Citrus Sinensis ID: 037901

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MAQLPPKIPNMTPAWPDFFHHKVPSSMANNNINNRSNVHNPSWVDEFLDFSSARRGTHRRSVSDSITYLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDDLPNAT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccHHcccccccccccccccccccccccccccHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEcccccHHcccccccccccccccccccccccccccHHHHHHcccccccccc
Coil and Loop (DISEMBL)
maqlppkipnmtpawpdffhhkvpssmannninnrsnvhnpswvdefldfssarrgthrrsvsdsityleapmldecrgagaapgsgsgnitnsnhhefdkfddeqFMSMftddlpnat
Flexible Loop (DISEMBL)
maqlppkipnMTPAWPDFFHHKVPSSMANNNINNRSNVHNPSWVDEFLDFssarrgthrrsvsdsityLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDDLPNAT
Low Complexity Region (SEG)
MAQLPPKIPNMTPAWPDFFHHKVPssmannninnrsnvhnpsWVDEFLDFSSARRGTHRRSVSDSITYLEAPMLDECRgagaapgsgsgNITNSNHHEFDKFDDEQFMSMFTDDLPNAT
Disordered region (IsUnstruct)
****************DFF**********************SWVDEFLDF*****************YL**************************************************
Disordered Region (DISOPRED)
**QLPPKIPNMTPAW************************NPSWVDEFLD****************ITYLEAPMLDECRGA*****************EFDKFDDEQFMSMFT*DLPN**
Disordered Region (DISEMBL)
MAQLPPKIPNMTPAWPDFFHHKVPSSMANNNINNRSNVHNPSWVDEFLDFSSA*********SDSITYLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDDLPNAT
Disordered Region (DISPRO)
****PPKIPNMTPAWP************************PSWVDEFLDFSSAR******SVSDSITYLEAPMLDECR**********************KFDDEQFMSMF********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAQLPPKIPNMTPAWPDFFHHKVPSSMANNNINNRSNVHNPSWVDEFLDFSSARRGTHRRSVSDSITYLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDDLPNAT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
255568343	325	Transcription factor RF2a, putative [Ric	1.0	0.366	0.560	2e-32
358343352	344	Transcription factor bZIP48 [Medicago tr	0.857	0.296	0.611	4e-32
217072696	200	unknown [Medicago truncatula]	0.857	0.51	0.611	3e-31
224122022	317	predicted protein [Populus trichocarpa]	0.966	0.362	0.579	6e-30
449453539	326	PREDICTED: uncharacterized protein LOC10	0.974	0.355	0.540	9e-30
225446525	295	PREDICTED: uncharacterized protein LOC10	0.857	0.345	0.620	2e-29
359806839	320	transcription factor bZIP58 [Glycine max	0.873	0.325	0.595	3e-28
356549868	311	PREDICTED: transcription factor RF2a-lik	0.848	0.324	0.596	6e-28
351722123	330	bZIP transcription factor bZIP50 [Glycin	0.848	0.306	0.576	3e-27
356543012	330	PREDICTED: probable transcription factor	0.848	0.306	0.576	3e-27

>gi|255568343|ref|XP_002525146.1| Transcription factor RF2a, putative [Ricinus communis] gi|223535605|gb|EEF37273.1| Transcription factor RF2a, putative [Ricinus communis]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/132 (56%), Positives = 88/132 (66%), Gaps = 13/132 (9%)

Query: 1   MAQLPPKIPNMTPAWPDFFHH-KVPS----------SMANNNINNRSNVHNPSWVDEFLD 49
           MAQLPPKIPNM P WP+F HH K+PS          + A+      +   NPSWVDEFLD
Sbjct: 1   MAQLPPKIPNMQPTWPEFSHHQKLPSMGIIAPSNNNAAASTAAAAATTTQNPSWVDEFLD 60

Query: 50  FSSARRGTHRRSVSDSITYLEAPMLDECRGAGA--APGSGSGNITNSNHHEFDKFDDEQF 107
           FSSARRGTHRRSVSDSI +LEAP+++ECR  GA            +++  +FDKFDDEQF
Sbjct: 61  FSSARRGTHRRSVSDSIAFLEAPLIEECRAIGAPHHHHHHHHGSGHNSSSDFDKFDDEQF 120

Query: 108 MSMFTDDLPNAT 119
           MSMF DD+ NA 
Sbjct: 121 MSMFNDDISNAV 132

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358343352|ref|XP_003635768.1| Transcription factor bZIP48 [Medicago truncatula] gi|355501703|gb|AES82906.1| Transcription factor bZIP48 [Medicago truncatula]

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 89/121 (73%), Gaps = 19/121 (15%)

Query: 1   MAQLPPKIPNMTPAWPDFFHHK---VPSSMANNNI---NNRSNVHNPSWVDEFLDFSSAR 54
           MAQLPPKIPNM+P+WPDF   +   +P+S++ NNI   NN  N  NPSWVDEFLDFSSAR
Sbjct: 1   MAQLPPKIPNMSPSWPDFSTQQKNIMPTSISTNNIVTTNNYQN-QNPSWVDEFLDFSSAR 59

Query: 55  RGTHRRSVSDSITYLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDD 114
           RG HRRSVSDS+T+LE PMLD         G   G   N+N +EFDKFDDEQF+SMF+D+
Sbjct: 60  RGAHRRSVSDSVTFLETPMLD---------GKHDG---NNNDNEFDKFDDEQFLSMFSDE 107

Query: 115 L 115
           +
Sbjct: 108 I 108

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072696|gb|ACJ84708.1| unknown [Medicago truncatula]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 89/121 (73%), Gaps = 19/121 (15%)

Query: 1   MAQLPPKIPNMTPAWPDFFHHK---VPSSMANNNI---NNRSNVHNPSWVDEFLDFSSAR 54
           MAQLPPKIPNM+P+WPDF   +   +P+S++ NNI   NN  N  NPSWVDEFLDFSSAR
Sbjct: 1   MAQLPPKIPNMSPSWPDFSTQQKNIMPTSISTNNIVTTNNYQN-QNPSWVDEFLDFSSAR 59

Query: 55  RGTHRRSVSDSITYLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDD 114
           RG HRRSVSDS+T+LE PMLD         G   G   N+N +EFDKFDDEQF+SMF+D+
Sbjct: 60  RGAHRRSVSDSVTFLETPMLD---------GKHDG---NNNDNEFDKFDDEQFLSMFSDE 107

Query: 115 L 115
           +
Sbjct: 108 I 108

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122022|ref|XP_002330711.1| predicted protein [Populus trichocarpa] gi|222872315|gb|EEF09446.1| predicted protein [Populus trichocarpa]

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/138 (57%), Positives = 89/138 (64%), Gaps = 23/138 (16%)

Query: 1   MAQLPPKIPN-MTPAWPDFFHHKVPSSM---------ANNNI-------NNRSNVHNPSW 43
           MAQLPPKIPN MTP+WPDF H K PS           AN  I              NPSW
Sbjct: 1   MAQLPPKIPNNMTPSWPDFSHKKSPSICIMGTSPPHDANAVIPTVTANTTATVASQNPSW 60

Query: 44  VDEFLDFSSARRGTHRRSVSDSITYL-EAP-MLDECRGAGAAPGSGSGNITNSNHHEFDK 101
           VDEFLDFS  RRGTHRRSVSDSI +L EAP ML+ECR  G APG GS + ++S   +FD+
Sbjct: 61  VDEFLDFSLTRRGTHRRSVSDSIAFLEEAPTMLEECRSTG-APGLGSRHYSSS---DFDR 116

Query: 102 FDDEQFMSMFTDDLPNAT 119
           FDDEQFMSMF D + NA 
Sbjct: 117 FDDEQFMSMFNDGISNAV 134

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453539|ref|XP_004144514.1| PREDICTED: uncharacterized protein LOC101205276 [Cucumis sativus] gi|449517287|ref|XP_004165677.1| PREDICTED: uncharacterized protein LOC101231108 [Cucumis sativus]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 80/122 (65%), Gaps = 6/122 (4%)

Query: 1   MAQLPPKIPNMTPAWPDFFHHKVPS--SMANNNINNRSNVHNPSWVDEFLDFSSARRGTH 58
           MAQLPPKIPNM   W +    K+PS  + A           NPSWVDEFLDFSS RRG+H
Sbjct: 1   MAQLPPKIPNMASNWSELSRQKIPSMETFAPTTTTPPVTQQNPSWVDEFLDFSSVRRGSH 60

Query: 59  RRSVSDSITYLEAPML-DECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDDLPN 117
           RRSVSDSIT+LE PML D+CR + A P   +      + +EFD+FDDEQF+SMF D++  
Sbjct: 61  RRSVSDSITFLEMPMLEDDCRASAAPPPPSTA---TGDQNEFDRFDDEQFLSMFNDEISA 117

Query: 118 AT 119
           A 
Sbjct: 118 AV 119

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446525|ref|XP_002275912.1| PREDICTED: uncharacterized protein LOC100243740 [Vitis vinifera] gi|302143381|emb|CBI21942.3| unnamed protein product [Vitis vinifera]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 81/116 (69%), Gaps = 14/116 (12%)

Query: 1   MAQLPPKIPNMTPAWPDFFHHKVPSSMANNNINNRSNVHNPSWVDEFLDFSSARRGTHRR 60
           MAQLPPK+P M   WP F H K+PS M N          NPSWVDEFLDFSSA+RGTHRR
Sbjct: 1   MAQLPPKVPAMAANWPSFPHQKIPS-MGNLAP---PATQNPSWVDEFLDFSSAKRGTHRR 56

Query: 61  SVSDSITYLEAPMLDECRGAGAAPG-SGSGNITNSNHHEFDKFDDEQFMSMFTDDL 115
           SVSDSI + EAP  D+CR +GAAP   G+GN       EFD+FDDEQFMSMFTD +
Sbjct: 57  SVSDSIAFFEAP--DDCRNSGAAPRPPGAGN-------EFDQFDDEQFMSMFTDAM 103

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806839|ref|NP_001241568.1| transcription factor bZIP58 [Glycine max] gi|255641640|gb|ACU21092.1| unknown [Glycine max]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 85/121 (70%), Gaps = 17/121 (14%)

Query: 1   MAQLPPKIPNMTPAWPDFFHHKVPSSM--ANNNINNRSNVH----NPSWVDEFLDFSSAR 54
           MAQLPPKIPNM+P+WPDF  H+    +   NNN    +N H    NPSWVDEFLDFSSAR
Sbjct: 1   MAQLPPKIPNMSPSWPDFSSHQQKMQLPPLNNNGTITNNYHQHNQNPSWVDEFLDFSSAR 60

Query: 55  RGTHRRSVSDSITYLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDD 114
           RG HRRSVSDSITYL++P+  +C         G     N+N +EFDKFDDEQFMSMFTD+
Sbjct: 61  RGVHRRSVSDSITYLDSPV--KC---------GGNKNNNNNENEFDKFDDEQFMSMFTDE 109

Query: 115 L 115
           +
Sbjct: 110 V 110

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549868|ref|XP_003543312.1| PREDICTED: transcription factor RF2a-like [Glycine max]

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 85/119 (71%), Gaps = 18/119 (15%)

Query: 1   MAQLPPKIPNMTPAWPDFFHH----KVPSSMANNNINNRSNVHNPSWVDEFLDFSSARRG 56
           M QLPPKIPNM+P+WPDF  H    ++P   + +N NN  +  NPSWVDEFLDFSSARRG
Sbjct: 1   MTQLPPKIPNMSPSWPDFSSHHQKMQLPPLKSGSN-NNYQHNQNPSWVDEFLDFSSARRG 59

Query: 57  THRRSVSDSITYLEAPMLDECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDDL 115
            HRRSVSDSITYL++PM  +C           G   N+N +EFDKFDDEQFMSMFTD++
Sbjct: 60  AHRRSVSDSITYLDSPM--KC-----------GENNNNNENEFDKFDDEQFMSMFTDEV 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722123|ref|NP_001236977.1| bZIP transcription factor bZIP50 [Glycine max] gi|113367174|gb|ABI34644.1| bZIP transcription factor bZIP50 [Glycine max]

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 80/118 (67%), Gaps = 17/118 (14%)

Query: 1   MAQLPPKIPNMTPAWPDF--FHHKVPSSMANNNINNRSNVHNPSWVDEFLDFSSARRGTH 58
           MAQLPPKIPNMTP WPDF   H K+PS      +   S+  NPSWVDE L+FS ARRG  
Sbjct: 1   MAQLPPKIPNMTPNWPDFSSLHQKMPS------LQTTSSNQNPSWVDEILEFSVARRGAP 54

Query: 59  RRSVSDSITYLEAPMLD--ECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDD 114
           RRSVSDS+T+LEAP+LD   C+G     G G  N       EF++FDDEQFMSMF+D+
Sbjct: 55  RRSVSDSVTFLEAPLLDHHHCKGGSVVGGGGGNN-------EFERFDDEQFMSMFSDE 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543012|ref|XP_003539957.1| PREDICTED: probable transcription factor PosF21 [Glycine max]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 80/118 (67%), Gaps = 17/118 (14%)

Query: 1   MAQLPPKIPNMTPAWPDF--FHHKVPSSMANNNINNRSNVHNPSWVDEFLDFSSARRGTH 58
           MAQLPPKIPNMTP WPDF   H K+PS      +   S+  NPSWVDE L+FS ARRG  
Sbjct: 1   MAQLPPKIPNMTPNWPDFSSLHQKMPS------LQTTSSNQNPSWVDEILEFSVARRGAP 54

Query: 59  RRSVSDSITYLEAPMLD--ECRGAGAAPGSGSGNITNSNHHEFDKFDDEQFMSMFTDD 114
           RRSVSDS+T+LEAP+LD   C+G     G G  N       EF++FDDEQFMSMF+D+
Sbjct: 55  RRSVSDSVTFLEAPLLDHHHCKGGSVVGGGGGNN-------EFERFDDEQFMSMFSDE 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
TAIR|locus:2053761	321	BZIP34 "AT2G42380" [Arabidopsi	0.605	0.224	0.56	1.1e-25
TAIR|locus:2085425	329	BZIP61 [Arabidopsis thaliana (	0.605	0.218	0.546	2.1e-25

TAIR|locus:2053761 BZIP34 "AT2G42380" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
 Identities = 42/75 (56%), Positives = 47/75 (62%)

Query:     1 MAQLPPKIPNMTPAWPDFFHHKV-PXXXXXXXXXXXXXXXXX--XWVDEFLDFSSARRGT 57
             MAQLPPKIPNMT  WPDF   K+ P                    WVDEFLDFS++RRG 
Sbjct:     1 MAQLPPKIPNMTQHWPDFSSQKLSPFSTPTATAVATATTTVQNPSWVDEFLDFSASRRGN 60

Query:    58 HRRSVSDSITYLEAP 72
             HRRS+SDSI +LEAP
Sbjct:    61 HRRSISDSIAFLEAP 75

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2085425 BZIP61 [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
 Identities = 41/75 (54%), Positives = 46/75 (61%)

Query:     1 MAQLPPKIPNMT-PAWPDFFHHKVPXXXXXXXXXXXXXXXXX--XWVDEFLDFSSARRGT 57
             MAQLPPKIP MT P WPDF   K+P                    W+DEFLDFS+ RRGT
Sbjct:     1 MAQLPPKIPTMTTPNWPDFSSQKLPSIAATAAAAATAGPQQQNPSWMDEFLDFSATRRGT 60

Query:    58 HRRSVSDSITYLEAP 72
             HRRS+SDSI +LE P
Sbjct:    61 HRRSISDSIAFLEPP 75

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.01420082 hypothetical protein (317 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00