Citrus Sinensis ID: 037827

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
Protein Sequence
MCSDEVTTAQEESDDGNNKTPNTKDEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLTLATNDVRLPHSKIQYLHQYL
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHccccccccccHHHHHHHHHcHHHHHHHHHHccHHHHHHHHHcccccHHcccccccccHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHcccHHHHHcccccHHHHHHHHccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHcccHHHHHHHHHHHcHHHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHEccccccccccccccHHHHHHHHccccEEEEccccccHHHHHcccccccccccHHHHHHEEEEEccccEEEcccccccHccccccccccccccccccHHHHHHHHHHHHHHHEEEEcccccEEccccccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
mcsdevttaqeesddgnnktpntkdeKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYeadlpnvrdeenllPIHRAAKQGQRNVVCYLLEktrapldgsddvAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYqwipvqeeynphahahsenvdgdlekqlsetshsaFGFELAYLLLHWFVSFrvsttpltlatndvrlphskiqyLHQYL
Flexible Loop (DISEMBL)
mcsdevttaqeesddgnnktpntkdekiikdIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIhraakqgqrNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLtlatndvrlphskIQYLHQYL
Low Complexity Region (SEG)
MCSDEVTTAQEESDDGNNKTPNTKDEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLTLATNDVRLPHSKIQYLHQYL
Disordered region (IsUnstruct)
***************************IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEY************************SAFGFELAYLLLHWFVSFRVSTTPLTLATNDVRLPHSKIQYL****
Disordered Region (DISOPRED)
******************************DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH************************GFELAYLLLHWFVSFRVSTTPLTLATNDVRLPHSKI***HQYL
Disordered Region (DISEMBL)
*********************NTKDEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLTLATNDVRLPHSKIQYLHQYL
Disordered Region (DISPRO)
******************KTPNTKDEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLTLATNDVRLPHSKIQYLHQYL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCSDEVTTAQEESDDGNNKTPNTKDEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLTLATNDVRLPHSKIQYLHQYL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
225464352	603	PREDICTED: uncharacterized protein LOC10	0.422	0.184	0.279	1e-06
147860696	891	hypothetical protein VITISV_011174 [Viti	0.532	0.157	0.269	2e-06
147826943	327	hypothetical protein VITISV_001418 [Viti	0.422	0.339	0.274	1e-05
225449663	757	PREDICTED: uncharacterized protein LOC10	0.433	0.150	0.272	2e-05
255544802	590	ankyrin repeat-containing protein, putat	0.494	0.220	0.287	3e-05
147843694	289	hypothetical protein VITISV_011483 [Viti	0.414	0.377	0.275	4e-05
359483665	762	PREDICTED: ankyrin repeat-containing pro	0.444	0.153	0.268	5e-05
255590066	395	ankyrin repeat-containing protein, putat	0.380	0.253	0.341	6e-05
147815434	302	hypothetical protein VITISV_001923 [Viti	0.494	0.430	0.258	6e-05
225464095	979	PREDICTED: uncharacterized protein LOC10	0.422	0.113	0.274	7e-05

>gi|225464352|ref|XP_002263244.1| PREDICTED: uncharacterized protein LOC100265216 [Vitis vinifera]

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 25/136 (18%)

Query: 75  FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT------- 127
           F  A  G ++ +  L+     LPN+   +N  P+H A + G + +  YLL  T       
Sbjct: 109 FNAARAGNIKAVKLLVNKNPSLPNICQRDNFAPLHSAVRYGHKELTLYLLSVTRDDEPPY 168

Query: 128 ------------RAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKI------LELLSKRPKA 169
                       RA + G  DVA  L+ ++P LA                L +L+KRP A
Sbjct: 169 PFSNSPGFELLRRALMVGFHDVALHLVERYPDLATCNFGDAKDSDDDKAPLTVLAKRPWA 228

Query: 170 FASGIRLGYWKGLLYQ 185
           F SG R   W+ ++Y 
Sbjct: 229 FRSGSRFNLWQLIIYH 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147860696|emb|CAN81449.1| hypothetical protein VITISV_011174 [Vitis vinifera]

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 16/156 (10%)

Query: 50  LEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH 109
           +E+ +    PN L     + ++ F F  A+ G + +   +++    LP +R  + ++P+H
Sbjct: 379 VEEVVGLMDPNDLELQNENSNTAFCF-AAAAGTVRIAEVMVKKNDHLPMIRGNQQMMPLH 437

Query: 110 RAAKQGQRNVVCYLLEKTR-APLDGSD--------------DVAYGLLRKHPKLAWAEIA 154
            AA  G   +V YL  KT    L   D              +VA  +L  HPKLA     
Sbjct: 438 MAALLGHSEMVWYLYNKTNHQDLKDEDWIGILNTCISTDLYEVALAILESHPKLATIRDG 497

Query: 155 GTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQ 190
                L LL+++P AF+   R+G W   +    P+Q
Sbjct: 498 NYETALHLLARKPSAFSGESRIGIWTTFINPRSPLQ 533

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147826943|emb|CAN68876.1| hypothetical protein VITISV_001418 [Vitis vinifera]

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 31/142 (21%)

Query: 75  FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT------- 127
           F  A  G ++    L+     LPN+    NL+P+H A K G + +  YLL  T       
Sbjct: 185 FTAAMAGNIKAAKLLVDKNPSLPNICSYGNLVPLHSALKYGHKELTSYLLSVTRDDVYPS 244

Query: 128 ------------RAPLDGSDDVAYGLLRKHPKLAWAEI------------AGTGKILELL 163
                       RA + G +DVA  L+ ++P LA                      L +L
Sbjct: 245 PFADKPGFELLRRALMVGFNDVALHLVERYPDLATCHFNYAHYDDDADDSDEALTPLTVL 304

Query: 164 SKRPKAFASGIRLGYWKGLLYQ 185
           +KRP AF SG R   W+ +++ 
Sbjct: 305 AKRPWAFRSGSRFNLWQFIIFH 326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449663|ref|XP_002263810.1| PREDICTED: uncharacterized protein LOC100260956 [Vitis vinifera]

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 11/125 (8%)

Query: 76  IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLL----EKTRAPL 131
           + AS G  E+  ++IR    L N+ D + +LP+  A  +G+R + C+L     ++  AP 
Sbjct: 256 LAASDGITEIAQSMIRKNRTLANISDGDKILPVVLACNRGKREMTCFLYFHTGQEELAPA 315

Query: 132 DGSDD-------VAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLY 184
           +G +        +A  +L K+P LA      +   L +L + P  F SG +L +W+  +Y
Sbjct: 316 NGKNGATLLSYYIALDILEKYPSLAVTLDMDSLIPLYVLGQTPSLFKSGSQLWFWQHWIY 375

Query: 185 QWIPV 189
             + +
Sbjct: 376 LCVTI 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544802|ref|XP_002513462.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223547370|gb|EEF48865.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 23/153 (15%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTR----APLDG 133
           A  G LE    L++    L   R+  N  P+H AA    +  V +LL  TR    +P   
Sbjct: 87  AMVGNLEAAKILVKKNPTLTQGRNVLNATPLHYAASYAHQETVRFLLPVTRDEYPSPFTD 146

Query: 134 SDDVA----------YGL----LRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYW 179
            D V           YGL    L+++P LA          L++L+++P+AF SG RLG+ 
Sbjct: 147 KDGVRLLNSLITADFYGLALHLLKRYPALARGTDQYGFTSLDMLARKPQAFPSGSRLGFR 206

Query: 180 KGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQL 212
              LY +           H       GD+E Q+
Sbjct: 207 HSFLYHYCAANSVDTETFHQ-----GGDVENQV 234

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843694|emb|CAN79870.1| hypothetical protein VITISV_011483 [Vitis vinifera]

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 29/138 (21%)

Query: 77  VASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSD- 135
            A  G ++    L+  +  LPN     NL P+H A + G + +  YLL  TR  +D S  
Sbjct: 151 AARAGNIKAAKLLVNKKPSLPNSCQRNNLAPLHSAVRYGHKELTLYLLGVTRDDVDPSPF 210

Query: 136 -----------------DVAYGLLRKHPKLAWAEIAGTG-----------KILELLSKRP 167
                            DVA  L++++P LA                     L +L+KRP
Sbjct: 211 SKSPGFKLLHRALMVFHDVALYLVKRYPHLATCHFGCACHDDAKDSNDDFAPLTVLAKRP 270

Query: 168 KAFASGIRLGYWKGLLYQ 185
            AF SG R   W+ ++Y 
Sbjct: 271 WAFRSGSRFNLWQLIIYH 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483665|ref|XP_003632996.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRA-PLDGSD- 135
           A +G  ++   ++     LP +R  E   P+H A   G R +V YL  KT +  L  S+ 
Sbjct: 282 AVSGVTKIAEVMVNKNNRLPLIRGSEGATPLHMATLLGHREMVWYLYNKTDSNRLTDSNR 341

Query: 136 -------------------DVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRL 176
                              DVA  +++KHPK+A A        L +L+++P A+ SG +L
Sbjct: 342 LTDEDHHGLLIAAITSDLFDVALKIVQKHPKIATARGRNGETALHILARKPSAYQSGSQL 401

Query: 177 GYWKGLLYQWIPVQEEYN 194
           G+ +  +Y +  ++  Y+
Sbjct: 402 GFLQRCIYAFPFIKVVYD 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255590066|ref|XP_002535165.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223523865|gb|EEF27218.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 17/117 (14%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTR-APLDGSD- 135
           A +G  E+   L+     LP VR  +   P++ A   G+R++V YL   T    L G D 
Sbjct: 252 AVSGITEIAKVLVNKNKTLPLVRGSQGATPLYMAVLLGRRDMVWYLYSVTDDKDLSGEDR 311

Query: 136 -------------DVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG--IRLG 177
                        DVA  L+R HP+LA A        L +LS++P AF SG  +RLG
Sbjct: 312 IGLLIAAITSNLFDVALELIRNHPELAIARDGNDETALHVLSRKPSAFYSGTQLRLG 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147815434|emb|CAN72589.1| hypothetical protein VITISV_001923 [Vitis vinifera]

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 21/151 (13%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTR----APLDG 133
           A +G  E+  T++   A   +V +E   +P+  A+   Q+ +V YL  +T     +P  G
Sbjct: 110 AISGITEMAETIVNKHAGAVSVGNEHGQIPVIVASFYDQKKMVRYLYGRTPIQELSPEKG 169

Query: 134 SD--------------DVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYW 179
           ++              D+A  LL+ H +L + +       + +L+++P AF SG +L +W
Sbjct: 170 TNGATLLNFLVSANIYDIALHLLKHHRQLGFIKDYYGKLTMRILAQKPSAFPSGSKLVFW 229

Query: 180 KGLLYQWI---PVQEEYNPHAHAHSENVDGD 207
           +  +Y  I   P  E+Y  H   H    D D
Sbjct: 230 ERWIYSLIHIKPFDEQYQEHEQPHQAPADED 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464095|ref|XP_002263643.1| PREDICTED: uncharacterized protein LOC100255160 [Vitis vinifera]

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 20/131 (15%)

Query: 76  IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVV----CYLLEKTRAPL 131
           + A  G  E+   +I+   +L ++ D E +LP+ RA  +G++ V+     Y   K   P 
Sbjct: 385 LAALNGFKEIARCMIKKNTELTSILDNEGILPVVRACNRGKKGVIRLLYNYTPPKELGPK 444

Query: 132 DGSD----------------DVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIR 175
            G                  D+A  +L KHP LA          L +L + P  F SG R
Sbjct: 445 KGEGKNGARLLGYCIATKFLDLALDILEKHPSLAVTLNEDGISPLYILGQMPSLFKSGTR 504

Query: 176 LGYWKGLLYQW 186
           L +W+G +Y +
Sbjct: 505 LWFWQGWIYSY 515

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
UNIPROTKB|F1NLF9	168	CDKN2C "Uncharacterized protei	0.190	0.297	0.431	0.00069
UNIPROTKB|P42773	168	CDKN2C "Cyclin-dependent kinas	0.186	0.291	0.42	0.00093

UNIPROTKB|F1NLF9 CDKN2C "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 104 (41.7 bits), Expect = 0.00069, P = 0.00069
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query:    77 VASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT 127
             VA  G L+ + TL+ + AD+ N+ D E  LP+H AA++G   VV +LL +T
Sbjct:    78 VARAGFLDTLQTLLEFHADV-NIEDAEGNLPLHLAAQEGHVRVVEFLLRRT 127

GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0004861 "cyclin-dependent protein serine/threonine kinase inhibitor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0030308 "negative regulation of cell growth" evidence=IEA

UNIPROTKB|P42773 CDKN2C "Cyclin-dependent kinase 4 inhibitor C" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 0.00093, P = 0.00093
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query:    78 ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT 127
             A  G L+ + TL+ ++AD+ N+ D E  LP+H AAK+G   VV +L++ T
Sbjct:    78 ARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      263       263   0.00091  114 3  11 22  0.50    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  207 KB (2116 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.24u 0.13s 25.37t   Elapsed:  00:00:01
  Total cpu time:  25.24u 0.13s 25.37t   Elapsed:  00:00:01
  Start:  Fri May 10 02:03:27 2013   End:  Fri May 10 02:03:28 2013

GO:0048709 "oligodendrocyte differentiation" evidence=IEA

GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0004861 "cyclin-dependent protein serine/threonine kinase inhibitor activity" evidence=IDA

GO:0007050 "cell cycle arrest" evidence=IDA

GO:0008285 "negative regulation of cell proliferation" evidence=IDA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IDA

GO:0030308 "negative regulation of cell growth" evidence=IDA

GO:0042326 "negative regulation of phosphorylation" evidence=IDA

GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006917 "induction of apoptosis" evidence=IDA

GO:0019901 "protein kinase binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	263
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-04
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	9e-04
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	0.001
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.001

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           A  G LE++  L+ + AD+ N +D++    +H AA+ G   +V  LLE 
Sbjct: 36  ARNGNLEIVKLLLEHGADV-NAKDKDGNTALHLAARNGNLEIVKLLLEH 83

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           AS G LE++  L+   AD  N +D +   P+H AAK G   +V  LLEK
Sbjct: 15  ASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEK 62

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDV 137
           A  G LE++  L+   AD  N RD++   P+H AA+ G  +VV  LL+       G+D  
Sbjct: 48  AKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNLDVVKLLLKH------GADVN 100

Query: 138 AYGLLRKHPKLAWAEIAGTGKILELL 163
           A     + P L  A   G  ++++LL
Sbjct: 101 ARDKDGRTP-LHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 75  FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
            + A  G LEL+  L+   AD   V   +    +H AA+ G   +V  LLE 
Sbjct: 2   HLAAKNGNLELVKLLLEKGAD---VNLGDTDTALHLAARNGNLEIVKLLLEH 50

Length = 91

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.2 bits (84), Expect = 9e-04
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 89  LIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           L+ +     N  D     P+H AAK G   +V +LL+ 
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKP 38

Length = 56

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLL 124
           A  G L+++  L+++ AD  N RD++   P+H AAK G   VV  LL
Sbjct: 81  ARNGNLDVVKLLLKHGAD-VNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 35.7 bits (83), Expect = 0.001
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 75  FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLL 124
              A +G+LEL+  L+    D  N  DE+    +H AA+ G   V+  LL
Sbjct: 6   HKAAISGRLELVKYLLEKGVD-INRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	263
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.96
PHA02791	284	ankyrin-like protein; Provisional	99.92
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.9
PHA02874	434	ankyrin repeat protein; Provisional	99.9
PHA02878	477	ankyrin repeat protein; Provisional	99.9
PHA02875	413	ankyrin repeat protein; Provisional	99.9
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.89
PHA02791	284	ankyrin-like protein; Provisional	99.89
PHA03095	471	ankyrin-like protein; Provisional	99.88
PHA03100	480	ankyrin repeat protein; Provisional	99.88
PHA02859	209	ankyrin repeat protein; Provisional	99.88
PHA02874	434	ankyrin repeat protein; Provisional	99.87
PHA02946	446	ankyin-like protein; Provisional	99.87
PHA02876	682	ankyrin repeat protein; Provisional	99.87
PHA02946	446	ankyin-like protein; Provisional	99.87
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.87
PHA02875	413	ankyrin repeat protein; Provisional	99.87
PHA03100	480	ankyrin repeat protein; Provisional	99.86
PHA02876	682	ankyrin repeat protein; Provisional	99.86
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.83
PHA02798	489	ankyrin-like protein; Provisional	99.8
PHA02743	166	Viral ankyrin protein; Provisional	99.8
PHA02989	494	ankyrin repeat protein; Provisional	99.8
KOG0508	615	consensus Ankyrin repeat protein [General function	99.8
PHA03095	471	ankyrin-like protein; Provisional	99.79
KOG0510	929	consensus Ankyrin repeat protein [General function	99.79
PHA02917	661	ankyrin-like protein; Provisional	99.79
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.79
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.79
PHA02878	477	ankyrin repeat protein; Provisional	99.79
KOG0510	929	consensus Ankyrin repeat protein [General function	99.78
PHA02989	494	ankyrin repeat protein; Provisional	99.78
PHA02741	169	hypothetical protein; Provisional	99.77
PHA02798	489	ankyrin-like protein; Provisional	99.77
PHA02730	672	ankyrin-like protein; Provisional	99.77
PHA02859	209	ankyrin repeat protein; Provisional	99.77
PHA02736	154	Viral ankyrin protein; Provisional	99.76
PHA02917	661	ankyrin-like protein; Provisional	99.75
KOG0508	615	consensus Ankyrin repeat protein [General function	99.74
PHA02795	437	ankyrin-like protein; Provisional	99.74
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.72
PHA02730	672	ankyrin-like protein; Provisional	99.72
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.71
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.71
PHA02795	437	ankyrin-like protein; Provisional	99.7
PHA02792	631	ankyrin-like protein; Provisional	99.7
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.66
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.63
KOG0514	452	consensus Ankyrin repeat protein [General function	99.62
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.62
PHA02884	300	ankyrin repeat protein; Provisional	99.62
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.61
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.6
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.6
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.58
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.57
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.57
PHA02884	300	ankyrin repeat protein; Provisional	99.55
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.53
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.53
PHA02741	169	hypothetical protein; Provisional	99.52
PHA02743	166	Viral ankyrin protein; Provisional	99.49
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.45
PHA02736	154	Viral ankyrin protein; Provisional	99.44
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.43
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.42
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.4
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.38
PHA02792	631	ankyrin-like protein; Provisional	99.37
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.35
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.31
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.3
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.29
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.28
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.26
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.17
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.17
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.15
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.13
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.1
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.07
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.07
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.05
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.01
KOG0514	452	consensus Ankyrin repeat protein [General function	98.96
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	98.94
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	98.86
PF13606	30	Ank_3: Ankyrin repeat	98.69
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	98.65
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.5
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.44
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.39
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.35
PF13606	30	Ank_3: Ankyrin repeat	98.25
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.19
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.14
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.14
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.08
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.07
KOG0511	516	consensus Ankyrin repeat protein [General function	98.06
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.03
KOG0522	560	consensus Ankyrin repeat protein [General function	97.99
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	97.8
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.67
KOG0522	560	consensus Ankyrin repeat protein [General function	97.67
KOG0783	1267	consensus Uncharacterized conserved protein, conta	97.57
KOG2384	223	consensus Major histocompatibility complex protein	97.38
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.15
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.04
KOG0511	516	consensus Ankyrin repeat protein [General function	96.98
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.85
KOG0521	785	consensus Putative GTPase activating proteins (GAP	96.73
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	96.61
KOG0521	785	consensus Putative GTPase activating proteins (GAP	96.58
KOG2505	591	consensus Ankyrin repeat protein [General function	95.59
KOG2384	223	consensus Major histocompatibility complex protein	95.44
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	94.48
KOG2505	591	consensus Ankyrin repeat protein [General function	90.77
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	88.26
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	82.06

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=2.3e-29  Score=207.54  Aligned_cols=179  Identities=18%  Similarity=0.072  Sum_probs=148.9

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCcHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRY-EADLPNVRDEENLLPI  108 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~TPL  108 (263)
                      .|-+++||||+||.-|+.++|++|+++ -.-.++.+ ++.|....++||..|+.++|+.|+.+ |++ +|++++.|.|||
T Consensus        34 ~dqD~Rt~LHwa~S~g~~eiv~fLlsq-~nv~~ddk-DdaGWtPlhia~s~g~~evVk~Ll~r~~ad-vna~tn~G~T~L  110 (226)
T KOG4412|consen   34 DDQDGRTPLHWACSFGHVEIVYFLLSQ-PNVKPDDK-DDAGWTPLHIAASNGNDEVVKELLNRSGAD-VNATTNGGQTCL  110 (226)
T ss_pred             ccccCCceeeeeeecCchhHHHHHHhc-CCCCCCCc-cccCCchhhhhhhcCcHHHHHHHhcCCCCC-cceecCCCccee
Confidence            344788999999999999999888876 23344444 55567777889999999999999888 888 499999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      |+|+..|+.+|+++|+                  .. +..+.++|+.|.||||.||..       |.++++++||+.++.
T Consensus       111 HyAagK~r~eIaqlLl------------------e~-ga~i~~kD~~~qtplHRAAav-------Gklkvie~Li~~~a~  164 (226)
T KOG4412|consen  111 HYAAGKGRLEIAQLLL------------------EK-GALIRIKDKQGQTPLHRAAAV-------GKLKVIEYLISQGAP  164 (226)
T ss_pred             hhhhcCChhhHHHHHH------------------hc-CCCCcccccccCchhHHHHhc-------cchhhHHHHHhcCCC
Confidence            9999988888888885                  33 466889999999999999987       889999999999999


Q ss_pred             CCCCCCCCCCCCCCC-CChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceeccccccC
Q 037827          189 VQEEYNPHAHAHSEN-VDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATNDVRLP  252 (263)
Q Consensus       189 v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  252 (263)
                      +|..++-+.+|.+-+ ||+ .             .++|++|+..|||.    +|+ |||..|+++++.-
T Consensus       165 ~n~qDk~G~TpL~~al~e~-~-------------~d~a~lLV~~gAd~~~edke~-t~~~~a~~~l~~a  218 (226)
T KOG4412|consen  165 LNTQDKYGFTPLHHALAEG-H-------------PDVAVLLVRAGADTDREDKEG-TALRIACNELLEA  218 (226)
T ss_pred             CCcccccCccHHHHHHhcc-C-------------chHHHHHHHhccceeeccccC-chHHHHHHHHHHH
Confidence            999998887776665 555 3             88999999999999    656 9999999998753

>PHA02791 ankyrin-like protein; Provisional

Probab=99.92  E-value=1.7e-24  Score=194.82  Aligned_cols=153  Identities=10%  Similarity=0.003  Sum_probs=128.4

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      .+|.+|+||||+|+..|+.++++.|++.  +..++..   ++....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~--ga~~n~~---d~~TpLh~Aa~~g~~eiV~lLL~~Gadv-n~~d~~G~TpL   98 (284)
T PHA02791         25 KADVHGHSALYYAIADNNVRLVCTLLNA--GALKNLL---ENEFPLHQAATLEDTKIVKILLFSGMDD-SQFDDKGNTAL   98 (284)
T ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHC--cCCCcCC---CCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence            4688899999999999999999999987  2333322   3467888999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCcccccc-CCCchHHHHHhcCCCCCc
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELLSKRPKAFA  171 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlAA~~~~~f~  171 (263)
                      |+|+..|+.++|++|++++++.                ..++.+++..|++..+..   .| ..|.||||+||++     
T Consensus        99 h~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~---~d~~~g~TpLh~Aa~~-----  170 (284)
T PHA02791         99 YYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKN-----  170 (284)
T ss_pred             HHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc---cccccCccHHHHHHHc-----
Confidence            9999999999999999999861                356778888888875443   23 3589999999998     


Q ss_pred             CCcchHHHHHHcccCCCCCCCCCCCC
Q 037827          172 SGIRLGYWKGLLYQWIPVQEEYNPHA  197 (263)
Q Consensus       172 s~~~~~~~~~li~~~~~v~~~~~~~~  197 (263)
                        ++.++++.|+..|++++..+..+.
T Consensus       171 --g~~eiv~lLL~~gAd~n~~d~~g~  194 (284)
T PHA02791        171 --GHVDMMILLLDYMTSTNTNNSLLF  194 (284)
T ss_pred             --CCHHHHHHHHHCCCCCCcccCCCC
Confidence              788999999999999998875443

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.90  E-value=3.7e-24  Score=176.76  Aligned_cols=141  Identities=16%  Similarity=0.101  Sum_probs=124.1

Q ss_pred             hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827           27 KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL  106 (263)
Q Consensus        27 ~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T  106 (263)
                      .+.+|..||||||.||..|+.|+|+.|+.. ....++++ +.+|.+..||||.+|..+|+++|+++|+.+ +++|+.|.|
T Consensus        65 ~ddkDdaGWtPlhia~s~g~~evVk~Ll~r-~~advna~-tn~G~T~LHyAagK~r~eIaqlLle~ga~i-~~kD~~~qt  141 (226)
T KOG4412|consen   65 PDDKDDAGWTPLHIAASNGNDEVVKELLNR-SGADVNAT-TNGGQTCLHYAAGKGRLEIAQLLLEKGALI-RIKDKQGQT  141 (226)
T ss_pred             CCCccccCCchhhhhhhcCcHHHHHHHhcC-CCCCccee-cCCCcceehhhhcCChhhHHHHHHhcCCCC-cccccccCc
Confidence            357899999999999999999999999998 45556554 778888899999999999999999999995 999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~  186 (263)
                      |||.||.-|..++++||++                  . ++.++.+|+.|+||||.|-.-       ++-++...|+.+|
T Consensus       142 plHRAAavGklkvie~Li~------------------~-~a~~n~qDk~G~TpL~~al~e-------~~~d~a~lLV~~g  195 (226)
T KOG4412|consen  142 PLHRAAAVGKLKVIEYLIS------------------Q-GAPLNTQDKYGFTPLHHALAE-------GHPDVAVLLVRAG  195 (226)
T ss_pred             hhHHHHhccchhhHHHHHh------------------c-CCCCCcccccCccHHHHHHhc-------cCchHHHHHHHhc
Confidence            9999999999999999964                  3 355789999999999999433       5668888899999


Q ss_pred             CCCCCCCCCC
Q 037827          187 IPVQEEYNPH  196 (263)
Q Consensus       187 ~~v~~~~~~~  196 (263)
                      ++++..++++
T Consensus       196 Ad~~~edke~  205 (226)
T KOG4412|consen  196 ADTDREDKEG  205 (226)
T ss_pred             cceeeccccC
Confidence            9999998766

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.90  E-value=4.7e-23  Score=195.13  Aligned_cols=207  Identities=16%  Similarity=0.074  Sum_probs=155.6

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC------------
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL------------   96 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l------------   96 (263)
                      ..+.++.||||.|+..|+.++|++|++.  +..++.. +..|....++|+..|+.+++++|+++|+++            
T Consensus        30 ~~~~~~~tpL~~A~~~g~~~iv~~Ll~~--Ga~~n~~-~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~  106 (434)
T PHA02874         30 ISVDETTTPLIDAIRSGDAKIVELFIKH--GADINHI-NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDM  106 (434)
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHH
Confidence            3456788999999999999999999987  3444333 444566777899999988888888776542            


Q ss_pred             ----------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCcccc
Q 037827           97 ----------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWA  151 (263)
Q Consensus        97 ----------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~  151 (263)
                                ++.+|..|.||||+|+..|+.++|++|++.|+++               ..+..+++..|+..+ ..++.
T Consensus       107 i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-~~~n~  185 (434)
T PHA02874        107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG-AYANV  185 (434)
T ss_pred             HHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCC
Confidence                      3678889999999999999999999999988862               567788888888774 44677


Q ss_pred             ccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCC----------------CChhhhhhhccc
Q 037827          152 EIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSEN----------------VDGDLEKQLSET  215 (263)
Q Consensus       152 ~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~----------------~~~~~~~~~~~~  215 (263)
                      +|..|.||||+|++.       ++.++++.|+..|++++..+..+.++.+.+                ++..+..+.+.+
T Consensus       186 ~~~~g~tpL~~A~~~-------g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpL  258 (434)
T PHA02874        186 KDNNGESPLHNAAEY-------GDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPL  258 (434)
T ss_pred             CCCCCCCHHHHHHHc-------CCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHH
Confidence            889999999999987       677999999999988877765554444332                111222333444


Q ss_pred             cccccc---hhhhHHHHhhhccc----cccCCccceec
Q 037827          216 SHSAFG---FELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       216 ~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      .+++..   .++..+|+..|+|+    +.|.|||++|.
T Consensus       259 h~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~  296 (434)
T PHA02874        259 HHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAF  296 (434)
T ss_pred             HHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence            444432   47788888889999    88999999995

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.90  E-value=4.5e-23  Score=197.56  Aligned_cols=140  Identities=19%  Similarity=0.117  Sum_probs=116.0

Q ss_pred             HHHHHHHHcCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCC
Q 037827           84 ELISTLIRYEADLPNVRDEE-NLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPK  147 (263)
Q Consensus        84 eiv~~Ll~~ga~l~~~~d~~-G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~  147 (263)
                      +++++|+++|+++ +.+|.. |+||||+|+..|+.++|++|++.|+++               ..+..+++..|+..+ .
T Consensus       148 ~iv~~Ll~~gadi-n~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-a  225 (477)
T PHA02878        148 EITKLLLSYGADI-NMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG-A  225 (477)
T ss_pred             HHHHHHHHcCCCC-CccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC-C
Confidence            4788888899995 999998 999999999999999999999999872               567888899898874 5


Q ss_pred             ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCC-CCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827          148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYN-PHAHAHSENVDGDLEKQLSETSHSAFGFELAY  226 (263)
Q Consensus       148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                      .++.+|..|.||||+|+.+.      ++.++++.|+..|++++..+. .+.+|.|.+               ....++..
T Consensus       226 ~in~~d~~g~TpLh~A~~~~------~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A---------------~~~~~~v~  284 (477)
T PHA02878        226 STDARDKCGNTPLHISVGYC------KDYDILKLLLEHGVDVNAKSYILGLTALHSS---------------IKSERKLK  284 (477)
T ss_pred             CCCCCCCCCCCHHHHHHHhc------CCHHHHHHHHHcCCCCCccCCCCCCCHHHHH---------------ccCHHHHH
Confidence            57889999999999999752      578999999999999998753 344444333               22356678


Q ss_pred             HHHhhhccc----cccCCccceec
Q 037827          227 LLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       227 ~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +|+..|||+    +.|.|||++|.
T Consensus       285 ~Ll~~gadin~~d~~g~TpL~~A~  308 (477)
T PHA02878        285 LLLEYGADINSLNSYKLTPLSSAV  308 (477)
T ss_pred             HHHHCCCCCCCcCCCCCCHHHHHH
Confidence            899999999    88999999995

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.90  E-value=4.3e-23  Score=193.74  Aligned_cols=195  Identities=11%  Similarity=0.007  Sum_probs=157.9

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+.+|.||||.|+..|+.++++.|++.  +...+.. +..+....++|+..|+.+++++|++.|++..+..+.+|+|||
T Consensus        30 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~--ga~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL  106 (413)
T PHA02875         30 FEIYDGISPIKLAMKFRDSEAIKLLMKH--GAIPDVK-YPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPL  106 (413)
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCcccc-CCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHH
Confidence            4566899999999999999999999987  2333222 345567788999999999999999999986567788999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+|+..|+.++|++|++.|+++               ..+..+++..|+..+ ..++.+|..|.||||+|+..       
T Consensus       107 ~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~TpL~~A~~~-------  178 (413)
T PHA02875        107 HLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK-ACLDIEDCCGCTPLIIAMAK-------  178 (413)
T ss_pred             HHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHc-------
Confidence            9999999999999999999973               567888888888874 45688899999999999997       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCCC-CCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc-------cccCCcccee
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPHA-HAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF-------RVSTTPLTLA  245 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  245 (263)
                      ++.++++.|+..|++++..+..+. ++.+.             +......++..+|+.+|+|.       .++.|||+++
T Consensus       179 g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~-------------A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~  245 (413)
T PHA02875        179 GDIAICKMLLDSGANIDYFGKNGCVAALCY-------------AIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMI  245 (413)
T ss_pred             CCHHHHHHHHhCCCCCCcCCCCCCchHHHH-------------HHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHH
Confidence            678999999999999987754331 22221             22223378899999999998       5789999987


Q ss_pred             cc
Q 037827          246 TN  247 (263)
Q Consensus       246 ~~  247 (263)
                      .+
T Consensus       246 ~~  247 (413)
T PHA02875        246 CN  247 (413)
T ss_pred             Hh
Confidence            53

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.89  E-value=2.4e-23  Score=198.40  Aligned_cols=191  Identities=18%  Similarity=0.115  Sum_probs=155.5

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcHHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRD-EENLLPIHRAA  112 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TPLh~Aa  112 (263)
                      -...++.|+..|+++.|+.+++. ....++.. +++|-...||||.+++++++++||++|+++ |+.+ .-|.||||+|+
T Consensus        44 ~~~~~v~A~q~G~l~~v~~lve~-~g~~v~~~-D~~g~tlLHWAAiNNrl~v~r~li~~gadv-n~~gG~l~stPLHWAa  120 (600)
T KOG0509|consen   44 SLDDIVKATQYGELETVKELVES-EGESVNNP-DREGVTLLHWAAINNRLDVARYLISHGADV-NAIGGVLGSTPLHWAA  120 (600)
T ss_pred             hhhhhhhHhhcchHHHHHHHHhh-cCcCCCCC-CcCCccceeHHHHcCcHHHHHHHHHcCCCc-cccCCCCCCCcchHHH
Confidence            45678999999999999999998 45566555 557777788999999999999999999995 9998 67889999999


Q ss_pred             HcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchH
Q 037827          113 KQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLG  177 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~  177 (263)
                      ++||..+|.+|+++|++|               ..++.-++.+++.++ .+++.+|.+|+||||.||.++.       -.
T Consensus       121 r~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~-~d~d~~D~~grTpLmwAaykg~-------~~  192 (600)
T KOG0509|consen  121 RNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG-ADIDLRDNNGRTPLMWAAYKGF-------AL  192 (600)
T ss_pred             HcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc-ccCCCcCCCCCCHHHHHHHhcc-------cH
Confidence            999999999999999985               556666777788876 6689999999999999999843       34


Q ss_pred             HHHHHcccCCCCCCCC-CCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceeccc
Q 037827          178 YWKGLLYQWIPVQEEY-NPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATND  248 (263)
Q Consensus       178 ~~~~li~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  248 (263)
                      .+.+|+.-++.++..+ +.+++|.|-++..-.             -++-++|+..|+++    ..|+||++||...
T Consensus       193 ~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN-------------~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  193 FVRRLLKFGASLLLTDDNHGNTPLHWAVVGGN-------------LTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             HHHHHHHhcccccccccccCCchHHHHHhcCC-------------cceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            4888888888888887 778888886655443             22233555666777    6789999999644

>PHA02791 ankyrin-like protein; Provisional

Probab=99.89  E-value=2.9e-22  Score=180.36  Aligned_cols=182  Identities=14%  Similarity=0.093  Sum_probs=151.5

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC-cHHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL-LPIHRA  111 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~-TPLh~A  111 (263)
                      +++||||.|+..|+.++|+.|+..  +..++.. +..|....++||..|+.+++++|+++|+++ +.++..|+ ||||+|
T Consensus        60 d~~TpLh~Aa~~g~~eiV~lLL~~--Gadvn~~-d~~G~TpLh~Aa~~g~~eivk~Ll~~gadi-n~~~~~g~~TpL~~A  135 (284)
T PHA02791         60 ENEFPLHQAATLEDTKIVKILLFS--GMDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHA  135 (284)
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccCCCCCcHHHHHH
Confidence            478999999999999999999987  3444444 667788999999999999999999999995 99999986 899999


Q ss_pred             HHcCCHHHHHHHHhCCCC---------C-----CCCCHHHHHHHHHhCCCccccccCCCchH-HHHHhcCCCCCcCCcch
Q 037827          112 AKQGQRNVVCYLLEKTRA---------P-----LDGSDDVAYGLLRKHPKLAWAEIAGTGKI-LELLSKRPKAFASGIRL  176 (263)
Q Consensus       112 a~~g~~evv~~Ll~~~a~---------p-----~~~~~~va~~Ll~~~~~~~~~~D~~G~TP-LHlAA~~~~~f~s~~~~  176 (263)
                      +..|+.++|++|++++++         |     ..|+.+++..|++.+ +.++.+|..|.|| ||+||+.       ++.
T Consensus       136 a~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~g-Ad~n~~d~~g~t~~L~~Aa~~-------~~~  207 (284)
T PHA02791        136 VMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDN-------KDL  207 (284)
T ss_pred             HHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCcccCCCCChHHHHHHHc-------CCH
Confidence            999999999999998653         2     688999999999975 4578899999987 9999998       788


Q ss_pred             HHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhcccccc--CCccceec
Q 037827          177 GYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSFRVS--TTPLTLAT  246 (263)
Q Consensus       177 ~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  246 (263)
                      ++++.|+..|++++..+....+.       +.             .|++.+||..+|++|..  +.-|+.++
T Consensus       208 e~v~lLl~~Ga~in~~~~~~~~l-------~~-------------~e~~~~ll~~~~~~~~~~~~~~~~~~~  259 (284)
T PHA02791        208 EMLQALFKYDINIYSVNLENVLL-------DD-------------AEIAKMIIEKHVEYKSDSYTKDLDIVK  259 (284)
T ss_pred             HHHHHHHHCCCCCccCcccCccC-------CC-------------HHHHHHHHHhhhhhcccccccchhhhh
Confidence            99999999999999887633111       12             55799999999999433  33466664

>PHA03095 ankyrin-like protein; Provisional

Probab=99.88  E-value=4.2e-22  Score=189.46  Aligned_cols=208  Identities=13%  Similarity=0.019  Sum_probs=151.5

Q ss_pred             hhcccChHHHHHHHHcC---CHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC-cHHHHHHHHHcCCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLED---DWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG-KLELISTLIRYEADLPNVRDEEN  104 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G---~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G-~~eiv~~Ll~~ga~l~~~~d~~G  104 (263)
                      .++..|.||||.|+..|   +.++++.|++.  +..++.. +..|.+..++|+..| ..+++++|+++|+++ +.+|..|
T Consensus        42 ~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~--Gadin~~-~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~i-n~~~~~g  117 (471)
T PHA03095         42 FRGEYGKTPLHLYLHYSSEKVKDIVRLLLEA--GADVNAP-ERCGFTPLHLYLYNATTLDVIKLLIKAGADV-NAKDKVG  117 (471)
T ss_pred             cCCCCCCCHHHHHHHhcCCChHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCCcHHHHHHHHHcCCCC-CCCCCCC
Confidence            45677899999999988   88999999887  4555555 456788888999999 599999999999994 9999999


Q ss_pred             CcHHHHHH--HcCCHHHHHHHHhCCCCC-----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827          105 LLPIHRAA--KQGQRNVVCYLLEKTRAP-----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK  165 (263)
Q Consensus       105 ~TPLh~Aa--~~g~~evv~~Ll~~~a~p-----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~  165 (263)
                      +||||+|+  ..++.+++++|++.|+++                 .....+++..|+..+.. ++..|..|.||||+++.
T Consensus       118 ~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~-~~~~d~~g~t~Lh~~~~  196 (471)
T PHA03095        118 RTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGAD-VYAVDDRFRSLLHHHLQ  196 (471)
T ss_pred             CCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence            99999999  566889999999988863                 23356677777776544 44458888888888776


Q ss_pred             CCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCC------------------Ch--hhhhhhcccccccc--chh
Q 037827          166 RPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENV------------------DG--DLEKQLSETSHSAF--GFE  223 (263)
Q Consensus       166 ~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~------------------~~--~~~~~~~~~~~~~~--~~~  223 (263)
                      ...     +...+++.|+..|++++..+..+.++.|.++                  |-  .+..+-+.+.+++.  ..+
T Consensus       197 ~~~-----~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~  271 (471)
T PHA03095        197 SFK-----PRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPR  271 (471)
T ss_pred             HCC-----CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence            532     4557778888888887777755544443321                  11  12233344444544  356


Q ss_pred             hhHHHHhhhccc----cccCCccceec
Q 037827          224 LAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       224 ~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +...|+..|||.    +.|.|||++|.
T Consensus       272 ~v~~LL~~gad~n~~~~~g~tpl~~A~  298 (471)
T PHA03095        272 ACRRLIALGADINAVSSDGNTPLSLMV  298 (471)
T ss_pred             HHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            777888889998    88999999994

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.88  E-value=4.4e-22  Score=189.91  Aligned_cols=206  Identities=15%  Similarity=0.048  Sum_probs=160.7

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHH-----HHhCCcHHHHHHHHHcCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFI-----VASTGKLELISTLIRYEADLPNVRDEE  103 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~-----AA~~G~~eiv~~Ll~~ga~l~~~~d~~  103 (263)
                      ..+..+.+|||.|+..|+.++|+.|++.  +..++.. +..+....++     |+..|+.+++++|+++|+++ +..|..
T Consensus        30 ~~~~~~~t~L~~A~~~~~~~ivk~Ll~~--g~~~~~~-~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~  105 (480)
T PHA03100         30 YSYKKPVLPLYLAKEARNIDVVKILLDN--GADINSS-TKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANV-NAPDNN  105 (480)
T ss_pred             hhhcccchhhhhhhccCCHHHHHHHHHc--CCCCCCc-cccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCC-CCCCCC
Confidence            4567899999999999999999999987  3444433 4445667778     99999999999999999996 999999


Q ss_pred             CCcHHHHHH--HcCCHHHHHHHHhCCCCC---------------CCC--CHHHHHHHHHhCCCccccccCCCchHHHHHh
Q 037827          104 NLLPIHRAA--KQGQRNVVCYLLEKTRAP---------------LDG--SDDVAYGLLRKHPKLAWAEIAGTGKILELLS  164 (263)
Q Consensus       104 G~TPLh~Aa--~~g~~evv~~Ll~~~a~p---------------~~~--~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA  164 (263)
                      |.||||+|+  ..|+.++|++|+++|+++               ..+  ..+++..|++.+. .++.+|.+|.||||+|+
T Consensus       106 g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~-din~~d~~g~tpL~~A~  184 (480)
T PHA03100        106 GITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGV-DINAKNRYGYTPLHIAV  184 (480)
T ss_pred             CCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCC-CcccccCCCCCHHHHHH
Confidence            999999999  999999999999999862               455  8889999988754 46888999999999999


Q ss_pred             cCCCCCcCCcchHHHHHHcccCCCCCCCCCCC------CCCCCC------------------CCChh--hhhhhcccccc
Q 037827          165 KRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH------AHAHSE------------------NVDGD--LEKQLSETSHS  218 (263)
Q Consensus       165 ~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~------~~~~~~------------------~~~~~--~~~~~~~~~~~  218 (263)
                      +.       ++.++++.|+..|++++..+..+      .++.+.                  +++.+  +..+-+.+.++
T Consensus       185 ~~-------~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A  257 (480)
T PHA03100        185 EK-------GNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYA  257 (480)
T ss_pred             Hh-------CCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence            97       67899999999999998775332      111110                  12211  23334444455


Q ss_pred             ccc--hhhhHHHHhhhccc----cccCCccceec
Q 037827          219 AFG--FELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       219 ~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ...  .++..+|+..|+|.    +.|.|||++|.
T Consensus       258 ~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~  291 (480)
T PHA03100        258 VYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAI  291 (480)
T ss_pred             HHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence            543  55666777788877    67888888885

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.88  E-value=3.1e-22  Score=172.56  Aligned_cols=176  Identities=14%  Similarity=0.111  Sum_probs=138.0

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhC--CcHHHHHHHHHcCCCCCCCCC-CCCCcH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVAST--GKLELISTLIRYEADLPNVRD-EENLLP  107 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~--G~~eiv~~Ll~~ga~l~~~~d-~~G~TP  107 (263)
                      ....++|||.|+..|+.+.|+.|+..  ..   . .+..|..+.++|+..  |+.+++++|+++|+++ +.++ ..|+||
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~--~n---~-~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~Tp   90 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKF--VN---D-CNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSA   90 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHh--hh---c-cCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCH
Confidence            56679999999999999999999975  21   2 245567888889875  4899999999999995 9987 589999


Q ss_pred             HHHHHHc---CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcc
Q 037827          108 IHRAAKQ---GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLY  184 (263)
Q Consensus       108 Lh~Aa~~---g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~  184 (263)
                      ||+|+..   ++.+++++|+++                   +..++.+|.+|.||||+|+...     .++.++++.|+.
T Consensus        91 Lh~a~~~~~~~~~eiv~~Ll~~-------------------gadin~~d~~G~TpLh~a~~~~-----~~~~~iv~~Li~  146 (209)
T PHA02859         91 LHHYLSFNKNVEPEILKILIDS-------------------GSSITEEDEDGKNLLHMYMCNF-----NVRINVIKLLID  146 (209)
T ss_pred             HHHHHHhCccccHHHHHHHHHC-------------------CCCCCCcCCCCCCHHHHHHHhc-----cCCHHHHHHHHH
Confidence            9998864   478999888643                   3446788999999999987642     257899999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec-ccc
Q 037827          185 QWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT-NDV  249 (263)
Q Consensus       185 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~  249 (263)
                      .|++++..+..+.++.|..+.            .....++..+|+..|+++    +.|+|||++|. ++|
T Consensus       147 ~gadin~~d~~g~t~Lh~~a~------------~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~~  204 (209)
T PHA02859        147 SGVSFLNKDFDNNNILYSYIL------------FHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRNL  204 (209)
T ss_pred             cCCCcccccCCCCcHHHHHHH------------hcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhhh
Confidence            999999887655555543211            012256778899999999    78999999997 444

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.87  E-value=1.6e-21  Score=184.66  Aligned_cols=200  Identities=17%  Similarity=0.115  Sum_probs=139.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      ..|+.|+..|+++.++.|++. .+..++.. +..+....++|+..|+.++|++|+++|+++ +..+..|.||||+|+..|
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~-~~~~~n~~-~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~-n~~~~~~~t~L~~A~~~~   79 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKN-KGNCINIS-VDETTTPLIDAIRSGDAKIVELFIKHGADI-NHINTKIPHPLLTAIKIG   79 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHc-CCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcC
Confidence            368899999999999999987 56555444 445677888999999999999999999995 999999999999999999


Q ss_pred             CHHHHHHHHhCCCCC-----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCC
Q 037827          116 QRNVVCYLLEKTRAP-----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQ  190 (263)
Q Consensus       116 ~~evv~~Ll~~~a~p-----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~  190 (263)
                      +.++|++|+++|+++     .....+++..++.. +..++.+|..|.||||+|++.       ++.++++.|+..|++++
T Consensus        80 ~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~-g~d~n~~~~~g~T~Lh~A~~~-------~~~~~v~~Ll~~gad~n  151 (434)
T PHA02874         80 AHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDC-GIDVNIKDAELKTFLHYAIKK-------GDLESIKMLFEYGADVN  151 (434)
T ss_pred             CHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHC-cCCCCCCCCCCccHHHHHHHC-------CCHHHHHHHHhCCCCCC
Confidence            999999999998862     23344555555554 333556666777777777665       45666777777766666


Q ss_pred             CCCCCCCCCCCCCCC----------------hh--hhhhhccccccccc--hhhhHHHHhhhccc----cccCCccceec
Q 037827          191 EEYNPHAHAHSENVD----------------GD--LEKQLSETSHSAFG--FELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       191 ~~~~~~~~~~~~~~~----------------~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ..+..+.++.|.++.                .+  +..+.+.+.+++..  .++..+|+..|+++    +++.||||+|.
T Consensus       152 ~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~  231 (434)
T PHA02874        152 IEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAI  231 (434)
T ss_pred             CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHH
Confidence            655433333332111                10  11112222233332  45556677778777    67888888885

>PHA02946 ankyin-like protein; Provisional

Probab=99.87  E-value=1.6e-21  Score=185.84  Aligned_cols=165  Identities=12%  Similarity=0.026  Sum_probs=133.2

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC--cHHHHHHHHHcCCCCCC-CCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG--KLELISTLIRYEADLPN-VRDEENL  105 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G--~~eiv~~Ll~~ga~l~~-~~d~~G~  105 (263)
                      .+|.+|+||||.|+..|+.++|+.||+.  +..++.+ +..|.+..++|+..+  ..+++++|+++|+++ + ..|.+|.
T Consensus        67 ~~d~~G~TpLh~Aa~~g~~eiv~lLL~~--GAdin~~-d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadi-n~~~d~~g~  142 (446)
T PHA02946         67 ETDDDGNYPLHIASKINNNRIVAMLLTH--GADPNAC-DKQHKTPLYYLSGTDDEVIERINLLVQYGAKI-NNSVDEEGC  142 (446)
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCC-CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCc-ccccCCCCC
Confidence            6788899999999999999999999987  4556555 666778888888766  489999999999996 7 4799999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCC-----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCC
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTRAP-----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPK  168 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a~p-----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~  168 (263)
                      |||| ||..|+.+++++|++.|++.                 ..+..+++..|++. +..++.+|.+|.||||+||+++.
T Consensus       143 tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~-Gadin~~d~~G~TpLH~Aa~~~~  220 (446)
T PHA02946        143 GPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL-GISPSKPDHDGNTPLHIVCSKTV  220 (446)
T ss_pred             cHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCC
Confidence            9997 77789999999999999862                 23445677777776 45578899999999999998631


Q ss_pred             CCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCC
Q 037827          169 AFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVD  205 (263)
Q Consensus       169 ~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~  205 (263)
                           .+.++++.|+ .+++++..+..+.+|.+.++.
T Consensus       221 -----~~~~iv~lLl-~gadin~~d~~G~TpLh~A~~  251 (446)
T PHA02946        221 -----KNVDIINLLL-PSTDVNKQNKFGDSPLTLLIK  251 (446)
T ss_pred             -----CcHHHHHHHH-cCCCCCCCCCCCCCHHHHHHH
Confidence                 4678898888 589999998777666665443

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.87  E-value=5.5e-22  Score=197.80  Aligned_cols=208  Identities=15%  Similarity=0.103  Sum_probs=149.7

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc-----------CH--------------------------
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS-----------SI--------------------------   72 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g-----------~i--------------------------   72 (263)
                      .+..++||||.|+..|+.|+|+.|+++ +|..+... +..|           ++                          
T Consensus        37 ~~~~~~t~LH~A~~~g~~e~V~~ll~~-~~~~~~~~-~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  114 (682)
T PHA02876         37 NESIPFTAIHQALQLRQIDIVEEIIQQ-NPELIYIT-DHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNK  114 (682)
T ss_pred             cccccchHHHHHHHHHhhhHHHHHHHh-Ccccchhh-chhhccccccccCCCCccccccccccchhhcccccHHHHHHHH
Confidence            456789999999999999999999998 77744333 2212           00                          


Q ss_pred             ----------H-----------------------HHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 037827           73 ----------F-----------------------EFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNV  119 (263)
Q Consensus        73 ----------v-----------------------~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~ev  119 (263)
                                +                       ...|...|+.+++++|+++|+++ +.+|..|+||||+||..|+.++
T Consensus       115 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadv-n~~d~~G~TpLh~Aa~~G~~~i  193 (682)
T PHA02876        115 HKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADV-NAKDIYCITPIHYAAERGNAKM  193 (682)
T ss_pred             HHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHH
Confidence                      0                       00456889999999999999995 9999999999999999999999


Q ss_pred             HHHHHhCCCCC---------------CCCCHHHHHHHHHh----------------------------CCCccccccCCC
Q 037827          120 VCYLLEKTRAP---------------LDGSDDVAYGLLRK----------------------------HPKLAWAEIAGT  156 (263)
Q Consensus       120 v~~Ll~~~a~p---------------~~~~~~va~~Ll~~----------------------------~~~~~~~~D~~G  156 (263)
                      |++|+++|+++               ..++.+++..|+..                            .+..++..|..|
T Consensus       194 v~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g  273 (682)
T PHA02876        194 VNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCK  273 (682)
T ss_pred             HHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence            99999999862               34455555444332                            233456678899


Q ss_pred             chHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCC----Chh---------------hhhhhccccc
Q 037827          157 GKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENV----DGD---------------LEKQLSETSH  217 (263)
Q Consensus       157 ~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~~  217 (263)
                      .||||+|++.+      ....+++.|+..|++++..+..+.++.+.++    +.+               +..+.+.+-+
T Consensus       274 ~TpLh~Aa~~~------~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~  347 (682)
T PHA02876        274 NTPLHHASQAP------SLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQ  347 (682)
T ss_pred             CCHHHHHHhCC------CHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHH
Confidence            99999999873      2346889999999999988755544444322    111               1112222223


Q ss_pred             ccc---chhhhHHHHhhhccc----cccCCccceec
Q 037827          218 SAF---GFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       218 ~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ++.   ..++..+|+..|++.    +.|.||||+|.
T Consensus       348 A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa  383 (682)
T PHA02876        348 ASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAA  383 (682)
T ss_pred             HHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHH
Confidence            322   356777888889988    77899999995

>PHA02946 ankyin-like protein; Provisional

Probab=99.87  E-value=2.2e-21  Score=184.95  Aligned_cols=191  Identities=14%  Similarity=0.048  Sum_probs=151.8

Q ss_pred             ChHHHHHHH--HcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           34 NYKQVTRYL--LEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        34 ~~t~Lh~Aa--~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      +.++||.++  ..++.++|+.|++.  +..++.. +..|.+..++||..|+.++|++|+++|+++ +.+|.+|+||||+|
T Consensus        37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~--Gadvn~~-d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdi-n~~d~~g~TpLh~A  112 (446)
T PHA02946         37 NYHILHAYCGIKGLDERFVEELLHR--GYSPNET-DDDGNYPLHIASKINNNRIVAMLLTHGADP-NACDKQHKTPLYYL  112 (446)
T ss_pred             CChHHHHHHHhcCCCHHHHHHHHHC--cCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHH
Confidence            478999875  34578999999987  4555555 667789999999999999999999999995 99999999999999


Q ss_pred             HHcCC--HHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCc
Q 037827          112 AKQGQ--RNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGI  174 (263)
Q Consensus       112 a~~g~--~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~  174 (263)
                      +..++  .+++++|+++|++.               ..+..+++..|+.. +..++.+|..|.||||+|+...     .+
T Consensus       113 ~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~-gad~~~~d~~G~t~Lh~A~~~~-----~~  186 (446)
T PHA02946        113 SGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSI-GFEARIVDKFGKNHIHRHLMSD-----NP  186 (446)
T ss_pred             HHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhc-cccccccCCCCCCHHHHHHHhc-----CC
Confidence            98764  89999999999862               34667888888876 4567889999999999988753     24


Q ss_pred             chHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          175 RLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       175 ~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +.++++.|+..|++++..+.-+.+|.|.++....           -..++..+|+ .++++    +.|.||||+|.
T Consensus       187 ~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~-----------~~~~iv~lLl-~gadin~~d~~G~TpLh~A~  250 (446)
T PHA02946        187 KASTISWMMKLGISPSKPDHDGNTPLHIVCSKTV-----------KNVDIINLLL-PSTDVNKQNKFGDSPLTLLI  250 (446)
T ss_pred             CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC-----------CcHHHHHHHH-cCCCCCCCCCCCCCHHHHHH
Confidence            5789999999999999988777777665553210           0133445555 48898    78999999985

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.87  E-value=2.1e-21  Score=193.46  Aligned_cols=166  Identities=15%  Similarity=0.026  Sum_probs=130.0

Q ss_pred             cccChHHHHHHHH--cCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCc--HHHHHHHHHcCCCCCCCCCCCCCc
Q 037827           31 DIANYKQVTRYLL--EDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGK--LELISTLIRYEADLPNVRDEENLL  106 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~--~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~--~eiv~~Ll~~ga~l~~~~d~~G~T  106 (263)
                      +..|+||||.|+.  .|+.++++.|++.  +..++.. +..|.+..++|+..|+  .++|++|+++|+++ +.+|..|+|
T Consensus       174 d~~G~TpLH~A~~n~~~~~eIVklLLe~--GADVN~k-D~~G~TPLH~Aa~~g~~~~eIVklLLe~GADV-N~kD~~G~T  249 (764)
T PHA02716        174 KKTGYGILHAYLGNMYVDIDILEWLCNN--GVNVNLQ-NNHLITPLHTYLITGNVCASVIKKIIELGGDM-DMKCVNGMS  249 (764)
T ss_pred             CCCCCcHHHHHHHhccCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC-CCCCCCCCC
Confidence            6679999998864  4688999999987  4566555 5667888899999995  58999999999994 999999999


Q ss_pred             HHHHH-------------------------------------HHcCCHHHHHHHHhCCCCC-----------------CC
Q 037827          107 PIHRA-------------------------------------AKQGQRNVVCYLLEKTRAP-----------------LD  132 (263)
Q Consensus       107 PLh~A-------------------------------------a~~g~~evv~~Ll~~~a~p-----------------~~  132 (263)
                      |||+|                                     +..|+.++|++|+++|++.                 ..
T Consensus       250 PLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~  329 (764)
T PHA02716        250 PIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHN  329 (764)
T ss_pred             HHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhC
Confidence            99975                                     4568889999999999861                 23


Q ss_pred             CCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCC-------cCCcchHHHHHHcccCCCCCCCCCCCCCCCC
Q 037827          133 GSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAF-------ASGIRLGYWKGLLYQWIPVQEEYNPHAHAHS  201 (263)
Q Consensus       133 ~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f-------~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~  201 (263)
                      +..+++..|++. +..++.+|..|.||||+|+......       ...++.++++.|+..|++++..+..+.+|.+
T Consensus       330 ~~~eIVklLLe~-GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh  404 (764)
T PHA02716        330 ISTDIIKLLHEY-GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLT  404 (764)
T ss_pred             CCchHHHHHHHc-CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHH
Confidence            456788888876 4567889999999999887531110       1136789999999999999998866555543

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.87  E-value=2.4e-21  Score=181.96  Aligned_cols=188  Identities=13%  Similarity=-0.016  Sum_probs=155.1

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAK  113 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~  113 (263)
                      .+++||.|+..|+.++++.|++.  +..++.. ...|....++|+..|+.+++++|+++|++ ++.++.+|+||||.|+.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~--g~~~n~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~t~L~~A~~   77 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDI--GINPNFE-IYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYPDIESELHDAVE   77 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHC--CCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCcccHHHHHHH
Confidence            46899999999999999999987  3344333 44568888999999999999999999999 59999999999999999


Q ss_pred             cCCHHHHHHHHhCCCC-----------C-----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchH
Q 037827          114 QGQRNVVCYLLEKTRA-----------P-----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLG  177 (263)
Q Consensus       114 ~g~~evv~~Ll~~~a~-----------p-----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~  177 (263)
                      .|+.++|++|+..++.           |     ..+..+++..|+..+ ..++.+|.+|.||||+|++.       ++.+
T Consensus        78 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g-ad~~~~~~~g~tpLh~A~~~-------~~~~  149 (413)
T PHA02875         78 EGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG-ADPDIPNTDKFSPLHLAVMM-------GDIK  149 (413)
T ss_pred             CCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHc-------CCHH
Confidence            9999999999998874           1     567889999999875 45788899999999999987       6789


Q ss_pred             HHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cc-cCCccceec
Q 037827          178 YWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RV-STTPLTLAT  246 (263)
Q Consensus       178 ~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~  246 (263)
                      +++.|+..|++++..+..+.+|.+.++....             .++..+|+..|+++    +. +.|||++|.
T Consensus       150 ~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~-------------~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~  210 (413)
T PHA02875        150 GIELLIDHKACLDIEDCCGCTPLIIAMAKGD-------------IAICKMLLDSGANIDYFGKNGCVAALCYAI  210 (413)
T ss_pred             HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-------------HHHHHHHHhCCCCCCcCCCCCCchHHHHHH
Confidence            9999999999988877655555544332222             56778899999998    33 468999774

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.86  E-value=3.4e-21  Score=183.75  Aligned_cols=183  Identities=13%  Similarity=0.040  Sum_probs=129.5

Q ss_pred             hhcccChHHHHHHH--HcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC--cHHHHHHHHHcCCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYL--LEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG--KLELISTLIRYEADLPNVRDEEN  104 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa--~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G--~~eiv~~Ll~~ga~l~~~~d~~G  104 (263)
                      ..+..|+||||.|+  ..|+.++++.|++.  +..++.. +..|..+.++|+..|  +.+++++|+++|+++ +.+|..|
T Consensus       101 ~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n~~d~~g  176 (480)
T PHA03100        101 APDNNGITPLLYAISKKSNSYSIVEYLLDN--GANVNIK-NSDGENLLHLYLESNKIDLKILKLLIDKGVDI-NAKNRYG  176 (480)
T ss_pred             CCCCCCCchhhHHHhcccChHHHHHHHHHc--CCCCCcc-CCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc-ccccCCC
Confidence            34556778888888  77888888877776  2333333 445567777888888  788888888888884 8888888


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCC----CCC--------CH----------HHHHHHHHhCCCccccccCCCchHHHH
Q 037827          105 LLPIHRAAKQGQRNVVCYLLEKTRAP----LDG--------SD----------DVAYGLLRKHPKLAWAEIAGTGKILEL  162 (263)
Q Consensus       105 ~TPLh~Aa~~g~~evv~~Ll~~~a~p----~~~--------~~----------~va~~Ll~~~~~~~~~~D~~G~TPLHl  162 (263)
                      +||||+|+..|+.+++++|+++|+++    ..+        .+          .-+..++-..+..++.+|..|.||||+
T Consensus       177 ~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~  256 (480)
T PHA03100        177 YTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHY  256 (480)
T ss_pred             CCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence            88888888888888888888888763    111        00          223344555666677788888888888


Q ss_pred             HhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827          163 LSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF  235 (263)
Q Consensus       163 AA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      |+..       ++.++++.|+..|++++..+..+.++.+.++...             ..++..+|+..|+|.
T Consensus       257 A~~~-------~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~-------------~~~iv~~Ll~~g~~i  309 (480)
T PHA03100        257 AVYN-------NNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNN-------------NKEIFKLLLNNGPSI  309 (480)
T ss_pred             HHHc-------CCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhC-------------CHHHHHHHHhcCCCH
Confidence            8876       5678888888888888877665555544433322             277889999999998

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.86  E-value=6.4e-21  Score=190.15  Aligned_cols=207  Identities=15%  Similarity=0.060  Sum_probs=148.1

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccc------------------------------------------
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACII------------------------------------------   66 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i------------------------------------------   66 (263)
                      .+|..|+||||.|+..|+.++|+.|++.  +..++...                                          
T Consensus       173 ~~d~~G~TpLh~Aa~~G~~~iv~~LL~~--Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~  250 (682)
T PHA02876        173 AKDIYCITPIHYAAERGNAKMVNLLLSY--GADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRN  250 (682)
T ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHC--CCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHc
Confidence            4677899999999999999999999986  22221110                                          


Q ss_pred             -------------------cCCcCHHHHHHHhCCcH-HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHh
Q 037827           67 -------------------VDQSSIFEFIVASTGKL-ELISTLIRYEADLPNVRDEENLLPIHRAAKQG-QRNVVCYLLE  125 (263)
Q Consensus        67 -------------------~~~g~iv~~~AA~~G~~-eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g-~~evv~~Ll~  125 (263)
                                         +..|....++||..|+. +++++|++.|+++ +.+|.+|+||||+|+..| ..+++++|+.
T Consensus       251 ~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~  329 (682)
T PHA02876        251 EDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGYDTENIRTLIM  329 (682)
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCCHHHHHHHHH
Confidence                               11223444578877775 5888888888884 888888888888888888 4888888888


Q ss_pred             CCCCC----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCC
Q 037827          126 KTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPV  189 (263)
Q Consensus       126 ~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v  189 (263)
                      .|+++                ..+..+++..|+.. +..++.+|..|.||||+||.+       ++.++++.|+..|+++
T Consensus       330 ~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~-gadin~~d~~G~TpLh~Aa~~-------~~~~iv~~Ll~~gad~  401 (682)
T PHA02876        330 LGADVNAADRLYITPLHQASTLDRNKDIVITLLEL-GANVNARDYCDKTPIHYAAVR-------NNVVIINTLLDYGADI  401 (682)
T ss_pred             cCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHc-CCCCccCCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCc
Confidence            88762                23455666666655 556788899999999999987       6789999999999999


Q ss_pred             CCCCCCCCCCCCCC-----------------CCh--hhhhhhcccccccc---chhhhHHHHhhhccc----cccCCccc
Q 037827          190 QEEYNPHAHAHSEN-----------------VDG--DLEKQLSETSHSAF---GFELAYLLLHWFVSF----RVSTTPLT  243 (263)
Q Consensus       190 ~~~~~~~~~~~~~~-----------------~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~  243 (263)
                      +..+..+.++.|.+                 ++.  -+..+.+.+.+++.   ..++..+|+..|+|.    ..|.|||+
T Consensus       402 ~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~  481 (682)
T PHA02876        402 EALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLL  481 (682)
T ss_pred             cccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence            88775554444322                 111  13334445555544   246778888888888    77888888


Q ss_pred             eec
Q 037827          244 LAT  246 (263)
Q Consensus       244 ~~~  246 (263)
                      +|.
T Consensus       482 ~a~  484 (682)
T PHA02876        482 IAL  484 (682)
T ss_pred             HHH
Confidence            885

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.83  E-value=1.8e-20  Score=178.72  Aligned_cols=160  Identities=19%  Similarity=0.144  Sum_probs=129.8

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..|.+|+++||+||.+++++++++||++  ++.+++.-..-+....||||++|+..+|.+|+++||| ++.+|.+|.|||
T Consensus        73 ~~D~~g~tlLHWAAiNNrl~v~r~li~~--gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAd-pt~~D~~G~~~l  149 (600)
T KOG0509|consen   73 NPDREGVTLLHWAAINNRLDVARYLISH--GADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGAD-PTLKDKQGLTPL  149 (600)
T ss_pred             CCCcCCccceeHHHHcCcHHHHHHHHHc--CCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCC-CceecCCCCcHH
Confidence            4566999999999999999999999998  5677666323346777899999999999999999999 599999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+||+.||+-.|-||+.+++++               -.++...+..|++-++......|..|.||||.|+..       
T Consensus       150 Hla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~-------  222 (600)
T KOG0509|consen  150 HLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVG-------  222 (600)
T ss_pred             HHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhc-------
Confidence            9999999999999999999862               233444456666665554444459999999999987       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCCCC
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPHAH  198 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~~~  198 (263)
                      +++..+..+...|++.++.++.+..
T Consensus       223 gN~~~v~Ll~~g~~~~d~~~~~g~t  247 (600)
T KOG0509|consen  223 GNLTAVKLLLEGGADLDKTNTNGKT  247 (600)
T ss_pred             CCcceEehhhhcCCcccccccCCCC
Confidence            6777787666677888888765533

>PHA02798 ankyrin-like protein; Provisional

Probab=99.80  E-value=3.7e-19  Score=171.18  Aligned_cols=206  Identities=15%  Similarity=0.095  Sum_probs=133.2

Q ss_pred             cChHHHHHHH--HcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHh-----CCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           33 ANYKQVTRYL--LEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVAS-----TGKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        33 ~~~t~Lh~Aa--~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~-----~G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      .++++++.+.  ..++.++|+.|++.  +..++.. +..|.+..++|+.     .+..+++++|+++|+++ +.+|..|+
T Consensus        35 ~~~~~~~~yl~~~~~~~~iv~~Ll~~--Gadvn~~-d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gadi-N~~d~~G~  110 (489)
T PHA02798         35 NEYSIFQKYLQRDSPSTDIVKLFINL--GANVNGL-DNEYSTPLCTILSNIKDYKHMLDIVKILIENGADI-NKKNSDGE  110 (489)
T ss_pred             ccchHHHHHHhCCCCCHHHHHHHHHC--CCCCCCC-CCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCC-CCCCCCcC
Confidence            3556555333  34477888888876  4555554 4555555555543     36778888888888884 88888888


Q ss_pred             cHHHHHHHcC---CHHHHHHHHhCCCCC---------------CCCC---HHHHHHHHHhCCCccccc-cCCCchHHHHH
Q 037827          106 LPIHRAAKQG---QRNVVCYLLEKTRAP---------------LDGS---DDVAYGLLRKHPKLAWAE-IAGTGKILELL  163 (263)
Q Consensus       106 TPLh~Aa~~g---~~evv~~Ll~~~a~p---------------~~~~---~~va~~Ll~~~~~~~~~~-D~~G~TPLHlA  163 (263)
                      ||||+|+.+|   +.+++++|+++|+++               ..+.   .+++..|++.+.+ ++.+ +..|.||||.+
T Consensus       111 TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-in~~~~~~~~t~Lh~~  189 (489)
T PHA02798        111 TPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-INTHNNKEKYDTLHCY  189 (489)
T ss_pred             cHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC-cccccCcCCCcHHHHH
Confidence            8888888765   678888888888762               2333   6777777776433 4544 45788888877


Q ss_pred             hcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCC------------------------CCCChhhhhhhccccccc
Q 037827          164 SKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHS------------------------ENVDGDLEKQLSETSHSA  219 (263)
Q Consensus       164 A~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~  219 (263)
                      +++....   ++.++++.|+..|++++..+..+..+..                        ..++..+..+.+.+.+|+
T Consensus       190 ~~~~~~~---~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~  266 (489)
T PHA02798        190 FKYNIDR---IDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSV  266 (489)
T ss_pred             HHhcccc---CCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHH
Confidence            6542111   4568888888888888776533321110                        112222333444455554


Q ss_pred             cc--hhhhHHHHhhhccc----cccCCccceec
Q 037827          220 FG--FELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       220 ~~--~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ..  .++..+|+..|||.    +.|.|||++|.
T Consensus       267 ~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~  299 (489)
T PHA02798        267 SHNNRKIFEYLLQLGGDINIITELGNTCLFTAF  299 (489)
T ss_pred             HcCcHHHHHHHHHcCCcccccCCCCCcHHHHHH
Confidence            33  56778888899999    88999999994

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.80  E-value=1.4e-18  Score=144.54  Aligned_cols=146  Identities=14%  Similarity=-0.014  Sum_probs=116.5

Q ss_pred             CCchhhhhhcccChHHHHHHHHcCCHHHHH----HHHhccCCCcccccccCCcCHHHHHHHhCCcHHH---HHHHHHcCC
Q 037827           22 NTKDEKIIKDIANYKQVTRYLLEDDWKGLE----DYIMSKTPNALACIIVDQSSIFEFIVASTGKLEL---ISTLIRYEA   94 (263)
Q Consensus        22 ~~~~~~~~~~~~~~t~Lh~Aa~~G~~e~v~----~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~ei---v~~Ll~~ga   94 (263)
                      +...+....+.++.++||.||+.|+.+.++    .|++.  +..++.. +..|....++||..|+.++   +++|+++|+
T Consensus         8 ~~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~--g~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Ga   84 (166)
T PHA02743          8 GNNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGD--GHLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVNMGA   84 (166)
T ss_pred             ccchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhc--chhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHHcCC
Confidence            344455566777888999999999995444    44444  4444433 5667888999999998664   899999999


Q ss_pred             CCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827           95 DLPNVRD-EENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus        95 ~l~~~~d-~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      ++ +.+| ..|+||||+|+..|+.+++++|+                  ...+..++.+|.+|.||||+|+.+       
T Consensus        85 di-n~~d~~~g~TpLh~A~~~g~~~iv~~Ll------------------~~~gad~~~~d~~g~tpL~~A~~~-------  138 (166)
T PHA02743         85 DI-NARELGTGNTLLHIAASTKNYELAEWLC------------------RQLGVNLGAINYQHETAYHIAYKM-------  138 (166)
T ss_pred             CC-CCCCCCCCCcHHHHHHHhCCHHHHHHHH------------------hccCCCccCcCCCCCCHHHHHHHc-------
Confidence            95 9998 58999999999999999999995                  323445677899999999999987       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCC
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~  196 (263)
                      ++.++++.|+..|++++..++.+
T Consensus       139 ~~~~iv~~Ll~~ga~~~~~~~~~  161 (166)
T PHA02743        139 RDRRMMEILRANGAVCDDPLSIG  161 (166)
T ss_pred             CCHHHHHHHHHcCCCCCCcccCC
Confidence            67799999999999998887543

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.80  E-value=6.1e-19  Score=169.88  Aligned_cols=206  Identities=16%  Similarity=0.072  Sum_probs=151.7

Q ss_pred             ccChHHHHHHHHc--CCHHHHHHHHhccCCCcccccccCCcCHHHHHHHh------CCcHHHHHHHHHcCCCCCCCCCCC
Q 037827           32 IANYKQVTRYLLE--DDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVAS------TGKLELISTLIRYEADLPNVRDEE  103 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~--G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~------~G~~eiv~~Ll~~ga~l~~~~d~~  103 (263)
                      ..|.+|||.++..  |+.++|+.||+.  +..++.. + .+....+.|+.      .|+.+++++|+++|+++ +.+|..
T Consensus        33 ~~g~t~l~~~~~~~~~~~~iv~~Ll~~--GAdvn~~-~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~  107 (494)
T PHA02989         33 YRGNSILLLYLKRKDVKIKIVKLLIDN--GADVNYK-G-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADI-NLKTFN  107 (494)
T ss_pred             cCCCCHHHHHHhcCCCChHHHHHHHHc--CCCccCC-C-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCC-CCCCCC
Confidence            4578888776554  368999999987  4556554 2 33455556654      45678999999999995 999999


Q ss_pred             CCcHHHHHHHc---CCHHHHHHHHhCCCCC------------------CCCCHHHHHHHHHhCCCcccc-ccCCCchHHH
Q 037827          104 NLLPIHRAAKQ---GQRNVVCYLLEKTRAP------------------LDGSDDVAYGLLRKHPKLAWA-EIAGTGKILE  161 (263)
Q Consensus       104 G~TPLh~Aa~~---g~~evv~~Ll~~~a~p------------------~~~~~~va~~Ll~~~~~~~~~-~D~~G~TPLH  161 (263)
                      |+||||+|+..   |+.++|++|+++|+++                  ..++.+++..|++.+.+ ++. .|..|.||||
T Consensus       108 g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gad-i~~~~~~~g~tpL~  186 (494)
T PHA02989        108 GVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVN-LFEKTSLYGLTPMN  186 (494)
T ss_pred             CCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCC-ccccccccCCChHH
Confidence            99999988765   6799999999999863                  23467888888887654 455 6889999999


Q ss_pred             HHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCC-----------------------CCCChhhhhhhcccccc
Q 037827          162 LLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHS-----------------------ENVDGDLEKQLSETSHS  218 (263)
Q Consensus       162 lAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~  218 (263)
                      +|++...   ..++.++++.|+..|++++..+..+..+.+                       ..++..+..+.+.+.++
T Consensus       187 ~a~~~~~---~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~A  263 (494)
T PHA02989        187 IYLRNDI---DVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLIS  263 (494)
T ss_pred             HHHhccc---ccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHH
Confidence            9987642   247789999999999999988743322221                       11222233455555555


Q ss_pred             ccc--hhhhHHHHhhhccc----cccCCccceec
Q 037827          219 AFG--FELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       219 ~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +..  .++..+|+..|+|.    +.|.|||++|.
T Consensus       264 a~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~  297 (494)
T PHA02989        264 AKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAI  297 (494)
T ss_pred             HHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence            543  56778899999999    88999999994

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.80  E-value=2.9e-20  Score=172.16  Aligned_cols=158  Identities=17%  Similarity=0.098  Sum_probs=116.2

Q ss_pred             hhhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCccccc--ccCCc-----CHHHHHHHhCCcHHHHHHHHHcCCCCC
Q 037827           25 DEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACI--IVDQS-----SIFEFIVASTGKLELISTLIRYEADLP   97 (263)
Q Consensus        25 ~~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~--i~~~g-----~iv~~~AA~~G~~eiv~~Ll~~ga~l~   97 (263)
                      .+.+....+|.|||..||++|+.++|++|+++ ........  ..-+|     .....-|+..||.++|+.|+++|+++ 
T Consensus        33 ~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~-~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~V-  110 (615)
T KOG0508|consen   33 ISLIGEVQNGGTPLLIAARNGHADVVEYLLEH-CRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASV-  110 (615)
T ss_pred             HHHhccccCCCCceeeehhcCcHHHHHHHHHH-hcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcc-
Confidence            34556777899999999999999999999997 33322111  11112     12222567899999999999999995 


Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHH
Q 037827           98 NVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILEL  162 (263)
Q Consensus        98 ~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHl  162 (263)
                      |.......|||--||.-||.++|+||+++++||               -.|+.+|+.+|++.+ ..++.++..|.|+||.
T Consensus       111 N~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~g-ADvn~ks~kGNTALH~  189 (615)
T KOG0508|consen  111 NDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQG-ADVNAKSYKGNTALHD  189 (615)
T ss_pred             ccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhC-CCcchhcccCchHHHh
Confidence            999999999999999999999999998888763               456666777666663 3456666677777776


Q ss_pred             HhcCCCCCcCCcchHHHHHHcccCCCCCCC
Q 037827          163 LSKRPKAFASGIRLGYWKGLLYQWIPVQEE  192 (263)
Q Consensus       163 AA~~~~~f~s~~~~~~~~~li~~~~~v~~~  192 (263)
                      +|..       |++++++.|+.+|+-++..
T Consensus       190 caEs-------G~vdivq~Ll~~ga~i~~d  212 (615)
T KOG0508|consen  190 CAES-------GSVDIVQLLLKHGAKIDVD  212 (615)
T ss_pred             hhhc-------ccHHHHHHHHhCCceeeec
Confidence            6664       5567777666666655554

>PHA03095 ankyrin-like protein; Provisional

Probab=99.79  E-value=1e-18  Score=166.27  Aligned_cols=198  Identities=16%  Similarity=0.046  Sum_probs=149.4

Q ss_pred             HHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC---cHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           39 TRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG---KLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        39 h~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G---~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      ..++..++.++|+.|++.  +..++.. +..|....++|+..|   +.+++++|+++|+++ +.+|..|+||||+|+..|
T Consensus        19 ~~~~~~~~~~~v~~Ll~~--ga~vn~~-~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadi-n~~~~~g~TpLh~A~~~~   94 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAA--GADVNFR-GEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADV-NAPERCGFTPLHLYLYNA   94 (471)
T ss_pred             HHcCCCCCHHHHHHHHHc--CCCcccC-CCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcC
Confidence            567888999999999987  4555544 556688889999998   999999999999995 999999999999999999


Q ss_pred             -CHHHHHHHHhCCCCC-----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchH
Q 037827          116 -QRNVVCYLLEKTRAP-----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLG  177 (263)
Q Consensus       116 -~~evv~~Ll~~~a~p-----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~  177 (263)
                       +.+++++|+++|+++                 ..+..+++..|+..+ ..++.+|..|.||||+|+..+     ....+
T Consensus        95 ~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~g-ad~~~~d~~g~tpL~~a~~~~-----~~~~~  168 (471)
T PHA03095         95 TTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKG-ADVNALDLYGMTPLAVLLKSR-----NANVE  168 (471)
T ss_pred             CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC-----CCCHH
Confidence             599999999999962                 234677888888875 457889999999999998764     35789


Q ss_pred             HHHHHcccCCCCCCCCCCCCCCCCCCC------------------Chh--hhhhhccccccccchh----hhHHHHhhhc
Q 037827          178 YWKGLLYQWIPVQEEYNPHAHAHSENV------------------DGD--LEKQLSETSHSAFGFE----LAYLLLHWFV  233 (263)
Q Consensus       178 ~~~~li~~~~~v~~~~~~~~~~~~~~~------------------~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~  233 (263)
                      +++.|+..|++++..+..+.++.|..+                  +.+  +..+-+.+-+++..++    +...++..|+
T Consensus       169 iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~  248 (471)
T PHA03095        169 LLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGI  248 (471)
T ss_pred             HHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCC
Confidence            999999999998887654444433211                  111  1112222233333332    3445677788


Q ss_pred             cc----cccCCccceec
Q 037827          234 SF----RVSTTPLTLAT  246 (263)
Q Consensus       234 ~~----~~~~~~~~~~~  246 (263)
                      |+    +.|.||||+|.
T Consensus       249 din~~d~~g~TpLh~A~  265 (471)
T PHA03095        249 SINARNRYGQTPLHYAA  265 (471)
T ss_pred             CCCCcCCCCCCHHHHHH
Confidence            87    67889999885

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.79  E-value=5.3e-19  Score=172.24  Aligned_cols=209  Identities=17%  Similarity=0.090  Sum_probs=158.0

Q ss_pred             hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827           27 KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL  106 (263)
Q Consensus        27 ~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T  106 (263)
                      ...+|..+.+|||+|+....++.++.|++.  +....-. +..+....++|+..|+.+..+.|+++|+| ++..|..|+|
T Consensus        81 ~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~--gad~~~~-n~~~~aplh~A~~~~~~s~L~~Ll~~~~d-vnl~de~~~T  156 (929)
T KOG0510|consen   81 SYAKDSADNTPLHAAVEYNQGDKIQVLLSY--GADTPLR-NLNKNAPLHLAADSGNYSCLKLLLDYGAD-VNLEDENGFT  156 (929)
T ss_pred             hhhhhcccCchhHHHhhcchHHHHHHHHhc--CCCCChh-hhhccCchhhccccchHHHHHHHHHhcCC-ccccccCCCc
Confidence            456888899999999999999999999987  3333222 33344556799999999999999999999 4999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCC-----------------------------------------------------CCC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTRAP-----------------------------------------------------LDG  133 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a~p-----------------------------------------------------~~~  133 (263)
                      |||+||..++.|..+.|+..+++|                                                     ..|
T Consensus       157 pLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g  236 (929)
T KOG0510|consen  157 PLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGG  236 (929)
T ss_pred             hhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcC
Confidence            999999999999889999999973                                                     455


Q ss_pred             CHHHHHHHHHhCCC--------------ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCC
Q 037827          134 SDDVAYGLLRKHPK--------------LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHA  199 (263)
Q Consensus       134 ~~~va~~Ll~~~~~--------------~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~  199 (263)
                      +.+....+++.+..              +++.+|.+|.||||+||+.       |+.+-++.|+..|++++..+...++|
T Consensus       237 ~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~-------G~~~svd~Ll~~Ga~I~~kn~d~~sp  309 (929)
T KOG0510|consen  237 DIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQ-------GGPESVDNLLGFGASINSKNKDEESP  309 (929)
T ss_pred             CHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHc-------CChhHHHHHHHcCCcccccCCCCCCc
Confidence            66666666665433              2334489999999999997       77899999999999999987555555


Q ss_pred             CCCCCCh-------hh-------------hh--hhccccccccchhhhHHHHhhhcccc-------ccCCccceec
Q 037827          200 HSENVDG-------DL-------------EK--QLSETSHSAFGFELAYLLLHWFVSFR-------VSTTPLTLAT  246 (263)
Q Consensus       200 ~~~~~~~-------~~-------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  246 (263)
                      .|-++..       .+             +.  -..|.+-+-.+-.+-.+||.|||.|-       .+.||||+|+
T Consensus       310 LH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa  385 (929)
T KOG0510|consen  310 LHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAA  385 (929)
T ss_pred             hHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHH
Confidence            5542221       11             01  11233333444556678899999992       6899999996

>PHA02917 ankyrin-like protein; Provisional

Probab=99.79  E-value=1.1e-18  Score=173.39  Aligned_cols=201  Identities=11%  Similarity=-0.037  Sum_probs=138.3

Q ss_pred             hhcccChHHHHHHH--HcCCHHHHHHHHhccCCCccccccc--CCc-----------CHHHHHHHh-----------CCc
Q 037827           29 IKDIANYKQVTRYL--LEDDWKGLEDYIMSKTPNALACIIV--DQS-----------SIFEFIVAS-----------TGK   82 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa--~~G~~e~v~~Ll~~~~~~~~~~~i~--~~g-----------~iv~~~AA~-----------~G~   82 (263)
                      .+|..|+||||.|+  ..|+.++|+.||++  +..++....  ..|           ..+.++|+.           .|+
T Consensus       131 ~~d~~g~T~L~~~~a~~~~~~eivklLi~~--Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~  208 (661)
T PHA02917        131 VKCENHRSVIENYVMTDDPVPEIIDLFIEN--GCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVR  208 (661)
T ss_pred             ccCCCCccHHHHHHHccCCCHHHHHHHHHc--CCCccccccccccccccccccccccccHHHHHHhhcccccccccccCc
Confidence            57889999999654  57899999999997  444443211  112           367778875           568


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHhCCCC---------C---------C-----------
Q 037827           83 LELISTLIRYEADLPNVRDEENLLPIHRAAKQGQR--NVVCYLLEKTRA---------P---------L-----------  131 (263)
Q Consensus        83 ~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~--evv~~Ll~~~a~---------p---------~-----------  131 (263)
                      .++|++|+++|+++ +.+|.+|+||||+|+.+|+.  ++|++|+. |++         +         .           
T Consensus       209 ~eiv~~Li~~Gadv-n~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~  286 (661)
T PHA02917        209 PEVVKCLINHGIKP-SSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKD  286 (661)
T ss_pred             HHHHHHHHHCCCCc-ccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhcccccc
Confidence            99999999999995 99999999999999999984  67777764 321         0         0           


Q ss_pred             --------------------------CCC------------------------------HHHHHHHHHhC----------
Q 037827          132 --------------------------DGS------------------------------DDVAYGLLRKH----------  145 (263)
Q Consensus       132 --------------------------~~~------------------------------~~va~~Ll~~~----------  145 (263)
                                                .+.                              .+++..|+..+          
T Consensus       287 v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g  366 (661)
T PHA02917        287 VDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHG  366 (661)
T ss_pred             chHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccc
Confidence                                      000                              11233333322          


Q ss_pred             -------------------CCccccccCCCchHHHHHhcCCCC----------------CcCCcchHHHHHHcccCCCCC
Q 037827          146 -------------------PKLAWAEIAGTGKILELLSKRPKA----------------FASGIRLGYWKGLLYQWIPVQ  190 (263)
Q Consensus       146 -------------------~~~~~~~D~~G~TPLHlAA~~~~~----------------f~s~~~~~~~~~li~~~~~v~  190 (263)
                                         ++.++.+|.+|.||||.|++....                ++-.+.+++++.|+.+|++++
T Consensus       367 ~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN  446 (661)
T PHA02917        367 YFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDIN  446 (661)
T ss_pred             cchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCC
Confidence                               222233356799999999854321                111125778899999999999


Q ss_pred             CCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          191 EEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ..+.-+.+|.+-++.-..             .++..+|+..|+|+    +.+.|||++|.
T Consensus       447 ~kd~~G~TpLh~Aa~~~~-------------~~~v~~Ll~~GAdin~~d~~G~T~L~~A~  493 (661)
T PHA02917        447 MIDKRGETLLHKAVRYNK-------------QSLVSLLLESGSDVNIRSNNGYTCIAIAI  493 (661)
T ss_pred             CCCCCCcCHHHHHHHcCC-------------HHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence            987655555543332222             45677899999999    88999999996

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.79  E-value=1.3e-18  Score=173.49  Aligned_cols=194  Identities=13%  Similarity=0.053  Sum_probs=143.7

Q ss_pred             HcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHh--CCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCC--HH
Q 037827           43 LEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVAS--TGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQ--RN  118 (263)
Q Consensus        43 ~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~--~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~--~e  118 (263)
                      +.++.++|++|++. ....++...+..|....++|+.  .|+.+++++|+++|+++ +.+|..|+||||+|+..|+  .+
T Consensus       151 ~~v~leiVk~LLe~-G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADV-N~kD~~G~TPLH~Aa~~g~~~~e  228 (764)
T PHA02716        151 RGIDLDLIKYMVDV-GIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNV-NLQNNHLITPLHTYLITGNVCAS  228 (764)
T ss_pred             cCCCHHHHHHHHHC-CCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCCCHH
Confidence            46899999999998 3245655535567777777653  57899999999999995 9999999999999999996  59


Q ss_pred             HHHHHHhCCCCC----C------------------------------------------------CCCHHHHHHHHHhCC
Q 037827          119 VVCYLLEKTRAP----L------------------------------------------------DGSDDVAYGLLRKHP  146 (263)
Q Consensus       119 vv~~Ll~~~a~p----~------------------------------------------------~~~~~va~~Ll~~~~  146 (263)
                      +|++|+++|+++    .                                                .+..+++..|++. +
T Consensus       229 IVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~-G  307 (764)
T PHA02716        229 VIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQP-G  307 (764)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhC-C
Confidence            999999999972    0                                                0234556667765 4


Q ss_pred             CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChh-hhhhhccccccccchhhh
Q 037827          147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGD-LEKQLSETSHSAFGFELA  225 (263)
Q Consensus       147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  225 (263)
                      ..++.+|.+|.||||+|+...     .++.++++.|+..|++++..+..+.+|.|.++..- -.+.+..........++.
T Consensus       308 AdIN~kD~~G~TPLH~Aaa~~-----~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVV  382 (764)
T PHA02716        308 VKLHYKDSAGRTCLHQYILRH-----NISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVI  382 (764)
T ss_pred             CceeccCCCCCCHHHHHHHHh-----CCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHH
Confidence            457889999999999876532     24679999999999999999877776666432100 000000000112346889


Q ss_pred             HHHHhhhccc----cccCCccce
Q 037827          226 YLLLHWFVSF----RVSTTPLTL  244 (263)
Q Consensus       226 ~~~~~~~~~~----~~~~~~~~~  244 (263)
                      .+|+..|||.    +.|+|||+.
T Consensus       383 klLL~~GADIn~kn~~G~TPLh~  405 (764)
T PHA02716        383 QCLISLGADITAVNCLGYTPLTS  405 (764)
T ss_pred             HHHHHCCCCCCCcCCCCCChHHH
Confidence            9999999999    889999993

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.79  E-value=2.3e-18  Score=175.35  Aligned_cols=154  Identities=12%  Similarity=0.056  Sum_probs=134.7

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR  110 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~  110 (263)
                      +.+..++|+.||..|+.+.++.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|.+|+||||+
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~--G~d~n~~-d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~  597 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKA--KLDPDIG-DSKGRTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWN  597 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHH
Confidence            33567899999999999999999987  3445444 667788999999999999999999999995 9999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCC--C-----------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchH
Q 037827          111 AAKQGQRNVVCYLLEKTRA--P-----------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLG  177 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~a~--p-----------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~  177 (263)
                      |+..||.+++++|+..++.  +           ..++.+++..|++.+ ..++.+|.+|.||||+|++.       ++.+
T Consensus       598 A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~G-adin~~d~~G~TpLh~A~~~-------g~~~  669 (823)
T PLN03192        598 AISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQG-LNVDSEDHQGATALQVAMAE-------DHVD  669 (823)
T ss_pred             HHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHC-------CcHH
Confidence            9999999999999987764  1           678899999999875 45789999999999999987       7889


Q ss_pred             HHHHHcccCCCCCCCCCCC
Q 037827          178 YWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       178 ~~~~li~~~~~v~~~~~~~  196 (263)
                      +++.|+.+|++++..+..+
T Consensus       670 iv~~Ll~~GAdv~~~~~~g  688 (823)
T PLN03192        670 MVRLLIMNGADVDKANTDD  688 (823)
T ss_pred             HHHHHHHcCCCCCCCCCCC
Confidence            9999999999999886543

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.79  E-value=1.6e-18  Score=166.06  Aligned_cols=124  Identities=21%  Similarity=0.107  Sum_probs=104.6

Q ss_pred             cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC----------------CCC
Q 037827           70 SSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP----------------LDG  133 (263)
Q Consensus        70 g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p----------------~~~  133 (263)
                      |....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+..|+++                ..+
T Consensus       168 g~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~  246 (477)
T PHA02878        168 GNTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCK  246 (477)
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcC
Confidence            455666999999999999999999995 999999999999999999999999999999872                235


Q ss_pred             CHHHHHHHHHhCCCccccccC-CCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCC
Q 037827          134 SDDVAYGLLRKHPKLAWAEIA-GTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENV  204 (263)
Q Consensus       134 ~~~va~~Ll~~~~~~~~~~D~-~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~  204 (263)
                      ..+++..|+..+. .++.++. .|.||||+|+.         ..++++.|+..|++++..+..+.+|.+.++
T Consensus       247 ~~~iv~~Ll~~ga-dvn~~~~~~g~TpLh~A~~---------~~~~v~~Ll~~gadin~~d~~g~TpL~~A~  308 (477)
T PHA02878        247 DYDILKLLLEHGV-DVNAKSYILGLTALHSSIK---------SERKLKLLLEYGADINSLNSYKLTPLSSAV  308 (477)
T ss_pred             CHHHHHHHHHcCC-CCCccCCCCCCCHHHHHcc---------CHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            7888888888754 4566664 89999999953         348899999999999999877766666554

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.78  E-value=9.6e-19  Score=170.47  Aligned_cols=143  Identities=16%  Similarity=0.131  Sum_probs=123.0

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHH-cCCCCCCCCCCCCCc
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIR-YEADLPNVRDEENLL  106 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~-~ga~l~~~~d~~G~T  106 (263)
                      +.+|.+|+||||+||+.|+.+.+..|+..  +..++.+ +.++....|+||.+|+.+.|+.|++ .|.-+++..|..|+|
T Consensus       267 ~~~d~dg~tpLH~a~r~G~~~svd~Ll~~--Ga~I~~k-n~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~t  343 (929)
T KOG0510|consen  267 NDEDNDGCTPLHYAARQGGPESVDNLLGF--GASINSK-NKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMT  343 (929)
T ss_pred             hcccccCCchHHHHHHcCChhHHHHHHHc--CCccccc-CCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCC
Confidence            56899999999999999999999999987  5666666 5666888899999999999999999 777777999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~  186 (263)
                      |||+|+++||..+|++|+..|+...+            ..    ..|.+|.||||+||+.       |+...++.||.+|
T Consensus       344 pLHlaa~~gH~~v~qlLl~~GA~~~~------------~~----e~D~dg~TaLH~Aa~~-------g~~~av~~Li~~G  400 (929)
T KOG0510|consen  344 PLHLAAKSGHDRVVQLLLNKGALFLN------------MS----EADSDGNTALHLAAKY-------GNTSAVQKLISHG  400 (929)
T ss_pred             chhhhhhcCHHHHHHHHHhcChhhhc------------cc----ccccCCchhhhHHHHh-------ccHHHHHHHHHcC
Confidence            99999999999999999988774111            01    3499999999999998       7789999999999


Q ss_pred             CCCCCCCCCC
Q 037827          187 IPVQEEYNPH  196 (263)
Q Consensus       187 ~~v~~~~~~~  196 (263)
                      ++|+..+..+
T Consensus       401 a~I~~~n~~g  410 (929)
T KOG0510|consen  401 ADIGVKNKKG  410 (929)
T ss_pred             Cceeeccccc
Confidence            9997765443

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.78  E-value=3.1e-18  Score=165.01  Aligned_cols=164  Identities=12%  Similarity=0.032  Sum_probs=127.6

Q ss_pred             hhcccChHHHHHHHHc---CCHHHHHHHHhccCCCcc-cccccCCcCHHHHHHHh--CCcHHHHHHHHHcCCCCCCC-CC
Q 037827           29 IKDIANYKQVTRYLLE---DDWKGLEDYIMSKTPNAL-ACIIVDQSSIFEFIVAS--TGKLELISTLIRYEADLPNV-RD  101 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~---G~~e~v~~Ll~~~~~~~~-~~~i~~~g~iv~~~AA~--~G~~eiv~~Ll~~ga~l~~~-~d  101 (263)
                      .++.+|+||||.|+..   |+.++++.|++.  +..+ +.. +..|....++|+.  .++.++|++|+++|+++ +. .|
T Consensus       103 ~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~--Gadin~~~-d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi-~~~~~  178 (494)
T PHA02989        103 LKTFNGVSPIVCFIYNSNINNCDMLRFLLSK--GINVNDVK-NSRGYNLLHMYLESFSVKKDVIKILLSFGVNL-FEKTS  178 (494)
T ss_pred             CCCCCCCcHHHHHHHhcccCcHHHHHHHHHC--CCCccccc-CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc-ccccc
Confidence            5677899999988765   689999999987  4455 333 5567777777654  57899999999999995 77 68


Q ss_pred             CCCCcHHHHHHHcC----CHHHHHHHHhCCCCC---C------------------CCCHHHHHHHHHhCCCccccccCCC
Q 037827          102 EENLLPIHRAAKQG----QRNVVCYLLEKTRAP---L------------------DGSDDVAYGLLRKHPKLAWAEIAGT  156 (263)
Q Consensus       102 ~~G~TPLh~Aa~~g----~~evv~~Ll~~~a~p---~------------------~~~~~va~~Ll~~~~~~~~~~D~~G  156 (263)
                      ..|.||||+|+..+    +.++|++|+++|++.   .                  ....+++..|+ .+ ..++.+|.+|
T Consensus       179 ~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~-~~-advn~~d~~G  256 (494)
T PHA02989        179 LYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFIL-KY-IKINKKDKKG  256 (494)
T ss_pred             ccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHH-hC-CCCCCCCCCC
Confidence            89999999998765    899999999999972   1                  11223344343 33 5678899999


Q ss_pred             chHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCC
Q 037827          157 GKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVD  205 (263)
Q Consensus       157 ~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~  205 (263)
                      .||||+||+.       ++.++++.|+..|++++..+..+.++.+.++.
T Consensus       257 ~TpL~~Aa~~-------~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~  298 (494)
T PHA02989        257 FNPLLISAKV-------DNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIK  298 (494)
T ss_pred             CCHHHHHHHh-------cCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            9999999987       67899999999999999998777666665443

>PHA02741 hypothetical protein; Provisional

Probab=99.77  E-value=3.4e-18  Score=142.46  Aligned_cols=135  Identities=16%  Similarity=0.072  Sum_probs=110.1

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhcc----CCCcccccccCCcCHHHHHHHhCCc----HHHHHHHHHcCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSK----TPNALACIIVDQSSIFEFIVASTGK----LELISTLIRYEADLPNVR  100 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~----~~~~~~~~i~~~g~iv~~~AA~~G~----~eiv~~Ll~~ga~l~~~~  100 (263)
                      .++..|.||||.|++.|+.++++.|+...    .+..++.. +..|....++|+..|+    .+++++|++.|+++ +.+
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi-n~~   93 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI-NAQ   93 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC-CCC
Confidence            46778999999999999999999886420    12344444 5567888899999999    58999999999995 999


Q ss_pred             CC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHH
Q 037827          101 DE-ENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYW  179 (263)
Q Consensus       101 d~-~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~  179 (263)
                      |. .|+||||+|+..++.+++++|+                  ...+..++.+|.+|.||||+|+..       +..+++
T Consensus        94 ~~~~g~TpLh~A~~~~~~~iv~~Ll------------------~~~g~~~~~~n~~g~tpL~~A~~~-------~~~~iv  148 (169)
T PHA02741         94 EMLEGDTALHLAAHRRDHDLAEWLC------------------CQPGIDLHFCNADNKSPFELAIDN-------EDVAMM  148 (169)
T ss_pred             CcCCCCCHHHHHHHcCCHHHHHHHH------------------hCCCCCCCcCCCCCCCHHHHHHHC-------CCHHHH
Confidence            85 9999999999999999999995                  333345677899999999999987       566888


Q ss_pred             HHHcccCCCCC
Q 037827          180 KGLLYQWIPVQ  190 (263)
Q Consensus       180 ~~li~~~~~v~  190 (263)
                      +.|+..++...
T Consensus       149 ~~L~~~~~~~~  159 (169)
T PHA02741        149 QILREIVATSR  159 (169)
T ss_pred             HHHHHHHHHhc
Confidence            88887765433

>PHA02798 ankyrin-like protein; Provisional

Probab=99.77  E-value=4.4e-18  Score=163.73  Aligned_cols=167  Identities=11%  Similarity=-0.048  Sum_probs=107.8

Q ss_pred             hhcccChHHHHHHHHc-----CCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC---cHHHHHHHHHcCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLE-----DDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG---KLELISTLIRYEADLPNVR  100 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~-----G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G---~~eiv~~Ll~~ga~l~~~~  100 (263)
                      ..+..|.||||.|+..     +..++++.|++.  +..++.. +..|.+..++|+..|   +.+++++|+++|+++ +.+
T Consensus        66 ~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~--GadiN~~-d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~  141 (489)
T PHA02798         66 GLDNEYSTPLCTILSNIKDYKHMLDIVKILIEN--GADINKK-NSDGETPLYCLLSNGYINNLEILLFMIENGADT-TLL  141 (489)
T ss_pred             CCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHC--CCCCCCC-CCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-ccc
Confidence            4456666666666543     556666666665  3444443 444556666666554   556666666666663 666


Q ss_pred             CCCCCcHHHHHHHcCC---HHHHHHHHhCCCCC--------------------CCCCHHHHHHHHHhCC-----------
Q 037827          101 DEENLLPIHRAAKQGQ---RNVVCYLLEKTRAP--------------------LDGSDDVAYGLLRKHP-----------  146 (263)
Q Consensus       101 d~~G~TPLh~Aa~~g~---~evv~~Ll~~~a~p--------------------~~~~~~va~~Ll~~~~-----------  146 (263)
                      |..|+||||+|++.|+   .+++++|+++|+++                    ..+..+++..|+..+.           
T Consensus       142 d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~  221 (489)
T PHA02798        142 DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKK  221 (489)
T ss_pred             CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccc
Confidence            6666666666666665   66666666666541                    0112344444443321           


Q ss_pred             ---------------------------CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCC
Q 037827          147 ---------------------------KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHA  199 (263)
Q Consensus       147 ---------------------------~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~  199 (263)
                                                 ..++.+|..|.||||+|+..       ++.++++.|+..|++++..+..+.++
T Consensus       222 ~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~-------~~~~~v~~LL~~GAdin~~d~~G~Tp  294 (489)
T PHA02798        222 KFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSH-------NNRKIFEYLLQLGGDINIITELGNTC  294 (489)
T ss_pred             hHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHc-------CcHHHHHHHHHcCCcccccCCCCCcH
Confidence                                       24567889999999999987       67799999999999999998777777


Q ss_pred             CCCCCCh
Q 037827          200 HSENVDG  206 (263)
Q Consensus       200 ~~~~~~~  206 (263)
                      .+.++..
T Consensus       295 L~~A~~~  301 (489)
T PHA02798        295 LFTAFEN  301 (489)
T ss_pred             HHHHHHc
Confidence            6655443

>PHA02730 ankyrin-like protein; Provisional

Probab=99.77  E-value=6.3e-18  Score=166.17  Aligned_cols=209  Identities=12%  Similarity=0.025  Sum_probs=123.3

Q ss_pred             hhcccChHHHHHHHHcC---CHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC--cHHHHHHHHHcCCCC-CCCCCC
Q 037827           29 IKDIANYKQVTRYLLED---DWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG--KLELISTLIRYEADL-PNVRDE  102 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G---~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G--~~eiv~~Ll~~ga~l-~~~~d~  102 (263)
                      .+|.+|.||||+|+..|   +.++|+.||++  ++.++++ +..|.+..++||..|  +.|+|++|++.|++. ++..|.
T Consensus        36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~--GAdin~k-D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~  112 (672)
T PHA02730         36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSR--GVERLCR-NNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSN  112 (672)
T ss_pred             hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhC--CCCCccc-CCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccc
Confidence            34556677777777665   36777777765  4455544 445556666666544  566666666664320 144444


Q ss_pred             CCCcHHHHHHH--cCCHHHHHHHH---------------------------------------hCCCCC-----------
Q 037827          103 ENLLPIHRAAK--QGQRNVVCYLL---------------------------------------EKTRAP-----------  130 (263)
Q Consensus       103 ~G~TPLh~Aa~--~g~~evv~~Ll---------------------------------------~~~a~p-----------  130 (263)
                      .+.+|||.++.  +++.++|++|+                                       .+|++.           
T Consensus       113 ~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~  192 (672)
T PHA02730        113 INDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYD  192 (672)
T ss_pred             cCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccccc
Confidence            45555555555  55555555555                                       444321           


Q ss_pred             ------------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcc--------
Q 037827          131 ------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLY--------  184 (263)
Q Consensus       131 ------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~--------  184 (263)
                                        ..+..+++..|++.+ +.++.+|.+|.||||++....     .++.++++.|+.        
T Consensus       193 ~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~G-adIN~kd~~G~TpLh~~~~~~-----~~~~eiv~~Li~~~~~~~~~  266 (672)
T PHA02730        193 SDRCKNSLHYYILSHRESESLSKDVIKCLIDNN-VSIHGRDEGGSLPIQYYWSCS-----TIDIEIVKLLIKDVDTCSVY  266 (672)
T ss_pred             CCccchhHHHHHHhhhhhhccCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcC-----cccHHHHHHHHhcccccccc
Confidence                              122456677777764 557888999999999633321     255789999988        


Q ss_pred             ------------------------cCCCCCCCC--CCCCCC-----------CCCCC---------------Chhhhhhh
Q 037827          185 ------------------------QWIPVQEEY--NPHAHA-----------HSENV---------------DGDLEKQL  212 (263)
Q Consensus       185 ------------------------~~~~v~~~~--~~~~~~-----------~~~~~---------------~~~~~~~~  212 (263)
                                              .|+++...+  -++.++           -+.+.               +++....+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~  346 (672)
T PHA02730        267 DDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAM  346 (672)
T ss_pred             ccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHH
Confidence                                    444443311  000011           11111               22333347


Q ss_pred             cccccccc---chhhhHHHHhhhccc---cccCCccceec
Q 037827          213 SETSHSAF---GFELAYLLLHWFVSF---RVSTTPLTLAT  246 (263)
Q Consensus       213 ~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~  246 (263)
                      +++|.+..   ..+++.+||..|||+   ..|.||||.|.
T Consensus       347 l~~Y~~~~~~v~ieIvelLIs~GAdIN~k~~G~TpLH~Aa  386 (672)
T PHA02730        347 LINYLHYGDMVSIPILRCMLDNGATMDKTTDNNYPLHDYF  386 (672)
T ss_pred             HHHHHhcCCcCcHHHHHHHHHCCCCCCcCCCCCcHHHHHH
Confidence            77887754   589999999999998   78899999874

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.77  E-value=6.2e-18  Score=145.75  Aligned_cols=144  Identities=14%  Similarity=-0.015  Sum_probs=112.4

Q ss_pred             hhcccChHHHHHHHHcC--CHHHHHHHHhccCCCcccccccCCcCHHHHHHHh---CCcHHHHHHHHHcCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLED--DWKGLEDYIMSKTPNALACIIVDQSSIFEFIVAS---TGKLELISTLIRYEADLPNVRDEE  103 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G--~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~---~G~~eiv~~Ll~~ga~l~~~~d~~  103 (263)
                      ..+..|.||||.|+..+  +.++++.|++.  +..++......|....++|+.   .|+.+++++|+++|+++ +.+|.+
T Consensus        46 ~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~--gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~  122 (209)
T PHA02859         46 DCNDLYETPIFSCLEKDKVNVEILKFLIEN--GADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSI-TEEDED  122 (209)
T ss_pred             ccCccCCCHHHHHHHcCCCCHHHHHHHHHC--CCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCC
Confidence            46778999999999854  89999999997  455555533456677787765   35899999999999995 999999


Q ss_pred             CCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHH
Q 037827          104 NLLPIHRAAK--QGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKG  181 (263)
Q Consensus       104 G~TPLh~Aa~--~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~  181 (263)
                      |.||||+|+.  .++.+++++|++.|                   ..++.+|.+|.||||.++..      .++.++++.
T Consensus       123 G~TpLh~a~~~~~~~~~iv~~Li~~g-------------------adin~~d~~g~t~Lh~~a~~------~~~~~iv~~  177 (209)
T PHA02859        123 GKNLLHMYMCNFNVRINVIKLLIDSG-------------------VSFLNKDFDNNNILYSYILF------HSDKKIFDF  177 (209)
T ss_pred             CCCHHHHHHHhccCCHHHHHHHHHcC-------------------CCcccccCCCCcHHHHHHHh------cCCHHHHHH
Confidence            9999999986  46899999996543                   34567888999999965543      256789999


Q ss_pred             HcccCCCCCCCCCCCCCCC
Q 037827          182 LLYQWIPVQEEYNPHAHAH  200 (263)
Q Consensus       182 li~~~~~v~~~~~~~~~~~  200 (263)
                      |+..|++++..+.-+.++.
T Consensus       178 Ll~~Gadi~~~d~~g~tpl  196 (209)
T PHA02859        178 LTSLGIDINETNKSGYNCY  196 (209)
T ss_pred             HHHcCCCCCCCCCCCCCHH
Confidence            9999988887765444443

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.76  E-value=3.2e-18  Score=140.07  Aligned_cols=136  Identities=12%  Similarity=0.017  Sum_probs=104.2

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhc---cCCCcccccccCCcCHHHHHHHhCCcHH---HHHHHHHcCCCCCCCCC
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMS---KTPNALACIIVDQSSIFEFIVASTGKLE---LISTLIRYEADLPNVRD  101 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~---~~~~~~~~~i~~~g~iv~~~AA~~G~~e---iv~~Ll~~ga~l~~~~d  101 (263)
                      ...|.+|.||||+|++.|+++.+..+...   .++..+.. .+..|....++||..|+.+   ++++|++.|+++ +.+|
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~-~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-n~~~   88 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLE-YNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI-NGKE   88 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHH-hcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc-cccC
Confidence            35678899999999999995433222111   01111222 2455666677999999874   689999999995 9998


Q ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHH
Q 037827          102 -EENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWK  180 (263)
Q Consensus       102 -~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~  180 (263)
                       ..|+||||+|+..|+.+++++|+                  ...+..++.+|..|.||||+|+..       ++.++++
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll------------------~~~g~d~n~~~~~g~tpL~~A~~~-------~~~~i~~  143 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLC------------------NQPGVNMEILNYAFKTPYYVACER-------HDAKMMN  143 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHH------------------hCCCCCCccccCCCCCHHHHHHHc-------CCHHHHH
Confidence             59999999999999999999995                  333445678899999999999987       6779999


Q ss_pred             HHcccCCCCC
Q 037827          181 GLLYQWIPVQ  190 (263)
Q Consensus       181 ~li~~~~~v~  190 (263)
                      .|+..|++++
T Consensus       144 ~Ll~~ga~~~  153 (154)
T PHA02736        144 ILRAKGAQCK  153 (154)
T ss_pred             HHHHcCCCCC
Confidence            9999998765

>PHA02917 ankyrin-like protein; Provisional

Probab=99.75  E-value=1.5e-17  Score=165.28  Aligned_cols=188  Identities=10%  Similarity=-0.025  Sum_probs=132.6

Q ss_pred             HHHHHHHHhccCCCcccccccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHH----H
Q 037827           47 WKGLEDYIMSKTPNALACIIVDQSSIFEFIVAST---GKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRN----V  119 (263)
Q Consensus        47 ~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~e----v  119 (263)
                      ++.|+.||.+  ...++.. +..|....++||+.   |+.++|++|+++|+++ +.+|..|+||||+|+..||.+    +
T Consensus        12 ~~~~~~l~~~--~~~~~~~-d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v-~~~~~~g~TpL~~Aa~~g~~~v~~~~   87 (661)
T PHA02917         12 LDELKQMLRD--RDPNDTR-NQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNP-LHKNWRQLTPLEEYTNSRHVKVNKDI   87 (661)
T ss_pred             HHHHHHHHhc--cCccccc-CCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCChhHHHHH
Confidence            5778888865  3344333 66678888876444   8899999999999995 999999999999999999854    5


Q ss_pred             HHHHHhCCC--C--C---------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827          120 VCYLLEKTR--A--P---------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       120 v~~Ll~~~a--~--p---------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~  186 (263)
                      |+.|++.+.  +  +         ..++.+++..|++. +..++.+|.+|.||||.++...     .++.++++.|+.+|
T Consensus        88 ~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~-Gadin~~d~~g~T~L~~~~a~~-----~~~~eivklLi~~G  161 (661)
T PHA02917         88 AMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEH-GFDLSVKCENHRSVIENYVMTD-----DPVPEIIDLFIENG  161 (661)
T ss_pred             HHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHc-CCCCCccCCCCccHHHHHHHcc-----CCCHHHHHHHHHcC
Confidence            678886543  2  1         45688999999877 5567899999999999654321     27889999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCh-hhhhhhcccccccc-------------chhhhHHHHhhhccc----cccCCccceec
Q 037827          187 IPVQEEYNPHAHAHSENVDG-DLEKQLSETSHSAF-------------GFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       187 ~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ++++..+.....- . ..+. +.....+.+.++++             ..++..+|+..|||.    +.|.||||+|.
T Consensus       162 a~vn~~d~~~~~g-~-~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~  237 (661)
T PHA02917        162 CSVLYEDEDDEYG-Y-AYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYI  237 (661)
T ss_pred             CCccccccccccc-c-ccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHH
Confidence            9997543211000 0 0000 01111122222222             357888899999999    78999999996

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.74  E-value=9.4e-18  Score=155.58  Aligned_cols=146  Identities=16%  Similarity=0.072  Sum_probs=123.8

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      +-...+|-+||..|+..|++++|+.|++.  +..++.. +....+...-||..|+.++|++|+++|+| +++.|..|.|-
T Consensus        78 Dge~IegappLWaAsaAGHl~vVk~L~~~--ga~VN~t-T~TNStPLraACfDG~leivKyLvE~gad-~~IanrhGhTc  153 (615)
T KOG0508|consen   78 DGETIEGAPPLWAASAAGHLEVVKLLLRR--GASVNDT-TRTNSTPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTC  153 (615)
T ss_pred             CCcccCCCchhhHHhccCcHHHHHHHHHh--cCccccc-cccCCccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCee
Confidence            44567788999999999999999999998  3555443 22224555689999999999999999999 59999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      ||+||.+||++|++||++.|+|+               ..|+.++++.|++.+.  ...+|..|.|||-.|+..      
T Consensus       154 LmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga--~i~~d~~GmtPL~~Aa~t------  225 (615)
T KOG0508|consen  154 LMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGA--KIDVDGHGMTPLLLAAVT------  225 (615)
T ss_pred             EEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCc--eeeecCCCCchHHHHhhh------
Confidence            99999999999999999999983               6789999999998753  345788899999999987      


Q ss_pred             CcchHHHHHHcccC
Q 037827          173 GIRLGYWKGLLYQW  186 (263)
Q Consensus       173 ~~~~~~~~~li~~~  186 (263)
                       |+..++++|+...
T Consensus       226 -G~~~iVe~L~~~~  238 (615)
T KOG0508|consen  226 -GHTDIVERLLQCE  238 (615)
T ss_pred             -cchHHHHHHhcCC
Confidence             6779999999743

>PHA02795 ankyrin-like protein; Provisional

Probab=99.74  E-value=2.6e-17  Score=155.08  Aligned_cols=185  Identities=11%  Similarity=-0.046  Sum_probs=141.8

Q ss_pred             HHHHcCCHHHHHHHHhccCCCccc--c---cccCCcCHHHHHHHh--CCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827           40 RYLLEDDWKGLEDYIMSKTPNALA--C---IIVDQSSIFEFIVAS--TGKLELISTLIRYEADLPNVRDEENLLPIHRAA  112 (263)
Q Consensus        40 ~Aa~~G~~e~v~~Ll~~~~~~~~~--~---~i~~~g~iv~~~AA~--~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa  112 (263)
                      .|+..+..|+++.|+++  +..++  +   ..+..+..+.++|+.  .|+.++|++|+++||++ +.+  ++.||||.|+
T Consensus        83 ~~~~~~~k~~~~~l~s~--~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADI-n~~--~~~t~lh~A~  157 (437)
T PHA02795         83 LFAYITYKDIISALVSK--NYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVI-YKI--ECLNAYFRGI  157 (437)
T ss_pred             HHhhcchHHHHHHHHhc--ccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCC-CCC--CCCCHHHHHH
Confidence            78989999999999998  33322  1   113344677777777  89999999999999995 874  4589999999


Q ss_pred             HcCCHHHHHHHHhCCCCC---------------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCc
Q 037827          113 KQGQRNVVCYLLEKTRAP---------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFA  171 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~p---------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~  171 (263)
                      ..|+.++|++|+++|+++                     ..+..+++..|++.+ +.++.+|.+|.||||+|++.     
T Consensus       158 ~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-ADIN~kD~~G~TpLh~Aa~~-----  231 (437)
T PHA02795        158 CKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-EDINQLDAGGRTLLYRAIYA-----  231 (437)
T ss_pred             HcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-CCcCcCCCCCCCHHHHHHHc-----
Confidence            999999999999999741                     123468888888874 56799999999999999987     


Q ss_pred             CCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc-cccCCcc
Q 037827          172 SGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF-RVSTTPL  242 (263)
Q Consensus       172 s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  242 (263)
                        ++.++++.|+..|++++..+..+.++.+.++....     ..+.+..+.++.-+|+..|+++ .-+.|++
T Consensus       232 --g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~-----~~~~~~~~~eIvelLL~~gadI~~~~~~~~  296 (437)
T PHA02795        232 --GYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS-----VIARRETHLKILEILLREPLSIDCIKLAIL  296 (437)
T ss_pred             --CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC-----cccccccHHHHHHHHHhCCCCCCchhHHhh
Confidence              77899999999999999998777666665543221     0122223356778889999998 4444543

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.72  E-value=6.5e-18  Score=163.66  Aligned_cols=159  Identities=21%  Similarity=0.198  Sum_probs=129.9

Q ss_pred             hhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           26 EKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        26 ~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      .....|.+|+|.||.|+.+|+.++++.|++.  ...+... +..|..+.++|||.|+.+++++|+.++.. +|+.+..|.
T Consensus        41 s~n~qd~~gfTalhha~Lng~~~is~llle~--ea~ldl~-d~kg~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~  116 (854)
T KOG0507|consen   41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDY--EALLDLC-DTKGILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENE  116 (854)
T ss_pred             cccccCccchhHHHHHHhcCchHHHHHHhcc--hhhhhhh-hccCcceEEehhhcCcchHHHHHHhcccC-CCcccccCc
Confidence            3456778999999999999999999999986  3344344 35566777899999999999999999966 699999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCc---------cccccCCCchHHH
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKL---------AWAEIAGTGKILE  161 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~---------~~~~D~~G~TPLH  161 (263)
                      ||||+||++||.++|.+|+.++++|               .-|..+++..|++.  ++         -..++..+-+|||
T Consensus       117 tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~--~~~~~~~~~~~~~~~~~~~~~plH  194 (854)
T KOG0507|consen  117 TPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK--KFPVQSSLRVGDIKRPFPAIYPLH  194 (854)
T ss_pred             CccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh--ccchhhcccCCCCCCCCCCcCCcc
Confidence            9999999999999999999999985               33444555555544  11         1234778999999


Q ss_pred             HHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCC
Q 037827          162 LLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHA  197 (263)
Q Consensus       162 lAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~  197 (263)
                      +||++       ++.+++++|+..|.+||.....+.
T Consensus       195 laakn-------gh~~~~~~ll~ag~din~~t~~gt  223 (854)
T KOG0507|consen  195 LAAKN-------GHVECMQALLEAGFDINYTTEDGT  223 (854)
T ss_pred             hhhhc-------chHHHHHHHHhcCCCcccccccch
Confidence            99998       788999999999999999965553

>PHA02730 ankyrin-like protein; Provisional

Probab=99.72  E-value=5.6e-17  Score=159.48  Aligned_cols=181  Identities=14%  Similarity=0.034  Sum_probs=133.0

Q ss_pred             HHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC---cHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC--CHHHHH
Q 037827           47 WKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG---KLELISTLIRYEADLPNVRDEENLLPIHRAAKQG--QRNVVC  121 (263)
Q Consensus        47 ~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G---~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g--~~evv~  121 (263)
                      ...++..++.  ...++...+..|.++.++|+..|   +.++|++|+++||++ +++|..|+||||+|+..|  +.++|+
T Consensus        20 ~~~~~~~~~~--~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdi-n~kD~~G~TPLh~Aa~~~~~~~eIv~   96 (672)
T PHA02730         20 YKKIKLEIET--CHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVER-LCRNNEGLTPLGVYSKRKYVKSQIVH   96 (672)
T ss_pred             HHHHHHHHHH--hcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCC-cccCCCCCChHHHHHHcCCCcHHHHH
Confidence            3456666766  22343333667899999999997   599999999999995 999999999999999977  799999


Q ss_pred             HHHhCCCC------------C-------CCCCHHHHHHHHHhCCCccccc----c-CCCchHHHHHhcCCCCCcCCcchH
Q 037827          122 YLLEKTRA------------P-------LDGSDDVAYGLLRKHPKLAWAE----I-AGTGKILELLSKRPKAFASGIRLG  177 (263)
Q Consensus       122 ~Ll~~~a~------------p-------~~~~~~va~~Ll~~~~~~~~~~----D-~~G~TPLHlAA~~~~~f~s~~~~~  177 (263)
                      +|++.|++            |       ..+..+++..|+..++..++..    + ..|.+|+++++..       ++.+
T Consensus        97 ~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~-------~~~e  169 (672)
T PHA02730         97 LLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPN-------PRPE  169 (672)
T ss_pred             HHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCC-------CchH
Confidence            99999762            1       3778889999997555444443    2 2899999999987       5679


Q ss_pred             HHHHHcccCCCCC-------CCCCCCC-CCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccce
Q 037827          178 YWKGLLYQWIPVQ-------EEYNPHA-HAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTL  244 (263)
Q Consensus       178 ~~~~li~~~~~v~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  244 (263)
                      +++.||.+|++++       ..++|.. +..+-..-...+      .++ -..+++.+||..||++    +.|.||||.
T Consensus       170 IvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~------~~~-n~~eiv~lLIs~GadIN~kd~~G~TpLh~  241 (672)
T PHA02730        170 VLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRE------SES-LSKDVIKCLIDNNVSIHGRDEGGSLPIQY  241 (672)
T ss_pred             HHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhh------hhc-cCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            9999999999995       1234442 111100000000      111 1288999999999999    799999994

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.71  E-value=5.2e-18  Score=173.05  Aligned_cols=201  Identities=19%  Similarity=0.096  Sum_probs=155.1

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCC-cHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTG-KLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G-~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      .++..|.||||.|+..++...|+.+++.  ....+.. +..|....++||..| +.+++..++..|++ ++.....|+||
T Consensus       402 ~~gk~gvTplh~aa~~~~~~~v~l~l~~--gA~~~~~-~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~-~n~~s~~G~T~  477 (1143)
T KOG4177|consen  402 SAGKNGVTPLHVAAHYGNPRVVKLLLKR--GASPNAK-AKLGYTPLHVAAKKGRYLQIARLLLQYGAD-PNAVSKQGFTP  477 (1143)
T ss_pred             cCCCCCcceeeehhhccCcceEEEEecc--CCChhhH-hhcCCChhhhhhhcccHhhhhhhHhhcCCC-cchhccccCcc
Confidence            5566666666666666666666666654  2222222 233356666999999 99999999999999 59999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCC--C-------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRA--P-------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~--p-------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      ||+|++.||.+++..|++.++.  +             ..+...++..++.+ +..++.++..|.||||+|+.+      
T Consensus       478 Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~-ga~v~~~~~r~~TpLh~A~~~------  550 (1143)
T KOG4177|consen  478 LHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEH-GANVDLRTGRGYTPLHVAVHY------  550 (1143)
T ss_pred             hhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhc-CCceehhcccccchHHHHHhc------
Confidence            9999999999999999998853  1             34555566666665 556788899999999999998      


Q ss_pred             CcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceeccc
Q 037827          173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATND  248 (263)
Q Consensus       173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  248 (263)
                       +++.+|++|+.+|++++..++-+-+|.|.+|-...             .+++.||+.+|||.    -.+.|||+.|.+-
T Consensus       551 -g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~-------------~~i~~LLlk~GA~vna~d~~g~TpL~iA~~l  616 (1143)
T KOG4177|consen  551 -GNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGH-------------NDIAELLLKHGASVNAADLDGFTPLHIAVRL  616 (1143)
T ss_pred             -CCchHHHHhhhCCccccccCCCCCChhhHHHHcCh-------------HHHHHHHHHcCCCCCcccccCcchhHHHHHh
Confidence             78899999999999999998555666665554444             89999999999999    8899999999644


Q ss_pred             cccCch
Q 037827          249 VRLPHS  254 (263)
Q Consensus       249 ~~~~~~  254 (263)
                      -++--+
T Consensus       617 g~~~~~  622 (1143)
T KOG4177|consen  617 GYLSVV  622 (1143)
T ss_pred             cccchh
Confidence            444333

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.71  E-value=4.8e-17  Score=152.80  Aligned_cols=188  Identities=18%  Similarity=0.124  Sum_probs=145.7

Q ss_pred             hHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q 037827           35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ  114 (263)
Q Consensus        35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~  114 (263)
                      -..+..|+..|+.+.|..|+..  +...+. .+.+|-.+.+-+|...+.+||++|+++|+++ +..|..||||||-|+..
T Consensus        41 sa~~l~A~~~~d~~ev~~ll~~--ga~~~~-~n~DglTalhq~~id~~~e~v~~l~e~ga~V-n~~d~e~wtPlhaaasc  116 (527)
T KOG0505|consen   41 SAVFLEACSRGDLEEVRKLLNR--GASPNL-CNVDGLTALHQACIDDNLEMVKFLVENGANV-NAQDNEGWTPLHAAASC  116 (527)
T ss_pred             hHHHHhccccccHHHHHHHhcc--CCCccc-cCCccchhHHHHHhcccHHHHHHHHHhcCCc-cccccccCCcchhhccc
Confidence            4457788999999999999987  233333 3667788889999999999999999999995 99999999999999999


Q ss_pred             CCHHHHHHHHhCCCC----------C-------------------------------CCCCHHHHHHHHHhCCCcccccc
Q 037827          115 GQRNVVCYLLEKTRA----------P-------------------------------LDGSDDVAYGLLRKHPKLAWAEI  153 (263)
Q Consensus       115 g~~evv~~Ll~~~a~----------p-------------------------------~~~~~~va~~Ll~~~~~~~~~~D  153 (263)
                      ||..+|++|+++|++          |                               ...+++-+...+. .+....+.+
T Consensus       117 g~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~-~G~~~d~~~  195 (527)
T KOG0505|consen  117 GYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN-AGAELDARH  195 (527)
T ss_pred             ccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh-ccccccccc
Confidence            999999999999996          1                               0011111122333 344456667


Q ss_pred             CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccc-hhhhHHHHhhh
Q 037827          154 AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFG-FELAYLLLHWF  232 (263)
Q Consensus       154 ~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  232 (263)
                      ..|.|.||+||.+       |..++.+.||..|.+++..+..+-.+.|++              +.|. -++.-+|+..|
T Consensus       196 ~rG~T~lHvAaa~-------Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAA--------------A~Wg~~~~~elL~~~g  254 (527)
T KOG0505|consen  196 ARGATALHVAAAN-------GYTEVAALLLQAGYSVNIKDYDGWTPLHAA--------------AHWGQEDACELLVEHG  254 (527)
T ss_pred             cccchHHHHHHhh-------hHHHHHHHHHHhccCcccccccCCCcccHH--------------HHhhhHhHHHHHHHhh
Confidence            7799999999998       778999999999999999987664444332              3343 23344778888


Q ss_pred             ccc----cccCCccceeccc
Q 037827          233 VSF----RVSTTPLTLATND  248 (263)
Q Consensus       233 ~~~----~~~~~~~~~~~~~  248 (263)
                      +++    +.+.|||+||-.+
T Consensus       255 a~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  255 ADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             cccchhhhcCCCCccchhhh
Confidence            888    9999999999653

>PHA02795 ankyrin-like protein; Provisional

Probab=99.70  E-value=2.4e-16  Score=148.61  Aligned_cols=159  Identities=9%  Similarity=-0.071  Sum_probs=120.6

Q ss_pred             hhcccChHHHHHHHH--cCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC-----
Q 037827           29 IKDIANYKQVTRYLL--EDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRD-----  101 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~--~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d-----  101 (263)
                      .++..++|+||.|+.  .|+.++|+.|+++  ++.++..   ++....++|+..|+.+++++|+++|++..+..+     
T Consensus       111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~--GADIn~~---~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~  185 (437)
T PHA02795        111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDH--GAVIYKI---ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYK  185 (437)
T ss_pred             hccccccHHHHHHHHhcCCCHHHHHHHHHC--CCCCCCC---CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhh
Confidence            356668899999988  8889999999987  4555442   224455678888888888888888875323322     


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827          102 EENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus       102 ~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      ..|.||+|.|+..++.+++++|+++|++.               ..++.+++..|++. ++.++.+|.+|.||||+|+.+
T Consensus       186 ~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~-GAdIN~~d~~G~TpLh~Aa~~  264 (437)
T PHA02795        186 IIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLEN-GANVNAVMSNGYTCLDVAVDR  264 (437)
T ss_pred             hhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHc
Confidence            34778888888888888888888888761               56777888878876 456789999999999999998


Q ss_pred             CCC-CcCCcchHHHHHHcccCCCCCCCC
Q 037827          167 PKA-FASGIRLGYWKGLLYQWIPVQEEY  193 (263)
Q Consensus       167 ~~~-f~s~~~~~~~~~li~~~~~v~~~~  193 (263)
                      +.. +..+++.++++.|+..|++++...
T Consensus       265 g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        265 GSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             CCcccccccHHHHHHHHHhCCCCCCchh
Confidence            642 344568899999999999888765

>PHA02792 ankyrin-like protein; Provisional

Probab=99.70  E-value=6.4e-17  Score=157.80  Aligned_cols=55  Identities=15%  Similarity=0.173  Sum_probs=36.2

Q ss_pred             CHHHHHHHhCC-------cHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhC
Q 037827           71 SIFEFIVASTG-------KLELISTLIRYEADLPNVRDEENLLPIHRAAKQG--QRNVVCYLLEK  126 (263)
Q Consensus        71 ~iv~~~AA~~G-------~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g--~~evv~~Ll~~  126 (263)
                      .++.++|+.++       +.|++++|+++|+++ +.+|..|.||||+|+.+.  ..|++++|+..
T Consensus       176 ~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~  239 (631)
T PHA02792        176 KTVLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHTTLYYYVDKCDIKREIFDALFDS  239 (631)
T ss_pred             CchHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence            44444666666       667777777777773 666767777777777766  56666666653

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.66  E-value=9.3e-17  Score=136.67  Aligned_cols=187  Identities=16%  Similarity=0.078  Sum_probs=137.7

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+.+||..++.|+-+|....+...|.++..+  +.. +.-+....-++...-+++++..+.++  . +|..|+.|+|||
T Consensus        91 ~t~p~g~~~~~v~ap~~s~~k~sttltN~~rg--nev-s~~p~s~~slsVhql~L~~~~~~~~n--~-VN~~De~GfTpL  164 (296)
T KOG0502|consen   91 ETDPEGWSALLVAAPCGSVDKVSTTLTNGARG--NEV-SLMPWSPLSLSVHQLHLDVVDLLVNN--K-VNACDEFGFTPL  164 (296)
T ss_pred             CCCchhhhhhhhcCCCCCcceeeeeecccccC--Ccc-ccccCChhhHHHHHHHHHHHHHHhhc--c-ccCccccCchHh
Confidence            34556888888888888777776666652111  111 11112223378888888888877765  3 589999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      ++|+.+||+++|++|++.|++|               ..|+.+|+..|+.+..+ +|.-|.+|-|||-+|++-       
T Consensus       165 iWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vd-VNvyDwNGgTpLlyAvrg-------  236 (296)
T KOG0502|consen  165 IWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVD-VNVYDWNGGTPLLYAVRG-------  236 (296)
T ss_pred             HHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCC-cceeccCCCceeeeeecC-------
Confidence            9999999999999999999985               78899999999998665 688899999999999984       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccc
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLT  243 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  243 (263)
                      ++.++++.|+..|++++..+.-+.++-..+|--             . .-.-.++|..+++.    .+.+||||
T Consensus       237 nhvkcve~Ll~sGAd~t~e~dsGy~~mdlAVal-------------G-yr~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  237 NHVKCVESLLNSGADVTQEDDSGYWIMDLAVAL-------------G-YRIVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             ChHHHHHHHHhcCCCcccccccCCcHHHHHHHh-------------h-hHHHHHHHHHHHHHHhhcccCCCCCC
Confidence            788999999999999988876555544322211             1 11345666667766    56889986

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.63  E-value=5.3e-16  Score=158.48  Aligned_cols=194  Identities=18%  Similarity=0.134  Sum_probs=136.7

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ...+.++.||+|.|+..+.+++++.++.+  +..+.+. +.+|-...+.||..|+.+++.+|+.+|+. ++..+..|+||
T Consensus       203 ~a~~~~~~tpl~~a~~~nri~~~eLll~~--gadv~a~-d~~gl~~lh~a~~~g~~~i~~~l~~~ga~-~~~~~vr~~tp  278 (1143)
T KOG4177|consen  203 NASALNGFTPLHIACKKNRIKVVELLLKH--GADVSAK-DESGLTPLHVAAFMGHLDIVKLLLQHGAS-VNVSTVRGETP  278 (1143)
T ss_pred             cccccCCCCchhhhccccccceeeeeeec--cCcCCcc-cccCccHHHHHHhccchhHHHHHHhcccc-cCcccccccCc
Confidence            35677889999999999999998887776  6667666 56666667799999999999999999999 59999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      ||.||..++++++++|+++|+++               ..+...+...+++. +..+++.+..|.||||++|...     
T Consensus       279 lh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~-~~~~~aar~~g~t~lHlaa~~~-----  352 (1143)
T KOG4177|consen  279 LHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQA-GATPNAARTAGYTPLHLAAKEG-----  352 (1143)
T ss_pred             chhhhccchhhhHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhc-cCCccccCcCCcccccHhhhhh-----
Confidence            99999999999999999999873               45555666666665 4446777888888888888763     


Q ss_pred             CcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                        +.++..++...+.+......-..++.+.++....             .+.+++++..|++.    +++.|||++|+
T Consensus       353 --~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~-------------~~~v~Lll~~ga~~~~~gk~gvTplh~aa  415 (1143)
T KOG4177|consen  353 --QVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGR-------------VSVVELLLEAGADPNSAGKNGVTPLHVAA  415 (1143)
T ss_pred             --hHHHHHHhhccccccCcccccCCcchhhhcccCc-------------hhHHHhhhhccCCcccCCCCCcceeeehh
Confidence              3344544444443333322223444444444444             44455555555555    55556665553

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.62  E-value=7.7e-16  Score=139.13  Aligned_cols=139  Identities=14%  Similarity=0.178  Sum_probs=109.4

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc------------------CHHHH--------------
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS------------------SIFEF--------------   75 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g------------------~iv~~--------------   75 (263)
                      +..|.+|.|+||+|+..+|+++|+.||+. ....++.. ++.|                  .+|+.              
T Consensus       262 NlaDsNGNTALHYsVSHaNF~VV~~LLDS-gvC~VD~q-NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~  339 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANFDVVSILLDS-GVCDVDQQ-NRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQH  339 (452)
T ss_pred             hhhcCCCCeeeeeeecccchHHHHHHhcc-Cccccccc-ccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhh
Confidence            57889999999999999999999999998 45555433 3333                  23332              


Q ss_pred             ------HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827           76 ------IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA  149 (263)
Q Consensus        76 ------~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~  149 (263)
                            +|+.+|+.++|+.|+..|+|+ |++|.+|.|+|++||.+||+|+|++|+                  ..-....
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdV-NiQDdDGSTALMCA~EHGhkEivklLL------------------A~p~cd~  400 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADV-NIQDDDGSTALMCAAEHGHKEIVKLLL------------------AVPSCDI  400 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCC-ccccCCccHHHhhhhhhChHHHHHHHh------------------ccCcccc
Confidence                  899999999999999999995 999999999999999999999999995                  3333445


Q ss_pred             ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCC
Q 037827          150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNP  195 (263)
Q Consensus       150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~  195 (263)
                      ...|.+|.|+|.+|-..       |+.+|- .+||...++.....|
T Consensus       401 sLtD~DgSTAl~IAlea-------gh~eIa-~mlYa~~n~~~s~~p  438 (452)
T KOG0514|consen  401 SLTDVDGSTALSIALEA-------GHREIA-VMLYAHMNIKRSKLP  438 (452)
T ss_pred             eeecCCCchhhhhHHhc-------CchHHH-HHHHHHHHhhhhcCC
Confidence            66799999999999887       444554 466665555443333

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.62  E-value=1.8e-15  Score=154.19  Aligned_cols=150  Identities=24%  Similarity=0.246  Sum_probs=125.5

Q ss_pred             HHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHH
Q 037827           72 IFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDD  136 (263)
Q Consensus        72 iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~  136 (263)
                      ...+.||..|+.++++.|++.|+++ +.+|.+|+||||+||.+|+.++|++|+++|+++               ..++.+
T Consensus       527 ~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~  605 (823)
T PLN03192        527 SNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHK  605 (823)
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence            3445899999999999999999994 999999999999999999999999999999872               567788


Q ss_pred             HHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhcccc
Q 037827          137 VAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETS  216 (263)
Q Consensus       137 va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                      ++..|+.. +...  ....|.+|||.||.+       +++++++.|+.+|+++|..+..+.++.|.++....        
T Consensus       606 iv~~L~~~-~~~~--~~~~~~~~L~~Aa~~-------g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~--------  667 (823)
T PLN03192        606 IFRILYHF-ASIS--DPHAAGDLLCTAAKR-------NDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDH--------  667 (823)
T ss_pred             HHHHHHhc-Cccc--CcccCchHHHHHHHh-------CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc--------
Confidence            88888754 3322  245688999999997       78899999999999999988777777766554444        


Q ss_pred             ccccchhhhHHHHhhhccc----ccc-CCcccee
Q 037827          217 HSAFGFELAYLLLHWFVSF----RVS-TTPLTLA  245 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~  245 (263)
                           .+++.+|+..|||.    +.+ .||++++
T Consensus       668 -----~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~  696 (823)
T PLN03192        668 -----VDMVRLLIMNGADVDKANTDDDFSPTELR  696 (823)
T ss_pred             -----HHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence                 78899999999999    444 8999987

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.62  E-value=9.2e-15  Score=132.45  Aligned_cols=116  Identities=13%  Similarity=0.016  Sum_probs=94.2

Q ss_pred             hhcccChH-HHHHHHHcCCHHHHHHHHhccCCCcccccc---cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCC-CCC
Q 037827           29 IKDIANYK-QVTRYLLEDDWKGLEDYIMSKTPNALACII---VDQSSIFEFIVASTGKLELISTLIRYEADLPNVR-DEE  103 (263)
Q Consensus        29 ~~~~~~~t-~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i---~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~-d~~  103 (263)
                      .+|..+++ +||.|+..|+.++++.|++.  +..++...   +..|....++||..|+.+++++|+++||++ +.+ +..
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~--GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADV-N~~~~~~  103 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKL--GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV-NRYAEEA  103 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHC--CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-CcccCCC
Confidence            35666655 56667777999999999997  34554432   235688889999999999999999999995 986 468


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827          104 NLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus       104 G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      |.||||+|+..|+.+++++|+..|                   +.++.+|.+|.||||+|++.
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~G-------------------Adin~kd~~G~TpL~~A~~~  147 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSYG-------------------ADINIQTNDMVTPIELALMI  147 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCC-------------------CCCCCCCCCCCCHHHHHHHh
Confidence            999999999999999999997543                   34677889999999999886

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.61  E-value=5.1e-15  Score=109.73  Aligned_cols=84  Identities=21%  Similarity=0.271  Sum_probs=46.2

Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCH
Q 037827           38 VTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQR  117 (263)
Q Consensus        38 Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~  117 (263)
                      ||.||..|+.++++.|++. . ..++.     |+...++||..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.
T Consensus         1 L~~A~~~~~~~~~~~ll~~-~-~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~   72 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEK-G-ADINL-----GNTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAENGNL   72 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHT-T-STTTS-----SSBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHTTHH
T ss_pred             CHHHHHcCCHHHHHHHHHC-c-CCCCC-----CCCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHcCCH
Confidence            4566666666666666654 2 11111     334555666666666666666666663 66666666666666666666


Q ss_pred             HHHHHHHhCCCC
Q 037827          118 NVVCYLLEKTRA  129 (263)
Q Consensus       118 evv~~Ll~~~a~  129 (263)
                      +++++|+++|++
T Consensus        73 ~~~~~Ll~~g~~   84 (89)
T PF12796_consen   73 EIVKLLLEHGAD   84 (89)
T ss_dssp             HHHHHHHHTTT-
T ss_pred             HHHHHHHHcCCC
Confidence            666666555543

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.60  E-value=1.8e-15  Score=124.65  Aligned_cols=101  Identities=23%  Similarity=0.167  Sum_probs=65.1

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAG  155 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~  155 (263)
                      +|+..+.+..|+.|++..|+.+|.+|.+|.||||.|+.+||.+||+.|+.                  . ++.+.++...
T Consensus        69 waae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~------------------~-gAn~~a~T~~  129 (228)
T KOG0512|consen   69 WAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLL------------------S-GANKEAKTNE  129 (228)
T ss_pred             HHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHH------------------c-cCCccccccc
Confidence            67777777777777777777677777777777777777777777776642                  2 2234555666


Q ss_pred             CchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCC
Q 037827          156 TGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSE  202 (263)
Q Consensus       156 G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~  202 (263)
                      |+||||-|+..       .+++++-+|+++|++|++...-.-+|.|.
T Consensus       130 GWTPLhSAckW-------nN~~va~~LLqhgaDVnA~t~g~ltpLhl  169 (228)
T KOG0512|consen  130 GWTPLHSACKW-------NNFEVAGRLLQHGADVNAQTKGLLTPLHL  169 (228)
T ss_pred             Cccchhhhhcc-------cchhHHHHHHhccCcccccccccchhhHH
Confidence            77777766665       45566777777777777665333333343

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.60  E-value=8e-15  Score=108.68  Aligned_cols=73  Identities=27%  Similarity=0.328  Sum_probs=60.5

Q ss_pred             HHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHH
Q 037827           75 FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAY  139 (263)
Q Consensus        75 ~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~  139 (263)
                      ++||..|+.+++++|++.++++ +.    |.||||+|+..|+.+++++|+++|+++               ..+..+++.
T Consensus         2 ~~A~~~~~~~~~~~ll~~~~~~-~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    2 HIAAQNGNLEILKFLLEKGADI-NL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHTTTHHHHHHHHHTTSTT-TS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHCcCCC-CC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            3799999999999999999885 55    899999999999999999999999873               677888888


Q ss_pred             HHHHhCCCcccccc
Q 037827          140 GLLRKHPKLAWAEI  153 (263)
Q Consensus       140 ~Ll~~~~~~~~~~D  153 (263)
                      .|++. +..++.+|
T Consensus        77 ~Ll~~-g~~~~~~n   89 (89)
T PF12796_consen   77 LLLEH-GADVNIRN   89 (89)
T ss_dssp             HHHHT-TT-TTSS-
T ss_pred             HHHHc-CCCCCCcC
Confidence            88877 44445443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.58  E-value=4.2e-15  Score=131.11  Aligned_cols=114  Identities=14%  Similarity=0.074  Sum_probs=99.1

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ..-|..|++|||+||..|+..+|+.||..  ++.+++. +.+.++..++||..|+-++|+.|++..+|+ |+.|..|.||
T Consensus        28 n~gddhgfsplhwaakegh~aivemll~r--garvn~t-nmgddtplhlaaahghrdivqkll~~kadv-navnehgntp  103 (448)
T KOG0195|consen   28 NVGDDHGFSPLHWAAKEGHVAIVEMLLSR--GARVNST-NMGDDTPLHLAAAHGHRDIVQKLLSRKADV-NAVNEHGNTP  103 (448)
T ss_pred             ccccccCcchhhhhhhcccHHHHHHHHhc--ccccccc-cCCCCcchhhhhhcccHHHHHHHHHHhccc-chhhccCCCc
Confidence            45677899999999999999999999987  5666655 445588889999999999999999999995 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHh
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLS  164 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA  164 (263)
                      ||+||..|.-.+++-|++.                   ++.+++.+++|.|||..|-
T Consensus       104 lhyacfwgydqiaedli~~-------------------ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen  104 LHYACFWGYDQIAEDLISC-------------------GAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             hhhhhhhcHHHHHHHHHhc-------------------cceeeecccCCCCchhhhc
Confidence            9999999999998888643                   4457888999999998663

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.57  E-value=2e-14  Score=118.57  Aligned_cols=126  Identities=14%  Similarity=0.110  Sum_probs=104.9

Q ss_pred             HHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCC
Q 037827           37 QVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQ  116 (263)
Q Consensus        37 ~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~  116 (263)
                      -+.+|+.++.+..|+.||+. .+..++.+ +.++.+..+-||++|+.+||+.|+..||+ ++++...||||||-||...+
T Consensus        66 l~lwaae~nrl~eV~~lL~e-~an~vNtr-D~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T~~GWTPLhSAckWnN  142 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSE-KANHVNTR-DEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKTNEGWTPLHSACKWNN  142 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHh-cccccccc-ccccccHHHHHHhcCchHHHHHHHHccCC-cccccccCccchhhhhcccc
Confidence            36789999999999999998 78888877 77778889999999999999999999999 59999999999999999999


Q ss_pred             HHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827          117 RNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK  165 (263)
Q Consensus       117 ~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~  165 (263)
                      .+|+-+|+++|+|.                ..+....+..|+....-.+-.++..+.||+.+|-+
T Consensus       143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARR  207 (228)
T KOG0512|consen  143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARR  207 (228)
T ss_pred             hhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHH
Confidence            99999999998871                34455555555555333455567788888876644

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.57  E-value=4e-15  Score=126.75  Aligned_cols=129  Identities=13%  Similarity=0.024  Sum_probs=98.3

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      .-|+.|.|||.+|+..|++..|++|++.  +...... .+..+...-+|+..|+.+||++|+.+++|+ |.-|-+|.|||
T Consensus       155 ~~De~GfTpLiWAaa~G~i~vV~fLL~~--GAdp~~l-gk~resALsLAt~ggytdiV~lLL~r~vdV-NvyDwNGgTpL  230 (296)
T KOG0502|consen  155 ACDEFGFTPLIWAAAKGHIPVVQFLLNS--GADPDAL-GKYRESALSLATRGGYTDIVELLLTREVDV-NVYDWNGGTPL  230 (296)
T ss_pred             CccccCchHhHHHHhcCchHHHHHHHHc--CCChhhh-hhhhhhhHhHHhcCChHHHHHHHHhcCCCc-ceeccCCCcee
Confidence            4577899999999999999999999987  2222221 333355555899999999999999999994 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      -+|++.||.+||+.|+..                   ++++++.|..|.+++.+|.+.+       .- +++..|...+.
T Consensus       231 lyAvrgnhvkcve~Ll~s-------------------GAd~t~e~dsGy~~mdlAValG-------yr-~Vqqvie~h~l  283 (296)
T KOG0502|consen  231 LYAVRGNHVKCVESLLNS-------------------GADVTQEDDSGYWIMDLAVALG-------YR-IVQQVIEKHAL  283 (296)
T ss_pred             eeeecCChHHHHHHHHhc-------------------CCCcccccccCCcHHHHHHHhh-------hH-HHHHHHHHHHH
Confidence            999999999999988643                   3456788899999999988863       22 56666555433

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.55  E-value=2.4e-14  Score=129.73  Aligned_cols=104  Identities=11%  Similarity=-0.036  Sum_probs=87.7

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC----CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRD----EENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP  146 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d----~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~  146 (263)
                      ..+.+.|+..|+.+++++|+++|+++ +.++    ..|.||||+|+..|+.+++++|+++|+                  
T Consensus        34 ~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GA------------------   94 (300)
T PHA02884         34 ANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGA------------------   94 (300)
T ss_pred             CHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------------------
Confidence            56667899999999999999999995 9874    689999999999999999999965443                  


Q ss_pred             Cccccc-cCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCC
Q 037827          147 KLAWAE-IAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHS  201 (263)
Q Consensus       147 ~~~~~~-D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~  201 (263)
                       .++.+ +..|.||||+|+..       ++.++++.|+..|++++..+.-+.+|.+
T Consensus        95 -DVN~~~~~~g~TpLh~Aa~~-------~~~eivklLL~~GAdin~kd~~G~TpL~  142 (300)
T PHA02884         95 -DVNRYAEEAKITPLYISVLH-------GCLKCLEILLSYGADINIQTNDMVTPIE  142 (300)
T ss_pred             -CcCcccCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence             45664 46899999999987       6789999999999999998765555444

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.53  E-value=4.9e-14  Score=142.18  Aligned_cols=191  Identities=17%  Similarity=0.054  Sum_probs=123.7

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCC-CcccccccCCcCHHHH-HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTP-NALACIIVDQSSIFEF-IVASTGKLELISTLIRYEADLPNVRDEENLLPIHR  110 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~-~~~~~~i~~~g~iv~~-~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~  110 (263)
                      .+..+|+.|+..||.+.++.+++. .+ ..++. .+..|....+ .|+..++.++++.|+++|+     ++..|.||||.
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~-~~~~~in~-~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~   88 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEE-PKKLNINC-PDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHA   88 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhcc-ccccCCCC-cCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHH
Confidence            568899999999999999999986 22 23332 2556777778 8999999999999999987     57789999999


Q ss_pred             HHHcCCHHHHHHHHhCCCC--CCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          111 AAKQGQRNVVCYLLEKTRA--PLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~a~--p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      |+.. ..+.++.++....+  +..+..    .+..   +.....+..|.||||+||.+       ++.++++.|+..|++
T Consensus        89 A~~~-~~~~v~~ll~~l~~~~~~~~~~----~~~~---~~~~~~~~~G~TpLhlAa~~-------~~~eiVklLL~~GAd  153 (743)
T TIGR00870        89 ISLE-YVDAVEAILLHLLAAFRKSGPL----ELAN---DQYTSEFTPGITALHLAAHR-------QNYEIVKLLLERGAS  153 (743)
T ss_pred             HHhc-cHHHHHHHHHHHhhcccccCch----hhhc---cccccccCCCCcHHHHHHHh-------CCHHHHHHHHhCCCC
Confidence            9873 33444433322111  000000    0000   11122346799999999998       778999999999999


Q ss_pred             CCCCCCCCCCCCCCCCChhhhhhhcccccccc--chhhhHHHHhhhccc----cccCCccceec
Q 037827          189 VQEEYNPHAHAHSENVDGDLEKQLSETSHSAF--GFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       189 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ++....-.........|.. ..+.+.+.+++.  ..++..+|+..|+|+    +.+.||||+|.
T Consensus       154 v~~~~~~~~~~~~~~~~~~-~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~  216 (743)
T TIGR00870       154 VPARACGDFFVKSQGVDSF-YHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLV  216 (743)
T ss_pred             CCcCcCCchhhcCCCCCcc-cccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHH
Confidence            9965422110000011110 011122222222  356667788889888    88999999995

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.53  E-value=3e-13  Score=103.63  Aligned_cols=124  Identities=23%  Similarity=0.224  Sum_probs=103.2

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      ++.+|++|||.|+..|+.+.++.|++. .. .... .+..|....++|+..++.+++++|++.|+++ +..|..|.||+|
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~-~~-~~~~-~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l~   78 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLEN-GA-DVNA-KDNDGRTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPLH   78 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHc-CC-CCCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHH
Confidence            467899999999999999999999987 22 2222 2456677888999999999999999999984 999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827          110 RAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL  183 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li  183 (263)
                      +|+..++.+++++|++++                   ...+..|..|.|||++|...       ++..+++.|+
T Consensus        79 ~a~~~~~~~~~~~L~~~~-------------------~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~Ll  126 (126)
T cd00204          79 LAARNGNLDVVKLLLKHG-------------------ADVNARDKDGRTPLHLAAKN-------GHLEVVKLLL  126 (126)
T ss_pred             HHHHcCcHHHHHHHHHcC-------------------CCCcccCCCCCCHHHHHHhc-------CCHHHHHHhC
Confidence            999999999999996432                   33566788999999999987       5668877664

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PHA02741 hypothetical protein; Provisional

Probab=99.52  E-value=6.1e-14  Score=116.75  Aligned_cols=109  Identities=17%  Similarity=0.110  Sum_probs=85.8

Q ss_pred             cCCcCHHHHHHHhCCcHHHHHHHHH------cCCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCCCCHH
Q 037827           67 VDQSSIFEFIVASTGKLELISTLIR------YEADLPNVRDEENLLPIHRAAKQGQR----NVVCYLLEKTRAPLDGSDD  136 (263)
Q Consensus        67 ~~~g~iv~~~AA~~G~~eiv~~Ll~------~ga~l~~~~d~~G~TPLh~Aa~~g~~----evv~~Ll~~~a~p~~~~~~  136 (263)
                      +..|..+.++||..|+.++++.|+.      .|+++ +.+|..|+||||+|+..|+.    +++++|+            
T Consensus        18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll------------   84 (169)
T PHA02741         18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLI------------   84 (169)
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHH------------
Confidence            3456778889999999999999854      36885 99999999999999999995    5666664            


Q ss_pred             HHHHHHHhCCCccccccC-CCchHHHHHhcCCCCCcCCcchHHHHHHcc-cCCCCCCCCCCCCCCCCC
Q 037827          137 VAYGLLRKHPKLAWAEIA-GTGKILELLSKRPKAFASGIRLGYWKGLLY-QWIPVQEEYNPHAHAHSE  202 (263)
Q Consensus       137 va~~Ll~~~~~~~~~~D~-~G~TPLHlAA~~~~~f~s~~~~~~~~~li~-~~~~v~~~~~~~~~~~~~  202 (263)
                            .. +..++.+|. +|.||||+|++.       ++.++++.|+. .+++++..+..+.++.+.
T Consensus        85 ------~~-gadin~~~~~~g~TpLh~A~~~-------~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~  138 (169)
T PHA02741         85 ------EL-GADINAQEMLEGDTALHLAAHR-------RDHDLAEWLCCQPGIDLHFCNADNKSPFEL  138 (169)
T ss_pred             ------Hc-CCCCCCCCcCCCCCHHHHHHHc-------CCHHHHHHHHhCCCCCCCcCCCCCCCHHHH
Confidence                  33 344677774 999999999997       67899999996 588888776555444443

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.49  E-value=1.7e-13  Score=114.00  Aligned_cols=98  Identities=17%  Similarity=0.082  Sum_probs=84.1

Q ss_pred             hhcccChHHHHHHHHcCCHHH---HHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHH-cCCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKG---LEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIR-YEADLPNVRDEEN  104 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~---v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~-~ga~l~~~~d~~G  104 (263)
                      .+|..|+||||+|+..|..+.   +++|++.  +..++......|....++|+..|+.+++++|++ .|+++ +.+|..|
T Consensus        52 ~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~--Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g  128 (166)
T PHA02743         52 RYDHHGRQCTHMVAWYDRANAVMKIELLVNM--GADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNL-GAINYQH  128 (166)
T ss_pred             ccCCCCCcHHHHHHHhCccCHHHHHHHHHHc--CCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCc-cCcCCCC
Confidence            467889999999999987654   7888876  455655522467888899999999999999995 79995 9999999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827          105 LLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       105 ~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      +||||+|+..|+.+++++|+.++++
T Consensus       129 ~tpL~~A~~~~~~~iv~~Ll~~ga~  153 (166)
T PHA02743        129 ETAYHIAYKMRDRRMMEILRANGAV  153 (166)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999999988875

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.45  E-value=7.6e-13  Score=133.54  Aligned_cols=130  Identities=15%  Similarity=0.074  Sum_probs=93.1

Q ss_pred             hhcccChHHHH-HHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHH----HHHHHHcCCC-----CCC
Q 037827           29 IKDIANYKQVT-RYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLEL----ISTLIRYEAD-----LPN   98 (263)
Q Consensus        29 ~~~~~~~t~Lh-~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~ei----v~~Ll~~ga~-----l~~   98 (263)
                      ..|..|+|||| .|+..++.++++.|++.  +.     .+..|+...+.|+. |+.+.    ++.+...+.+     .++
T Consensus        47 ~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~--g~-----~~~~G~T~Lh~A~~-~~~~~v~~ll~~l~~~~~~~~~~~~~~  118 (743)
T TIGR00870        47 CPDRLGRSALFVAAIENENLELTELLLNL--SC-----RGAVGDTLLHAISL-EYVDAVEAILLHLLAAFRKSGPLELAN  118 (743)
T ss_pred             CcCccchhHHHHHHHhcChHHHHHHHHhC--CC-----CCCcChHHHHHHHh-ccHHHHHHHHHHHhhcccccCchhhhc
Confidence            46678999999 78888889999988887  22     24456777787776 33333    3444443322     011


Q ss_pred             ----CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------------------------CCCCHHHHHHHHHhC
Q 037827           99 ----VRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP-----------------------------LDGSDDVAYGLLRKH  145 (263)
Q Consensus        99 ----~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p-----------------------------~~~~~~va~~Ll~~~  145 (263)
                          ..+..|.||||+||.+|+.++|++|+++|++.                             ..++.+++..|++. 
T Consensus       119 ~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~-  197 (743)
T TIGR00870       119 DQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED-  197 (743)
T ss_pred             cccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC-
Confidence                22357999999999999999999999999862                             12345566666654 


Q ss_pred             CCccccccCCCchHHHHHhcCC
Q 037827          146 PKLAWAEIAGTGKILELLSKRP  167 (263)
Q Consensus       146 ~~~~~~~D~~G~TPLHlAA~~~  167 (263)
                      ++.++.+|..|+||||+|+..+
T Consensus       198 gadin~~d~~g~T~Lh~A~~~~  219 (743)
T TIGR00870       198 PADILTADSLGNTLLHLLVMEN  219 (743)
T ss_pred             CcchhhHhhhhhHHHHHHHhhh
Confidence            6678899999999999999874

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.44  E-value=2.2e-13  Score=111.35  Aligned_cols=98  Identities=12%  Similarity=-0.047  Sum_probs=84.1

Q ss_pred             hhcccChHHHHHHHHcCCHH---HHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHH-cCCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWK---GLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIR-YEADLPNVRDEEN  104 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e---~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~-~ga~l~~~~d~~G  104 (263)
                      ..|.+|+||||.|+..|+.+   .++.|++.  +..++......|.+..++|+..|+.+++++|+. .|+++ +.+|..|
T Consensus        50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~--gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~-n~~~~~g  126 (154)
T PHA02736         50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEW--GADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNM-EILNYAF  126 (154)
T ss_pred             HhcCCCCEEEEeecccCchhHHHHHHHHHHc--CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC-ccccCCC
Confidence            45778999999999999874   57788876  455655533467888999999999999999998 49995 9999999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827          105 LLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       105 ~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      +||||+|+..|+.+++++|+..|++
T Consensus       127 ~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736        127 KTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999999998875

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.43  E-value=5.2e-13  Score=125.84  Aligned_cols=165  Identities=12%  Similarity=0.040  Sum_probs=110.6

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      .-+.+|.|+||.++...+.++|+++++.  +..++.. +..+.+..+.||..|+..++++|+.+|+++ -+.|.+|..|+
T Consensus        68 ~~n~DglTalhq~~id~~~e~v~~l~e~--ga~Vn~~-d~e~wtPlhaaascg~~~i~~~li~~gA~~-~avNsdg~~P~  143 (527)
T KOG0505|consen   68 LCNVDGLTALHQACIDDNLEMVKFLVEN--GANVNAQ-DNEGWTPLHAAASCGYLNIVEYLIQHGANL-LAVNSDGNMPY  143 (527)
T ss_pred             ccCCccchhHHHHHhcccHHHHHHHHHh--cCCcccc-ccccCCcchhhcccccHHHHHHHHHhhhhh-hhccCCCCCcc
Confidence            4567788888888888888888888876  4566555 445566667788888888888888888874 66666665555


Q ss_pred             HHHHHcCCH--------------H------------HHHHHHhCCCC-----C----------CCCCHHHHHHHHHhCCC
Q 037827          109 HRAAKQGQR--------------N------------VVCYLLEKTRA-----P----------LDGSDDVAYGLLRKHPK  147 (263)
Q Consensus       109 h~Aa~~g~~--------------e------------vv~~Ll~~~a~-----p----------~~~~~~va~~Ll~~~~~  147 (263)
                      -++..---.              +            =++..+..|.+     +          ..|+.+++..|++.+ .
T Consensus       144 dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag-~  222 (527)
T KOG0505|consen  144 DLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAG-Y  222 (527)
T ss_pred             ccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhc-c
Confidence            433211100              0            01111223332     0          455556665556654 4


Q ss_pred             ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCC
Q 037827          148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVD  205 (263)
Q Consensus       148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~  205 (263)
                      .++.+|.+|+||||.||..       +.-+..+.|+.+|++.+....-+..+.....+
T Consensus       223 ~~~~~D~dgWtPlHAAA~W-------g~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  223 SVNIKDYDGWTPLHAAAHW-------GQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             CcccccccCCCcccHHHHh-------hhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            4789999999999999987       66799999999999999887555554433333

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.42  E-value=1.5e-13  Score=121.45  Aligned_cols=129  Identities=17%  Similarity=0.063  Sum_probs=105.0

Q ss_pred             HHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 037827           39 TRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRN  118 (263)
Q Consensus        39 h~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~e  118 (263)
                      +--|+.|+--.|+..++. ....++.- ++.|....+|||..|+..+|++|+.+|+.+ |..|....||||+|+.+||.+
T Consensus         5 f~wcregna~qvrlwld~-tehdln~g-ddhgfsplhwaakegh~aivemll~rgarv-n~tnmgddtplhlaaahghrd   81 (448)
T KOG0195|consen    5 FGWCREGNAFQVRLWLDD-TEHDLNVG-DDHGFSPLHWAAKEGHVAIVEMLLSRGARV-NSTNMGDDTPLHLAAAHGHRD   81 (448)
T ss_pred             hhhhhcCCeEEEEEEecC-cccccccc-cccCcchhhhhhhcccHHHHHHHHhccccc-ccccCCCCcchhhhhhcccHH
Confidence            344677776666666665 44455444 455677788999999999999999999995 999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC
Q 037827          119 VVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       119 vv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~  196 (263)
                      +|+.|+                  +. .+.+++.+..|.||||+|+-.       |.-.+.+-|+..|+.|+..+..+
T Consensus        82 ivqkll------------------~~-kadvnavnehgntplhyacfw-------gydqiaedli~~ga~v~icnk~g  133 (448)
T KOG0195|consen   82 IVQKLL------------------SR-KADVNAVNEHGNTPLHYACFW-------GYDQIAEDLISCGAAVNICNKKG  133 (448)
T ss_pred             HHHHHH------------------HH-hcccchhhccCCCchhhhhhh-------cHHHHHHHHHhccceeeecccCC
Confidence            999985                  33 456899999999999999987       56689999999999888776433

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.40  E-value=2.9e-13  Score=92.67  Aligned_cols=55  Identities=29%  Similarity=0.289  Sum_probs=30.6

Q ss_pred             HHHcC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHH
Q 037827           89 LIRYE-ADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELL  163 (263)
Q Consensus        89 Ll~~g-a~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlA  163 (263)
                      |+++| ++ ++.+|..|+||||+||.+|+.++|++|+                   +.+..++.+|.+|+||||+|
T Consensus         1 LL~~~~~~-~n~~d~~G~T~LH~A~~~g~~~~v~~Ll-------------------~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPAD-VNAQDKYGNTPLHWAARYGHSEVVRLLL-------------------QNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T---TT---TTS--HHHHHHHHT-HHHHHHHH-------------------HCT--TT---TTS--HHHH-
T ss_pred             CCccCcCC-CcCcCCCCCcHHHHHHHcCcHHHHHHHH-------------------HCcCCCCCCcCCCCCHHHhC
Confidence            67788 67 5999999999999999999999999994                   34556789999999999987

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.38  E-value=8e-13  Score=128.70  Aligned_cols=180  Identities=17%  Similarity=0.143  Sum_probs=144.9

Q ss_pred             ccccchhhcccCCCCCCCCCchh----hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHh
Q 037827            4 DEVTTAQEESDDGNNKTPNTKDE----KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVAS   79 (263)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~   79 (263)
                      +++|...-+..+|++.-+..+.+    ....+..|.+|||+|++.|+.++++.++.+ + +.+++. +..|++-.+.||+
T Consensus        48 ~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q-~-d~~na~-~~e~~tplhlaaq  124 (854)
T KOG0507|consen   48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQ-T-DILNAV-NIENETPLHLAAQ  124 (854)
T ss_pred             cchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhc-c-cCCCcc-cccCcCccchhhh
Confidence            45566666667777766655555    245678899999999999999999999998 3 444443 5566788889999


Q ss_pred             CCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC------------C-----------CCCCHH
Q 037827           80 TGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRA------------P-----------LDGSDD  136 (263)
Q Consensus        80 ~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~------------p-----------~~~~~~  136 (263)
                      .|+.+++.+|+.+|++ +..+|+.+.|+|-+|++.|+.++|+.|++..-.            +           .+|+.+
T Consensus       125 hgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~  203 (854)
T KOG0507|consen  125 HGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVE  203 (854)
T ss_pred             hcchHHHHHHHhcCCC-ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHH
Confidence            9999999999999999 699999999999999999999999999976221            0           788999


Q ss_pred             HHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC
Q 037827          137 VAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       137 va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~  196 (263)
                      ++..|+..+-+ ++... +.-|+||-||..       |..+++..|+..|+.+...++-+
T Consensus       204 ~~~~ll~ag~d-in~~t-~~gtalheaalc-------gk~evvr~ll~~gin~h~~n~~~  254 (854)
T KOG0507|consen  204 CMQALLEAGFD-INYTT-EDGTALHEAALC-------GKAEVVRFLLEIGINTHIKNQHG  254 (854)
T ss_pred             HHHHHHhcCCC-ccccc-ccchhhhhHhhc-------CcchhhhHHHhhccccccccccc
Confidence            99998887434 44443 445999999987       67799999999999888886543

>PHA02792 ankyrin-like protein; Provisional

Probab=99.37  E-value=4e-12  Score=124.41  Aligned_cols=134  Identities=11%  Similarity=0.028  Sum_probs=89.6

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc--CHHHHHHHhCCcH---HHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS--SIFEFIVASTGKL---ELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g--~iv~~~AA~~G~~---eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ....++.||..|+.++|+.|++.  +..++.. +..|  ....++|+..+..   +++++|+++|+++ +.+|..|+|||
T Consensus       339 ~~n~~~~Aa~~gn~eIVelLIs~--GADIN~k-D~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADI-N~kD~~G~TPL  414 (631)
T PHA02792        339 HINKYFQKFDNRDPKVVEYILKN--GNVVVED-DDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDI-NKIDKHGRSIL  414 (631)
T ss_pred             cchHHHHHHHcCCHHHHHHHHHc--CCchhhh-cCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcc-ccccccCcchH
Confidence            45567777888888888888876  3445444 2232  3444555554443   3567777888884 88888888888


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCc---CCcchHHHHHHccc
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFA---SGIRLGYWKGLLYQ  185 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~---s~~~~~~~~~li~~  185 (263)
                      |+|+..++.+++++|++                  . ++.++.+|..|.||||+|+..-..+.   .....++++.+++.
T Consensus       415 h~Aa~~~n~eivelLLs------------------~-GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~  475 (631)
T PHA02792        415 YYCIESHSVSLVEWLID------------------N-GADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSK  475 (631)
T ss_pred             HHHHHcCCHHHHHHHHH------------------C-CCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhc
Confidence            88888888888877753                  3 44578899999999999976211100   01235778889988


Q ss_pred             CCCCC
Q 037827          186 WIPVQ  190 (263)
Q Consensus       186 ~~~v~  190 (263)
                      +.+++
T Consensus       476 ~p~i~  480 (631)
T PHA02792        476 LPTIE  480 (631)
T ss_pred             CCChh
Confidence            86665

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.35  E-value=2.7e-12  Score=95.80  Aligned_cols=89  Identities=18%  Similarity=0.232  Sum_probs=78.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      ..+.+++.+|.++.|+..+..  +.+++...  +|+...++||-.|.+++++||+..|+++ +.+|+.|-|||.-|+-.|
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~--g~nVn~~~--ggR~plhyAAD~GQl~ilefli~iGA~i-~~kDKygITPLLsAvwEG   78 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNE--GLNVNEIY--GGRTPLHYAADYGQLSILEFLISIGANI-QDKDKYGITPLLSAVWEG   78 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHc--cccHHHHh--CCcccchHhhhcchHHHHHHHHHhcccc-CCccccCCcHHHHHHHHh
Confidence            346789999999999999987  24555443  6688889999999999999999999995 999999999999999999


Q ss_pred             CHHHHHHHHhCCCC
Q 037827          116 QRNVVCYLLEKTRA  129 (263)
Q Consensus       116 ~~evv~~Ll~~~a~  129 (263)
                      |.++|++|+++|++
T Consensus        79 H~~cVklLL~~GAd   92 (117)
T KOG4214|consen   79 HRDCVKLLLQNGAD   92 (117)
T ss_pred             hHHHHHHHHHcCcc
Confidence            99999999988876

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.31  E-value=3e-11  Score=101.26  Aligned_cols=127  Identities=23%  Similarity=0.187  Sum_probs=106.1

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCc-----HHHHHHHHHcCC--CCCCCCCCC
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGK-----LELISTLIRYEA--DLPNVRDEE  103 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~-----~eiv~~Ll~~ga--~l~~~~d~~  103 (263)
                      +..+.++++.++..|+.+.++.++..  +..++.. +..|....++|+..|+     .+++++|++.|+  +..+.+|..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~  146 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLAS--GADVNAK-DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED  146 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHHc--CCCcccc-cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence            34478999999999999999888887  3344333 6677888899999999     999999999999  556888999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827          104 NLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL  183 (263)
Q Consensus       104 G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li  183 (263)
                      |+||||+|+..|+.+++++|+..++                   .+..++..|.|||+.|+..       ++..+++.++
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~~~~-------------------~~~~~~~~g~t~l~~a~~~-------~~~~~~~~l~  200 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLEAGA-------------------DPNSRNSYGVTALDPAAKN-------GRIELVKLLL  200 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHhcCC-------------------CCcccccCCCcchhhhccc-------chHHHHHHHH
Confidence            9999999999999999999975433                   3455689999999999987       6678888888


Q ss_pred             ccC
Q 037827          184 YQW  186 (263)
Q Consensus       184 ~~~  186 (263)
                      ..+
T Consensus       201 ~~~  203 (235)
T COG0666         201 DKG  203 (235)
T ss_pred             hcC
Confidence            765

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.30  E-value=6.4e-12  Score=85.05  Aligned_cols=52  Identities=37%  Similarity=0.571  Sum_probs=42.5

Q ss_pred             HHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 037827           72 IFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLL  124 (263)
Q Consensus        72 iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll  124 (263)
                      ...++||..|+.+++++|+++|+++ +.+|.+|+||||+|+.+|+.+++++|+
T Consensus         3 t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    3 TPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             BHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             hHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            3456899999999999999999995 999999999999999999999999996

...

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=7.3e-12  Score=117.92  Aligned_cols=88  Identities=20%  Similarity=0.230  Sum_probs=75.9

Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCH
Q 037827           38 VTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQR  117 (263)
Q Consensus        38 Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~  117 (263)
                      |..|+..|.++.|+.++..  -.+. +.-++.|-+..|-|...||.+||+|||+.|+++ |+.|.+|||||||||.++++
T Consensus       554 LLDaaLeGEldlVq~~i~e--v~Dp-SqpNdEGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNnv  629 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYE--VTDP-SQPNDEGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNNV  629 (752)
T ss_pred             HHhhhhcchHHHHHHHHHh--hcCC-CCCCccchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCch
Confidence            5678999999999999986  1222 222556678888999999999999999999995 99999999999999999999


Q ss_pred             HHHHHHHhCCCC
Q 037827          118 NVVCYLLEKTRA  129 (263)
Q Consensus       118 evv~~Ll~~~a~  129 (263)
                      .||+.|+..|+.
T Consensus       630 ~~ckqLVe~Gaa  641 (752)
T KOG0515|consen  630 PMCKQLVESGAA  641 (752)
T ss_pred             HHHHHHHhccce
Confidence            999999988874

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.28  E-value=1.8e-11  Score=122.26  Aligned_cols=83  Identities=25%  Similarity=0.121  Sum_probs=75.6

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAG  155 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~  155 (263)
                      .||..|+.+++++|++.|+++ +.+|..|+||||+||.+|+.++|++|++.|                   ..++.+|.+
T Consensus        88 ~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-------------------advn~~d~~  147 (664)
T PTZ00322         88 QLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFG-------------------ADPTLLDKD  147 (664)
T ss_pred             HHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHCC-------------------CCCCCCCCC
Confidence            789999999999999999995 999999999999999999999999996543                   346788999


Q ss_pred             CchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827          156 TGKILELLSKRPKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       156 G~TPLHlAA~~~~~f~s~~~~~~~~~li~~  185 (263)
                      |.||||+|+.+       ++.++++.|+.+
T Consensus       148 G~TpLh~A~~~-------g~~~iv~~Ll~~  170 (664)
T PTZ00322        148 GKTPLELAEEN-------GFREVVQLLSRH  170 (664)
T ss_pred             CCCHHHHHHHC-------CcHHHHHHHHhC
Confidence            99999999987       778999999988

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.26  E-value=1e-11  Score=124.83  Aligned_cols=205  Identities=15%  Similarity=0.136  Sum_probs=141.1

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc-------------CHHHH--------------------H
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS-------------SIFEF--------------------I   76 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g-------------~iv~~--------------------~   76 (263)
                      +|..|++||..|+-.|+...|..|++.  ...+.+.-++.+             ++|+.                    +
T Consensus       786 rdkkgf~plImaatagh~tvV~~llk~--ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsl  863 (2131)
T KOG4369|consen  786 RDKKGFVPLIMAATAGHITVVQDLLKA--HADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSL  863 (2131)
T ss_pred             cccccchhhhhhcccCchHHHHHHHhh--hhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhh
Confidence            566788888888888888888888875  222222211111             33333                    7


Q ss_pred             HHhCCcHHHHHHHHHcCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhCCCC-----C-----------CCCCHHHH
Q 037827           77 VASTGKLELISTLIRYEADLPNVRD--EENLLPIHRAAKQGQRNVVCYLLEKTRA-----P-----------LDGSDDVA  138 (263)
Q Consensus        77 AA~~G~~eiv~~Ll~~ga~l~~~~d--~~G~TPLh~Aa~~g~~evv~~Ll~~~a~-----p-----------~~~~~~va  138 (263)
                      |+.-|++++|..|+..|+++ +.+.  +.|-.||.+|+.+||.+.++.|+..|.+     +           ..+..+++
T Consensus       864 a~Sggy~~iI~~llS~GseI-nSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv  942 (2131)
T KOG4369|consen  864 ARSGGYTKIIHALLSSGSEI-NSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVV  942 (2131)
T ss_pred             hcCcchHHHHHHHhhccccc-ccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHH
Confidence            77888888888888888774 6553  4677888888888888888888887775     1           56778888


Q ss_pred             HHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC--CCCCCCCCChhhhhhhcccc
Q 037827          139 YGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH--AHAHSENVDGDLEKQLSETS  216 (263)
Q Consensus       139 ~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~  216 (263)
                      ..||....+ +..+-+.|.|||.-+|.       +|.+++=..||..|++++....|.  .+++..+++.--        
T Consensus       943 ~lLLa~~an-vehRaktgltplme~As-------gGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh-------- 1006 (2131)
T KOG4369|consen  943 FLLLAAQAN-VEHRAKTGLTPLMEMAS-------GGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGH-------- 1006 (2131)
T ss_pred             HHHHHHhhh-hhhhcccCCcccchhhc-------CCccccchhhhhcccccccCCCCCcCCccceeecCCCc--------
Confidence            888877443 56678999999998886       478899999999999999887554  333333333332        


Q ss_pred             ccccchhhhHHHHhhhccc----cccCCccceeccccccCchhhhh
Q 037827          217 HSAFGFELAYLLLHWFVSF----RVSTTPLTLATNDVRLPHSKIQY  258 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  258 (263)
                           ...--+|+++.|.-    |.|-|||-+|.++.-|-.-.|-|
T Consensus      1007 -----~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~ 1047 (2131)
T KOG4369|consen 1007 -----TKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILV 1047 (2131)
T ss_pred             -----hhhhHHhhCCccceecccCCCCcccchhccCCccccchHHh
Confidence                 12233556654444    66778888888777765544433

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.17  E-value=1.6e-10  Score=115.44  Aligned_cols=88  Identities=18%  Similarity=0.262  Sum_probs=79.2

Q ss_pred             hHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q 037827           35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ  114 (263)
Q Consensus        35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~  114 (263)
                      ..+|+.|+..|+.+.++.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..
T Consensus        83 ~~~L~~aa~~G~~~~vk~LL~~--Gadin~~-d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~  158 (664)
T PTZ00322         83 TVELCQLAASGDAVGARILLTG--GADPNCR-DYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEEN  158 (664)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHC
Confidence            3569999999999999999987  3455554 566788999999999999999999999995 99999999999999999


Q ss_pred             CCHHHHHHHHhC
Q 037827          115 GQRNVVCYLLEK  126 (263)
Q Consensus       115 g~~evv~~Ll~~  126 (263)
                      |+.+++++|+.+
T Consensus       159 g~~~iv~~Ll~~  170 (664)
T PTZ00322        159 GFREVVQLLSRH  170 (664)
T ss_pred             CcHHHHHHHHhC
Confidence            999999999987

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.17  E-value=1.4e-10  Score=114.17  Aligned_cols=130  Identities=15%  Similarity=0.088  Sum_probs=103.8

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCccccccc-------CC---------------cCHHHHHHHhCCcHHHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIV-------DQ---------------SSIFEFIVASTGKLELI   86 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~-------~~---------------g~iv~~~AA~~G~~eiv   86 (263)
                      .....|.|+||.|+.+-|.+.|+.|++.  ++++++.-.       +.               |+...-+||..++.|++
T Consensus       179 ~eeY~GqSaLHiAIv~~~~~~V~lLl~~--gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eiv  256 (782)
T KOG3676|consen  179 SEEYYGQSALHIAIVNRDAELVRLLLAA--GADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIV  256 (782)
T ss_pred             hHhhcCcchHHHHHHhccHHHHHHHHHc--CCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHH
Confidence            3445799999999999999999999997  455554311       11               02222399999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827           87 STLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus        87 ~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      ++|+++||| ++++|..|+|.||.-+.+-..+|..++++.|++                 .+...+|+.|.|||-+||+-
T Consensus       257 rlLl~~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~-----------------~l~~v~N~qgLTPLtLAakl  318 (782)
T KOG3676|consen  257 RLLLAHGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN-----------------ALEHVRNNQGLTPLTLAAKL  318 (782)
T ss_pred             HHHHhcCCC-CCccccCCChHHHHHHHHHHHHHHHHHHhcCCC-----------------ccccccccCCCChHHHHHHh
Confidence            999999999 599999999999999999888888888765542                 34567799999999999997


Q ss_pred             CCCCcCCcchHHHHHHccc
Q 037827          167 PKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       167 ~~~f~s~~~~~~~~~li~~  185 (263)
                             |+.++.+.++..
T Consensus       319 -------Gk~emf~~ile~  330 (782)
T KOG3676|consen  319 -------GKKEMFQHILER  330 (782)
T ss_pred             -------hhHHHHHHHHHh
Confidence                   667777777655

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.15  E-value=6.9e-11  Score=111.46  Aligned_cols=106  Identities=21%  Similarity=0.176  Sum_probs=87.8

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAG  155 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~  155 (263)
                      -||..|..|+|+-.+..--| +...|.+|-||||-|+..||.+||+|||..                   +..+|+.|.+
T Consensus       556 DaaLeGEldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~-------------------ganVNa~DSd  615 (752)
T KOG0515|consen  556 DAALEGELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEF-------------------GANVNAADSD  615 (752)
T ss_pred             hhhhcchHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhc-------------------CCcccCccCC
Confidence            69999999999999988888 589999999999999999999999999754                   3447899999


Q ss_pred             CchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC-CCCCCCCCChhhh
Q 037827          156 TGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH-AHAHSENVDGDLE  209 (263)
Q Consensus       156 G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~-~~~~~~~~~~~~~  209 (263)
                      |+||||.||..       .++-+++.|+..|+.|=+..-.. .++. +.|++..|
T Consensus       616 GWTPLHCAASC-------Nnv~~ckqLVe~GaavfAsTlSDmeTa~-eKCee~ee  662 (752)
T KOG0515|consen  616 GWTPLHCAASC-------NNVPMCKQLVESGAAVFASTLSDMETAA-EKCEEMEE  662 (752)
T ss_pred             CCchhhhhhhc-------CchHHHHHHHhccceEEeeecccccchh-hhcchhhh
Confidence            99999999987       67899999999998776554222 3332 56766643

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.13  E-value=1.3e-10  Score=78.55  Aligned_cols=54  Identities=28%  Similarity=0.223  Sum_probs=41.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827          104 NLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL  183 (263)
Q Consensus       104 G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li  183 (263)
                      |+||||+|+..|+.+++++|+++                   +..++.+|.+|.||||+|+.+       ++.++++.||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~-------------------~~din~~d~~g~t~lh~A~~~-------g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEH-------------------GADINAQDEDGRTPLHYAAKN-------GNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHT-------------------TSGTT-B-TTS--HHHHHHHT-------T-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHC-------------------CCCCCCCCCCCCCHHHHHHHc-------cCHHHHHHHC
Confidence            78999999999999999999643                   334677899999999999998       6789998875

...

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.10  E-value=3.1e-09  Score=89.01  Aligned_cols=114  Identities=18%  Similarity=0.100  Sum_probs=94.8

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQ-----RNVVCYLLEKTRAPLDGSDDVAYGLLRKH  145 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~-----~evv~~Ll~~~a~p~~~~~~va~~Ll~~~  145 (263)
                      ....++|+..+..+++++|+..|+++ +.+|.+|.||||+|+..|+     .+++++|+..+++                
T Consensus        74 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~----------------  136 (235)
T COG0666          74 RLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD----------------  136 (235)
T ss_pred             cCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCC----------------
Confidence            44556999999999999999999995 9999999999999999999     8999998654432                


Q ss_pred             CCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827          146 PKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL  208 (263)
Q Consensus       146 ~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  208 (263)
                      ....+.+|.+|.||||+|+..       ++..+++.++..+++++..+..+.++.+.++....
T Consensus       137 ~~~~~~~~~~g~tpl~~A~~~-------~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~  192 (235)
T COG0666         137 LDVNNLRDEDGNTPLHWAALN-------GDADIVELLLEAGADPNSRNSYGVTALDPAAKNGR  192 (235)
T ss_pred             CCCccccCCCCCchhHHHHHc-------CchHHHHHHHhcCCCCcccccCCCcchhhhcccch
Confidence            145677799999999999998       55699999999999999887666666666555443

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.07  E-value=2.9e-10  Score=85.03  Aligned_cols=104  Identities=15%  Similarity=0.034  Sum_probs=82.4

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAG  155 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~  155 (263)
                      |+..+|..+-|+..+..|-++ +.. ..|+||||+||-+|+.++.+||++.|                   +.++.+|+.
T Consensus         8 W~vkNG~~DeVk~~v~~g~nV-n~~-~ggR~plhyAAD~GQl~ilefli~iG-------------------A~i~~kDKy   66 (117)
T KOG4214|consen    8 WNVKNGEIDEVKQSVNEGLNV-NEI-YGGRTPLHYAADYGQLSILEFLISIG-------------------ANIQDKDKY   66 (117)
T ss_pred             hhhccCcHHHHHHHHHccccH-HHH-hCCcccchHhhhcchHHHHHHHHHhc-------------------cccCCcccc
Confidence            899999999999999999774 543 38999999999999999999997543                   346788999


Q ss_pred             CchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827          156 TGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL  208 (263)
Q Consensus       156 G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  208 (263)
                      |-|||--|...       |+...++.|+..|++.-.. .|.....-++.++++
T Consensus        67 gITPLLsAvwE-------GH~~cVklLL~~GAdrt~~-~PdG~~~~eate~ed  111 (117)
T KOG4214|consen   67 GITPLLSAVWE-------GHRDCVKLLLQNGADRTIH-APDGTALIEATEEED  111 (117)
T ss_pred             CCcHHHHHHHH-------hhHHHHHHHHHcCccccee-CCCchhHHhhccHHH
Confidence            99999655554       8889999999999875544 555444445555554

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.07  E-value=2.5e-10  Score=115.11  Aligned_cols=148  Identities=15%  Similarity=0.111  Sum_probs=123.1

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCC-CCCCCCcHHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNV-RDEENLLPIHRAA  112 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~-~d~~G~TPLh~Aa  112 (263)
                      -.|+|-.||..|+.|+|+.|+..  +..+.-. ++.|.+..-+||-.||..+|+.|+++.+++ ++ .|..+.|+|-+||
T Consensus       757 ~~t~LT~acaggh~e~vellv~r--ganiehr-dkkgf~plImaatagh~tvV~~llk~ha~v-eaQsdrtkdt~lSlac  832 (2131)
T KOG4369|consen  757 IKTNLTSACAGGHREEVELLVVR--GANIEHR-DKKGFVPLIMAATAGHITVVQDLLKAHADV-EAQSDRTKDTMLSLAC  832 (2131)
T ss_pred             ccccccccccCccHHHHHHHHHh--ccccccc-ccccchhhhhhcccCchHHHHHHHhhhhhh-hhhcccccCceEEEec
Confidence            46889999999999999999987  3444333 555555555899999999999999999996 65 4789999999999


Q ss_pred             HcCCHHHHHHHHhCCCC----------C-----CCCCHHHHHHHHHhCCCccccc--cCCCchHHHHHhcCCCCCcCCcc
Q 037827          113 KQGQRNVVCYLLEKTRA----------P-----LDGSDDVAYGLLRKHPKLAWAE--IAGTGKILELLSKRPKAFASGIR  175 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~----------p-----~~~~~~va~~Ll~~~~~~~~~~--D~~G~TPLHlAA~~~~~f~s~~~  175 (263)
                      ..|+.++|++||..|++          |     ..++..++..|+..+.. ++.+  -+-|..||.+|+.+       ++
T Consensus       833 sggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~Gse-InSrtgSklgisPLmlatmn-------gh  904 (2131)
T KOG4369|consen  833 SGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSE-INSRTGSKLGISPLMLATMN-------GH  904 (2131)
T ss_pred             CCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccc-cccccccccCcchhhhhhhc-------cc
Confidence            99999999999999996          1     67888999989887544 4544  57899999999998       56


Q ss_pred             hHHHHHHcccCCCCCCCC
Q 037827          176 LGYWKGLLYQWIPVQEEY  193 (263)
Q Consensus       176 ~~~~~~li~~~~~v~~~~  193 (263)
                      ..-++.|+..|.+||+.-
T Consensus       905 ~~at~~ll~~gsdiNaqI  922 (2131)
T KOG4369|consen  905 QAATLSLLQPGSDINAQI  922 (2131)
T ss_pred             cHHHHHHhcccchhcccc
Confidence            688999999999998874

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.05  E-value=1.7e-09  Score=82.60  Aligned_cols=100  Identities=29%  Similarity=0.313  Sum_probs=84.6

Q ss_pred             CCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q 037827           68 DQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPK  147 (263)
Q Consensus        68 ~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~  147 (263)
                      ..|....++|+..|+.+++++|++.|++. +.++..|.||||.|+..+..+++++|+..++                   
T Consensus         5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-------------------   64 (126)
T cd00204           5 EDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA-------------------   64 (126)
T ss_pred             cCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-------------------
Confidence            34567778999999999999999999995 8999999999999999999999999975332                   


Q ss_pred             ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCC
Q 037827          148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYN  194 (263)
Q Consensus       148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~  194 (263)
                      ..+..+..|.||+|.|++.       ++.++++.|+..+.+++..+.
T Consensus        65 ~~~~~~~~~~~~l~~a~~~-------~~~~~~~~L~~~~~~~~~~~~  104 (126)
T cd00204          65 DVNARDKDGNTPLHLAARN-------GNLDVVKLLLKHGADVNARDK  104 (126)
T ss_pred             CccccCCCCCCHHHHHHHc-------CcHHHHHHHHHcCCCCcccCC
Confidence            3456678999999999997       568999999998866666653

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.01  E-value=2.8e-09  Score=94.45  Aligned_cols=112  Identities=14%  Similarity=0.098  Sum_probs=90.5

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA  112 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa  112 (263)
                      +-..||..++.+|+.+.+..||+.  ...++.. +..|-.+..-||.+|+.++|+.|++.|+|+-..++..+.||||+||
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~--vr~vn~~-D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA   87 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLST--VRQVNQR-DPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAA   87 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHH--hhhhhcc-CCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence            346899999999999999999986  2234333 6677777778999999999999999999975566789999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827          113 KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      .+|+.+++++|++.|+.                   ....|.-|+|+-.+||--
T Consensus        88 LSGn~dvcrllldaGa~-------------------~~~vNsvgrTAaqmAAFV  122 (396)
T KOG1710|consen   88 LSGNQDVCRLLLDAGAR-------------------MYLVNSVGRTAAQMAAFV  122 (396)
T ss_pred             HcCCchHHHHHHhccCc-------------------cccccchhhhHHHHHHHh
Confidence            99999999999876553                   233455677777777765

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.96  E-value=1.8e-09  Score=98.26  Aligned_cols=111  Identities=16%  Similarity=0.067  Sum_probs=94.4

Q ss_pred             cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHhCCCC-----C------
Q 037827           67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ-----GQRNVVCYLLEKTRA-----P------  130 (263)
Q Consensus        67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~-----g~~evv~~Ll~~~a~-----p------  130 (263)
                      +.+|.+..|||+.++|.++|+.|++.|..-++.+|+.|.||+++|+..     .+.++|..|+..|.-     .      
T Consensus       265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTAL  344 (452)
T KOG0514|consen  265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTAL  344 (452)
T ss_pred             cCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhh
Confidence            445566666999999999999999998755799999999999999874     468899999988863     1      


Q ss_pred             ----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827          131 ----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       131 ----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~  185 (263)
                          ..|..++++.||.- ++.+|++|.+|.|+|..||.+       |+.++++.|+..
T Consensus       345 MLAVSHGr~d~vk~LLac-gAdVNiQDdDGSTALMCA~EH-------GhkEivklLLA~  395 (452)
T KOG0514|consen  345 MLAVSHGRVDMVKALLAC-GADVNIQDDDGSTALMCAAEH-------GHKEIVKLLLAV  395 (452)
T ss_pred             hhhhhcCcHHHHHHHHHc-cCCCccccCCccHHHhhhhhh-------ChHHHHHHHhcc
Confidence                67889999988875 566899999999999999998       788999999865

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=98.94  E-value=9.5e-10  Score=75.09  Aligned_cols=55  Identities=22%  Similarity=0.291  Sum_probs=31.3

Q ss_pred             HhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           54 IMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        54 l~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      |+. .+..++.. +..|.++.++||+.|+.++|++|++.|+++ +.+|.+|+||||+|
T Consensus         2 L~~-~~~~~n~~-d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    2 LEH-GPADVNAQ-DKYGNTPLHWAARYGHSEVVRLLLQNGADP-NAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT----TTS--HHHHHHHHT-HHHHHHHHHCT--T-T---TTS--HHHH-
T ss_pred             Ccc-CcCCCcCc-CCCCCcHHHHHHHcCcHHHHHHHHHCcCCC-CCCcCCCCCHHHhC
Confidence            444 33445444 667789999999999999999999999995 99999999999997

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.86  E-value=5.4e-09  Score=103.13  Aligned_cols=131  Identities=18%  Similarity=0.121  Sum_probs=107.3

Q ss_pred             hcccChHHHHHHHH---cCCHHHHHHHHhccCCCcccccccCC---cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC--
Q 037827           30 KDIANYKQVTRYLL---EDDWKGLEDYIMSKTPNALACIIVDQ---SSIFEFIVASTGKLELISTLIRYEADLPNVRD--  101 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~---~G~~e~v~~Ll~~~~~~~~~~~i~~~---g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d--  101 (263)
                      ....|.|.||.|+.   .+.-++++.|++- .|..++....++   |..+.|+|..+.+.++|+.|++.|||+ +++-  
T Consensus       139 RGa~GET~Lh~~lL~~~~~~n~la~~LL~~-~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV-~aRa~G  216 (782)
T KOG3676|consen  139 RGATGETLLHKALLNLSDGHNELARVLLEI-FPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADV-HARACG  216 (782)
T ss_pred             ccchhhhHHHHHHhcCchhHHHHHHHHHHH-hHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCch-hhHhhc
Confidence            46678999999987   3455889999998 888777664443   578889999999999999999999994 6531  


Q ss_pred             ---------------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHH
Q 037827          102 ---------------------EENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKIL  160 (263)
Q Consensus       102 ---------------------~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPL  160 (263)
                                           ..|..||-+||.-++.|+|++|+.                   ++++++++|.+|+|.|
T Consensus       217 ~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~-------------------~gAd~~aqDS~GNTVL  277 (782)
T KOG3676|consen  217 AFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA-------------------HGADPNAQDSNGNTVL  277 (782)
T ss_pred             cccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh-------------------cCCCCCccccCCChHH
Confidence                                 137899999999999999999963                   3556899999999999


Q ss_pred             HHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          161 ELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       161 HlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      |+....       -..+..+.++..|++
T Consensus       278 H~lVi~-------~~~~My~~~L~~ga~  298 (782)
T KOG3676|consen  278 HMLVIH-------FVTEMYDLALELGAN  298 (782)
T ss_pred             HHHHHH-------HHHHHHHHHHhcCCC
Confidence            987765       456788888888888

>PF13606 Ank_3: Ankyrin repeat

Probab=98.69  E-value=2.1e-08  Score=59.78  Aligned_cols=27  Identities=37%  Similarity=0.548  Sum_probs=25.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827          103 ENLLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       103 ~G~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      +|+||||+||..|+.++|++|+++|++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad   27 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGAD   27 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            599999999999999999999999876

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=98.65  E-value=1e-07  Score=84.60  Aligned_cols=99  Identities=10%  Similarity=-0.002  Sum_probs=85.4

Q ss_pred             hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827           27 KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL  106 (263)
Q Consensus        27 ~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T  106 (263)
                      ....|..|+++|-.|+.+|++++|+.+|+.  +.+++......+.+..+|||.+|+.++.++|++.|+. +...|.-|+|
T Consensus        38 vn~~D~sGMs~LahAaykGnl~~v~lll~~--gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~-~~~vNsvgrT  114 (396)
T KOG1710|consen   38 VNQRDPSGMSVLAHAAYKGNLTLVELLLEL--GADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGAR-MYLVNSVGRT  114 (396)
T ss_pred             hhccCCCcccHHHHHHhcCcHHHHHHHHHh--CCCcCcccccccccHHHHHHHcCCchHHHHHHhccCc-cccccchhhh
Confidence            456788999999999999999999999997  5666555344457777899999999999999999999 5999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTR  128 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a  128 (263)
                      +-.+||.-||-++|..+-++-.
T Consensus       115 AaqmAAFVG~H~CV~iINN~~t  136 (396)
T KOG1710|consen  115 AAQMAAFVGHHECVAIINNHIT  136 (396)
T ss_pred             HHHHHHHhcchHHHHHHhcccc
Confidence            9999999999999987754444

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.50  E-value=1.4e-07  Score=57.18  Aligned_cols=27  Identities=30%  Similarity=0.517  Sum_probs=25.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827          103 ENLLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       103 ~G~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      +|+||||+|+.+|+.++|++|+++|++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~   27 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGAD   27 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCC
Confidence            599999999999999999999998876

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.44  E-value=2.8e-07  Score=86.52  Aligned_cols=94  Identities=18%  Similarity=0.204  Sum_probs=80.1

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCc
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRY-EADLPNVRDEENLL  106 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~T  106 (263)
                      -....++..++.+|+..||+..++++.-+  +..+..+ +-+.+++.|+||..|+++++++|++. +.+ ++.+|..|+|
T Consensus       500 ~~~~~~~~i~~~~aa~~GD~~alrRf~l~--g~D~~~~-DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~-~~~kDRw~rt  575 (622)
T KOG0506|consen  500 GPRENDTVINVMYAAKNGDLSALRRFALQ--GMDLETK-DYDDRTALHVAAAEGHVEVVKFLLNACKVD-PDPKDRWGRT  575 (622)
T ss_pred             CcccccchhhhhhhhhcCCHHHHHHHHHh--ccccccc-ccccchhheeecccCceeHHHHHHHHHcCC-CChhhccCCC
Confidence            35556778899999999999999999876  3455444 44558899999999999999999987 566 6999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHh
Q 037827          107 PIHRAAKQGQRNVVCYLLE  125 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~  125 (263)
                      ||--|...+|.+++++|-.
T Consensus       576 PlDdA~~F~h~~v~k~L~~  594 (622)
T KOG0506|consen  576 PLDDAKHFKHKEVVKLLEE  594 (622)
T ss_pred             cchHhHhcCcHHHHHHHHH
Confidence            9999999999999999965

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.39  E-value=3e-07  Score=91.20  Aligned_cols=100  Identities=20%  Similarity=0.167  Sum_probs=77.5

Q ss_pred             CCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHH
Q 037827           45 DDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDE-ENLLPIHRAAKQGQRNVVCYL  123 (263)
Q Consensus        45 G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~-~G~TPLh~Aa~~g~~evv~~L  123 (263)
                      |..+-++-++.+.+....+.+ +.-|+.+.|+|+..|..+++++|+.+|+++ ..+|+ .|+||||.|..+||++++..|
T Consensus        28 s~~Nqlk~F~~k~c~n~anik-D~~GR~alH~~~S~~k~~~l~wLlqhGidv-~vqD~ESG~taLHRaiyyG~idca~lL  105 (1267)
T KOG0783|consen   28 SEPNQLKGFSEKSCQNLANIK-DRYGRTALHIAVSENKNSFLRWLLQHGIDV-FVQDEESGYTALHRAIYYGNIDCASLL  105 (1267)
T ss_pred             CChhHHHHHHHHhhhhhhhHH-HhhccceeeeeeccchhHHHHHHHhcCcee-eeccccccchHhhHhhhhchHHHHHHH
Confidence            333334555554123333333 566788888999999999999999999995 99996 799999999999999999988


Q ss_pred             HhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827          124 LEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK  165 (263)
Q Consensus       124 l~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~  165 (263)
                      ++                  .+.+ ...+|++|..||.+..+
T Consensus       106 L~------------------~g~S-L~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  106 LS------------------KGRS-LRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             Hh------------------cCCc-eEEecccCCCHHHHHhh
Confidence            54                  3333 46789999999998887

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.35  E-value=4e-07  Score=85.43  Aligned_cols=82  Identities=21%  Similarity=0.127  Sum_probs=70.9

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAG  155 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~  155 (263)
                      +||..|.+..++-+.-.|.|+ +.+|.+.+|+||.||..||+++|+||++                  ..+-.++.+|..
T Consensus       512 ~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~v~v~kfl~~------------------~~kv~~~~kDRw  572 (622)
T KOG0506|consen  512 YAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGHVEVVKFLLN------------------ACKVDPDPKDRW  572 (622)
T ss_pred             hhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCceeHHHHHHH------------------HHcCCCChhhcc
Confidence            999999999999999999996 9999999999999999999999999964                  334557889999


Q ss_pred             CchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827          156 TGKILELLSKRPKAFASGIRLGYWKGLL  183 (263)
Q Consensus       156 G~TPLHlAA~~~~~f~s~~~~~~~~~li  183 (263)
                      |+|||.-|-..       .+.++++.|-
T Consensus       573 ~rtPlDdA~~F-------~h~~v~k~L~  593 (622)
T KOG0506|consen  573 GRTPLDDAKHF-------KHKEVVKLLE  593 (622)
T ss_pred             CCCcchHhHhc-------CcHHHHHHHH
Confidence            99999988765       5556666553

>PF13606 Ank_3: Ankyrin repeat

Probab=98.25  E-value=8.9e-07  Score=52.70  Aligned_cols=30  Identities=20%  Similarity=0.055  Sum_probs=27.5

Q ss_pred             CCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCC
Q 037827          155 GTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQE  191 (263)
Q Consensus       155 ~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~  191 (263)
                      +|+||||+|+++       ++.+++++||..|++||.
T Consensus         1 ~G~T~Lh~A~~~-------g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASN-------GNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHh-------CCHHHHHHHHHcCCCCCC
Confidence            699999999998       788999999999999874

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.19  E-value=1.8e-06  Score=52.23  Aligned_cols=32  Identities=16%  Similarity=0.000  Sum_probs=29.3

Q ss_pred             CCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCC
Q 037827          155 GTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEY  193 (263)
Q Consensus       155 ~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~  193 (263)
                      +|.||||+|+++       ++.++++.|+..|++++..+
T Consensus         1 dG~TpLh~A~~~-------~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQR-------GHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHT-------TCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHH-------HHHHHHHHHHHCcCCCCCCC
Confidence            699999999998       68899999999999998865

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.14  E-value=7.7e-06  Score=78.55  Aligned_cols=93  Identities=17%  Similarity=0.202  Sum_probs=79.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccc-cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACII-VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ  114 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i-~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~  114 (263)
                      ..|..|+..-|+..+..||.++....++... +.+|..+.|+||..|++.+.++|+-+|+|+ .++|..|+|+|.+|-+.
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv-~~rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDV-MARDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccc-eecccCCchhhhhHhhc
Confidence            3578899999999999999874334444443 344589999999999999999999999995 99999999999999999


Q ss_pred             CCHHHHHHHHhCCCC
Q 037827          115 GQRNVVCYLLEKTRA  129 (263)
Q Consensus       115 g~~evv~~Ll~~~a~  129 (263)
                      |.-+++..|+.+|..
T Consensus       705 ~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCP  719 (749)
T ss_pred             ccHHHHHHHHHcCCC
Confidence            999999999988874

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.14  E-value=1.1e-05  Score=76.23  Aligned_cols=93  Identities=16%  Similarity=0.225  Sum_probs=78.7

Q ss_pred             hcccChH------HHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCC
Q 037827           30 KDIANYK------QVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEE  103 (263)
Q Consensus        30 ~~~~~~t------~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~  103 (263)
                      +|.+|++      .||..++.|+++..-+||..  ++..+-.....|.+..|+||..|+.--+++|+-.||| +.+.|..
T Consensus       123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~l--GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD-~~a~d~~  199 (669)
T KOG0818|consen  123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSL--GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD-PGAQDSS  199 (669)
T ss_pred             CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHc--ccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC-CCCCCCC
Confidence            4555554      59999999999999999987  3444444445678899999999999999999999999 5999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHh
Q 037827          104 NLLPIHRAAKQGQRNVVCYLLE  125 (263)
Q Consensus       104 G~TPLh~Aa~~g~~evv~~Ll~  125 (263)
                      |+||+.+|-+.||-++.+-|++
T Consensus       200 GmtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  200 GMTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             CCcHHHHHHhcCchHHHHHHHH
Confidence            9999999999999888877754

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.08  E-value=1.6e-05  Score=76.34  Aligned_cols=118  Identities=18%  Similarity=0.132  Sum_probs=88.4

Q ss_pred             HHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC-CCCCCCCCCCCcHHHHHHHcC
Q 037827           37 QVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEA-DLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        37 ~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga-~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      .+..|+..+|+-.++..-.. .++.+ .. +.+.....++||..|+.|||++|+++|+ .+++..|..|.|+||-|+..+
T Consensus       869 eil~av~~~D~~klqE~h~~-gg~ll-~~-~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~  945 (1004)
T KOG0782|consen  869 EILRAVLSSDLMKLQETHLN-GGSLL-IQ-GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQR  945 (1004)
T ss_pred             HHHHHHHhccHHHHHHHHhc-CCceE-ee-CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhc
Confidence            37889999998777766655 23322 11 2333667789999999999999999997 455788999999999999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827          116 QRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL  183 (263)
Q Consensus       116 ~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li  183 (263)
                      +..++.+|+..|+                  + ....|..|.||-..|-+-       +..++.-+|-
T Consensus       946 ~r~vc~~lvdaga------------------s-l~ktd~kg~tp~eraqqa-------~d~dlaayle  987 (1004)
T KOG0782|consen  946 NRAVCQLLVDAGA------------------S-LRKTDSKGKTPQERAQQA-------GDPDLAAYLE  987 (1004)
T ss_pred             chHHHHHHHhcch------------------h-heecccCCCChHHHHHhc-------CCchHHHHHh
Confidence            9999999965443                  2 345688999999988765       3335555543

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.07  E-value=7.7e-06  Score=78.48  Aligned_cols=96  Identities=15%  Similarity=0.144  Sum_probs=84.8

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      .+.+.+.++-||+|+..|+-++|+++|++ .|..+-...+..|++..+-||..++-.++++|++.|+.+ ..+|..|.||
T Consensus       893 l~~~~~~~sllh~a~~tg~~eivkyildh-~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl-~ktd~kg~tp  970 (1004)
T KOG0782|consen  893 LIQGPDHCSLLHYAAKTGNGEIVKYILDH-GPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASL-RKTDSKGKTP  970 (1004)
T ss_pred             EeeCcchhhHHHHHHhcCChHHHHHHHhc-CCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhh-eecccCCCCh
Confidence            46677889999999999999999999999 565443344666788888999999999999999999996 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHh
Q 037827          108 IHRAAKQGQRNVVCYLLE  125 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~  125 (263)
                      --.|-+.|..+...||-+
T Consensus       971 ~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  971 QERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             HHHHHhcCCchHHHHHhh
Confidence            999999999999999965

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.06  E-value=6.5e-06  Score=75.70  Aligned_cols=53  Identities=23%  Similarity=0.303  Sum_probs=50.2

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      .||+.|..+.|+.|++.|.++ |++|.....||.+|+..||.++|++|+++|+-
T Consensus        42 eacR~GD~d~v~~LVetgvnV-N~vD~fD~spL~lAsLcGHe~vvklLLenGAi   94 (516)
T KOG0511|consen   42 EACRAGDVDRVRYLVETGVNV-NAVDRFDSSPLYLASLCGHEDVVKLLLENGAI   94 (516)
T ss_pred             HHhhcccHHHHHHHHHhCCCc-chhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence            899999999999999999995 99999999999999999999999999999984

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.03  E-value=1.6e-05  Score=75.24  Aligned_cols=73  Identities=23%  Similarity=0.129  Sum_probs=62.6

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRD-EENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIA  154 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~  154 (263)
                      -.++.|++++.--|+..||+. |.-+ ..|.||||.||..|+.--+++|+-                   +++++.+.|.
T Consensus       139 asvRt~nlet~LRll~lGA~~-N~~hpekg~TpLHvAAk~Gq~~Q~ElL~v-------------------YGAD~~a~d~  198 (669)
T KOG0818|consen  139 SSVRTGNLETCLRLLSLGAQA-NFFHPEKGNTPLHVAAKAGQILQAELLAV-------------------YGADPGAQDS  198 (669)
T ss_pred             HHhhcccHHHHHHHHHccccc-CCCCcccCCchhHHHHhccchhhhhHHhh-------------------ccCCCCCCCC
Confidence            568999999999999999995 8776 479999999999999988888852                   4667889999


Q ss_pred             CCchHHHHHhcCCC
Q 037827          155 GTGKILELLSKRPK  168 (263)
Q Consensus       155 ~G~TPLHlAA~~~~  168 (263)
                      +|+||+.+|-+.++
T Consensus       199 ~GmtP~~~AR~~gH  212 (669)
T KOG0818|consen  199 SGMTPVDYARQGGH  212 (669)
T ss_pred             CCCcHHHHHHhcCc
Confidence            99999998877643

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.99  E-value=1.7e-05  Score=75.53  Aligned_cols=91  Identities=16%  Similarity=0.269  Sum_probs=75.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      -|+|+++...+.+.....+.. ..+..-...+..|+...++|+..|+.+.++.|+.+|+++ ..+|++||+|||-|+..|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~-~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g   99 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLA-KVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTG   99 (560)
T ss_pred             cccchhhhccchhhHHHHHhh-hhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcC
Confidence            469999999999888777665 323332333556688899999999999999999999995 999999999999999999


Q ss_pred             CHHHHHHHHhCCC
Q 037827          116 QRNVVCYLLEKTR  128 (263)
Q Consensus       116 ~~evv~~Ll~~~a  128 (263)
                      +.+++..++.+-.
T Consensus       100 ~~q~i~~vlr~~~  112 (560)
T KOG0522|consen  100 NEQIITEVLRHLK  112 (560)
T ss_pred             CHHHHHHHHHHhH
Confidence            9998888776554

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=97.80  E-value=5.5e-05  Score=72.86  Aligned_cols=89  Identities=15%  Similarity=0.007  Sum_probs=69.9

Q ss_pred             HHHhCCcHHHHHHHHHcCCCC-C--CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccc
Q 037827           76 IVASTGKLELISTLIRYEADL-P--NVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAE  152 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l-~--~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~  152 (263)
                      -|.....+..+-+|+.+|... +  ...+.+|+||||+||..|++.+.++||.                   ++.++.++
T Consensus       630 ~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiW-------------------yg~dv~~r  690 (749)
T KOG0705|consen  630 RAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIW-------------------YGVDVMAR  690 (749)
T ss_pred             HHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHH-------------------hCccceec
Confidence            466667788889999998631 1  2345688999999999999999999864                   45567889


Q ss_pred             cCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCC
Q 037827          153 IAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQ  190 (263)
Q Consensus       153 D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~  190 (263)
                      |.+|.|+|.+|-+.       +.-+.+..|+.+|..-+
T Consensus       691 da~g~t~l~yar~a-------~sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  691 DAHGRTALFYARQA-------GSQECIDVLLQYGCPDE  721 (749)
T ss_pred             ccCCchhhhhHhhc-------ccHHHHHHHHHcCCCcc
Confidence            99999999999776       45588889998886543

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.67  E-value=5.5e-05  Score=77.11  Aligned_cols=97  Identities=14%  Similarity=0.052  Sum_probs=72.1

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      ....+++-+|.++..|..-.++.+++- . +......+.++.=|.+++|..|..-.+....-.|..+ +++|..||||||
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~-~-~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai-~i~D~~G~tpL~  646 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEW-A-GSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAI-DIRDRNGWTPLH  646 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcc-c-ccCchhhcccCCChhhHhhhcCCceeEEEEeeccccc-ccccCCCCcccc
Confidence            445688999999999999999999873 1 1122222445545566755555555555445567774 999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCC
Q 037827          110 RAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      +|+.+||..++..|+.-+++
T Consensus       647 wAa~~G~e~l~a~l~~lga~  666 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGAD  666 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccc
Confidence            99999999999999987776

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.67  E-value=0.00011  Score=70.07  Aligned_cols=74  Identities=15%  Similarity=0.055  Sum_probs=55.7

Q ss_pred             HHHHhCCcHHHHHH-HHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc
Q 037827           75 FIVASTGKLELIST-LIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI  153 (263)
Q Consensus        75 ~~AA~~G~~eiv~~-Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D  153 (263)
                      ++++.....+-... |...-+..++.+|..|+||||+|+.-||.+.++.|+..                   ++.+..+|
T Consensus        25 h~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a-------------------~Adv~~kN   85 (560)
T KOG0522|consen   25 HWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA-------------------GADVSIKN   85 (560)
T ss_pred             chhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhc-------------------CCCccccc
Confidence            36666666654444 33332333589999999999999999999999999643                   23467789


Q ss_pred             CCCchHHHHHhcCC
Q 037827          154 AGTGKILELLSKRP  167 (263)
Q Consensus       154 ~~G~TPLHlAA~~~  167 (263)
                      ++|++|||-|+..+
T Consensus        86 ~~gWs~L~EAv~~g   99 (560)
T KOG0522|consen   86 NEGWSPLHEAVSTG   99 (560)
T ss_pred             cccccHHHHHHHcC
Confidence            99999999999874

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=97.57  E-value=6.5e-05  Score=75.09  Aligned_cols=83  Identities=16%  Similarity=0.090  Sum_probs=74.9

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      +++|..|+++||.|+..|..+.+++||.+  +..+......+|....|-|...|++|++-.|+++|+.+ .++|++|..|
T Consensus        46 nikD~~GR~alH~~~S~~k~~~l~wLlqh--Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL-~i~Dkeglsp  122 (1267)
T KOG0783|consen   46 NIKDRYGRTALHIAVSENKNSFLRWLLQH--GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL-RIKDKEGLSP  122 (1267)
T ss_pred             hHHHhhccceeeeeeccchhHHHHHHHhc--CceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce-EEecccCCCH
Confidence            57899999999999999999999999998  55666665666788889999999999999999999996 9999999999


Q ss_pred             HHHHHH
Q 037827          108 IHRAAK  113 (263)
Q Consensus       108 Lh~Aa~  113 (263)
                      |.+-++
T Consensus       123 lq~~~r  128 (1267)
T KOG0783|consen  123 LQFLSR  128 (1267)
T ss_pred             HHHHhh
Confidence            998776

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.38  E-value=0.00032  Score=59.21  Aligned_cols=55  Identities=24%  Similarity=0.272  Sum_probs=40.9

Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827           93 EADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus        93 ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      +.++ |++|..|||||++|+..|..++|.||+.+|+                  ..+-..|..|.+++.+|-+.
T Consensus         2 e~~i-n~rD~fgWTalmcaa~eg~~eavsyllgrg~------------------a~vgv~d~ssldaaqlaek~   56 (223)
T KOG2384|consen    2 EGNI-NARDAFGWTALMCAAMEGSNEAVSYLLGRGV------------------AFVGVTDESSLDAAQLAEKG   56 (223)
T ss_pred             CCCc-cchhhhcchHHHHHhhhcchhHHHHHhccCc------------------ccccccccccchHHHHHHhc
Confidence            3464 9999999999999999999999999976552                  34445555555555555443

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.15  E-value=0.0021  Score=64.63  Aligned_cols=135  Identities=13%  Similarity=-0.050  Sum_probs=97.0

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCC-cc-cccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPN-AL-ACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~-~~-~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      ..+...+..|+..||.-.|+..++. ... .+ ....+.=|....++|..+-+.|++++|++++..+        .-+|.
T Consensus        23 ~~~e~~fL~a~E~gd~~~V~k~l~~-~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL   93 (822)
T KOG3609|consen   23 NEGEKGFLLAHENGDVPLVAKALEY-KAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALL   93 (822)
T ss_pred             chhhHHHHHHHHcCChHHHHHHHHh-ccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHH
Confidence            3455567889999999999999986 222 11 1222333455556899999999999999887663        45799


Q ss_pred             HHHHcCCHHHHHHHHhCCCC-CCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          110 RAAKQGQRNVVCYLLEKTRA-PLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~-p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      +|+..|.+++|+.++.+-.. +..+.          -.+.....-.-+.|||.+||..       .+.++++.|+..|.+
T Consensus        94 ~aI~~~~v~~VE~ll~~~~~~~~~~~----------~~d~~~~~ft~ditPliLAAh~-------NnyEil~~Ll~kg~~  156 (822)
T KOG3609|consen   94 LAIAVGSVPLVELLLVHFVDAPYLER----------SGDANSPHFTPDITPLMLAAHL-------NNFEILQCLLTRGHC  156 (822)
T ss_pred             HHHHHHHHHHHHHHHhcccccchhcc----------ccccCcccCCCCccHHHHHHHh-------cchHHHHHHHHcCCC
Confidence            99999999999999876553 11111          1122233456788999999987       788999999999887


Q ss_pred             CCCC
Q 037827          189 VQEE  192 (263)
Q Consensus       189 v~~~  192 (263)
                      +...
T Consensus       157 i~~P  160 (822)
T KOG3609|consen  157 IPIP  160 (822)
T ss_pred             CCCC
Confidence            7654

>smart00248 ANK ankyrin repeats

Probab=97.04  E-value=0.0011  Score=36.35  Aligned_cols=27  Identities=37%  Similarity=0.524  Sum_probs=24.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827          103 ENLLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       103 ~G~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      .|.||||+|+..|+.+++++|+..+.+
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            478999999999999999999987654

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.98  E-value=0.0039  Score=57.79  Aligned_cols=84  Identities=11%  Similarity=0.077  Sum_probs=60.3

Q ss_pred             hHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q 037827           35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ  114 (263)
Q Consensus        35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~  114 (263)
                      .-.|+.|++.||.+.|++|++.  +..+++. +.-......+|+..||.++|++|+++||-. ..-..+|.. -|+++.+
T Consensus        37 f~elceacR~GD~d~v~~LVet--gvnVN~v-D~fD~spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~R-C~YgaLn  111 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVET--GVNVNAV-DRFDSSPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDR-CHYGALN  111 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHh--CCCcchh-hcccccHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcch-hhhhhhh
Confidence            5579999999999999999996  4555554 332245556999999999999999999974 433445554 5667765


Q ss_pred             CCHHHHHHHHh
Q 037827          115 GQRNVVCYLLE  125 (263)
Q Consensus       115 g~~evv~~Ll~  125 (263)
                      .+  +-+.|++
T Consensus       112 d~--IR~mlls  120 (516)
T KOG0511|consen  112 DR--IRRMLLS  120 (516)
T ss_pred             HH--HHHHHHH
Confidence            54  3344543

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.85  E-value=0.00089  Score=68.52  Aligned_cols=96  Identities=11%  Similarity=-0.101  Sum_probs=66.4

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827           71 SIFEFIVASTGKLELISTLIRY-EADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA  149 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~  149 (263)
                      ..+.++++..|+...++.+++- |.. ....|.+|.--+|+ |..++.+.+-+|                  +...+..+
T Consensus       575 ~lllhL~a~~lyawLie~~~e~~~~~-~~eld~d~qgV~hf-ca~lg~ewA~ll------------------~~~~~~ai  634 (975)
T KOG0520|consen  575 MLLLHLLAELLYAWLIEKVIEWAGSG-DLELDRDGQGVIHF-CAALGYEWAFLP------------------ISADGVAI  634 (975)
T ss_pred             hHHHHHHHHHhHHHHHHHHhcccccC-chhhcccCCChhhH-hhhcCCceeEEE------------------Eeeccccc
Confidence            5666677777777777777764 443 24555555555566 444555555444                  44455567


Q ss_pred             ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCC
Q 037827          150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEY  193 (263)
Q Consensus       150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~  193 (263)
                      +.+|.+|+||||+||.+       |+..++..|+..|++.....
T Consensus       635 ~i~D~~G~tpL~wAa~~-------G~e~l~a~l~~lga~~~~~t  671 (975)
T KOG0520|consen  635 DIRDRNGWTPLHWAAFR-------GREKLVASLIELGADPGAVT  671 (975)
T ss_pred             ccccCCCCcccchHhhc-------CHHHHHHHHHHhcccccccc
Confidence            88999999999999998       67789999988877666544

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=96.73  E-value=0.0013  Score=67.00  Aligned_cols=75  Identities=21%  Similarity=0.310  Sum_probs=64.9

Q ss_pred             HHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccc
Q 037827           72 IFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWA  151 (263)
Q Consensus        72 iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~  151 (263)
                      ...+.|+..|..-++++|++.|+++ +.+|..|+||||.+...|+...+..|+.+                   ++..++
T Consensus       658 s~lh~a~~~~~~~~~e~ll~~ga~v-n~~d~~g~~plh~~~~~g~~~~~~~ll~~-------------------~a~~~a  717 (785)
T KOG0521|consen  658 SLLHVAVGTGDSGAVELLLQNGADV-NALDSKGRTPLHHATASGHTSIACLLLKR-------------------GADPNA  717 (785)
T ss_pred             chhhhhhccchHHHHHHHHhcCCcc-hhhhccCCCcchhhhhhcccchhhhhccc-------------------cccccc
Confidence            3445899999999999999999994 99999999999999999999999888543                   344677


Q ss_pred             ccCCCchHHHHHhcC
Q 037827          152 EIAGTGKILELLSKR  166 (263)
Q Consensus       152 ~D~~G~TPLHlAA~~  166 (263)
                      .|.+|.+||++|...
T Consensus       718 ~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  718 FDPDGKLPLDIAMEA  732 (785)
T ss_pred             cCccCcchhhHHhhh
Confidence            789999999999665

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=96.61  E-value=0.0038  Score=62.86  Aligned_cols=92  Identities=12%  Similarity=0.104  Sum_probs=72.4

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC---------CC
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL---------PN   98 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l---------~~   98 (263)
                      ...|.-|+++|+.|+.+-+.++++.|++.  +...       |+ ....|...|..+.|+.++.+-...         ..
T Consensus        56 nc~d~lGr~al~iai~nenle~~eLLl~~--~~~~-------gd-ALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~  125 (822)
T KOG3609|consen   56 NCRDPLGRLALHIAIDNENLELQELLLDT--SSEE-------GD-ALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANS  125 (822)
T ss_pred             hccChHhhhceecccccccHHHHHHHhcC--cccc-------ch-HHHHHHHHHHHHHHHHHHhcccccchhccccccCc
Confidence            35677799999999999999999999987  2211       12 124899999999999999884321         11


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827           99 VRDEENLLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus        99 ~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      ..=..+.|||.+||..+|.||+++|+.+|+.
T Consensus       126 ~~ft~ditPliLAAh~NnyEil~~Ll~kg~~  156 (822)
T KOG3609|consen  126 PHFTPDITPLMLAAHLNNFEILQCLLTRGHC  156 (822)
T ss_pred             ccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence            2334578999999999999999999999986

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=96.58  E-value=0.0021  Score=65.48  Aligned_cols=89  Identities=16%  Similarity=0.192  Sum_probs=76.0

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      ..|+++||.|+..|..-.++.|+..  ++.++.. +..|....+.+...|+...+..|+++|++ .++.|.+|.+||++|
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~--ga~vn~~-d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~a~~~~~~~~l~~a  729 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQN--GADVNAL-DSKGRTPLHHATASGHTSIACLLLKRGAD-PNAFDPDGKLPLDIA  729 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhc--CCcchhh-hccCCCcchhhhhhcccchhhhhcccccc-ccccCccCcchhhHH
Confidence            3579999999999999999999987  4556666 44456666789999999999999999999 599999999999999


Q ss_pred             HHcCCHHHHHHHH
Q 037827          112 AKQGQRNVVCYLL  124 (263)
Q Consensus       112 a~~g~~evv~~Ll  124 (263)
                      ....+.+++-+|.
T Consensus       730 ~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  730 MEAANADIVLLLR  742 (785)
T ss_pred             hhhccccHHHHHh
Confidence            8888888876654

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.59  E-value=0.022  Score=54.60  Aligned_cols=65  Identities=23%  Similarity=0.169  Sum_probs=51.2

Q ss_pred             HHHHHHHHHcCCCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCc
Q 037827           83 LELISTLIRYEADL-----PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTG  157 (263)
Q Consensus        83 ~eiv~~Ll~~ga~l-----~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~  157 (263)
                      .+.+++|.+++.+.     +...+..-.||||+|+..|..++|.+|++                  .+ .++..+|..|.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Le------------------eg-~Dp~~kd~~Gr  464 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLE------------------EG-CDPSTKDGAGR  464 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHH------------------hc-CCchhcccCCC
Confidence            67889999998764     23344456799999999999999999964                  33 45678899999


Q ss_pred             hHHHHHhcC
Q 037827          158 KILELLSKR  166 (263)
Q Consensus       158 TPLHlAA~~  166 (263)
                      ||..+++..
T Consensus       465 tpy~ls~nk  473 (591)
T KOG2505|consen  465 TPYSLSANK  473 (591)
T ss_pred             CcccccccH
Confidence            999988743

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=95.44  E-value=0.045  Score=46.48  Aligned_cols=66  Identities=8%  Similarity=0.070  Sum_probs=36.1

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCC
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEAD   95 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~   95 (263)
                      +..|..|||++..|+..|..+.+.+|+.. ....+... +..+.-...+|-..|..++|+.|.+.-.+
T Consensus         6 n~rD~fgWTalmcaa~eg~~eavsyllgr-g~a~vgv~-d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    6 NARDAFGWTALMCAAMEGSNEAVSYLLGR-GVAFVGVT-DESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             cchhhhcchHHHHHhhhcchhHHHHHhcc-Cccccccc-ccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            34566667777777777777766666665 21222222 22332233356666666666666665444

>smart00248 ANK ankyrin repeats

Probab=94.48  E-value=0.05  Score=29.25  Aligned_cols=29  Identities=21%  Similarity=0.053  Sum_probs=24.1

Q ss_pred             CCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCC
Q 037827          155 GTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQ  190 (263)
Q Consensus       155 ~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~  190 (263)
                      +|.||||+|+..       ++.++++.|+..+.+++
T Consensus         1 ~~~~~l~~~~~~-------~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAEN-------GNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHc-------CCHHHHHHHHHcCCCCC
Confidence            488999999987       67799999998876553

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=90.77  E-value=0.57  Score=45.20  Aligned_cols=50  Identities=20%  Similarity=0.348  Sum_probs=42.6

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLL  124 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll  124 (263)
                      .+..|+||..|..++|.+|++.|+| +..+|..|+||..+++   +.+|-..++
T Consensus       431 sT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~---nkdVk~~F~  480 (591)
T KOG2505|consen  431 STFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSA---NKDVKSIFI  480 (591)
T ss_pred             chHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCcccccc---cHHHHHHHH
Confidence            5667799999999999999999999 6999999999999988   445544443

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=88.26  E-value=3  Score=36.69  Aligned_cols=93  Identities=8%  Similarity=-0.001  Sum_probs=64.9

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccc----cccCCcCHHHH-HHHhCCcHHHHHHHHHcCCCCCCC---CCCCC
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALAC----IIVDQSSIFEF-IVASTGKLELISTLIRYEADLPNV---RDEEN  104 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~----~i~~~g~iv~~-~AA~~G~~eiv~~Ll~~ga~l~~~---~d~~G  104 (263)
                      +.++++..|+.++..+++..|+++   -....    .+..+-.-++. +..-..+..+.++++++|---+|.   +-+.|
T Consensus       178 dA~~Am~~si~~~K~dva~~lls~---f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSG  254 (284)
T PF06128_consen  178 DAHQAMWLSIGNAKEDVALYLLSK---FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSG  254 (284)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHhh---cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCc
Confidence            457788888888888888888875   11100    01111011111 455666788999999998522453   46789


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCC
Q 037827          105 LLPIHRAAKQGQRNVVCYLLEKTR  128 (263)
Q Consensus       105 ~TPLh~Aa~~g~~evv~~Ll~~~a  128 (263)
                      .|-|--|..++..+|+.+|+.+|+
T Consensus       255 dtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  255 DTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             chHHHhHHhcCcHHHHHHHHHcCc
Confidence            999999999999999999999987

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=82.06  E-value=2.2  Score=30.43  Aligned_cols=41  Identities=15%  Similarity=0.219  Sum_probs=19.6

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLL  124 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll  124 (263)
                      .|...|+.||++.+++.+ .. +      ...+..|+..-+-+++++|+
T Consensus        12 ~Ai~GGN~eII~~c~~~~-~~-~------~~~l~~AI~~H~n~i~~~l~   52 (76)
T PF11929_consen   12 YAIIGGNFEIINICLKKN-KP-D------NDCLEYAIKSHNNEIADWLI   52 (76)
T ss_pred             HHHhCCCHHHHHHHHHHh-cc-H------HHHHHHHHHHhhHHHHHHHH
Confidence            455555555555554433 11 1      23355555555555555554

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	263
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		1e-04
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		4e-04
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		4e-04
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		5e-04

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 77  VASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT 127
            A  G+L+ + TL+ ++AD+ N+ D E  LP+H AAK+G   VV +L++ T
Sbjct: 77  AARAGQLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 77  VASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT 127
            A  G L+ + TL+ ++AD+ N+ D E  LP+H AAK+G   VV +L++ T
Sbjct: 77  AARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 77  VASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT 127
            A  G L+ + TL+ ++AD+ N+ D E  LP+H AAK+G   VV +L++ T
Sbjct: 77  AARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 77  VASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKT 127
            A  G L+ + TL+ ++AD+ N+ D E  LP+H AAK+G   VV +L++ T
Sbjct: 77  AARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	263
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-06
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-04
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-05
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-04

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 44.8 bits (107), Expect = 4e-06
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 11/71 (15%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK----------T 127
           A  G L+ +  L R  A   +VRD    LP+  A + G R+V  YL              
Sbjct: 86  AREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHAR 144

Query: 128 RAPLDGSDDVA 138
               +G  D+ 
Sbjct: 145 IDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 40.5 bits (96), Expect = 1e-04
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 76  IVASTGKLELISTLIRYEADLPNVRDEENL-LPIHRAAKQGQRNVVCYLLEK 126
            V   G   +   L+ + A+ PN  D   L  P+H AA++G  + +  L   
Sbjct: 50  QVMMMGSARVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 40.5 bits (96), Expect = 9e-05
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           A  G L+ +  L R  A   +V D    LP+  A +QG R++  YL   
Sbjct: 86  AREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 76  IVASTGKLELISTLIRYEADLPNVRDEENL-LPIHRAAKQGQRNVVCYLLEK 126
            V   G  ++   L+ + A+ PN  D   L  P+H AA++G  + +  L   
Sbjct: 50  QVMMMGSAQVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 40.9 bits (97), Expect = 1e-04
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           A+ G+L+ +   +R   +L N  DE    P+  A+  G+   V +LLE 
Sbjct: 10  AAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW 58

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.9 bits (97), Expect = 3e-04
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           +  G L ++  L++  A  PNV + +   P+H AA+ G   V  YLL+ 
Sbjct: 22  SFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQN 69

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           A  G   ++  L+   A+ PN+       P+H AA++G    V  LLEK
Sbjct: 88  ARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEK 135

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 16/103 (15%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLE------------ 125
            S G  E+   L+++ A + N  D     P+H AA + +  V   LL             
Sbjct: 99  CSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHG 157

Query: 126 KT---RAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK 165
           K+    AP     +      + H  L  A  A   K+ + L+ 
Sbjct: 158 KSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLAL 200

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 38.1 bits (90), Expect = 9e-04
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           A+ G++  ++T I  E  + N  DEE   P+  AA  GQ  VV +LL+ 
Sbjct: 11  AAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQN 58

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	263
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.95
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.95
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.95
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.95
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.95
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.94
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.94
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.94
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.94
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.94
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.94
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.93
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.93
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.93
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.93
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.92
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.92
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.92
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.92
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.92
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.92
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.92
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.91
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.91
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.91
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.91
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.91
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.9
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.9
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.9
2rfa_A	232	Transient receptor potential cation channel subfa	99.9
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.9
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.9
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.9
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.9
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.9
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.89
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.89
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.89
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.88
2etb_A	256	Transient receptor potential cation channel subfam	99.88
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.88
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.88
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.88
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.88
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.88
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.88
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.88
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.88
2rfa_A	232	Transient receptor potential cation channel subfa	99.87
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.87
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.87
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.87
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.87
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.87
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.87
2pnn_A	273	Transient receptor potential cation channel subfa	99.86
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.86
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.86
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.86
2etb_A	256	Transient receptor potential cation channel subfam	99.86
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.86
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.86
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.85
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.85
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.85
2pnn_A	273	Transient receptor potential cation channel subfa	99.85
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.84
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.84
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.84
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.83
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.83
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.83
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.83
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.83
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.82
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.82
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.81
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.81
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.8
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.8
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.79
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.78
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.78
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.78
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.77
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.77
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.77
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.76
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.76
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.75
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.75
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.75
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.75
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.74
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.74
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.73
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.73
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.73
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.72
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.72
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.72
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.72
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.71
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.69
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.68
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.68
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.67
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.66
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.65
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.63
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.62
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.61
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.6

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.95  E-value=1.3e-27  Score=211.78  Aligned_cols=195  Identities=16%  Similarity=0.126  Sum_probs=162.8

Q ss_pred             hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827           27 KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL  106 (263)
Q Consensus        27 ~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T  106 (263)
                      ....+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|
T Consensus        52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t  127 (285)
T 3d9h_A           52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQ--GWAVNII-TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHT  127 (285)
T ss_dssp             TCSSSCCSCCHHHHHHHTTCHHHHHHHHHT--TCCSCEE-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCC
T ss_pred             ccCCCccCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCC
Confidence            356788999999999999999999999997  3445444 566788889999999999999999999995 999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCC--------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTRAP--------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a~p--------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      |||+|+..|+.++|++|++.++++              ..++.+++..|++.+ ..++.+|.+|.||||+|+.+      
T Consensus       128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~------  200 (285)
T 3d9h_A          128 PLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACEN------  200 (285)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHT------
T ss_pred             HHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHc------
Confidence            999999999999999999999862              457888999999875 45788999999999999997      


Q ss_pred             CcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceecc
Q 037827          173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATN  247 (263)
Q Consensus       173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  247 (263)
                       ++.++++.|+..|++++. +..+.++.+.             +......++..+|+..|+|+    +.|+|||++|..
T Consensus       201 -~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~-------------A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~  264 (285)
T 3d9h_A          201 -QQRACVKKLLESGADVNQ-GKGQDSPLHA-------------VVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP  264 (285)
T ss_dssp             -TCHHHHHHHHHTTCCTTC-CBTTBCHHHH-------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred             -CcHHHHHHHHHCCCCCCC-CCCCCCHHHH-------------HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence             778999999999998874 2222333222             22222367788899999998    889999999983

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.95  E-value=8.7e-28  Score=209.00  Aligned_cols=196  Identities=12%  Similarity=-0.004  Sum_probs=147.0

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhcc-CCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSK-TPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~-~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ..|.+|+||||.|+..|+.++|+.|++.+ ++..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||
T Consensus         4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tp   81 (282)
T 1oy3_D            4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTA   81 (282)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCH
T ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence            46789999999999999999999999862 22224443 556788889999999999999999999995 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCC---------------------------------------------------------C
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRA---------------------------------------------------------P  130 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~---------------------------------------------------------p  130 (263)
                      ||+|+..|+.+++++|++++++                                                         |
T Consensus        82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~  161 (282)
T 1oy3_D           82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP  161 (282)
T ss_dssp             HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred             HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence            9999999999999999987642                                                         0


Q ss_pred             -----CCCCHHHHHHHHHhCCCcccccc-CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCC
Q 037827          131 -----LDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENV  204 (263)
Q Consensus       131 -----~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~  204 (263)
                           ..++.+++..|++.+.. ++.++ ..|.||||+|+++       ++.++++.|+..|++++..+..+.++.+.++
T Consensus       162 L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~-------~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~  233 (282)
T 1oy3_D          162 LHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEA-------QAASVLELLLKAGADPTARMYGGRTPLGSAL  233 (282)
T ss_dssp             HHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHc-------CCHHHHHHHHHcCCCCcccccCCCCHHHHHH
Confidence                 45677888888887544 45565 4599999999887       6779999999999888887655544443333


Q ss_pred             ChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceecc
Q 037827          205 DGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATN  247 (263)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  247 (263)
                      ..             ...++..+|+..||++    +.+.|||+.|.+
T Consensus       234 ~~-------------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~  267 (282)
T 1oy3_D          234 LR-------------PNPILARLLRAHGAPEPEDGGDKLSPCSSSGS  267 (282)
T ss_dssp             TS-------------SCHHHHHHHHHTTCCCCCCC------------
T ss_pred             Hc-------------CCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence            22             2267788899999999    889999999964

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.95  E-value=3.6e-28  Score=214.67  Aligned_cols=198  Identities=17%  Similarity=0.073  Sum_probs=138.2

Q ss_pred             hhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccc------cccCCcCHHHHHHHhCCcH-HHHHHHHHcCCCCCC
Q 037827           26 EKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALAC------IIVDQSSIFEFIVASTGKL-ELISTLIRYEADLPN   98 (263)
Q Consensus        26 ~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~------~i~~~g~iv~~~AA~~G~~-eiv~~Ll~~ga~l~~   98 (263)
                      +...+|..+.+||+.||..|++++|+.||+. .......      ..+..+....++|+..++. .++++|++.|+++ +
T Consensus         3 ee~kkd~~~~~~L~~A~~~G~~~~v~~LL~~-~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n   80 (269)
T 4b93_B            3 EETKKDYREVEKLLRAVADGDLEMVRYLLEW-TEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-N   80 (269)
T ss_dssp             ----CCCHHHHHHHHHHHTTCHHHHHHHHTC-C----------------------------------------CCCCT-T
T ss_pred             cccccCccchhHHHHHHHcCCHHHHHHHHHC-CCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-C
Confidence            3446778889999999999999999999987 2221111      0122223444578877766 4889999999995 9


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHH
Q 037827           99 VRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELL  163 (263)
Q Consensus        99 ~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlA  163 (263)
                      .+|.+|+||||+||..|+.++|++|+..++++               ..+..+++..|+..+ ..++.+|.+|.||||+|
T Consensus        81 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A  159 (269)
T 4b93_B           81 VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYA  159 (269)
T ss_dssp             CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHH
T ss_pred             CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999872               456788888888874 55788999999999999


Q ss_pred             hcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccC
Q 037827          164 SKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVST  239 (263)
Q Consensus       164 A~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  239 (263)
                      ++.       ++.++++.|+..|++++..+..+.++.+.++..             ...++..+|+..|||+    +.|+
T Consensus       160 ~~~-------g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~-------------g~~~~v~~Ll~~Gad~~~~d~~G~  219 (269)
T 4b93_B          160 CSG-------GHHELVALLLQHGASINASNNKGNTALHEAVIE-------------KHVFVVELLLLHGASVQVLNKRQR  219 (269)
T ss_dssp             HHT-------TCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHT-------------TCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred             HHC-------CCHHHHHHHHHCCCCCCccccCCCcHHHHHHHc-------------CCHHHHHHHHHCCCCCCCcCCCCC
Confidence            997       678999999999999998876555554433322             2266778899999999    8899


Q ss_pred             Cccceec
Q 037827          240 TPLTLAT  246 (263)
Q Consensus       240 ~~~~~~~  246 (263)
                      |||++|.
T Consensus       220 TpL~~A~  226 (269)
T 4b93_B          220 TAVDCAE  226 (269)
T ss_dssp             CSGGGSC
T ss_pred             CHHHHHH
Confidence            9999996

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.95  E-value=4.3e-27  Score=199.09  Aligned_cols=201  Identities=14%  Similarity=0.056  Sum_probs=161.8

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC--CCCCCC-CCCCCCcHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE--ADLPNV-RDEENLLPIHR  110 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g--a~l~~~-~d~~G~TPLh~  110 (263)
                      |.||||.|+..|+.+.++.|++. .+...... +..|....++|+..|+.+++++|+++|  +++ +. .|..|+||||+
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~g~t~L~~   78 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHS-KPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENVNL-DDYPDDSGWTPFHI   78 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHH-CGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCG-GGCCCTTSCCHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhc-CccccccC-CCCCCCHHHHHHHcCCHHHHHHHHhccccccc-cccCCCCCCCHHHH
Confidence            67899999999999999999998 44444333 566788889999999999999999999  564 44 88999999999


Q ss_pred             HHHcCCHHHHHHHHhCC--CCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          111 AAKQGQRNVVCYLLEKT--RAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~--a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+..|+.+++++|++++  ++.               ..+..+++..|++. +..++.+|.+|.||||+|++.       
T Consensus        79 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~-------  150 (228)
T 2dzn_A           79 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASV-------  150 (228)
T ss_dssp             HHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHT-------
T ss_pred             HHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHc-------
Confidence            99999999999999998  431               56788999999987 455788999999999999997       


Q ss_pred             cchHHHHHHcccC-CCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHH-hhhccc----cccCCccceecc
Q 037827          174 IRLGYWKGLLYQW-IPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLL-HWFVSF----RVSTTPLTLATN  247 (263)
Q Consensus       174 ~~~~~~~~li~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~  247 (263)
                      ++.++++.|+..| ++++..+..+.++.+.++...             ..++..+|+ ..|+|+    +.|+|||++|..
T Consensus       151 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~-------------~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~  217 (228)
T 2dzn_A          151 GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG-------------HGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN  217 (228)
T ss_dssp             TCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT-------------CHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred             CCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcC-------------CHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence            6789999999999 888877655544443333222             256777888 789998    789999999964


Q ss_pred             ccccCchhhhhhhhcC
Q 037827          248 DVRLPHSKIQYLHQYL  263 (263)
Q Consensus       248 ~~~~~~~~~~~~~~~~  263 (263)
                      .     ...+||.+++
T Consensus       218 ~-----~~~~~l~~~i  228 (228)
T 2dzn_A          218 E-----QVKKFFLNNV  228 (228)
T ss_dssp             T-----THHHHHHTTC
T ss_pred             H-----HHHHHHHhcC
Confidence            2     4566776653

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.94  E-value=5.5e-27  Score=199.73  Aligned_cols=194  Identities=13%  Similarity=0.009  Sum_probs=158.7

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHh---ccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIM---SKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~---~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      ..|.+|+||||.|+..|+.++++.|++   . .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+
T Consensus         4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~   80 (241)
T 1k1a_A            4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQ   80 (241)
T ss_dssp             ---CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCC
Confidence            568899999999999999999999997   2 23444444 556788889999999999999999999995 99999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCC----CC---------------CCCCHHHHHHHHHhCCCcccccc-CCCchHHHHHhc
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTR----AP---------------LDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELLSK  165 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a----~p---------------~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlAA~  165 (263)
                      ||||+|+..|+.+++++|++.++    +.               ..+..+++..|++.+.. ++..| ..|.||||+|++
T Consensus        81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~  159 (241)
T 1k1a_A           81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVE  159 (241)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHH
Confidence            99999999999999999999886    21               45778899999988554 56666 899999999999


Q ss_pred             CCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCc
Q 037827          166 RPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTP  241 (263)
Q Consensus       166 ~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  241 (263)
                      +       ++.++++.|+..|++++..+..+.++.+.++.             ....++..+|+..|+|+    +.++||
T Consensus       160 ~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~ga~~~~~~~~g~tp  219 (241)
T 1k1a_A          160 N-------NSLSMVQLLLQHGANVNAQMYSGSSALHSASG-------------RGLLPLVRTLVRSGADSSLKNCHNDTP  219 (241)
T ss_dssp             T-------TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH-------------HTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred             c-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-------------cCCHHHHHHHHhcCCCCCCcCCCCCCH
Confidence            7       67899999999999998876555444433322             22267788899999998    789999


Q ss_pred             cceec
Q 037827          242 LTLAT  246 (263)
Q Consensus       242 ~~~~~  246 (263)
                      |++|.
T Consensus       220 l~~A~  224 (241)
T 1k1a_A          220 LMVAR  224 (241)
T ss_dssp             TTTCS
T ss_pred             HHHHH
Confidence            99996

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.94  E-value=6.6e-27  Score=199.36  Aligned_cols=193  Identities=16%  Similarity=0.055  Sum_probs=162.2

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      .++.+|+||||.|+..|+.+++++|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus         6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L   81 (237)
T 3b7b_A            6 MEHQNKRSPLHAAAEAGHVDICHMLVQA--GANIDTC-SEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCL   81 (237)
T ss_dssp             CSSCCSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHH
T ss_pred             cccCCCCCHHHHHHHcCcHHHHHHHHHc--CCCcCcc-CCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHH
Confidence            5678899999999999999999999997  3444443 556678889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCC-CC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          109 HRAAKQGQRNVVCYLLEKTR-AP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a-~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      |+|+..|+.+++++|++.+. ++               ..+..+++..|++.+ ..++.+|.+|.||||+|++.      
T Consensus        82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~------  154 (237)
T 3b7b_A           82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWAAFS------  154 (237)
T ss_dssp             HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH------
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHC------
Confidence            99999999999999999984 31               568889999999875 44688899999999999987      


Q ss_pred             CcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                       ++.++++.|+..|++++..+..+.++.+.++..             ...++..+|+..|+|+    +.|.|||++|.
T Consensus       155 -~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-------------~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~  218 (237)
T 3b7b_A          155 -GCVDIAEILLAAKCDLHAVNIHGDSPLHIAARE-------------NRYDCVVLFLSRDSDVTLKNKEGETPLQCAS  218 (237)
T ss_dssp             -CCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT-------------TCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred             -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHh-------------CCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence             678999999999999888765444444333222             2267788899999999    79999999996

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.94  E-value=9.9e-28  Score=208.04  Aligned_cols=195  Identities=14%  Similarity=0.082  Sum_probs=133.9

Q ss_pred             hhhcccChHHHHHHHHcC-------------CHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC
Q 037827           28 IIKDIANYKQVTRYLLED-------------DWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEA   94 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G-------------~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga   94 (263)
                      ..+|.+|+||||.|+..|             +.++++.|++. . ..+....+..|....++||..|+.+++++|+++|+
T Consensus         4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~-g-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~   81 (253)
T 1yyh_A            4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ-G-ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA   81 (253)
T ss_dssp             --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc-c-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            457889999999999987             89999999987 3 33333335677888899999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CC---------------CCCCHHHHHHHHHhCCCccccccCCCch
Q 037827           95 DLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTR-AP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGK  158 (263)
Q Consensus        95 ~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a-~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~T  158 (263)
                      ++ +.+|..|+||||+|+..|+.+++++|++.++ +.               ..+..+++..|+..+ ..++.+|.+|.|
T Consensus        82 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t  159 (253)
T 1yyh_A           82 DA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKS  159 (253)
T ss_dssp             CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTSCB
T ss_pred             CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCCCC
Confidence            95 9999999999999999999999999999987 31               446677888888864 557889999999


Q ss_pred             HHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc---
Q 037827          159 ILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF---  235 (263)
Q Consensus       159 PLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  235 (263)
                      |||+|++.       ++.++++.|+..|++++..+..+.++.+.++..             ...++..+|+..|+++   
T Consensus       160 ~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~-------------~~~~~v~~Ll~~ga~~~~~  219 (253)
T 1yyh_A          160 ALHWAAAV-------NNVDAAVVLLKNGANKDMQNNREETPLFLAARE-------------GSYETAKVLLDHFANRDIT  219 (253)
T ss_dssp             HHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-------------TCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHHHc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC-------------CCHHHHHHHHHcCCCcccc
Confidence            99999997       678999999999999988765554444333322             2367788899999998   


Q ss_pred             -cccCCccceec
Q 037827          236 -RVSTTPLTLAT  246 (263)
Q Consensus       236 -~~~~~~~~~~~  246 (263)
                       +.++|||++|.
T Consensus       220 d~~g~tpl~~A~  231 (253)
T 1yyh_A          220 DHMDRLPRDIAQ  231 (253)
T ss_dssp             CTTCCCHHHHHH
T ss_pred             ccCCCCHHHHHH
Confidence             78999999995

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.94  E-value=3.9e-27  Score=207.46  Aligned_cols=195  Identities=12%  Similarity=0.081  Sum_probs=155.3

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..+.+|||.|+..|+.++|+.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        35 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL  110 (299)
T 1s70_B           35 KVKFDDGAVFLAACSSGDTEEVLRLLER--GADINYA-NVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPL  110 (299)
T ss_dssp             CCEECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             ccccCCccHHHHHHHcCCHHHHHHHHHc--CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHH
Confidence            4456789999999999999999999997  3445444 556788889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCC--------------------------
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPK--------------------------  147 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~--------------------------  147 (263)
                      |+|+..|+.++|++|+++|+++               ..++.+++..++...+.                          
T Consensus       111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  190 (299)
T 1s70_B          111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI  190 (299)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence            9999999999999999999863               23344455444443222                          


Q ss_pred             ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHH
Q 037827          148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYL  227 (263)
Q Consensus       148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                      .....+..|.||||+|+.+       ++.++++.|+..|++++..+..+.++.+.++.-             ...++..+
T Consensus       191 ~~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~-------------~~~~~v~~  250 (299)
T 1s70_B          191 NDVRHAKSGGTALHVAAAK-------GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHW-------------GKEEACRI  250 (299)
T ss_dssp             CCCCCTTTCCCHHHHHHHH-------TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT-------------TCHHHHHH
T ss_pred             chhhhcCCCCCHHHHHHHC-------CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhc-------------CCHHHHHH
Confidence            2233578899999999997       678999999999999988765554444333222             22667788


Q ss_pred             HHhhhccc----cccCCccceecc
Q 037827          228 LLHWFVSF----RVSTTPLTLATN  247 (263)
Q Consensus       228 ~~~~~~~~----~~~~~~~~~~~~  247 (263)
                      |+..|+|+    +.|+|||++|..
T Consensus       251 Ll~~gad~~~~d~~g~t~l~~A~~  274 (299)
T 1s70_B          251 LVENLCDMEAVNKVGQTAFDVADE  274 (299)
T ss_dssp             HHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHH
Confidence            99999998    789999999963

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.94  E-value=8.6e-27  Score=197.89  Aligned_cols=191  Identities=18%  Similarity=0.137  Sum_probs=160.2

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      ..+.+|||.|+..|+++.++.++.. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus         4 ~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A   80 (231)
T 3aji_A            4 CVSNIMICNLAYSGKLDELKERILA-DKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIA   80 (231)
T ss_dssp             CCSSSHHHHHHHHTCHHHHHHHHHH-CGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHH
T ss_pred             ccccchHHHHHHhCCHHHHHHHHHh-chhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHH
Confidence            3467899999999999999999998 56555443 566788888999999999999999999995 99999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcch
Q 037827          112 AKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRL  176 (263)
Q Consensus       112 a~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~  176 (263)
                      +..|+.+++++|+++++++               ..+..+++..|++.+ ..++.+|..|.||||+|++.       ++.
T Consensus        81 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-------~~~  152 (231)
T 3aji_A           81 ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAK-------GNL  152 (231)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH-------TCH
T ss_pred             HHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHc-------CCH
Confidence            9999999999999999862               567889999998874 44688899999999999987       678


Q ss_pred             HHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          177 GYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       177 ~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ++++.|+..|++++..+..+.++.+.++.             ....++..+|+..|+|+    +.++|||++|.
T Consensus       153 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~  213 (231)
T 3aji_A          153 KMVHILLFYKASTNIQDTEGNTPLHLACD-------------EERVEEAKFLVTQGASIYIENKEEKTPLQVAK  213 (231)
T ss_dssp             HHHHHHHHTTCCSCCCCTTSCCHHHHHHH-------------TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSC
T ss_pred             HHHHHHHhcCCCccccCCCCCCHHHHHHH-------------CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            99999999999988876555444433322             22367788899999998    78999999996

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.94  E-value=1.1e-26  Score=207.37  Aligned_cols=193  Identities=16%  Similarity=0.041  Sum_probs=153.6

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..|..|+||||.|+..|+.++|+.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L  128 (351)
T 3utm_A           53 ASDGRKSTPLHLAAGYNRVRIVQLLLQH--GADVHAK-DKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPL  128 (351)
T ss_dssp             CSSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence            4567789999999999999999999987  3444444 556678888999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCC---------------------------------------------------------
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPL---------------------------------------------------------  131 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~---------------------------------------------------------  131 (263)
                      |+|+..|+.++|++|+++|+++.                                                         
T Consensus       129 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  208 (351)
T 3utm_A          129 HEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQP  208 (351)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCT
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCC
Confidence            99999999999999999887630                                                         


Q ss_pred             ------------C---CCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC
Q 037827          132 ------------D---GSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       132 ------------~---~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~  196 (263)
                                  .   +..+++..|+.. +..++.+|.+|.||||+|+++       ++.++++.|+..|++++..+..+
T Consensus       209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~ga~~n~~d~~g  280 (351)
T 3utm_A          209 QSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKNKDFMTPLHVAAER-------AHNDVMEVLHKHGAKMNALDSLG  280 (351)
T ss_dssp             TTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTS
T ss_pred             CCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCCCCcCCCC
Confidence                        0   335666667666 445678899999999999987       67799999999999988876555


Q ss_pred             CCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          197 AHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      .++.+.++.             ....++..+|+..|+|.    +.+.|||++|.
T Consensus       281 ~t~L~~A~~-------------~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~  321 (351)
T 3utm_A          281 QTALHRAAL-------------AGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN  321 (351)
T ss_dssp             CCHHHHHHH-------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred             CCHHHHHHH-------------cCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence            444433322             22367778899999998    88999999995

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.93  E-value=3.7e-26  Score=195.38  Aligned_cols=194  Identities=13%  Similarity=0.006  Sum_probs=157.9

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCC---cccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPN---ALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~---~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      ..|.+|+||||.|+..|+.++++.|++. ...   .++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~   79 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQ-VKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGN   79 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCC
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHH-hhccHHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCC
Confidence            4678899999999999999999999986 222   34443 556678888999999999999999999994 99999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCC---------------------CCCCHHHHHHHHHhCCCccccccC-CCchHHHHH
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTRAP---------------------LDGSDDVAYGLLRKHPKLAWAEIA-GTGKILELL  163 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a~p---------------------~~~~~~va~~Ll~~~~~~~~~~D~-~G~TPLHlA  163 (263)
                      ||||+|+..|+.+++++|+..++++                     ..++.+++..|++.+.. ++.+|. +|.||||+|
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A  158 (236)
T 1ikn_D           80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLA  158 (236)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHH
Confidence            9999999999999999999988631                     56788999999988544 677786 999999999


Q ss_pred             hcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc------cc
Q 037827          164 SKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF------RV  237 (263)
Q Consensus       164 A~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  237 (263)
                      ++.       ++.++++.|+..|++++..+..+.++.+.++....             .++..+|+..|++.      ++
T Consensus       159 ~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~-------------~~~~~~Ll~~ga~~~~~~~~~~  218 (236)
T 1ikn_D          159 VDL-------QNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS-------------TRIQQQLGQLTLENLQMLPESE  218 (236)
T ss_dssp             HHT-------TCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC-------------HHHHHHHHTTSCGGGSSCCCCC
T ss_pred             HHc-------CCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc-------------hHHHHHHHHcchhhhhcCCccc
Confidence            997       67899999999999999887766666665554443             67788999999976      88


Q ss_pred             cCCccceec
Q 037827          238 STTPLTLAT  246 (263)
Q Consensus       238 ~~~~~~~~~  246 (263)
                      +.||.+.+.
T Consensus       219 ~~~~~~~~~  227 (236)
T 1ikn_D          219 DEESYDTES  227 (236)
T ss_dssp             TTTCCCCC-
T ss_pred             hHHHHhhhc
Confidence            999999885

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.93  E-value=2.6e-25  Score=192.68  Aligned_cols=196  Identities=15%  Similarity=0.013  Sum_probs=146.4

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR  110 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~  110 (263)
                      +..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus        36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~  111 (285)
T 1wdy_A           36 EEGGWTPLHNAVQMSREDIVELLLRH--GADPVLR-KKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFME  111 (285)
T ss_dssp             TTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHH
T ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHH
Confidence            55678888888888888888888886  3333333 455677778888888888888888888884 8888888888888


Q ss_pred             HHHcCCHHHHHHHHhCCCCC-------------------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827          111 AAKQGQRNVVCYLLEKTRAP-------------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK  165 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~a~p-------------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~  165 (263)
                      |+..|+.+++++|++.++++                         ..++.+++..|+...+..++.+|..|.||||+|+.
T Consensus       112 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~  191 (285)
T 1wdy_A          112 AAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL  191 (285)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence            88888888888888887652                         34677888888887666678888889999998888


Q ss_pred             CCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh-hhccc----cccCC
Q 037827          166 RPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH-WFVSF----RVSTT  240 (263)
Q Consensus       166 ~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~  240 (263)
                      .+..   .....+++.|+..|++++..+..+.++.+.++.             ....++...|+. .|+++    +.+.|
T Consensus       192 ~~~~---~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~~g~~~~~~~~~g~t  255 (285)
T 1wdy_A          192 SSDD---SDVEAITHLLLDHGADVNVRGERGKTPLILAVE-------------KKHLGLVQRLLEQEHIEINDTDSDGKT  255 (285)
T ss_dssp             CSCT---TTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHH-------------TTCHHHHHHHHHSSSCCTTCCCTTSCC
T ss_pred             cccc---chHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH-------------cCCHHHHHHHHhccCCCccccCCCCCc
Confidence            7421   122688888888888887765444333332221             222566677777 78888    78999


Q ss_pred             ccceec
Q 037827          241 PLTLAT  246 (263)
Q Consensus       241 ~~~~~~  246 (263)
                      ||++|.
T Consensus       256 ~l~~A~  261 (285)
T 1wdy_A          256 ALLLAV  261 (285)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999996

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.93  E-value=1.3e-24  Score=179.76  Aligned_cols=145  Identities=21%  Similarity=0.173  Sum_probs=122.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      ++|+.||+.|+.++|+.||+.  +..++.. +..|.+..++|+..|+.+++++|+++|+++ +.+|.+|+||||+|+..|
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~--Gadvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g   81 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIEN--GADVNAS-DSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENG   81 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcC
Confidence            469999999999999999987  4555555 666788888999999999999999999995 999999999999999999


Q ss_pred             CHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHH
Q 037827          116 QRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWK  180 (263)
Q Consensus       116 ~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~  180 (263)
                      +.++|++|+++|+++               ..++.+++..|++.+ ..++.+|.+|.||||+|+++       ++.++++
T Consensus        82 ~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~-------g~~~iv~  153 (169)
T 4gpm_A           82 HKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREH-------GNEEVVK  153 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHHHH
T ss_pred             CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHc-------CCHHHHH
Confidence            999999999999862               678889999999875 45788999999999999997       6789999


Q ss_pred             HHcccCCCCCCC
Q 037827          181 GLLYQWIPVQEE  192 (263)
Q Consensus       181 ~li~~~~~v~~~  192 (263)
                      .|+..|++||.-
T Consensus       154 ~Ll~~GA~ie~~  165 (169)
T 4gpm_A          154 LLEKQGGWLEHH  165 (169)
T ss_dssp             HHHTC-------
T ss_pred             HHHHCCCCcCCC
Confidence            999999998754

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.92  E-value=2e-25  Score=200.79  Aligned_cols=158  Identities=13%  Similarity=-0.012  Sum_probs=104.6

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC--------------
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL--------------   96 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l--------------   96 (263)
                      +.++.|+||.|++.|++++|+.||+.  +..++...+..|.+..++||..|+.++|++|+++|+++              
T Consensus        22 ~~~~~t~L~~Av~~g~~~~V~~LL~~--Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~   99 (337)
T 4g8k_A           22 AVEDNHLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA   99 (337)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             CCCCChHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence            34567888888888888888888876  34454443444677778888888888888888887752              


Q ss_pred             ------------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-------------------------CCC
Q 037827           97 ------------------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP-------------------------LDG  133 (263)
Q Consensus        97 ------------------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p-------------------------~~~  133 (263)
                                        ++.+|..|+||||+|+..|+.+++++|+.+|+++                         ..|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g  179 (337)
T 4g8k_A          100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG  179 (337)
T ss_dssp             HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred             HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence                              2445566777777777777777777777776641                         235


Q ss_pred             CHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCC
Q 037827          134 SDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEY  193 (263)
Q Consensus       134 ~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~  193 (263)
                      +.+++..|+.+.+..++.+|..|.||||.++.....   +....+++.|+..|++++..+
T Consensus       180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~---~~~~~i~~lLl~~gad~n~~d  236 (337)
T 4g8k_A          180 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD---SDVEAITHLLLDHGADVNVRG  236 (337)
T ss_dssp             CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT---TTHHHHHHHHHHTTCCTTCCC
T ss_pred             CHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc---ccHHHHHHHHHHCCCCCCCcC
Confidence            566666666655555666677777777665543211   123346666666676666654

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.92  E-value=6.8e-25  Score=195.82  Aligned_cols=200  Identities=14%  Similarity=0.098  Sum_probs=162.5

Q ss_pred             hhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           26 EKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        26 ~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      .....+..+.++||.|+..|+.+.++.++.. .+..++.. +..|....++||..|+.++|++|+++|+++ +.+|..|+
T Consensus        16 ~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~   92 (351)
T 3utm_A           16 KAVLTGEYKKDELLEAARSGNEEKLMALLTP-LNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGL   92 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCC
T ss_pred             eeeeeccccchhHHHHHHcCCHHHHHHHHHh-cCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCC
Confidence            3456677889999999999999999999987 55565554 556788889999999999999999999995 99999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCcccc-------------------
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWA-------------------  151 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~-------------------  151 (263)
                      ||||+|+..|+.++|++|+++++++               ..++.+++..|++.+.. ++.                   
T Consensus        93 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~~~l~~a~~~~~~~  171 (351)
T 3utm_A           93 VPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAVDMAPTPELRE  171 (351)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCSSHHHHH
T ss_pred             cHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCcchHHHhhhhhHH
Confidence            9999999999999999999999862               57889999999987543 232                   


Q ss_pred             -----------------------------------ccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC
Q 037827          152 -----------------------------------EIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       152 -----------------------------------~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~  196 (263)
                                                         .+..|.||||+|+...+    .+...+++.|+..|++++..+..+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~----~~~~~~~~~Ll~~g~~~~~~~~~g  247 (351)
T 3utm_A          172 RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLH----PKRKQVAELLLRKGANVNEKNKDF  247 (351)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCS----TTHHHHHHHHHHTTCCTTCCCTTC
T ss_pred             HHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhC----ccHHHHHHHHHHcCCCcCCcCCCC
Confidence                                               24667888888887743    267899999999999998876555


Q ss_pred             CCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          197 AHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      .++.+.++.             ....++..+|+..|+++    +.+.|||++|.
T Consensus       248 ~t~L~~A~~-------------~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~  288 (351)
T 3utm_A          248 MTPLHVAAE-------------RAHNDVMEVLHKHGAKMNALDSLGQTALHRAA  288 (351)
T ss_dssp             CCHHHHHHH-------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCHHHHHHH-------------cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            444433322             22267788889999999    78899999995

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.92  E-value=4.2e-25  Score=200.62  Aligned_cols=192  Identities=11%  Similarity=-0.028  Sum_probs=157.7

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ...|.+|+||||.||..|+.++|+.|++.  +..++.. +..|....++||..|+.++|++|+++|+++ +  +.+|+||
T Consensus        14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~--~~~g~t~   87 (364)
T 3ljn_A           14 IKSDDENMEKIHVAARKGQTDEVRRLIET--GVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVH-S--LWHGQKP   87 (364)
T ss_dssp             --CCHHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-C--CBTTBCH
T ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-c--ccCCCCH
Confidence            45688899999999999999999999987  3444444 556788889999999999999999999974 3  3579999


Q ss_pred             HHHHHHcCCHHHHHHHHhC----CCC---------------------------C-----CCC--CHHHHHHHHHhCCCcc
Q 037827          108 IHRAAKQGQRNVVCYLLEK----TRA---------------------------P-----LDG--SDDVAYGLLRKHPKLA  149 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~----~a~---------------------------p-----~~~--~~~va~~Ll~~~~~~~  149 (263)
                      ||+|+..|+.++|++|+..    +++                           |     ..+  +.+++..|+..+ ..+
T Consensus        88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a~~  166 (364)
T 3ljn_A           88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-ASP  166 (364)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-CCT
T ss_pred             HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-CCC
Confidence            9999999999999999997    332                           1     466  899999999984 557


Q ss_pred             ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC-----CCCCCCCCCCCCCCCCChhhhhhhccccccccchhh
Q 037827          150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP-----VQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFEL  224 (263)
Q Consensus       150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~-----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                      +.+|.+|.||||+|++.       ++.++++.|+..|++     ++..+..+.++.+.++....             .++
T Consensus       167 ~~~d~~g~t~L~~A~~~-------g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~-------------~~~  226 (364)
T 3ljn_A          167 TAKDKADETPLMRAMEF-------RNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW-------------EDV  226 (364)
T ss_dssp             TCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC-------------HHH
T ss_pred             cccCCCCCCHHHHHHHc-------CCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC-------------HHH
Confidence            88999999999999997       778999999999988     77776655555554443322             667


Q ss_pred             hHHHHhhhccc----cccCCccceec
Q 037827          225 AYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       225 ~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ..+|+..|+|+    +.+.|||++|.
T Consensus       227 v~~Ll~~gad~~~~d~~g~tpL~~A~  252 (364)
T 3ljn_A          227 AMRFVEMGIDVNMEDNEHTVPLYLSV  252 (364)
T ss_dssp             HHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            78888999998    78999999995

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.92  E-value=1.8e-24  Score=183.52  Aligned_cols=182  Identities=18%  Similarity=0.056  Sum_probs=152.9

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L  110 (231)
T 3aji_A           35 RTDQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDK-DDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPL  110 (231)
T ss_dssp             CCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             cCCCCCCCHHHHHHHcCcHHHHHHHHHh--CCCCCCc-CCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHH
Confidence            4577899999999999999999999987  3344443 556678889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+|+..|+.+++++|+++++++               ..++.+++..|+.. +..++.+|.+|.||||+|++.       
T Consensus       111 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~-------  182 (231)
T 3aji_A          111 HYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTPLHLACDE-------  182 (231)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHT-------
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCHHHHHHHC-------
Confidence            9999999999999999999862               46788999999886 455788999999999999997       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF  235 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++.++++.|+..|++++..+..+.++.+.++....             .++..+|+..++|+
T Consensus       183 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~-------------~~i~~lL~~~~a~i  231 (231)
T 3aji_A          183 ERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLG-------------LILKRLAEGEEASM  231 (231)
T ss_dssp             TCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHH-------------HHHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHH-------------HHHHHHHccccccC
Confidence            67899999999999998876655555544433333             67788888888875

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.92  E-value=4.2e-25  Score=205.07  Aligned_cols=206  Identities=18%  Similarity=0.119  Sum_probs=145.8

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|++++|++|++.  +..++.. +..+....++||..|+.+++++|+++|+++ +.+|.+|+|||
T Consensus         9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L   84 (437)
T 1n11_A            9 GGGESGLTPLHVASFMGHLPIVKNLLQR--GASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPL   84 (437)
T ss_dssp             ------CCHHHHHHHHTCHHHHHHHHHT--TCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHH
T ss_pred             ccCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHH
Confidence            4577899999999999999999999987  2333333 445677788999999999999999999994 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+|+..|+.++|++|+++|+++               ..++.+++..|+..+.. ....+..|.||||+|++.       
T Consensus        85 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~-------  156 (437)
T 1n11_A           85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKY-------  156 (437)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHT-------
T ss_pred             HHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHHc-------
Confidence            9999999999999999988862               45778888888877543 466788888999988887       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCCCCCCCCCC----------------Chh--hhhhhccccccccc--hhhhHHHHhhhc
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENV----------------DGD--LEKQLSETSHSAFG--FELAYLLLHWFV  233 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~----------------~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~  233 (263)
                      +++++++.|+..+++++..+..+.++.+.++                +.+  ...+.+.+.+++..  .++...|+..|+
T Consensus       157 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~  236 (437)
T 1n11_A          157 GKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG  236 (437)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            6778888888888888776543333222211                100  01111222223322  456666777777


Q ss_pred             cc----cccCCccceec
Q 037827          234 SF----RVSTTPLTLAT  246 (263)
Q Consensus       234 ~~----~~~~~~~~~~~  246 (263)
                      +.    ..+.|||++|.
T Consensus       237 ~~~~~~~~g~t~L~~A~  253 (437)
T 1n11_A          237 SANAESVQGVTPLHLAA  253 (437)
T ss_dssp             CTTCCCTTCCCHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHH
Confidence            77    56788888885

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.92  E-value=1.2e-24  Score=188.42  Aligned_cols=196  Identities=15%  Similarity=0.085  Sum_probs=155.9

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR  110 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~  110 (263)
                      +.+|.++||.|+..|++++++.|++. . ..++...+..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus         2 ~~~g~~~L~~A~~~g~~~~v~~Ll~~-g-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~   78 (285)
T 1wdy_A            2 AVEDNHLLIKAVQNEDVDLVQQLLEG-G-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLL   78 (285)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHT-T-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred             CcccchHHHHHHHcCCHHHHHHHHHc-C-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence            45689999999999999999999997 3 3344443556678889999999999999999999995 9999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccc----------cCCCchHHHHHhc
Q 037827          111 AAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAE----------IAGTGKILELLSK  165 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~----------D~~G~TPLHlAA~  165 (263)
                      |+..|+.+++++|+++|+++               ..+..+++..|+..+.. ++..          +..|.||||+|++
T Consensus        79 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~  157 (285)
T 1wdy_A           79 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAE  157 (285)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHH
Confidence            99999999999999999862               57888999999988654 3444          7889999999999


Q ss_pred             CCCCCcCCcchHHHHHHccc-CCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCC
Q 037827          166 RPKAFASGIRLGYWKGLLYQ-WIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTT  240 (263)
Q Consensus       166 ~~~~f~s~~~~~~~~~li~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  240 (263)
                      .       ++.++++.|+.. +.+++..+..+.++.+.++.....         ....++..+|+..|+++    +.+.|
T Consensus       158 ~-------~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~---------~~~~~i~~~Ll~~g~~~~~~~~~g~t  221 (285)
T 1wdy_A          158 K-------GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD---------SDVEAITHLLLDHGADVNVRGERGKT  221 (285)
T ss_dssp             H-------TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT---------TTHHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred             c-------CCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc---------chHHHHHHHHHHcCCCCCCcCCCCCc
Confidence            7       678999999987 888887765443332221100000         00045677888999998    67999


Q ss_pred             ccceec
Q 037827          241 PLTLAT  246 (263)
Q Consensus       241 ~~~~~~  246 (263)
                      |||+|.
T Consensus       222 ~L~~A~  227 (285)
T 1wdy_A          222 PLILAV  227 (285)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999995

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.92  E-value=9.8e-25  Score=202.61  Aligned_cols=192  Identities=18%  Similarity=0.127  Sum_probs=132.9

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      .+..|+||||.|+..|+.++++.|++.  +...... +..|....++|+..|+.+++++|++.|+++ +.+|..|+||||
T Consensus       175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~  250 (437)
T 1n11_A          175 AGKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLH  250 (437)
T ss_dssp             CCSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence            344566666666666666666666655  1222222 233455566788888888888888888874 778888888888


Q ss_pred             HHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCc
Q 037827          110 RAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGI  174 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~  174 (263)
                      +|+..|+.++|++|+++++++               ..++.+++..|++.+ ..++.+|..|.||||+|+++       +
T Consensus       251 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-------g  322 (437)
T 1n11_A          251 LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGYTPLHVASHY-------G  322 (437)
T ss_dssp             HHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCSSCCCHHHHHHHS-------S
T ss_pred             HHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-ccCCCCCCCCCCHHHHHHHc-------C
Confidence            888888888888888777652               456677777777764 44577788888888888876       5


Q ss_pred             chHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          175 RLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       175 ~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +.++++.|+..|++++..+..+.++.+.++             .....++..+|+..|+|.    +.++|||++|.
T Consensus       323 ~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~-------------~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~  385 (437)
T 1n11_A          323 NIKLVKFLLQHQADVNAKTKLGYSPLHQAA-------------QQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK  385 (437)
T ss_dssp             CSHHHHHHHHTTCCTTCCCTTSCCHHHHHH-------------HTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred             cHHHHHHHHhcCCCCCCCCCCCCCHHHHHH-------------HCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence            668888888888888777654443332222             122366777888899998    78999999995

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.91  E-value=2.1e-24  Score=182.15  Aligned_cols=175  Identities=13%  Similarity=0.013  Sum_probs=126.9

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      .+.+|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++++..++.+|..|+||||
T Consensus        21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~   97 (223)
T 2f8y_A           21 TDRTGETALHLAARYSRSDAAKRLLEA--SADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI   97 (223)
T ss_dssp             CTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHH
T ss_pred             cCCCCCchHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHH
Confidence            367899999999999999999999987  3344333 5566788899999999999999999998336999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCC
Q 037827          110 RAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPV  189 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v  189 (263)
                      +|+..|+.+++++|++++++                   ++.+|.+|.||||+|+..       ++.++++.|+..|+++
T Consensus        98 ~A~~~~~~~~~~~Ll~~g~~-------------------~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~  151 (223)
T 2f8y_A           98 LAARLAVEGMLEDLINSHAD-------------------VNAVDDLGKSALHWAAAV-------NNVDAAVVLLKNGANK  151 (223)
T ss_dssp             HHHHHTCHHHHHHHHHTTCC-------------------TTCBCTTSCBHHHHHHHT-------TCHHHHHHHHHTTCCT
T ss_pred             HHHHhCcHHHHHHHHHcCCC-------------------CcCcCCCCCcHHHHHHHc-------CCHHHHHHHHHcCCCC
Confidence            99999999999999765443                   445566666777766665       4566666666666666


Q ss_pred             CCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          190 QEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +..+..+.++.+.++..             ...++..+|+..|++.    +.+.|||++|.
T Consensus       152 ~~~~~~g~t~L~~A~~~-------------~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~  199 (223)
T 2f8y_A          152 DMQNNREETPLFLAARE-------------GSYETAKVLLDHFANRDITDHMDRLPRDIAQ  199 (223)
T ss_dssp             TCCCTTCCCHHHHHHHH-------------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             CCcCCCCcCHHHHHHHc-------------CCHHHHHHHHHcCCCCccccccCCCHHHHHH
Confidence            65543333332222211             1245555666666666    45667777764

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.91  E-value=8.8e-25  Score=188.42  Aligned_cols=186  Identities=13%  Similarity=-0.004  Sum_probs=139.5

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+.++.||||.|+..|+.++|+.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpL   91 (229)
T 2vge_A           16 RARLNPLVLLLDAALTGELEVVQQAVKE--MNDPSQP-NEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPL   91 (229)
T ss_dssp             CTTSCHHHHHHHHHHHTCHHHHHHHHHH--SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred             ccccchhHHHHHHHHcCCHHHHHHHHhc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence            3467789999999999999999999987  3444444 566788889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc-CCCchHHHHH--hcCCCCCcCCcchHHHHHHccc
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELL--SKRPKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlA--A~~~~~f~s~~~~~~~~~li~~  185 (263)
                      |+|+..|+.++|++|++.|+                   .++.+| .+|.||||+|  +..       ++.++++.|+..
T Consensus        92 h~A~~~g~~~~v~~Ll~~ga-------------------~~~~~~~~~g~tpL~~A~a~~~-------~~~~~v~~Ll~~  145 (229)
T 2vge_A           92 HCAASCNDTVICMALVQHGA-------------------AIFATTLSDGATAFEKCDPYRE-------GYADCATYLADV  145 (229)
T ss_dssp             HHHHHTTCHHHHHHHHTTTC-------------------CTTCCCSSTTCCTGGGCCTTST-------THHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCC-------------------CcccccCCCCCCHHHHHHHHhc-------ChHHHHHHHHHc
Confidence            99999999999999975443                   345554 6999999999  665       788999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc------cccCCccceec-------------
Q 037827          186 WIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF------RVSTTPLTLAT-------------  246 (263)
Q Consensus       186 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------------  246 (263)
                      |++++..+..+.++.+..+....                ..+|+..|++.      ..|.|||++|.             
T Consensus       146 ga~~~~~~~~~~~~l~~~~~~~~----------------~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l  209 (229)
T 2vge_A          146 EQSMGLMNSGAVYALWDYSAEFG----------------DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF  209 (229)
T ss_dssp             HHHTTTSGGGEEEESSCBCCSST----------------TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred             CCCcccccCCchHHHHHHhhccc----------------cccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence            99998886444333332222221                13556778873      56999999992             


Q ss_pred             ---cccccCchhhhhhh
Q 037827          247 ---NDVRLPHSKIQYLH  260 (263)
Q Consensus       247 ---~~~~~~~~~~~~~~  260 (263)
                         +.++-|.||+..-|
T Consensus       210 ~~~p~~~~~~~~~~~~~  226 (229)
T 2vge_A          210 GLFPRVKPQRSKVKHHH  226 (229)
T ss_dssp             ESSCCCC----------
T ss_pred             hhCCCCCCchhhccccc
Confidence               56677777765443

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.91  E-value=3.2e-24  Score=181.55  Aligned_cols=194  Identities=16%  Similarity=0.057  Sum_probs=156.2

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      .|..+.++|+.|+..|+.++++.|++.  +..++.. +..|..+.++|+..|+.+++++|+++|+++....+..|+||||
T Consensus         5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~   81 (240)
T 3eu9_A            5 IDDYSTWDIVKATQYGIYERCRELVEA--GYDVRQP-DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH   81 (240)
T ss_dssp             CSCGGGCCHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred             cccccchHHHHHHHcCChHHHHHHHHc--CCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence            467788999999999999999999997  3344333 5566788889999999999999999999964455667999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCc
Q 037827          110 RAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGI  174 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~  174 (263)
                      +|+..|+.+++++|++.++++               ..+..+++..|++.+ ..++.+|.+|.||||+|+.++      .
T Consensus        82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~------~  154 (240)
T 3eu9_A           82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRT------H  154 (240)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHC------C
T ss_pred             HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhC------C
Confidence            999999999999999998862               567889999999874 446788999999999999763      3


Q ss_pred             chHHHHHHcccCCCCCCCCC-CCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          175 RLGYWKGLLYQWIPVQEEYN-PHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       175 ~~~~~~~li~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ...+++.|+..+.+++..+. .+.++.+.++             .....++..+|+..|+|+    +.+.|||++|.
T Consensus       155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~-------------~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~  218 (240)
T 3eu9_A          155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAV-------------LAGNTTVISLLLEAGANVDAQNIKGESALDLAK  218 (240)
T ss_dssp             SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHH-------------HHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHH
T ss_pred             hHHHHHHHHhcCCCcchhhccCCCcHHHHHH-------------HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence            46889999999988887754 3333332222             222367788899999999    78899999995

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.91  E-value=1.8e-23  Score=176.79  Aligned_cols=172  Identities=15%  Similarity=-0.044  Sum_probs=148.4

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC--CCCCCCCCCCCCcH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE--ADLPNVRDEENLLP  107 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g--a~l~~~~d~~G~TP  107 (263)
                      .+..|+||||.|+..|+.++++.|++.+....+....+..|....++|+..|+.+++++|+++|  +++ +.+|..|+||
T Consensus        32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~  110 (228)
T 2dzn_A           32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTC  110 (228)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCH
Confidence            5788999999999999999999999982112333323556788889999999999999999999  884 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      ||+|+..|+.+++++|+++|+++               ..+..+++..|++.++..++.+|.+|.||||+|++.      
T Consensus       111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~------  184 (228)
T 2dzn_A          111 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE------  184 (228)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT------
T ss_pred             HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc------
Confidence            99999999999999999999862               578899999999887677889999999999999997      


Q ss_pred             CcchHHHHHHc-ccCCCCCCCCCCCCCCCCCCCChhhh
Q 037827          173 GIRLGYWKGLL-YQWIPVQEEYNPHAHAHSENVDGDLE  209 (263)
Q Consensus       173 ~~~~~~~~~li-~~~~~v~~~~~~~~~~~~~~~~~~~~  209 (263)
                       ++.++++.|+ ..|++++..+..+.++.+.++..+..
T Consensus       185 -~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~  221 (228)
T 2dzn_A          185 -GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVK  221 (228)
T ss_dssp             -TCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHH
T ss_pred             -CCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHH
Confidence             6789999999 88999999988787787777766543

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.91  E-value=1.3e-23  Score=174.55  Aligned_cols=163  Identities=16%  Similarity=0.067  Sum_probs=137.7

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      ..+.+|||.|+..|+.+.++.|+.. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A   79 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQD-TTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA   79 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTC-TTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred             cccccHHHHHHHhccHHHHHHHHHc-CCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence            4578999999999999999999998 55455554 556788889999999999999999999995 99999999999999


Q ss_pred             HHcCCHHHHHHHHh-CCCC----------C-----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcc
Q 037827          112 AKQGQRNVVCYLLE-KTRA----------P-----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIR  175 (263)
Q Consensus       112 a~~g~~evv~~Ll~-~~a~----------p-----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~  175 (263)
                      +..|+.+++++|+. .+.+          |     ..++.+++..|++.++..++.+|.+|.||||+|+..+..  ..++
T Consensus        80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~--~~~~  157 (201)
T 3hra_A           80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG--NQLY  157 (201)
T ss_dssp             HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCC--SHHH
T ss_pred             HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccc--hhhH
Confidence            99999999999995 4433          1     678899999999998677899999999999999987431  1234


Q ss_pred             hHHHHHHcccCCCCCCCCCCCCCC
Q 037827          176 LGYWKGLLYQWIPVQEEYNPHAHA  199 (263)
Q Consensus       176 ~~~~~~li~~~~~v~~~~~~~~~~  199 (263)
                      .++++.|+..|++++..+..+.++
T Consensus       158 ~~~v~~Ll~~ga~~~~~~~~g~t~  181 (201)
T 3hra_A          158 QDIVKLLMENGADQSIKDNSGRTA  181 (201)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             HHHHHHHHHCCCCCCccCCCCCCH
Confidence            899999999999998876544433

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.90  E-value=3.3e-23  Score=176.25  Aligned_cols=168  Identities=13%  Similarity=0.031  Sum_probs=145.9

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC----CCCCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEA----DLPNVRDEEN  104 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga----~l~~~~d~~G  104 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|++.++    + ++.+|..|
T Consensus        41 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g  116 (241)
T 1k1a_A           41 IYNNLRQTPLHLAVITTLPSVVRLLVTA--GASPMAL-DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD-LEARNYDG  116 (241)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTS
T ss_pred             cccccCCCHHHHHHHcCCHHHHHHHHHc--CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-ccccCcCC
Confidence            4567899999999999999999999987  3444333 5566888899999999999999999998    7 49999999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCC
Q 037827          105 LLPIHRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPK  168 (263)
Q Consensus       105 ~TPLh~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~  168 (263)
                      +||||+|+..|+.+++++|++.++++                ..+..+++..|++.+ ..++.+|.+|.||||+|++.  
T Consensus       117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~--  193 (241)
T 1k1a_A          117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGR--  193 (241)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHH--
T ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHc--
Confidence            99999999999999999999999862                567889999999874 55788999999999999987  


Q ss_pred             CCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827          169 AFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL  208 (263)
Q Consensus       169 ~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  208 (263)
                           ++.++++.|+..|++++..+..+.++.+.++....
T Consensus       194 -----~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~  228 (241)
T 1k1a_A          194 -----GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV  228 (241)
T ss_dssp             -----TCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred             -----CCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc
Confidence                 67899999999999999988777777777776655

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.90  E-value=7.4e-24  Score=172.58  Aligned_cols=160  Identities=13%  Similarity=0.077  Sum_probs=123.3

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAK  113 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~  113 (263)
                      +.+|||.|+..|+.+.++.|++. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~   78 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRK-GDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLAST   78 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTT-CSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHH
T ss_pred             chhhHHHHHHcCCHHHHHHHHHc-CcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHH
Confidence            46899999999999999999998 55545444 566788889999999999999999999995 9999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCC
Q 037827          114 QGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEY  193 (263)
Q Consensus       114 ~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~  193 (263)
                      .|+.+++++|+++++                   .++.+|.+|.||||+|++.       ++.++++.|+..|++++..+
T Consensus        79 ~~~~~~v~~Ll~~g~-------------------~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~~  132 (172)
T 3v30_A           79 GGYTDIVGLLLERDV-------------------DINIYDWNGGTPLLYAVRG-------NHVKCVEALLARGADLTTEA  132 (172)
T ss_dssp             TTCHHHHHHHHTTTC-------------------CTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCC
T ss_pred             CCCHHHHHHHHHcCC-------------------CCCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCccccC
Confidence            999999999975543                   3566677888888888876       66788888888887777665


Q ss_pred             CCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827          194 NPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF  235 (263)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ..+.++.+.++.             ....++..+|+..++++
T Consensus       133 ~~g~t~l~~A~~-------------~~~~~~~~~L~~~~~~~  161 (172)
T 3v30_A          133 DSGYTPMDLAVA-------------LGYRKVQQVIENHILKL  161 (172)
T ss_dssp             TTSCCHHHHHHH-------------HTCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHH-------------hCcHHHHHHHHHHHHHH
Confidence            433333322221             12256677777777776

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.90  E-value=2.1e-23  Score=181.23  Aligned_cols=165  Identities=11%  Similarity=-0.009  Sum_probs=135.4

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC-----------
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL-----------   96 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l-----------   96 (263)
                      ...+..|+||||+|+..|+.++|+.|++.  +..++.. +..|....++|+..|+.+++++|+++|++.           
T Consensus        39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~  115 (282)
T 1oy3_D           39 DLQNDLGQTALHLAAILGEASTVEKLYAA--GAGVLVA-ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ  115 (282)
T ss_dssp             GCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCC-CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhc
Confidence            34677899999999999999999999997  3444444 556788889999999999999999988651           


Q ss_pred             -----------------------------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------
Q 037827           97 -----------------------------------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP-----------  130 (263)
Q Consensus        97 -----------------------------------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p-----------  130 (263)
                                                         ++.+|..|+||||+|+..|+.++|++|+++|+++           
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp  195 (282)
T 1oy3_D          116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP  195 (282)
T ss_dssp             ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred             ccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCH
Confidence                                               3788999999999999999999999999999862           


Q ss_pred             -----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCC
Q 037827          131 -----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSEN  203 (263)
Q Consensus       131 -----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~  203 (263)
                           ..++.+++..|+.. +..++.+|.+|.||||+|+++       ++.++++.|+..|++++..+..+.+|.+.+
T Consensus       196 L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a  265 (282)
T 1oy3_D          196 LHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLR-------PNPILARLLRAHGAPEPEDGGDKLSPCSSS  265 (282)
T ss_dssp             HHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTS-------SCHHHHHHHHHTTCCCCCCC----------
T ss_pred             HHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHc-------CCcHHHHHHHHcCCCcCcCCCccccccccc
Confidence                 56788999999987 455789999999999999987       778999999999999999986665555543

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.90  E-value=1.2e-23  Score=178.85  Aligned_cols=184  Identities=14%  Similarity=-0.006  Sum_probs=139.4

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCC----CCCCCCCCcHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLP----NVRDEENLLPI  108 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~----~~~d~~G~TPL  108 (263)
                      .|+||||.|+..|+.++++.|++. .+..++.. +..|....++||..|+.+++++|+++|+++.    +.+|..|+|||
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~-~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L   79 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKF-EGCEVHQR-GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL   79 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTT-TCSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHh-cCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence            578999999999999999999987 56666555 5667888899999999999999999998731    66788999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC----------------------------CCCCHHHHHHHHHhCCCccccccCCCchHH
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP----------------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKIL  160 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p----------------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPL  160 (263)
                      |+|+..|+.++|++|+++|+++                            ..++.+++..|++. +..++.+|.+|.|||
T Consensus        80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L  158 (232)
T 2rfa_A           80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIRAQDSLGNTVL  158 (232)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence            9999999999999999998862                            23567788888877 455788999999999


Q ss_pred             HHHhcCCCCCcCCcchHHH----HHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhcccccccc--chhhhHHHHhhhcc
Q 037827          161 ELLSKRPKAFASGIRLGYW----KGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAF--GFELAYLLLHWFVS  234 (263)
Q Consensus       161 HlAA~~~~~f~s~~~~~~~----~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  234 (263)
                      |+|+..       ++.+++    +.|+..|++++...-.  .    ..   +..+.+.+.++..  ..++..+|+..|++
T Consensus       159 ~~A~~~-------~~~~~~~~i~~~Ll~~g~~~~~~~~~--~----~~---~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~  222 (232)
T 2rfa_A          159 HILILQ-------PNKTFACQMYNLLLSYDGGDHLKSLE--L----VP---NNQGLTPFKLAGVEGNIVMFQHLMQKRKH  222 (232)
T ss_dssp             HHHHTC-------SCHHHHHHHHHHHHHTTCSCSSCCGG--G----CC---CTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHc-------CChHHHHHHHHHHHhcCCchhhhhhh--c----cC---CCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            999987       556666    9999998876422100  0    00   1111222333333  36667778888877


Q ss_pred             c
Q 037827          235 F  235 (263)
Q Consensus       235 ~  235 (263)
                      .
T Consensus       223 ~  223 (232)
T 2rfa_A          223 I  223 (232)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.90  E-value=4.5e-23  Score=166.85  Aligned_cols=148  Identities=14%  Similarity=0.095  Sum_probs=124.3

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+.++.++||.|+..|+.+.++.|++. .+...... +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus         3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L   79 (165)
T 3twr_A            3 MGNSEADRQLLEAAKAGDVETVKKLCTV-QSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPL   79 (165)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             CCcchhhHHHHHHHHhCCHHHHHHHHHc-CCCCcccc-ccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHH
Confidence            3567889999999999999999999987 45444333 445578888999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      |+|+..|+.++|++|++++                   ..++.+|.+|.||||+|++.       ++.++++.|+..|++
T Consensus        80 ~~A~~~~~~~~v~~Ll~~g-------------------~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~  133 (165)
T 3twr_A           80 HNACSYGHYEVAELLVKHG-------------------AVVNVADLWKFTPLHEAAAK-------GKYEICKLLLQHGAD  133 (165)
T ss_dssp             HHHHHTTCHHHHHHHHHTT-------------------CCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCC
T ss_pred             HHHHHcCcHHHHHHHHhCC-------------------CCCCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCC
Confidence            9999999999999997543                   34577889999999999997       678999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC
Q 037827          189 VQEEYNPHAHAHSENVD  205 (263)
Q Consensus       189 v~~~~~~~~~~~~~~~~  205 (263)
                      ++..+..+.++.+.++.
T Consensus       134 ~~~~~~~g~t~l~~a~~  150 (165)
T 3twr_A          134 PTKKNRDGNTPLDLVKD  150 (165)
T ss_dssp             TTCCCTTSCCTGGGSCT
T ss_pred             CcccCCCCCChhHhHhc
Confidence            99888777666665544

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.90  E-value=9.7e-25  Score=200.34  Aligned_cols=210  Identities=15%  Similarity=0.094  Sum_probs=162.1

Q ss_pred             hhhc-ccChHHHHHHHHcCCHHHHHHHHh-------ccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCC
Q 037827           28 IIKD-IANYKQVTRYLLEDDWKGLEDYIM-------SKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNV   99 (263)
Q Consensus        28 ~~~~-~~~~t~Lh~Aa~~G~~e~v~~Ll~-------~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~   99 (263)
                      ...+ ..|+||||+|+..|+.++++.|+.       . .+..++.. +..|....++||..|+.++|++|+++|+++ +.
T Consensus       118 n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~-~ga~vn~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~  194 (373)
T 2fo1_E          118 NIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA-AGADVNAM-DCDENTPLMLAVLARRRRLVAYLMKAGADP-TI  194 (373)
T ss_dssp             TTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHH-TCCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CC
T ss_pred             cccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHh-cCCCCcCC-CCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cc
Confidence            3455 689999999999999998888873       2 34555554 566788889999999999999999999995 99


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCC---------------CCC---CHHHHHHHHHhCCCcc-------cc
Q 037827          100 RDEENLLPIHRAAKQGQRNVVCYLLEKT---RAP---------------LDG---SDDVAYGLLRKHPKLA-------WA  151 (263)
Q Consensus       100 ~d~~G~TPLh~Aa~~g~~evv~~Ll~~~---a~p---------------~~~---~~~va~~Ll~~~~~~~-------~~  151 (263)
                      +|..|+||||+|+..|+.++|++|+.++   .+.               ..+   ..+++..|+..+....       ..
T Consensus       195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~  274 (373)
T 2fo1_E          195 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS  274 (373)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred             cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence            9999999999999999999999999876   221               233   7889999998865432       12


Q ss_pred             ccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC-CCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh
Q 037827          152 EIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW-IPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH  230 (263)
Q Consensus       152 ~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                      +|..|.||||+|+..       ++.++++.|+..+ ++++..+..+.++.+.++.             ....++..+|+.
T Consensus       275 ~d~~g~t~Lh~A~~~-------g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~-------------~g~~~iv~~Ll~  334 (373)
T 2fo1_E          275 EKYKGRTALHYAAQV-------SNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ-------------EGRIEVVMYLIQ  334 (373)
T ss_dssp             SSCCCCCTHHHHHSS-------CCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH-------------HTCHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHh-------CCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH-------------cCCHHHHHHHHH
Confidence            578999999999997       7789999999776 8888876555444433222             223677788899


Q ss_pred             hhccc----cccCCccceeccccccCchhhhhhhhc
Q 037827          231 WFVSF----RVSTTPLTLATNDVRLPHSKIQYLHQY  262 (263)
Q Consensus       231 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (263)
                      .|+|+    +.+.|||++|...=.  ..-++||+++
T Consensus       335 ~gad~~~~d~~g~t~l~~A~~~g~--~~iv~~Ll~~  368 (373)
T 2fo1_E          335 QGASVEAVDATDHTARQLAQANNH--HNIVDIFDRC  368 (373)
T ss_dssp             TTCCSSCCCSSSCCHHHHHHHTTC--HHHHHHHHTT
T ss_pred             cCCCccCCCCCCCCHHHHHHHcCC--HHHHHHHHhc
Confidence            99998    789999999962111  2345666654

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.90  E-value=6.1e-23  Score=168.63  Aligned_cols=162  Identities=15%  Similarity=-0.021  Sum_probs=135.1

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      .++.++||.|+..|+.+.++.|++. .+..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A   79 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDN-TENDLNQG-DDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLA   79 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHC-TTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhc-Cccccccc-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence            3568899999999999999999998 56656554 556788889999999999999999999995 99999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCC
Q 037827          112 AKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQE  191 (263)
Q Consensus       112 a~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~  191 (263)
                      +..|+.++|++|+++|+                   .++.+|.+|.||||+|+..       ++.++++.|+..|++++.
T Consensus        80 ~~~~~~~~v~~Ll~~g~-------------------~~~~~d~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~  133 (179)
T 3f6q_A           80 ASHGHRDIVQKLLQYKA-------------------DINAVNEHGNVPLHYACFW-------GQDQVAEDLVANGALVSI  133 (179)
T ss_dssp             HHTTCHHHHHHHHHTTC-------------------CTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCSSB
T ss_pred             HHcCCHHHHHHHHHcCC-------------------CCCccCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCcch
Confidence            99999999999975433                   3567788999999999987       677999999999999988


Q ss_pred             CCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827          192 EYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF  235 (263)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      .+..+.++.+.++....             .++..+|+..|+++
T Consensus       134 ~~~~g~tpl~~A~~~~~-------------~~~~~~L~~~g~~~  164 (179)
T 3f6q_A          134 CNKYGEMPVDKAKAPLR-------------ELLRERAEKMGQNL  164 (179)
T ss_dssp             CCTTSCCGGGGSCHHHH-------------HHHHHHHHHTTCCC
T ss_pred             hccCCCCcHHHHHHHHH-------------HHHHHHHHHhhcCc
Confidence            87777777666655544             67788888888888

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.90  E-value=5.5e-24  Score=188.47  Aligned_cols=200  Identities=10%  Similarity=0.000  Sum_probs=151.5

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ...|.+|+||||.|+..|+.++|+.|++.  +..++..   +|....++||..|+.+++++|+++|+++ +.+|..|+||
T Consensus        25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~   98 (285)
T 3kea_A           25 FKADVHGHSASYYAIADNNVRLVCTLLNA--GALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTA   98 (285)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred             CccCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcH
Confidence            36778899999999999999999999987  3444333   4677888999999999999999999994 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccC-CCchHHHHHhcCCCCC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIA-GTGKILELLSKRPKAF  170 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~-~G~TPLHlAA~~~~~f  170 (263)
                      ||+|+..|+.++|++|+++|+++                ..++.+++..|+..++..   .|. .|.||||+|++.    
T Consensus        99 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~----  171 (285)
T 3kea_A           99 LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKN----  171 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHHHHT----
T ss_pred             HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHHHHc----
Confidence            99999999999999999998862                456788888888876543   233 899999999987    


Q ss_pred             cCCcchHHHHHHcccCCCCCCCCCCCCCC-CCC----------------CCChhhhhhhccccccccchhhhHHHHhhhc
Q 037827          171 ASGIRLGYWKGLLYQWIPVQEEYNPHAHA-HSE----------------NVDGDLEKQLSETSHSAFGFELAYLLLHWFV  233 (263)
Q Consensus       171 ~s~~~~~~~~~li~~~~~v~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                         ++.++++.|+..|++++..+..+.++ .+.                ++|.+...   .........++..+|+..|+
T Consensus       172 ---g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~---~~a~~~~~~~iv~~Ll~~g~  245 (285)
T 3kea_A          172 ---GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN---LENVLLDDAEIAKMIIEKHV  245 (285)
T ss_dssp             ---TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT---GGGGTTTCHHHHHHHHHHHH
T ss_pred             ---ChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC---hhhhhcCCHHHHHHHHHcCC
Confidence               67799999999999988887555443 222                33333211   11122334677777888888


Q ss_pred             cc--cccCCccceec
Q 037827          234 SF--RVSTTPLTLAT  246 (263)
Q Consensus       234 ~~--~~~~~~~~~~~  246 (263)
                      ++  ....+.|.+++
T Consensus       246 ~~~~~~~~~~~~~~~  260 (285)
T 3kea_A          246 EYKSDSYTKDLDIVK  260 (285)
T ss_dssp             HHTTCTTTTTCHHHH
T ss_pred             CCCCccccchHHHHh
Confidence            87  34445555554

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.90  E-value=4.8e-23  Score=185.18  Aligned_cols=190  Identities=17%  Similarity=0.035  Sum_probs=143.3

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCCccccc--------------------------------ccCCcCHHHHHHHh
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACI--------------------------------IVDQSSIFEFIVAS   79 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~--------------------------------i~~~g~iv~~~AA~   79 (263)
                      ..|+||||.|+..|+.++|+.||+.  +..++..                                .+..|.+..++|+.
T Consensus        57 ~~g~TpLh~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~  134 (337)
T 4g8k_A           57 EGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAV  134 (337)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHH
T ss_pred             CCCcCHHHHHHHcCCHHHHHHHHHc--CCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHH
Confidence            3589999999999999999999987  2222221                                12223455669999


Q ss_pred             CCcHHHHHHHHHcCCCCCCCC----------CCCCCcHHHHHHHcCCHHHHHHHHh-CCCCC------------------
Q 037827           80 TGKLELISTLIRYEADLPNVR----------DEENLLPIHRAAKQGQRNVVCYLLE-KTRAP------------------  130 (263)
Q Consensus        80 ~G~~eiv~~Ll~~ga~l~~~~----------d~~G~TPLh~Aa~~g~~evv~~Ll~-~~a~p------------------  130 (263)
                      .|+.+++++|+++|+++ +.+          +..|+||||+|+..|+.++|++|+. .|+++                  
T Consensus       135 ~~~~~~~~~ll~~ga~~-~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~  213 (337)
T 4g8k_A          135 YGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS  213 (337)
T ss_dssp             TTCHHHHHHHHHTTCCT-TCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHS
T ss_pred             cCcHHHHHHHHHcCCCc-chhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHc
Confidence            99999999999999984 654          4569999999999999999999996 56652                  


Q ss_pred             CCCCHH-HHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc-CCCCCCCCCCCCCCCCCCCChhh
Q 037827          131 LDGSDD-VAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ-WIPVQEEYNPHAHAHSENVDGDL  208 (263)
Q Consensus       131 ~~~~~~-va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~-~~~v~~~~~~~~~~~~~~~~~~~  208 (263)
                      ..+..+ ++..|++. +..++.+|.+|.||||+|++.       ++.++++.|+.. +++++..+..+.++.+.++..  
T Consensus       214 ~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~-------~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~--  283 (337)
T 4g8k_A          214 DDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEK-------KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL--  283 (337)
T ss_dssp             CTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHT-------TCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT--
T ss_pred             CcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHh-------hhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc--
Confidence            233333 44555554 566789999999999999997       678999999874 788888776555444333222  


Q ss_pred             hhhhccccccccchhhhHHHHhhhccccccCCccceec
Q 037827          209 EKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLTLAT  246 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (263)
                                 ...++..+||..|||. +.+|||+.|.
T Consensus       284 -----------g~~~iv~~Ll~~GAd~-n~~~~L~~A~  309 (337)
T 4g8k_A          284 -----------KLKKIAELLCKRGAST-DCGDLVMTAR  309 (337)
T ss_dssp             -----------TCHHHHHHHHTTSCSS-TTCCHHHHHH
T ss_pred             -----------CCHHHHHHHHHCCCCC-CCCCHHHHHH
Confidence                       2266778899999998 4568999995

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.89  E-value=9.2e-24  Score=191.79  Aligned_cols=181  Identities=12%  Similarity=-0.052  Sum_probs=148.0

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHc----CCCCCCC-----
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRY----EADLPNV-----   99 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~----ga~l~~~-----   99 (263)
                      ..+..|+||||.|+..|+.++|+.|++. .. ..+   ...|....++|+..|+.+++++|+++    |+++ +.     
T Consensus        48 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~-~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~  121 (364)
T 3ljn_A           48 IQNRFGCTALHLACKFGCVDTAKYLASV-GE-VHS---LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNEC  121 (364)
T ss_dssp             CCCTTCCCHHHHHHHHCCHHHHHHHHHH-CC-CCC---CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCC
T ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHC-CC-Ccc---ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhc
Confidence            5678899999999999999999999998 22 222   22567788899999999999999999    8874 76     


Q ss_pred             ------------CCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCc--
Q 037827          100 ------------RDEENLLPIHRAAKQG--QRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKL--  148 (263)
Q Consensus       100 ------------~d~~G~TPLh~Aa~~g--~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~--  148 (263)
                                  +|..|+||||+|+..|  +.++|++|++.|+++               ..++.+++..|+..+...  
T Consensus       122 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~  201 (364)
T 3ljn_A          122 DEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS  201 (364)
T ss_dssp             CCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS
T ss_pred             chHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Confidence                        8999999999999999  999999999999872               678899999999986542  


Q ss_pred             --cccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827          149 --AWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY  226 (263)
Q Consensus       149 --~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                        ++.+|..|.||||+|+.+       ++.++++.|+..|++++..+..+.++.+.++.             ....++..
T Consensus       202 ~~~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~-------------~g~~~~v~  261 (364)
T 3ljn_A          202 LRLDYANKQGNSHLHWAILI-------NWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVR-------------AAMVLLTK  261 (364)
T ss_dssp             CCTTCCCTTCCCTTHHHHTT-------TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH-------------TCCHHHHH
T ss_pred             ccccccCCCCCcHHHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-------------hChHHHHH
Confidence              678899999999999987       78899999999999998876555444332222             22366777


Q ss_pred             HHHhhhccc
Q 037827          227 LLLHWFVSF  235 (263)
Q Consensus       227 ~~~~~~~~~  235 (263)
                      +|+..++++
T Consensus       262 ~Ll~~~~~~  270 (364)
T 3ljn_A          262 ELLQKTDVF  270 (364)
T ss_dssp             HHHHHSCHH
T ss_pred             HHHHcCCch
Confidence            888887764

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.89  E-value=1.3e-22  Score=163.08  Aligned_cols=145  Identities=14%  Similarity=0.033  Sum_probs=124.9

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      ....+|||.|+..|+.++++.|++.  +..++.. +..|....++|+. |+.+++++|+++|+++ +.+|..|+||||+|
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~Ll~~--~~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A   77 (162)
T 1ihb_A            3 EPWGNELASAAARGDLEQLTSLLQN--NVNVNAQ-NGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDA   77 (162)
T ss_dssp             --CHHHHHHHHHHTCHHHHHHHTTS--CCCTTCC-CTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred             chHhhHHHHHHHcCCHHHHHHHHhC--CCCcccc-CccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence            3467999999999999999999987  3344443 5566777788988 9999999999999995 99999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcch
Q 037827          112 AKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRL  176 (263)
Q Consensus       112 a~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~  176 (263)
                      +..|+.+++++|+++++++               ..++.+++..|++.++..++.+|..|.||||+|+++       ++.
T Consensus        78 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~-------~~~  150 (162)
T 1ihb_A           78 ARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY-------GRN  150 (162)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT-------TCH
T ss_pred             HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHc-------CCH
Confidence            9999999999999999862               578899999999998776788999999999999997       678


Q ss_pred             HHHHHHcccCCC
Q 037827          177 GYWKGLLYQWIP  188 (263)
Q Consensus       177 ~~~~~li~~~~~  188 (263)
                      ++++.|+..|++
T Consensus       151 ~~~~~Ll~~GAd  162 (162)
T 1ihb_A          151 EVVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHHTC--
T ss_pred             HHHHHHHHhCCC
Confidence            999999998864

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.89  E-value=8e-23  Score=180.32  Aligned_cols=145  Identities=13%  Similarity=0.042  Sum_probs=87.2

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      .|.+|+||||+|+..|+.++|+.|++.  +..+... +..|.+..++|+..|+.+++++|+++|+++ +.+|..|+||||
T Consensus        82 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~--~a~~~~~-~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~  157 (269)
T 4b93_B           82 TSQDGSSPLHVAALHGRADLIPLLLKH--GANAGAR-NADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLI  157 (269)
T ss_dssp             CCTTSCCHHHHHHHTTCTTHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHH
T ss_pred             cCCCCCCHHHHHHHcCcHHHHHHHHhc--CCCcCcc-CCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence            344455555555555555555555543  1222222 223344444555555555555555555552 555555555555


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCC
Q 037827          110 RAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPV  189 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v  189 (263)
                      +||..|+.++|++|                  ++. +..++.+|..|.||||+|+++       ++.++++.|+..|+++
T Consensus       158 ~A~~~g~~~~v~~L------------------l~~-gadvn~~~~~g~t~Lh~A~~~-------g~~~~v~~Ll~~Gad~  211 (269)
T 4b93_B          158 YACSGGHHELVALL------------------LQH-GASINASNNKGNTALHEAVIE-------KHVFVVELLLLHGASV  211 (269)
T ss_dssp             HHHHTTCGGGHHHH------------------HHT-TCCTTCBCTTSCBHHHHHHHT-------TCHHHHHHHHHTTCCS
T ss_pred             HHHHCCCHHHHHHH------------------HHC-CCCCCccccCCCcHHHHHHHc-------CCHHHHHHHHHCCCCC
Confidence            55555555555555                  554 344688899999999999997       7789999999999999


Q ss_pred             CCCCCCCCCCCCCCC
Q 037827          190 QEEYNPHAHAHSENV  204 (263)
Q Consensus       190 ~~~~~~~~~~~~~~~  204 (263)
                      +..+..+.+|.+.++
T Consensus       212 ~~~d~~G~TpL~~A~  226 (269)
T 4b93_B          212 QVLNKRQRTAVDCAE  226 (269)
T ss_dssp             CCCCTTSCCSGGGSC
T ss_pred             CCcCCCCCCHHHHHH
Confidence            998877766666554

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.88  E-value=4.8e-22  Score=175.79  Aligned_cols=178  Identities=14%  Similarity=0.064  Sum_probs=146.3

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+.+|+||||.|+..|+.++|+.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +..+ .|+|||
T Consensus        87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~g~t~L  161 (285)
T 3d9h_A           87 IITADHVSPLHEACLGGHLSCVKILLKH--GAQVNGV-TADWHTPLFNACVSGSWDCVNLLLQHGASV-QPES-DLASPI  161 (285)
T ss_dssp             EECTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SCSC-TTSCHH
T ss_pred             CcCCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-CCCC-CCCCHH
Confidence            4677899999999999999999999987  3444444 556778889999999999999999999995 7544 599999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+|+..|+.+++++|++.++++               ..++.+++..|++.+.. ++ .|..|.||||+|++.       
T Consensus       162 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~-------  232 (285)
T 3d9h_A          162 HEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRT-------  232 (285)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHT-------
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHc-------
Confidence            9999999999999999999862               67889999999988554 44 489999999999997       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhh-hccc
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHW-FVSF  235 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  235 (263)
                      ++.++++.|+..|++++..+..+.++.+.++.               ..++..+|+.+ ++++
T Consensus       233 ~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~---------------~~~~~~~Ll~~~~a~l  280 (285)
T 3d9h_A          233 ASEELACLLMDFGADTQAKNAEGKRPVELVPP---------------ESPLAQLFLEREGASL  280 (285)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT---------------TSHHHHHHHHHC----
T ss_pred             CCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC---------------ccHHHHHHHHhhccCC
Confidence            67899999999999999988777766666551               14567777777 7776

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.88  E-value=1.5e-23  Score=181.17  Aligned_cols=189  Identities=14%  Similarity=-0.021  Sum_probs=137.1

Q ss_pred             cChHHHHHHHHcCCHHHH----HHHHhccCCCcccc---cccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCCCCC---
Q 037827           33 ANYKQVTRYLLEDDWKGL----EDYIMSKTPNALAC---IIVDQSSIFEFIVAST---GKLELISTLIRYEADLPNV---   99 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v----~~Ll~~~~~~~~~~---~i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l~~~---   99 (263)
                      .|+||||.|+..|+.+.|    ++|++.  +..++.   ..+..|....++||..   |+.+++++|+++|+++ +.   
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~-~~~~~   77 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDS-GNPKP   77 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHT-TCSSC
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHc--CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcc-cchhh
Confidence            478999999999999855    555555  344444   2356678888999999   9999999999999884 53   


Q ss_pred             --------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC--CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCC
Q 037827          100 --------RDEENLLPIHRAAKQGQRNVVCYLLEKTRAP--LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKA  169 (263)
Q Consensus       100 --------~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p--~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~  169 (263)
                              +|..|+||||+|+..|+.++|++|+++|+++  ......        .+......|..|.||||+|++.   
T Consensus        78 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~--------~~~~~~~~~~~g~tpL~~A~~~---  146 (256)
T 2etb_A           78 LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRF--------FQKHQGTCFYFGELPLSLAACT---  146 (256)
T ss_dssp             GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG--------GSCCSSSCCCSCSSHHHHHHHT---
T ss_pred             hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccc--------ccccccccccCCCCHHHHHHHc---
Confidence                    3478999999999999999999998877763  110000        0111223345599999999997   


Q ss_pred             CcCCcchHHHHHHcc---cCCCCCCCCCCCCCCCCCCCC---hhhhhhhccccccccchhhhHHHHhhhccc--------
Q 037827          170 FASGIRLGYWKGLLY---QWIPVQEEYNPHAHAHSENVD---GDLEKQLSETSHSAFGFELAYLLLHWFVSF--------  235 (263)
Q Consensus       170 f~s~~~~~~~~~li~---~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  235 (263)
                          ++.++++.|+.   .|++++..+..+.++.|.++.   ...+..-       .-.++..+|+..|+++        
T Consensus       147 ----~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~-------~~~~iv~~Ll~~ga~~~~~~~~~~  215 (256)
T 2etb_A          147 ----KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSA-------LVIHMYDGLLQMGARLCPTVQLEE  215 (256)
T ss_dssp             ----TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH-------HHHHHHHHHHHHHHHHSTTCCGGG
T ss_pred             ----CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhH-------HHHHHHHHHHHcCCCccccccccc
Confidence                78899999999   899999887666655554432   1110000       0023678888888877        


Q ss_pred             ---cccCCccceec
Q 037827          236 ---RVSTTPLTLAT  246 (263)
Q Consensus       236 ---~~~~~~~~~~~  246 (263)
                         +.+.|||++|.
T Consensus       216 ~~d~~g~tpL~~A~  229 (256)
T 2etb_A          216 ISNHQGLTPLKLAA  229 (256)
T ss_dssp             CCCTTSCCHHHHHH
T ss_pred             ccCCCCCCHHHHHH
Confidence               67999999995

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.88  E-value=5.1e-23  Score=182.24  Aligned_cols=150  Identities=12%  Similarity=0.053  Sum_probs=133.3

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCC-CcHHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEEN-LLPIHRA  111 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G-~TPLh~A  111 (263)
                      +|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..| .||||+|
T Consensus        61 ~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A  136 (285)
T 3kea_A           61 ENEFPLHQAATLEDTKIVKILLFS--GLDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHA  136 (285)
T ss_dssp             TTCCHHHHHTTSSSCHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHH
Confidence            589999999999999999999997  3445444 556788889999999999999999999995 9999999 7999999


Q ss_pred             HHcCCHHHHHHHHhCCCCC--------------CCCCHHHHHHHHHhCCCccccccCCCchH-HHHHhcCCCCCcCCcch
Q 037827          112 AKQGQRNVVCYLLEKTRAP--------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKI-LELLSKRPKAFASGIRL  176 (263)
Q Consensus       112 a~~g~~evv~~Ll~~~a~p--------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TP-LHlAA~~~~~f~s~~~~  176 (263)
                      +..|+.+++++|++++++.              ..++.+++..|++. +..++.+|.+|.|| ||+|++.       ++.
T Consensus       137 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~~L~~A~~~-------~~~  208 (285)
T 3kea_A          137 VMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIPDIKLAIDN-------KDI  208 (285)
T ss_dssp             HHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCTTHHHHHHH-------TCH
T ss_pred             HHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCChHHHHHHHc-------CCH
Confidence            9999999999999999862              57889999999988 45578899999998 9999997       678


Q ss_pred             HHHHHHcccCCCCCCCCC
Q 037827          177 GYWKGLLYQWIPVQEEYN  194 (263)
Q Consensus       177 ~~~~~li~~~~~v~~~~~  194 (263)
                      ++++.|+..|++++..+.
T Consensus       209 ~~v~~Ll~~gad~~~~~~  226 (285)
T 3kea_A          209 EMLQALFKYDINIYSANL  226 (285)
T ss_dssp             HHHHHHTTSCBCSTTTTG
T ss_pred             HHHHHHHHcCCCCCCCCh
Confidence            999999999999998863

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.88  E-value=1.5e-22  Score=185.80  Aligned_cols=161  Identities=11%  Similarity=-0.002  Sum_probs=140.2

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC---CCCCCCCCCCC
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE---ADLPNVRDEEN  104 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g---a~l~~~~d~~G  104 (263)
                      ...|..|+||||.|+..|+.++|+.|++.  +..++.. +..|....++|+..|+.+++++|+++|   +++ +.+|..|
T Consensus       160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g  235 (373)
T 2fo1_E          160 NAMDCDENTPLMLAVLARRRRLVAYLMKA--GADPTIY-NKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNG  235 (373)
T ss_dssp             TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTS
T ss_pred             cCCCCCCCCHHHHHHHcChHHHHHHHHHC--CCCCccc-CCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCC
Confidence            35678899999999999999999999997  3444443 556778889999999999999999998   784 9999999


Q ss_pred             CcHHHHHHHcC---CHHHHHHHHhCCCCC-----------------------CCCCHHHHHHHHHhCCCccccccCCCch
Q 037827          105 LLPIHRAAKQG---QRNVVCYLLEKTRAP-----------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGK  158 (263)
Q Consensus       105 ~TPLh~Aa~~g---~~evv~~Ll~~~a~p-----------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~T  158 (263)
                      +||||+|+..|   +.+++++|+++|+++                       ..++.+++..|+..++..++.+|.+|.|
T Consensus       236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~T  315 (373)
T 2fo1_E          236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT  315 (373)
T ss_dssp             CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCC
T ss_pred             CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCC
Confidence            99999999998   899999999988641                       6788999999999887788999999999


Q ss_pred             HHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCC
Q 037827          159 ILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHA  199 (263)
Q Consensus       159 PLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~  199 (263)
                      |||+|+++       ++.++++.|+..|++++..+..+.++
T Consensus       316 pL~~A~~~-------g~~~iv~~Ll~~gad~~~~d~~g~t~  349 (373)
T 2fo1_E          316 PIMLAAQE-------GRIEVVMYLIQQGASVEAVDATDHTA  349 (373)
T ss_dssp             HHHHHHHH-------TCHHHHHHHHHTTCCSSCCCSSSCCH
T ss_pred             HHHHHHHc-------CCHHHHHHHHHcCCCccCCCCCCCCH
Confidence            99999997       78899999999999998886544433

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.88  E-value=1.2e-22  Score=175.84  Aligned_cols=155  Identities=14%  Similarity=0.010  Sum_probs=135.2

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC-CCCCCCCCCCCcHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEA-DLPNVRDEENLLPI  108 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga-~l~~~~d~~G~TPL  108 (263)
                      .+..|+||||.|+..|+.++|+.|++.  +..++.. +..|....++|+..|+.+++++|+++|+ + ++.+|..|+|||
T Consensus        53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~L  128 (253)
T 1yyh_A           53 TDRTGETALHLAARYSRSDAAKRLLEA--SADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATD-LDARMHDGTTPL  128 (253)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHSTTSC-TTCCCTTCCCHH
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCcHH
Confidence            477899999999999999999999997  3444443 5567888899999999999999999998 6 599999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+|+..|+.+++++|++.|+++               ..++.+++..|++.+ ..++.+|.+|.||||+|+++       
T Consensus       129 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~-------  200 (253)
T 1yyh_A          129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAARE-------  200 (253)
T ss_dssp             HHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH-------
T ss_pred             HHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHC-------
Confidence            9999999999999999999862               567889999999874 55788999999999999987       


Q ss_pred             cchHHHHHHcccCCCCCCCCCCC
Q 037827          174 IRLGYWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~~~~~~  196 (263)
                      ++.++++.|+..|++++..+..+
T Consensus       201 ~~~~~v~~Ll~~ga~~~~~d~~g  223 (253)
T 1yyh_A          201 GSYETAKVLLDHFANRDITDHMD  223 (253)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTC
T ss_pred             CCHHHHHHHHHcCCCccccccCC
Confidence            77899999999999988775443

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.88  E-value=8.1e-22  Score=167.72  Aligned_cols=164  Identities=15%  Similarity=0.076  Sum_probs=139.6

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC-CCCCCCCCCCCCcH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE-ADLPNVRDEENLLP  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g-a~l~~~~d~~G~TP  107 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++| .+ ++.+|..|+||
T Consensus        39 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~~g~t~  114 (237)
T 3b7b_A           39 TCSEDQRTPLMEAAENNHLEAVKYLIKA--GALVDPK-DAEGSTCLHLAAKKGHYEVVQYLLSNGQMD-VNCQDDGGWTP  114 (237)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCCCCC-CTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-TTCCCTTSCCH
T ss_pred             ccCCCCCCHHHHHHHhCCHHHHHHHHhC--CCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cccCCCCCCCH
Confidence            4567899999999999999999999987  3444333 555678888999999999999999999 67 59999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      ||+|+..|+.+++++|+++|+++               ..+..+++..|+..+ ..++.+|..|.||||+|+++      
T Consensus       115 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~------  187 (237)
T 3b7b_A          115 MIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK-CDLHAVNIHGDSPLHIAARE------  187 (237)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHT------
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHh------
Confidence            99999999999999999999862               457888888888875 45688899999999999997      


Q ss_pred             CcchHHHHHHcccCCCCCCCCCCCCCCCCCCC
Q 037827          173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENV  204 (263)
Q Consensus       173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~  204 (263)
                       ++.++++.|+..|++++..+..+.++.+.++
T Consensus       188 -~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~  218 (237)
T 3b7b_A          188 -NRYDCVVLFLSRDSDVTLKNKEGETPLQCAS  218 (237)
T ss_dssp             -TCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred             -CCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence             6789999999999999988766655555443

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.88  E-value=2.6e-22  Score=166.44  Aligned_cols=147  Identities=13%  Similarity=0.004  Sum_probs=120.7

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ...|..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||
T Consensus        29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~  104 (192)
T 2rfm_A           29 NYRDSYNRTPLMVACMLGMENAIDKLVEN--FDKLEDK-DIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTP  104 (192)
T ss_dssp             TCCCTTCCCHHHHHHHHTCGGGHHHHHHH--HCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCH
T ss_pred             hCcCCCCCCHHHHHHHcCCHHHHHHHHHh--ccccccc-cccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcH
Confidence            34688899999999999999999999987  3334333 556788889999999999999999999995 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS  172 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s  172 (263)
                      ||+|+..|+.+++++|+++++++               ..++.+++..|++. +..++.+|.+|.||||+|+..      
T Consensus       105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~------  177 (192)
T 2rfm_A          105 LMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIF------  177 (192)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHT------
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHh------
Confidence            99999999999999999888762               45667777777766 344677778888888888776      


Q ss_pred             CcchHHHHHHcccC
Q 037827          173 GIRLGYWKGLLYQW  186 (263)
Q Consensus       173 ~~~~~~~~~li~~~  186 (263)
                       ++.++++.|+..+
T Consensus       178 -~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          178 -GRQEVIKIFTEVR  190 (192)
T ss_dssp             -TCHHHHHHHHHHH
T ss_pred             -CcHHHHHHHHhcc
Confidence             5667777776543

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.88  E-value=2.3e-22  Score=162.93  Aligned_cols=160  Identities=14%  Similarity=0.041  Sum_probs=122.6

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA  112 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa  112 (263)
                      .|.||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~   77 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQ--ENVINHT-DEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLAC   77 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHH--SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHc--CCCcCCC-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHH
Confidence            478999999999999999999987  3445444 556788889999999999999999999995 999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCC
Q 037827          113 KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEE  192 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~  192 (263)
                      ..|+.+++++|+++++                   .++.+|.+|.||||+|+..       ++.++++.|+..|++++..
T Consensus        78 ~~~~~~~v~~Ll~~g~-------------------~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~  131 (167)
T 3v31_A           78 SKGYTDIVKMLLDCGV-------------------DVNEYDWNGGTPLLYAVHG-------NHVKCVKMLLESGADPTIE  131 (167)
T ss_dssp             HHTCHHHHHHHHHHTC-------------------CTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCC
T ss_pred             HcCCHHHHHHHHHCCC-------------------CCCcCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCc
Confidence            9999999999975433                   3456677888888888876       5678888888887777666


Q ss_pred             CCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827          193 YNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF  235 (263)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      +..+.++.+.++             .....++..+|+.+++++
T Consensus       132 ~~~g~t~l~~A~-------------~~~~~~~~~~L~~~~~~~  161 (167)
T 3v31_A          132 TDSGYNSMDLAV-------------ALGYRSVQQVIESHLLKL  161 (167)
T ss_dssp             CTTSCCHHHHHH-------------HHTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHH-------------HcCcHHHHHHHHHHHHHH
Confidence            543333322221             112255666666666665

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.88  E-value=1.1e-22  Score=175.33  Aligned_cols=172  Identities=12%  Similarity=0.000  Sum_probs=106.0

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA  111 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A  111 (263)
                      ..|.||||.|++.|+.+.++.||++  +..++.  +..+....++||..|+.+++++|++.|+++ +.+|..|+||||+|
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~--g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A   77 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAH--GMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA   77 (239)
T ss_dssp             --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred             ccccccCchhhhhhhHHHHHHHhcc--CCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence            4688999999999999999999987  333322  344567777999999999999999999994 99999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCC
Q 037827          112 AKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQE  191 (263)
Q Consensus       112 a~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~  191 (263)
                      +..|+.++|++|++                  . +..++.+|.+|.||||+|+..       ++.++++.|+..|++++.
T Consensus        78 ~~~g~~~~v~~Ll~------------------~-ga~~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~  131 (239)
T 1ycs_B           78 VCAGHTEIVKFLVQ------------------F-GVNVNAADSDGWTPLHCAASC-------NNVQVCKFLVESGAAVFA  131 (239)
T ss_dssp             HHHTCHHHHHHHHH------------------H-TCCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTC
T ss_pred             HHcCCHHHHHHHHH------------------c-CCCCCccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCcce
Confidence            99999999999964                  3 334677888999999999987       678999999999998888


Q ss_pred             CCCCCC-CCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc-------------cccCCcccee
Q 037827          192 EYNPHA-HAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF-------------RVSTTPLTLA  245 (263)
Q Consensus       192 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~  245 (263)
                      .+..+. ++.+.+..           ......++..+|+..+++.             ..++||+++|
T Consensus       132 ~~~~~~~t~l~~a~~-----------~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa  188 (239)
T 1ycs_B          132 MTYSDMQTAADKCEE-----------MEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELP  188 (239)
T ss_dssp             CCSSSCCCHHHHCCS-----------SSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCC
T ss_pred             ecCCCCcchHHHHHH-----------hhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCccc
Confidence            765443 43332210           1112266677788888776             2467888887

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.88  E-value=1.7e-21  Score=158.76  Aligned_cols=145  Identities=15%  Similarity=0.058  Sum_probs=117.7

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      ....+.++|+.|+..|+.++|+.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||
T Consensus        10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~   85 (169)
T 2y1l_E           10 HGSDLGKKLLEAARAGRDDEVRILMAN--GADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLR   85 (169)
T ss_dssp             ---CHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred             CCCcccchHHHHHHcCCHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHH
Confidence            345668999999999999999999997  3444443 556678889999999999999999999995 999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCc
Q 037827          110 RAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGI  174 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~  174 (263)
                      +|+..|+.+++++|+++++++               ..++.+++..|++.+ ..++.+|.+|.||||+|+++       +
T Consensus        86 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~-------~  157 (169)
T 2y1l_E           86 LAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDN-------G  157 (169)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------T
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHh-------C
Confidence            999999999999999988752               456777777777764 34577788888888888876       5


Q ss_pred             chHHHHHHcccC
Q 037827          175 RLGYWKGLLYQW  186 (263)
Q Consensus       175 ~~~~~~~li~~~  186 (263)
                      +.++++.|+..|
T Consensus       158 ~~~~~~~L~~~G  169 (169)
T 2y1l_E          158 NEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcC
Confidence            678888777543

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.87  E-value=2e-21  Score=163.81  Aligned_cols=152  Identities=16%  Similarity=0.074  Sum_probs=131.7

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|+.++++.|++. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        53 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L  129 (223)
T 2f8y_A           53 IQDNMGRTPLHAAVSADAQGVFQILIRN-RATDLDAR-MHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSAL  129 (223)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHB-TTSCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccC-CCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHH
Confidence            4677899999999999999999999998 44444443 556678888999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG  173 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~  173 (263)
                      |+|+..|+.+++++|+++++++               ..++.+++..|++.+. .++.+|..|.||||+|+++       
T Consensus       130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A~~~-------  201 (223)
T 2f8y_A          130 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA-NRDITDHMDRLPRDIAQER-------  201 (223)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHT-------
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC-CCccccccCCCHHHHHHHh-------
Confidence            9999999999999999999862               5678889998988754 5688899999999999997       


Q ss_pred             cchHHHHHHcccCCCCCC
Q 037827          174 IRLGYWKGLLYQWIPVQE  191 (263)
Q Consensus       174 ~~~~~~~~li~~~~~v~~  191 (263)
                      ++.++++.|+..|+....
T Consensus       202 ~~~~i~~~L~~~g~~~~~  219 (223)
T 2f8y_A          202 MHHDIVRLLDEYNLVRSP  219 (223)
T ss_dssp             TCHHHHHHHHHTTCSSCC
T ss_pred             cchHHHHHHHHcCCCccc
Confidence            778999999999875443

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.87  E-value=2.4e-22  Score=161.95  Aligned_cols=140  Identities=11%  Similarity=-0.023  Sum_probs=107.1

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc-H
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL-P  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T-P  107 (263)
                      ..+..+.||||.|+..|+.++|+.|++.  +..++.. +..|....++|+ .|+.+++++|+++|+++ +.+|..|+| |
T Consensus         7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttp   81 (156)
T 1bi7_B            7 SSMEPSADWLATAAARGRVEEVRALLEA--GANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRP   81 (156)
T ss_dssp             ---CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCH
T ss_pred             CCCccchHHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHH
Confidence            3467789999999999999999999987  3444444 445556666774 99999999999999995 999999999 9


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      ||+|+..|+.++|++|++                  . +..++.+|.+|.||||+|+++       ++.++++.|+..|+
T Consensus        82 L~~A~~~~~~~~v~~Ll~------------------~-ga~~~~~d~~g~tpl~~A~~~-------~~~~~v~~Ll~~ga  135 (156)
T 1bi7_B           82 VHDAAREGFLDTLVVLHR------------------A-GARLDVRDAWGRLPVDLAEEL-------GHRDVARYLRAAAG  135 (156)
T ss_dssp             HHHHHHHTCHHHHHHHHH------------------H-TCCSSCCCTTCCCHHHHHHHH-------TCHHHHHHHSSCC-
T ss_pred             HHHHHHCCCHHHHHHHHH------------------c-CCCCcccCCCCCCHHHHHHHh-------CHHHHHHHHHHcCC
Confidence            999999999999999964                  3 334677899999999999987       67899999999999


Q ss_pred             CCCCCCCCCCCC
Q 037827          188 PVQEEYNPHAHA  199 (263)
Q Consensus       188 ~v~~~~~~~~~~  199 (263)
                      +++..+..+..+
T Consensus       136 ~~~~~~~~g~t~  147 (156)
T 1bi7_B          136 GTRGSNHARIDA  147 (156)
T ss_dssp             ------------
T ss_pred             CCCccCcCcCcc
Confidence            999887555433

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.87  E-value=2e-21  Score=155.50  Aligned_cols=138  Identities=17%  Similarity=0.071  Sum_probs=115.8

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAK  113 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~  113 (263)
                      +.+|||.|+..|+.+.++.|++. .+..++.. +..|....++ |..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~   77 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAAR   77 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred             cchHHHHHHHhCCHHHHHHHHHh-hCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence            46899999999999999999987 44455444 5566777788 9999999999999999995 9999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHH
Q 037827          114 QGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGY  178 (263)
Q Consensus       114 ~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~  178 (263)
                      .|+.+++++|+++|+++               ..++.+++..|++.  ..++.+|.+|.||||+|++.       ++.++
T Consensus        78 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~-------~~~~~  148 (156)
T 1bd8_A           78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQR-------GAQDL  148 (156)
T ss_dssp             TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHS-------CCHHH
T ss_pred             cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHc-------CcHHH
Confidence            99999999999988762               45677888888776  45677888899999988887       67788


Q ss_pred             HHHHcc
Q 037827          179 WKGLLY  184 (263)
Q Consensus       179 ~~~li~  184 (263)
                      ++.|+.
T Consensus       149 v~~Ll~  154 (156)
T 1bd8_A          149 VDILQG  154 (156)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            888775

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.87  E-value=5.8e-22  Score=163.67  Aligned_cols=138  Identities=21%  Similarity=0.141  Sum_probs=115.0

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHH
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYG  140 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~  140 (263)
                      .||..|+.++|+.|+++|+++ +.+|.+|+||||+|+..|+.+++++|+..|+++               ..++.+++..
T Consensus        10 ~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~   88 (169)
T 4gpm_A           10 EAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKL   88 (169)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHH
Confidence            799999999999999999995 999999999999999999999999999999872               5788999999


Q ss_pred             HHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhcccccccc
Q 037827          141 LLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAF  220 (263)
Q Consensus       141 Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                      |++.+ ..++.+|.+|.||||+|++.       ++.++++.|+..|++++..+..+.+|.+.++.             ..
T Consensus        89 Ll~~g-advn~~d~~G~TpLh~A~~~-------g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~-------------~g  147 (169)
T 4gpm_A           89 LISKG-ADVNAKDSDGRTPLHHAAEN-------GHKEVVKLLISKGADVNTSDSDGRTPLDLARE-------------HG  147 (169)
T ss_dssp             HHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-------------TT
T ss_pred             HHHCc-CCCCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCccccCCCCCCHHHHHHH-------------cC
Confidence            99875 45789999999999999997       77899999999999998887655544433222             12


Q ss_pred             chhhhHHHHhhhccc
Q 037827          221 GFELAYLLLHWFVSF  235 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~  235 (263)
                      ..++..+|+..||++
T Consensus       148 ~~~iv~~Ll~~GA~i  162 (169)
T 4gpm_A          148 NEEVVKLLEKQGGWL  162 (169)
T ss_dssp             CHHHHHHHHTC----
T ss_pred             CHHHHHHHHHCCCCc
Confidence            267788899999987

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.87  E-value=2.9e-22  Score=157.89  Aligned_cols=130  Identities=11%  Similarity=-0.031  Sum_probs=112.0

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCC-CCc
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEE-NLL  106 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~-G~T  106 (263)
                      ...+..+.||||.|+..|+.++++.|++.  +..++.. +..|....++|+. |+.+++++|+++|+++ +.+|.. |+|
T Consensus         6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t   80 (136)
T 1d9s_A            6 HMLGGSSDAGLATAAARGQVETVRQLLEA--GADPNAL-NRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTR   80 (136)
T ss_dssp             SCCCCCCSCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBC
T ss_pred             cCCCCCCccHHHHHHHcCCHHHHHHHHHc--CCCcCCc-CCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCC
Confidence            35678899999999999999999999987  3444444 5566777789999 9999999999999995 999999 999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~  186 (263)
                      |||+|+..|+.+++++|++++                   ..++.+|.+|.||||+|+++       ++.++++.|+..|
T Consensus        81 ~L~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~d~~g~tpl~~A~~~-------~~~~~~~~Ll~~G  134 (136)
T 1d9s_A           81 PVHDAAREGFLDTLVVLHRAG-------------------ARLDVCDAWGRLPVDLAEEQ-------GHRDIARYLHAAT  134 (136)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTC-------------------CCCCCCSSSSSCHHHHHHHH-------TCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcC-------------------CCCCccCCCCCCHHHHHHHc-------CCHHHHHHHHHcC
Confidence            999999999999999996543                   34677899999999999987       6789999999887


Q ss_pred             CC
Q 037827          187 IP  188 (263)
Q Consensus       187 ~~  188 (263)
                      ++
T Consensus       135 ad  136 (136)
T 1d9s_A          135 GD  136 (136)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.87  E-value=1.7e-21  Score=153.38  Aligned_cols=128  Identities=14%  Similarity=0.056  Sum_probs=108.5

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      .....+.||||.|+..|+.++++.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|||
T Consensus         9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L   84 (136)
T 2jab_A            9 HHGSDLGKKLLEAARAGQDDEVRILMAN--GADVNAK-DEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPL   84 (136)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred             cccccccHHHHHHHHhCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHH
Confidence            4556789999999999999999999997  3444444 556788889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~  186 (263)
                      |+|+..|+.++|++|+++|                   ..++.+|.+|.||||+|++.       ++.++++.|+..|
T Consensus        85 ~~A~~~~~~~~v~~Ll~~g-------------------~~~~~~~~~g~tpl~~A~~~-------~~~~~~~~Ll~~G  136 (136)
T 2jab_A           85 HLAAFIGHLEIAEVLLKHG-------------------ADVNAQDKFGKTAFDISIGN-------GNEDLAEILQKLN  136 (136)
T ss_dssp             HHHHHHTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHC-
T ss_pred             HHHHHcCCHHHHHHHHHcC-------------------CCCcCcCCCCCCHHHHHHHC-------CCHHHHHHHHHcC
Confidence            9999999999999996433                   34577899999999999997       6789999988654

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.86  E-value=9.3e-23  Score=178.10  Aligned_cols=198  Identities=12%  Similarity=0.066  Sum_probs=123.6

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhcc--CCCcccc---cccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCC----
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSK--TPNALAC---IIVDQSSIFEFIVAST---GKLELISTLIRYEADL----   96 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~--~~~~~~~---~i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l----   96 (263)
                      ..+..|+||||.|+..|+.++|+.|++..  .+..++.   ..+..|....++||..   |+.++|++|+++|++.    
T Consensus         8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~   87 (273)
T 2pnn_A            8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK   87 (273)
T ss_dssp             ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH
T ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh
Confidence            45677788888888888888777777620  1222211   1244556777777765   8888888888876541    


Q ss_pred             --CC----CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------------------------CCCCHHHHHHH
Q 037827           97 --PN----VRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP-----------------------------LDGSDDVAYGL  141 (263)
Q Consensus        97 --~~----~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p-----------------------------~~~~~~va~~L  141 (263)
                        ++    .+|..|+||||+|+..|+.++|++|+++|+++                             ..++.+++..|
T Consensus        88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L  167 (273)
T 2pnn_A           88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL  167 (273)
T ss_dssp             HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred             HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence              02    25667888888888888888888888877652                             23456777777


Q ss_pred             HHh--CCCccccccCCCchHHHHHhcCCCCCcCC--cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccc
Q 037827          142 LRK--HPKLAWAEIAGTGKILELLSKRPKAFASG--IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSH  217 (263)
Q Consensus       142 l~~--~~~~~~~~D~~G~TPLHlAA~~~~~f~s~--~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                      ++.  .+..++.+|.+|.||||+|++.++.....  ...++++.|+..|++++......        +-.+..+.+.+.+
T Consensus       168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~--------~~~d~~g~TpL~~  239 (273)
T 2pnn_A          168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE--------EITNRKGLTPLAL  239 (273)
T ss_dssp             HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG--------GCCCTTSCCHHHH
T ss_pred             HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc--------cccCCCCCCHHHH
Confidence            773  45667889999999999999864210000  01689999999999887521100        0001111222223


Q ss_pred             ccc--chhhhHHHHhhhcc
Q 037827          218 SAF--GFELAYLLLHWFVS  234 (263)
Q Consensus       218 ~~~--~~~~~~~~~~~~~~  234 (263)
                      ++.  ..++..+|+..||.
T Consensus       240 A~~~g~~~iv~~Ll~~ga~  258 (273)
T 2pnn_A          240 AASSGKIGVLAYILQREIH  258 (273)
T ss_dssp             HHHTTCHHHHHHHHHHHTC
T ss_pred             HHHhChHHHHHHHHHCCCC
Confidence            333  36677788888884

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.86  E-value=1.8e-22  Score=174.62  Aligned_cols=198  Identities=14%  Similarity=0.026  Sum_probs=138.4

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHh----ccCCCcccccc---cCCcCHHHHHHH---hCCcHHHHHHHHHcCCCC----
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIM----SKTPNALACII---VDQSSIFEFIVA---STGKLELISTLIRYEADL----   96 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~----~~~~~~~~~~i---~~~g~iv~~~AA---~~G~~eiv~~Ll~~ga~l----   96 (263)
                      +..++++||.|++.|+.+.++.|++    .  +..++...   +..|....++|+   ..|+.+++++|++.|++.    
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~   79 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR   79 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence            4568999999999999997666666    4  33333321   245788888998   779999999999988531    


Q ss_pred             ------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCC
Q 037827           97 ------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAF  170 (263)
Q Consensus        97 ------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f  170 (263)
                            .+.+|..|+||||+|+..|+.++|++|+++|+++......   .+.  .+......+.+|.||||+|++.    
T Consensus        80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~---~~~--~~~~~~~~~~~g~tpL~~A~~~----  150 (260)
T 3jxi_A           80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG---RFF--QPKDEGGYFYFGELPLSLAACT----  150 (260)
T ss_dssp             HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEE---CCC--SSSCCCCSCCSCSSHHHHHHHT----
T ss_pred             hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccc---ccc--CcccccccccCCCCHHHHHHHc----
Confidence                  2555669999999999999999999998877652000000   000  0011122336899999999997    


Q ss_pred             cCCcchHHHHHHcc---cCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc-----------c
Q 037827          171 ASGIRLGYWKGLLY---QWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF-----------R  236 (263)
Q Consensus       171 ~s~~~~~~~~~li~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~  236 (263)
                         ++.++++.|+.   .|++++..+..+.++.|.++.-...    ......+..++..+|+..|+++           +
T Consensus       151 ---g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~----~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~  223 (260)
T 3jxi_A          151 ---NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADN----TRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN  223 (260)
T ss_dssp             ---TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCS----SHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred             ---CCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccC----chhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence               67899999999   8999998887666666554410000    0000001146777899998875           6


Q ss_pred             ccCCccceec
Q 037827          237 VSTTPLTLAT  246 (263)
Q Consensus       237 ~~~~~~~~~~  246 (263)
                      .+.|||++|.
T Consensus       224 ~g~tpL~~A~  233 (260)
T 3jxi_A          224 DGLSPLMMAA  233 (260)
T ss_dssp             TSCCHHHHHH
T ss_pred             CCCCHHHHHH
Confidence            8999999995

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.86  E-value=1.1e-21  Score=165.83  Aligned_cols=182  Identities=18%  Similarity=0.057  Sum_probs=139.3

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|.||||.|+..|+.++++.|++. .+ .+....+..+....++|+..|+.+++++|++.|+++ +.+|..|+|||
T Consensus        37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l  113 (240)
T 3eu9_A           37 QPDKENVTLLHWAAINNRIDLVKYYISK-GA-IVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCI  113 (240)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC-CTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             CCCCCCCCHHHHHHHhCCHHHHHHHHHc-CC-cchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHH
Confidence            4567899999999999999999999998 33 333332444677888999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccC-CCchHHHHHhcCCCCCc
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIA-GTGKILELLSKRPKAFA  171 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~-~G~TPLHlAA~~~~~f~  171 (263)
                      |+|+..|+.+++++|+++++++                .....+++..|+.. +..++..+. .|.||||+|+++     
T Consensus       114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~-~~~~~~~~~~~g~t~L~~A~~~-----  187 (240)
T 3eu9_A          114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF-NVSVNLGDKYHKNTALHWAVLA-----  187 (240)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT-TCCTTCCCTTTCCCHHHHHHHH-----
T ss_pred             HHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc-CCCcchhhccCCCcHHHHHHHc-----
Confidence            9999999999999999999862                12224455555555 444566675 999999999997     


Q ss_pred             CCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhcc
Q 037827          172 SGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVS  234 (263)
Q Consensus       172 s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                        ++.++++.|+..|++++..+..+.++.+.++.             ....++..+|+..+++
T Consensus       188 --~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~-------------~~~~~~v~~L~~~~~~  235 (240)
T 3eu9_A          188 --GNTTVISLLLEAGANVDAQNIKGESALDLAKQ-------------RKNVWMINHLQEARQA  235 (240)
T ss_dssp             --TCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHH-------------TTCHHHHHHHHHHC--
T ss_pred             --CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-------------cCcHHHHHHHHHhhhc
Confidence              67899999999999988776544433322222             2225566666666654

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.86  E-value=1.5e-21  Score=171.66  Aligned_cols=166  Identities=11%  Similarity=0.044  Sum_probs=141.6

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|+.++|+.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l  143 (299)
T 1s70_B           68 YANVDGLTALHQACIDDNVDMVKFLVEN--GANINQP-DNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPL  143 (299)
T ss_dssp             CBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHH
Confidence            4577899999999999999999999997  3445444 556788889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCC-C------------------------------------CC-----CCCCHHHHHHHHHhCC
Q 037827          109 HRAAKQGQRNVVCYLLEKT-R------------------------------------AP-----LDGSDDVAYGLLRKHP  146 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~-a------------------------------------~p-----~~~~~~va~~Ll~~~~  146 (263)
                      |+|+..|+.+++++|+... .                                    .|     ..++.+++..|+..+ 
T Consensus       144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-  222 (299)
T 1s70_B          144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-  222 (299)
T ss_dssp             HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-
T ss_pred             HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-
Confidence            9999999999999877531 1                                    11     567889999998764 


Q ss_pred             CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCCh
Q 037827          147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDG  206 (263)
Q Consensus       147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~  206 (263)
                      ..++.+|.+|.||||+|+++       ++.++++.|+..|++++..+..+.++.+.++.+
T Consensus       223 ~d~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~  275 (299)
T 1s70_B          223 YDVNIKDYDGWTPLHAAAHW-------GKEEACRILVENLCDMEAVNKVGQTAFDVADED  275 (299)
T ss_dssp             CCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred             CCCCCcCCCCCcHHHHHHhc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence            55788999999999999998       778999999999999999988787777777553

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.86  E-value=1.9e-22  Score=174.28  Aligned_cols=171  Identities=17%  Similarity=0.088  Sum_probs=129.6

Q ss_pred             hcccChHHHHHHHHc---CCHHHHHHHHhcc-CCCccc----cc---ccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCC
Q 037827           30 KDIANYKQVTRYLLE---DDWKGLEDYIMSK-TPNALA----CI---IVDQSSIFEFIVASTGKLELISTLIRYEADLPN   98 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~---G~~e~v~~Ll~~~-~~~~~~----~~---i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~   98 (263)
                      .+..|+||||.|+..   |+.++++.|++.+ ++....    ..   .+..|....++||..|+.+++++|+++|+++ +
T Consensus        39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~  117 (256)
T 2etb_A           39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-H  117 (256)
T ss_dssp             BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred             CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-C
Confidence            688999999999999   9999999999862 111111    10   1234678889999999999999999999995 9


Q ss_pred             CCCCC-------------CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827           99 VRDEE-------------NLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK  165 (263)
Q Consensus        99 ~~d~~-------------G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~  165 (263)
                      .+|..             |+||||+|+..|+.++|++|++.+                ..+..++.+|.+|.||||+|++
T Consensus       118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~----------------~~ga~~n~~d~~g~TpLh~A~~  181 (256)
T 2etb_A          118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP----------------HQPASLEATDSLGNTVLHALVM  181 (256)
T ss_dssp             CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS----------------SCCCCTTCCCTTSCCHHHHHHH
T ss_pred             cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc----------------ccCCCcCccCCCCCCHHHHHHH
Confidence            99987             999999999999999999996410                0344577889999999999998


Q ss_pred             CCCCCcCCcchH-------HHHHHcccCCCC-------CCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhh
Q 037827          166 RPKAFASGIRLG-------YWKGLLYQWIPV-------QEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHW  231 (263)
Q Consensus       166 ~~~~f~s~~~~~-------~~~~li~~~~~v-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      .+.     ++.+       +++.|+..|+++       +..+..+.++.+.+             ......++..+|+.+
T Consensus       182 ~~~-----~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A-------------~~~g~~~~v~~Ll~~  243 (256)
T 2etb_A          182 IAD-----NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLA-------------AKEGKIEIFRHILQR  243 (256)
T ss_dssp             HCC-----SCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHH
T ss_pred             ccc-----CCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHH-------------HHhCCHHHHHHHHhC
Confidence            321     4556       999999999988       44443333333222             222236778888888


Q ss_pred             hccc
Q 037827          232 FVSF  235 (263)
Q Consensus       232 ~~~~  235 (263)
                      |++.
T Consensus       244 g~~~  247 (256)
T 2etb_A          244 EFSG  247 (256)
T ss_dssp             HHHH
T ss_pred             CCCC
Confidence            8887

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.86  E-value=2.3e-21  Score=165.48  Aligned_cols=151  Identities=10%  Similarity=-0.073  Sum_probs=129.8

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCC-----CCCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEAD-----LPNVRDEE  103 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~-----l~~~~d~~  103 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|++     .++..|..
T Consensus        40 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~  116 (236)
T 1ikn_D           40 FQNNLQQTPLHLAVITNQPEIAEALLGA--GCDPELR-DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN  116 (236)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCC-CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence            4677899999999999999999999987  3444443 55678888999999999999999999875     13778899


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCC
Q 037827          104 NLLPIHRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRP  167 (263)
Q Consensus       104 G~TPLh~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~  167 (263)
                      |+||||+|+..|+.++|++|+++|+++                ..++.+++..|++. +..++.+|..|.||||+|+.+ 
T Consensus       117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~-  194 (236)
T 1ikn_D          117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQLTWGR-  194 (236)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTTS-
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHHHHcc-
Confidence            999999999999999999999999862                45778888888887 555788999999999999987 


Q ss_pred             CCCcCCcchHHHHHHcccCCCCC
Q 037827          168 KAFASGIRLGYWKGLLYQWIPVQ  190 (263)
Q Consensus       168 ~~f~s~~~~~~~~~li~~~~~v~  190 (263)
                            ++.++++.|+..|++..
T Consensus       195 ------~~~~~~~~Ll~~ga~~~  211 (236)
T 1ikn_D          195 ------PSTRIQQQLGQLTLENL  211 (236)
T ss_dssp             ------SCHHHHHHHHTTSCGGG
T ss_pred             ------CchHHHHHHHHcchhhh
Confidence                  77899999999998665

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.86  E-value=6.4e-21  Score=152.63  Aligned_cols=136  Identities=13%  Similarity=0.063  Sum_probs=116.2

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAK  113 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~  113 (263)
                      ..++|+.|+..|+.+.++.|++. .. ...  .+..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~-~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~   76 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMAN-GA-PFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAAS   76 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHH-TC-CCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHH
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHc-CC-CCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence            46899999999999999999987 33 222  2455678888999999999999999999995 9999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHH
Q 037827          114 QGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGY  178 (263)
Q Consensus       114 ~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~  178 (263)
                      .|+.++|++|+++|+++               ..++.+++..|++.+ ..++.+|.+|.||||+|+++       ++.++
T Consensus        77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~-------~~~~i  148 (153)
T 1awc_B           77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDN-------GNEDL  148 (153)
T ss_dssp             HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHH
T ss_pred             cChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHc-------CCHHH
Confidence            99999999999998862               567889999998874 55788999999999999997       67788


Q ss_pred             HHHH
Q 037827          179 WKGL  182 (263)
Q Consensus       179 ~~~l  182 (263)
                      ++.|
T Consensus       149 ~~~L  152 (153)
T 1awc_B          149 AEIL  152 (153)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8765

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.85  E-value=6.1e-21  Score=146.14  Aligned_cols=126  Identities=21%  Similarity=0.163  Sum_probs=109.2

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA  112 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa  112 (263)
                      +|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~   76 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA   76 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHc--CCCCCCc-CCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHH
Confidence            588999999999999999999997  2333333 556677888999999999999999999995 999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          113 KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      ..|+.+++++|++++                   ..++.+|.+|.||||+|++.       ++.++++.|+..|++
T Consensus        77 ~~~~~~~~~~Ll~~g-------------------~~~~~~~~~g~t~l~~A~~~-------~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           77 RNGHLEVVKLLLEAG-------------------ADVNAKDKNGRTPLHLAARN-------GHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HTTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHTCC
T ss_pred             HcChHHHHHHHHHcC-------------------CCCcccCCCCCCHHHHHHHc-------CcHHHHHHHHHcCCC
Confidence            999999999996543                   33567889999999999997       778999999988864

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.85  E-value=6.6e-21  Score=158.11  Aligned_cols=146  Identities=13%  Similarity=0.021  Sum_probs=123.3

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHH-HcCCCCCCCCCCCCCcH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLI-RYEADLPNVRDEENLLP  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll-~~ga~l~~~~d~~G~TP  107 (263)
                      ..+.+|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+ ..+++ ++.+|..|+||
T Consensus        34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~~g~t~  109 (201)
T 3hra_A           34 EVDTEGNTPLNIAVHNNDIEIAKALIDR--GADINLQ-NSISDSPYLYAGAQGRTEILAYMLKHATPD-LNKHNRYGGNA  109 (201)
T ss_dssp             CCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCCC-TTCCCTTSCCS
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhccCcc-cccccCCCCcH
Confidence            4567899999999999999999999997  3444443 556678888999999999999999 55667 59999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCC-CCC---------------CCCC-----HHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKT-RAP---------------LDGS-----DDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~-a~p---------------~~~~-----~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      ||+|+..|+.+++++|++++ +++               ..+.     .+++..|++.+ ..++.+|.+|.||||+|+++
T Consensus       110 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~  188 (201)
T 3hra_A          110 LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQK  188 (201)
T ss_dssp             HHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHc
Confidence            99999999999999999998 441               2233     78888888874 55788999999999999997


Q ss_pred             CCCCcCCcchHHHHHHcccC
Q 037827          167 PKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       167 ~~~f~s~~~~~~~~~li~~~  186 (263)
                             ++.++++.|+..|
T Consensus       189 -------~~~~~~~~Ll~~G  201 (201)
T 3hra_A          189 -------GYTEISKILAQYN  201 (201)
T ss_dssp             -------TCHHHHHHHHTCC
T ss_pred             -------CCHhHHHHHHhcC
Confidence                   7789999998765

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.85  E-value=2.9e-21  Score=157.12  Aligned_cols=136  Identities=10%  Similarity=0.013  Sum_probs=116.5

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ...+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||
T Consensus        30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~  105 (172)
T 3v30_A           30 NKPDERGFTPLIWASAFGEIETVRFLLEW--GADPHIL-AKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTP  105 (172)
T ss_dssp             GCCCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCH
T ss_pred             cCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCchhh-cccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence            34577899999999999999999999987  3444433 556678888999999999999999999995 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      ||+|+..|+.++|++|+++|                   ..++.+|.+|.||||+|++.       ++.++++.|+..++
T Consensus       106 L~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~~~~g~t~l~~A~~~-------~~~~~~~~L~~~~~  159 (172)
T 3v30_A          106 LLYAVRGNHVKCVEALLARG-------------------ADLTTEADSGYTPMDLAVAL-------GYRKVQQVIENHIL  159 (172)
T ss_dssp             HHHHHHTTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcC-------------------CCccccCCCCCCHHHHHHHh-------CcHHHHHHHHHHHH
Confidence            99999999999999996433                   34577899999999999997       67899999999987


Q ss_pred             CCCCCC
Q 037827          188 PVQEEY  193 (263)
Q Consensus       188 ~v~~~~  193 (263)
                      ++...+
T Consensus       160 ~~~~~~  165 (172)
T 3v30_A          160 KLFQSN  165 (172)
T ss_dssp             HHSCC-
T ss_pred             HHhccc
Confidence            766554

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.85  E-value=1.8e-21  Score=169.91  Aligned_cols=156  Identities=14%  Similarity=0.081  Sum_probs=122.0

Q ss_pred             hhcccChHHHHHHHHc---CCHHHHHHHHhcc-CCCc----cccc---ccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCC
Q 037827           29 IKDIANYKQVTRYLLE---DDWKGLEDYIMSK-TPNA----LACI---IVDQSSIFEFIVASTGKLELISTLIRYEADLP   97 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~---G~~e~v~~Ll~~~-~~~~----~~~~---i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~   97 (263)
                      ..+..|+||||.|+..   |+.++|+.|++.+ ++..    ++..   .+..|....++||..|+.++|++|+++|+++ 
T Consensus        49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-  127 (273)
T 2pnn_A           49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-  127 (273)
T ss_dssp             SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred             ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-
Confidence            3477899999999986   9999999999872 1111    2221   1335688889999999999999999999995 


Q ss_pred             CCCCC--------------CCCcHHHHHHHcCCHHHHHHHHh---CCCCC---------------CCCC---------HH
Q 037827           98 NVRDE--------------ENLLPIHRAAKQGQRNVVCYLLE---KTRAP---------------LDGS---------DD  136 (263)
Q Consensus        98 ~~~d~--------------~G~TPLh~Aa~~g~~evv~~Ll~---~~a~p---------------~~~~---------~~  136 (263)
                      +.+|.              .|+||||+|+..|+.++|++|++   .|+++               ..+.         .+
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~  207 (273)
T 2pnn_A          128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTS  207 (273)
T ss_dssp             TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHH
T ss_pred             CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHH
Confidence            99987              79999999999999999999999   78762               2223         56


Q ss_pred             HHHHHHHhCCCcc------ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC-CCCCC
Q 037827          137 VAYGLLRKHPKLA------WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI-PVQEE  192 (263)
Q Consensus       137 va~~Ll~~~~~~~------~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~-~v~~~  192 (263)
                      ++..|+..+.+..      +.+|.+|.||||+|+++       ++.++++.|+..|+ +....
T Consensus       208 ~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~-------g~~~iv~~Ll~~ga~dp~~~  263 (273)
T 2pnn_A          208 MYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS-------GKIGVLAYILQREIHEPECR  263 (273)
T ss_dssp             HHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHHTC-----
T ss_pred             HHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh-------ChHHHHHHHHHCCCCCchhh
Confidence            7777877743321      35899999999999998       78899999999998 44443

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.84  E-value=4.5e-21  Score=169.12  Aligned_cols=149  Identities=13%  Similarity=-0.002  Sum_probs=121.4

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHH-----hCCcHHHHHHHHHcCCCCCCCCCC
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVA-----STGKLELISTLIRYEADLPNVRDE  102 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA-----~~G~~eiv~~Ll~~ga~l~~~~d~  102 (263)
                      ...|.+|+||||+|+..|+.++|+.|++. ....++.. +..|....++|+     ..|+.+++++|++.|.+. +..|.
T Consensus       105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~-~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~  181 (276)
T 4hbd_A          105 NIADSNGNTALHYSVSHANFPVVQQLLDS-GVCKVDKQ-NRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQ  181 (276)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-SCCCTTCC-CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTT
T ss_pred             cCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCCCC-CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCC
Confidence            35688899999999999999999999998 33345444 556677778888     668999999999999884 88999


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCC
Q 037827          103 ENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRP  167 (263)
Q Consensus       103 ~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~  167 (263)
                      .|+||||+|+..|+.++|++|++.|+++               ..++.+++..|+...+..++.+|.+|.||||+|+++ 
T Consensus       182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~-  260 (276)
T 4hbd_A          182 AGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDA-  260 (276)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHH-
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHc-
Confidence            9999999999999999999999888862               456677777777755666777888888888888886 


Q ss_pred             CCCcCCcchHHHHHHcccC
Q 037827          168 KAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       168 ~~f~s~~~~~~~~~li~~~  186 (263)
                            ++.++++.|+...
T Consensus       261 ------g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          261 ------GQSEIASMLYSRM  273 (276)
T ss_dssp             ------TCHHHHHHHHHHC
T ss_pred             ------CCHHHHHHHHhcc
Confidence                  6678888887653

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.84  E-value=1.2e-21  Score=176.93  Aligned_cols=93  Identities=10%  Similarity=0.001  Sum_probs=77.9

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCc---HHHHHHHHHcC-CCCCCCCCCCCC
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGK---LELISTLIRYE-ADLPNVRDEENL  105 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~---~eiv~~Ll~~g-a~l~~~~d~~G~  105 (263)
                      .+..|+||||+|+..|+.++|+.||+.  +..++.. +..|.+..++||..|+   .++++.|++.+ ++ ++.+|..|+
T Consensus       127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~-d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~-~~~~d~~g~  202 (327)
T 1sw6_A          127 VDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYG-DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC-LILEDSMNR  202 (327)
T ss_dssp             CSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBC-CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG-GGEECTTCC
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc-ccCCCCCCC
Confidence            678899999999999999999999987  4555544 5667888889999998   78888888876 66 489999999


Q ss_pred             cHHHHHHH----cCCHHHHHHHHhC
Q 037827          106 LPIHRAAK----QGQRNVVCYLLEK  126 (263)
Q Consensus       106 TPLh~Aa~----~g~~evv~~Ll~~  126 (263)
                      ||||+|+.    .|+.++|++|++.
T Consensus       203 tpLh~A~~~~~~~g~~~~v~~Ll~~  227 (327)
T 1sw6_A          203 TILHHIIITSGMTGCSAAAKYYLDI  227 (327)
T ss_dssp             CHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred             CHHHHHHHHccccccHHHHHHHHHH
Confidence            99999998    8999999999764

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.84  E-value=8.7e-21  Score=155.69  Aligned_cols=136  Identities=17%  Similarity=0.100  Sum_probs=118.8

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L  109 (179)
T 3f6q_A           34 QGDDHGFSPLHWACREGRSAVVEMLIMR--GARINVM-NRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPL  109 (179)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             ccCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHH
Confidence            4677899999999999999999999987  3444444 556788889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      |+|+..|+.++|++|+++                   +..++.+|.+|.||||+|++.       ++..+++.|+..|++
T Consensus       110 ~~A~~~~~~~~v~~Ll~~-------------------ga~~~~~~~~g~tpl~~A~~~-------~~~~~~~~L~~~g~~  163 (179)
T 3f6q_A          110 HYACFWGQDQVAEDLVAN-------------------GALVSICNKYGEMPVDKAKAP-------LRELLRERAEKMGQN  163 (179)
T ss_dssp             HHHHHTTCHHHHHHHHHT-------------------TCCSSBCCTTSCCGGGGSCHH-------HHHHHHHHHHHTTCC
T ss_pred             HHHHHcCCHHHHHHHHHC-------------------CCCcchhccCCCCcHHHHHHH-------HHHHHHHHHHHhhcC
Confidence            999999999999999643                   334677899999999999876       788999999999999


Q ss_pred             CCCCCC
Q 037827          189 VQEEYN  194 (263)
Q Consensus       189 v~~~~~  194 (263)
                      ++....
T Consensus       164 ~~~~~~  169 (179)
T 3f6q_A          164 LNRIPY  169 (179)
T ss_dssp             CSCBCC
T ss_pred             cccCCc
Confidence            987653

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.83  E-value=6.6e-21  Score=164.73  Aligned_cols=140  Identities=13%  Similarity=0.029  Sum_probs=111.5

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCccccccc-------------CCcCHHHHHHHhCCcHHHHHHHHH---cCC
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIV-------------DQSSIFEFIVASTGKLELISTLIR---YEA   94 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~-------------~~g~iv~~~AA~~G~~eiv~~Ll~---~ga   94 (263)
                      |..|+||||.|+..|+.++|+.|++.  +..++....             ..|....++||..|+.++|++|++   +|+
T Consensus        90 d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga  167 (260)
T 3jxi_A           90 YYRGQTALHIAIERRCKHYVELLVEK--GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA  167 (260)
T ss_dssp             SEESBCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHhC--CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence            44899999999999999999999997  344444321             356888899999999999999999   999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827           95 DLPNVRDEENLLPIHRAAKQGQ---------RNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK  165 (263)
Q Consensus        95 ~l~~~~d~~G~TPLh~Aa~~g~---------~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~  165 (263)
                      ++ +.+|..|+||||+|+..|+         .+++++|+++|++            +.......+.+|.+|.||||+|++
T Consensus       168 ~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~------------~~~~~~~~~~~d~~g~tpL~~A~~  234 (260)
T 3jxi_A          168 DL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK------------LFPDTNLEALLNNDGLSPLMMAAK  234 (260)
T ss_dssp             CT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH------------HCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc------------cccccchhhcccCCCCCHHHHHHH
Confidence            95 9999999999999999887         5777777654432            101112236789999999999999


Q ss_pred             CCCCCcCCcchHHHHHHcccCCCCCCC
Q 037827          166 RPKAFASGIRLGYWKGLLYQWIPVQEE  192 (263)
Q Consensus       166 ~~~~f~s~~~~~~~~~li~~~~~v~~~  192 (263)
                      +       ++.++++.|+.+|......
T Consensus       235 ~-------g~~~~v~~Ll~~g~~~~~~  254 (260)
T 3jxi_A          235 T-------GKIGIFQHIIRREIADAAA  254 (260)
T ss_dssp             T-------TCHHHHHHHHHHHHHHHC-
T ss_pred             c-------CCHHHHHHHHHhCCCcccc
Confidence            8       7889999999988654433

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.83  E-value=2.7e-20  Score=150.39  Aligned_cols=128  Identities=15%  Similarity=0.028  Sum_probs=108.1

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L  112 (165)
T 3twr_A           37 DIEGRQSTPLHFAAGYNRVSVVEYLLQH--GADVHAK-DKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPL  112 (165)
T ss_dssp             CTTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred             ccccCCCCHHHHHHHcChHHHHHHHHhc--CCCCCcc-CCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHH
Confidence            4566789999999999999999999997  3444444 556788889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      |+|+..|+.++|++|+++|                   ..++.+|.+|.||||+|++        ++.++++.|+..|+
T Consensus       113 ~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~~~~g~t~l~~a~~--------~~~~i~~~L~~~gA  164 (165)
T 3twr_A          113 HEAAAKGKYEICKLLLQHG-------------------ADPTKKNRDGNTPLDLVKD--------GDTDIQDLLRGDAA  164 (165)
T ss_dssp             HHHHHTTCHHHHHHHHHTT-------------------CCTTCCCTTSCCTGGGSCT--------TCHHHHHHHHTC--
T ss_pred             HHHHHcCCHHHHHHHHHcC-------------------CCCcccCCCCCChhHhHhc--------CChHHHHHHhhccc
Confidence            9999999999999996433                   3467789999999999654        46699999987763

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.83  E-value=6.4e-21  Score=149.88  Aligned_cols=125  Identities=14%  Similarity=0.043  Sum_probs=104.8

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L   80 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQN--GSDPNVK-DHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPL   80 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHH
Confidence            4578899999999999999999999987  3444443 556788889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL  183 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li  183 (263)
                      |+|+..|+.+++++|++.                   +..++.+|.+|.||||+|+..       +..++++.+.
T Consensus        81 ~~A~~~~~~~~v~~Ll~~-------------------ga~~~~~~~~g~tpl~~A~~~-------~~~~~l~~l~  129 (137)
T 3c5r_A           81 HDAAKNGHVDIVKLLLSY-------------------GASRNAVNIFGLRPVDYTDDE-------SMKSLLLLPE  129 (137)
T ss_dssp             HHHHHTTCHHHHHHHHHT-------------------TCCTTCCCTTSCCGGGGCCCH-------HHHHHHSCC-
T ss_pred             HHHHHcCCHHHHHHHHHc-------------------CCCCCCCCCCCCCHHHHHhhc-------cHHHHHhhcc
Confidence            999999999999999643                   334678899999999999875       4555555443

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.83  E-value=2.2e-20  Score=151.16  Aligned_cols=131  Identities=12%  Similarity=0.027  Sum_probs=112.4

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L  106 (167)
T 3v31_A           31 HTDEEGFTPLMWAAAHGQIAVVEFLLQN--GADPQLL-GKGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPL  106 (167)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHH
T ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHH
Confidence            4677899999999999999999999987  3344333 556678889999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      |+|+..|+.+++++|+++                   +..++.+|.+|.||||+|++.       ++.++++.|+..+.+
T Consensus       107 ~~A~~~~~~~~v~~Ll~~-------------------g~~~~~~~~~g~t~l~~A~~~-------~~~~~~~~L~~~~~~  160 (167)
T 3v31_A          107 LYAVHGNHVKCVKMLLES-------------------GADPTIETDSGYNSMDLAVAL-------GYRSVQQVIESHLLK  160 (167)
T ss_dssp             HHHHHTTCHHHHHHHHHT-------------------TCCTTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHc-------------------CCCCCCcCCCCCCHHHHHHHc-------CcHHHHHHHHHHHHH
Confidence            999999999999999643                   334577899999999999997       678999999887654


Q ss_pred             C
Q 037827          189 V  189 (263)
Q Consensus       189 v  189 (263)
                      +
T Consensus       161 ~  161 (167)
T 3v31_A          161 L  161 (167)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.83  E-value=6.3e-20  Score=141.76  Aligned_cols=113  Identities=19%  Similarity=0.213  Sum_probs=95.8

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR  110 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~  110 (263)
                      +..+.+|||.|+..|+.+.++.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~   79 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAK--GEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLS   79 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSC-CTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHc--CCCcCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHH
Confidence            45688999999999999999999987  3344444 556788889999999999999999999995 9999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827          111 AAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      |+..|+.++|++|+++                   +..++.+|.+|.||||+|+..
T Consensus        80 A~~~~~~~~v~~Ll~~-------------------ga~~~~~~~~g~t~l~~A~~~  116 (123)
T 3aaa_C           80 AVYEGHVSCVKLLLSK-------------------GADKTVKGPDGLTAFEATDNQ  116 (123)
T ss_dssp             HHHHTCHHHHHHHHHT-------------------TCCTTCCCTTSCCHHHHCCCH
T ss_pred             HHHcCCHHHHHHHHHc-------------------CCCCCCcCCCCCCHHHHhCCH
Confidence            9999999999999643                   334677899999999998653

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.82  E-value=3.9e-20  Score=154.85  Aligned_cols=143  Identities=12%  Similarity=-0.002  Sum_probs=112.8

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcH----HHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKL----ELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~----eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      .++++||.|++.|+++.++.++.. +...   ..+..|....++|+..|+.    +++++|+++|+++ +.+|.+|+|||
T Consensus         5 ~~~~~l~~Aa~~g~~~~~~~l~~~-~~~~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpL   79 (186)
T 3t8k_A            5 SEYRTVSAAAMLGTYEDFLELFEK-GYED---KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLF   79 (186)
T ss_dssp             HHCSSHHHHHHHSCHHHHHHHHHH-SSSC---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTH
T ss_pred             ccccHHHHHHHcCCHHHHHHHHhc-Cccc---ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHH
Confidence            467899999999999999999987 4332   2224467888999999975    5999999999995 99999999999


Q ss_pred             HHHHHcCC------HHHHHHHHhCCCCC----------------C-----CCCHHHHHHHHHhCCCccccccCCCchHHH
Q 037827          109 HRAAKQGQ------RNVVCYLLEKTRAP----------------L-----DGSDDVAYGLLRKHPKLAWAEIAGTGKILE  161 (263)
Q Consensus       109 h~Aa~~g~------~evv~~Ll~~~a~p----------------~-----~~~~~va~~Ll~~~~~~~~~~D~~G~TPLH  161 (263)
                      |+|+..|+      .++|++|+++|+++                .     .+..+++..|+...+..++.+|.+|.||||
T Consensus        80 h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~  159 (186)
T 3t8k_A           80 FPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE  159 (186)
T ss_dssp             HHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred             HHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence            99999998      68899999999872                1     112346666776356667888999999999


Q ss_pred             HHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          162 LLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       162 lAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      +|++.       ++..+++.|.....
T Consensus       160 ~A~~~-------~~~~~v~~L~~~~~  178 (186)
T 3t8k_A          160 FVKRC-------QKPIALKMMEDYIK  178 (186)
T ss_dssp             HHHTT-------TCHHHHHHHHHHHH
T ss_pred             HHHHc-------CCHHHHHHHHHHHH
Confidence            98887       55677777765543

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.82  E-value=2.9e-20  Score=157.67  Aligned_cols=135  Identities=11%  Similarity=0.033  Sum_probs=106.4

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCcH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRY-EADLPNVRDEENLLP  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~TP  107 (263)
                      ..+..|.||||.|+..|+.++++.|++.  +..++.. +..|....++||..|+.++|++|+++ |+++ +.+|..|+||
T Consensus        68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tp  143 (222)
T 3ehr_A           68 EQAESIDNPLHEAAKRGNLSWLRECLDN--RVGVNGL-DKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTA  143 (222)
T ss_dssp             HHEEEESCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCH
T ss_pred             ccccccccccccccccCcHHHHHHHHhC--CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCH
Confidence            4566789999999999999999999987  3445444 56678888999999999999999999 9995 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      ||+|+..|+.++|++|++                  . +..++.+|.+|.||||+|+..       +..++++.++..++
T Consensus       144 L~~A~~~~~~~~v~~Ll~------------------~-ga~~~~~~~~g~t~l~~A~~~-------~~~~~l~~l~~~~~  197 (222)
T 3ehr_A          144 LHAAAWKGYADIVQLLLA------------------K-GARTDLRNIEKKLAFDMATNA-------ACASLLKKKQGTDA  197 (222)
T ss_dssp             HHHHHHHTCHHHHHHHHH------------------H-TCCSCCCCTTSCCHHHHCCSH-------HHHHHHC-------
T ss_pred             HHHHHHcCCHHHHHHHHH------------------c-CCCCccccCCCCCHHHHhcch-------hHHHHHHHHhccch
Confidence            999999999999999964                  3 334678899999999999976       78899999998887


Q ss_pred             CCCCCC
Q 037827          188 PVQEEY  193 (263)
Q Consensus       188 ~v~~~~  193 (263)
                      ..+..+
T Consensus       198 ~~~~~~  203 (222)
T 3ehr_A          198 VRTLSN  203 (222)
T ss_dssp             ------
T ss_pred             hhhccc
Confidence            665543

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.81  E-value=4.1e-20  Score=150.48  Aligned_cols=136  Identities=19%  Similarity=0.089  Sum_probs=108.5

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW  150 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~  150 (263)
                      ....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++++                   .++
T Consensus        15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------------~~~   74 (169)
T 2y1l_E           15 GKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-------------------DVN   74 (169)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------------------CTT
T ss_pred             cchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------CCC
Confidence            34455999999999999999999995 9999999999999999999999999975443                   356


Q ss_pred             cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh
Q 037827          151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH  230 (263)
Q Consensus       151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                      .+|.+|.||||+|+..       ++.++++.|+..|++++..+..+.++.+.++.             ....++..+|+.
T Consensus        75 ~~~~~g~t~L~~A~~~-------~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~  134 (169)
T 2y1l_E           75 AVDHAGMTPLRLAALF-------GHLEIVEVLLKNGADVNANDMEGHTPLHLAAM-------------FGHLEIVEVLLK  134 (169)
T ss_dssp             CCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-------------TTCHHHHHHHHH
T ss_pred             ccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-------------cCCHHHHHHHHH
Confidence            6788899999999987       67789999999888887776544433332222             222667778888


Q ss_pred             hhccc----cccCCccceec
Q 037827          231 WFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       231 ~~~~~----~~~~~~~~~~~  246 (263)
                      .|+|+    +.+.|||++|.
T Consensus       135 ~g~~~~~~~~~g~t~l~~A~  154 (169)
T 2y1l_E          135 NGADVNAQDKFGKTAFDISI  154 (169)
T ss_dssp             TTCCTTCCCTTSCCHHHHHH
T ss_pred             cCCCCCCcCCCCCCHHHHHH
Confidence            88887    67899999985

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.81  E-value=1.1e-19  Score=156.44  Aligned_cols=133  Identities=14%  Similarity=0.086  Sum_probs=111.6

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR  110 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~  110 (263)
                      +..+.||||.|+..|+.++|+.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus        34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~  109 (239)
T 1ycs_B           34 NPLPLALLLDSSLEGEFDLVQRIIYE--VDDPSLP-NDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHC  109 (239)
T ss_dssp             ---CHHHHHHHHHHTCHHHHHHHTST--TSSCCCC-CTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHH
T ss_pred             CchhhHHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHH
Confidence            35679999999999999999999987  3355444 566788899999999999999999999995 9999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCc-hHHHHH--hcCCCCCcCCcchHHHHHHcccCC
Q 037827          111 AAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTG-KILELL--SKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~-TPLHlA--A~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      |+..|+.++|++|+++|                   ..++.+|..|. ||||+|  +..       ++.++++.|+..++
T Consensus       110 A~~~~~~~~v~~Ll~~g-------------------a~~~~~~~~~~~t~l~~a~~~~~-------g~~~~~~~Ll~~~a  163 (239)
T 1ycs_B          110 AASCNNVQVCKFLVESG-------------------AAVFAMTYSDMQTAADKCEEMEE-------GYTQCSQFLYGVQE  163 (239)
T ss_dssp             HHHTTCHHHHHHHHHTT-------------------CCTTCCCSSSCCCHHHHCCSSST-------TCCCHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcC-------------------CCcceecCCCCcchHHHHHHhhh-------ccHHHHHHHHHhhh
Confidence            99999999999996543                   33566776666 999998  443       67899999999999


Q ss_pred             CCCCCC
Q 037827          188 PVQEEY  193 (263)
Q Consensus       188 ~v~~~~  193 (263)
                      +++..+
T Consensus       164 ~~~~~~  169 (239)
T 1ycs_B          164 KMGIMN  169 (239)
T ss_dssp             HTTTTG
T ss_pred             cccccc
Confidence            888764

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.80  E-value=6.8e-21  Score=167.95  Aligned_cols=171  Identities=15%  Similarity=0.069  Sum_probs=129.1

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCC-cccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC-CCCCCCCCCCCcHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPN-ALACIIVDQSSIFEFIVASTGKLELISTLIRYEA-DLPNVRDEENLLPIHRA  111 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~-~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga-~l~~~~d~~G~TPLh~A  111 (263)
                      .++++|.|+..|+++.++.++.. ... .++.. +..|....++||..|+.+++++|++.|+ + ++.+|..|+||||+|
T Consensus        76 ~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~a  152 (276)
T 4hbd_A           76 CRSDAHPELVRRHLVTFRAMSAR-LLDYVVNIA-DSNGNTALHYSVSHANFPVVQQLLDSGVCK-VDKQNRAGYSPIMLT  152 (276)
T ss_dssp             HSTTCCHHHHHHHHHHHHHHCHH-HHHHHHTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHG
T ss_pred             hccCCCHHHHHHHHHHHHHHHHH-HHhhcCcCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-CCCCCCCCCCHHHHH
Confidence            45677889999999999998875 222 23333 5667888899999999999999999998 7 599999999999999


Q ss_pred             H-----HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827          112 A-----KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       112 a-----~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~  186 (263)
                      +     ..++.+++++|+..|                   ...+..|..|.||||+|+++       ++.++++.|+..|
T Consensus       153 ~~~~~~~~~~~~~v~~Ll~~g-------------------~~~~~~~~~g~tpLh~A~~~-------g~~~~v~~Ll~~g  206 (276)
T 4hbd_A          153 ALATLKTQDDIETVLQLFRLG-------------------NINAKASQAGQTALMLAVSH-------GRVDVVKALLACE  206 (276)
T ss_dssp             GGCCCCSHHHHHHHHHHHHHS-------------------CTTCCCTTTCCCHHHHHHHT-------TCHHHHHHHHHTT
T ss_pred             HHHHhhhhhhHHHHHHHHHcC-------------------CCccccCCCCCCHHHHHHHc-------CCHHHHHHHHhCC
Confidence            9     567888888885432                   34456677888888888887       6678888888888


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh-hhccc----cccCCccceec
Q 037827          187 IPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH-WFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       187 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~  246 (263)
                      ++++..+..+.++.+.++...             ..++..+|+. .|+|+    +.|.|||++|.
T Consensus       207 ad~n~~d~~G~TpLh~A~~~g-------------~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~  258 (276)
T 4hbd_A          207 ADVNVQDDDGSTALMCACEHG-------------HKEIAGLLLAVPSCDISLTDRDGSTALMVAL  258 (276)
T ss_dssp             CCTTCCCTTSCCHHHHHHHHT-------------CHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHCC-------------CHHHHHHHHhcCCCCCcCcCCCCCCHHHHHH
Confidence            888877655544443333222             2556667777 68877    77889998885

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.80  E-value=2.8e-19  Score=153.88  Aligned_cols=138  Identities=14%  Similarity=0.037  Sum_probs=116.1

Q ss_pred             CcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q 037827           69 QSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKL  148 (263)
Q Consensus        69 ~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~  148 (263)
                      .+....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|++.|                   ..
T Consensus        20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-------------------a~   79 (229)
T 2vge_A           20 NPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAG-------------------AN   79 (229)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-------------------CC
T ss_pred             chhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-------------------CC
Confidence            3456677999999999999999999995 999999999999999999999999996433                   34


Q ss_pred             cccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCC-CCCCCCCCC--CChhhhhhhccccccccchhhh
Q 037827          149 AWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYN-PHAHAHSEN--VDGDLEKQLSETSHSAFGFELA  225 (263)
Q Consensus       149 ~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                      ++.+|.+|.||||+|++.       ++.++++.|+..|++++..++ .+.++.+.+  +....             .++.
T Consensus        80 ~n~~d~~g~tpLh~A~~~-------g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~-------------~~~v  139 (229)
T 2vge_A           80 VNSPDSHGWTPLHCAASC-------NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY-------------ADCA  139 (229)
T ss_dssp             TTCCCTTCCCHHHHHHHT-------TCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH-------------HHHH
T ss_pred             CCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh-------------HHHH
Confidence            677899999999999997       688999999999999998863 556666555  33333             6788


Q ss_pred             HHHHhhhccc----cccCCccceec
Q 037827          226 YLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       226 ~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      .+|+..|+|+    +.+.|||+.+.
T Consensus       140 ~~Ll~~ga~~~~~~~~~~~~l~~~~  164 (229)
T 2vge_A          140 TYLADVEQSMGLMNSGAVYALWDYS  164 (229)
T ss_dssp             HHHHHHHHHTTTSGGGEEEESSCBC
T ss_pred             HHHHHcCCCcccccCCchHHHHHHh
Confidence            8999999999    77889999663

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.79  E-value=1.1e-20  Score=175.13  Aligned_cols=171  Identities=13%  Similarity=0.014  Sum_probs=124.2

Q ss_pred             hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC--CCCCCCCC
Q 037827           27 KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL--PNVRDEEN  104 (263)
Q Consensus        27 ~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l--~~~~d~~G  104 (263)
                      ...++.++.||||.|+..|+.++|+.|++.+.+......++..+....++||..|+.++|++|+++|++.  ++..+.+ 
T Consensus        85 l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-  163 (376)
T 2aja_A           85 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-  163 (376)
T ss_dssp             HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-
T ss_pred             HHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-
Confidence            3456677889999999999999999999872211111112233466778999999999999999999852  0223333 


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccc--ccCCCchHHHHHh-cCCCCCcCCcchHHHHH
Q 037827          105 LLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWA--EIAGTGKILELLS-KRPKAFASGIRLGYWKG  181 (263)
Q Consensus       105 ~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~--~D~~G~TPLHlAA-~~~~~f~s~~~~~~~~~  181 (263)
                      +||||+||..||.++|++|+++|++                   ++.  .|.+|.||||+|| ++       |+.++++.
T Consensus       164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~-------------------~~~~~~d~~g~TpL~~Aa~~~-------G~~eiv~~  217 (376)
T 2aja_A          164 YHAFRLAAENGHLHVLNRLCELAPT-------------------EATAMIQAENYYAFRWAAVGR-------GHHNVINF  217 (376)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHSCGG-------------------GHHHHHHHHHHHHHHHHHSTT-------CCHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCc-------------------cchhccCCCCCCHHHHHHHHC-------CCHHHHHH
Confidence            9999999999999999999755432                   333  6778999999999 87       78899999


Q ss_pred             HcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccc--hhhhHHHHhhhccccccCCccceec
Q 037827          182 LLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFG--FELAYLLLHWFVSFRVSTTPLTLAT  246 (263)
Q Consensus       182 li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  246 (263)
                      |+..|+.                 +     -+.+.+++..  .++..+|+..|+++....++++.|.
T Consensus       218 Ll~~ga~-----------------~-----~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~  262 (376)
T 2aja_A          218 LLDCPVM-----------------L-----AYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSN  262 (376)
T ss_dssp             HTTSHHH-----------------H-----HHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTS
T ss_pred             HHhCCCc-----------------c-----chHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHH
Confidence            9976521                 1     1122233333  4567788888999977778898886

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.78  E-value=1.6e-19  Score=144.46  Aligned_cols=132  Identities=17%  Similarity=0.084  Sum_probs=105.9

Q ss_pred             HHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc
Q 037827           74 EFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI  153 (263)
Q Consensus        74 ~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D  153 (263)
                      .++|+..|+.+++++|+++|+++ + .|..|+||||+|+..|+.+++++|++.++                   .++.+|
T Consensus         6 L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------------~~~~~~   64 (153)
T 1awc_B            6 LLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-------------------SRDART   64 (153)
T ss_dssp             HHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-------------------CTTCCC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------CCCCCC
Confidence            34899999999999999999985 5 68999999999999999999999975433                   356678


Q ss_pred             CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhc
Q 037827          154 AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFV  233 (263)
Q Consensus       154 ~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .+|.||||+|++.       ++.++++.|+..|++++..+..+.++.+.++.             ....++..+|+..|+
T Consensus        65 ~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~ga  124 (153)
T 1awc_B           65 KVDRTPLHMAASE-------GHANIVEVLLKHGADVNAKDMLKMTALHWATE-------------HNHQEVVELLIKYGA  124 (153)
T ss_dssp             TTCCCHHHHHHHH-------TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH-------------TTCHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHc-------ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-------------cCCHHHHHHHHHcCC
Confidence            8899999999986       67799999999998888776544444333222             222667778888898


Q ss_pred             cc----cccCCccceec
Q 037827          234 SF----RVSTTPLTLAT  246 (263)
Q Consensus       234 ~~----~~~~~~~~~~~  246 (263)
                      ++    +.+.|||++|.
T Consensus       125 ~~~~~~~~g~t~l~~A~  141 (153)
T 1awc_B          125 DVHTQSKFCKTAFDISI  141 (153)
T ss_dssp             CTTCCCTTSCCHHHHHH
T ss_pred             CccccCCCCCCHHHHHH
Confidence            88    78899999995

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.78  E-value=1e-19  Score=150.72  Aligned_cols=140  Identities=14%  Similarity=-0.066  Sum_probs=112.8

Q ss_pred             cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827           67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP  146 (263)
Q Consensus        67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~  146 (263)
                      +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|++.++                  
T Consensus        32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------------   92 (192)
T 2rfm_A           32 DSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGS------------------   92 (192)
T ss_dssp             CTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC------------------
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCC------------------
Confidence            455677888999999999999999999995 9999999999999999999999999965333                  


Q ss_pred             CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827          147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY  226 (263)
Q Consensus       147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                       .++.+|..|.||||+|+..       ++.++++.|+..|++++..+..+.++.+.++...             ..++..
T Consensus        93 -~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-------------~~~~v~  151 (192)
T 2rfm_A           93 -NVNTKDFSGKTPLMWSIIF-------GYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG-------------RSEIVK  151 (192)
T ss_dssp             -CTTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT-------------CHHHHH
T ss_pred             -CCCCCCCCCCcHHHHHHHc-------CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-------------CHHHHH
Confidence             3566788899999999886       6778999999988888877655544443333222             256777


Q ss_pred             HHHhhhccc----cccCCccceec
Q 037827          227 LLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       227 ~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +|+..|+++    +.+.|||++|.
T Consensus       152 ~Ll~~ga~~~~~~~~g~t~l~~A~  175 (192)
T 2rfm_A          152 KLLELGADISARDLTGLTAEASAR  175 (192)
T ss_dssp             HHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred             HHHHCCCCCCCcCCCCCCHHHHHH
Confidence            788888888    67889999985

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.78  E-value=8.7e-19  Score=144.72  Aligned_cols=114  Identities=20%  Similarity=0.081  Sum_probs=97.3

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRD-EENLLP  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TP  107 (263)
                      ..+..|.||||.|+..|+.+.++.|++.   ..++.. +..|....++||..|+.+++++|+++|+++ +.+| ..|+||
T Consensus        39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tp  113 (183)
T 3deo_A           39 DVVSEYETPWWTAARKADEQALSQLLED---RDVDAV-DENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTA  113 (183)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHTTT---SCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCH
T ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCH
Confidence            3456889999999999999999999984   344443 566788889999999999999999999995 9998 899999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR  166 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~  166 (263)
                      ||+|+..|+.++|++|+++|                   ..++.+|.+|.||||+|++.
T Consensus       114 L~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~d~~g~tpl~~A~~~  153 (183)
T 3deo_A          114 LHMAAGYVRPEVVEALVELG-------------------ADIEVEDERGLTALELAREI  153 (183)
T ss_dssp             HHHHHHTTCHHHHHHHHHHT-------------------CCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHhcCcHHHHHHHHHcC-------------------CCCcCCCCCCCCHHHHHHHh
Confidence            99999999999999996433                   33567788899999988875

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.77  E-value=1.7e-18  Score=127.47  Aligned_cols=93  Identities=20%  Similarity=0.245  Sum_probs=82.9

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA  112 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa  112 (263)
                      +|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~n~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~   76 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA   76 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHc--CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence            478999999999999999999987  3445444 566788889999999999999999999995 999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCC
Q 037827          113 KQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~  129 (263)
                      ..|+.+++++|+++|++
T Consensus        77 ~~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           77 RNGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             HTTCHHHHHHHHHTTCC
T ss_pred             HcCCHHHHHHHHHcCCC
Confidence            99999999999999874

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.77  E-value=3.2e-19  Score=143.17  Aligned_cols=141  Identities=17%  Similarity=0.041  Sum_probs=112.5

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCH
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSD  135 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~  135 (263)
                      ....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+. |+.+++++|++.++++               ..++.
T Consensus         6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   83 (162)
T 1ihb_A            6 GNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   83 (162)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             hhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence            34456899999999999999999995 9999999999999999 9999999999999862               56788


Q ss_pred             HHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC-CCCCCCCCCCCCCCCCChhhhhhhcc
Q 037827          136 DVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP-VQEEYNPHAHAHSENVDGDLEKQLSE  214 (263)
Q Consensus       136 ~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~  214 (263)
                      +++..|+..+ ..++.+|.+|.||||+|++.       ++.++++.|+..|.+ ++..+..+.++.+.++          
T Consensus        84 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~----------  145 (162)
T 1ihb_A           84 DTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKE-------GHLRVVEFLVKHTASNVGHRNHKGDTACDLAR----------  145 (162)
T ss_dssp             HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH----------
T ss_pred             HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHccCCCCCCcCCCCCcHHHHHH----------
Confidence            9999999875 55788999999999999997       678999999999986 4555443333332222          


Q ss_pred             ccccccchhhhHHHHhhhcc
Q 037827          215 TSHSAFGFELAYLLLHWFVS  234 (263)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~  234 (263)
                         .....++..+|+..|||
T Consensus       146 ---~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          146 ---LYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             ---HTTCHHHHHHHHHTC--
T ss_pred             ---HcCCHHHHHHHHHhCCC
Confidence               22236777888888886

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.77  E-value=1.1e-19  Score=164.02  Aligned_cols=185  Identities=12%  Similarity=-0.032  Sum_probs=126.8

Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCC-
Q 037827           38 VTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQ-  116 (263)
Q Consensus        38 Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~-  116 (263)
                      +|.|+..+..++++.|++.  +..++...+..|.+..++||..|+.++|++|+++|+++ +.+|.+|+||||+|+..|+ 
T Consensus       101 ~~~a~~~~~~~~~~~l~~~--g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~  177 (327)
T 1sw6_A          101 QHVSFDSLLQEVNDAFPNT--QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNN  177 (327)
T ss_dssp             ---CHHHHHHHHHHHCTTS--CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHH
T ss_pred             hHHHHHhhHHHHHHHHHhc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhccc
Confidence            4667777777777777765  55565533667888999999999999999999999995 9999999999999999998 


Q ss_pred             --HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc---------
Q 037827          117 --RNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ---------  185 (263)
Q Consensus       117 --~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~---------  185 (263)
                        .++++.|+.                  .....++.+|.+|.||||+|++...   ..++.++++.|+..         
T Consensus       178 ~~~~~~~~ll~------------------~~~~~~~~~d~~g~tpLh~A~~~~~---~~g~~~~v~~Ll~~~~~~~~~~~  236 (327)
T 1sw6_A          178 YDSGTFEALLD------------------YLYPCLILEDSMNRTILHHIIITSG---MTGCSAAAKYYLDILMGWIVKKQ  236 (327)
T ss_dssp             HHTTCHHHHHH------------------HHGGGGGEECTTCCCHHHHHHHHHT---STTCHHHHHHHHHHHHHHHHHGG
T ss_pred             ccHHHHHHHHH------------------hhhccccCCCCCCCCHHHHHHHHcc---ccccHHHHHHHHHHHHHHHhccc
Confidence              677776642                  2223478889999999999998311   02678999999876         


Q ss_pred             -----------CCCCCCCCCCCCCCCCCC----------CChhhhhhhccccccccc--hhhhHHHHhhhccc----ccc
Q 037827          186 -----------WIPVQEEYNPHAHAHSEN----------VDGDLEKQLSETSHSAFG--FELAYLLLHWFVSF----RVS  238 (263)
Q Consensus       186 -----------~~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~  238 (263)
                                 +++++..+..+.++.+.+          ++..+..+-+.+-+++..  .++..+|+..|||+    +.|
T Consensus       237 ~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G  316 (327)
T 1sw6_A          237 NRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG  316 (327)
T ss_dssp             GCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS
T ss_pred             chHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence                       566666654443333322          222233344455555554  56667788889999    889


Q ss_pred             CCccceec
Q 037827          239 TTPLTLAT  246 (263)
Q Consensus       239 ~~~~~~~~  246 (263)
                      .||||+|.
T Consensus       317 ~TpL~~A~  324 (327)
T 1sw6_A          317 LRPVDFGA  324 (327)
T ss_dssp             CCGGGGTC
T ss_pred             CCHHHHHH
Confidence            99999996

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.76  E-value=4.6e-18  Score=150.67  Aligned_cols=126  Identities=9%  Similarity=0.016  Sum_probs=107.5

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCccccc-----ccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACI-----IVDQSSIFEFIVAST---GKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~-----i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      ..++|+.|+..|+.+.++.++.. .... ...     .+..|....++||..   |+.+++++|+++|+++ +.+|..|+
T Consensus       130 ~l~~l~~a~~~~d~~~~~~ll~~-g~~~-~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~  206 (278)
T 1dcq_A          130 KLHSLCEAVKTRDIFGLLQAYAD-GVDL-TEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGS  206 (278)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHT-TCCT-TSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCC
T ss_pred             hhhhhhhHhhhcccHHHHHHHHh-hcch-hhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCC
Confidence            35789999999999999999987 3332 221     144568888999999   9999999999999995 99999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~  185 (263)
                      ||||+|+..|+.++|++|+++                   +..++.+|.+|.||||+|++.       ++.++++.|+..
T Consensus       207 TpLh~A~~~g~~~~v~~Ll~~-------------------gad~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~  260 (278)
T 1dcq_A          207 TALHYCCLTDNAECLKLLLRG-------------------KASIEIANESGETPLDIAKRL-------KHEHCEELLTQA  260 (278)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-------------------TCCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-------------------CCCCCCccCCCCCHHHHHHHc-------CCHHHHHHHHHc
Confidence            999999999999999999643                   344678899999999999997       678999999999


Q ss_pred             CCC
Q 037827          186 WIP  188 (263)
Q Consensus       186 ~~~  188 (263)
                      |+.
T Consensus       261 ga~  263 (278)
T 1dcq_A          261 LSG  263 (278)
T ss_dssp             HTT
T ss_pred             CCC
Confidence            864

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.75  E-value=1.8e-18  Score=149.68  Aligned_cols=141  Identities=18%  Similarity=0.058  Sum_probs=104.5

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRD-EENLLP  107 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TP  107 (263)
                      ..+..|.||||.|+..|+.++++.|++.   ..++.. +..|.+..++||..|+.++|++|+++|+++ +.+| ..|+||
T Consensus        40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~  114 (244)
T 3ui2_A           40 DVVSEYETPWWTAARKADEQALSQLLED---RDVDAV-DENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTA  114 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTCHHHHHHTTTT---CCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCH
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHcC---CCCCCc-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCH
Confidence            3446789999999999999999999984   344444 566788899999999999999999999995 9998 889999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC--CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAP--LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p--~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~  185 (263)
                      ||+|+..|+.++|++|+++|+++  .......++.+...     ...+..|.||||+|++.       ++.++++.|+..
T Consensus       115 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~-----~~~~~~~~~~l~~a~~~-------g~~~iv~~L~~~  182 (244)
T 3ui2_A          115 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE-----ILKTTPKGNPMQFGRRI-------GLEKVINVLEGQ  182 (244)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-----HHTTCCCSSHHHHHHHH-------HHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-----HHhccCCCCHHHHHHHc-------ChHHHHHHHHHh
Confidence            99999999999999998776652  11111111111111     11123455555555554       677899988875


Q ss_pred             C
Q 037827          186 W  186 (263)
Q Consensus       186 ~  186 (263)
                      +
T Consensus       183 ~  183 (244)
T 3ui2_A          183 V  183 (244)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.75  E-value=5.9e-18  Score=151.69  Aligned_cols=126  Identities=12%  Similarity=0.084  Sum_probs=107.5

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCccccc-----ccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACI-----IVDQSSIFEFIVAST---GKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~-----i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      ..++|+.|+..|+++.++.|+..  ...++..     .+..|....++|+..   |+.+++++|+++|+++ +.+|..|+
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~  227 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGN  227 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCC
T ss_pred             hHHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCC
Confidence            45789999999999999999987  2333331     245567888999987   9999999999999995 99999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~  185 (263)
                      ||||+|+..|+.++|++|+++                   +..++.+|.+|.||||+|+..       ++.++++.|+..
T Consensus       228 TpLh~A~~~g~~~~v~~Ll~~-------------------gad~~~~d~~G~TpL~~A~~~-------~~~~iv~~Ll~~  281 (301)
T 2b0o_E          228 TALHYAALYNQPDCLKLLLKG-------------------RALVGTVNEAGETALDIARKK-------HHKECEELLEQA  281 (301)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-------------------TCCCSCCCTTSCCHHHHHHHH-------TCHHHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-------------------CCCCCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHh
Confidence            999999999999999999643                   344678899999999999987       678999999998


Q ss_pred             CCC
Q 037827          186 WIP  188 (263)
Q Consensus       186 ~~~  188 (263)
                      |++
T Consensus       282 ga~  284 (301)
T 2b0o_E          282 QAG  284 (301)
T ss_dssp             HHH
T ss_pred             cCC
Confidence            876

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.75  E-value=7e-18  Score=124.18  Aligned_cols=91  Identities=29%  Similarity=0.270  Sum_probs=80.7

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW  150 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~  150 (263)
                      ....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++|                   ..++
T Consensus         3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------------a~~~   62 (93)
T 1n0q_A            3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG-------------------ADVN   62 (93)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-------------------CCTT
T ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-------------------CCCC
Confidence            44567999999999999999999995 999999999999999999999999996543                   3467


Q ss_pred             cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                      .+|.+|.||||+|++.       ++.++++.|+..|++
T Consensus        63 ~~d~~g~t~l~~A~~~-------~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           63 AKDKNGRTPLHLAARN-------GHLEVVKLLLEAGAY   93 (93)
T ss_dssp             CCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCC
T ss_pred             ccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCC
Confidence            7899999999999997       678999999988863

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.75  E-value=9.4e-19  Score=137.60  Aligned_cols=127  Identities=14%  Similarity=-0.049  Sum_probs=103.7

Q ss_pred             cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827           67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP  146 (263)
Q Consensus        67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~  146 (263)
                      +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+. |+.++|++|+++                   +
T Consensus         9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------------------g   67 (136)
T 1d9s_A            9 GGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLH-------------------G   67 (136)
T ss_dssp             CCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHH-------------------T
T ss_pred             CCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHC-------------------C
Confidence            455677888999999999999999999995 9999999999999999 999999999643                   2


Q ss_pred             CccccccCC-CchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhh
Q 037827          147 KLAWAEIAG-TGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELA  225 (263)
Q Consensus       147 ~~~~~~D~~-G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                      ..++.+|.. |.||||+|++.       ++.++++.|+..|++++..+..+.++.+.++...             ..++.
T Consensus        68 ~~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-------------~~~~~  127 (136)
T 1d9s_A           68 AEPNCADPATLTRPVHDAARE-------GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG-------------HRDIA  127 (136)
T ss_dssp             CCSSCCBTTTTBCHHHHHHHH-------TCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT-------------CHHHH
T ss_pred             CCCCCcCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-------------CHHHH
Confidence            346778888 99999999997       6789999999999998887655544443333222             26677


Q ss_pred             HHHHhhhcc
Q 037827          226 YLLLHWFVS  234 (263)
Q Consensus       226 ~~~~~~~~~  234 (263)
                      .+|+..|||
T Consensus       128 ~~Ll~~Gad  136 (136)
T 1d9s_A          128 RYLHAATGD  136 (136)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHcCCC
Confidence            788888876

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.74  E-value=5.8e-19  Score=141.96  Aligned_cols=137  Identities=13%  Similarity=-0.042  Sum_probs=101.1

Q ss_pred             CCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q 037827           68 DQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPK  147 (263)
Q Consensus        68 ~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~  147 (263)
                      ..+....++||..|+.+++++|+++|+++ +.+|..|+||||+|+ .|+.++|++|+++|                   .
T Consensus        10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-------------------~   68 (156)
T 1bi7_B           10 EPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHG-------------------A   68 (156)
T ss_dssp             CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-------------------C
T ss_pred             ccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-------------------C
Confidence            34567778999999999999999999995 999999999999985 99999999996433                   3


Q ss_pred             ccccccCCCch-HHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827          148 LAWAEIAGTGK-ILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY  226 (263)
Q Consensus       148 ~~~~~D~~G~T-PLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                      .++.+|.+|.| |||+|+++       ++.++++.|+..|++++..+..+.++.+.++...             ..++..
T Consensus        69 ~~~~~d~~g~ttpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-------------~~~~v~  128 (156)
T 1bi7_B           69 EPNCADPATLTRPVHDAARE-------GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG-------------HRDVAR  128 (156)
T ss_dssp             CCCCCCTTTCCCHHHHHHHH-------TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT-------------CHHHHH
T ss_pred             CCCCcCCCCCcHHHHHHHHC-------CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC-------------HHHHHH
Confidence            46778999999 99999997       7789999999999999887654444443332222             267778


Q ss_pred             HHHhhhccc----cccCCcccee
Q 037827          227 LLLHWFVSF----RVSTTPLTLA  245 (263)
Q Consensus       227 ~~~~~~~~~----~~~~~~~~~~  245 (263)
                      +|+..|++.    +.++||.+-+
T Consensus       129 ~Ll~~ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B          129 YLRAAAGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             HHSSCC-----------------
T ss_pred             HHHHcCCCCCccCcCcCcccccC
Confidence            888899999    7888988744

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.74  E-value=1e-17  Score=129.27  Aligned_cols=111  Identities=18%  Similarity=0.027  Sum_probs=95.4

Q ss_pred             cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827           70 SSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA  149 (263)
Q Consensus        70 g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~  149 (263)
                      +....++|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.++|++|++.+                   ..+
T Consensus         7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------------~~~   66 (123)
T 3aaa_C            7 CDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKG-------------------ADI   66 (123)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-------------------CCT
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcC-------------------CCC
Confidence            355667999999999999999999995 999999999999999999999999996533                   346


Q ss_pred             ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChh
Q 037827          150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGD  207 (263)
Q Consensus       150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~  207 (263)
                      +.+|.+|.||||+|+..       ++.++++.|+..|++++..+..+.++.+.++..+
T Consensus        67 ~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~  117 (123)
T 3aaa_C           67 NAPDKHHITPLLSAVYE-------GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA  117 (123)
T ss_dssp             TCCCTTSCCHHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred             CcCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence            77899999999999997       6789999999999999988876666666555444

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.73  E-value=1.6e-17  Score=153.39  Aligned_cols=129  Identities=12%  Similarity=0.073  Sum_probs=108.9

Q ss_pred             hcccChHHHHHHHHc-CCHHHHHHHHhccCCCcccccc-cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           30 KDIANYKQVTRYLLE-DDWKGLEDYIMSKTPNALACII-VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~-G~~e~v~~Ll~~~~~~~~~~~i-~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ....+.++||.|+.. |++++++.||+.  +..++... +..|....++||..|+.++|++|+++|+++ +.+|..|+||
T Consensus       195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~Tp  271 (368)
T 3jue_A          195 GSLHPGALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGP  271 (368)
T ss_dssp             --CCHHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred             ccCCCCcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence            444567899999999 999999999987  34444442 145678889999999999999999999995 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      ||+|+..|+.++|++|+.+|                   ..++.+|.+|.||||+|+..       ++.++++.|+..+.
T Consensus       272 Lh~A~~~g~~~~v~~LL~~G-------------------ad~~~~d~~G~TpL~~A~~~-------g~~~iv~lLl~~~~  325 (368)
T 3jue_A          272 LHHATILGHTGLACLFLKRG-------------------ADLGARDSEGRDPLTIAMET-------ANADIVTLLRLAKM  325 (368)
T ss_dssp             HHHHHHHTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHHC
T ss_pred             HHHHHHcCcHHHHHHHHHCc-------------------CCCCCcCCCCCCHHHHHHHC-------CCHHHHHHHHHcCC
Confidence            99999999999999996433                   34678899999999999997       67899999987763

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.73  E-value=2.8e-17  Score=128.93  Aligned_cols=115  Identities=19%  Similarity=0.154  Sum_probs=100.5

Q ss_pred             cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827           67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP  146 (263)
Q Consensus        67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~  146 (263)
                      +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++++                   
T Consensus         7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-------------------   66 (137)
T 3c5r_A            7 NHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHK-------------------   66 (137)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-------------------
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-------------------
Confidence            455678888999999999999999999995 999999999999999999999999996543                   


Q ss_pred             CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827          147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL  208 (263)
Q Consensus       147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  208 (263)
                      ..++.+|.+|.||||+|++.       ++.++++.|+..|++++..+..+.++.+.++....
T Consensus        67 ~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~  121 (137)
T 3c5r_A           67 ALVNTTGYQNDSPLHDAAKN-------GHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM  121 (137)
T ss_dssp             CCTTCCCGGGCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred             CcccCcCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH
Confidence            34677899999999999997       67899999999999999988777777777766554

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.73  E-value=2.3e-17  Score=147.81  Aligned_cols=129  Identities=16%  Similarity=0.024  Sum_probs=104.6

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNV------RDEENLLPIHRAAKQ---GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP  146 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~------~d~~G~TPLh~Aa~~---g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~  146 (263)
                      .|+..|+.+.++.|++.|+++ +.      +|..|+||||+|+..   |+.++|++|+.                  . +
T Consensus       157 ~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~------------------~-g  216 (301)
T 2b0o_E          157 TAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ------------------N-G  216 (301)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHH------------------H-S
T ss_pred             hhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHh------------------c-C
Confidence            899999999999999999995 87      799999999999997   89999999964                  3 3


Q ss_pred             CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827          147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY  226 (263)
Q Consensus       147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                      ..++.+|.+|.||||+|+..       ++.++++.|+..|++++..+..+.++.+.++....             .++..
T Consensus       217 advn~~d~~G~TpLh~A~~~-------g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~-------------~~iv~  276 (301)
T 2b0o_E          217 GHLDAKAADGNTALHYAALY-------NQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH-------------KECEE  276 (301)
T ss_dssp             SCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTC-------------HHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-------------HHHHH
Confidence            34677899999999999997       78899999999999999887655444433332222             56777


Q ss_pred             HHHhhhccccccCCccceec
Q 037827          227 LLLHWFVSFRVSTTPLTLAT  246 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~  246 (263)
                      +|+..+++  .+.||||+|.
T Consensus       277 ~Ll~~ga~--~g~tpLh~A~  294 (301)
T 2b0o_E          277 LLEQAQAG--TFAFPLHVDY  294 (301)
T ss_dssp             HHHHHHHH--TTSSCCC---
T ss_pred             HHHHhcCC--CCCChhHHHH
Confidence            88888888  6889999996

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.72  E-value=2.5e-18  Score=143.82  Aligned_cols=153  Identities=11%  Similarity=0.022  Sum_probs=112.2

Q ss_pred             HHHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827           75 FIVASTGKLELISTLIRYEADLPNVRD-EENLLPIHRAAKQGQR----NVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA  149 (263)
Q Consensus        75 ~~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TPLh~Aa~~g~~----evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~  149 (263)
                      +.||..|+.+.++.++..+.+   .++ ..|+||||+|+.+|+.    ++|++|+++                   +..+
T Consensus        11 ~~Aa~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-------------------Gadv   68 (186)
T 3t8k_A           11 SAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFLINK-------------------GADI   68 (186)
T ss_dssp             HHHHHHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-------------------TCCS
T ss_pred             HHHHHcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-------------------CCCC
Confidence            379999999999999988754   355 7899999999999985    488888543                   3457


Q ss_pred             ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCC-CCCCCCCChh-hhhhhccccccccchhhhHH
Q 037827          150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHA-HAHSENVDGD-LEKQLSETSHSAFGFELAYL  227 (263)
Q Consensus       150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  227 (263)
                      +.+|.+|.||||+|+..+.. .....+++++.|+..|++|+..+..+. ++.|.++.-. .++         ...++..+
T Consensus        69 n~~d~~g~TpLh~a~~~~~~-~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~---------~~~~iv~~  138 (186)
T 3t8k_A           69 KSRTKEGTTLFFPLFQGGGN-DITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDEN---------EMIPLYKL  138 (186)
T ss_dssp             SCCCTTCCCTHHHHHHHCTT-CHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHH---------HHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHcCCc-chhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChh---------hHHHHHHH
Confidence            88999999999999987421 001236899999999999999987776 6666554411 000         01345677


Q ss_pred             HHh-hhccc----cccCCccceeccccccCc-hhhhhhhhc
Q 037827          228 LLH-WFVSF----RVSTTPLTLATNDVRLPH-SKIQYLHQY  262 (263)
Q Consensus       228 ~~~-~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~  262 (263)
                      |+. .|+|+    +.|+|||++|...   .+ .-++||-.|
T Consensus       139 Ll~~~gad~~~~d~~G~TpL~~A~~~---~~~~~v~~L~~~  176 (186)
T 3t8k_A          139 IFSQSGLQLLIKDKWGLTALEFVKRC---QKPIALKMMEDY  176 (186)
T ss_dssp             HHTSTTCCTTCCCTTSCCHHHHHHTT---TCHHHHHHHHHH
T ss_pred             HHHhcCCCCcccCCCCCCHHHHHHHc---CCHHHHHHHHHH
Confidence            888 89999    8899999999632   22 335666544

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.72  E-value=5.6e-18  Score=135.23  Aligned_cols=132  Identities=14%  Similarity=0.031  Sum_probs=103.5

Q ss_pred             HHHHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccc
Q 037827           73 FEFIVASTGKLELISTLIRY-EADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWA  151 (263)
Q Consensus        73 v~~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~  151 (263)
                      ..++||..|+.++++.|++. +.+ ++.+|..|+||||+ +..|+.+++++|++.|+                   .++.
T Consensus         5 ~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~-------------------~~~~   63 (156)
T 1bd8_A            5 RLSGAAARGDVQEVRRLLHRELVH-PDALNRFGKTALQV-MMFGSTAIALELLKQGA-------------------SPNV   63 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCC-TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC-------------------CTTC
T ss_pred             HHHHHHHhCCHHHHHHHHHhhCcC-ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC-------------------CCCC
Confidence            34589999999999999999 337 59999999999999 99999999999965433                   3567


Q ss_pred             ccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhh
Q 037827          152 EIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHW  231 (263)
Q Consensus       152 ~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      +|.+|.||||+|++.       ++.++++.|+..|++++..+..+.++.+.++...             ..++..+|+..
T Consensus        64 ~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~  123 (156)
T 1bd8_A           64 QDTSGTSPVHDAART-------GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG-------------HTAVVSFLAAE  123 (156)
T ss_dssp             CCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT-------------CHHHHHHHHTT
T ss_pred             cCCCCCCHHHHHHHc-------CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC-------------hHHHHHHHHhc
Confidence            788999999999987       6779999999999888877655444443333222             25556667766


Q ss_pred             hccc----cccCCccceec
Q 037827          232 FVSF----RVSTTPLTLAT  246 (263)
Q Consensus       232 ~~~~----~~~~~~~~~~~  246 (263)
                       +++    +.+.|||++|.
T Consensus       124 -~~~~~~~~~g~t~l~~A~  141 (156)
T 1bd8_A          124 -SDLHRRDARGLTPLELAL  141 (156)
T ss_dssp             -SCTTCCCTTSCCHHHHHH
T ss_pred             -cCCCCcCCCCCCHHHHHH
Confidence             777    78899999996

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.72  E-value=1e-19  Score=168.49  Aligned_cols=131  Identities=15%  Similarity=0.074  Sum_probs=101.4

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCC--CCCCCCcHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNV--RDEENLLPI  108 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~--~d~~G~TPL  108 (263)
                      +..+.||||.|+..|+.++|++|++. .++.....+...+.+..++||..|+.++|++|+++|+++ +.  +|..|+|||
T Consensus       125 ~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL  202 (376)
T 2aja_A          125 QAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAF  202 (376)
T ss_dssp             CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHH
Confidence            44578899999999999999999998 322100011111156777999999999999999999995 77  899999999


Q ss_pred             HHHH-HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          109 HRAA-KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       109 h~Aa-~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      |+|+ .+||.++|++|++.|+                          .|.||||+|+++       ++.++++.|+..|+
T Consensus       203 ~~Aa~~~G~~eiv~~Ll~~ga--------------------------~~~taL~~Aa~~-------g~~evv~lL~~~ga  249 (376)
T 2aja_A          203 RWAAVGRGHHNVINFLLDCPV--------------------------MLAYAEIHEFEY-------GEKYVNPFIARHVN  249 (376)
T ss_dssp             HHHHSTTCCHHHHHHHTTSHH--------------------------HHHHHHHCTTTT-------TTTTHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHhCCC--------------------------ccchHHHHHHHC-------CCHHHHHHHHhcCc
Confidence            9999 9999999999975321                          267888877776       56678888887777


Q ss_pred             CCCCCCCCC
Q 037827          188 PVQEEYNPH  196 (263)
Q Consensus       188 ~v~~~~~~~  196 (263)
                      +++..+++.
T Consensus       250 ~~~~~~~~l  258 (376)
T 2aja_A          250 RLKEMHDAF  258 (376)
T ss_dssp             HHHHHHTTT
T ss_pred             ccccccHHH
Confidence            776665555

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.72  E-value=8.5e-18  Score=132.08  Aligned_cols=103  Identities=23%  Similarity=0.104  Sum_probs=88.9

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW  150 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~  150 (263)
                      ....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++++                   ..++
T Consensus        15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------------~~~~   74 (136)
T 2jab_A           15 GKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNG-------------------ADVN   74 (136)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-------------------CCTT
T ss_pred             cHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-------------------CCCC
Confidence            55667999999999999999999995 999999999999999999999999996543                   3457


Q ss_pred             cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCC
Q 037827          151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAH  200 (263)
Q Consensus       151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~  200 (263)
                      .+|.+|.||||+|++.       ++.++++.|+..|++++..+..+.++.
T Consensus        75 ~~d~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~tpl  117 (136)
T 2jab_A           75 AVDAIGFTPLHLAAFI-------GHLEIAEVLLKHGADVNAQDKFGKTAF  117 (136)
T ss_dssp             CCCTTCCCHHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             cCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCcCcCCCCCCHH
Confidence            7899999999999997       678999999999999887765444433

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.71  E-value=2.1e-17  Score=126.29  Aligned_cols=124  Identities=25%  Similarity=0.193  Sum_probs=100.2

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW  150 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~  150 (263)
                      ....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++.+                   ..++
T Consensus         3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-------------------~~~~   62 (126)
T 1n0r_A            3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG-------------------ADVN   62 (126)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-------------------CCTT
T ss_pred             ccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-------------------CCCc
Confidence            44567999999999999999999995 999999999999999999999999997543                   3356


Q ss_pred             cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh
Q 037827          151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH  230 (263)
Q Consensus       151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                      .+|..|.||||+|++.       ++.++++.|+..|++++..+..+.++.+.++             .....++..+|+.
T Consensus        63 ~~~~~g~t~l~~A~~~-------~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~-------------~~~~~~~~~~Ll~  122 (126)
T 1n0r_A           63 AKDKNGRTPLHLAARN-------GHLEVVKLLLEAGADVNAKDKNGRTPLHLAA-------------RNGHLEVVKLLLE  122 (126)
T ss_dssp             CCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH-------------HTTCHHHHHHHHH
T ss_pred             ccCCCCCcHHHHHHHc-------ChHHHHHHHHHcCCCCcccCCCCCCHHHHHH-------------HcCcHHHHHHHHH
Confidence            7789999999999997       6789999999999988877654443332222             2223677788888


Q ss_pred             hhcc
Q 037827          231 WFVS  234 (263)
Q Consensus       231 ~~~~  234 (263)
                      .|||
T Consensus       123 ~Gad  126 (126)
T 1n0r_A          123 AGAY  126 (126)
T ss_dssp             HTCC
T ss_pred             cCCC
Confidence            8875

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.69  E-value=1.7e-16  Score=140.56  Aligned_cols=178  Identities=10%  Similarity=-0.080  Sum_probs=128.7

Q ss_pred             hhhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc------------------------CHH-----HH
Q 037827           25 DEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS------------------------SIF-----EF   75 (263)
Q Consensus        25 ~~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g------------------------~iv-----~~   75 (263)
                      .++...|..+.++++.+...|+....+.+-.. -+.....+.+...                        ...     .+
T Consensus        57 v~s~~~d~~~~~~l~~~~~~GN~~~n~i~e~~-l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~  135 (278)
T 1dcq_A           57 MQSLTLDVLGTSELLLAKNIGNAGFNEIMECC-LPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLC  135 (278)
T ss_dssp             EEETTTSCCCGGGGHHHHHSCHHHHHHHHTTT-CCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred             eeeeecCCCCHHHHHHHHHcCcHHHHHHHHhh-CChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence            33455677788899999999988776655332 1111100001100                        111     11


Q ss_pred             HHHhCCcHHHHHHHHHcCCCC-----CCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q 037827           76 IVASTGKLELISTLIRYEADL-----PNVRDEENLLPIHRAAKQ---GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPK  147 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l-----~~~~d~~G~TPLh~Aa~~---g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~  147 (263)
                      .|+..|+.+.++.+++.|+++     ++..|..|+||||+|+..   |+.++|++|++                  . +.
T Consensus       136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~------------------~-ga  196 (278)
T 1dcq_A          136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ------------------N-SG  196 (278)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH------------------H-CS
T ss_pred             hHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH------------------C-CC
Confidence            789999999999999999994     244589999999999999   89999999964                  3 33


Q ss_pred             ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHH
Q 037827          148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYL  227 (263)
Q Consensus       148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                      .++.+|.+|.||||+|+..       ++.++++.|+..|++++..+..+.+|.+.++...             ..++..+
T Consensus       197 ~in~~d~~g~TpLh~A~~~-------g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~-------------~~~~v~~  256 (278)
T 1dcq_A          197 NLDKQTGKGSTALHYCCLT-------DNAECLKLLLRGKASIEIANESGETPLDIAKRLK-------------HEHCEEL  256 (278)
T ss_dssp             CTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-------------CHHHHHH
T ss_pred             CccccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC-------------CHHHHHH
Confidence            4678899999999999997       7889999999999999988765555554333222             2567778


Q ss_pred             HHhhhccccccCCccceec
Q 037827          228 LLHWFVSFRVSTTPLTLAT  246 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~  246 (263)
                      |+..|+    ++||+|.+.
T Consensus       257 Ll~~ga----~~~~~~~~v  271 (278)
T 1dcq_A          257 LTQALS----GRFNSHVHV  271 (278)
T ss_dssp             HHHHHT----TCCCSSCCC
T ss_pred             HHHcCC----CCCCcceee
Confidence            888887    478888775

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.68  E-value=3.5e-17  Score=124.55  Aligned_cols=93  Identities=16%  Similarity=0.197  Sum_probs=53.4

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      .+|.+|+||||.|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~-d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl   79 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK--GADVNAR-SKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPE   79 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTT--TCCSSCC-CSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTT
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHH
Confidence            3456666666666666666666666655  2223222 333444455666666666666666666663 66666666666


Q ss_pred             HHHHHcCCHHHHHHHHh
Q 037827          109 HRAAKQGQRNVVCYLLE  125 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~  125 (263)
                      |+|+..|+.+++++|++
T Consensus        80 ~~A~~~~~~~~~~~Ll~   96 (115)
T 2l6b_A           80 HLAKKNGHHEIVKLLDA   96 (115)
T ss_dssp             HHHHTTTCHHHHHHHHT
T ss_pred             HHHHHCCCHHHHHHHHH
Confidence            66666666666666543

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.68  E-value=4.6e-17  Score=137.79  Aligned_cols=112  Identities=12%  Similarity=-0.007  Sum_probs=97.2

Q ss_pred             CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827           71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW  150 (263)
Q Consensus        71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~  150 (263)
                      ....++||..|+.+++++|++.|+++ +.+|..|+||||+||..|+.++|++|+.                  ..+..++
T Consensus        74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------------------~~g~~~~  134 (222)
T 3ehr_A           74 DNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFT------------------QPNIELN  134 (222)
T ss_dssp             SCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTT------------------STTCCCC
T ss_pred             ccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHc------------------CCCCCcc
Confidence            45667999999999999999999995 9999999999999999999999999964                  3345578


Q ss_pred             cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827          151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL  208 (263)
Q Consensus       151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  208 (263)
                      .+|.+|.||||+|++.       ++.++++.|+..|++++..+..+.++.+.++....
T Consensus       135 ~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~  185 (222)
T 3ehr_A          135 QQNKLGDTALHAAAWK-------GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC  185 (222)
T ss_dssp             CCCTTSCCHHHHHHHH-------TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH
T ss_pred             ccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH
Confidence            8899999999999997       77899999999999999988777666666665544

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.67  E-value=7.1e-17  Score=122.86  Aligned_cols=92  Identities=25%  Similarity=0.257  Sum_probs=79.4

Q ss_pred             cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------C
Q 037827           67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------L  131 (263)
Q Consensus        67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~  131 (263)
                      +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++++++               .
T Consensus         6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~   84 (115)
T 2l6b_A            6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK   84 (115)
T ss_dssp             SCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence            445677788999999999999999999995 999999999999999999999999999999862               6


Q ss_pred             CCCHHHHHHHHHhCCCccccccCCCchHH
Q 037827          132 DGSDDVAYGLLRKHPKLAWAEIAGTGKIL  160 (263)
Q Consensus       132 ~~~~~va~~Ll~~~~~~~~~~D~~G~TPL  160 (263)
                      .+..+++..|++. +..++.++..|.||=
T Consensus        85 ~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           85 NGHHEIVKLLDAK-GADVNARSWGSSHHH  112 (115)
T ss_dssp             TTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred             CCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence            7889999999876 455788899999883

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.66  E-value=7.7e-16  Score=117.01  Aligned_cols=94  Identities=14%  Similarity=0.094  Sum_probs=80.1

Q ss_pred             hhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           26 EKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        26 ~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      .....+.+|.++||.|+..|+.++++.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+
T Consensus        16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~   91 (110)
T 2zgd_A           16 RGSHMGSDLGKKLLEAARAGQDDEVRILMAN--GADVAAK-DKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGK   91 (110)
T ss_dssp             ------CCHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred             cccccCCccchHHHHHHHcCCHHHHHHHHHc--CCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCC
Confidence            3456788899999999999999999999987  3455444 566788889999999999999999999995 99999999


Q ss_pred             cHHHHHHHcCCHHHHHHH
Q 037827          106 LPIHRAAKQGQRNVVCYL  123 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~L  123 (263)
                      ||||+|+..|+.+++++|
T Consensus        92 tpl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           92 TAFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             CHHHHHHHHTCHHHHHHH
T ss_pred             cHHHHHHHcCCHHHHHHh
Confidence            999999999999999987

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.63  E-value=3.9e-16  Score=128.69  Aligned_cols=102  Identities=17%  Similarity=0.077  Sum_probs=86.9

Q ss_pred             cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827           70 SSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA  149 (263)
Q Consensus        70 g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~  149 (263)
                      |....++||..|+.++++.|++ |+++ +.+|..|+||||+|+..|+.++|++|+++|+                   .+
T Consensus        44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------------------~~  102 (183)
T 3deo_A           44 YETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGA-------------------DL  102 (183)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-------------------CT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------CC
Confidence            3566679999999999999999 9994 9999999999999999999999999965433                   34


Q ss_pred             cccc-CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCC
Q 037827          150 WAEI-AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHA  199 (263)
Q Consensus       150 ~~~D-~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~  199 (263)
                      +.+| .+|.||||+|+..       ++.++++.|+..|++++..+..+.++
T Consensus       103 ~~~~~~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~d~~g~tp  146 (183)
T 3deo_A          103 DHRDMRGGLTALHMAAGY-------VRPEVVEALVELGADIEVEDERGLTA  146 (183)
T ss_dssp             TCCCSSSSCCHHHHHHHT-------TCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred             CcCCCCCCCCHHHHHHhc-------CcHHHHHHHHHcCCCCcCCCCCCCCH
Confidence            5566 8999999999987       77899999999999988776544333

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.62  E-value=3.6e-16  Score=135.18  Aligned_cols=106  Identities=16%  Similarity=0.059  Sum_probs=90.2

Q ss_pred             cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827           70 SSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA  149 (263)
Q Consensus        70 g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~  149 (263)
                      |....++||..|+.++++.|++ |+++ +.+|..|+||||+|+..|+.++|++|+++|+                   .+
T Consensus        45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-------------------~~  103 (244)
T 3ui2_A           45 YETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGA-------------------DL  103 (244)
T ss_dssp             HHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-------------------CT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-------------------CC
Confidence            4566779999999999999999 9994 9999999999999999999999999975433                   35


Q ss_pred             cccc-CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCC
Q 037827          150 WAEI-AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSEN  203 (263)
Q Consensus       150 ~~~D-~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~  203 (263)
                      +.+| .+|.||||+|+++       ++.++++.|+..|++++..+..+.++.+.+
T Consensus       104 ~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A  151 (244)
T 3ui2_A          104 DHRDMRGGLTALHMAAGY-------VRPEVVEALVELGADIEVEDERGLTALELA  151 (244)
T ss_dssp             TCCCSSSCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             CcCCCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence            5566 7899999999997       778999999999999998876665555443

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.61  E-value=9.4e-16  Score=141.53  Aligned_cols=141  Identities=12%  Similarity=0.017  Sum_probs=97.6

Q ss_pred             HHHHHHHhC-CcHHHHHHHHHcCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q 037827           72 IFEFIVAST-GKLELISTLIRYEADLPNVRD--EENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKL  148 (263)
Q Consensus        72 iv~~~AA~~-G~~eiv~~Ll~~ga~l~~~~d--~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~  148 (263)
                      ...++|+.. |+.++++.|+++|+++ +..|  ..|+||||+|+..|+.++|++|+.+                   +..
T Consensus       201 t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-------------------Gad  260 (368)
T 3jue_A          201 ALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQN-------------------GAN  260 (368)
T ss_dssp             HHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------------------TCC
T ss_pred             cHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHc-------------------CCC
Confidence            455689999 9999999999999995 9998  8999999999999999999999643                   344


Q ss_pred             cccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHH
Q 037827          149 AWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLL  228 (263)
Q Consensus       149 ~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                      ++.+|.+|.||||+|+..       ++.++++.|+..|++++..+..+.++.+.++...             ..++..+|
T Consensus       261 vn~~d~~G~TpLh~A~~~-------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g-------------~~~iv~lL  320 (368)
T 3jue_A          261 VNQADSAGRGPLHHATIL-------GHTGLACLFLKRGADLGARDSEGRDPLTIAMETA-------------NADIVTLL  320 (368)
T ss_dssp             TTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-------------CHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHc-------CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCC-------------CHHHHHHH
Confidence            678899999999999987       6789999999999999888665544443332221             24556666


Q ss_pred             Hhhhccc-------cccCCccceeccccccC
Q 037827          229 LHWFVSF-------RVSTTPLTLATNDVRLP  252 (263)
Q Consensus       229 ~~~~~~~-------~~~~~~~~~~~~~~~~~  252 (263)
                      +..++.-       ..+.|||+++..-..+.
T Consensus       321 l~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~  351 (368)
T 3jue_A          321 RLAKMREAEAAQGQAGDETYLDIFRDFSLMA  351 (368)
T ss_dssp             HHHHC--------------------------
T ss_pred             HHcCCCcccccccCCCCCCHHHHHHHHHhhc
Confidence            6655332       66889999987443333

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.60  E-value=2.8e-15  Score=113.91  Aligned_cols=89  Identities=20%  Similarity=0.144  Sum_probs=76.7

Q ss_pred             cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827           67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP  146 (263)
Q Consensus        67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~  146 (263)
                      +.+|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++                   +
T Consensus        21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~-------------------g   80 (110)
T 2zgd_A           21 GSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEA-------------------G   80 (110)
T ss_dssp             -CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-------------------T
T ss_pred             CCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc-------------------C
Confidence            445567778999999999999999999995 99999999999999999999999999643                   3


Q ss_pred             CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHH
Q 037827          147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGL  182 (263)
Q Consensus       147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~l  182 (263)
                      ..++.+|.+|.||||+|++.       ++.++++.|
T Consensus        81 a~~~~~d~~g~tpl~~A~~~-------~~~~~~~~L  109 (110)
T 2zgd_A           81 ADVXAQDKFGKTAFDISIDN-------GNEDLAEIL  109 (110)
T ss_dssp             CCTTCCCTTSCCHHHHHHHH-------TCHHHHHHH
T ss_pred             CCccccccCCCcHHHHHHHc-------CCHHHHHHh
Confidence            34677899999999999987       667888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	263
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	0.002
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	0.001
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.004
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.004
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.004

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 4e-05
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 75  FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
            + +  G L ++  L++  A  PNV + +   P+H AA+ G   V  YLL+ 
Sbjct: 5   HVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQN 55

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
           A  G  E+   L++ +A   N + +++  P+H AA+ G  N+V  LLE 
Sbjct: 41  ARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMVKLLLEN 88

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 8/54 (14%), Positives = 16/54 (29%), Gaps = 1/54 (1%)

Query: 73  FEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
              +        ++  L++  AD P  R      P+  A  +    +   L   
Sbjct: 195 PLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAH 247

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 7/113 (6%)

Query: 17  NNKTPNTKDEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFI 76
              +        +    N +QV + L             +K   + A     +S +  F+
Sbjct: 40  MTLSYKEAIHIFLPGTKNMEQVRQLLC---LYYAHYNRNAKQLWSDAHKKGIKSEVICFV 96

Query: 77  VASTG---KLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
            A TG    L+ +  L+  +  +  V   EN      AA+ G  +V+  L E 
Sbjct: 97  AAITGCSSALDTLCLLLTSDEIV-KVIQAENYQAFRLAAENGHLHVLNRLCEL 148

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 78  ASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLE 125
           A  G++E++  LI+  A      D  +      A      N+V     
Sbjct: 229 AQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (83), Expect = 0.001
 Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 75  FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVV 120
              +  G L L+ TL+R  AD  ++++  N  P+  A  +   +++
Sbjct: 182 HSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDIL 226

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.004
 Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 81  GKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLE 125
            ++E    L+   A    + ++E   P+   AK G   ++  ++E
Sbjct: 180 ERVEEAKLLVSQGAS-IYIENKEEKTPLQ-VAKGGLGLILKRMVE 222

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 8/52 (15%), Positives = 18/52 (34%)

Query: 75  FIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK 126
            +      L L+  L+  E    N  D +    +  A +   + +   L ++
Sbjct: 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.004
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 7/80 (8%)

Query: 84  ELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLR 143
            +   L+ + AD  NVR E    P+  A ++    +V  LLE+    ++ +D        
Sbjct: 200 AITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS------D 252

Query: 144 KHPKLAWAEIAGTGKILELL 163
               L  A      KI ELL
Sbjct: 253 GKTALLLAVELKLKKIAELL 272

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	263
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.92
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.92
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.9
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.89
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.85
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.84
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.83
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.83
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.83
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.82
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.82
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.82
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.82
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.8
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.8
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.8
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.8
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.79
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.78
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.78
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.78
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.77
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.77
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.73
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.71
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.69
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.68
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.68
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.64
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.63
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.62
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.59
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.55

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.5e-25  Score=189.41  Aligned_cols=177  Identities=19%  Similarity=0.115  Sum_probs=119.0

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP  107 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP  107 (263)
                      ..+|.+|+||||+||..|+.++++.++.. . ...... ...+.....+|+..|+.+++++|+++|+++ +.+|.+|+||
T Consensus        31 ~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~-~~~d~~g~tp  106 (223)
T d1uoha_          31 TRTDQDSRTALHWACSAGHTEIVEFLLQL-G-VPVNDK-DDAGWSPLHIAASAGRDEIVKALLGKGAQV-NAVNQNGCTP  106 (223)
T ss_dssp             GCCCTTSCCHHHHHHHHTCHHHHHHHHHH-T-CCSCCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCH
T ss_pred             cCcCCCCCCHHHHHHHhhhhccccccccc-c-cccccc-cccccccccccccccccchhHHHhccCcee-EeeCCCCCch
Confidence            46788999999999999999999999987 2 222222 334456667899999999999999999995 9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827          108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~  187 (263)
                      ||+|+.+|+.+++++|+++|++                   ++.+|.+|.||||+|+..       +...+.+.|+..+.
T Consensus       107 L~~A~~~~~~e~~~~Ll~~g~d-------------------~~~~~~~~~t~L~~a~~~-------~~~~~~~~L~~~~~  160 (223)
T d1uoha_         107 LHYAASKNRHEIAVMLLEGGAN-------------------PDAKDHYEATAMHRAAAK-------GNLKMIHILLYYKA  160 (223)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCC-------------------TTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTC
T ss_pred             hhHHHHcCCHHHHHHHHHCCCC-------------------CCCcCCCCCccchhhhhc-------CCcchhhhhccccc
Confidence            9999999999999999876654                   233445555555555554       33445555555555


Q ss_pred             CCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceecc
Q 037827          188 PVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATN  247 (263)
Q Consensus       188 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  247 (263)
                      +++..+..+.++.+.++-...             .++..+|+..|||+    ++|+||||+|++
T Consensus       161 ~i~~~d~~g~TpL~~Aa~~g~-------------~~~v~~LL~~Gad~~~~d~~g~tpl~~A~~  211 (223)
T d1uoha_         161 STNIQDTEGNTPLHLACDEER-------------VEEAKLLVSQGASIYIENKEEKTPLQVAKG  211 (223)
T ss_dssp             CSCCCCTTCCCHHHHHHHTTC-------------HHHHHHHHHTTCCSCCCCTTSCCHHHHCCT
T ss_pred             eeeeccCCCCceeccccccCc-------------HHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
Confidence            544443322222222111111             23344444555555    567777777753

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=4e-25  Score=188.22  Aligned_cols=183  Identities=14%  Similarity=0.012  Sum_probs=146.3

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhcc-CCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSK-TPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~-~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      +++|.||||.||+.|+.++++.||+.+ ++..++.. +..|.+..++||..|+.+++++|+++|+++ +.+|.+|+||||
T Consensus         6 ~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~-~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i-~~~d~~g~tpL~   83 (255)
T d1oy3d_           6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALH   83 (255)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHH
T ss_pred             CcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCc-CCCCCCccchHHhhcccccccccccccccc-cccccccchhhh
Confidence            578999999999999999999999862 23334443 556678889999999999999999999995 999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCC-C----------------------------------------------------------
Q 037827          110 RAAKQGQRNVVCYLLEKTRA-P----------------------------------------------------------  130 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~-p----------------------------------------------------------  130 (263)
                      +|+..|+.+++++|++.... .                                                          
T Consensus        84 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh  163 (255)
T d1oy3d_          84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH  163 (255)
T ss_dssp             HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred             hhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCccccc
Confidence            99999999999999876642 0                                                          


Q ss_pred             ---CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChh
Q 037827          131 ---LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGD  207 (263)
Q Consensus       131 ---~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~  207 (263)
                         ..+..+++..|+..+......++..|.||||+|++.       ++.++++.|+..|++++..+..+.++.+-++.-.
T Consensus       164 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~-------~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~  236 (255)
T d1oy3d_         164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA-------QAASVLELLLKAGADPTARMYGGRTPLGSALLRP  236 (255)
T ss_dssp             HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred             ccccccccccccchhcccccccccccccccccccccccc-------cHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence               245677777888876665556678889999988886       6778999999999888887665555444333333


Q ss_pred             hhhhhccccccccchhhhHHHHhhhccc
Q 037827          208 LEKQLSETSHSAFGFELAYLLLHWFVSF  235 (263)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      .             .++..+|+..||+-
T Consensus       237 ~-------------~~i~~~Ll~~Ga~~  251 (255)
T d1oy3d_         237 N-------------PILARLLRAHGAPE  251 (255)
T ss_dssp             C-------------HHHHHHHHHTTCCC
T ss_pred             C-------------HHHHHHHHHcCCCC
Confidence            3             67788899999973

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.90  E-value=1.2e-23  Score=182.28  Aligned_cols=195  Identities=12%  Similarity=0.077  Sum_probs=152.9

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+.++.|+|+.||..|+++.|+.||++  +..++.. +..|.+..++|+..|+.++|++|+++|++. ...+..+.|||
T Consensus        35 ~~~~~~~t~l~~A~~~G~~~~v~~Ll~~--Gadvn~~-d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~-~~~~~~~~~~L  110 (291)
T d1s70b_          35 KVKFDDGAVFLAACSSGDTEEVLRLLER--GADINYA-NVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPL  110 (291)
T ss_dssp             CCEECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             ccCCCCchHHHHHHHcCCHHHHHHHHHC--CCCCCcc-CCCCCcHHHHHHhcCCceeeeeeccccccc-ccccccccccc
Confidence            3445678999999999999999999997  3455544 666788889999999999999999999994 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHh--------------------------CCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRK--------------------------HPK  147 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~--------------------------~~~  147 (263)
                      ++|+..|+.+++++|++++...               ..+..+.+..++..                          ...
T Consensus       111 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (291)
T d1s70b_         111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI  190 (291)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhccccc
Confidence            9999999999999999988751               22233333333322                          112


Q ss_pred             ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHH
Q 037827          148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYL  227 (263)
Q Consensus       148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                      .....+.+|.||||+|+..       ++.++++.|+..|++++..+..+.+|.+.++.             ....++..+
T Consensus       191 ~~~~~~~~g~t~L~~a~~~-------~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~-------------~g~~~iv~l  250 (291)
T d1s70b_         191 NDVRHAKSGGTALHVAAAK-------GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAH-------------WGKEEACRI  250 (291)
T ss_dssp             CCCCCTTTCCCHHHHHHHH-------TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH-------------TTCHHHHHH
T ss_pred             ccccccCCCCChhhHHHHc-------CChhhhcccccceecccccccCCCCHHHHHHH-------------cCCHHHHHH
Confidence            2334578999999999987       77899999999999998776555444433332             223777888


Q ss_pred             HHhhhccc----cccCCccceecc
Q 037827          228 LLHWFVSF----RVSTTPLTLATN  247 (263)
Q Consensus       228 ~~~~~~~~----~~~~~~~~~~~~  247 (263)
                      |+..|||+    +.|+|||++|..
T Consensus       251 Ll~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         251 LVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             HHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHH
Confidence            99999999    688999999973

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=4.1e-23  Score=172.86  Aligned_cols=188  Identities=16%  Similarity=0.066  Sum_probs=151.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCC---CCCCCCCcHHHHHH
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPN---VRDEENLLPIHRAA  112 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~---~~d~~G~TPLh~Aa  112 (263)
                      +|||+||+.|+.+.++.||.. .+..++.. +.+|.+..++|+..|+.+++++|+++|+++ +   ..|..|+||+|+|+
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~-~~~~~~~~-d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~   78 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHS-KPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENV-NLDDYPDDSGWTPFHIAC   78 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHH-CGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHTTCTTC-CGGGCCCTTSCCHHHHHH
T ss_pred             HhHHHHHHcCCHHHHHHHHHc-CCCccccc-CCCCCCHHHHHHHcCCccccchhhhhhccc-cccccccccccccccccc
Confidence            699999999999999999997 67766655 677888899999999999999999999984 5   56778999999999


Q ss_pred             HcCCHHHHHHHHhCCCCC-----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcc
Q 037827          113 KQGQRNVVCYLLEKTRAP-----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIR  175 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~p-----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~  175 (263)
                      ..+..++++.++..+...                 ..+..++...|+..+. ....+|.+|.||||+|+.+       ++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~t~l~~a~~~-------~~  150 (229)
T d1ixva_          79 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGA-SVRIKDKFNQIPLHRAASV-------GS  150 (229)
T ss_dssp             HHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHH-------TC
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcc-cccccCCCCCCccchhhhc-------cc
Confidence            999999999998887641                 4577888888887754 4577899999999999997       67


Q ss_pred             hHHHHHHcccC-CCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh-hhccc----cccCCccceecc
Q 037827          176 LGYWKGLLYQW-IPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH-WFVSF----RVSTTPLTLATN  247 (263)
Q Consensus       176 ~~~~~~li~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~  247 (263)
                      ..+++.|+..+ .+++..+..+.++.|.++....             .++...||. .|+|+    ++|+|||++|..
T Consensus       151 ~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~-------------~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~  215 (229)
T d1ixva_         151 LKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH-------------GDAAVLLVEKYGAEYDLVDNKGAKAEDVALN  215 (229)
T ss_dssp             HHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC-------------HHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC
T ss_pred             ccccccccccccccccccccccCCchhhhccccc-------------HHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh
Confidence            79999999876 4666665544444443332222             556677775 58998    788999999973

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.8e-22  Score=179.61  Aligned_cols=149  Identities=19%  Similarity=0.123  Sum_probs=128.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      ||||.||..|++++|+.|++.  +..++.. +..|....++||..|+.++|++|+++|+++ +.+|.+|+||||+|+..|
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~--g~~in~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi-~~~~~~g~t~L~~A~~~g   77 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQR--GASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIG   77 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT--TCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHT
T ss_pred             ChHHHHHHCcCHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcC
Confidence            899999999999999999987  4555554 566788889999999999999999999995 999999999999999999


Q ss_pred             CHHHHHHHHhCCCCC------------------------------------------------CCCCHHHHHHHHHhCCC
Q 037827          116 QRNVVCYLLEKTRAP------------------------------------------------LDGSDDVAYGLLRKHPK  147 (263)
Q Consensus       116 ~~evv~~Ll~~~a~p------------------------------------------------~~~~~~va~~Ll~~~~~  147 (263)
                      +.+++++|+....++                                                ..+..+++..|++.+ .
T Consensus        78 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~-~  156 (408)
T d1n11a_          78 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD-A  156 (408)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-C
T ss_pred             CHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcC-C
Confidence            999999999876641                                                345677888888774 4


Q ss_pred             ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC
Q 037827          148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH  196 (263)
Q Consensus       148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~  196 (263)
                      .++..+.+|.||||+|++.       ++.++++.|+..|++++..+..+
T Consensus       157 ~~~~~~~~~~~~L~~A~~~-------~~~~~~~~Ll~~g~~~~~~~~~~  198 (408)
T d1n11a_         157 HPNAAGKNGLTPLHVAVHH-------NNLDIVKLLLPRGGSPHSPAWNG  198 (408)
T ss_dssp             CTTCCCSSCCCHHHHHHHT-------TCHHHHHHHGGGTCCSCCCCTTC
T ss_pred             CCCcCCCcCchHHHHHHHc-------CCHHHHHHHHhcCCcccccCCCC
Confidence            5678899999999999987       67899999999999888776443

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.9e-22  Score=166.67  Aligned_cols=180  Identities=14%  Similarity=0.022  Sum_probs=145.7

Q ss_pred             cChHHHHHHHHcCCHHHHHHHHhc--cCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827           33 ANYKQVTRYLLEDDWKGLEDYIMS--KTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR  110 (263)
Q Consensus        33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~--~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~  110 (263)
                      +|+||||+|+..|+.+.+..+++.  .++..++.. +..|.+..++||..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~-d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~-~~~d~~g~t~l~~   78 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHL   78 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccC-CCCCCccccccccccccccccccccccccc-ccccccccccccc
Confidence            589999999999998776665542  034556555 567789999999999999999999999995 9999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCC---------------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCC
Q 037827          111 AAKQGQRNVVCYLLEKTRAP---------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKA  169 (263)
Q Consensus       111 Aa~~g~~evv~~Ll~~~a~p---------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~  169 (263)
                      |+..|+.+++++|+..+...                     ..+..+++..++..+.......+.+|.||||+|++.   
T Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~---  155 (221)
T d1iknd_          79 ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL---  155 (221)
T ss_dssp             HHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT---
T ss_pred             ccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccccc---
Confidence            99999999999999887641                     456777888888886665555678899999999997   


Q ss_pred             CcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhcc
Q 037827          170 FASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVS  234 (263)
Q Consensus       170 f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                          ++.++++.|+..|++++..+..+.+|.+.++....             .+++.+|+....+
T Consensus       156 ----g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~-------------~~~~~~l~~~~~~  203 (221)
T d1iknd_         156 ----QNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS-------------TRIQQQLGQLTLE  203 (221)
T ss_dssp             ----TCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC-------------HHHHHHHHTTSCG
T ss_pred             ----ccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCCC-------------HHHHHHHHHcCCc
Confidence                78899999999999999998777777777665554             5556666665544

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.9e-21  Score=173.70  Aligned_cols=206  Identities=17%  Similarity=0.142  Sum_probs=140.2

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc-------------CHH----------------------
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS-------------SIF----------------------   73 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g-------------~iv----------------------   73 (263)
                      ..|..|+||||.|+..|+.++|+.||++  +..++.. +..|             +++                      
T Consensus        28 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~--gadi~~~-~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~  104 (408)
T d1n11a_          28 VSNVKVETPLHMAARAGHTEVAKYLLQN--KAKVNAK-AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLH  104 (408)
T ss_dssp             CSSSCCCCHHHHHHHHTCHHHHHHHHHH--TCCSSCC-CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHH
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHhhhccccccccccchhh
Confidence            4577899999999999999999999987  2333333 2222             000                      


Q ss_pred             -------------------------------HHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 037827           74 -------------------------------EFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCY  122 (263)
Q Consensus        74 -------------------------------~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~  122 (263)
                                                     ..+|+..|+.+++++|+++|+++ +..+.+|.+|||+|+..|+.+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~-~~~~~~~~~~L~~A~~~~~~~~~~~  183 (408)
T d1n11a_         105 IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKL  183 (408)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHH
T ss_pred             hhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCcCchHHHHHHHcCCHHHHHH
Confidence                                           01888999999999999999994 9999999999999999999999999


Q ss_pred             HHhCCCCC------------------------------------------------CCCCHHHHHHHHHhCCCccccccC
Q 037827          123 LLEKTRAP------------------------------------------------LDGSDDVAYGLLRKHPKLAWAEIA  154 (263)
Q Consensus       123 Ll~~~a~p------------------------------------------------~~~~~~va~~Ll~~~~~~~~~~D~  154 (263)
                      |+.+|+++                                                ..+..+++..++.. ....+..|.
T Consensus       184 Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~-~~~~~~~~~  262 (408)
T d1n11a_         184 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNK  262 (408)
T ss_dssp             HGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCT
T ss_pred             HHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHHhCcHhHhhhhhcc-ccccccccC
Confidence            99988752                                                11223333333333 333455577


Q ss_pred             CCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCC----------------CCChh--hhhhhcccc
Q 037827          155 GTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSE----------------NVDGD--LEKQLSETS  216 (263)
Q Consensus       155 ~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~----------------~~~~~--~~~~~~~~~  216 (263)
                      .|.|||+.|++.       ++.++++.|+..|++++..+....++.+.                +++-+  +..+-+.+.
T Consensus       263 ~g~~~l~~a~~~-------~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh  335 (408)
T d1n11a_         263 SGLTPLHLVAQE-------GHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLH  335 (408)
T ss_dssp             TCCCHHHHHHHH-------TCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             CCCChhhhhhhc-------CcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHH
Confidence            777777777776       56688888888777777665433222110                11111  122222333


Q ss_pred             ccccc--hhhhHHHHhhhccc----cccCCccceec
Q 037827          217 HSAFG--FELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       217 ~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      +++..  .++..+||..|||.    +.|+|||++|.
T Consensus       336 ~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~  371 (408)
T d1n11a_         336 QAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK  371 (408)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            33333  55666788899998    78999999995

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.3e-20  Score=149.02  Aligned_cols=139  Identities=14%  Similarity=0.066  Sum_probs=122.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      ++||.||..|+.++|+.|+++  +..++.. +..|.+..++|+ .|+.+++++|+++|+++ +.++..|.|||+.++..+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~--g~d~n~~-d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~-~~~~~~~~~~l~~~~~~~   77 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQN--NVNVNAQ-NGFGRTALQVMK-LGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAG   77 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTS--CCCTTCC-CTTSCCHHHHCC-SSCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHC--CCCcCcc-CCcccccccccc-ccccccccccccccccc-ccccccCccccccccccc
Confidence            799999999999999999997  3445554 666777777665 79999999999999994 999999999999999999


Q ss_pred             CHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHH
Q 037827          116 QRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWK  180 (263)
Q Consensus       116 ~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~  180 (263)
                      +.+++++|+..+.+.               ..+..+++..|+.+++...+.+|.+|.||||+|+++       ++.++++
T Consensus        78 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~-------~~~~iv~  150 (156)
T d1ihba_          78 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY-------GRNEVVS  150 (156)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT-------TCHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHc-------CCHHHHH
Confidence            999999999988751               577889999999998877889999999999999998       7789999


Q ss_pred             HHcccC
Q 037827          181 GLLYQW  186 (263)
Q Consensus       181 ~li~~~  186 (263)
                      .|+.+|
T Consensus       151 ~Ll~~G  156 (156)
T d1ihba_         151 LMQANG  156 (156)
T ss_dssp             HHHHTC
T ss_pred             HHHhcC
Confidence            998775

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2e-20  Score=152.33  Aligned_cols=193  Identities=12%  Similarity=0.033  Sum_probs=145.0

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhc--cCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMS--KTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH  109 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~--~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh  109 (263)
                      ++|.||||.||..|++++|+.|++.  ..+..++.. +..|.+..++||..|+.+++++|+++|++. +..+..|.+|++
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~-d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~~~~   78 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAH   78 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCcc-CCCCCccceehhcccccccccccccccccc-cccccccccccc
Confidence            3699999999999999999999862  034455444 566788889999999999999999999995 999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCC-------------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCC
Q 037827          110 RAAKQGQRNVVCYLLEKTRAP-------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAF  170 (263)
Q Consensus       110 ~Aa~~g~~evv~~Ll~~~a~p-------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f  170 (263)
                      .|...++.++++.+.......                   ..........+...........+..|.+||+.|++.    
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~----  154 (228)
T d1k1aa_          79 LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN----  154 (228)
T ss_dssp             HHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT----
T ss_pred             cccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHh----
Confidence            999999999999887654430                   123344445555555555555678899999999987    


Q ss_pred             cCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          171 ASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       171 ~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                         +...+++.++..+..++..+.-+.++.+.++.             -...++..+|+..|||.    .+|.|||++|.
T Consensus       155 ---~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~-------------~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~  218 (228)
T d1k1aa_         155 ---NSLSMVQLLLQHGANVNAQMYSGSSALHSASG-------------RGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR  218 (228)
T ss_dssp             ---TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH-------------HTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCS
T ss_pred             ---hhhhhhhhhhhhccccccccccCcchHHHHHH-------------cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence               56688888888887766654433333222221             11255667788889887    78999999995

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=2.3e-20  Score=158.34  Aligned_cols=150  Identities=11%  Similarity=-0.013  Sum_probs=124.7

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC-----------
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL-----------   96 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l-----------   96 (263)
                      ..++..|.||||+|+..|+.++++.|++.  +..++.. +..|....++|+..|+.+++++|++.+...           
T Consensus        39 ~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~i~~~-d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~  115 (255)
T d1oy3d_          39 DLQNDLGQTALHLAAILGEASTVEKLYAA--GAGVLVA-ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ  115 (255)
T ss_dssp             GCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCC-CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred             cCcCCCCCCccchHHhhcccccccccccc--ccccccc-ccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhH
Confidence            45677899999999999999999999987  3445444 566777888999999999999987653210           


Q ss_pred             -----------------------------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------
Q 037827           97 -----------------------------------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP-----------  130 (263)
Q Consensus        97 -----------------------------------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p-----------  130 (263)
                                                         ++.+|..|+||||+||..|+.++|++|++.++++           
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~Tp  195 (255)
T d1oy3d_         116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP  195 (255)
T ss_dssp             ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred             HhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhccccccccccccccccc
Confidence                                               2567888999999999999999999999988751           


Q ss_pred             -----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827          131 -----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP  188 (263)
Q Consensus       131 -----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~  188 (263)
                           ..++.+++..|++. +..++.+|.+|.||||+|+++       ++.++++.|+.+|++
T Consensus       196 L~~A~~~~~~~~v~~Ll~~-gadin~~d~~g~t~L~~A~~~-------~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         196 LHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLR-------PNPILARLLRAHGAP  250 (255)
T ss_dssp             HHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTS-------SCHHHHHHHHHTTCC
T ss_pred             ccccccccHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHC-------CCHHHHHHHHHcCCC
Confidence                 45778888888876 566789999999999999998       678999999999985

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.83  E-value=1.6e-21  Score=166.87  Aligned_cols=159  Identities=14%  Similarity=0.105  Sum_probs=132.5

Q ss_pred             ccChHHHHHHHHcCCHHHHHHHHhcc------CCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827           32 IANYKQVTRYLLEDDWKGLEDYIMSK------TPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL  105 (263)
Q Consensus        32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~------~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~  105 (263)
                      .+|+||||+||..|+.++|+.|+...      .+..++.+ +..|.+..++|+..|+.++|++|+++|++ ++.+|.+|+
T Consensus        31 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~-d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad-~n~~~~~g~  108 (277)
T d2fo1e1          31 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM-DCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSER  108 (277)
T ss_dssp             SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCC
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCcccc-CCCCCeeeccccccccccccccccccccc-ccccccccc
Confidence            46999999999999999998886540      23456555 66788999999999999999999999999 599999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCC-------------C------------------------------------------
Q 037827          106 LPIHRAAKQGQRNVVCYLLEKTRA-------------P------------------------------------------  130 (263)
Q Consensus       106 TPLh~Aa~~g~~evv~~Ll~~~a~-------------p------------------------------------------  130 (263)
                      |||++|+..|+.++++++...+..             +                                          
T Consensus       109 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  188 (277)
T d2fo1e1         109 SALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR  188 (277)
T ss_dssp             CHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCC
T ss_pred             ccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCC
Confidence            999999999999999998765321             0                                          


Q ss_pred             -------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCC
Q 037827          131 -------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHA  199 (263)
Q Consensus       131 -------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~  199 (263)
                             ..++.++...++...+...+.+|..|.||||+|++.       ++.++++.|+..|++++..+.-+.++
T Consensus       189 t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~-------g~~~iv~~Ll~~gadin~~d~~G~T~  257 (277)
T d2fo1e1         189 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE-------GRIEVVMYLIQQGASVEAVDATDHTA  257 (277)
T ss_dssp             CTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH-------TCHHHHHHHHHTTCCSSCCCSSSCCH
T ss_pred             CccccccccccccccccccccccccccccCCCCCCHHHHHHHc-------CCHHHHHHHHHCcCCCCCcCCCCCCH
Confidence                   355667777777777777788999999999999997       67899999999999998876544443

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=8.8e-20  Score=152.25  Aligned_cols=182  Identities=14%  Similarity=-0.053  Sum_probs=135.4

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCccc--ccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC-CCCCCCCC
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALA--CIIVDQSSIFEFIVASTGKLELISTLIRYEADL-PNVRDEEN  104 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~--~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l-~~~~d~~G  104 (263)
                      ..+|.+|+||||+|+..|+.++++.||+.+  ..++  ...+..|....++|+..+..++++.++..+... ....+..+
T Consensus        28 ~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (229)
T d1ixva_          28 LQKDQDGRIPLHWSVSFQAHEITSFLLSKM--ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG  105 (229)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHTTC--TTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTS
T ss_pred             cccCCCCCCHHHHHHHcCCccccchhhhhh--cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            357889999999999999999999999872  2222  122444555666777777777777777666542 24456667


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCC
Q 037827          105 LLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKA  169 (263)
Q Consensus       105 ~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~  169 (263)
                      .|||+.++..++.+++++|+..+.+.               ..+..+++..|++..+..++.+|.+|.||||+|+++   
T Consensus       106 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~---  182 (229)
T d1ixva_         106 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE---  182 (229)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT---
T ss_pred             ccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhccc---
Confidence            77777777777777777777766641               345566666777777677888999999999999997   


Q ss_pred             CcCCcchHHHHHHcc-cCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhcc
Q 037827          170 FASGIRLGYWKGLLY-QWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVS  234 (263)
Q Consensus       170 f~s~~~~~~~~~li~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                          ++.++++.|+. .|++++..+..+.++.+-+++.+                +..+|+..|+|
T Consensus       183 ----~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~~~----------------~~~~Ll~~g~d  228 (229)
T d1ixva_         183 ----GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ----------------VKKFFLNNVVD  228 (229)
T ss_dssp             ----TCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSCHH----------------HHHHHHHHCCC
T ss_pred             ----ccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhhHH----------------HHHHHHHcCCC
Confidence                67899999996 59999999887777877777543                35677878876

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=2.3e-21  Score=148.83  Aligned_cols=108  Identities=21%  Similarity=0.239  Sum_probs=93.9

Q ss_pred             hHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q 037827           35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ  114 (263)
Q Consensus        35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~  114 (263)
                      -|||++|++.|+.++|+.|++.  +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+.+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~--g~d~n~~-~~~g~t~lh~A~~~~~~~~~~~ll~~g~di-n~~d~~g~tpLh~A~~~   78 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAK--GEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYE   78 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTT--TCCCCCC-SSSSCCTTHHHHHHSTTTHHHHHHHSSCTT-TCCSSSCSCHHHHHHTT
T ss_pred             ChHHHHHHHCCCHHHHHHHHHh--hhccccc-ccccccccccccccccccccccccccccee-eecccccccchhhhhhc
Confidence            3799999999999999999987  3445444 556777888999999999999999999995 99999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827          115 GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK  165 (263)
Q Consensus       115 g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~  165 (263)
                      |+.++|++|+++|                   ..++.+|.+|.||||+|..
T Consensus        79 ~~~~~v~~Ll~~G-------------------ad~~~~d~~G~t~l~~a~~  110 (118)
T d1myoa_          79 GHVSCVKLLLSKG-------------------ADKTVKGPDGLTALEATDN  110 (118)
T ss_dssp             TCCHHHHHHHTTC-------------------CCSSSSSSSTCCCCCTCSS
T ss_pred             Cchhhhhhhhccc-------------------ccceeeCCCCCCHHHHHhH
Confidence            9999999996433                   3467889999999998754

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-20  Score=158.91  Aligned_cols=170  Identities=20%  Similarity=0.158  Sum_probs=136.5

Q ss_pred             hHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q 037827           35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ  114 (263)
Q Consensus        35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~  114 (263)
                      .+.|+.+|.+|+++.|+.+|.. ++..++.+ +..|.+..++||..|+.+++++|+..+.+. ...+..+.++++.|+..
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~-~~~~~~~~-D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILA-DKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASA   80 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHH-CGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHh-CCCcCcCc-CCCCCCHHHHHHHhhhhccccccccccccc-ccccccccccccccccc
Confidence            3578889999999999999988 67777665 667788899999999999999999999985 88888999999999999


Q ss_pred             CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCC
Q 037827          115 GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYN  194 (263)
Q Consensus       115 g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~  194 (263)
                      |+.+++++|++++                   ..++.+|.+|.||||+|+.+       ++.++++.|+..|++++..+.
T Consensus        81 ~~~~i~~~Ll~~~-------------------~d~~~~d~~g~tpL~~A~~~-------~~~e~~~~Ll~~g~d~~~~~~  134 (223)
T d1uoha_          81 GRDEIVKALLGKG-------------------AQVNAVNQNGCTPLHYAASK-------NRHEIAVMLLEGGANPDAKDH  134 (223)
T ss_dssp             TCHHHHHHHHHTT-------------------CCTTCCCTTCCCHHHHHHHH-------TCHHHHHHHHHTTCCTTCCCT
T ss_pred             cccchhHHHhccC-------------------ceeEeeCCCCCchhhHHHHc-------CCHHHHHHHHHCCCCCCCcCC
Confidence            9999999996543                   33567899999999999987       677999999999998887754


Q ss_pred             CCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          195 PHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      .+.++.+.++..             -.-+...+|+.+++|+    ..+.|||++|.
T Consensus       135 ~~~t~L~~a~~~-------------~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa  177 (223)
T d1uoha_         135 YEATAMHRAAAK-------------GNLKMIHILLYYKASTNIQDTEGNTPLHLAC  177 (223)
T ss_dssp             TSCCHHHHHHHT-------------TCHHHHHHHHHTTCCSCCCCTTCCCHHHHHH
T ss_pred             CCCccchhhhhc-------------CCcchhhhhccccceeeeccCCCCceecccc
Confidence            443333211111             1134456677888888    88999999995

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.1e-20  Score=146.22  Aligned_cols=120  Identities=13%  Similarity=0.000  Sum_probs=99.1

Q ss_pred             ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC-cHHHHHH
Q 037827           34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL-LPIHRAA  112 (263)
Q Consensus        34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~-TPLh~Aa  112 (263)
                      +.++||.|+..|++++|+.|++.  +..++.. +..|....+ +|..|+.+++++|+++|+++ +.+|..|. ||||+|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~--gad~n~~-~~~g~t~l~-~a~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~L~~A~   77 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEA--GANPNAP-NSYGRRPIQ-VMMMGSARVAELLLLHGAEP-NCADPATLTRPVHDAA   77 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTT--TCCTTCC-CSSSCCTTT-SSCTTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHH
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHc--CCccccc-ccccccccc-cccccccccccccccccccc-cccccccccccccccc
Confidence            46789999999999999999987  3444444 444544444 55689999999999999995 99999876 6999999


Q ss_pred             HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcc
Q 037827          113 KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLY  184 (263)
Q Consensus       113 ~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~  184 (263)
                      ..|+.++|++|++                  . +..++.+|.+|.||||+|+++       ++.++++.|+.
T Consensus        78 ~~g~~~~v~~Ll~------------------~-ga~~~~~d~~G~T~l~~A~~~-------g~~~~v~~Lls  123 (125)
T d1bi7b_          78 REGFLDTLVVLHR------------------A-GARLDVRDAWGRLPVDLAEEL-------GHRDVARYLRA  123 (125)
T ss_dssp             HHTCHHHHHHHHH------------------H-TCCSSCCCTTCCCHHHHHHHH-------TCHHHHHHHSS
T ss_pred             ccccccccccccc------------------c-ccccccccCCCCCHHHHHHHc-------CCHHHHHHHHh
Confidence            9999999999964                  3 334678899999999999997       78899998875

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=8e-20  Score=156.67  Aligned_cols=139  Identities=12%  Similarity=-0.052  Sum_probs=113.4

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHH---H-HHhCCcHHHHHHHHHcCCCCCCCCCCC
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEF---I-VASTGKLELISTLIRYEADLPNVRDEE  103 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~---~-AA~~G~~eiv~~Ll~~ga~l~~~~d~~  103 (263)
                      ...+..|.||||.|++.|+.++++.|+++ .+..++.. +..+.....   + +...+..+++++|+++|+++ +.+|..
T Consensus       142 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~-n~~~~~  218 (285)
T d1wdya_         142 ERLRKGGATALMDAAEKGHVEVLKILLDE-MGADVNAC-DNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGER  218 (285)
T ss_dssp             HHTTCCCCCHHHHHHHHTCHHHHHHHHHT-SCCCTTCC-CTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTT
T ss_pred             hhhcccCchHHHHHHHcCCHHHHHHHHhc-cCCCcccc-cCCCCcccccccccccchHHHHHHHHHHHCCCCC-CccCCC
Confidence            34566789999999999999999999987 55555444 333322222   3 34445567999999999995 999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827          104 NLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL  183 (263)
Q Consensus       104 G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li  183 (263)
                      |.||||+|+..|+.++|++|+                  ..++..++.+|.+|.||||+|+++       ++.++++.|+
T Consensus       219 g~t~L~~a~~~~~~~~v~~lL------------------~~~g~din~~d~~G~TpL~~A~~~-------~~~eiv~~Ll  273 (285)
T d1wdya_         219 GKTPLILAVEKKHLGLVQRLL------------------EQEHIEINDTDSDGKTALLLAVEL-------KLKKIAELLC  273 (285)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHH------------------HSSSCCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHH
T ss_pred             CCCccchhhhcCcHHHHHHHH------------------HcCCCCCcCCCCCCCCHHHHHHHc-------CCHHHHHHHH
Confidence            999999999999999999995                  445566788999999999999998       7889999999


Q ss_pred             ccCCCCCCCCC
Q 037827          184 YQWIPVQEEYN  194 (263)
Q Consensus       184 ~~~~~v~~~~~  194 (263)
                      ..|+++|..++
T Consensus       274 ~~GAd~n~~d~  284 (285)
T d1wdya_         274 KRGASTDCGDL  284 (285)
T ss_dssp             HHSSCSCCSSC
T ss_pred             HCCCCCCcccC
Confidence            99999998864

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.1e-19  Score=152.95  Aligned_cols=182  Identities=16%  Similarity=0.081  Sum_probs=129.4

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc--------------------------------CHHHHHHH
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS--------------------------------SIFEFIVA   78 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g--------------------------------~iv~~~AA   78 (263)
                      +..|+||||+|+..|+.++++.|++. ..... .......                                ....++|+
T Consensus        36 ~~~g~tpL~~A~~~~~~eiv~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~  113 (285)
T d1wdya_          36 EEGGWTPLHNAVQMSREDIVELLLRH-GADPV-LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAA  113 (285)
T ss_dssp             TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHhhhhccc-ccccc-ccccccchhhHHHhhcCCccccchhhhhcccccccccCCCchhHHHH
Confidence            34688888888888888888888876 22221 1111111                                01111788


Q ss_pred             hCCcHHHHHHHHHcCCCCCCCC----------CCCCCcHHHHHHHcCCHHHHHHHHhC-CCCC-----------------
Q 037827           79 STGKLELISTLIRYEADLPNVR----------DEENLLPIHRAAKQGQRNVVCYLLEK-TRAP-----------------  130 (263)
Q Consensus        79 ~~G~~eiv~~Ll~~ga~l~~~~----------d~~G~TPLh~Aa~~g~~evv~~Ll~~-~a~p-----------------  130 (263)
                      ..|+..+++.++....++ +.+          +..|.||||+|+.+|+.+++++|+++ ++++                 
T Consensus       114 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~  192 (285)
T d1wdya_         114 VYGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS  192 (285)
T ss_dssp             HTTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred             Hhcchhhhhhhhhhcccc-cccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCccccccccc
Confidence            888999888888877663 433          34499999999999999999999975 4441                 


Q ss_pred             --CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcc-cCCCCCCCCCCCCCCCCCCCChh
Q 037827          131 --LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLY-QWIPVQEEYNPHAHAHSENVDGD  207 (263)
Q Consensus       131 --~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~-~~~~v~~~~~~~~~~~~~~~~~~  207 (263)
                        ..+...++..|++. +..++.+|.+|.||||.|++.       ++.++++.|+. .|++|+..+.-+.+|.+.++.-.
T Consensus       193 ~~~~~~~~i~~~Li~~-ga~~n~~~~~g~t~L~~a~~~-------~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~  264 (285)
T d1wdya_         193 SDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEK-------KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK  264 (285)
T ss_dssp             SCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHT-------TCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred             ccchHHHHHHHHHHHC-CCCCCccCCCCCCccchhhhc-------CcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence              23344577778876 445788899999999999997       67899999986 58898887655554444333222


Q ss_pred             hhhhhccccccccchhhhHHHHhhhcccc
Q 037827          208 LEKQLSETSHSAFGFELAYLLLHWFVSFR  236 (263)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                                   ..++..+||..|||..
T Consensus       265 -------------~~eiv~~Ll~~GAd~n  280 (285)
T d1wdya_         265 -------------LKKIAELLCKRGASTD  280 (285)
T ss_dssp             -------------CHHHHHHHHHHSSCSC
T ss_pred             -------------CHHHHHHHHHCCCCCC
Confidence                         2677888999999973

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=1.2e-19  Score=139.14  Aligned_cols=106  Identities=19%  Similarity=0.040  Sum_probs=93.3

Q ss_pred             HHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc
Q 037827           74 EFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI  153 (263)
Q Consensus        74 ~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D  153 (263)
                      ..||+..|+.++|++|+++|+++ +.+|..|+||||+|+..|+.+++++|+.+|+                   .++.+|
T Consensus         6 L~~A~~~g~~~~v~~Ll~~g~d~-n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~-------------------din~~d   65 (118)
T d1myoa_           6 FMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGA-------------------DINAPD   65 (118)
T ss_dssp             HHHHHHTTCHHHHHHHHTTTCCC-CCCSSSSCCTTHHHHHHSTTTHHHHHHHSSC-------------------TTTCCS
T ss_pred             HHHHHHCCCHHHHHHHHHhhhcc-ccccccccccccccccccccccccccccccc-------------------eeeecc
Confidence            44899999999999999999994 9999999999999999999999999965433                   367789


Q ss_pred             CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCCh
Q 037827          154 AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDG  206 (263)
Q Consensus       154 ~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~  206 (263)
                      .+|.||||+|+++       ++.++++.|+..|++++..+..+.++.+.+..+
T Consensus        66 ~~g~tpLh~A~~~-------~~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~~~  111 (118)
T d1myoa_          66 KHHITPLLSAVYE-------GHVSCVKLLLSKGADKTVKGPDGLTALEATDNQ  111 (118)
T ss_dssp             SSCSCHHHHHHTT-------TCCHHHHHHHTTCCCSSSSSSSTCCCCCTCSST
T ss_pred             cccccchhhhhhc-------CchhhhhhhhcccccceeeCCCCCCHHHHHhHH
Confidence            9999999999997       677999999999999999988777777766443

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.80  E-value=7.9e-22  Score=168.74  Aligned_cols=186  Identities=16%  Similarity=0.071  Sum_probs=125.5

Q ss_pred             HHHHHHHHc-CCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHH--------HHcCCCCCCCCCCCCCc
Q 037827           36 KQVTRYLLE-DDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTL--------IRYEADLPNVRDEENLL  106 (263)
Q Consensus        36 t~Lh~Aa~~-G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~L--------l~~ga~l~~~~d~~G~T  106 (263)
                      ||||.++.. |..++++.|.+.    .++...++.|.++.++||..|+.++|++|        ++.|+++ +.+|.+|+|
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~----~~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadv-n~~d~~G~T   76 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRE----SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDENT   76 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTT----TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTSCC
T ss_pred             ChHHHHHHhCCCHHHHHHHHhc----CCCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCc-cccCCCCCe
Confidence            577866555 555555444444    23233334578999999999999999877        5679995 999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhC--------------------------
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKH--------------------------  145 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~--------------------------  145 (263)
                      |||+|+..|+.++|++|+++|+++               ..+..++...+....                          
T Consensus        77 pLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (277)
T d2fo1e1          77 PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGR  156 (277)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCST
T ss_pred             eeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccc
Confidence            999999999999999999999973               233444333321110                          


Q ss_pred             -------------C-------CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc-ccCCCCCCCCCCCCCCCCCCC
Q 037827          146 -------------P-------KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL-YQWIPVQEEYNPHAHAHSENV  204 (263)
Q Consensus       146 -------------~-------~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li-~~~~~v~~~~~~~~~~~~~~~  204 (263)
                                   .       ......+.+|.||||+++..       ++..+.+.++ ..+.+++..+..+.++.+.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~-------~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~  229 (277)
T d2fo1e1         157 DQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQV-------SNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA  229 (277)
T ss_dssp             THHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSS-------CCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCCcccccccc-------ccccccccccccccccccccCCCCCCHHHHHH
Confidence                         0       00111256788888888876       5566776544 455566555444433333222


Q ss_pred             ChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          205 DGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      .             .-..++..+|+..|||+    +.|.||||+|.
T Consensus       230 ~-------------~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~  262 (277)
T d2fo1e1         230 Q-------------EGRIEVVMYLIQQGASVEAVDATDHTARQLAQ  262 (277)
T ss_dssp             H-------------HTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHH
T ss_pred             H-------------cCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHH
Confidence            2             22266788889999999    88999999995

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.2e-19  Score=140.66  Aligned_cols=137  Identities=17%  Similarity=0.091  Sum_probs=105.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      ..|+.||..|++++|+.||.+ .+..++.. +..|....++|+ .|+.+++++|+++++++ +.++..|.+||+.|+..+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~-~~~~~n~~-d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~-~~~~~~~~~~l~~~~~~~   79 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHR-ELVHPDAL-NRFGKTALQVMM-FGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHT-TCCCTTCC-CTTSCCHHHHSC-TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHHcCCHHHHHHHHHh-CCCCCCcc-CCCCCccccccc-ccccccccccccccccc-cccccccccccccccccc
Confidence            358888888888888888876 55555444 555666666655 57788888888888884 888888888888888888


Q ss_pred             CHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHH
Q 037827          116 QRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWK  180 (263)
Q Consensus       116 ~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~  180 (263)
                      +.+++++++++++++               ..++.+++..|+ .+ ..++.+|.+|.||||+|+++       ++.++++
T Consensus        80 ~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~-~~~~~~d~~G~TpL~~A~~~-------g~~~iv~  150 (156)
T d1bd8a_          80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AE-SDLHRRDARGLTPLELALQR-------GAQDLVD  150 (156)
T ss_dssp             CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TT-SCTTCCCTTSCCHHHHHHHS-------CCHHHHH
T ss_pred             cccccccccccccccccccCCCCeeecccccccccccccccc-cc-ccccccCCCCCCHHHHHHHc-------CCHHHHH
Confidence            888888888887651               456777776665 33 44688999999999999998       7789999


Q ss_pred             HHccc
Q 037827          181 GLLYQ  185 (263)
Q Consensus       181 ~li~~  185 (263)
                      .|+.+
T Consensus       151 ~Ll~h  155 (156)
T d1bd8a_         151 ILQGH  155 (156)
T ss_dssp             HHHTT
T ss_pred             HHHhh
Confidence            98865

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.79  E-value=4.4e-19  Score=145.93  Aligned_cols=141  Identities=15%  Similarity=0.063  Sum_probs=94.3

Q ss_pred             hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcC----------------------------------HHHH
Q 037827           30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSS----------------------------------IFEF   75 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~----------------------------------iv~~   75 (263)
                      .|.+|.||||+||..|+.++++.|+..  +..++.. +..+.                                  ....
T Consensus        19 ~d~~G~t~L~~A~~~g~~e~v~~Ll~~--g~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (209)
T d1ot8a_          19 MDKTGETSLHLAARFARADAAKRLLDA--GADANSQ-DNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLI   95 (209)
T ss_dssp             HHHHCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHhh--ccccccc-ccccccccccccccccccccccccccccccccccccccccccc
Confidence            578999999999999999999999987  2222222 11110                                  0001


Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHH
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYG  140 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~  140 (263)
                      .+.......+.+.|+..++++ +.+|..|+|||++|+.+|+.++++.|+..+.+.               ..|+.+++..
T Consensus        96 ~~~~~~~~~~~~~L~~~~~~~-~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~  174 (209)
T d1ot8a_          96 LAARLAIEGMVEDLITADADI-NAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKA  174 (209)
T ss_dssp             HHHHTTCTTHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             ccccccchhhhhhhhhhcccc-cccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHH
Confidence            444555555666666666663 666666666666666666666666666655531               3455566666


Q ss_pred             HHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHH
Q 037827          141 LLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGL  182 (263)
Q Consensus       141 Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~l  182 (263)
                      |++.+ ..++.+|.+|.||||+|+++       ++.++++.|
T Consensus       175 Ll~~g-ad~n~~d~~g~Tpl~~A~~~-------~~~~iv~lL  208 (209)
T d1ot8a_         175 LLDNF-ANREITDHMDRLPRDVASER-------LHHDIVRLL  208 (209)
T ss_dssp             HHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHH
T ss_pred             HHHCC-CCCCCcCCCCCCHHHHHHHc-------CCHHHHhhc
Confidence            66654 44688999999999999998       678999865

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=8.9e-19  Score=137.76  Aligned_cols=80  Identities=18%  Similarity=0.222  Sum_probs=62.1

Q ss_pred             HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCC
Q 037827           76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAG  155 (263)
Q Consensus        76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~  155 (263)
                      +++...+.+++++|+.+|++. +.+|.+|+||||+|+..|+.++|++|+                  +. +..++.+|.+
T Consensus        73 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~T~L~~A~~~g~~~iv~~ll------------------~~-gad~~~~d~~  132 (153)
T d1awcb_          73 MAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLI------------------KY-GADVHTQSKF  132 (153)
T ss_dssp             HHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH------------------HT-TCCTTCCCTT
T ss_pred             cccccccceeeecccccCCcc-ccccccCchHHHhhhhcchhheeeecc------------------cc-ccCCcccCCC
Confidence            677777777777777777774 777777777777777777777777774                  33 3446788999


Q ss_pred             CchHHHHHhcCCCCCcCCcchHHHHHH
Q 037827          156 TGKILELLSKRPKAFASGIRLGYWKGL  182 (263)
Q Consensus       156 G~TPLHlAA~~~~~f~s~~~~~~~~~l  182 (263)
                      |.||||+|+++       ++.++++.|
T Consensus       133 g~Tpl~~A~~~-------g~~eiv~lL  152 (153)
T d1awcb_         133 CKTAFDISIDN-------GNEDLAEIL  152 (153)
T ss_dssp             SCCHHHHHHHT-------TCHHHHHHH
T ss_pred             CCCHHHHHHHc-------CCHHHHHhC
Confidence            99999999998       677888754

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.4e-18  Score=139.67  Aligned_cols=124  Identities=10%  Similarity=0.020  Sum_probs=101.7

Q ss_pred             hHHHHHHHHcCCHHHHHHHHhccCCCccccc-----ccCCcCHHHHHHHh---CCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827           35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACI-----IVDQSSIFEFIVAS---TGKLELISTLIRYEADLPNVRDEENLL  106 (263)
Q Consensus        35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~-----i~~~g~iv~~~AA~---~G~~eiv~~Ll~~ga~l~~~~d~~G~T  106 (263)
                      ...|+.|++.+++..+..++.. . ..+...     .+..|.++.++|+.   .|+.++|++|+++|+++ +.+|.+|+|
T Consensus         7 l~~L~~Av~~~dl~~l~~~~~~-g-~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadi-n~~d~~g~T   83 (154)
T d1dcqa1           7 LHSLCEAVKTRDIFGLLQAYAD-G-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGST   83 (154)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHT-T-CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCC
T ss_pred             HHHHHHHHHhCCHHHHHHHHHc-C-CCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCCh-hhhhhhhcc
Confidence            4567899999999999999876 2 222221     13345788899986   57899999999999995 999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW  186 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~  186 (263)
                      |||+||..|+.++|++|+++                   +..++.+|.+|.||||+|+++       ++.++++.|+..+
T Consensus        84 pLh~A~~~~~~~~v~~Ll~~-------------------gad~~~~d~~g~tpL~~A~~~-------~~~~i~~~L~~~~  137 (154)
T d1dcqa1          84 ALHYCCLTDNAECLKLLLRG-------------------KASIEIANESGETPLDIAKRL-------KHEHCEELLTQAL  137 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT-------------------TCCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred             cccccccccccccccccccc-------------------CccccccCCCCCCHHHHHHHc-------CCHHHHHHHHHhC
Confidence            99999999999999999643                   334678899999999999998       6789999998876


Q ss_pred             C
Q 037827          187 I  187 (263)
Q Consensus       187 ~  187 (263)
                      .
T Consensus       138 ~  138 (154)
T d1dcqa1         138 S  138 (154)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.6e-19  Score=136.16  Aligned_cols=122  Identities=16%  Similarity=0.149  Sum_probs=100.6

Q ss_pred             HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827           36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG  115 (263)
Q Consensus        36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g  115 (263)
                      +.|+.|+..|++++|+.|+++  +..++.. +..|....++||..|+.+++++|++.|+++ +.+|.+|+||||+|+.+|
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~--g~d~n~~-d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~-~~~d~~g~tpLh~A~~~g   78 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYE--VDDPSLP-NDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCN   78 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTST--TSSCCCC-CTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHHcCCHHHHHHHHHc--CCCcccc-cccccccccccccccccccccccccccccc-ccccccCcccccccchhh
Confidence            679999999999999999987  3455555 667788999999999999999999999995 999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc-CCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827          116 QRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELLSKRPKAFASGIRLGYWKGLLYQ  185 (263)
Q Consensus       116 ~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~  185 (263)
                      +.++|++|+++|++                   ++..+ .+|.||++++....     .++.+++++|+..
T Consensus        79 ~~~~v~~Ll~~ga~-------------------v~~~~~~~~~~~~~~~~a~~-----~g~~eiv~~L~~~  125 (130)
T d1ycsb1          79 NVQVCKFLVESGAA-------------------VFAMTYSDMQTAADKCEEME-----EGYTQCSQFLYGV  125 (130)
T ss_dssp             CHHHHHHHHHTTCC-------------------TTCCCSSSCCCHHHHCCSSS-----TTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC-------------------cccccCCCCCCHHHHHHHHH-----cChHHHHHHHHhH
Confidence            99999999754442                   44444 56889988765331     3677999988754

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.77  E-value=5.8e-19  Score=152.37  Aligned_cols=165  Identities=12%  Similarity=0.048  Sum_probs=138.7

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..|.+|+||||.|+..|+.++|+.|++. ... ... .+..+....++|+..|+.++++.|+++|+.. +..|..|.||+
T Consensus        68 ~~d~~G~T~L~~A~~~g~~eiv~~Ll~~-~~~-~~~-~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~  143 (291)
T d1s70b_          68 YANVDGLTALHQACIDDNVDMVKFLVEN-GAN-INQ-PDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPL  143 (291)
T ss_dssp             CBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCC-TTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred             ccCCCCCcHHHHHHhcCCceeeeeeccc-ccc-ccc-ccccccccccccccccccchhhcccccCccc-ccccccCcccc
Confidence            5688899999999999999999999998 322 222 2444566778999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCC-CC-----------------------------------------CCCCHHHHHHHHHhCC
Q 037827          109 HRAAKQGQRNVVCYLLEKTR-AP-----------------------------------------LDGSDDVAYGLLRKHP  146 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~~~a-~p-----------------------------------------~~~~~~va~~Ll~~~~  146 (263)
                      ++|+..++.++++.++.... +.                                         ..++.+++..|+..+ 
T Consensus       144 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g-  222 (291)
T d1s70b_         144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-  222 (291)
T ss_dssp             HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-
T ss_pred             ccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccce-
Confidence            99999999999999886433 20                                         346788888888765 


Q ss_pred             CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCC
Q 037827          147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVD  205 (263)
Q Consensus       147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~  205 (263)
                      ..++.+|.+|.||||+|++.       ++.++++.|+..|++++..+.-+.++.+.+++
T Consensus       223 ~din~~~~~g~TpL~~A~~~-------g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         223 YDVNIKDYDGWTPLHAAAHW-------GKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             CCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             ecccccccCCCCHHHHHHHc-------CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            45788999999999999997       78899999999999999998777778877764

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.77  E-value=1.4e-19  Score=162.97  Aligned_cols=98  Identities=17%  Similarity=0.116  Sum_probs=64.7

Q ss_pred             hhhcccChHHHHHHHHcCCHHHHHHH---HhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC--C
Q 037827           28 IIKDIANYKQVTRYLLEDDWKGLEDY---IMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRD--E  102 (263)
Q Consensus        28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~L---l~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d--~  102 (263)
                      ..++..|+||||.||..|+.+.++.+   +..  +..++.. +..|....++||..|+.++|++|+++|+++ +..+  .
T Consensus        84 ~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~--~~~in~~-~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~-~~~~~~~  159 (346)
T d2ajaa1          84 HKKGIKSEVICFVAAITGCSSALDTLCLLLTS--DEIVKVI-QAENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQA  159 (346)
T ss_dssp             HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--C--CSSCC---CHHHHHHHHHHHHTTCHHHHHHHHHSCTTT-HHHHHSH
T ss_pred             HhccCCCCcHHHHHHHhCCHHHHHHHHHHHhC--CCccccc-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCc-ccccccc
Confidence            45666777777777777777666553   333  3444433 444566667777777777777777777774 6654  3


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 037827          103 ENLLPIHRAAKQGQRNVVCYLLEKTRA  129 (263)
Q Consensus       103 ~G~TPLh~Aa~~g~~evv~~Ll~~~a~  129 (263)
                      +|+||||+||.+||.++|++|++.+++
T Consensus       160 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~  186 (346)
T d2ajaa1         160 ENYHAFRLAAENGHLHVLNRLCELAPT  186 (346)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHSCGG
T ss_pred             CCCChhHHHHHHhhHHHHHHHHHcCCc
Confidence            577777777777777777777777653

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.8e-19  Score=139.22  Aligned_cols=94  Identities=17%  Similarity=0.142  Sum_probs=84.2

Q ss_pred             HHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc
Q 037827           74 EFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI  153 (263)
Q Consensus        74 ~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D  153 (263)
                      .+.||..|+.++|++|+++|++ ++.+|.+|+||||+|+..|+.+++++|++                  . +..++.+|
T Consensus         5 L~~A~~~G~~~~v~~Ll~~g~d-~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~------------------~-g~~~~~~d   64 (130)
T d1ycsb1           5 LLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGHTEIVKFLVQ------------------F-GVNVNAAD   64 (130)
T ss_dssp             HHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHHHHHTCHHHHHHHHH------------------H-TCCTTCCC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-ccccccccccccccccccccccccccccc------------------c-cccccccc
Confidence            3479999999999999999999 59999999999999999999999999964                  3 33467789


Q ss_pred             CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCC
Q 037827          154 AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYN  194 (263)
Q Consensus       154 ~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~  194 (263)
                      .+|+||||+|+.+       +++++++.|+..|++++..+.
T Consensus        65 ~~g~tpLh~A~~~-------g~~~~v~~Ll~~ga~v~~~~~   98 (130)
T d1ycsb1          65 SDGWTPLHCAASC-------NNVQVCKFLVESGAAVFAMTY   98 (130)
T ss_dssp             TTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCS
T ss_pred             ccCcccccccchh-------hHHHHHHHHHHcCCCcccccC
Confidence            9999999999998       788999999999999997753

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4.2e-18  Score=142.29  Aligned_cols=148  Identities=11%  Similarity=-0.055  Sum_probs=109.2

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC-----CCCCCCC
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL-----PNVRDEE  103 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l-----~~~~d~~  103 (263)
                      .+|.+|+||||+|+..|+.+++++|++.  +..++.. +..|....++|+..|+.++++.|+..+...     .......
T Consensus        34 ~~d~~g~TpLh~A~~~~~~~iv~~L~~~--g~d~~~~-d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  110 (221)
T d1iknd_          34 FQNNLQQTPLHLAVITNQPEIAEALLGA--GCDPELR-DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN  110 (221)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCC-CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred             cCCCCCCccccccccccccccccccccc--ccccccc-ccccccccccccccccccccchhhhhcccccccccccccccc
Confidence            5688999999999999999999999987  2333333 455566667777777777777777765431     1233445


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCC-----C-----------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCC
Q 037827          104 NLLPIHRAAKQGQRNVVCYLLEKTRA-----P-----------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRP  167 (263)
Q Consensus       104 G~TPLh~Aa~~g~~evv~~Ll~~~a~-----p-----------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~  167 (263)
                      |.||||.|+..|+.+++++|+..++.     .           ..+..+++..|++. +..++.+|.+|.||||+|+++ 
T Consensus       111 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~-gad~~~~~~~G~tpl~~A~~~-  188 (221)
T d1iknd_         111 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQLTWGR-  188 (221)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTTS-
T ss_pred             cchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhc-CCcccccCCCCCCHHHHHHHC-
Confidence            77777777777777777777776653     0           45666777777765 455789999999999999987 


Q ss_pred             CCCcCCcchHHHHHHcccCC
Q 037827          168 KAFASGIRLGYWKGLLYQWI  187 (263)
Q Consensus       168 ~~f~s~~~~~~~~~li~~~~  187 (263)
                            ++.++++.|+....
T Consensus       189 ------~~~~~~~~l~~~~~  202 (221)
T d1iknd_         189 ------PSTRIQQQLGQLTL  202 (221)
T ss_dssp             ------SCHHHHHHHHTTSC
T ss_pred             ------CCHHHHHHHHHcCC
Confidence                  56799998887654

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5.8e-18  Score=137.40  Aligned_cols=122  Identities=10%  Similarity=0.056  Sum_probs=95.8

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc-------------CHHHH--------------------
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS-------------SIFEF--------------------   75 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g-------------~iv~~--------------------   75 (263)
                      ..|.+|+||||.|+..|+.++++.|++.  +...+.. ...+             .++..                    
T Consensus        35 ~~d~~g~TpL~~A~~~~~~~iv~~Ll~~--ga~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (228)
T d1k1aa_          35 IYNNLRQTPLHLAVITTLPSVVRLLVTA--GASPMAL-DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL  111 (228)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred             ccCCCCCccceehhcccccccccccccc--ccccccc-ccccccccccccccccccchhhhhhccccccccccccccccc
Confidence            5678899999999999999999999987  2222222 1111             00000                    


Q ss_pred             --------------------------------------HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCH
Q 037827           76 --------------------------------------IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQR  117 (263)
Q Consensus        76 --------------------------------------~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~  117 (263)
                                                            +|+..+..++++.++++|.++ +.+|..|.||||+|+..|+.
T Consensus       112 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~-~~~d~~g~t~L~~A~~~g~~  190 (228)
T d1k1aa_         112 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLL  190 (228)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCH
T ss_pred             cccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhcccc-ccccccCcchHHHHHHcCCH
Confidence                                                  888999999999999999985 89999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHH
Q 037827          118 NVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWK  180 (263)
Q Consensus       118 evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~  180 (263)
                      ++|++|+++                   +..++.+|.+|.||||+|+++       ++++++|
T Consensus       191 ~~v~~Ll~~-------------------Gad~n~~d~~G~TpL~~A~~~-------~~~divk  227 (228)
T d1k1aa_         191 PLVRTLVRS-------------------GADSSLKNCHNDTPLMVARSR-------RVIDILR  227 (228)
T ss_dssp             HHHHHHHHT-------------------TCCTTCCCTTSCCTTTTCSSH-------HHHHHHT
T ss_pred             HHHHHHHHC-------------------CCCCCCCCCCCCCHHHHHHhC-------CCccccC
Confidence            999998643                   334678899999999999987       6677764

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.71  E-value=4.4e-18  Score=139.84  Aligned_cols=176  Identities=14%  Similarity=0.080  Sum_probs=136.6

Q ss_pred             HHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 037827           47 WKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEK  126 (263)
Q Consensus        47 ~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~  126 (263)
                      -|+|+.||++  +..++...+..|....++||+.|+.+++++|++.|+++ +.+|..+++|++.++..++..........
T Consensus         2 ~~~v~~Ll~~--g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (209)
T d1ot8a_           2 AQVISDLLAQ--GAELNATMDKTGETSLHLAARFARADAAKRLLDAGADA-NSQDNTGRTPLHAAVAADAMGVFQILLRN   78 (209)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             HHHHHHHHHC--CCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccc-ccccccccccccccccccccccccccccc
Confidence            3789999998  45566655667788899999999999999999999994 99999999999999999998888777765


Q ss_pred             CCC-----C-----------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCC
Q 037827          127 TRA-----P-----------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQ  190 (263)
Q Consensus       127 ~a~-----p-----------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~  190 (263)
                      ...     .           ......+...|.. .+..++.+|..|.||||.++.+       +...+++.++..+.+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~t~l~~~~~~-------~~~~~~~~l~~~~~~~~  150 (209)
T d1ot8a_          79 RATNLNARMHDGTTPLILAARLAIEGMVEDLIT-ADADINAADNSGKTALHWAAAV-------NNTEAVNILLMHHANRD  150 (209)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHH-TTCCTTCBCTTSCBHHHHHHHT-------TCHHHHHHHHHTTCCTT
T ss_pred             cccccccccccccccccccccccchhhhhhhhh-hcccccccCCCCCCcchhhccc-------Ccceeeeeecccccccc
Confidence            553     1           2223333444444 4555678899999999999987       67799999999999888


Q ss_pred             CCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827          191 EEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                      ..+..+.++.+.++-             ....++...||..|||+    +.|+|||++|.
T Consensus       151 ~~d~~g~TpL~~A~~-------------~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~  197 (209)
T d1ot8a_         151 AQDDKDETPLFLAAR-------------EGSYEASKALLDNFANREITDHMDRLPRDVAS  197 (209)
T ss_dssp             CCCTTCCCHHHHHHH-------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             ccccccccccchhcc-------------ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            876555444322221             22367788889999998    88999999995

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.2e-17  Score=131.60  Aligned_cols=113  Identities=19%  Similarity=0.124  Sum_probs=95.1

Q ss_pred             HHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHH
Q 037827           74 EFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVA  138 (263)
Q Consensus        74 ~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va  138 (263)
                      .++||..|+.++|++|+++|++ ++.+|.+|+||||+|+ .|+.+++++|+++++++               ..+..+.+
T Consensus         5 Lh~Aa~~g~~~~v~~Ll~~g~d-~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~   82 (156)
T d1ihba_           5 LASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTL   82 (156)
T ss_dssp             HHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCC-cCccCCcccccccccc-cccccccccccccccccccccccCcccccccccccccccc
Confidence            4689999999999999999999 5999999999999886 79999999999999873               45677777


Q ss_pred             HHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC-CCCCCCCCC
Q 037827          139 YGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI-PVQEEYNPH  196 (263)
Q Consensus       139 ~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~-~v~~~~~~~  196 (263)
                      ..++..+.. .+..|..|.+|||+|++.       ++.++++.|+..+. +++..+.-+
T Consensus        83 ~~l~~~~~~-~~~~~~~~~~~l~~a~~~-------~~~~~~~~Ll~~~~~~~~~~d~~g  133 (156)
T d1ihba_          83 QTLLEFQAD-VNIEDNEGNLPLHLAAKE-------GHLRVVEFLVKHTASNVGHRNHKG  133 (156)
T ss_dssp             HHHHHTTCC-TTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHSCCCTTCCCTTS
T ss_pred             ccccccccc-cccccccccccccccccc-------ccccccccccccccccccccCCCC
Confidence            778776544 677899999999999997       67799999998875 555554433

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=2.9e-17  Score=128.94  Aligned_cols=137  Identities=15%  Similarity=0.046  Sum_probs=108.1

Q ss_pred             hHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q 037827           35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQ  114 (263)
Q Consensus        35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~  114 (263)
                      .|||+.||+.|+.++|++||++ .. .+.  .+..|..+.++|+..++.++++.++...... ...+..+.++++.++..
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~-ga-~~~--~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMAN-GA-PFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE   77 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHH-TC-CCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHc-CC-Ccc--cccCCCccccccccccccccccccccccccc-ccccccccccccccccc
Confidence            4888889888999999888887 22 222  2556677788888888888888888888774 77788888888888888


Q ss_pred             CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCC
Q 037827          115 GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYN  194 (263)
Q Consensus       115 g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~  194 (263)
                      .+.+++++|+.+                   +...+.+|.+|.||||+|++.       ++.++++.|+..|++++..+.
T Consensus        78 ~~~~~~~~l~~~-------------------~~~~~~~~~~g~T~L~~A~~~-------g~~~iv~~ll~~gad~~~~d~  131 (153)
T d1awcb_          78 GHANIVEVLLKH-------------------GADVNAKDMLKMTALHWATEH-------NHQEVVELLIKYGADVHTQSK  131 (153)
T ss_dssp             TCHHHHHHHHTT-------------------TCCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCT
T ss_pred             ccceeeeccccc-------------------CCccccccccCchHHHhhhhc-------chhheeeeccccccCCcccCC
Confidence            888888888543                   234566899999999999997       778999999999999988766


Q ss_pred             CCCCCCCC
Q 037827          195 PHAHAHSE  202 (263)
Q Consensus       195 ~~~~~~~~  202 (263)
                      -+.+|.+-
T Consensus       132 ~g~Tpl~~  139 (153)
T d1awcb_         132 FCKTAFDI  139 (153)
T ss_dssp             TSCCHHHH
T ss_pred             CCCCHHHH
Confidence            55554443

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=1e-17  Score=147.19  Aligned_cols=154  Identities=8%  Similarity=-0.002  Sum_probs=96.5

Q ss_pred             cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcH-------HHHHHHHHcCCCCCCCCCCC
Q 037827           31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKL-------ELISTLIRYEADLPNVRDEE  103 (263)
Q Consensus        31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~-------eiv~~Ll~~ga~l~~~~d~~  103 (263)
                      |.+|+||||+||..|+.++|+.||+.  +..++.. +..|....++||..|+.       +++++|.   .+ +..+|..
T Consensus       104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~--gad~~~~-d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~---~~-~~~~d~~  176 (301)
T d1sw6a_         104 DEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYG-DNMGESCLVKAVKSVNNYDSGTFEALLDYLY---PC-LILEDSM  176 (301)
T ss_dssp             STTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBC-CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG---GG-GGEECTT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCcC-CcccccHHHHhhhcccchhhhhHHHHHHHHh---hh-hhhcccc
Confidence            56677777777777777777777766  3444443 55566667777766642       3444433   23 3666777


Q ss_pred             CCcHHHHHHHcCC----HHH--------HHHHHhCCCCC----------------CCCCHHHH-----HHHHHhCCCccc
Q 037827          104 NLLPIHRAAKQGQ----RNV--------VCYLLEKTRAP----------------LDGSDDVA-----YGLLRKHPKLAW  150 (263)
Q Consensus       104 G~TPLh~Aa~~g~----~ev--------v~~Ll~~~a~p----------------~~~~~~va-----~~Ll~~~~~~~~  150 (263)
                      |+||||.|+..+.    ..+        +.+++..+..+                ........     ..++..   .++
T Consensus       177 g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~in  253 (301)
T d1sw6a_         177 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN---MLN  253 (301)
T ss_dssp             CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH---TTT
T ss_pred             cCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhc---Ccc
Confidence            7777777766443    222        23334433321                00000000     111222   367


Q ss_pred             cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCC
Q 037827          151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHS  201 (263)
Q Consensus       151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~  201 (263)
                      .+|.+|+||||+||++       ++.++++.|+..|++++..+..+.+|.+
T Consensus       254 ~~D~~G~TpLh~A~~~-------g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~  297 (301)
T d1sw6a_         254 AQDSNGDTCLNIAARL-------GNISIVDALLDYGADPFIANKSGLRPVD  297 (301)
T ss_dssp             CCCTTSCCHHHHHHHH-------CCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred             CCCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence            8899999999999997       7889999999999999999876655544

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.4e-16  Score=126.32  Aligned_cols=113  Identities=12%  Similarity=0.029  Sum_probs=93.7

Q ss_pred             HHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHH
Q 037827           75 FIVASTGKLELISTLIRY-EADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVA  138 (263)
Q Consensus        75 ~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va  138 (263)
                      +.||..|+.++|+.|++. +++ ++.+|..|+||||+|+ .|+.++|++|+.++.++               ..+..++.
T Consensus         7 ~~Aa~~g~~~~vk~lL~~~~~~-~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   84 (156)
T d1bd8a_           7 SGAAARGDVQEVRRLLHRELVH-PDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTL   84 (156)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCC-TTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHcCCHHHHHHHHHhCCCC-CCccCCCCCccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence            479999999999999986 667 5999999999999986 58999999999998872               56778888


Q ss_pred             HHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCC
Q 037827          139 YGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAH  198 (263)
Q Consensus       139 ~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~  198 (263)
                      ..++..+.. ++.+|.+|.||||+|++.       ++.++++.|+ .+++++..+.-+.+
T Consensus        85 ~~~l~~~~~-~n~~~~~~~t~L~~A~~~-------~~~~i~~~L~-~~~~~~~~d~~G~T  135 (156)
T d1bd8a_          85 KVLVEHGAD-VNVPDGTGALPIHLAVQE-------GHTAVVSFLA-AESDLHRRDARGLT  135 (156)
T ss_dssp             HHHHHTTCC-SCCCCTTSCCHHHHHHHH-------TCHHHHHHHH-TTSCTTCCCTTSCC
T ss_pred             ccccccccc-cccccCCCCeeecccccc-------cccccccccc-ccccccccCCCCCC
Confidence            888887544 678899999999999987       6789998776 67777766543333

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=5.1e-16  Score=124.49  Aligned_cols=95  Identities=12%  Similarity=0.088  Sum_probs=83.4

Q ss_pred             hcccChHHHHHHHHc---CCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827           30 KDIANYKQVTRYLLE---DDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL  106 (263)
Q Consensus        30 ~~~~~~t~Lh~Aa~~---G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T  106 (263)
                      .+..|.||||.|+..   |..++|++|++.  +..++.. +..|.+..++||..|+.+++++|+++|+++ +.+|.+|+|
T Consensus        41 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~--gadin~~-d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~t  116 (154)
T d1dcqa1          41 GHEPDETALHLAVRSVDRTSLHIVDFLVQN--SGNLDKQ-TGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGET  116 (154)
T ss_dssp             CSSTTCBHHHHHHHHCCTTTHHHHHHHHHH--CSCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred             CCCCCCchHHHHHHhcCCCCHHHHHHHHHc--CCChhhh-hhhhccccccccccccccccccccccCccc-cccCCCCCC
Confidence            456789999999974   678999999987  4556555 667788999999999999999999999995 999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCC
Q 037827          107 PIHRAAKQGQRNVVCYLLEKTR  128 (263)
Q Consensus       107 PLh~Aa~~g~~evv~~Ll~~~a  128 (263)
                      |||+|+..|+.+++++|++.++
T Consensus       117 pL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1         117 PLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHHHHHHhCC
Confidence            9999999999999999987544

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=1.8e-16  Score=139.06  Aligned_cols=166  Identities=11%  Similarity=0.018  Sum_probs=99.3

Q ss_pred             ccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHH
Q 037827           62 LACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGL  141 (263)
Q Consensus        62 ~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~L  141 (263)
                      ++..++..|.+..++||..|+.++|++|+++|+++ +.+|..|+||||.||..++..-.            +.+...+.+
T Consensus        99 vn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~~~------------~~~~~ll~~  165 (301)
T d1sw6a_          99 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDS------------GTFEALLDY  165 (301)
T ss_dssp             SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHT------------TCHHHHHHH
T ss_pred             cCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CcCCcccccHHHHhhhcccchhh------------hhHHHHHHH
Confidence            44444677888999999999999999999999995 99999999999999998763110            011111111


Q ss_pred             HHhCCCccccccCCCchHHHHHhcCCCCCcCCcchH--------HHHHHcccCCCCCCCC-CCCCCCCCC----------
Q 037827          142 LRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLG--------YWKGLLYQWIPVQEEY-NPHAHAHSE----------  202 (263)
Q Consensus       142 l~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~--------~~~~li~~~~~v~~~~-~~~~~~~~~----------  202 (263)
                      +.   .....+|..|+||||.++.....   .....        ++..++..+....... .......+.          
T Consensus       166 l~---~~~~~~d~~g~t~lh~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (301)
T d1sw6a_         166 LY---PCLILEDSMNRTILHHIIITSGM---TGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL  239 (301)
T ss_dssp             HG---GGGGEECTTCCCHHHHHHHHHTS---TTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHH
T ss_pred             Hh---hhhhhcccccCCHHHHHHHHhCc---cccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHH
Confidence            22   23566789999999988765321   11111        2333333332221111 111000000          


Q ss_pred             -----------CCChhhhhhhccccccc--cchhhhHHHHhhhccc----cccCCccceec
Q 037827          203 -----------NVDGDLEKQLSETSHSA--FGFELAYLLLHWFVSF----RVSTTPLTLAT  246 (263)
Q Consensus       203 -----------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~  246 (263)
                                 .++..+..+-+.+-+++  -..++..+||..|||+    ++|.|||++|.
T Consensus       240 ~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         240 ENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence                       01111222233333333  3367777888889998    89999999985

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.8e-16  Score=121.01  Aligned_cols=93  Identities=22%  Similarity=0.214  Sum_probs=79.6

Q ss_pred             hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827           29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI  108 (263)
Q Consensus        29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL  108 (263)
                      ..+..|+||||.|+ .|+.++++.|++.  +..++.....++....++||..|+.+++++|+++|+++ +.+|..|+|||
T Consensus        31 ~~~~~g~t~l~~a~-~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~G~T~l  106 (125)
T d1bi7b_          31 APNSYGRRPIQVMM-MGSARVAELLLLH--GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPV  106 (125)
T ss_dssp             CCCSSSCCTTTSSC-TTCHHHHHHHHTT--TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHH
T ss_pred             cccccccccccccc-ccccccccccccc--cccccccccccccccccccccccccccccccccccccc-ccccCCCCCHH
Confidence            56788999999665 7999999999987  34444443334456788999999999999999999995 99999999999


Q ss_pred             HHHHHcCCHHHHHHHHh
Q 037827          109 HRAAKQGQRNVVCYLLE  125 (263)
Q Consensus       109 h~Aa~~g~~evv~~Ll~  125 (263)
                      |+|+.+|+.++|++|++
T Consensus       107 ~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_         107 DLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHTCHHHHHHHSS
T ss_pred             HHHHHcCCHHHHHHHHh
Confidence            99999999999999975

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.55  E-value=3.1e-16  Score=140.75  Aligned_cols=115  Identities=21%  Similarity=0.116  Sum_probs=92.7

Q ss_pred             CcCHHHHHHHhCCcHHHHHH---HHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------
Q 037827           69 QSSIFEFIVASTGKLELIST---LIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------  130 (263)
Q Consensus        69 ~g~iv~~~AA~~G~~eiv~~---Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------  130 (263)
                      .|.+..++||.+|+.+++++   |++.|+++ +.+|.+|+||||+||++||.++|++|++.|+++               
T Consensus        89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~i-n~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~  167 (346)
T d2ajaa1          89 KSEVICFVAAITGCSSALDTLCLLLTSDEIV-KVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRL  167 (346)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHTTC--CCSSC-C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHH
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHHHHhCCCcc-cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHH
Confidence            34566669999999887765   78999995 999999999999999999999999999999862               


Q ss_pred             --CCCCHHHHHHHHHhCCCc--cccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCC
Q 037827          131 --LDGSDDVAYGLLRKHPKL--AWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQE  191 (263)
Q Consensus       131 --~~~~~~va~~Ll~~~~~~--~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~  191 (263)
                        ..|+.+++..|++.++..  .+..+.+|.||||.|+++       |+++++++|+..|++++.
T Consensus       168 Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~-------g~~~iv~~Ll~~ga~~~~  225 (346)
T d2ajaa1         168 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR-------GHHNVINFLLDCPVMLAY  225 (346)
T ss_dssp             HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTT-------CCHHHHHHHTTSHHHHHH
T ss_pred             HHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhc-------CHHHHHHHHHhCCCCcch
Confidence              789999999999986543  234566788888888876       788999999998876543