNGAIKTRKT QP EV+AEEA+L+R
Sbjct: 20  LQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALER 79

Query: 70  SQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYAR 129
           SQQLRELYE+L AGE+     R   ALSPEDLTE+EWFYLMCVSFSFP   G+PGKAYAR
Sbjct: 80  SQQLRELYETLLAGESTSEA-RACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYAR 138

Query: 130 QQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDLALVQHVK 184
           ++HVWL+GANEVDSKTFSRAILAK     TVVCIP LDGVVELGTT+KV ED+  V+  K
Sbjct: 139 RKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTK 198

Query: 185 SLFIDDHQGHLHPPKPALSEHST 207
           S F D  + +   PKPALSEHST
Sbjct: 199 SFFYDHCKTN---PKPALSEHST 218
Transcription activator, when associated with MYB75/PAP1 or MYB90/PAP2. Involved in the control of flavonoid pigmentation. Plays a key role in regulating leucoanthocyanidin reductase (BANYULS) and dihydroflavonol-4-reductase (DFR). Not required for leucoanthocyanidin dioxygenase (LDOX) expression.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1 SV=1 Back     alignment and function description
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1 SV=1 Back     alignment and function description
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1 Back     alignment and function description
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1 Back     alignment and function description
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1 SV=1 Back     alignment and function description
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2 Back     alignment and function description
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1 Back     alignment and function description
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query687
225436998696 PREDICTED: transcription factor TT8 [Vit 0.973 0.961 0.698 0.0
184161316701 bHLH-like DNA binding protein [Vitis vin 0.973 0.954 0.692 0.0
401782370702 bHLH transcriptional factor AN1 homolog 0.954 0.934 0.678 0.0
338192055709 bHLH transcription factor [Malus x domes 0.967 0.937 0.660 0.0
302398605709 BHLH domain class transcription factor [ 0.967 0.937 0.659 0.0
147772652668 hypothetical protein VITISV_010152 [Viti 0.935 0.962 0.662 0.0
389827986697 transcription factor bHLH3 [Fragaria x a 0.951 0.938 0.650 0.0
355320016695 basic helix-loop-helix transcription fac 0.947 0.936 0.673 0.0
329750801719 bHLH transcription factor MYC1 [Diospyro 0.965 0.922 0.640 0.0
296086734620 unnamed protein product [Vitis vinifera] 0.871 0.966 0.660 0.0
>gi|225436998|ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/707 (69%), Positives = 560/707 (79%), Gaps = 38/707 (5%)

Query: 3   APPPSSRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSA 62
           A PP+SRLQS+LQ AVQSV+WTYSLFWQICPQQGIL+WGDGYYNGAIKTRKTVQPMEVSA
Sbjct: 2   AAPPNSRLQSMLQSAVQSVRWTYSLFWQICPQQGILVWGDGYYNGAIKTRKTVQPMEVSA 61

Query: 63  EEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGL 122
           EEASLQRSQQLRELYESLSAGETNQP RRP AALSPEDLTESEWFYLMCVSFSFP GVGL
Sbjct: 62  EEASLQRSQQLRELYESLSAGETNQPARRPCAALSPEDLTESEWFYLMCVSFSFPPGVGL 121

Query: 123 PGKAYARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDL 177
           PGKAYA++ H+WL GANEVDSK FSRAILAK     TVVCIP +DGVVE GTTEKV EDL
Sbjct: 122 PGKAYAKRHHIWLAGANEVDSKVFSRAILAKSARVQTVVCIPLMDGVVEFGTTEKVQEDL 181

Query: 178 ALVQHVKSLFIDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVNDDPPV 237
             VQHVKS F  DHQ H HPPKPALSEHSTSNP TSS H RFHS  +    AA +     
Sbjct: 182 GFVQHVKSFFT-DHQLHNHPPKPALSEHSTSNPATSSDHSRFHSPPIQAAYAAADPPASN 240

Query: 238 NANQGEDDDEEEDDDDDDEEQDQSDSEAETGRNSRQGAADQIPEAVVP---PVPEPSELM 294
           N  + E+++EEE++++++EE+ +SDSEAETGRN+R+          V       EPSEL+
Sbjct: 241 NQEEEEEEEEEEEEEEEEEEEAESDSEAETGRNNRRVRTQNTGTEGVAGSHTAAEPSELI 300

Query: 295 QLDMSEDIRLGSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAESSRTWPMALQE 354
           QL+MSE IRLGSPDDGSNNLDSDFH+LAVSQ    + D Q+R DS+RAES+R WPM LQ+
Sbjct: 301 QLEMSEGIRLGSPDDGSNNLDSDFHMLAVSQP-GSSVDHQRRADSYRAESARRWPM-LQD 358

Query: 355 PVMIGSSLQLPPSGQIPPE---EELTPEDTHYSQTISTILQKQPTRWAESS---YVTYSS 408
           P +  S LQ PP          +EL+ EDTHYSQT+STILQ QP RW+ESS    +   S
Sbjct: 359 P-LCSSGLQQPPPQPPTGPPPLDELSHEDTHYSQTVSTILQHQPNRWSESSSSGCIAPYS 417

Query: 409 TQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPA 468
           +QSAFAKWT R DH    P+ VEGTSQW+LKY+LF+VP+LH+KYRDENSPK  D  GD A
Sbjct: 418 SQSAFAKWTTRCDHHHH-PMAVEGTSQWLLKYILFSVPFLHTKYRDENSPKSRD--GDSA 474

Query: 469 SRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVK 528
            RFRK  GTPQDE+SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVK
Sbjct: 475 GRFRK--GTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVK 532

Query: 529 QLRKKIQDLESRNINNQILEGDQRSRSADG--SKDQRV----LDRNARV--GSGKRKLRK 580
           QLRKKIQDLE+R    + +E +QRSR +D   SK+ R+    +DRN  V  GS KRKLR 
Sbjct: 533 QLRKKIQDLEAR---TRQMEVEQRSRGSDSVRSKEHRIGSGGVDRNRAVVAGSDKRKLRI 589

Query: 581 VEGSGGGAKPKSVDSPPPPV---ATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELL 637
           VEGS  GAKPK VDSPP  V    T+V+VSIIESDAL+E+QC  +EGLLLD+MQMLR+L 
Sbjct: 590 VEGS-TGAKPKVVDSPPAAVEGGTTTVEVSIIESDALLEMQCPYREGLLLDVMQMLRDLR 648

Query: 638 IEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQ 684
           +E T VQS LTNGVF A+LRAKVK+N +GKKASI+EVKRAINQIIPQ
Sbjct: 649 LETTTVQSSLTNGVFVAELRAKVKENASGKKASIMEVKRAINQIIPQ 695

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|184161316|gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|401782370|dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar] Back     alignment and taxonomy information
>gi|338192055|gb|AEI84807.1| bHLH transcription factor [Malus x domestica] Back     alignment and taxonomy information
>gi|302398605|gb|ADL36597.1| BHLH domain class transcription factor [Malus x domestica] Back     alignment and taxonomy information
>gi|147772652|emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera] Back     alignment and taxonomy information
>gi|389827986|gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa] Back     alignment and taxonomy information
>gi|355320016|emb|CBY88797.1| basic helix-loop-helix transcription factor [Humulus lupulus] Back     alignment and taxonomy information
>gi|329750801|gb|AEC03343.1| bHLH transcription factor MYC1 [Diospyros kaki] Back     alignment and taxonomy information
>gi|296086734|emb|CBI32369.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query687
TAIR|locus:2118524518 TT8 "AT4G09820" [Arabidopsis t 0.282 0.374 0.709 1.7e-120
UNIPROTKB|Q7XPS7567 OSJNBa0065O17.4 "OSJNBa0065O17 0.240 0.291 0.523 1.6e-76
TAIR|locus:2026629596 EGL3 "AT1G63650" [Arabidopsis 0.262 0.302 0.526 3.2e-75
TAIR|locus:504954829637 GL3 "AT5G41315" [Arabidopsis t 0.289 0.312 0.483 3.7e-74
UNIPROTKB|Q948Y2451 Plw-OSB2 "R-type basic helix-l 0.301 0.458 0.439 7.7e-64
TAIR|locus:2127023580 ATMYC1 [Arabidopsis thaliana ( 0.266 0.315 0.403 3.2e-44
TAIR|locus:2178555592 MYC3 "AT5G46760" [Arabidopsis 0.244 0.283 0.343 7.6e-37
TAIR|locus:2141055589 MYC4 "AT4G17880" [Arabidopsis 0.247 0.288 0.319 3.5e-36
TAIR|locus:2035609623 MYC2 "AT1G32640" [Arabidopsis 0.259 0.285 0.341 4.8e-36
UNIPROTKB|Q336P5699 Os10g0575000 "Os10g0575000 pro 0.267 0.263 0.33 3.2e-34
TAIR|locus:2118524 TT8 "AT4G09820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 728 (261.3 bits), Expect = 1.7e-120, Sum P(4) = 1.7e-120
 Identities = 144/203 (70%), Positives = 165/203 (81%)

Query:    10 LQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQR 69
             LQ +L+ AVQSV WTYS+FWQ CPQQ +L+WG+GYYNGAIKTRKT QP EV+AEEA+L+R
Sbjct:    20 LQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALER 79

Query:    70 SQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYAR 129
             SQQLRELYE+L AGE+    R    ALSPEDLTE+EWFYLMCVSFSFP   G+PGKAYAR
Sbjct:    80 SQQLRELYETLLAGESTSEARA-CTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYAR 138

Query:   130 QQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDLALVQHVK 184
             ++HVWL+GANEVDSKTFSRAILAK     TVVCIP LDGVVELGTT+KV ED+  V+  K
Sbjct:   139 RKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTK 198

Query:   185 SLFIDDHQGHLHPPKPALSEHST 207
             S F D  + +   PKPALSEHST
Sbjct:   199 SFFYDHCKTN---PKPALSEHST 218
GO:0003677 "DNA binding" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0009962 "regulation of flavonoid biosynthetic process" evidence=TAS
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0005515 "protein binding" evidence=IPI
GO:2000029 "regulation of proanthocyanidin biosynthetic process" evidence=IEP
GO:0010026 "trichome differentiation" evidence=IMP
GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0010224 "response to UV-B" evidence=RCA
UNIPROTKB|Q7XPS7 OSJNBa0065O17.4 "OSJNBa0065O17.4 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2026629 EGL3 "AT1G63650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504954829 GL3 "AT5G41315" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q948Y2 Plw-OSB2 "R-type basic helix-loop-helix protein" [Oryza sativa (taxid:4530)] Back     alignment and assigned GO terms
TAIR|locus:2127023 ATMYC1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178555 MYC3 "AT5G46760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141055 MYC4 "AT4G17880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035609 MYC2 "AT1G32640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q336P5 Os10g0575000 "Os10g0575000 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query687
pfam14215171 pfam14215, bHLH-MYC_N, bHLH-MYC and R2R3-MYB trans 7e-82
cd0008360 cd00083, HLH, Helix-loop-helix domain, found in sp 3e-15
smart0035353 smart00353, HLH, helix loop helix domain 2e-14
pfam0001052 pfam00010, HLH, Helix-loop-helix DNA-binding domai 4e-13
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 0.001
>gnl|CDD|222598 pfam14215, bHLH-MYC_N, bHLH-MYC and R2R3-MYB transcription factors N-terminal Back     alignment and domain information 
 Score =  256 bits (656), Expect = 7e-82
 Identities = 111/184 (60%), Positives = 133/184 (72%), Gaps = 19/184 (10%)

Query: 10  LQSILQEAVQSVQWTYSLFWQICPQQ-GILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQ 68
           LQ  LQ  V+S QW+Y++FWQ+ P Q G+L WGDGYYNG IKTRKTV      AEE  LQ
Sbjct: 1   LQQRLQALVESEQWSYAIFWQLSPDQSGVLGWGDGYYNGEIKTRKTV------AEELGLQ 54

Query: 69  RSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYA 128
           R + LRELY  LS         R +AALSPEDLT++EWFYL+ ++FSFP G GLPGKA+A
Sbjct: 55  RKKVLRELYSLLS-------GSRDAAALSPEDLTDTEWFYLVSMTFSFPPGEGLPGKAFA 107

Query: 129 RQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDLALVQHV 183
              H+WL+GANE+DS   SR+ LA+     T+VCIP   GVVELG+TEK+PEDL LVQHV
Sbjct: 108 SGSHIWLSGANELDSSNCSRSWLAQSAGIQTIVCIPVPGGVVELGSTEKIPEDLNLVQHV 167

Query: 184 KSLF 187
           KSLF
Sbjct: 168 KSLF 171

This is the N-terminal region of a family of MYB and MYC transcription factors. The DNA-binding HLH domain is further downstream, pfam00010. Members of the MYB and MYC family regulate the biosynthesis of phenylpropanoids in several plant species (DOI:10.1007/s11295-009-0232-y). Length = 171
>gnl|CDD|238036 cd00083, HLH, Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long Back     alignment and domain information
>gnl|CDD|197674 smart00353, HLH, helix loop helix domain Back     alignment and domain information
>gnl|CDD|215654 pfam00010, HLH, Helix-loop-helix DNA-binding domain Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 687
PF14215163 bHLH-MYC_N: bHLH-MYC and R2R3-MYB transcription fa 100.0
cd0008360 HLH Helix-loop-helix domain, found in specific DNA 99.16
smart0035353 HLH helix loop helix domain. 99.13
PF0001055 HLH: Helix-loop-helix DNA-binding domain only nucl 99.11
KOG1318411 consensus Helix loop helix transcription factor EB 98.44
KOG1319229 consensus bHLHZip transcription factor BIGMAX [Tra 98.12
cd0489775 ACT_ACR_3 ACT domain-containing protein which is c 97.92
cd0489572 ACT_ACR_1 ACT domain-containing protein which is c 97.88
cd0492776 ACT_ACR-like_2 Second ACT domain, of a novel type 97.79
KOG4304250 consensus Transcriptional repressors of the hairy/ 97.74
KOG3561 803 consensus Aryl-hydrocarbon receptor nuclear transl 97.65
cd0489675 ACT_ACR-like_3 ACT domain-containing protein which 97.6
cd0490073 ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, 97.51
KOG2483232 consensus Upstream transcription factor 2/L-myc-2 97.48
KOG0561 373 consensus bHLH transcription factor [Transcription 97.39
cd0492574 ACT_ACR_2 ACT domain-containing protein which is c 97.34
KOG2588 953 consensus Predicted DNA-binding protein [Transcrip 97.3
cd0489970 ACT_ACR-UUR-like_2 C-terminal ACT domains of the b 97.24
KOG3960284 consensus Myogenic helix-loop-helix transcription 96.83
cd0492672 ACT_ACR_4 C-terminal ACT domain, of a novel type o 96.83
PF0184266 ACT: ACT domain; InterPro: IPR002912 The ACT domai 96.78
KOG4029228 consensus Transcription factor HAND2/Transcription 96.63
PF1374076 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A. 96.54
PF1329180 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A. 96.48
PLN0321793 transcription factor ATBS1; Provisional 96.35
cd0487370 ACT_UUR-ACR-like ACT domains of the bacterial sign 96.3
PRK0019490 hypothetical protein; Validated 96.17
cd0492868 ACT_TyrKc Uncharacterized, N-terminal ACT domain o 96.16
PRK05007884 PII uridylyl-transferase; Provisional 96.03
cd0487288 ACT_1ZPV ACT domain proteins similar to the yet un 95.99
cd0489377 ACT_GcvR_1 ACT domains that comprise the Glycine C 95.95
cd0486981 ACT_GcvR_2 ACT domains that comprise the Glycine C 95.79
cd0487574 ACT_F4HF-DF N-terminal ACT domain of formyltetrahy 95.66
PRK01759854 glnD PII uridylyl-transferase; Provisional 95.36
PRK00275895 glnD PII uridylyl-transferase; Provisional 95.24
cd0487075 ACT_PSP_1 CT domains found N-terminal of phosphose 95.19
cd0488876 ACT_PheB-BS C-terminal ACT domain of a small (~147 95.14
cd0488774 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-te 94.67
cd0488673 ACT_ThrD-II-like C-terminal ACT domain of biodegra 94.43
PRK04374869 PII uridylyl-transferase; Provisional 94.37
TIGR01693850 UTase_glnD [Protein-PII] uridylyltransferase. This 94.26
PRK04435147 hypothetical protein; Provisional 94.13
PRK03381 774 PII uridylyl-transferase; Provisional 94.11
PRK05092931 PII uridylyl-transferase; Provisional 94.07
PRK03381774 PII uridylyl-transferase; Provisional 93.81
cd0487774 ACT_TyrR N-terminal ACT domain of the TyrR protein 93.65
TIGR01693 850 UTase_glnD [Protein-PII] uridylyltransferase. This 93.51
PRK03059856 PII uridylyl-transferase; Provisional 93.46
PRK01759 854 glnD PII uridylyl-transferase; Provisional 93.12
PRK05007 884 PII uridylyl-transferase; Provisional 92.78
cd0487671 ACT_RelA-SpoT ACT domain found C-terminal of the R 92.21
COG2844867 GlnD UTP:GlnB (protein PII) uridylyltransferase [P 91.53
PRK00275 895 glnD PII uridylyl-transferase; Provisional 91.03
cd0487971 ACT_3PGDH-like ACT_3PGDH-like CD includes the C-te 90.91
PRK06027 286 purU formyltetrahydrofolate deformylase; Reviewed 90.88
cd0488179 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-termin 90.8
cd0490580 ACT_CM-PDT C-terminal ACT domain of the bifunction 90.8
cd0487472 ACT_Af1403 N-terminal ACT domain of the yet unchar 90.61
PRK08577136 hypothetical protein; Provisional 90.53
PRK03059 856 PII uridylyl-transferase; Provisional 90.2
cd0487872 ACT_AHAS N-terminal ACT domain of the Escherichia 89.93
TIGR00655 280 PurU formyltetrahydrofolate deformylase. This mode 89.69
KOG3910632 consensus Helix loop helix transcription factor [T 89.44
cd0488075 ACT_AAAH-PDT-like ACT domain of the nonheme iron-d 89.34
cd0211660 ACT ACT domains are commonly involved in specifica 89.34
PRK07334403 threonine dehydratase; Provisional 89.21
PRK05092 931 PII uridylyl-transferase; Provisional 88.5
PRK13011 286 formyltetrahydrofolate deformylase; Reviewed 87.89
PF13185148 GAF_2: GAF domain; PDB: 2QYB_A 3KSG_B 3KSF_C 3KSI_ 87.78
cd0489469 ACT_ACR-like_1 ACT domain-containing protein which 87.22
cd0490371 ACT_LSD C-terminal ACT domain of the L-serine dehy 87.19
cd0490866 ACT_Bt0572_1 N-terminal ACT domain of a novel prot 86.63
KOG4447173 consensus Transcription factor TWIST [Transcriptio 86.53
KOG3558 768 consensus Hypoxia-inducible factor 1/Neuronal PAS 86.52
PRK04374 869 PII uridylyl-transferase; Provisional 86.13
KOG3559 598 consensus Transcriptional regulator SIM1 [Transcri 84.99
cd0488372 ACT_AcuB C-terminal ACT domain of the Bacillus sub 84.6
KOG3560 712 consensus Aryl-hydrocarbon receptor [Transcription 84.52
PRK11061 748 fused phosphoenolpyruvate-protein phosphotransfera 84.03
cd0490474 ACT_AAAH ACT domain of the nonheme iron-dependent, 83.41
COG4492150 PheB ACT domain-containing protein [General functi 83.06
PRK13010 289 purU formyltetrahydrofolate deformylase; Reviewed 82.74
cd0488472 ACT_CBS C-terminal ACT domain of the cystathionine 81.61
cd0490969 ACT_PDH-BS C-terminal ACT domain of the monofuncti 81.41
>PF14215 bHLH-MYC_N: bHLH-MYC and R2R3-MYB transcription factors N-terminal Back     alignment and domain information 
Probab=100.00  E-value=1.2e-50  Score=393.85  Aligned_cols=158  Identities=58%  Similarity=1.022  Sum_probs=147.8

Q ss_pred             HHHHHHHhhccCCceEEEEeeecCCCceEEecceeecCCcccccccCCCccChHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 037798           10 LQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNQPT   89 (687)
Q Consensus        10 Lq~~L~~lv~~~~WtYAiFWq~s~~~~vL~WgDGyy~g~~~~~k~~~~~~~~~~~~~~~r~~~lreL~~sl~~g~~~~~~   89 (687)
                      ||++||+||++.+|+||||||+++++.+|+||||||+|++++++..       ++.+++|+++||+||.++.        
T Consensus         1 Lq~~Lr~lv~~~~W~YaVFWk~~~~~~~L~W~DG~~~g~~~~~~~~-------~~~~~~~~~~l~~l~~~~~--------   65 (163)
T PF14215_consen    1 LQQRLRSLVENSQWTYAVFWKLSPDNSVLVWGDGYCNGPKETRKNG-------EEEQEQRSKVLRELHSSFS--------   65 (163)
T ss_pred             ChHHHHHHhCCCCCcEEEEeEEcCCCCeeeEcceeecCCcccccch-------hhccchhhhHHHHHhhhcc--------
Confidence            7999999999999999999999998899999999999998877643       2567999999999996554        


Q ss_pred             CCCCccCCCCCCCccceeeeeeeeeecCCCCCccceecccCCeeEeeCCCCCCCCccccccCCC-----eEEEEeeCCcE
Q 037798           90 RRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGV  164 (687)
Q Consensus        90 ~~~~~als~edltd~Ewfyl~sm~~sF~~G~GlpG~a~~~g~~~Wl~~~~~~~~~~f~R~~lAk-----TvvciP~~~GV  164 (687)
                         ..++.+++|+|+||||++||+|+|  |+|+|||||++|+|+||++++.++++.|+|+++||     ||||||+.+||
T Consensus        66 ---~~~~~~~~v~~~e~f~~~s~~~sf--g~G~~G~a~~sg~~~Wi~~~~~~~~~~~~r~~~aq~~~~~Tiv~IPv~~GV  140 (163)
T PF14215_consen   66 ---SYALSPEEVTDTEWFYLVSMSYSF--GEGIPGRAAASGQHIWISGANELDSSYCERAWLAQFAGIQTIVCIPVPNGV  140 (163)
T ss_pred             ---ccccccchhHHHHHHhhceeeEEe--cCCccEEEeecCccEEEeCCCccccccchhhhhhcccccceEEEEEecCCE
Confidence               246789999999999999999999  99999999999999999999999999999999998     99999999999


Q ss_pred             EEecccccccCCHHHHHHHHHHh
Q 037798          165 VELGTTEKVPEDLALVQHVKSLF  187 (687)
Q Consensus       165 vELGSte~V~Ed~~lv~~ik~~F  187 (687)
                      ||||||++|+||++||++||++|
T Consensus       141 vELGSt~~I~Ed~~~v~~vk~~F  163 (163)
T PF14215_consen  141 VELGSTEKIPEDSNLVQRVKSLF  163 (163)
T ss_pred             EEeeeeeeeccCHHHHHHHHhhC
Confidence            99999999999999999999998

>cd00083 HLH Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long Back     alignment and domain information
>smart00353 HLH helix loop helix domain Back     alignment and domain information
>PF00010 HLH: Helix-loop-helix DNA-binding domain only nuclear translocator protein (Arnt) Back     alignment and domain information
>KOG1318 consensus Helix loop helix transcription factor EB [Transcription] Back     alignment and domain information
>KOG1319 consensus bHLHZip transcription factor BIGMAX [Transcription] Back     alignment and domain information
>cd04897 ACT_ACR_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04927 ACT_ACR-like_2 Second ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>KOG4304 consensus Transcriptional repressors of the hairy/E(spl) family (contains HLH) [Transcription] Back     alignment and domain information
>KOG3561 consensus Aryl-hydrocarbon receptor nuclear translocator [Transcription] Back     alignment and domain information
>cd04896 ACT_ACR-like_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04900 ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, includes the first of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains Back     alignment and domain information
>KOG2483 consensus Upstream transcription factor 2/L-myc-2 protein [Transcription] Back     alignment and domain information
>KOG0561 consensus bHLH transcription factor [Transcription] Back     alignment and domain information
>cd04925 ACT_ACR_2 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>KOG2588 consensus Predicted DNA-binding protein [Transcription] Back     alignment and domain information
>cd04899 ACT_ACR-UUR-like_2 C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains Back     alignment and domain information
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription] Back     alignment and domain information
>cd04926 ACT_ACR_4 C-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>PF01842 ACT: ACT domain; InterPro: IPR002912 The ACT domain is found in a variety of contexts and is proposed to be a conserved regulatory binding fold Back     alignment and domain information
>KOG4029 consensus Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1 [Transcription] Back     alignment and domain information
>PF13740 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A Back     alignment and domain information
>PF13291 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A Back     alignment and domain information
>PLN03217 transcription factor ATBS1; Provisional Back     alignment and domain information
>cd04873 ACT_UUR-ACR-like ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD Back     alignment and domain information
>PRK00194 hypothetical protein; Validated Back     alignment and domain information
>cd04928 ACT_TyrKc Uncharacterized, N-terminal ACT domain of an Arabidopsis/Oryza predicted tyrosine kinase and other related ACT domains Back     alignment and domain information
>PRK05007 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04872 ACT_1ZPV ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein Back     alignment and domain information
>cd04893 ACT_GcvR_1 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains Back     alignment and domain information
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains Back     alignment and domain information
>cd04875 ACT_F4HF-DF N-terminal ACT domain of formyltetrahydrofolate deformylase (F4HF-DF; formyltetrahydrofolate hydrolase) Back     alignment and domain information
>PRK01759 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK00275 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB) Back     alignment and domain information
>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a Back     alignment and domain information
>cd04887 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI and related domains Back     alignment and domain information
>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains Back     alignment and domain information
>PRK04374 PII uridylyl-transferase; Provisional Back     alignment and domain information
>TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase Back     alignment and domain information
>PRK04435 hypothetical protein; Provisional Back     alignment and domain information
>PRK03381 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK05092 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK03381 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04877 ACT_TyrR N-terminal ACT domain of the TyrR protein Back     alignment and domain information
>TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase Back     alignment and domain information
>PRK03059 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK01759 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK05007 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04876 ACT_RelA-SpoT ACT domain found C-terminal of the RelA/SpoT domains Back     alignment and domain information
>COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00275 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04879 ACT_3PGDH-like ACT_3PGDH-like CD includes the C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) Back     alignment and domain information
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed Back     alignment and domain information
>cd04881 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent, homoserine dehydrogenase (HSDH) and related domains Back     alignment and domain information
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme Back     alignment and domain information
>cd04874 ACT_Af1403 N-terminal ACT domain of the yet uncharacterized, small (~133 a Back     alignment and domain information
>PRK08577 hypothetical protein; Provisional Back     alignment and domain information
>PRK03059 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04878 ACT_AHAS N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS) Back     alignment and domain information
>TIGR00655 PurU formyltetrahydrofolate deformylase Back     alignment and domain information
>KOG3910 consensus Helix loop helix transcription factor [Transcription] Back     alignment and domain information
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information
>cd02116 ACT ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme Back     alignment and domain information
>PRK07334 threonine dehydratase; Provisional Back     alignment and domain information
>PRK05092 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK13011 formyltetrahydrofolate deformylase; Reviewed Back     alignment and domain information
>PF13185 GAF_2: GAF domain; PDB: 2QYB_A 3KSG_B 3KSF_C 3KSI_A 3KSH_A 3MMH_A 3RFB_B 1F5M_A 3KO6_B 3HCY_A Back     alignment and domain information
>cd04894 ACT_ACR-like_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04903 ACT_LSD C-terminal ACT domain of the L-serine dehydratase (LSD), iron-sulfur-dependent, beta subunit Back     alignment and domain information
>cd04908 ACT_Bt0572_1 N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains Back     alignment and domain information
>KOG4447 consensus Transcription factor TWIST [Transcription] Back     alignment and domain information
>KOG3558 consensus Hypoxia-inducible factor 1/Neuronal PAS domain protein NPAS1 [Signal transduction mechanisms; Transcription] Back     alignment and domain information
>PRK04374 PII uridylyl-transferase; Provisional Back     alignment and domain information
>KOG3559 consensus Transcriptional regulator SIM1 [Transcription] Back     alignment and domain information
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB Back     alignment and domain information
>KOG3560 consensus Aryl-hydrocarbon receptor [Transcription] Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information
>COG4492 PheB ACT domain-containing protein [General function prediction only] Back     alignment and domain information
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed Back     alignment and domain information
>cd04884 ACT_CBS C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria Back     alignment and domain information
>cd04909 ACT_PDH-BS C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query687
1am9_A82 Srebp-1A, protein (sterol regulatory element bindi 5e-20
1nkp_A88 C-MYC, MYC proto-oncogene protein; transcription, 2e-17
1hlo_A80 Protein (transcription factor MAX); transcriptiona 2e-16
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 1e-15
1an4_A65 Protein (upstream stimulatory factor); protein-DNA 8e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-13
1nlw_A80 MAD protein, MAX dimerizer; transcription factor, 8e-11
4f3l_A 361 Mclock, circadian locomoter output cycles protein 1e-06
4f3l_B 387 BMAL1B; BHLH, PAS, circadian rhythm proteins, tran 1e-06
1a0a_A63 BHLH, protein (phosphate system positive regulator 2e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 3e-04
3u5v_A76 Protein MAX, transcription factor E2-alpha chimer; 7e-04
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C Length = 82 Back     alignment and structure
 Score = 84.0 bits (208), Expect = 5e-20
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 478 PQDEMSANHVLAERRRREKLNERFIILRSLVPFV-TKMDKASILGDTIEYVKQLRKKIQD 536
            + E    H   E+R R  +N++ I L+ LV     K++K+++L   I+Y++ L+   Q 
Sbjct: 2   SRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQK 61

Query: 537 LESRN 541
           L+  N
Sbjct: 62  LKQEN 66
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 Length = 88 Back     alignment and structure
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Length = 80 Back     alignment and structure
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Length = 83 Back     alignment and structure
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1 Length = 65 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1 Length = 80 Back     alignment and structure
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Length = 361 Back     alignment and structure
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Length = 387 Back     alignment and structure
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1 Length = 63 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A* Length = 76 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query687
1am9_A82 Srebp-1A, protein (sterol regulatory element bindi 99.48
4h10_B71 Circadian locomoter output cycles protein kaput; B 99.36
1hlo_A80 Protein (transcription factor MAX); transcriptiona 99.35
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 99.34
4ati_A118 MITF, microphthalmia-associated transcription fact 99.31
1nkp_A88 C-MYC, MYC proto-oncogene protein; transcription, 99.31
1an4_A65 Protein (upstream stimulatory factor); protein-DNA 99.31
1a0a_A63 BHLH, protein (phosphate system positive regulator 99.29
4h10_A73 ARYL hydrocarbon receptor nuclear translocator-LI 99.25
1nlw_A80 MAD protein, MAX dimerizer; transcription factor, 99.22
3u5v_A76 Protein MAX, transcription factor E2-alpha chimer; 99.16
1mdy_A68 Protein (MYOD BHLH domain); protein-DNA complex, t 98.86
2ql2_B60 Neurod1, neurogenic differentiation factor 1; basi 98.81
4f3l_A 361 Mclock, circadian locomoter output cycles protein 98.59
4f3l_B 387 BMAL1B; BHLH, PAS, circadian rhythm proteins, tran 98.44
2lfh_A68 DNA-binding protein inhibitor ID-3; structural gen 98.2
4ath_A83 MITF, microphthalmia-associated transcription fact 98.07
4aya_A97 DNA-binding protein inhibitor ID-2; cell cycle; 2. 97.53
1zpv_A91 ACT domain protein; structural genomics, PSI, prot 96.97
3e0y_A181 Conserved domain protein; APC87688.2, geobacter su 95.14
1u8s_A 192 Glycine cleavage system transcriptional repressor, 95.14
3mmh_A167 FRMSR, methionine-R-sulfoxide reductase; oxidoredu 94.85
1vhm_A195 Protein YEBR; structural genomics, unknown functio 94.82
2ko1_A88 CTR148A, GTP pyrophosphokinase; homodimer, alpha+b 94.63
3trc_A171 Phosphoenolpyruvate-protein phosphotransferase; si 94.58
2nyi_A 195 Unknown protein; protein structure initiative, PSI 94.51
2nyi_A195 Unknown protein; protein structure initiative, PSI 94.29
3dba_A180 CONE CGMP-specific 3',5'-cyclic phosphodiesterase 94.04
2e4s_A189 CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphod 93.91
3rfb_A171 Putative uncharacterized protein; FRMSR, GAF, oxid 93.9
3oov_A169 Methyl-accepting chemotaxis protein, putative; str 93.83
1f5m_A180 GAF; CGMP binding, signaling protein; 1.90A {Sacch 93.67
3ci6_A171 Phosphoenolpyruvate-protein phosphotransferase; PE 93.59
3ksh_A160 Putative uncharacterized protein; FRMSR, free-Met- 93.54
1u8s_A192 Glycine cleavage system transcriptional repressor, 93.18
2zmf_A189 CAMP and CAMP-inhibited CGMP 3',5'-cyclic phospho 92.01
3k2n_A177 Sigma-54-dependent transcriptional regulator; PSI- 90.81
3obi_A 288 Formyltetrahydrofolate deformylase; structural gen 89.61
3p96_A 415 Phosphoserine phosphatase SERB; ssgcid, structural 89.2
2vjw_A149 GAF-B, GAF family protein; histidine kinase, hypox 89.16
2jhe_A 190 Transcription regulator TYRR; aromatic hydrocarbon 88.51
3n0v_A 286 Formyltetrahydrofolate deformylase; formyl transfe 88.47
3o1l_A 302 Formyltetrahydrofolate deformylase; structural gen 88.46
1ykd_A398 Adenylate cyclase; GAF domain, bound cyclic AMP li 87.73
2w3g_A153 DOSS, two component sensor histidine kinase DEVS ( 86.16
3lou_A 292 Formyltetrahydrofolate deformylase; structural gen 84.74
3hcy_A151 Putative two-component sensor histidine kinase PR; 81.44
2pc6_A165 Probable acetolactate synthase isozyme III (small; 80.74
2qyb_A181 Membrane protein, putative; GAF domain, domain of 80.2
1y7p_A 223 Hypothetical protein AF1403; structural genomics, 80.14
3nrb_A 287 Formyltetrahydrofolate deformylase; N-terminal ACT 80.04
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C Back     alignment and structure
Probab=99.48  E-value=2.5e-14  Score=123.46  Aligned_cols=60  Identities=30%  Similarity=0.511  Sum_probs=57.5

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHhccCCCC-CCCCccchHHHHHHHHHHHHHHHHHHHhhh
Q 037798          482 MSANHVLAERRRREKLNERFIILRSLVPFV-TKMDKASILGDTIEYVKQLRKKIQDLESRN  541 (687)
Q Consensus       482 ~~~~H~~~ER~RR~kin~~f~~LrsLvP~~-~K~dKaSIL~~aI~YIk~Lq~~v~~Le~~~  541 (687)
                      .+.+|+.+||+||++||+.|..|++|||.. .|+||++||.+||+||++|+.+++.|+.++
T Consensus         6 rr~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~   66 (82)
T 1am9_A            6 KRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQEN   66 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367999999999999999999999999976 899999999999999999999999999988
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens} Back     alignment and structure
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Back     alignment and structure
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A Back     alignment and structure
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1 Back     alignment and structure
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens} Back     alignment and structure
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A* Back     alignment and structure
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B* Back     alignment and structure
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus} Back     alignment and structure
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Back     alignment and structure
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Back     alignment and structure
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Back     alignment and structure
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus} Back     alignment and structure
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens} Back     alignment and structure
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7 Back     alignment and structure
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens} Back     alignment and structure
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5 Back     alignment and structure
>3mmh_A FRMSR, methionine-R-sulfoxide reductase; oxidoreductase; HET: SME MRD; 1.25A {Neisseria meningitidis} SCOP: d.110.2.0 Back     alignment and structure
>1vhm_A Protein YEBR; structural genomics, unknown function; HET: MES; 2.10A {Escherichia coli} SCOP: d.110.2.1 Back     alignment and structure
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A Back     alignment and structure
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii} Back     alignment and structure
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria} Back     alignment and structure
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria} Back     alignment and structure
>3dba_A CONE CGMP-specific 3',5'-cyclic phosphodiesterase alpha'; 3', GAF domain, cyclic nucleotide phosphodiesterase hydrolase, lipoprotein, membrane; HET: 35G; 2.57A {Gallus gallus} Back     alignment and structure
>3rfb_A Putative uncharacterized protein; FRMSR, GAF, oxidoreductase, SME; HET: SME; 2.30A {Streptococcus pneumoniae} Back     alignment and structure
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens} Back     alignment and structure
>1f5m_A GAF; CGMP binding, signaling protein; 1.90A {Saccharomyces cerevisiae} SCOP: d.110.2.1 PDB: 3ko6_A* Back     alignment and structure
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP} Back     alignment and structure
>3ksh_A Putative uncharacterized protein; FRMSR, free-Met-R-SO, oxidoreductase; 1.50A {Staphylococcus aureus} SCOP: d.110.2.0 PDB: 3ksf_A 3ksi_A 3ksg_A* Back     alignment and structure
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5 Back     alignment and structure
>2zmf_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phospho 10A; GAF domain, phosphodiesterase, CGMP-binding, HYD nucleotide-binding, structural genomics; HET: MSE CMP; 2.10A {Homo sapiens} Back     alignment and structure
>3k2n_A Sigma-54-dependent transcriptional regulator; PSI-2, protein structure initiative, structural genomics; 2.50A {Chlorobium tepidum tls} Back     alignment and structure
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris} Back     alignment and structure
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Back     alignment and structure
>2vjw_A GAF-B, GAF family protein; histidine kinase, hypoxia sensing, hydrolase; HET: MSE; 2.0A {Mycobacterium smegmatis} PDB: 2vks_A Back     alignment and structure
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli} Back     alignment and structure
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida} Back     alignment and structure
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV} Back     alignment and structure
>1ykd_A Adenylate cyclase; GAF domain, bound cyclic AMP ligand, lyase; HET: CMP; 1.90A {Anabaena SP} Back     alignment and structure
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A* Back     alignment and structure
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei} Back     alignment and structure
>3hcy_A Putative two-component sensor histidine kinase PR; two-component sensor histidine kinase protein, structural GE PSI, MCSG; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6 Back     alignment and structure
>2qyb_A Membrane protein, putative; GAF domain, domain of putative membrane protein, PSI-2, MCSG structural genomics; 2.40A {Geobacter sulfurreducens pca} Back     alignment and structure
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12 Back     alignment and structure
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 687
d1nkpb_83 a.38.1.1 (B:) Max protein {Human (Homo sapiens) [T 2e-16
d1am9a_80 a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxI 3e-16
d1uklc_61 a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId 4e-16
d1nkpa_88 a.38.1.1 (A:) Myc proto-oncogene protein {Human (H 9e-16
d1nlwa_79 a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [T 5e-15
d1a0aa_63 a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Sa 6e-15
d1an4a_65 a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapien 7e-15
d1mdya_68 a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus muscul 4e-14
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Length = 83 Back     information, alignment and structure

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Max protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (177), Expect = 2e-16
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 484 ANHVLAERRRREKLNERFIILRSLVPFV--TKMDKASILGDTIEYVKQLRKKIQDLESRN 541
           A+H   ER+RR+ + + F  LR  VP +   K  +A IL    EY++ +R+K    +   
Sbjct: 4   AHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDI 63
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} Length = 80 Back     information, alignment and structure
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 61 Back     information, alignment and structure
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 63 Back     information, alignment and structure
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]} Length = 65 Back     information, alignment and structure
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 68 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query687
d1am9a_80 SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} 99.34
d1nlwa_79 Mad protein {Human (Homo sapiens) [TaxId: 9606]} 99.33
d1a0aa_63 Pho4 B/HLH domain {Baker's yeast (Saccharomyces ce 99.32
d1nkpb_83 Max protein {Human (Homo sapiens) [TaxId: 9606]} 99.29
d1nkpa_88 Myc proto-oncogene protein {Human (Homo sapiens) [ 99.26
d1mdya_68 Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10 99.26
d1an4a_65 Usf B/HLH domain {Human (Homo sapiens) [TaxId: 960 99.16
d1uklc_61 SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} 99.13
d1zpva183 UPF0237 protein SP0238 {Streptococcus pneumoniae [ 97.02
d1u8sa186 putative transcriptional repressor VC2159 {Vibrio 96.39
d1u8sa293 putative transcriptional repressor VC2159 {Vibrio 95.77
d1y7pa277 Hypothetical protein AF1403, N-terminal domain {Ar 94.19
d1f5ma_176 Hypothetical protein ykl069wp {Baker's yeast (Sacc 94.0
d1mc0a1187 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF 93.31
d1vhma_159 Hypothetical protein YebR {Escherichia coli [TaxId 93.12
d2f06a171 Hypothetical protein BT0572 {Bacteroides thetaiota 89.55
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-1a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.9e-13  Score=113.36  Aligned_cols=60  Identities=30%  Similarity=0.501  Sum_probs=56.7

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHhccCCC-CCCCCccchHHHHHHHHHHHHHHHHHHHhhh
Q 037798          482 MSANHVLAERRRREKLNERFIILRSLVPF-VTKMDKASILGDTIEYVKQLRKKIQDLESRN  541 (687)
Q Consensus       482 ~~~~H~~~ER~RR~kin~~f~~LrsLvP~-~~K~dKaSIL~~aI~YIk~Lq~~v~~Le~~~  541 (687)
                      .+.+|+.+||+||++||+.|..|++|||. ..|++|++||..||+||++|+.+++.|+.++
T Consensus         6 kR~~H~~~Er~RR~~in~~~~~L~~llP~~~~k~~K~~iL~~a~~yI~~L~~~~~~L~~e~   66 (80)
T d1am9a_           6 KRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQEN   66 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46799999999999999999999999996 5699999999999999999999999999887
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1f5ma_ d.110.2.1 (A:) Hypothetical protein ykl069wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mc0a1 d.110.2.1 (A:215-401) 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1vhma_ d.110.2.1 (A:) Hypothetical protein YebR {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure