Citrus Sinensis ID: 037942

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDAESGDIGQQQLFCTRSNGNIHHVEG
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHEEcccccHHHHHHHccccHHHHHHHHHHHHHHcccccccccEEEEHHHHHHHHHHHHHHccccccccccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHEEEEHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mrmlddlmPFLAMVTVQLGYagmnftsklaldsgmkPLVLVAYRQMFATLATipfayfiewktrpkitwpILFQIFLCSVTGATGNQVLYFVglenstptigcaLTNILPAITFVLAVIFRQEYVAiktkpgqakvFGTIICVGGAMVLSfyhgktfgipnssIHWKYAEKmseensgnksnlILGSIAIIASSISWAAWVIIQTKlskkfpapytcttLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSiqrkgplyvsvFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVlwgkdkelkpdnvivepeltkdaesgdigqqqlfctrsngnihhveg
Flexible Loop (DISEMBL)
MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIktkpgqakvFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEpeltkdaesgdigqqqlfctrsngnihhveg
Low Complexity Region (SEG)
MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGsiaiiassiswaawviiQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDAESGDIGQQQLFCTRSNGNIHHVEG
Disordered region (IsUnstruct)
*****DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYA************NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIV******************F*************
Disordered Region (DISOPRED)
******L**FLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNS*******************NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWG********************************************
Disordered Region (DISEMBL)
MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAE********NKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDAESGDIGQQQLFCTRSNGNIHHVEG
Disordered Region (DISPRO)
MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNS*******************NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD******************************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDAESGDIGQQQLFCTRSNGNIHHVEG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	369	2.2.26 [Sep-21-2011]
Q8GXB4	374	WAT1-related protein At1g	yes	no	0.929	0.917	0.621	1e-126
Q9FL41	402	WAT1-related protein At5g	no	no	0.929	0.853	0.376	3e-66
Q9FNA5	377	WAT1-related protein At5g	no	no	0.913	0.893	0.396	6e-66
Q94AP3	389	Protein WALLS ARE THIN 1	no	no	0.878	0.832	0.383	9e-64
O80638	374	WAT1-related protein At2g	no	no	0.861	0.850	0.375	7e-63
Q501F8	373	WAT1-related protein At4g	no	no	0.940	0.930	0.353	6e-62
F4IJ08	394	WAT1-related protein At2g	no	no	0.888	0.832	0.347	6e-61
Q9LPF1	370	WAT1-related protein At1g	no	no	0.897	0.894	0.377	1e-60
Q9LI65	364	WAT1-related protein At3g	no	no	0.951	0.964	0.339	2e-59
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.962	0.934	0.343	3e-59

>sp|Q8GXB4|WTR2_ARATH WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380 PE=2 SV=1

 Score =  450 bits (1158), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/354 (62%), Positives = 273/354 (77%), Gaps = 11/354 (3%)

Query: 5   DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR 64
            D++PFLAMV VQ+GYAGMN TSK+A+++GMKPL+LVAYRQ+FAT+AT P A+F+E KTR
Sbjct: 4   SDMLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTR 63

Query: 65  PKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEY 124
           PKIT  IL Q+F CS+TGATGNQVLYFVGL+NS+PTI CALTN+LPA+TF+LA IFRQE 
Sbjct: 64  PKITLRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQET 123

Query: 125 VAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEE-NSGNKSNL 183
           V IK   GQAKV GT++CV GAMVLSFYHG T GI  S IHW YAE +++  +S   SN 
Sbjct: 124 VGIKKASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKHGSSSGHSNF 183

Query: 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW 243
            LG   I+A+++SWAAW IIQTK+S+ F APYT T LMCL+ SI C  I LI +   + W
Sbjct: 184 FLGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDW 243

Query: 244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEK 303
            L++ +R +SALY+G+V SALAFCL+ W++QRKGPLYVSVFSPLLLV+VAI SWAL +EK
Sbjct: 244 SLSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEK 303

Query: 304 LFIGTAIGSVLIVTGLYAVLWGKD----------KELKPDNVIVEPELTKDAES 347
           L+ GT +GS L+V GLY VLWGKD          +++K  N  V+ E  +D ES
Sbjct: 304 LYTGTFMGSALVVIGLYGVLWGKDREVSEKEEEREKVKQQNHKVKSESNEDIES 357

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  252 bits (644), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/364 (37%), Positives = 226/364 (62%), Gaps = 21/364 (5%)

Query: 9   PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT 68
           P+ AM+++Q GYAGMN  +K++L++GM   VLV YR   AT    PFA+F E K +PKIT
Sbjct: 18  PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKIT 77

Query: 69  WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIK 128
           + I  Q+F+  + G   +Q  Y++GL+ ++PT  CA++N+LPA+TF+LAV+FR E + +K
Sbjct: 78  FSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLK 137

Query: 129 TKPGQAKVFGTIICVGGAMVLSFYHG--------KTFGIPNSSIHWKYAEKMSEENSGNK 180
               QAK+ GT++ V GAM+++ Y G        K   I +SS    +A   S +NS + 
Sbjct: 138 KLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSS----HANTTSSKNSSSD 193

Query: 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPA-PYTCTTLMCLISSIMCSVIGLIVERK 239
              + GSI +I ++++WA+  ++Q K+ K +     + TTL+C I ++    +  ++E  
Sbjct: 194 KEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHN 253

Query: 240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL 299
            +AW++   + L++A YSGIV S++++ +    ++++GP++ + FSPL++VIVA++   +
Sbjct: 254 PSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFV 313

Query: 300 FQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDAESGDIGQQQLFCTR 359
             EK+F+G  IG+VLIV GLYAVLWGK KE    N +   EL K   +  + +       
Sbjct: 314 LAEKIFLGGVIGAVLIVIGLYAVLWGKQKE----NQVTICELAKIDSNSKVTED----VE 365

Query: 360 SNGN 363
           +NG+
Sbjct: 366 ANGS 369

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNA5|WTR39_ARATH WAT1-related protein At5g13670 OS=Arabidopsis thaliana GN=At5g13670 PE=2 SV=1

 Score =  251 bits (641), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 136/343 (39%), Positives = 217/343 (63%), Gaps = 6/343 (1%)

Query: 9   PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT 68
           PF+A+V +Q  YA M+  +KLAL+ GM P VLVAYR   A+    PFA  +E  TRPK+T
Sbjct: 8   PFIAIVFIQCLYALMSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILERNTRPKLT 67

Query: 69  WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIK 128
           + IL QI + S+      Q LY+ G++ +T T   AL N LPA+TF++A +F+ E V I+
Sbjct: 68  FKILLQIAILSLFEPVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFKLEKVTIE 127

Query: 129 TKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSI 188
            +  QAK+ GT++ +GGAM+++F  G    +P +S                ++++  GSI
Sbjct: 128 RRHSQAKLVGTMVAIGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQADIARGSI 187

Query: 189 AIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR-AAWKLNA 247
            ++AS  SW+ ++I+Q K+  ++ A  + T LMC++  +  +V+GLI ERK  + WK+N 
Sbjct: 188 MLVASCFSWSCYIILQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNMSVWKINP 247

Query: 248 TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIG 307
            + L++++Y G+V S LA+ +I W+ + +GP++VS F+PL +V+VAI+S  +F EK+++G
Sbjct: 248 DVTLLASIYGGLV-SGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVFLEKVYVG 306

Query: 308 TAIGSVLIVTGLYAVLWGKDKE----LKPDNVIVEPELTKDAE 346
             IGSV+IV G+Y VLWGK K+    L+P+    E  +  D +
Sbjct: 307 RVIGSVVIVIGIYLVLWGKSKDKGGMLQPNAGCAETVVKIDQQ 349

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  244 bits (622), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 128/334 (38%), Positives = 196/334 (58%), Gaps = 10/334 (2%)

Query: 5   DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR 64
           + L   +AM+T+Q GYAG +  S+ AL+ G+  LV   YR + A L  +PFAYF+E K R
Sbjct: 16  EKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKER 75

Query: 65  PKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEY 124
           P IT   L Q F  ++ G T NQ  Y +GL+N++PT   ++ N +PAITF++A + R E 
Sbjct: 76  PAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEK 135

Query: 125 VAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENS-----GN 179
           V I  + G +K+ GT +CV GA V++ Y G T   P S +H   A  ++  ++     GN
Sbjct: 136 VRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLH---AHLLTTNSAVLAPLGN 192

Query: 180 KS--NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVE 237
            +  N  LG I +I   +SW+ W++ Q  + K +PA  + T+  C    I   +I    E
Sbjct: 193 AAPKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCE 252

Query: 238 RKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSW 297
           R   AW  ++   L + LY+GIV S +AF + +W I R GP++V+V+ P+  ++VAI++ 
Sbjct: 253 RDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMAS 312

Query: 298 ALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELK 331
               E+ ++G  IG+VLI+ GLY VL+GK +E K
Sbjct: 313 IALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERK 346

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  241 bits (615), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 202/322 (62%), Gaps = 4/322 (1%)

Query: 9   PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT 68
           PF+ +V++Q GYAG++  +K AL+ GM P VL +YR + AT+   PFAYF++ K RPK+T
Sbjct: 8   PFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMT 67

Query: 69  WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIK 128
             I F+I L  +   T +Q LY+ G++ ++ T   A+TN+LPA  F++A IFR E V +K
Sbjct: 68  LSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVK 127

Query: 129 TKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSI 188
               QAK+ GTI+ VGGAM+++   G    +P ++ H  + +     N+G K +L  G+ 
Sbjct: 128 KIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQD---SSNTGVKQDLTKGAS 184

Query: 189 AIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR-AAWKLNA 247
            I    I WA ++ +Q    K +P   + T  +C + SI  +++ L +ER   +AW ++ 
Sbjct: 185 LIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHL 244

Query: 248 TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIG 307
             +L++A+Y G++CS + + +    ++ +GP++V+ F+PL +VIVAI+   +  E +F+G
Sbjct: 245 DSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFLG 304

Query: 308 TAIGSVLIVTGLYAVLWGKDKE 329
             +G+++IV GLY+VLWGK K+
Sbjct: 305 RILGAIVIVLGLYSVLWGKSKD 326

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  238 bits (607), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 210/365 (57%), Gaps = 18/365 (4%)

Query: 4   LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKT 63
           +D L P +A++++Q GYAGM   + ++   GM   +L  YR + AT+   PFA  +E K 
Sbjct: 6   MDKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKI 65

Query: 64  RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQE 123
           RPK+TWP+  +I          +Q LY++G++ ++ T   A  N LPAITF++AVIFR E
Sbjct: 66  RPKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIE 125

Query: 124 YVAIKTKPGQAKVFGTIICVGGAMVLSFYHG---KTFGIPNSSIHWKYAEKMSEENSGNK 180
            V +K     AKV GT I VGGAMV++ Y G   + F   +SS+H   +   SE      
Sbjct: 126 TVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTD--- 182

Query: 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR 240
            N + G++A++ S  +WA + I+Q+   KK+PA  +    +C + +++ ++  LI+ R  
Sbjct: 183 QNWVTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDV 242

Query: 241 AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALF 300
           +AWK+      ++A+YSG+VCS +A+ +    I+ +GP++ + FSP+ ++I A +   + 
Sbjct: 243 SAWKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVL 302

Query: 301 QEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDAESGDIGQQQLFCTRS 360
            EK+ +G+ IG++ IV GLY+V+WGK K    D VI   E         IG Q+L  T +
Sbjct: 303 AEKIHLGSIIGAIFIVFGLYSVVWGKAK----DEVISVEE--------KIGMQELPITNT 350

Query: 361 NGNIH 365
           +  + 
Sbjct: 351 STKVE 355

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  234 bits (598), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 210/342 (61%), Gaps = 14/342 (4%)

Query: 1   MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIE 60
           +RM +   P+ AMV +Q GYAGMN  +K  LD GM   VLVAYR  FAT A  PFA   E
Sbjct: 3   LRMSESAKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSE 62

Query: 61  WKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIF 120
            K R K+T+PI  +IFL ++ G   +Q LY++GL+ ++PT   A++NI+PAIT +LA +F
Sbjct: 63  RKVRSKMTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLF 122

Query: 121 RQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNK 180
           R E V ++      KV GT++ V G++++ FY G             +   ++  +S   
Sbjct: 123 RMEKVEMRKVRCLVKVMGTLVTVVGSILMIFYKGPFINF--------FRSHLTAASSPPT 174

Query: 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR 240
           ++ +  ++ ++ +S+SWA++ ++Q    KK+ A  + +T++C + ++    +  ++E   
Sbjct: 175 ADYLKAAVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNP 234

Query: 241 AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALF 300
           +A  +   + L+++ Y+GI+ S++A+ +    +QRKGP++V+ F+PL++VIV+I+S+ + 
Sbjct: 235 SALNIGFDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVL 294

Query: 301 QEKLFIGTAIGSVLIVTGLYAVLWGK------DKELKPDNVI 336
            + +++G  IG V+++ G+YAVLWGK      ++    DNV+
Sbjct: 295 GQGIYLGGVIGVVVLMVGVYAVLWGKHVDDDGEETRHEDNVV 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  234 bits (596), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 127/336 (37%), Positives = 206/336 (61%), Gaps = 5/336 (1%)

Query: 4   LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKT 63
           ++ + P LA++++Q GYAGM   + ++   GM   VL  YR + AT+   PFA   E K 
Sbjct: 6   MEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKI 65

Query: 64  RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQE 123
           RPK+T  I +++    +     +Q LY++GL+N++ +   A TN LPA+TF+LA+IFR E
Sbjct: 66  RPKMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLE 125

Query: 124 YVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNL 183
            V  +     AKV GT+I VGGAM+++ Y G    I  ++ H  +    S   +G   + 
Sbjct: 126 TVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAA-HNSFHGGSSSTPTGQ--HW 182

Query: 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW 243
           +LG+IAI+ S  +WAA+ I+Q+   K +PA  +  TL+C I +I+ ++  LI+ R  +AW
Sbjct: 183 VLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAW 242

Query: 244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEK 303
           K+      ++A+YSG+VCS +A+ +    I+++GP++ + FSP+ ++I A +   +  EK
Sbjct: 243 KIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEK 302

Query: 304 LFIGTAIGSVLIVTGLYAVLWGKDK-ELKP-DNVIV 337
           + +G+ IG+V IV GLY+V+WGK K E+ P D  IV
Sbjct: 303 IHLGSIIGAVFIVLGLYSVVWGKSKDEVNPLDEKIV 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LI65|WTR24_ARATH WAT1-related protein At3g30340 OS=Arabidopsis thaliana GN=At3g30340 PE=2 SV=1

 Score =  229 bits (584), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 204/359 (56%), Gaps = 8/359 (2%)

Query: 11  LAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWP 70
           L M  + +G + +N   K  +D G+  +V   YR    TL  IPFA F+E   RPK+T  
Sbjct: 13  LMMSMINIGLSVVNVMFKKMIDEGLNRMVATTYRLAVGTLFLIPFAIFLERHNRPKLTGR 72

Query: 71  ILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTK 130
           IL  +F  ++ G +  Q  + +GLE ++ T   A +N++P++TF LA++FRQE + IK+ 
Sbjct: 73  ILCSLFFSALLGTSLVQYFFLIGLEYTSSTFSLAFSNMVPSVTFALALVFRQETLNIKSN 132

Query: 131 PGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAI 190
            G+AK+ GT+IC+ GA+VL+ Y G      +S+ H +   + ++          +GSI +
Sbjct: 133 VGRAKLLGTMICICGALVLTLYKGTALSREHST-HMETHTR-TDSTGAMTQKWAMGSIML 190

Query: 191 IASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIR 250
           + S I W++W I+Q K+S+ +P  YT TT++     I  +++ LI ER  + W +    +
Sbjct: 191 VISIIIWSSWFIVQAKISRVYPCQYTSTTILSFFGVIQSALLSLISERSTSMWVVKDKFQ 250

Query: 251 LVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAI 310
           +++ LYSGIV S L +  + W ++++G ++ S F PL+ V  AI S++   E+++ G+ I
Sbjct: 251 VLALLYSGIVGSGLCYVGMSWCLRQRGAVFTSSFIPLIQVFAAIFSFSFLHEQIYCGSVI 310

Query: 311 GSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDAESGDIGQQQLFCTRSNGNIHHVEG 369
           GS++I+ GLY +LWGK K+ K  +V  +  L  D E      ++L     N   H V  
Sbjct: 311 GSMVIIVGLYILLWGKSKD-KSASVTKQEPLDLDIEGCGTAPKEL-----NSTAHQVSA 363

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  229 bits (583), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 208/367 (56%), Gaps = 12/367 (3%)

Query: 4   LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKT 63
           ++   PF++MV +Q+G AGM+  SK  L+ GM   VLV YR   AT+   PFA++ + K 
Sbjct: 10  MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query: 64  RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQE 123
           RPK+T  I F+I L  +     +Q LY++G++ +T T   A+ N+LPAITFVLA IF  E
Sbjct: 70  RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLE 129

Query: 124 YVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNL 183
            V ++      KV GT+  VGGAM+++   G     P   + W            +  + 
Sbjct: 130 RVKLRCIRSTGKVVGTLATVGGAMIMTLVKG-----PVLDLFWTKGVSAHNTAGTDIHSA 184

Query: 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR-AA 242
           I G++ +     S+A ++I+Q    + +PA  + T  +CL+ +I  + + L++E+   +A
Sbjct: 185 IKGAVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSA 244

Query: 243 WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQE 302
           W +    +L++A YSGIVCSALA+ +    ++ +GP++V+ FSPL ++IVAI+S  +F E
Sbjct: 245 WAIGWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAE 304

Query: 303 KLFIGTAIGSVLIVTGLYAVLWGKDKE------LKPDNVIVEPELTKDAESGDIGQQQLF 356
           ++++G  +G+V+I  GLY V+WGK K+      L+ D+   +P+L       D    ++ 
Sbjct: 305 QMYLGRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQPKLELSGNGKDNVDHEVI 364

Query: 357 CTRSNGN 363
                G 
Sbjct: 365 TISKQGE 371

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
224124406	367	predicted protein [Populus trichocarpa]	0.970	0.975	0.649	1e-134
255542972	370	Auxin-induced protein 5NG4, putative [Ri	0.975	0.972	0.630	1e-125
28932880	376	nodulin-like protein [Gossypium hirsutum	0.891	0.875	0.663	1e-125
297849242	375	hypothetical protein ARALYDRAFT_888180 [	0.875	0.861	0.654	1e-124
28932732	374	putative nodulin protein [Gossypium hirs	0.891	0.879	0.663	1e-124
15217505	374	nodulin MtN21 /EamA-like transporter pro	0.929	0.917	0.621	1e-124
449518081	371	PREDICTED: LOW QUALITY PROTEIN: auxin-in	0.986	0.981	0.596	1e-122
449443520	371	PREDICTED: auxin-induced protein 5NG4-li	0.986	0.981	0.596	1e-122
296089819	591	unnamed protein product [Vitis vinifera]	0.926	0.578	0.616	1e-121
225450508	356	PREDICTED: auxin-induced protein 5NG4 [V	0.926	0.960	0.616	1e-121

>gi|224124406|ref|XP_002330015.1| predicted protein [Populus trichocarpa] gi|222871440|gb|EEF08571.1| predicted protein [Populus trichocarpa]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/362 (64%), Positives = 281/362 (77%), Gaps = 4/362 (1%)

Query: 4   LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKT 63
           + D++PFLAM  VQ GYAGMN TSKLA+DSGMKPLVLV YRQ+FAT+A +PFAYF EWKT
Sbjct: 3   MADVLPFLAMAIVQFGYAGMNITSKLAMDSGMKPLVLVGYRQIFATIAMVPFAYFFEWKT 62

Query: 64  RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQE 123
           RPKIT  +L QIF+CS+TG TGNQV YF+GLENSTPTIGCALTNILPA+TF+LAV+FRQE
Sbjct: 63  RPKITMSLLLQIFICSLTGVTGNQVFYFIGLENSTPTIGCALTNILPAVTFILAVLFRQE 122

Query: 124 YVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNL 183
            V IK   GQAK+ GTI+CVGGAM+LSFYHG    I  SSIHW YA+     ++  KSNL
Sbjct: 123 SVGIKKTSGQAKLLGTIVCVGGAMLLSFYHGHMINIGESSIHWNYADSTGNSSTDKKSNL 182

Query: 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW 243
           +LGS+ IIAS++SWA W  +Q K+S KFPAPYTCT LMC + SI C VIG+    K + W
Sbjct: 183 VLGSLFIIASAVSWAIWFTVQAKVSLKFPAPYTCTLLMCFMGSIECGVIGIGANHKVSEW 242

Query: 244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEK 303
            L +  RL++ALY+GIVCSALAF L  WSIQRKG LYVSVFSPLLLVIVA++SWAL  EK
Sbjct: 243 SLRSPGRLIAALYAGIVCSALAFSLTSWSIQRKGALYVSVFSPLLLVIVAVLSWALLHEK 302

Query: 304 LFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTK--DAESGDIGQQQLFCTRSN 361
           +++GTA+GS+LIV GLYAVLWGKDKELK +  I E ++ K  + E  +   +      SN
Sbjct: 303 IYVGTAVGSILIVAGLYAVLWGKDKELKEE--IEETKVMKIGNKEWNNHDLELQLHAISN 360

Query: 362 GN 363
           GN
Sbjct: 361 GN 362

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542972|ref|XP_002512549.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223548510|gb|EEF50001.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/368 (63%), Positives = 279/368 (75%), Gaps = 8/368 (2%)

Query: 1   MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIE 60
           M  ++D  PFLAMV VQ G+AGMN TSKLA+DSGMKPLVLV+YRQ+FAT+A +PFAYF E
Sbjct: 1   MDAVNDFFPFLAMVIVQFGFAGMNITSKLAMDSGMKPLVLVSYRQIFATIAMVPFAYFFE 60

Query: 61  WKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIF 120
           WKTRPKIT P+L QIF+CS+TG TGNQV YF+GLENSTPTIGCALTNILPA+TF+LAV+ 
Sbjct: 61  WKTRPKITKPLLIQIFICSLTGVTGNQVFYFIGLENSTPTIGCALTNILPAVTFILAVLL 120

Query: 121 RQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMS-EENSGN 179
           RQE V IK   GQAK+ GT+ICVGGAM+LSFYHG    I  SSIHWKYA++     ++  
Sbjct: 121 RQESVGIKKISGQAKLLGTVICVGGAMLLSFYHGPMINIGESSIHWKYADETGSSNSAAA 180

Query: 180 KSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERK 239
           KS+ ILG + I+AS++SWA W  +Q K+S  FPAPYT T LMC + SI C VIGL    +
Sbjct: 181 KSSFILGPVFIMASAVSWAVWFTLQAKVSVTFPAPYTSTLLMCFMGSIECVVIGLGANHE 240

Query: 240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL 299
            + W L +  RL++ALY+GIVCSALAF L  WSIQ+KG LYVSVFSPLLLVIVA++SWAL
Sbjct: 241 LSQWSLRSPGRLIAALYAGIVCSALAFSLTSWSIQKKGALYVSVFSPLLLVIVAVLSWAL 300

Query: 300 FQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKDA----ESGDIGQQQL 355
            +EKL++GT +GS LIV GLYAVLWGKDKE+K    I + E  K      E GD+  Q  
Sbjct: 301 LREKLYLGTVVGSGLIVAGLYAVLWGKDKEMKMKG-IEDIEAIKQGGGKEERGDLELQ-- 357

Query: 356 FCTRSNGN 363
               SNG+
Sbjct: 358 LPANSNGS 365

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|28932880|gb|AAO60108.1| nodulin-like protein [Gossypium hirsutum]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/330 (66%), Positives = 271/330 (82%), Gaps = 1/330 (0%)

Query: 3   MLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK 62
           ML D MPFLA V +Q+GYAGMN TSKLAL+SGMKPL+LVAYRQ+FATLA  PFA+F+E K
Sbjct: 1   MLADFMPFLANVLLQVGYAGMNITSKLALESGMKPLILVAYRQIFATLAIAPFAFFLERK 60

Query: 63  TRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQ 122
           TRPK+T PILFQIFLCS+TGAT NQV YFVGL+N+T TI CAL N+LPA TF+LA I RQ
Sbjct: 61  TRPKLTMPILFQIFLCSLTGATANQVFYFVGLQNTTATIACALNNVLPAATFLLAAICRQ 120

Query: 123 EYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMS-EENSGNKS 181
           E V IK   GQAKV GT++CVGGAM+LSFYHG   GI  SSIHW YA KM+    S + S
Sbjct: 121 EAVGIKKASGQAKVIGTLVCVGGAMLLSFYHGHIIGIGESSIHWNYANKMANSSPSPSGS 180

Query: 182 NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA 241
           N  LG   ++AS+++WA W IIQ + SK FPAPYT TTLMC ++SI C++IG+  + K +
Sbjct: 181 NFFLGPFLVMASAVAWALWFIIQGQTSKSFPAPYTSTTLMCFMASIECTIIGIFSDPKPS 240

Query: 242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQ 301
           AW L++++RL++ALY+GI+C+A+AFC++ W IQ++GPLYVSVFSPLLLVIVAI+SWAL +
Sbjct: 241 AWSLSSSMRLIAALYAGIICNAVAFCVMSWCIQKRGPLYVSVFSPLLLVIVAILSWALLR 300

Query: 302 EKLFIGTAIGSVLIVTGLYAVLWGKDKELK 331
           EKL++GT +GS+LIV GLYAVLWGKDKE+K
Sbjct: 301 EKLYVGTVVGSLLIVGGLYAVLWGKDKEMK 330

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849242|ref|XP_002892502.1| hypothetical protein ARALYDRAFT_888180 [Arabidopsis lyrata subsp. lyrata] gi|297338344|gb|EFH68761.1| hypothetical protein ARALYDRAFT_888180 [Arabidopsis lyrata subsp. lyrata]

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/324 (65%), Positives = 262/324 (80%), Gaps = 1/324 (0%)

Query: 5   DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR 64
            D++PFLAMV VQ+GYAGMN TSK+A+++GMKPL+LVAYRQ+FAT+AT P A+F+E KTR
Sbjct: 4   SDMLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTR 63

Query: 65  PKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEY 124
           PKIT  +L Q+F CS+TGATGNQVLYF+GL+NS+PTI CALTN+LPA+TF+LA IFRQE 
Sbjct: 64  PKITLRVLVQVFFCSITGATGNQVLYFIGLQNSSPTIACALTNLLPAVTFLLAAIFRQET 123

Query: 125 VAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGN-KSNL 183
           V IK   GQAKV GT++CV GAMVLSFYHG T GI  S IHW YAE ++ + S +  SN 
Sbjct: 124 VGIKKASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITRQGSSSAHSNF 183

Query: 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW 243
            LG   I+A+++SWAAW IIQTK+S+ F APYT T LMCL+ SI C  I LI + K + W
Sbjct: 184 FLGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHKLSDW 243

Query: 244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEK 303
            L++ +R +SALY+G+V SALAFCL+ W++QRKGPLYVSVFSPLLLV+VAI SWAL +EK
Sbjct: 244 SLSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEK 303

Query: 304 LFIGTAIGSVLIVTGLYAVLWGKD 327
           L+ GT +GS L+V GLY VLWGKD
Sbjct: 304 LYTGTFMGSALVVIGLYGVLWGKD 327

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|28932732|gb|AAO60157.1| putative nodulin protein [Gossypium hirsutum]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/330 (66%), Positives = 270/330 (81%), Gaps = 1/330 (0%)

Query: 3   MLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK 62
           ML D MPFLA V +Q+GYAGMN TSKLAL+SGMKPL+LVAYRQ+FATLA  PFA+F+E K
Sbjct: 1   MLADFMPFLANVLLQVGYAGMNITSKLALESGMKPLILVAYRQIFATLAIAPFAFFLERK 60

Query: 63  TRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQ 122
           TRPK+T PILFQIFLCS+TGAT NQV YFVGL+N+T TI CAL N+LPA TF+LA I RQ
Sbjct: 61  TRPKLTMPILFQIFLCSLTGATANQVFYFVGLQNTTATIACALNNVLPAATFLLAAICRQ 120

Query: 123 EYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMS-EENSGNKS 181
           E V IK   GQAKV GT+ CVGGAM+LSFYHG   GI  SSIHW YA KM+    S + S
Sbjct: 121 EAVGIKKASGQAKVIGTLACVGGAMLLSFYHGHIIGIGESSIHWNYANKMANSSPSPSGS 180

Query: 182 NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA 241
           N  LG   ++AS+++WA W IIQ + SK FPAPYT TTLMC ++SI C++IG+  + K +
Sbjct: 181 NFFLGPFLVMASAVAWALWFIIQGQTSKSFPAPYTSTTLMCFMASIECTIIGIFSDPKPS 240

Query: 242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQ 301
           AW L++++RL++ALY+GI+C+A+AFC++ W IQ++GPLYVSVFSPLLLVIVAI+SWAL +
Sbjct: 241 AWSLSSSMRLIAALYAGIICNAVAFCVMSWCIQKRGPLYVSVFSPLLLVIVAILSWALLR 300

Query: 302 EKLFIGTAIGSVLIVTGLYAVLWGKDKELK 331
           EKL++GT +GS+LIV GLYAVLWGKDKE+K
Sbjct: 301 EKLYVGTVVGSLLIVGGLYAVLWGKDKEMK 330

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217505|ref|NP_172409.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|26451692|dbj|BAC42941.1| putative nodulin protein N21 [Arabidopsis thaliana] gi|28973473|gb|AAO64061.1| putative nodulin protein, N21 [Arabidopsis thaliana] gi|332190314|gb|AEE28435.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/354 (62%), Positives = 273/354 (77%), Gaps = 11/354 (3%)

Query: 5   DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR 64
            D++PFLAMV VQ+GYAGMN TSK+A+++GMKPL+LVAYRQ+FAT+AT P A+F+E KTR
Sbjct: 4   SDMLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTR 63

Query: 65  PKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEY 124
           PKIT  IL Q+F CS+TGATGNQVLYFVGL+NS+PTI CALTN+LPA+TF+LA IFRQE 
Sbjct: 64  PKITLRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQET 123

Query: 125 VAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEE-NSGNKSNL 183
           V IK   GQAKV GT++CV GAMVLSFYHG T GI  S IHW YAE +++  +S   SN 
Sbjct: 124 VGIKKASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKHGSSSGHSNF 183

Query: 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW 243
            LG   I+A+++SWAAW IIQTK+S+ F APYT T LMCL+ SI C  I LI +   + W
Sbjct: 184 FLGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDW 243

Query: 244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEK 303
            L++ +R +SALY+G+V SALAFCL+ W++QRKGPLYVSVFSPLLLV+VAI SWAL +EK
Sbjct: 244 SLSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEK 303

Query: 304 LFIGTAIGSVLIVTGLYAVLWGKD----------KELKPDNVIVEPELTKDAES 347
           L+ GT +GS L+V GLY VLWGKD          +++K  N  V+ E  +D ES
Sbjct: 304 LYTGTFMGSALVVIGLYGVLWGKDREVSEKEEEREKVKQQNHKVKSESNEDIES 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518081|ref|XP_004166072.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/372 (59%), Positives = 271/372 (72%), Gaps = 8/372 (2%)

Query: 1   MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIE 60
           M    D +P L M+ VQ  YAG+N TSKLA++ GM PLVLVAYRQMFAT+A  P AY+ E
Sbjct: 1   MAAAGDFLPXLVMLVVQFLYAGLNITSKLAMEFGMNPLVLVAYRQMFATIAIAPCAYWFE 60

Query: 61  WKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIF 120
            K RPKIT PILFQI LCS+TGAT NQV Y+VGL+ STPTI CALTN+LPA TFVLAV+F
Sbjct: 61  RKGRPKITKPILFQILLCSLTGATANQVFYYVGLKYSTPTIACALTNVLPAATFVLAVLF 120

Query: 121 RQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNK 180
           RQE V IKT PG AKV GT++CVGGAM+LSFY G+T  +  S IHWKYAE M  E+S N+
Sbjct: 121 RQESVGIKTSPGAAKVIGTVVCVGGAMLLSFYRGQTIELGKSGIHWKYAELMRGESSSNQ 180

Query: 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR 240
            + I GS+ +I SS++WAAW +IQ ++++KFPAPYT T LM  +++I C  I + VE K 
Sbjct: 181 GSSIWGSLCLIISSVAWAAWFVIQARVNEKFPAPYTSTALMTFMATIQCGAIAVGVEHKT 240

Query: 241 -AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL 299
            AAW L ++IRLV ALY+G+ CS +AFCL  WSIQ++GPLY SVFSP LLVIVAI SWA 
Sbjct: 241 LAAWSLKSSIRLVGALYAGVACSGMAFCLTSWSIQKRGPLYASVFSPFLLVIVAIFSWAF 300

Query: 300 FQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVI-----VEPELTKDAESGDIGQQQ 354
           FQEKL++GT +GS+LIV GLY+VLWGK KE+K    I      E +L       D+ +Q 
Sbjct: 301 FQEKLYVGTVVGSLLIVVGLYSVLWGKTKEVKLQQHIEMTAAAEAKLDDYNNKEDLEEQS 360

Query: 355 LFCTRSNGNIHH 366
                SN NI H
Sbjct: 361 YVV--SNANIPH 370

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443520|ref|XP_004139525.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/372 (59%), Positives = 271/372 (72%), Gaps = 8/372 (2%)

Query: 1   MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIE 60
           M    D +P L M+ VQ  YAG+N TSKLA++ GM PLVLVAYRQMFAT+A  P AY+ E
Sbjct: 1   MAAAGDFLPPLVMLVVQFLYAGLNITSKLAMEFGMNPLVLVAYRQMFATIAIAPCAYWFE 60

Query: 61  WKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIF 120
            K RPKIT PILFQI LCS+TGAT NQV Y+VGL+ STPTI CALTN+LPA TFVLAV+F
Sbjct: 61  RKGRPKITKPILFQILLCSLTGATANQVFYYVGLKYSTPTIACALTNVLPAATFVLAVLF 120

Query: 121 RQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNK 180
           RQE V IKT PG AKV GT++CVGGAM+LSFY G+T  +  S IHWKYAE M  E+S N+
Sbjct: 121 RQESVGIKTSPGAAKVIGTVVCVGGAMLLSFYRGQTIELGKSGIHWKYAELMRGESSSNQ 180

Query: 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR 240
            + I GS+ +I SS++WAAW +IQ ++++KFPAPYT T LM  +++I C  I + VE K 
Sbjct: 181 GSSIWGSLCLIISSVAWAAWFVIQARVNEKFPAPYTSTALMTFMATIQCGAIAVGVEHKT 240

Query: 241 -AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL 299
            AAW L ++IRLV ALY+G+ CS +AFCL  WSIQ++GPLY SVFSP LLVIVAI SWA 
Sbjct: 241 LAAWSLKSSIRLVGALYAGVACSGMAFCLTSWSIQKRGPLYASVFSPFLLVIVAIFSWAF 300

Query: 300 FQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVI-----VEPELTKDAESGDIGQQQ 354
           FQEKL++GT +GS+LIV GLY+VLWGK KE+K    I      E +L       D+ +Q 
Sbjct: 301 FQEKLYVGTVVGSLLIVVGLYSVLWGKTKEVKLQQHIEMTAAAEAKLDDYNNKEDLEEQS 360

Query: 355 LFCTRSNGNIHH 366
                SN NI H
Sbjct: 361 YVV--SNANIPH 370

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089819|emb|CBI39638.3| unnamed protein product [Vitis vinifera]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/342 (61%), Positives = 261/342 (76%)

Query: 3   MLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK 62
           M  D +PFLAM  VQ+GYAGMN   KLA+DSGM P +LVAYRQ+FAT+A IPFAYF+E K
Sbjct: 1   MGGDYLPFLAMFLVQMGYAGMNIFVKLAMDSGMNPFILVAYRQIFATVAMIPFAYFLERK 60

Query: 63  TRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQ 122
           TRPKIT  +LFQ FL S+ GAT NQ+LYF+GL++S PT+GCA  N+ PA+TF+LAV FR 
Sbjct: 61  TRPKITRIVLFQAFLSSIFGATLNQILYFIGLKHSNPTLGCAFNNLFPAMTFLLAVPFRL 120

Query: 123 EYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSN 182
           E V IKT+PGQAKV GT++C+GGAM+L+FY G    I  S IHWKYAE++   +S + +N
Sbjct: 121 ETVGIKTRPGQAKVLGTVVCIGGAMILTFYRGHAINIGESGIHWKYAEQLKTRDSQSGAN 180

Query: 183 LILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAA 242
            ILG   +I S ISWA W IIQ ++  KF APYT +TLMC ++SI C VIGL V+ + +A
Sbjct: 181 FILGPFLLITSCISWAIWFIIQGRMCVKFAAPYTSSTLMCFMASIECGVIGLFVDHQPSA 240

Query: 243 WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQE 302
           W LN +IRL++ALYS IVC+ALAFCL+ W+IQRKGPLYVSVFSPLLLVIVAI+SWAL ++
Sbjct: 241 WSLNDSIRLIAALYSAIVCTALAFCLMSWTIQRKGPLYVSVFSPLLLVIVAILSWALLRD 300

Query: 303 KLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKD 344
           KL  GT +GS+ +V GLYAVLWGK KE        E E  K+
Sbjct: 301 KLHFGTVVGSLFVVLGLYAVLWGKGKEENQRGSREEAEEGKE 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450508|ref|XP_002277072.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/342 (61%), Positives = 261/342 (76%)

Query: 3   MLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK 62
           M  D +PFLAM  VQ+GYAGMN   KLA+DSGM P +LVAYRQ+FAT+A IPFAYF+E K
Sbjct: 1   MGGDYLPFLAMFLVQMGYAGMNIFVKLAMDSGMNPFILVAYRQIFATVAMIPFAYFLERK 60

Query: 63  TRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQ 122
           TRPKIT  +LFQ FL S+ GAT NQ+LYF+GL++S PT+GCA  N+ PA+TF+LAV FR 
Sbjct: 61  TRPKITRIVLFQAFLSSIFGATLNQILYFIGLKHSNPTLGCAFNNLFPAMTFLLAVPFRL 120

Query: 123 EYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSN 182
           E V IKT+PGQAKV GT++C+GGAM+L+FY G    I  S IHWKYAE++   +S + +N
Sbjct: 121 ETVGIKTRPGQAKVLGTVVCIGGAMILTFYRGHAINIGESGIHWKYAEQLKTRDSQSGAN 180

Query: 183 LILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAA 242
            ILG   +I S ISWA W IIQ ++  KF APYT +TLMC ++SI C VIGL V+ + +A
Sbjct: 181 FILGPFLLITSCISWAIWFIIQGRMCVKFAAPYTSSTLMCFMASIECGVIGLFVDHQPSA 240

Query: 243 WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQE 302
           W LN +IRL++ALYS IVC+ALAFCL+ W+IQRKGPLYVSVFSPLLLVIVAI+SWAL ++
Sbjct: 241 WSLNDSIRLIAALYSAIVCTALAFCLMSWTIQRKGPLYVSVFSPLLLVIVAILSWALLRD 300

Query: 303 KLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTKD 344
           KL  GT +GS+ +V GLYAVLWGK KE        E E  K+
Sbjct: 301 KLHFGTVVGSLFVVLGLYAVLWGKGKEENQRGSREEAEEGKE 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
TAIR|locus:2012255	374	UMAMIT25 "Usually multiple aci	0.880	0.868	0.628	7.8e-110
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.907	0.833	0.376	2.7e-61
TAIR|locus:2173189	377	UMAMIT15 "Usually multiple aci	0.867	0.848	0.388	2.5e-58
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.861	0.850	0.363	1.7e-57
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.886	0.840	0.371	1.4e-55
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.848	0.912	0.379	2.1e-54
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.875	0.865	0.349	3.4e-54
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.897	0.894	0.354	7e-54
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.883	0.857	0.357	1.5e-53
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.411	0.390	0.447	1.6e-53

TAIR|locus:2012255 UMAMIT25 "Usually multiple acids move in and out Transporters 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
 Identities = 205/326 (62%), Positives = 251/326 (76%)

Query:     6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP 65
             D++PFLAMV VQ+GYAGMN TSK+A+++GMKPL+LVAYRQ+FAT+AT P A+F+E KTRP
Sbjct:     5 DMLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRP 64

Query:    66 KITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYV 125
             KIT  IL Q+F CS+TGATGNQVLYFVGL+NS+PTI CALTN+LPA+TF+LA IFRQE V
Sbjct:    65 KITLRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQETV 124

Query:   126 AIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGN-KSNLI 184
              IK   GQAKV GT++CV GAMVLSFYHG T GI  S IHW YAE +++  S +  SN  
Sbjct:   125 GIKKASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKHGSSSGHSNFF 184

Query:   185 LGXXXXXXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWK 244
             LG                 QTK+S+ F APYT T LMCL+ SI C  I LI +   + W 
Sbjct:   185 LGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDWS 244

Query:   245 LNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKL 304
             L++ +R +SALY+G+V SALAFCL+ W++QRKGPLYVSVFSPLLLV+VAI SWAL +EKL
Sbjct:   245 LSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEKL 304

Query:   305 FIGTAIGSVLIVTGLYAVLWGKDKEL 330
             + GT +GS L+V GLY VLWGKD+E+
Sbjct:   305 YTGTFMGSALVVIGLYGVLWGKDREV 330

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 130/345 (37%), Positives = 207/345 (60%)

Query:     9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT 68
             P+ AM+++Q GYAGMN  +K++L++GM   VLV YR   AT    PFA+F E K +PKIT
Sbjct:    18 PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKIT 77

Query:    69 WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIK 128
             + I  Q+F+  + G   +Q  Y++GL+ ++PT  CA++N+LPA+TF+LAV+FR E + +K
Sbjct:    78 FSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLK 137

Query:   129 TKPGQAKVFGTIICVGGAMVLSFYHG---KTFGIPNSSIH-WKYAEKMSEENSGNKSNLI 184
                 QAK+ GT++ V GAM+++ Y G   + F      I    +A   S +NS +    +
Sbjct:   138 KLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFL 197

Query:   185 LGXXXXXXXXXXXXXXXXXQTKLSKKFPA-PYTCTTLMCLISSIMCSVIGLIVERKRAAW 243
              G                 Q K+ K +     + TTL+C I ++    +  ++E   +AW
Sbjct:   198 KGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAW 257

Query:   244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEK 303
             ++   + L++A YSGIV S++++ +    ++++GP++ + FSPL++VIVA++   +  EK
Sbjct:   258 RIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEK 317

Query:   304 LFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIVEPELTK-DAES 347
             +F+G  IG+VLIV GLYAVLWGK KE    N +   EL K D+ S
Sbjct:   318 IFLGGVIGAVLIVIGLYAVLWGKQKE----NQVTICELAKIDSNS 358

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173189 UMAMIT15 "Usually multiple acids move in and out Transporters 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 125/322 (38%), Positives = 196/322 (60%)

Query:     9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT 68
             PF+A+V +Q  YA M+  +KLAL+ GM P VLVAYR   A+    PFA  +E  TRPK+T
Sbjct:     8 PFIAIVFIQCLYALMSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILERNTRPKLT 67

Query:    69 WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIK 128
             + IL QI + S+      Q LY+ G++ +T T   AL N LPA+TF++A +F+ E V I+
Sbjct:    68 FKILLQIAILSLFEPVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFKLEKVTIE 127

Query:   129 TKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGXX 188
              +  QAK+ GT++ +GGAM+++F  G    +P +S                ++++  G  
Sbjct:   128 RRHSQAKLVGTMVAIGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQADIARGSI 187

Query:   189 XXXXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR-AAWKLNA 247
                            Q K+  ++ A  + T LMC++  +  +V+GLI ERK  + WK+N 
Sbjct:   188 MLVASCFSWSCYIILQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNMSVWKINP 247

Query:   248 TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIG 307
              + L++++Y G+V S LA+ +I W+ + +GP++VS F+PL +V+VAI+S  +F EK+++G
Sbjct:   248 DVTLLASIYGGLV-SGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVFLEKVYVG 306

Query:   308 TAIGSVLIVTGLYAVLWGKDKE 329
               IGSV+IV G+Y VLWGK K+
Sbjct:   307 RVIGSVVIVIGIYLVLWGKSKD 328

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 117/322 (36%), Positives = 194/322 (60%)

Query:     9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT 68
             PF+ +V++Q GYAG++  +K AL+ GM P VL +YR + AT+   PFAYF++ K RPK+T
Sbjct:     8 PFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMT 67

Query:    69 WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIK 128
               I F+I L  +   T +Q LY+ G++ ++ T   A+TN+LPA  F++A IFR E V +K
Sbjct:    68 LSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVK 127

Query:   129 TKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGXX 188
                 QAK+ GTI+ VGGAM+++   G    +P ++ H  + +     N+G K +L  G  
Sbjct:   128 KIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDS---SNTGVKQDLTKGAS 184

Query:   189 XXXXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR-AAWKLNA 247
                            Q    K +P   + T  +C + SI  +++ L +ER   +AW ++ 
Sbjct:   185 LIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHL 244

Query:   248 TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIG 307
               +L++A+Y G++CS + + +    ++ +GP++V+ F+PL +VIVAI+   +  E +F+G
Sbjct:   245 DSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFLG 304

Query:   308 TAIGSVLIVTGLYAVLWGKDKE 329
               +G+++IV GLY+VLWGK K+
Sbjct:   305 RILGAIVIVLGLYSVLWGKSKD 326

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 123/331 (37%), Positives = 183/331 (55%)

Query:     5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR 64
             + L   +AM+T+Q GYAG +  S+ AL+ G+  LV   YR + A L  +PFAYF+E K R
Sbjct:    16 EKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKER 75

Query:    65 PKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEY 124
             P IT   L Q F  ++ G T NQ  Y +GL+N++PT   ++ N +PAITF++A + R E 
Sbjct:    76 PAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEK 135

Query:   125 VAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENS--GNKS- 181
             V I  + G +K+ GT +CV GA V++ Y G T   P S +H       S   +  GN + 
Sbjct:   136 VRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAP 195

Query:   182 -NLILGXXXXXXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR 240
              N  LG                 Q  + K +PA  + T+  C    I   +I    ER  
Sbjct:   196 KNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDS 255

Query:   241 AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALF 300
              AW  ++   L + LY+GIV S +AF + +W I R GP++V+V+ P+  ++VAI++    
Sbjct:   256 QAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIAL 315

Query:   301 QEKLFIGTAIGSVLIVTGLYAVLWGKDKELK 331
              E+ ++G  IG+VLI+ GLY VL+GK +E K
Sbjct:   316 GEEFYLGGIIGAVLIIAGLYFVLYGKSEERK 346

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 121/319 (37%), Positives = 184/319 (57%)

Query:    11 LAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWP 70
             +AMV VQ+ YAGM   SK+A+  G  P V V YRQ FA LA  PFA+F+E      +++ 
Sbjct:     9 MAMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSSPLSFI 68

Query:    71 ILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTK 130
             +L +IF  S+ G T +  LY+V +EN+T T   A TN +P+ITFVLA++FR E V +K  
Sbjct:    69 LLLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRLETVTLKKS 128

Query:   131 PGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGXXXX 190
              G AKV G+++ + GA+V +F  G     P+   H+  +  +      +  N + G    
Sbjct:   129 HGVAKVTGSMVGMLGALVFAFVKG-----PSLINHYN-SSTIPNGTVPSTKNSVKGSITM 182

Query:   191 XXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIR 250
                          Q+K+ K++PA      L CL S I  +V  + V R  + WK+   + 
Sbjct:   183 LAANTCWCLWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNPSVWKIEFGLP 242

Query:   251 LVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAI 310
             L+S  Y GI+ + L + L VW+I++KGP++ ++++PL L++  IVS  LF+E  ++G+  
Sbjct:   243 LLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLFKETFYLGSVG 302

Query:   311 GSVLIVTGLYAVLWGKDKE 329
             G+VL+V GLY  LWGK KE
Sbjct:   303 GAVLLVCGLYLGLWGKTKE 321

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 115/329 (34%), Positives = 186/329 (56%)

Query:     4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKT 63
             +D L P +A++++Q GYAGM   + ++   GM   +L  YR + AT+   PFA  +E K 
Sbjct:     6 MDKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKI 65

Query:    64 RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQE 123
             RPK+TWP+  +I          +Q LY++G++ ++ T   A  N LPAITF++AVIFR E
Sbjct:    66 RPKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIE 125

Query:   124 YVAIKTKPGQAKVFGTIICVGGAMVLSFYHG---KTFGIPNSSIHWKYAEKMSEENSGNK 180
              V +K     AKV GT I VGGAMV++ Y G   + F   +SS+H   +   SE      
Sbjct:   126 TVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTD--- 182

Query:   181 SNLILGXXXXXXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR 240
              N + G                 Q+   KK+PA  +    +C + +++ ++  LI+ R  
Sbjct:   183 QNWVTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDV 242

Query:   241 AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALF 300
             +AWK+      ++A+YSG+VCS +A+ +    I+ +GP++ + FSP+ ++I A +   + 
Sbjct:   243 SAWKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVL 302

Query:   301 QEKLFIGTAIGSVLIVTGLYAVLWGKDKE 329
              EK+ +G+ IG++ IV GLY+V+WGK K+
Sbjct:   303 AEKIHLGSIIGAIFIVFGLYSVVWGKAKD 331

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 119/336 (35%), Positives = 193/336 (57%)

Query:     4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKT 63
             ++ + P LA++++Q GYAGM   + ++   GM   VL  YR + AT+   PFA   E K 
Sbjct:     6 MEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKI 65

Query:    64 RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQE 123
             RPK+T  I +++    +     +Q LY++GL+N++ +   A TN LPA+TF+LA+IFR E
Sbjct:    66 RPKMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLE 125

Query:   124 YVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNL 183
              V  +     AKV GT+I VGGAM+++ Y G    I  ++ H  +    S   +G   + 
Sbjct:   126 TVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAA-HNSFHGGSSSTPTGQ--HW 182

Query:   184 ILGXXXXXXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW 243
             +LG                 Q+   K +PA  +  TL+C I +I+ ++  LI+ R  +AW
Sbjct:   183 VLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAW 242

Query:   244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEK 303
             K+      ++A+YSG+VCS +A+ +    I+++GP++ + FSP+ ++I A +   +  EK
Sbjct:   243 KIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEK 302

Query:   304 LFIGTAIGSVLIVTGLYAVLWGKDK-ELKP-DNVIV 337
             + +G+ IG+V IV GLY+V+WGK K E+ P D  IV
Sbjct:   303 IHLGSIIGAVFIVLGLYSVVWGKSKDEVNPLDEKIV 338

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 120/336 (35%), Positives = 194/336 (57%)

Query:     4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKT 63
             ++   PF++MV +Q+G AGM+  SK  L+ GM   VLV YR   AT+   PFA++ + K 
Sbjct:    10 MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query:    64 RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQE 123
             RPK+T  I F+I L  +     +Q LY++G++ +T T   A+ N+LPAITFVLA IF  E
Sbjct:    70 RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLE 129

Query:   124 YVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKS-- 181
              V ++      KV GT+  VGGAM+++   G     P   + W   + +S  N+      
Sbjct:   130 RVKLRCIRSTGKVVGTLATVGGAMIMTLVKG-----PVLDLFW--TKGVSAHNTAGTDIH 182

Query:   182 NLILGXXXXXXXXXXXXXXXXXQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR- 240
             + I G                 Q    + +PA  + T  +CL+ +I  + + L++E+   
Sbjct:   183 SAIKGAVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNP 242

Query:   241 AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALF 300
             +AW +    +L++A YSGIVCSALA+ +    ++ +GP++V+ FSPL ++IVAI+S  +F
Sbjct:   243 SAWAIGWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIF 302

Query:   301 QEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVI 336
              E++++G  +G+V+I  GLY V+WGK K+ K ++ +
Sbjct:   303 AEQMYLGRVLGAVVICAGLYLVIWGKGKDYKYNSTL 338

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 68/152 (44%), Positives = 92/152 (60%)

Query:     3 MLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK 62
             +++ L P+LAM+++Q GYAGM   + ++L  GM   VL  YR   AT    PFA F E K
Sbjct:     5 LMNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERK 64

Query:    63 TRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQ 122
              RPK+T+ I  QI L        +Q LY+VG+  ++ T   A  N+LPAITFVLA+IFR 
Sbjct:    65 IRPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRL 124

Query:   123 EYVAIKTKPGQAKVFGTIICVGGAMVLSFYHG 154
             E V  K     AKV GT+I V GA++++ Y G
Sbjct:   125 ESVNFKKVRSIAKVVGTVITVSGALLMTLYKG 156

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GXB4	WTR2_ARATH	No assigned EC number	0.6214	0.9295	0.9171	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.01310062	hypothetical protein (367 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.33370002	hypothetical protein (388 aa)			•						0.407

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	369
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-49
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	5e-14
pfam00892	126	pfam00892, EamA, EamA-like transporter family	5e-11
pfam00892	126	pfam00892, EamA, EamA-like transporter family	9e-07
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	2e-04
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	8e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  169 bits (430), Expect = 2e-49
 Identities = 100/322 (31%), Positives = 181/322 (56%), Gaps = 5/322 (1%)

Query: 12  AMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEW-KTRPKITWP 70
           AM+  +    G++   K+A   G+     + Y  + A+L  +P  +F    ++ P ++  
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 71  ILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTK 130
           IL +I L    G+    +  ++G+E S PT+  A++NI PA+TF+LA+IFR E V+ K +
Sbjct: 77  ILSKIGLLGFLGSM-YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER 135

Query: 131 PGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAI 190
              AKV GTI+ + GA+V+ FYHG    + +S  +  +  ++S   S + S+ ++G   +
Sbjct: 136 SSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNF-RQLSPPLSSSNSDWLIGGALL 194

Query: 191 IASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR-AAWKLNATI 249
               I  +   I+Q  +  ++PA +T + L  +  SI+ S+IGL+VE+   + W ++  I
Sbjct: 195 TIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI 254

Query: 250 RLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTA 309
            L++ +   I+ S + + +  W+++ KGPLY+++F PL ++I  ++      + L++G  
Sbjct: 255 TLITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCL 313

Query: 310 IGSVLIVTGLYAVLWGKDKELK 331
           IG +LI  G YAV+WGK  E K
Sbjct: 314 IGGILITLGFYAVMWGKANEEK 335

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 71.4 bits (175), Expect = 5e-14
 Identities = 57/327 (17%), Positives = 122/327 (37%), Gaps = 36/327 (11%)

Query: 3   MLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK 62
               L+  LA++   L +       KLA++S    L   A R + A L  +P        
Sbjct: 2   KRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL--EP 59

Query: 63  TRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQ 122
              +        + L ++ G     +L F+ L+ ++ ++   +  +LP  T +LAV+   
Sbjct: 60  RGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL 119

Query: 123 EYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSN 182
                  +    ++ G ++ + G +++    G                            
Sbjct: 120 -----GERLSLLQILGILLALAGVLLILLGGGGGG-----------------------IL 151

Query: 183 LILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAA 242
            +LG +  +A+++ WA +  +  +LS+          L  L++ ++  +  L        
Sbjct: 152 SLLGLLLALAAALLWALYTALVKRLSR-LGPVTLALLLQLLLALLLLLLFFLSGFGAPIL 210

Query: 243 WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQE 302
            +    +     LY G+  + LA+ L  ++++  G   V++ S L  V  A++   L  E
Sbjct: 211 SRAWLLL-----LYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE 265

Query: 303 KLFIGTAIGSVLIVTGLYAVLWGKDKE 329
            L     +G+ L+V G+        + 
Sbjct: 266 PLSPAQLLGAALVVLGVLLASLRARRR 292

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 4/130 (3%)

Query: 195 ISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSA 254
           +SWA + +   KL ++   P T T    LI+ I+  ++  ++ +  A   L A + L   
Sbjct: 1   LSWALYFVFSKKLLERIS-PLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILAL--- 56

Query: 255 LYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVL 314
           LY G+  +AL + L  ++++       SV + L  V   I+S  L  EKL +   +G VL
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 315 IVTGLYAVLW 324
           I+ G+  +L 
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 47.2 bits (113), Expect = 9e-07
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 20  YAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCS 79
           +A     SK  L+  + PL   AYR + A +  +    F+  K    ++   +  +    
Sbjct: 3   WALYFVFSKKLLER-ISPLTFTAYRFLIAGIL-LILLLFLLRKPFALLSLKAILALLYLG 60

Query: 80  VTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGT 139
           + G     +LYF  L+  + +    +T++ P  T +L+V+   E      K    ++ G 
Sbjct: 61  LFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGE------KLTLKQLLGI 114

Query: 140 IICVGGAMVLSF 151
           ++ + G +++  
Sbjct: 115 VLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 49/278 (17%), Positives = 101/278 (36%), Gaps = 41/278 (14%)

Query: 46  MFATLATIPFA---YFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIG 102
            FA    + FA        + RP +   +   +      G     VLYFV ++       
Sbjct: 19  YFAVFRRLIFALLLLLPLLRRRPPLKRLLRLLLLGALQIGVF--YVLYFVAVKRLPVGEA 76

Query: 103 CALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNS 162
             L  + P    +L+ +  +E      +P +  +   ++ + GA++L             
Sbjct: 77  ALLLYLAPLYVTLLSDLMGKE------RPRKLVLLAAVLGLAGAVLLL------------ 118

Query: 163 SIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPY-TCTTLM 221
                        + GN S    G +  + S IS+A   ++  +L KK        T  +
Sbjct: 119 -------------SDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWV 165

Query: 222 CLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYV 281
            L+ +++       +     A     +++  + LY G++ +ALA+ L    +    P   
Sbjct: 166 LLLGALLLLPFAWFLGPNPQA----LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA 221

Query: 282 SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGL 319
           S+ +    ++  ++   +  E L +   IG  LI+  +
Sbjct: 222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 186 GSIAIIASSISWA-AWVIIQTKLSKKFPAPYTCTTL---MCLISSIMCSVIGLIVERKRA 241
           G I  +A+S  +A   ++ Q  L KK         L   +  ++ I+     L  E    
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSE-GFK 59

Query: 242 AWKLNATIRLVSALYSGIVCSAL----AFCL---IVWSIQRKGPLYVSVFSPLLLVIVAI 294
             K              ++   L    AF         + R  PL  SV   +  V+V +
Sbjct: 60  LGKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIV 119

Query: 295 VSWALFQEKLFIGTAIGSVLIVTGLYA 321
           +S  +F + +     +G  + + G+  
Sbjct: 120 LSVIIFGDPVTFLNILGLAIAILGVVL 146

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	369
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.98
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.92
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.91
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.87
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.86
KOG2765	416	consensus Predicted membrane protein [Function unk	99.82
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.79
KOG1580	337	consensus UDP-galactose transporter related protei	99.73
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.69
KOG2766	336	consensus Predicted membrane protein [Function unk	99.68
KOG1581	327	consensus UDP-galactose transporter related protei	99.66
COG2510	140	Predicted membrane protein [Function unknown]	99.66
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.66
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.64
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.61
COG2510	140	Predicted membrane protein [Function unknown]	99.54
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.54
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.53
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.41
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.36
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.31
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.3
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.29
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.29
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.28
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.25
PRK13499	345	rhamnose-proton symporter; Provisional	99.24
KOG1582	367	consensus UDP-galactose transporter related protei	99.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.16
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.16
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.14
PRK11272	292	putative DMT superfamily transporter inner membran	99.11
PRK15430	296	putative chloramphenical resistance permease RarD;	99.11
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.08
PLN00411	358	nodulin MtN21 family protein; Provisional	99.08
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.05
PRK11689	295	aromatic amino acid exporter; Provisional	99.01
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.98
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.89
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.86
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.86
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.84
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.82
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.8
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.7
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.66
COG2962	293	RarD Predicted permeases [General function predict	98.65
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.62
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.58
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.57
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.54
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.41
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.41
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.39
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.13
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.09
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.98
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.9
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.85
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.84
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.83
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.74
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.71
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.66
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.6
PRK11431	105	multidrug efflux system protein; Provisional	97.52
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.52
COG2076	106	EmrE Membrane transporters of cations and cationic	97.51
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.43
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.43
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.4
COG2076	106	EmrE Membrane transporters of cations and cationic	97.38
PRK11431	105	multidrug efflux system protein; Provisional	97.31
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.29
KOG2765	416	consensus Predicted membrane protein [Function unk	97.25
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.24
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.18
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.13
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.03
KOG1581	327	consensus UDP-galactose transporter related protei	96.93
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.63
PRK13499	345	rhamnose-proton symporter; Provisional	96.51
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.36
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.32
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.28
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.03
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.73
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.62
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.74
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.21
KOG1580	337	consensus UDP-galactose transporter related protei	93.29
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	93.06
KOG4831	125	consensus Unnamed protein [Function unknown]	92.19
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	91.86
KOG1443	349	consensus Predicted integral membrane protein [Fun	91.68
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.66
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	89.48
PRK02237	109	hypothetical protein; Provisional	88.85
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	87.13
KOG1582	367	consensus UDP-galactose transporter related protei	86.48
KOG3912	372	consensus Predicted integral membrane protein [Gen	85.88
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	85.82
KOG2766	336	consensus Predicted membrane protein [Function unk	81.55
PRK02237	109	hypothetical protein; Provisional	80.97

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=6.7e-37  Score=284.83  Aligned_cols=318  Identities=29%  Similarity=0.568  Sum_probs=249.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHhh
Q 037942            4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK-TRPKITWPILFQIFLCSVTG   82 (369)
Q Consensus         4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~   82 (369)
                      .++.+.+..+++..+.++...++.|.+.+.|++|..+.++|+.+++++++++++.++++ ++++.+++++..+.+.|+++
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence            34678899999999999999999999999999999999999999999999998776542 33445688889999999998


Q ss_pred             hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHh------hhccccccccCCccceehhhhhhhhhhhhhhhcCcc
Q 037942           83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIF------RQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKT  156 (369)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~------~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~  156 (369)
                       ...+.+++.+++|++++.++++.++.|+++.++++++      +|||+++++      ++|++++++|+.++..++++.
T Consensus        89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~  161 (358)
T PLN00411         89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPR  161 (358)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCcc
Confidence             7788899999999999999999999999999999999      477777776      999999999999988654432


Q ss_pred             ccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHh
Q 037942          157 FGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIV  236 (369)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (369)
                      ....++..+....+.. ........+...|+++++.++++|++|++++|+..++++++...++++...+.+.+.+.....
T Consensus       162 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~  240 (358)
T PLN00411        162 VFVASSPPYLNFRQLS-PPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVV  240 (358)
T ss_pred             cccccccccccccccc-cccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHH
Confidence            1000000000000000 000011223356999999999999999999999988877766777788877777766666554


Q ss_pred             cc-cccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHH
Q 037942          237 ER-KRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLI  315 (369)
Q Consensus       237 ~~-~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li  315 (369)
                      ++ +...|..........+++.++. +.++|.+|++++++.+|++++++.+++|+++.+++++++||++++.+++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LI  319 (358)
T PLN00411        241 EKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILI  319 (358)
T ss_pred             ccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence            43 2233322222234557777765 568999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhheecCCCCC
Q 037942          316 VTGLYAVLWGKDKEL  330 (369)
Q Consensus       316 ~~gv~l~~~~~~~~~  330 (369)
                      +.|+++..+.++++.
T Consensus       320 l~Gv~l~~~~~~~~~  334 (358)
T PLN00411        320 TLGFYAVMWGKANEE  334 (358)
T ss_pred             HHHHHHHHhhhhhhh
Confidence            999999987665543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=1.3e-32  Score=252.02  Aligned_cols=288  Identities=16%  Similarity=0.173  Sum_probs=238.1

Q ss_pred             CccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q 037942            1 MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSV   80 (369)
Q Consensus         1 m~~~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~   80 (369)
                      |+..+-..-++..++..++||.++++.|...++ ++|..++++|+.+++++++++...+++  + ..+++++......|.
T Consensus         1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~--~-~~~~~~~~~~~~~g~   76 (292)
T PRK11272          1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGH--P-LPTLRQWLNAALIGL   76 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCC--C-CCcHHHHHHHHHHHH
Confidence            443333445677889999999999999998885 999999999999999999888655322  2 235678888888898


Q ss_pred             hhhHHHHHHHHHHh-cccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccC
Q 037942           81 TGATGNQVLYFVGL-ENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGI  159 (369)
Q Consensus        81 ~~~~~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~  159 (369)
                      ++...++.+++.+. ++++++.++++.++.|+++.+++.+ +|||+++++      ++|++++++|+.++...+  .   
T Consensus        77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~~--~---  144 (292)
T PRK11272         77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSGG--N---  144 (292)
T ss_pred             HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcCc--c---
Confidence            87678888999999 9999999999999999999999986 699999998      999999999999886321  1   


Q ss_pred             CCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccc
Q 037942          160 PNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERK  239 (369)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (369)
                                          .+....|++++++++++|+.+.+..|+..++  ++.....++...+.+.+.+.....+.+
T Consensus       145 --------------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (292)
T PRK11272        145 --------------------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGER  202 (292)
T ss_pred             --------------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCc
Confidence                                1233579999999999999999999997643  335566788888877777766544332


Q ss_pred             ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHH
Q 037942          240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGL  319 (369)
Q Consensus       240 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv  319 (369)
                      ..  ...+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       203 ~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv  280 (292)
T PRK11272        203 LT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAV  280 (292)
T ss_pred             cc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence            21  1123346889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheecCCC
Q 037942          320 YAVLWGKDK  328 (369)
Q Consensus       320 ~l~~~~~~~  328 (369)
                      ++..+.+++
T Consensus       281 ~~~~~~~~~  289 (292)
T PRK11272        281 VLVTLGKYL  289 (292)
T ss_pred             HHHHHHHhh
Confidence            998765543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=6e-32  Score=248.44  Aligned_cols=279  Identities=21%  Similarity=0.242  Sum_probs=218.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHH
Q 037942           10 FLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVL   89 (369)
Q Consensus        10 ~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   89 (369)
                      .++.++++++||.+++++|...++ ++|.++.++|+.++++.++++..   ++   +.++   ......|++.....+.+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~---~~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RP---KVPL---NLLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CC---CCch---HHHHHHHHHHHHHHHHH
Confidence            466889999999999999999886 99999999999998776655431   11   1122   23444455554556667


Q ss_pred             HHHHhcc-cchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhh
Q 037942           90 YFVGLEN-STPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKY  168 (369)
Q Consensus        90 ~~~al~~-~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  168 (369)
                      ++.++++ .+++.++++.++.|+++.+++++++|||+++++      +++++++++|+.++...+ .+            
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~~-~~------------  136 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIEDS-LN------------  136 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcccc-CC------------
Confidence            7889998 588999999999999999999999999999998      999999999999987321 11            


Q ss_pred             hhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCc--hHHHHHHHHHHHHHHHHHHHHhcccc---ccc
Q 037942          169 AEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAP--YTCTTLMCLISSIMCSVIGLIVERKR---AAW  243 (369)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~  243 (369)
                                ....+..|+++++.++++|++|.++.|+..++.+++  .....+....+.+.........+.+.   ..+
T Consensus       137 ----------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (299)
T PRK11453        137 ----------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL  206 (299)
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh
Confidence                      112235799999999999999999999987653332  23444555555444433333333211   112


Q ss_pred             ccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942          244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL  323 (369)
Q Consensus       244 ~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  323 (369)
                      ...+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++..
T Consensus       207 ~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        207 VTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV  286 (299)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence            22234478999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             ecCC
Q 037942          324 WGKD  327 (369)
Q Consensus       324 ~~~~  327 (369)
                      +.++
T Consensus       287 ~~~~  290 (299)
T PRK11453        287 FGLR  290 (299)
T ss_pred             cchh
Confidence            7664

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=3.4e-31  Score=242.68  Aligned_cols=283  Identities=15%  Similarity=0.169  Sum_probs=226.6

Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHh
Q 037942            2 RMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVT   81 (369)
Q Consensus         2 ~~~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   81 (369)
                      ++.++.+++.+++++.++|+.++++.|+..++ ++|..+.++|+++++++++++...  ++  ++.+++++...+..|.+
T Consensus         6 ~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~   80 (293)
T PRK10532          6 RKLPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVS   80 (293)
T ss_pred             cccccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999997 999999999999999988876432  12  13456788888888887


Q ss_pred             hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942           82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN  161 (369)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~  161 (369)
                      . ...+.+++++++++|++.++++..+.|+++.+++    +|++.+        ..++.++++|+.++...+ .+     
T Consensus        81 ~-~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--------~~~~~i~~~Gv~li~~~~-~~-----  141 (293)
T PRK10532         81 L-GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--------FVWVVLAVLGLWFLLPLG-QD-----  141 (293)
T ss_pred             H-HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--------HHHHHHHHHHHheeeecC-CC-----
Confidence            6 7888899999999999999999999999999886    344432        456778899998876321 11     


Q ss_pred             CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccc
Q 037942          162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA  241 (369)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (369)
                                       ....+..|++++++++++|++|.+..|+..++. ++... .+....+.+.+.+.....+.+  
T Consensus       142 -----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~--  200 (293)
T PRK10532        142 -----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGE--  200 (293)
T ss_pred             -----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCc--
Confidence                             112345799999999999999999999987663 44554 455566666666665543221  


Q ss_pred             ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942          242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA  321 (369)
Q Consensus       242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l  321 (369)
                       .. .+...|..++++|++++.++|.+|++++++.++++++++.+++|+++.+++++++||++++.+++|++++++|++.
T Consensus       201 -~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~  278 (293)
T PRK10532        201 -AL-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMG  278 (293)
T ss_pred             -cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence             11 1222466677999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             heecCCCCCC
Q 037942          322 VLWGKDKELK  331 (369)
Q Consensus       322 ~~~~~~~~~~  331 (369)
                      ..+.++|+.|
T Consensus       279 ~~~~~~~~~~  288 (293)
T PRK10532        279 STLTIRREPK  288 (293)
T ss_pred             HHhcCCCCCC
Confidence            9776655443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=2e-31  Score=244.55  Aligned_cols=282  Identities=14%  Similarity=0.114  Sum_probs=212.4

Q ss_pred             CccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC--CC-CCHHHHHHHHH
Q 037942            1 MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR--PK-ITWPILFQIFL   77 (369)
Q Consensus         1 m~~~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~   77 (369)
                      |+|+++.+|.+++++++++||..+++.|.. ++ ++|.++.++|+.++.++++++...+++++.  ++ .+++++.. ..
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence            788899999999999999999999999975 54 999999999999999888777654321110  00 12344333 33


Q ss_pred             HHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccc
Q 037942           78 CSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTF  157 (369)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~  157 (369)
                      .+.++.+.++.++++|++++|++.++++.++.|+++.+++++++|||+++++      ++|++++++|+.++...++   
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~---  148 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG---  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---
Confidence            5666668899999999999999999999999999999999999999999999      9999999999999873211   


Q ss_pred             cCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHh
Q 037942          158 GIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIV  236 (369)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~  236 (369)
                                             +.    ..++++++++|+.|.+..|+...+.. +......+....+.....+.   .
T Consensus       149 -----------------------~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  198 (296)
T PRK15430        149 -----------------------SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A  198 (296)
T ss_pred             -----------------------Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c
Confidence                                   11    14678899999999999999754311 11222333333333322111   1


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHH
Q 037942          237 ERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIV  316 (369)
Q Consensus       237 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~  316 (369)
                      ......+...+...+..+...++ .+.+++.+|++++++.+++.++++.+++|+++.+++++++||++++.+++|+++++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~  277 (296)
T PRK15430        199 DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIW  277 (296)
T ss_pred             cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            11111111111112333444454 67799999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhheec
Q 037942          317 TGLYAVLWG  325 (369)
Q Consensus       317 ~gv~l~~~~  325 (369)
                      +|+.+....
T Consensus       278 ~~~~v~~~~  286 (296)
T PRK15430        278 VALAIFVMD  286 (296)
T ss_pred             HHHHHHHHH
Confidence            888777544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=2.3e-31  Score=244.05  Aligned_cols=285  Identities=12%  Similarity=0.076  Sum_probs=215.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG   85 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (369)
                      +.+++++++++.++||.+++..|...++ ++|..+.++|+.++.+++.++..   +++.   + +.+++..+.+.++...
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~-~~~~~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---R-QFPKRYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---c-cccHHHHHHHhHHHHH
Confidence            4567889999999999999999999886 99999999999999999887631   1111   1 1122234445555577


Q ss_pred             HHHHHHHHhcc----cchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942           86 NQVLYFVGLEN----STPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN  161 (369)
Q Consensus        86 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~  161 (369)
                      ++.+++.++++    .+++.++++.++.|+++.+++++++|||+++++      ++|++++++|+.++..++ ...+.  
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~-~~~~~--  144 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGD-NGLSL--  144 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCC-ccchh--
Confidence            88888887754    577888999999999999999999999999998      999999999999988432 11000  


Q ss_pred             CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccc
Q 037942          162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA  241 (369)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (369)
                                  .+...+......|+++++++++||+.|.++.|+..++. ++.....   ..+.+.+.+.....+... 
T Consensus       145 ------------~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~~~~-  207 (295)
T PRK11689        145 ------------AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSPQPA-  207 (295)
T ss_pred             ------------hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhcCcc-
Confidence                        00000112335699999999999999999999987664 4444322   223333333233222111 


Q ss_pred             ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942          242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA  321 (369)
Q Consensus       242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l  321 (369)
                       ... +...|..+++.+ +++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus       208 -~~~-~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~  284 (295)
T PRK11689        208 -MVF-SLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL  284 (295)
T ss_pred             -ccC-CHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence             111 223577777777 47899999999999999999999999999999999999999999999999999999999988


Q ss_pred             heecCC
Q 037942          322 VLWGKD  327 (369)
Q Consensus       322 ~~~~~~  327 (369)
                      ..+.++
T Consensus       285 ~~~~~~  290 (295)
T PRK11689        285 CWLATR  290 (295)
T ss_pred             HhhhHh
Confidence            866544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.98  E-value=2.3e-30  Score=233.63  Aligned_cols=259  Identities=19%  Similarity=0.220  Sum_probs=220.6

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccch
Q 037942           20 YAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTP   99 (369)
Q Consensus        20 ~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~   99 (369)
                      ||.+++..|...+++.++....+.|++.+.+++.++...+       .+++++.+....|.++..+++.+++.|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999887668999999999999988887764332       245677788888888889999999999999999


Q ss_pred             hhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCC
Q 037942          100 TIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGN  179 (369)
Q Consensus       100 ~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (369)
                      ++++++.++.|+++.+++.+++|||+++++      ++|++++++|+.++... + .                       
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~~-~-~-----------------------  122 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLSD-G-N-----------------------  122 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhccC-C-c-----------------------
Confidence            999999999999999999999999999998      99999999999998632 1 1                       


Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHH
Q 037942          180 KSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSG  258 (369)
Q Consensus       180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  258 (369)
                      .+.+..|+.++++++++|+.+.+..|+..++.+ ++.....+.+..+.+.+.+.....++.. ..   +...|..+++.+
T Consensus       123 ~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~  198 (260)
T TIGR00950       123 LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLG  198 (260)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHH
Confidence            134578999999999999999999999987643 2345555778888888877776543322 11   333677788899


Q ss_pred             HHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHh
Q 037942          259 IVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLY  320 (369)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~  320 (369)
                      ++++.+++.++++++++.++++++.+.+++|+++.+++++++||+++..+++|.++++.|+.
T Consensus       199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999863

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=1.4e-28  Score=226.65  Aligned_cols=282  Identities=17%  Similarity=0.117  Sum_probs=218.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHH
Q 037942           13 MVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFV   92 (369)
Q Consensus        13 ~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   92 (369)
                      ..+..++-....+..|...++-..|..+++.|+.++.+.+.+.... ..+++++.+++++++.+..|++. +.++.+.+.
T Consensus         7 ~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~   84 (302)
T TIGR00817         7 FGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKRLKISSALLKLLLPVAIVH-TIGHVTSNV   84 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            3333444444556789888852559999999999988776655221 12333457789999999999997 888999999


Q ss_pred             HhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcc
Q 037942           93 GLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKM  172 (369)
Q Consensus        93 al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~  172 (369)
                      +++|++++.++++.++.|+++++++++++|||+++++      ++|++++++|+.+...  + +                
T Consensus        85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~-~----------------  139 (302)
T TIGR00817        85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--T-E----------------  139 (302)
T ss_pred             HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--C-c----------------
Confidence            9999999999999999999999999999999999998      9999999999987641  1 1                


Q ss_pred             cccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhh--hCCCchHHHHHHHHHHHHHHHHHHHHhccccc---cccc--
Q 037942          173 SEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSK--KFPAPYTCTTLMCLISSIMCSVIGLIVERKRA---AWKL--  245 (369)
Q Consensus       173 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~--  245 (369)
                             .+.+..|++++++++++|+++.+..|+..+  + .++...+.+++..+.+.++|.....+....   .+..  
T Consensus       140 -------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~  211 (302)
T TIGR00817       140 -------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI  211 (302)
T ss_pred             -------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence                   123467999999999999999999999877  4 366899999999999998888775543110   0100  


Q ss_pred             ---chhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942          246 ---NATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV  322 (369)
Q Consensus       246 ---~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  322 (369)
                         .....+...+..+..+....+.++++++++.++++.++..+++|+++++++++++||+++..+++|.++++.|++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence               00111221222233233333346668999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCC
Q 037942          323 LWGKDKE  329 (369)
Q Consensus       323 ~~~~~~~  329 (369)
                      .+.|.++
T Consensus       292 ~~~k~~~  298 (302)
T TIGR00817       292 SRVKAQK  298 (302)
T ss_pred             HHHhccC
Confidence            8765443

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=3.4e-27  Score=215.28  Aligned_cols=302  Identities=17%  Similarity=0.200  Sum_probs=239.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHhhh
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWK-TRPKITWPILFQIFLCSVTGA   83 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~   83 (369)
                      ..+..++.=..+++-..+...+....+.|.+ |....+.-++.-.++..++..+++++ ++.+..+++|+++++.+++- 
T Consensus        11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-   89 (334)
T PF06027_consen   11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-   89 (334)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-
Confidence            3455666667778888888888887776776 88888888888777777766664432 22233457788888899998 


Q ss_pred             HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942           84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS  163 (369)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  163 (369)
                      +.++++.+.|++|++.+.++++.++..+++++++++++|+|+++.+      ++|+++|++|+.++...+...       
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~-------  156 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLS-------  156 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccc-------
Confidence            8999999999999999999999999999999999999999999999      999999999999998654322       


Q ss_pred             cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccc-ccc
Q 037942          164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERK-RAA  242 (369)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~  242 (369)
                                ++.+.+..+...|+++++.++++||+++++.++..++. +......+..+.+.++..+.....|.+ ...
T Consensus       157 ----------~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~  225 (334)
T PF06027_consen  157 ----------GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIES  225 (334)
T ss_pred             ----------cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhc
Confidence                      11123456789999999999999999999999999884 567788888888888887777666652 222


Q ss_pred             cccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942          243 WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV  322 (369)
Q Consensus       243 ~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  322 (369)
                      ..+.+. .+. +.....++...-|.+....++..+|+..++-..+..+.+++++++++|+++++..++|.++|++|.+++
T Consensus       226 ~~w~~~-~~~-~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy  303 (334)
T PF06027_consen  226 IHWTSQ-VIG-LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVY  303 (334)
T ss_pred             cCCChh-hHH-HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence            222222 222 323233455667778888999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCCCCCC
Q 037942          323 LWGKDKELKPDN  334 (369)
Q Consensus       323 ~~~~~~~~~~~~  334 (369)
                      +..+++.+++++
T Consensus       304 ~~~~~~~~~~~~  315 (334)
T PF06027_consen  304 NLAESPEEEARR  315 (334)
T ss_pred             EccCCcccccch
Confidence            887766544443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=2.9e-27  Score=215.54  Aligned_cols=274  Identities=14%  Similarity=0.164  Sum_probs=203.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhh-hcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942           10 FLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIE-WKTRPKITWPILFQIFLCSVTGATGNQV   88 (369)
Q Consensus        10 ~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (369)
                      +++.++++++|+..++..|...++ -++.  .+++...+.+++.++...+. ++.++..+ +++......+.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLP-ATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcc-hhhHHHHHHHHHHHHHHHH
Confidence            567899999999999999966554 4443  47777777777777766532 22233233 3444444445555589999


Q ss_pred             HHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhh
Q 037942           89 LYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKY  168 (369)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  168 (369)
                      +++.|+++.+++.++++.++.|+++.+++++++|||+++++      ++|+.+++.|+.++...+  .            
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~--~------------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSR--F------------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhccc--c------------
Confidence            99999999999999999999999999999999999999999      999999999999887321  1            


Q ss_pred             hhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchH---HHHHHHHHHHHHHHHHHHHhccccccccc
Q 037942          169 AEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYT---CTTLMCLISSIMCSVIGLIVERKRAAWKL  245 (369)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (369)
                                 ...+..|+.++++++++|++|.+..|+..++.++...   ...+......+...+.....+..  .+..
T Consensus       139 -----------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  205 (281)
T TIGR03340       139 -----------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMFP  205 (281)
T ss_pred             -----------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chhh
Confidence                       1123468889999999999999998886544222111   22222222211111111111111  1111


Q ss_pred             chhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942          246 NATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA  321 (369)
Q Consensus       246 ~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l  321 (369)
                       ....++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus       206 -~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       206 -YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence             222456777888888999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=4.4e-26  Score=213.21  Aligned_cols=284  Identities=15%  Similarity=0.148  Sum_probs=221.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHHhh
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKI--TWPILFQIFLCSVTG   82 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   82 (369)
                      +.+...+.+..-.+-....+..|..++. ++ |..++++|++++.+++.++.... .+++++.  .+++++..+..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence            3455556666666666677888999886 99 99999999999988765553322 2222333  345788899999999


Q ss_pred             hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCC
Q 037942           83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNS  162 (369)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~  162 (369)
                      . ..+...+.|+++++++.++++..+.|+++++++++++|||+++++      ++++++++.|+.+.+..   +      
T Consensus       125 ~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~~---~------  188 (350)
T PTZ00343        125 L-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASVK---E------  188 (350)
T ss_pred             H-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheecc---c------
Confidence            4 446667899999999999999999999999999999999999998      99999999999998731   1      


Q ss_pred             CcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC------CchHHHHHHHHHHHHHHHHHHHHh
Q 037942          163 SIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP------APYTCTTLMCLISSIMCSVIGLIV  236 (369)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~  236 (369)
                                       .+.+..|++++++|+++++++.++.|+..++.+      ++.....+..+.+.++++|+....
T Consensus       189 -----------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~  251 (350)
T PTZ00343        189 -----------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF  251 (350)
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence                             133467999999999999999999999876532      344456666888888888887755


Q ss_pred             ccc--ccccc----cchhhHHHHHHHHHHHHhHHHHHHHHH----HHhccCcceeeehhhHHHHHHHHHHHHHhcCccch
Q 037942          237 ERK--RAAWK----LNATIRLVSALYSGIVCSALAFCLIVW----SIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFI  306 (369)
Q Consensus       237 ~~~--~~~~~----~~~~~~~~~l~~~gi~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~  306 (369)
                      +..  ...+.    ......+..+++ .++.+++.+++++.    +++++++.+.++..+++|+++++++++++||++++
T Consensus       252 e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~  330 (350)
T PTZ00343        252 EGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTL  330 (350)
T ss_pred             hhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCch
Confidence            431  11110    000111223333 34567888888885    99999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHhhheec
Q 037942          307 GTAIGSVLIVTGLYAVLWG  325 (369)
Q Consensus       307 ~~~~G~~li~~gv~l~~~~  325 (369)
                      .+++|.++++.|++++++.
T Consensus       331 ~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        331 LGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HhHHHHHHHHHHHHHHhhc
Confidence            9999999999999998764

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=1.9e-25  Score=201.04  Aligned_cols=248  Identities=14%  Similarity=0.103  Sum_probs=183.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCCHHH-HHHHHHHHHh
Q 037942            8 MPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK-----TRPKITWPI-LFQIFLCSVT   81 (369)
Q Consensus         8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~   81 (369)
                      +|++++++++++||.++++.|. .++ ++|.+++++|++++.+++.++...++++     +.++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 454 9999999999999998887765443221     111122333 3345666666


Q ss_pred             hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942           82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN  161 (369)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~  161 (369)
                      . ..++.+++.|++++++++++++.++.|+++++++++++|||+++++      +++++++++|+.++..+++       
T Consensus        80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence            5 8999999999999999999999999999999999999999999998      9999999999998863211       


Q ss_pred             CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccc
Q 037942          162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA  241 (369)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (369)
                                         +..    .+++.++++|+.|.+..|+..++ +. ....... ........+.... .....
T Consensus       146 -------------------~~~----~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~-~~~~~  198 (256)
T TIGR00688       146 -------------------SLP----WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLET-LSLMPVAIYYLLQ-TDFAT  198 (256)
T ss_pred             -------------------Cch----HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHHH-HHHHHHHHHHHHH-hccCc
Confidence                               111    35788999999999999997643 22 2222111 1111111111111 11110


Q ss_pred             ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHH
Q 037942          242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL  299 (369)
Q Consensus       242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~  299 (369)
                      ....++...|..+++.|++ +.++|.++++++++.++++++++.+++|+++.+++.++
T Consensus       199 ~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       199 VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            0111122267777787875 78999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=3.6e-23  Score=189.36  Aligned_cols=284  Identities=21%  Similarity=0.304  Sum_probs=219.0

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhh
Q 037942            4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGA   83 (369)
Q Consensus         4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   83 (369)
                      ++...+..+.++..+.|+......|...++..++....+.|...+.+...+.....+ .... ...+.+....+.+.+..
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~   80 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP-RGLR-PALRPWLLLLLLALLGL   80 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc-cccc-ccccchHHHHHHHHHHH
Confidence            345678888999999999999999988774366677777799998888443322211 1111 12222556666777777


Q ss_pred             HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHH-HhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCC
Q 037942           84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAV-IFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNS  162 (369)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~-l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~  162 (369)
                      ...+.+++.++++++++.++++.++.|+++.+++. +++|||+++++      +.++++++.|+.++...+...      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~------  148 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGG------  148 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcc------
Confidence            99999999999999999999999999999999997 77799999998      999999999999998532211      


Q ss_pred             CcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHH-HHHHHHHHHHHHHHHHhccccc
Q 037942          163 SIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTT-LMCLISSIMCSVIGLIVERKRA  241 (369)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~  241 (369)
                                      ... ...|+.+++.++++++++.+..|+.. + .++..... +..........+... .+.+  
T Consensus       149 ----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--  206 (292)
T COG0697         149 ----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL-SGFG--  206 (292)
T ss_pred             ----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh-cccc--
Confidence                            001 57999999999999999999999987 3 24344444 333311122112111 1111  


Q ss_pred             ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942          242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA  321 (369)
Q Consensus       242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l  321 (369)
                        .......+..+.+.|++++.+++.++.+++++.++...+++.+++|+++.++++++++|+++..+++|+++++.|+.+
T Consensus       207 --~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l  284 (292)
T COG0697         207 --APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLL  284 (292)
T ss_pred             --ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence              112233688888889998889999999999999999999999999999999999999999999999999999999998


Q ss_pred             heec
Q 037942          322 VLWG  325 (369)
Q Consensus       322 ~~~~  325 (369)
                      ...+
T Consensus       285 ~~~~  288 (292)
T COG0697         285 ASLR  288 (292)
T ss_pred             Hhcc
Confidence            8766

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.92  E-value=6.2e-23  Score=178.33  Aligned_cols=282  Identities=13%  Similarity=0.113  Sum_probs=225.0

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC-C--CCCHHHHHHHHHHHH
Q 037942            4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR-P--KITWPILFQIFLCSV   80 (369)
Q Consensus         4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~   80 (369)
                      ++..+|+++.+.+.++||..+.+.|.. +. .++.++...|.+-+.++++.+....++.+. .  ..+++.+....+.+.
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~   80 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL   80 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence            567899999999999999999999974 54 999999999999998888777665432211 1  124566666677777


Q ss_pred             hhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCC
Q 037942           81 TGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIP  160 (369)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~  160 (369)
                      +. ..++..|.+|.++..+-++++-++.+|++.++++.+++|||+++.|      ++++.++.+||....+..|.     
T Consensus        81 li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~-----  148 (293)
T COG2962          81 LI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS-----  148 (293)
T ss_pred             HH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC-----
Confidence            66 9999999999999999999999999999999999999999999999      99999999999999865432     


Q ss_pred             CCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccc
Q 037942          161 NSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR  240 (369)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (369)
                                           -++    .++.=+++|+.|...-|+..-   |+.+-.....+.-....+.+.+..+...
T Consensus       149 ---------------------lpw----val~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~l~~~~  200 (293)
T COG2962         149 ---------------------LPW----VALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLFLADSG  200 (293)
T ss_pred             ---------------------CcH----HHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHHHhcCc
Confidence                                 222    345567889999998777632   3456556666665555555555443322


Q ss_pred             cccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHh
Q 037942          241 AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLY  320 (369)
Q Consensus       241 ~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~  320 (369)
                      +.....+...+..+...|. .+.++..++..+.++.+-+..+.++|++|..-.+++++++||+++..+++..++|.+|..
T Consensus       201 ~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~  279 (293)
T COG2962         201 QFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA  279 (293)
T ss_pred             hhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            1122133446677777777 478999999999999999999999999999999999999999999999999999999999


Q ss_pred             hheecCCC
Q 037942          321 AVLWGKDK  328 (369)
Q Consensus       321 l~~~~~~~  328 (369)
                      ++.+...+
T Consensus       280 l~~~d~l~  287 (293)
T COG2962         280 LFSIDGLY  287 (293)
T ss_pred             HHHHHHHH
Confidence            99776544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.91  E-value=3.7e-22  Score=168.88  Aligned_cols=274  Identities=15%  Similarity=0.185  Sum_probs=227.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942            9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV   88 (369)
Q Consensus         9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (369)
                      +++.++.+++..=....+.|...+. +.+.-.+.+|..++.++++++.+-.  +  .+.++++|......|+.. ...|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw--r--~r~~~~~~~~~~~yGvsL-g~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW--R--RRLSKPQRLALLAYGVSL-GGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH--H--hccChhhhHHHHHHHHHH-HHHHH
Confidence            4788888888888888899999997 9999999999999999998874432  2  346788999999999988 89999


Q ss_pred             HHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhh
Q 037942           89 LYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKY  168 (369)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  168 (369)
                      +||.+++.+|.+.+..+-++.|+.+.+++.    +|  .++      .+-+.+++.|+.++.-. +..            
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p~-~~~------------  141 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLPL-GQS------------  141 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhheec-cCC------------
Confidence            999999999999999999999999888762    11  122      66777888999888732 221            


Q ss_pred             hhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchh
Q 037942          169 AEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNAT  248 (369)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  248 (369)
                                ....+..|..+++.++.||+.|.+..||..+. .+...-+...+.++.++.+|+......+    ...++
T Consensus       142 ----------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p  206 (292)
T COG5006         142 ----------VWSLDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP----ALFSP  206 (292)
T ss_pred             ----------cCcCCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch----hhcCh
Confidence                      24677899999999999999999999998764 3457788888999999999998843321    11122


Q ss_pred             hHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942          249 IRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK  328 (369)
Q Consensus       249 ~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  328 (369)
                      ......+.++++++.+.|.+-..++++.+....+.+..+||.++.+.+++++||.+|+.||.|+..++.+..-..+..+|
T Consensus       207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            25566777899999999999999999999999999999999999999999999999999999999999998766655444

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=4.7e-21  Score=174.83  Aligned_cols=279  Identities=14%  Similarity=0.116  Sum_probs=204.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942            9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV   88 (369)
Q Consensus         9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (369)
                      ++++.++++++||...++.|...  |.++.++.  |..++.+++..+....+ +.+ ...++.+...++.|++- ..++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~-~~~-~~~~~~~~~g~l~G~~w-~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFV-LPE-FWALSIFLVGLLSGAFW-ALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHh-CCc-ccccHHHHHHHHHHHHH-Hhhhh
Confidence            57899999999999999999854  58887775  77778777766555532 211 11244445455555554 88999


Q ss_pred             HHHHHhcccchhhHHhhhh-hhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchh
Q 037942           89 LYFVGLENSTPTIGCALTN-ILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWK  167 (369)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  167 (369)
                      +++.+.++++.+.+..+.+ +.+++..+++.+++||+.++++  ...-.+|++++++|++++...++++.          
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~----------  142 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSA----------  142 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecccccc----------
Confidence            9999999999999999977 8889999999999999987762  00017889999999888764321110          


Q ss_pred             hhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHH---HHHHHHHHHHHHhcccccccc
Q 037942          168 YAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCL---ISSIMCSVIGLIVERKRAAWK  244 (369)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~  244 (369)
                              +++...+..+|+.++++++++|+.|.+..|+..   .+|....+.+..   .+.++..+..  . .. .++ 
T Consensus       143 --------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~~~-  206 (290)
T TIGR00776       143 --------GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGMVIGGIIFNLGH--I-LA-KPL-  206 (290)
T ss_pred             --------ccccccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHHHHHHHHHHHHH--h-cc-cch-
Confidence                    000002346799999999999999999999863   255666444443   3333322221  1 11 112 


Q ss_pred             cchhhHHHHHHHHHHHHhHHHHHHHHHHHh-ccCcceeeehhhHHHHHHHHHHHHHhcCccchhhh----HHHHHHHHHH
Q 037942          245 LNATIRLVSALYSGIVCSALAFCLIVWSIQ-RKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTA----IGSVLIVTGL  319 (369)
Q Consensus       245 ~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~gv  319 (369)
                       .+...+..++ .|++ ..+++.+|..+.+ +.+++..+++.+.+|+++.++++++++|..++.++    +|+++++.|+
T Consensus       207 -~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~  283 (290)
T TIGR00776       207 -KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAA  283 (290)
T ss_pred             -HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHH
Confidence             1222344444 7887 6899999999999 99999999999999999999999999999999999    9999999999


Q ss_pred             hhheec
Q 037942          320 YAVLWG  325 (369)
Q Consensus       320 ~l~~~~  325 (369)
                      .+....
T Consensus       284 ~l~~~~  289 (290)
T TIGR00776       284 NILGIG  289 (290)
T ss_pred             HHHhcc
Confidence            887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.87  E-value=1.4e-23  Score=178.49  Aligned_cols=293  Identities=16%  Similarity=0.134  Sum_probs=217.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG   85 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (369)
                      ..+|.++..++ .++..+.++++...+  .+|....-.|++.-.+...+...+++....  -+.....++++.|+.+ ..
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~t  109 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-FT  109 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-hh
Confidence            34667777777 555556666655555  789999999987777777766555332221  1223344567788888 67


Q ss_pred             HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcc
Q 037942           86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIH  165 (369)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~  165 (369)
                      +..+.|+|++|.+.+.++++....|.++.++++.++|||.++..      .++..+.+.|+++++-   +..-+      
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvR---PpFlF------  174 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVR---PPFLF------  174 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEec---CCccc------
Confidence            77888999999999999999999999999999999999999998      9999999999999982   22111      


Q ss_pred             hhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 037942          166 WKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKL  245 (369)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (369)
                         .+++.++.+.....+.+|...++.+.+.-+.-.++.|+..++. +......+..+++.+..+...... +. -+++.
T Consensus       175 ---G~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~i-g~-~~lP~  248 (346)
T KOG4510|consen  175 ---GDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASI-GA-VQLPH  248 (346)
T ss_pred             ---CCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhc-cc-eecCc
Confidence               1111122222345677888999999999999999999997774 334444455555555443332211 11 12332


Q ss_pred             chhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheec
Q 037942          246 NATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWG  325 (369)
Q Consensus       246 ~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~  325 (369)
                      - ..+|+.++.+|++ +.+++.+...++++..+..++++.+.+.+++.+++++++++.|+++.|+|+++++.+.+.....
T Consensus       249 c-gkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~  326 (346)
T KOG4510|consen  249 C-GKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK  326 (346)
T ss_pred             c-ccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence            2 2367777778886 4689999999999999999999999999999999999999999999999999999998877554


Q ss_pred             CC
Q 037942          326 KD  327 (369)
Q Consensus       326 ~~  327 (369)
                      |.
T Consensus       327 kw  328 (346)
T KOG4510|consen  327 KW  328 (346)
T ss_pred             HH
Confidence            43

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.86  E-value=2.4e-19  Score=165.00  Aligned_cols=267  Identities=18%  Similarity=0.185  Sum_probs=212.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHH
Q 037942           36 KPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFV  115 (369)
Q Consensus        36 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l  115 (369)
                      .|..+++.++....++..+.....+   .++.++..+..+...+++. .++..+.+.|++|+|.+.-.++.++.|+.+++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            3889999999999888777655533   1223445566677778877 88889999999999999999999999999999


Q ss_pred             HHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHH
Q 037942          116 LAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSI  195 (369)
Q Consensus       116 l~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  195 (369)
                      ++.+++|+|.++++      ++++++..+|+.+....+....                +.++........|+++.+++.+
T Consensus       107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~----------------~~~~~~~~~~~~G~~ll~~sl~  164 (303)
T PF08449_consen  107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSS----------------SSSNSSSFSSALGIILLLLSLL  164 (303)
T ss_pred             HHHHhcCccccHHH------HHHHHHHHhhHheeeecccccc----------------cccccccccchhHHHHHHHHHH
Confidence            99999999999998      9999999999999986543221                1111122223349999999999


Q ss_pred             HHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHH--hccccc--ccccchhhHHHHHHHHHHHHhHHHHHHHH
Q 037942          196 SWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLI--VERKRA--AWKLNATIRLVSALYSGIVCSALAFCLIV  270 (369)
Q Consensus       196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~~~gi~~~~~~~~~~~  270 (369)
                      +.+...+.+++..++++ ++...+++.+..+.+...+....  .+....  ......+..+..++...+ +..++..+.+
T Consensus       165 ~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~  243 (303)
T PF08449_consen  165 LDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIF  243 (303)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHH
Confidence            99999999999987655 66889999999999888777776  322111  122222324444444444 5667888888


Q ss_pred             HHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942          271 WSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       271 ~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  329 (369)
                      ...++.++...+++..++-+++++++++++++++++.+|+|.++++.|+.+....++|+
T Consensus       244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            89999999999999999999999999999999999999999999999999998877664

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=8.9e-19  Score=156.46  Aligned_cols=300  Identities=12%  Similarity=0.141  Sum_probs=228.2

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHHHHHHHH----HHh---hhc-------------
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGM--KPLVLVAYRQMFATLATIPFA----YFI---EWK-------------   62 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~--~~~~~~~~r~~~~~l~l~~~~----~~~---~~~-------------   62 (369)
                      +...|+.++++..++|=.+.-+.+...+++-  .|+.+++.....-.+-+.++.    .++   .|.             
T Consensus        11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~   90 (416)
T KOG2765|consen   11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA   90 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence            4678999999999999999999999988633  488888777655555555433    111   110             


Q ss_pred             -------------------------------C-------------CC--CCCH-------------HHHHHHHHHHHhhh
Q 037942           63 -------------------------------T-------------RP--KITW-------------PILFQIFLCSVTGA   83 (369)
Q Consensus        63 -------------------------------~-------------~~--~~~~-------------~~~~~~~~~g~~~~   83 (369)
                                                     .             ..  +.+.             +..+..+....+- 
T Consensus        91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW-  169 (416)
T KOG2765|consen   91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW-  169 (416)
T ss_pred             hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-
Confidence                                           0             00  0011             2223334444444 


Q ss_pred             HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942           84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS  163 (369)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  163 (369)
                      .+++..++.|+.+++++..+++..+.-+|+..++.++..||+++..      ++++++++.|++++..++..        
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~--------  235 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSK--------  235 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEecccc--------
Confidence            7888999999999999999999999999999999999999999996      99999999999999864321        


Q ss_pred             cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC---CchHHHHHHHHHHHHHHHHHHHHhcc-c
Q 037942          164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP---APYTCTTLMCLISSIMCSVIGLIVER-K  239 (369)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-~  239 (369)
                                ..++..+.+...|+++++++++.||+|.++.|+...+.+   |--....+..++..+++.|..++.+. .
T Consensus       236 ----------~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~  305 (416)
T KOG2765|consen  236 ----------QNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG  305 (416)
T ss_pred             ----------ccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence                      122334567799999999999999999999999876643   32223334444555555554443332 3


Q ss_pred             ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHH
Q 037942          240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGL  319 (369)
Q Consensus       240 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv  319 (369)
                      .+.++.+.......++..+.++++++-++|.+|.-..++..++.-+.++...+++.+.++-+..+++.+++|.+.|++|.
T Consensus       306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F  385 (416)
T KOG2765|consen  306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF  385 (416)
T ss_pred             cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            33455555556677777888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheecCCCC
Q 037942          320 YAVLWGKDKE  329 (369)
Q Consensus       320 ~l~~~~~~~~  329 (369)
                      +..++.....
T Consensus       386 v~vn~~~~~~  395 (416)
T KOG2765|consen  386 VIVNISSENS  395 (416)
T ss_pred             hheecccccc
Confidence            9998776544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.79  E-value=9.3e-19  Score=157.97  Aligned_cols=274  Identities=19%  Similarity=0.168  Sum_probs=219.2

Q ss_pred             HHHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchh
Q 037942           23 MNFTSKLALDS-GMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPT  100 (369)
Q Consensus        23 ~~~~~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~  100 (369)
                      ..+..|+.++. |.+ |..++..+...+.+........+..+..+..++..+...+.+|++. +++.++-+.|+.+.+++
T Consensus        32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~Vs  110 (316)
T KOG1441|consen   32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVS  110 (316)
T ss_pred             eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchh
Confidence            34455777772 354 8899999888888887776555444333333556788888899988 99999999999999999


Q ss_pred             hHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCC
Q 037942          101 IGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNK  180 (369)
Q Consensus       101 ~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (369)
                      .++.+..++|++++++++++.+|+.++..      +..++....|+.+.+..+                          .
T Consensus       111 F~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e--------------------------~  158 (316)
T KOG1441|consen  111 FYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTE--------------------------L  158 (316)
T ss_pred             HHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeecc--------------------------c
Confidence            99999999999999999999999999998      999999999999998522                          3


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhh--hCC-CchHHHHHHHHHHHHHHH-HHHHHhccccc---ccccchhhHHHH
Q 037942          181 SNLILGSIAIIASSISWAAWVIIQTKLSK--KFP-APYTCTTLMCLISSIMCS-VIGLIVERKRA---AWKLNATIRLVS  253 (369)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~~  253 (369)
                      ..+..|.+.++.+.+..+..+++.++..+  +.+ |+.....++..++.+.++ |.....+++..   .... +......
T Consensus       159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~-~~~~~~~  237 (316)
T KOG1441|consen  159 SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAP-WFVTFLI  237 (316)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccc-cchhhHH
Confidence            56789999999999999999999999984  222 779999999999999998 77776555332   1111 1112233


Q ss_pred             HHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCCCC
Q 037942          254 ALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELK  331 (369)
Q Consensus       254 l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~  331 (369)
                      +.+.. ++...-+...+..+.+++|.+.++...+.-++.++.++++|+++.++.+..|+++.++|+.++.+.|.++++
T Consensus       238 ~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  238 LLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            33333 334455566677899999999999999999999999999999988999999999999999999988876544

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.73  E-value=2.9e-16  Score=131.68  Aligned_cols=260  Identities=16%  Similarity=0.115  Sum_probs=203.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHH
Q 037942           37 PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVL  116 (369)
Q Consensus        37 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll  116 (369)
                      ...++|+++..-.++.-++..+++..   +.+...-..+..++.- +.++....+.|+++.|-....+-.++.|+-++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            45667777777777665554443321   2222223334444443 4677788899999999999999999999999999


Q ss_pred             HHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHH
Q 037942          117 AVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSIS  196 (369)
Q Consensus       117 ~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  196 (369)
                      ++++.|++.+|++      ...++++++|+.+..+.++..                   .+..+.....|.++.+++...
T Consensus       129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv-------------------~g~e~~t~g~GElLL~lSL~m  183 (337)
T KOG1580|consen  129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKV-------------------GGAEDKTFGFGELLLILSLAM  183 (337)
T ss_pred             ehhhhcccccHHH------HHHHHHHHHHHHHhhcccccc-------------------CCCcccccchHHHHHHHHHHh
Confidence            9999999999997      999999999999998643322                   233567788999999999999


Q ss_pred             HHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhccc--ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 037942          197 WAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERK--RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSI  273 (369)
Q Consensus       197 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~  273 (369)
                      -+.....+.+....+. ....+++++++.+.+.+..-.++.+.-  +..+....+..|+.+..+++ ++.+++++.+..+
T Consensus       184 DGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv  262 (337)
T KOG1580|consen  184 DGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTV  262 (337)
T ss_pred             cccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHH
Confidence            9999999988876543 447799999999988887766655442  22233334557888888887 6789999999999


Q ss_pred             hccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942          274 QRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       274 ~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  326 (369)
                      .+.+|-..+++....-+++++.++++++.+++.+||+|.++++.|...=....
T Consensus       263 ~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  263 EEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             HHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            99999999999999999999999999999999999999999999977654433

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.69  E-value=8.1e-14  Score=125.16  Aligned_cols=299  Identities=10%  Similarity=0.113  Sum_probs=219.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhhc----CCCC------CCHHHHHH
Q 037942            8 MPFLAMVTVQLGYAGMNFTSKLALDSG---MKPLVLVAYRQMFATLATIPFAYFIEWK----TRPK------ITWPILFQ   74 (369)
Q Consensus         8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~------~~~~~~~~   74 (369)
                      .-++.++...+.++......|+....+   +.|...++.--++-.+++...++...++    ..+.      ..+++...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            567778888899999999999987654   6688888888888877777766665322    1111      24456667


Q ss_pred             HHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcC
Q 037942           75 IFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHG  154 (369)
Q Consensus        75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~  154 (369)
                      ..+.+++. ++.|.+++.++.+.+++..++..++..+.|+++.++++++|++++|      |.++++.++|+.++..+..
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence            77777776 8888899999999999999999999999999999999999999999      9999999999999974332


Q ss_pred             ccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHH-HHHHHHHHHHH
Q 037942          155 KTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMC-LISSIMCSVIG  233 (369)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~  233 (369)
                      ++-               ++.++....+...|....+.++..-+...++.++..++...+....-.+. +.+.++.+...
T Consensus       168 ~~~---------------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~  232 (345)
T KOG2234|consen  168 SPT---------------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTI  232 (345)
T ss_pred             CCC---------------CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence            221               01113446788999999999999999999999999987443343333333 33333333333


Q ss_pred             HHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHH
Q 037942          234 LIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSV  313 (369)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~  313 (369)
                      +..+.....|.... ..|-...++-++.++++-.+...-+|+.+-..=.....+..+++.+.++.+++-.||....+|..
T Consensus       233 ~~~d~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~  311 (345)
T KOG2234|consen  233 LLQDGEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGAL  311 (345)
T ss_pred             hhccccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence            32222111111100 01222333334456666677777888888888888888999999999999999999999999999


Q ss_pred             HHHHHHhhheecCCCC
Q 037942          314 LIVTGLYAVLWGKDKE  329 (369)
Q Consensus       314 li~~gv~l~~~~~~~~  329 (369)
                      +++.++.++...+.++
T Consensus       312 lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  312 LVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHhhcCCccc
Confidence            9999999998544443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.68  E-value=2.6e-16  Score=133.60  Aligned_cols=281  Identities=15%  Similarity=0.116  Sum_probs=209.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG   85 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (369)
                      .+++.+.=+-.++-......+......|++ |...+|..++.-+++..++..+|+  +   .-...|+.+++.++.. +-
T Consensus        17 li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~---~~~~~~~hYilla~~D-VE   90 (336)
T KOG2766|consen   17 LIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--K---YIKAKWRHYILLAFVD-VE   90 (336)
T ss_pred             hheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--H---HHHHHHHHhhheeEEe-ec
Confidence            445544444444444445555554444565 888899999999999999888743  1   2245566688889888 77


Q ss_pred             HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcc
Q 037942           86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIH  165 (369)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~  165 (369)
                      +|++...|.||++...++++-+...+.+.+++|+++|.|.++.+      ..|+++|+.|++++.+.+  ..        
T Consensus        91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sD--V~--------  154 (336)
T KOG2766|consen   91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSD--VH--------  154 (336)
T ss_pred             ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEee--ec--------
Confidence            77788999999999999999999999999999999999999987      999999999999998642  11        


Q ss_pred             hhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 037942          166 WKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKL  245 (369)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (369)
                              .....++.+..+|+.+.++++-+||+.++..+.+.++ .|....+....+.++++...-.+.......... 
T Consensus       155 --------agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~-  224 (336)
T KOG2766|consen  155 --------AGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQFIFERHHVSTLH-  224 (336)
T ss_pred             --------cccccCCCCCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhhhccceeeEe-
Confidence                    1122246788999999999999999999999999988 466888888889998888776443222211111 


Q ss_pred             chhhHHHHHHHH-HHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942          246 NATIRLVSALYS-GIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       246 ~~~~~~~~l~~~-gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                       ++  |....++ ..++..+-|-+....++..+++-.++-..++-.++.++  ..||-+.+|..++..+.+..|.+++..
T Consensus       225 -w~--~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  225 -WD--SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             -eh--HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence             11  2222222 33333444444455678888888888888888999888  678888999999999999999888833

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.66  E-value=5.5e-15  Score=129.04  Aligned_cols=265  Identities=15%  Similarity=0.170  Sum_probs=214.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHH
Q 037942           36 KPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFV  115 (369)
Q Consensus        36 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l  115 (369)
                      ++..+++.+-+.+.++-..+...  ++.. ....+.|..+...++.+ .++..+-+.|++|++-..-.+-.++--+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhc--cccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            57888888888888877555433  2222 34456677788888888 88889999999999999999999999999999


Q ss_pred             HHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHH
Q 037942          116 LAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSI  195 (369)
Q Consensus       116 l~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  195 (369)
                      .+.+++|.|.+..+      .+...++..|+.+....+..+                 +.++....+...|+.+......
T Consensus       126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~-----------------s~~~~g~~ns~~G~~Ll~~~L~  182 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD-----------------SSSKSGRENSPIGILLLFGYLL  182 (327)
T ss_pred             HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC-----------------CccccCCCCchHhHHHHHHHHH
Confidence            99999999999998      999999999999988653322                 2223345688999999999999


Q ss_pred             HHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcccc--cccccchhhHHHHHHHHHHHHhHHHHHHHHHH
Q 037942          196 SWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKR--AAWKLNATIRLVSALYSGIVCSALAFCLIVWS  272 (369)
Q Consensus       196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a  272 (369)
                      ..++-+..++++.+++. +++.++++.++...+......+..+..+  ..+-..++..+.-++.... +..+++.+.++.
T Consensus       183 fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~T  261 (327)
T KOG1581|consen  183 FDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYT  261 (327)
T ss_pred             HHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhh
Confidence            99999999999987654 6788999999999998877755333321  2222333445666666665 567899999999


Q ss_pred             HhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942          273 IQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK  328 (369)
Q Consensus       273 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  328 (369)
                      +++.++.+.+.++.++-.++++++.++++.+.++.||+|..+++.|+.+-...+++
T Consensus       262 I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  262 IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999988766655

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.66  E-value=5.3e-16  Score=117.98  Aligned_cols=134  Identities=16%  Similarity=0.214  Sum_probs=121.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CCCHHHHHHHHHHHHhhhHHHH
Q 037942            9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-KITWPILFQIFLCSVTGATGNQ   87 (369)
Q Consensus         9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~   87 (369)
                      ..+++++++++||...++.|...++ +||...++.|..+..+++..++....+.+.+ ..+.|.|..+++.|+.+ .+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence            5789999999999999999999995 9999999999999999999888875543322 24788899999999777 9999


Q ss_pred             HHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           88 VLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        88 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      .+||.|++...++.+.++-.+.|+++++++++++|||++.++      |+|+++..+|++++.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999      999999999998875

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.66  E-value=3.8e-14  Score=123.76  Aligned_cols=254  Identities=14%  Similarity=0.139  Sum_probs=192.5

Q ss_pred             CC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCC---CCCHHHHHHH-HHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhh
Q 037942           35 MK-PLVLVAYRQMFATLATIPFAYFIEWKTRP---KITWPILFQI-FLCSVTGATGNQVLYFVGLENSTPTIGCALTNIL  109 (369)
Q Consensus        35 ~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~~-~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~  109 (369)
                      ++ |..++.++.++-.++........+++..+   ..+|++..+- ...+++. ++.-.+.+++++|++.+..++..+..
T Consensus        42 f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSs  120 (349)
T KOG1443|consen   42 FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSS  120 (349)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccH
Confidence            44 88888888888877776665554433222   4677766654 4566665 88888999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHH
Q 037942          110 PAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIA  189 (369)
Q Consensus       110 pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~  189 (369)
                      ++|+.+++.++.-||+++.-      ..-++++.+|+.++++.+                          .+.+..|..+
T Consensus       121 i~FIllFs~if~lEk~~w~L------~l~v~lI~~Glflft~Ks--------------------------Tqf~i~Gf~l  168 (349)
T KOG1443|consen  121 ILFILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYKS--------------------------TQFNIEGFFL  168 (349)
T ss_pred             HHHHHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEecc--------------------------cceeehhHHH
Confidence            99999999999999999986      666777777888777532                          2456789999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhCC----CchHHHHHHHHHHHHHHHHHHHHhcccccc-----cccchh-hHHHHHHHHHH
Q 037942          190 IIASSISWAAWVIIQTKLSKKFP----APYTCTTLMCLISSIMCSVIGLIVERKRAA-----WKLNAT-IRLVSALYSGI  259 (369)
Q Consensus       190 ~l~a~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~-~~~~~l~~~gi  259 (369)
                      ...++++-++.-.+.+++.++.+    +|....+.......+.++|..+..|+....     +...++ ..+..+..++.
T Consensus       169 v~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l  248 (349)
T KOG1443|consen  169 VLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL  248 (349)
T ss_pred             HHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH
Confidence            99999999988888888776643    788888888888888888988877763211     221111 12333322222


Q ss_pred             HHhHHHHH---HHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942          260 VCSALAFC---LIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV  322 (369)
Q Consensus       260 ~~~~~~~~---~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  322 (369)
                       +...++.   .-+.-+.+++....++.+-..-+.+.+++.++.++.++...|.|..+...|+.+.
T Consensus       249 -~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  249 -GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             -HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence             2233333   2334567889999999999999999999999999999999999999999999988

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.64  E-value=1e-13  Score=122.67  Aligned_cols=292  Identities=13%  Similarity=0.069  Sum_probs=219.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDS-GMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGAT   84 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (369)
                      ..+...++..++.--...+..|..+.. +++ ...+...+.+.+.+.+...-..+- -+.++++++..+..+...++. .
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~lf-~   88 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLLF-V   88 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHHH-H
Confidence            344555555555555556667887764 233 233334787777777766544422 233457899999999999887 8


Q ss_pred             HHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCc
Q 037942           85 GNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSI  164 (369)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~  164 (369)
                      ++...-..+++|+++...+++....|+++++...+++|.++++..      +.++...++|.......+           
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d-----------  151 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTD-----------  151 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcccc-----------
Confidence            888888999999999999999999999999999999999888887      999998888888776422           


Q ss_pred             chhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcc-c---
Q 037942          165 HWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVER-K---  239 (369)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~---  239 (369)
                                     ...+..|..+++...++-+.+.+..|+..+..+ +.+..+++..+.+.........+++. +   
T Consensus       152 ---------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~  216 (314)
T KOG1444|consen  152 ---------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS  216 (314)
T ss_pred             ---------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH
Confidence                           133445999999999999999999998876422 45778999999998888777766553 1   


Q ss_pred             ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHH
Q 037942          240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGL  319 (369)
Q Consensus       240 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv  319 (369)
                      ...........+..+...++++.++.| +..++.+..++...++++..+-..+.+...++.|++.++...+|..+-++|-
T Consensus       217 ~~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~gg  295 (314)
T KOG1444|consen  217 LNFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGG  295 (314)
T ss_pred             hhcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhh
Confidence            111011223356666666776655555 6677899999999999998888888888888888889999999999999999


Q ss_pred             hhheecCCCCCCCC
Q 037942          320 YAVLWGKDKELKPD  333 (369)
Q Consensus       320 ~l~~~~~~~~~~~~  333 (369)
                      +++.+.+.++++.+
T Consensus       296 v~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  296 VLYSYATFRKKKQP  309 (314)
T ss_pred             hHHhhhhhhhccCC
Confidence            99988876654433

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.61  E-value=4.7e-14  Score=124.79  Aligned_cols=230  Identities=13%  Similarity=0.143  Sum_probs=169.8

Q ss_pred             CHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhh
Q 037942           68 TWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAM  147 (369)
Q Consensus        68 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  147 (369)
                      ++|+..++.+.+++. ++.+.+.+.++++++++..+++.++..+++++++++++|+|++++|      |.++++.++|+.
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence            567888888888886 9999999999999999999999999999999999999999999999      999999999999


Q ss_pred             hhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHH
Q 037942          148 VLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISS  226 (369)
Q Consensus       148 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~  226 (369)
                      ++...+......         +++.....+........|+++.++++++-++..++.+|..|+.. +.+.........+.
T Consensus        86 lv~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi  156 (244)
T PF04142_consen   86 LVQLSSSQSSDN---------SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGI  156 (244)
T ss_pred             eeecCCcccccc---------ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence            987543221100         00000001112456689999999999999999999999998754 33444555555555


Q ss_pred             HHHHHHHHHhcccc-cccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccc
Q 037942          227 IMCSVIGLIVERKR-AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLF  305 (369)
Q Consensus       227 i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~  305 (369)
                      ++.++.....+.+. .+......  +-...+.-++.+.++-.+....+||.+...=......+.+++.++++.+++.+++
T Consensus       157 ~~~~~~~~~~~~~~~~~~g~f~G--~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s  234 (244)
T PF04142_consen  157 LFNLLALLLSDGSAISESGFFHG--YSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPS  234 (244)
T ss_pred             HHHHHHHhcccccccccCCchhh--cchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence            55554443332211 11111111  1112233344566677777889999999999999999999999999999999999


Q ss_pred             hhhhHHHHHH
Q 037942          306 IGTAIGSVLI  315 (369)
Q Consensus       306 ~~~~~G~~li  315 (369)
                      ....+|..++
T Consensus       235 ~~f~lg~~~V  244 (244)
T PF04142_consen  235 LSFLLGAALV  244 (244)
T ss_pred             hHHhhheecC
Confidence            9999998653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.54  E-value=2.7e-13  Score=103.33  Aligned_cols=136  Identities=20%  Similarity=0.175  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942          186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA  265 (369)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~  265 (369)
                      ...+++++++.+++..++.|--.++ .||...+..+.++..+.+.......++ ++.....++..|..++..| +.++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSG-la~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSG-LAGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHH-HHHHHH
Confidence            5689999999999999999998887 477999999999988888776665543 2222223445788888877 578899


Q ss_pred             HHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942          266 FCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       266 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                      ..+|+++++..+++++.++..++|+++.+++++++||+++..+|+|+.+|++|+++...
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999887643

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.54  E-value=2.4e-14  Score=113.92  Aligned_cols=125  Identities=19%  Similarity=0.322  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhccc
Q 037942           18 LGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENS   97 (369)
Q Consensus        18 ~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~   97 (369)
                      ++||...++.|...++ .||....++|++.+.+ ++++....+++.....+++++......+.+....++.+++.+++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999886 9999999999999998 6666666555444567888899999999887799999999999999


Q ss_pred             chhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           98 TPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        98 ~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      +++.++++.++.|+++.+++++++||++++++      ++|+++++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998      999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.53  E-value=2.3e-14  Score=123.06  Aligned_cols=270  Identities=13%  Similarity=0.069  Sum_probs=205.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhc----CC--CCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhH
Q 037942           37 PLVLVAYRQMFATLATIPFAYFIEWK----TR--PKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILP  110 (369)
Q Consensus        37 ~~~~~~~r~~~~~l~l~~~~~~~~~~----~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p  110 (369)
                      |..+++.++++...+...+-....+-    ..  .+++.+..+.....+++. .+.-...+.+++|.+++.-.+-.++..
T Consensus        61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchhh
Confidence            88889999888877776665443221    11  124556666666666665 566666789999999999999999999


Q ss_pred             HHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHH
Q 037942          111 AITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAI  190 (369)
Q Consensus       111 i~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  190 (369)
                      +|+++++++++|+|-+...      ..++.+++.|-.+=...++                       ..+.-.+.|.+++
T Consensus       140 vFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvdqE~-----------------------~~~~ls~~GvifG  190 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVDQEG-----------------------STGTLSWIGVIFG  190 (347)
T ss_pred             hHHHHhHHhhccccccccc------ceeehhheehheecccccc-----------------------ccCccchhhhHHH
Confidence            9999999999999999987      7777777777665542111                       1356778999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcccccccc--cc-hhhHHHHHHHHHHHHhHHHH
Q 037942          191 IASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKRAAWK--LN-ATIRLVSALYSGIVCSALAF  266 (369)
Q Consensus       191 l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~gi~~~~~~~  266 (369)
                      +.|.++-|+..+..|+...... .-+..+++.++.+.++++|...+.+.-...+.  .. ....|..+...|+++..++|
T Consensus       191 VlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy  270 (347)
T KOG1442|consen  191 VLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY  270 (347)
T ss_pred             HHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999998765433 34778999999999999999887655222222  22 23356666666666554444


Q ss_pred             HHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCCCCCCCCCC
Q 037942          267 CLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIV  337 (369)
Q Consensus       267 ~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~~~~~~~  337 (369)
                       ...+-+|.++|.+-.+-....-..-.+++..+++|.-+...|-+-.++++|..++.+.|.++.+++.+++
T Consensus       271 -vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~  340 (347)
T KOG1442|consen  271 -VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQR  340 (347)
T ss_pred             -eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCC
Confidence             4445678899999999999999999999999999999999999999999999999998877655554443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.41  E-value=1e-12  Score=104.48  Aligned_cols=125  Identities=29%  Similarity=0.447  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHh
Q 037942          195 ISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQ  274 (369)
Q Consensus       195 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~  274 (369)
                      ++||.+.+..|+..++ .++....++++..+.+ .++.....+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4789999999999888 4679999999999998 666665544422  22223336777888888888999999999999


Q ss_pred             ccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942          275 RKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL  323 (369)
Q Consensus       275 ~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  323 (369)
                      +.+++.++++.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.36  E-value=2.1e-11  Score=105.39  Aligned_cols=283  Identities=13%  Similarity=0.125  Sum_probs=195.6

Q ss_pred             HHHHHHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-------------CCHHHHHHHHH
Q 037942           18 LGYAGMNFTSKLALD---SGM----KPLVLVAYRQMFATLATIPFAYFIEWKTRPK-------------ITWPILFQIFL   77 (369)
Q Consensus        18 ~~~g~~~~~~k~~~~---~g~----~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~   77 (369)
                      +.=.++.+.+|++-+   +|-    +|+.....-++.-++++..+.+++.|...+.             .+.+. ...+.
T Consensus        13 vsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~   91 (372)
T KOG3912|consen   13 VSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLP   91 (372)
T ss_pred             hhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecC
Confidence            334566777787643   123    3666666666666777777777765543321             01111 12233


Q ss_pred             HHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccc
Q 037942           78 CSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTF  157 (369)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~  157 (369)
                      ..+|- ..+..++|.++.+++++..+++.....+|+.+++.-+++.+++.+|      |+|+....+|++++...+  ..
T Consensus        92 Pal~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d--~~  162 (372)
T KOG3912|consen   92 PALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLD--VH  162 (372)
T ss_pred             hHHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeee--cc
Confidence            56666 6677889999999999999999999999999999999999999999      999999999999987432  11


Q ss_pred             cCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHh
Q 037942          158 GIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIV  236 (369)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~  236 (369)
                      .              ++.+...-++...|+++.+++-+.-|+.+++-+|..++.. +|.....|..+.+.+++..+....
T Consensus       163 ~--------------~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m  228 (372)
T KOG3912|consen  163 L--------------VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPM  228 (372)
T ss_pred             c--------------ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHH
Confidence            0              0111112256678999999999999999999988877644 889999999999966554444321


Q ss_pred             c----c------c---ccccc----cchhhHHHHHHHHHHHHhHHHHHHHH-HHHhccCcceeeehhhHHHHHHHHHHHH
Q 037942          237 E----R------K---RAAWK----LNATIRLVSALYSGIVCSALAFCLIV-WSIQRKGPLYVSVFSPLLLVIVAIVSWA  298 (369)
Q Consensus       237 ~----~------~---~~~~~----~~~~~~~~~l~~~gi~~~~~~~~~~~-~a~~~~~~~~~s~~~~~~pv~~~l~~~~  298 (369)
                      .    .      +   +.+|.    .........+...|...+..-|-+-- .-.|+.++++-..+-.+...+-.+++..
T Consensus       229 ~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~  308 (372)
T KOG3912|consen  229 YYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIA  308 (372)
T ss_pred             hheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHH
Confidence            1    1      0   11110    00001122233334333321111111 2346778888899999999999999999


Q ss_pred             HhcCccchhhhHHHHHHHHHHhhhee
Q 037942          299 LFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       299 ~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                      +..|.+...|+.|.++.+.|+++++.
T Consensus       309 m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  309 MGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999863

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.31  E-value=6.1e-10  Score=98.33  Aligned_cols=249  Identities=19%  Similarity=0.239  Sum_probs=175.3

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC--HHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHH
Q 037942           35 MKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT--WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCAL-TNILPA  111 (369)
Q Consensus        35 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi  111 (369)
                      =+|.+..+.-.+-+.++-+....+.+    +..+  .+.+...++.|++- .+.+...+.|+++.+++.+.++ ...+-+
T Consensus        10 G~~~~Q~lG~t~Gali~alv~~~~~~----p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv   84 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVVFLFRQ----PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV   84 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHhC----CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence            44666565555555555555544422    2233  47788888888887 9999999999999999999999 577777


Q ss_pred             HHHHHHHHhhhccccccccCCccce---ehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHH
Q 037942          112 ITFVLAVIFRQEYVAIKTKPGQAKV---FGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSI  188 (369)
Q Consensus       112 ~~~ll~~l~~~e~~~~~~~~~~~~~---~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  188 (369)
                      .+.++++++++|--+..+     +.   +++++.++|+.+....++++                  +...+..+..+|+.
T Consensus        85 g~sl~gv~~fgEW~~~~~-----~~~G~~Al~liiiGv~lts~~~~~~------------------~~~~~~~~~~kgi~  141 (269)
T PF06800_consen   85 GTSLIGVLFFGEWTTTTQ-----KIIGFLALVLIIIGVILTSYQDKKS------------------DKSSSKSNMKKGIL  141 (269)
T ss_pred             HHHHHHHhhcCCCCCcch-----HHHHHHHHHHHHHHHHHhccccccc------------------cccccccchhhHHH
Confidence            799999999999877665     22   35667777887776533221                  11112456678999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHH
Q 037942          189 AIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCL  268 (369)
Q Consensus       189 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~  268 (369)
                      ..+++.+.|..|.+.-|...   .+++....-+.+...+..+.+....++.  .+.   ...|..++ .|++ -.++..+
T Consensus       142 ~Ll~stigy~~Y~~~~~~~~---~~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~~---k~~~~nil-~G~~-w~ignl~  211 (269)
T PF06800_consen  142 ALLISTIGYWIYSVIPKAFH---VSGWSAFLPQAIGMLIGAFIFNLFSKKP--FFE---KKSWKNIL-TGLI-WGIGNLF  211 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhcC---CChhHhHHHHHHHHHHHHHHHhhccccc--ccc---cchHHhhH-HHHH-HHHHHHH
Confidence            99999999999999977743   2556666666555544444444433111  111   11333333 3443 3578888


Q ss_pred             HHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchh----hhHHHHHHHHHHhh
Q 037942          269 IVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIG----TAIGSVLIVTGLYA  321 (369)
Q Consensus       269 ~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~----~~~G~~li~~gv~l  321 (369)
                      +..+.++.+.+..-.+..+.++++.+.+.+++||+=+..    .++|.++++.|.++
T Consensus       212 ~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  212 YLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999998765    44688888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.30  E-value=5.3e-11  Score=107.26  Aligned_cols=134  Identities=16%  Similarity=0.255  Sum_probs=114.5

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhh
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKP--LVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTG   82 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   82 (369)
                      ...+|..++++++++|+...+..|...++ .++  .....+++.++.+++.++....++.  ...+.+++...+..++++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence            34679999999999999999999998764 664  4555578999999888887664322  234677888888888888


Q ss_pred             hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhh
Q 037942           83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAM  147 (369)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  147 (369)
                      ...++.+++.++++.+++.++.+.++.|+++.++++++++|+++..+      ++|+.+.+.|+.
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence            78999999999999999999999999999999999999999999998      999999998863

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.29  E-value=2e-11  Score=102.02  Aligned_cols=271  Identities=15%  Similarity=0.116  Sum_probs=193.1

Q ss_pred             HHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHh
Q 037942           27 SKLALDS-GMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCA  104 (369)
Q Consensus        27 ~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~  104 (369)
                      .|+.... |++ -+.+.+.+.+.+.+-++.+-+.+-.+    .+.++...+...+++. +...+.--.+++|.+....++
T Consensus        25 NKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~----fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpiYTi   99 (309)
T COG5070          25 NKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE----FRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVPIYTI   99 (309)
T ss_pred             hHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh----eehhhhhhhcCHHHHH-HHHHHhcccceeeeeeeHHHH
Confidence            3554432 344 45666777776666665553332222    2233333444455555 455556678999999999999


Q ss_pred             hhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccch
Q 037942          105 LTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLI  184 (369)
Q Consensus       105 l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (369)
                      +.++..+.++....+++|.|.+...      ..+.++.+..-+...+.+.+...                   -.....+
T Consensus       100 FKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~~-------------------~~~~~lN  154 (309)
T COG5070         100 FKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQASA-------------------FKAQILN  154 (309)
T ss_pred             hccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHHH-------------------HHhcccC
Confidence            9999999999999999999999887      88888777777766653321110                   0124567


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhh--CCCchHHHHHHHHHHHHHHHHHHHHhcc-ccccccc-chhhHHHHHHHHHHH
Q 037942          185 LGSIAIIASSISWAAWVIIQTKLSKK--FPAPYTCTTLMCLISSIMCSVIGLIVER-KRAAWKL-NATIRLVSALYSGIV  260 (369)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~~~gi~  260 (369)
                      .|.+++...++.-+.+....|+-.+-  ..+ ...++|.++.+..+++.+.++.+. +...... ........+...|+.
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d-~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~  233 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKD-FDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC  233 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccch-hhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH
Confidence            89999999999999999999876542  224 789999999999998888887654 1111111 111134455555654


Q ss_pred             HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942          261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  329 (369)
                       ++.--++..+.++.++.+..++++.++-.-..+-|.++++|+.+...+..+.+-..+..++...+.++
T Consensus       234 -svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k  301 (309)
T COG5070         234 -SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKK  301 (309)
T ss_pred             -HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             44444578889999999999999999999999999999999999999999999888888777766543

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.29  E-value=5.9e-11  Score=102.49  Aligned_cols=265  Identities=11%  Similarity=0.049  Sum_probs=181.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcc-cchhhHHhhhhhhHHHHHH
Q 037942           37 PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLEN-STPTIGCALTNILPAITFV  115 (369)
Q Consensus        37 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~l  115 (369)
                      -..++|.++++-++--+++.--.. ..+++++.|++...+.   .. ...+.+.++++++ ++...-.++.+-.++.+++
T Consensus        33 gNLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~---mF-F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~  107 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVA---MF-FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI  107 (330)
T ss_pred             eeehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehh---ee-eeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence            366777777665554444321111 1224556666544332   22 4566778899998 8888888889999999999


Q ss_pred             HHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHH
Q 037942          116 LAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSI  195 (369)
Q Consensus       116 l~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  195 (369)
                      +++++.|+|.+.+|      ..++++..+|+++.++.+.++...  +...+.+     ++..........|+.+..+|.+
T Consensus       108 ~g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l~~-----~~~~~~~~~w~iGi~lL~~al~  174 (330)
T KOG1583|consen  108 LGWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS--KLSGLDS-----GSAQSDFFWWLIGIALLVFALL  174 (330)
T ss_pred             HHHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh--hhccccc-----CcccccchHHHHHHHHHHHHHH
Confidence            99999999999999      999999999999998765443221  1111111     1112234466789999999999


Q ss_pred             HHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhccc-cccc--------------ccchhhHHHHHHHHHH
Q 037942          196 SWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERK-RAAW--------------KLNATIRLVSALYSGI  259 (369)
Q Consensus       196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~--------------~~~~~~~~~~l~~~gi  259 (369)
                      .-|...+.++..-++++ ++-...+|....+...++..    ..+ ..+|              ...-+..|..++. -+
T Consensus       175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~----~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~-n~  249 (330)
T KOG1583|consen  175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM----GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF-NV  249 (330)
T ss_pred             HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh----cchHHHHHHHHhcCcceeccccCccccHHHHHHHH-HH
Confidence            99999998888777655 66789999998885554332    211 0111              1112334555444 22


Q ss_pred             HHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942          260 VCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                      +.+..+.--.+..-.+.++-++++...+.-.++.+++++.|+.++++.-|+|..+++.|.+++..
T Consensus       250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            23333332333344567888999999999999999999999999999999999999999888853

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.28  E-value=2.9e-10  Score=103.69  Aligned_cols=278  Identities=15%  Similarity=0.125  Sum_probs=159.7

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CCCHHH-HHHHHHHHHh
Q 037942            4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-KITWPI-LFQIFLCSVT   81 (369)
Q Consensus         4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~   81 (369)
                      .+...|..+++.++++-+....+-|....+ .+.                       ...+. ...+++ ..+.+..|++
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHH
Confidence            356889999999999999999999987543 110                       00000 001111 2234556666


Q ss_pred             hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942           82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN  161 (369)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~  161 (369)
                      ...++..+.+.|+.+.|++..+++..+.-++.++++.+++|||+++++      +.|..+++.|..++....+.+... +
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~~~-~  131 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEEPI-H  131 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCCCc-C
Confidence            667888889999999999999999999999999999999999999999      999999999999877543222100 0


Q ss_pred             CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHH---HHH-Hhc
Q 037942          162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSV---IGL-IVE  237 (369)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~-~~~  237 (369)
                           +.+    +-.+.-.+.......... ..++..+.....++..++  +.........++++...+.   +.. ...
T Consensus       132 -----t~~----~l~~~~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~  199 (300)
T PF05653_consen  132 -----TLD----ELIALLSQPGFLVYFILV-LVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKL  199 (300)
T ss_pred             -----CHH----HHHHHhcCcceehhHHHH-HHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHH
Confidence                 000    000000011111111111 112222222222222221  2121111111222211111   110 111


Q ss_pred             c--cccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHH-HHHHHHHhcCcc--ch----hh
Q 037942          238 R--KRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIV-AIVSWALFQEKL--FI----GT  308 (369)
Q Consensus       238 ~--~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~-~l~~~~~~~e~~--~~----~~  308 (369)
                      .  ...++.  .+..|..+ ..-+.+........++++++.+++.+.++.+..-... .+-|.++++|..  +.    ..
T Consensus       200 ~~~g~~~f~--~~~~y~l~-~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~  276 (300)
T PF05653_consen  200 TFSGDNQFT--YPLTYLLL-LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGF  276 (300)
T ss_pred             HhcCchhhh--hhHHHHHH-HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHH
Confidence            1  111222  22234333 3334456677788999999999999888877665554 455666778754  44    44


Q ss_pred             hHHHHHHHHHHhhheecCC
Q 037942          309 AIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       309 ~~G~~li~~gv~l~~~~~~  327 (369)
                      ..|..+++.|+++....|.
T Consensus       277 ~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  277 LCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHHhhheeeccCc
Confidence            5688889999988865543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.25  E-value=4.5e-11  Score=98.13  Aligned_cols=212  Identities=15%  Similarity=0.162  Sum_probs=157.9

Q ss_pred             HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942           84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS  163 (369)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  163 (369)
                      ++.++.|..|++.++++.++.+..+...|+.+++++++|+|+...+      +++.++++.|++++.+.+.         
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN---------  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADN---------  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccc---------
Confidence            7888999999999999999999999999999999999999999997      9999999999999985332         


Q ss_pred             cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHH-----HHHHHHHHHhcc
Q 037942          164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISS-----IMCSVIGLIVER  238 (369)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~  238 (369)
                                     .....+.|+.+++.+++..++|-++.|+...+-+ --....++...+.     +..-++.+.. .
T Consensus       129 ---------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~-T  191 (290)
T KOG4314|consen  129 ---------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAF-T  191 (290)
T ss_pred             ---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHH-h
Confidence                           2356789999999999999999999999876522 1112222222211     1111222211 2


Q ss_pred             cccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHH
Q 037942          239 KRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTG  318 (369)
Q Consensus       239 ~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g  318 (369)
                      ...+|.......|..+...+.+.. .-.++.+.++....|...++-+.....--..++.++-+-..+....+|.++++.|
T Consensus       192 ~VE~~qsFA~~PWG~l~G~A~L~l-AFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~  270 (290)
T KOG4314|consen  192 GVEHLQSFAAAPWGCLCGAAGLSL-AFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG  270 (290)
T ss_pred             chHHHHHHhhCCchhhhhHHHHHH-HHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            223333222335676766665543 3345677889999999999999888888899997666666789999999999999


Q ss_pred             HhhheecCCC
Q 037942          319 LYAVLWGKDK  328 (369)
Q Consensus       319 v~l~~~~~~~  328 (369)
                      .++....+.+
T Consensus       271 FiLiiiP~d~  280 (290)
T KOG4314|consen  271 FILIIIPEDK  280 (290)
T ss_pred             HHheecccch
Confidence            9988765544

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.24  E-value=4.4e-09  Score=96.63  Aligned_cols=301  Identities=13%  Similarity=0.104  Sum_probs=181.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHH-HHHHHHHHHH-HHHHHhhh---cCCCCCCHHHHHHHHHHH
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAY-RQMFATLATI-PFAYFIEW---KTRPKITWPILFQIFLCS   79 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~-r~~~~~l~l~-~~~~~~~~---~~~~~~~~~~~~~~~~~g   79 (369)
                      +-..|+++.+++.++||+.++-.|+ .++ .+-... +. ..+++.++.- ....+..+   ......+.+.+...++.|
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCC-CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            5578999999999999999999998 332 442221 11 1111111111 00001001   111134677788888888


Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccc---cccccCCccceehhhhhhhhhhhhhhhcCc
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYV---AIKTKPGQAKVFGTIICVGGAMVLSFYHGK  155 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~  155 (369)
                      ++- .+.+.+++.++++...+.+..+ ..+.-++..++..++++|=.   +..+  +..-.+|++++++|+++...-...
T Consensus        81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence            887 9999999999999999999888 88889999999999988643   2221  112267888888999988852111


Q ss_pred             cccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHH-------HHHHHhhhhCCCchHHHHHHHH---HH
Q 037942          156 TFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWV-------IIQTKLSKKFPAPYTCTTLMCL---IS  225 (369)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~---~~  225 (369)
                      ..            ++ .++++.+..+..+|+++++++++.+++|.       ...+...+...++.....-+..   .+
T Consensus       158 k~------------~~-~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G  224 (345)
T PRK13499        158 KE------------RK-MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGG  224 (345)
T ss_pred             cc------------cc-cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHH
Confidence            10            00 00001235678899999999999999999       4433322121233333333333   33


Q ss_pred             HHHHHHH-HHH---hccccc---ccccch---hhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeee---hh-hHHHHH
Q 037942          226 SIMCSVI-GLI---VERKRA---AWKLNA---TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSV---FS-PLLLVI  291 (369)
Q Consensus       226 ~i~~~~~-~~~---~~~~~~---~~~~~~---~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~---~~-~~~pv~  291 (369)
                      ..+.-+. ...   .+++..   +.....   ......-+..|+ .=.+++.++..+-++.+......   +. .+..++
T Consensus       225 ~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vii  303 (345)
T PRK13499        225 GAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLC  303 (345)
T ss_pred             HHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHH
Confidence            3322221 111   111111   111110   011111133343 34567777777777776554444   44 788899


Q ss_pred             HHHHHHHHhcCccc------hhhhHHHHHHHHHHhhheecC
Q 037942          292 VAIVSWALFQEKLF------IGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       292 ~~l~~~~~~~e~~~------~~~~~G~~li~~gv~l~~~~~  326 (369)
                      +.+.+. ++||.=+      ...++|++++++|..+...++
T Consensus       304 stlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        304 GNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             HHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            999998 5999866      567899999999988876553

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.18  E-value=7.8e-10  Score=95.31  Aligned_cols=261  Identities=14%  Similarity=0.138  Sum_probs=192.4

Q ss_pred             CCCh--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHH
Q 037942           34 GMKP--LVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPA  111 (369)
Q Consensus        34 g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi  111 (369)
                      |++|  +.+++.++.+-..+.+..+...+.+ +...+   |+.+..++.+. ...+.+.+-++.|++-..-.++.++.-+
T Consensus        70 gfkp~GWylTlvQf~~Ysg~glie~~~~~~k-~r~iP---~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKli  144 (367)
T KOG1582|consen   70 GFKPFGWYLTLVQFLVYSGFGLIELQLIQTK-RRVIP---WRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLI  144 (367)
T ss_pred             cCcccchHHHHHHHHHHHhhhheEEEeeccc-ceecc---hhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhh
Confidence            5663  5666777665544444433222222 22234   44456666666 6777788899999998888888999999


Q ss_pred             HHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHH
Q 037942          112 ITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAII  191 (369)
Q Consensus       112 ~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l  191 (369)
                      -+++.+.++-+.|.++.+      .++..+...|+++....+...                      +...+..|+.+.-
T Consensus       145 PVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~~----------------------sPNF~~~Gv~mIs  196 (367)
T KOG1582|consen  145 PVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQT----------------------SPNFNLIGVMMIS  196 (367)
T ss_pred             hhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhccccc----------------------CCCcceeeHHHHH
Confidence            999999999999999998      999999999999998754332                      3466788999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhccccccccc---chhhHHHHHHHHHHHHhHHHHH
Q 037942          192 ASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKRAAWKL---NATIRLVSALYSGIVCSALAFC  267 (369)
Q Consensus       192 ~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~~~~~  267 (369)
                      .|.++.|.-.-.+++..+..+ +...+.++...++.+.++......+.-...|+.   ++..........+. .+.++..
T Consensus       197 gALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~  275 (367)
T KOG1582|consen  197 GALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIV  275 (367)
T ss_pred             HHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHH
Confidence            999999987777777766544 446678888888888877766655554444432   12112333333333 3456666


Q ss_pred             HHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942          268 LIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK  328 (369)
Q Consensus       268 ~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  328 (369)
                      ....-++..++..++.+....-.+++++++++|..++|.+..-|..+++.|+++..+.+++
T Consensus       276 ~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  276 FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            6666778889999999999999999999999999999999999999999999999888743

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.16  E-value=6.9e-11  Score=92.30  Aligned_cols=105  Identities=15%  Similarity=0.269  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC--CCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHH
Q 037942           42 AYRQMFATLATIPFAYFIEWKT--RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVI  119 (369)
Q Consensus        42 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l  119 (369)
                      .+|+..+.+++..+...+++.+  .+..+.+.+.+....|.++...++.+++.|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            4788999999888877744321  11234466677777788886689999999999999 58889999999999999999


Q ss_pred             hhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942          120 FRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH  153 (369)
Q Consensus       120 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~  153 (369)
                      ++|||+++++      +++++++++|++++...+
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWSD  108 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhhh
Confidence            9999999998      999999999999998643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.16  E-value=7.7e-10  Score=101.48  Aligned_cols=137  Identities=15%  Similarity=0.114  Sum_probs=113.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN   86 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (369)
                      ..|.++.++++++|+...+..|...++ .++..... ...++++++.++......  ....++..+...+..|++...+.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999999999999988764 78877654 456666666666554322  22245566666678899988999


Q ss_pred             HHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942           87 QVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH  153 (369)
Q Consensus        87 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~  153 (369)
                      +.++++++++.+++.++++.++.|+++.++++++++|+++..+      ++|..+.+.|++......
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999      999999999999987543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.14  E-value=1.2e-09  Score=90.05  Aligned_cols=138  Identities=23%  Similarity=0.202  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhh------CCCchHHHHHHHHHHHHHHHHHHHHhccccccc-----cc---c-hhhH
Q 037942          186 GSIAIIASSISWAAWVIIQTKLSKK------FPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW-----KL---N-ATIR  250 (369)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~---~-~~~~  250 (369)
                      |.++++.+.++.+++.++.|+..++      ..++.....+....+.+.+++.....|......     ..   . ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999998776      238899999999999999999888776532111     10   0 2234


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942          251 LVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       251 ~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                      +..++..|++ .....+..+..+++.+|...++...++.+...++++++++|+++..+++|+++.++|++++++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555555554 456667888899999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.11  E-value=1.2e-09  Score=100.21  Aligned_cols=137  Identities=11%  Similarity=0.026  Sum_probs=115.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN   86 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (369)
                      ..|.++.++++++|+...+..|...+  -++.....+++.++.+.+.++............+.+.|...+..++++..+.
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999998543  3455667788888888887776553222111235678888888999888899


Q ss_pred             HHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942           87 QVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus        87 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      +.+++.++++.+++.++++.++.|++++++++++++|+++..+      ++|.++.+.|+.+...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998      9999999999998874

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.11  E-value=1.9e-09  Score=99.07  Aligned_cols=139  Identities=13%  Similarity=0.126  Sum_probs=110.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccc--cchhhHHHHHHHHH
Q 037942          181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWK--LNATIRLVSALYSG  258 (369)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g  258 (369)
                      ++..+|++++++++++|+...+..|.. .+ -+|....++++.++.+.+.++.....+ .....  ..+...+ .....+
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~   79 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVS   79 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHH
Confidence            345689999999999999999999875 44 467999999999998877766543322 11111  1111122 233356


Q ss_pred             HHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942          259 IVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL  323 (369)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  323 (369)
                      .+.....+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            66677889999999999999999999999999999999999999999999999999999998775

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.08  E-value=2.7e-09  Score=97.36  Aligned_cols=134  Identities=16%  Similarity=0.151  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHH
Q 037942          187 SIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAF  266 (369)
Q Consensus       187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~  266 (369)
                      ..+.+.++++++..+++.|+..++ .++  ...+......+.+.|....... ...++.... .++..+..+.+.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence            467899999999999999987766 232  3455666666666666553211 122332222 34444444555677888


Q ss_pred             HHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheec
Q 037942          267 CLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWG  325 (369)
Q Consensus       267 ~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~  325 (369)
                      .++++++++.+++.++++.+++|+++.+++++++||+++..+++|..+++.|+.+....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999887643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.08  E-value=3.1e-09  Score=99.57  Aligned_cols=138  Identities=9%  Similarity=0.087  Sum_probs=105.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCHHHHHHHHHHHHh
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKP-LVLVAYRQMFATLATIPFAYFIEWKTRP----KITWPILFQIFLCSVT   81 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~-~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~   81 (369)
                      ..|..+++.++++|+...++.|..... .++ ...+++...++.+.+.+......+...+    ..+... ...+..++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHH
Confidence            448899999999999999999987664 654 4666677777766665555543322111    122222 223444554


Q ss_pred             hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942           82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH  153 (369)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~  153 (369)
                       ..+++.++++++++.+++.+++..++.|++++++++++++|+++..+      ++|.++++.|+.+....+
T Consensus       266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGK  330 (358)
T ss_pred             -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhh
Confidence             36788899999999999999999999999999999999999999999      999999999999988544

>TIGR00688 rarD rarD protein

Probab=99.05  E-value=3.6e-09  Score=95.12  Aligned_cols=136  Identities=13%  Similarity=0.148  Sum_probs=107.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccc---cccccchhhH-HHHHHHHHHH
Q 037942          185 LGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR---AAWKLNATIR-LVSALYSGIV  260 (369)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~gi~  260 (369)
                      +|..+.++++++|+...+..|.. .+ -+|.+..+++++++.+.+.++.....+..   ..++...... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            48899999999999999999984 44 47799999999999888766554332211   1111111112 3344444544


Q ss_pred             HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942          261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL  323 (369)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  323 (369)
                       ....+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             56888999999999999999999999999999999999999999999999999999988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.01  E-value=4.6e-09  Score=96.45  Aligned_cols=134  Identities=10%  Similarity=0.137  Sum_probs=105.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN   86 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (369)
                      ..|.++++.++++|+...++.|...++ .++....+   ..+.+++.+...... ......+...|...+..++. ..+.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence            458899999999999999999987654 77765432   223333333222221 11123566777777777754 4889


Q ss_pred             HHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942           87 QVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY  152 (369)
Q Consensus        87 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  152 (369)
                      +.+++.++++.+++.++.+.++.|++..++++++++|+++..+      ++|+++++.|+.+....
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhhh
Confidence            9999999999999999999999999999999999999999999      99999999999888753

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.98  E-value=1.2e-09  Score=96.80  Aligned_cols=279  Identities=13%  Similarity=0.130  Sum_probs=166.2

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhh
Q 037942            4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGA   83 (369)
Q Consensus         4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   83 (369)
                      .+...|.++++.+.++.|.+.++-|+...+ ...   ..               . +....+..-.++  +.+..|++..
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~-ra~~gg~~yl~~--~~Ww~G~ltm   74 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------L-RAGEGGYGYLKE--PLWWAGMLTM   74 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------c-cccCCCcchhhh--HHHHHHHHHH
Confidence            456788999999999999999999987664 111   00               0 111111111122  4455677777


Q ss_pred             HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942           84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS  163 (369)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  163 (369)
                      .++....+.|+.+.|++..+++..+..+..++++..++|||++...      .+|+++|++|-.+++.. .+...     
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~h-aP~e~-----  142 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIH-APKEQ-----  142 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEe-cCccc-----
Confidence            8889999999999999999999999999999999999999999999      99999999999999864 33211     


Q ss_pred             cchhhhhcccccccCCCccchhHHHH-HHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHH---HHHHhc--
Q 037942          164 IHWKYAEKMSEENSGNKSNLILGSIA-IIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSV---IGLIVE--  237 (369)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~-~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~--  237 (369)
                      -.       .+..+........+.+. ..+-.....+-....|.. +.+.+.+.......++++.....   +.....  
T Consensus       143 ~i-------~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~p~-~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt  214 (335)
T KOG2922|consen  143 EI-------ESVEEVWELATEPGFLVYVIIIILIVLILIFFYAPR-YGQTNILVYIGICSLIGSLTVMSVKALGIAIKLT  214 (335)
T ss_pred             cc-------ccHHHHHHHhcCccHHHHHHHHHHHHHHHheeeccc-ccccceeehhhHhhhhcceeeeeHHHHHHHHHHH
Confidence            00       00000011111112111 111111111111111111 11124444444444444222111   111000  


Q ss_pred             -ccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHH-HHHHHHHHHHHhcCcc--ch----hhh
Q 037942          238 -RKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLL-LVIVAIVSWALFQEKL--FI----GTA  309 (369)
Q Consensus       238 -~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~-pv~~~l~~~~~~~e~~--~~----~~~  309 (369)
                       .+..+..  .+..|..++.+. .+........++|++..+++.++++.+.. ..++++-+.++|+|--  +.    .+.
T Consensus       215 ~~g~~ql~--~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~  291 (335)
T KOG2922|consen  215 FSGNNQLF--YPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGEL  291 (335)
T ss_pred             hcCCcccc--cHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence             1111121  122444444444 35667778889999999999888877654 4556666888888753  32    466


Q ss_pred             HHHHHHHHHHhhheecCC
Q 037942          310 IGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       310 ~G~~li~~gv~l~~~~~~  327 (369)
                      .|+..++.|+.+....|.
T Consensus       292 ~Gf~ti~~G~flL~~~kd  309 (335)
T KOG2922|consen  292 CGFVTIFLGIFLLHRTKD  309 (335)
T ss_pred             HhHHHhhheeeEeeeecc
Confidence            788899999888854443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.89  E-value=4.1e-08  Score=90.36  Aligned_cols=139  Identities=11%  Similarity=0.181  Sum_probs=108.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCCCCHHHHHHHHHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMK---PLVLVAYRQMFATLATIPFAYFIEWKT-----RPKITWPILFQIFLC   78 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~---~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~   78 (369)
                      ..|.+++++++++|+...++.|...+. .+   .....++....+.+.+.......+...     ....+...|...+..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            469999999999999999999986543 32   233344444444443333322222111     123466788888999


Q ss_pred             HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942           79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY  152 (369)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  152 (369)
                      +++...+.+.+++.++++.+++.++.+..+.|++..++++++++|+++..+      ++|.++.++|+.+...+
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhcc
Confidence            999989999999999999999999999999999999999999999999999      99999999999987643

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.86  E-value=8.2e-08  Score=76.12  Aligned_cols=122  Identities=13%  Similarity=0.129  Sum_probs=92.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHH
Q 037942          185 LGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSAL  264 (369)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~  264 (369)
                      .|.++.+.+.++-+...++.|+-.++.++ ...... .    ... ....           .   .....+++|++++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~~-~~~~-----------~---~p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IAA-LLAF-----------G---LALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HHH-HHHH-----------h---ccHHHHHHHHHHHHH
Confidence            47788999999999999999988776443 221111 0    000 0000           0   012245668888999


Q ss_pred             HHHHHHHHHhccCcceeeehhhHHHHHHHHHHHH--HhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942          265 AFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWA--LFQEKLFIGTAIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       265 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~--~~~e~~~~~~~~G~~li~~gv~l~~~~~~  327 (369)
                      ++++|.+++++.+.+.+.++....+++..+.++.  ++||++++.+++|.++|++|+++..+.++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999999888888875  79999999999999999999999875443

>TIGR00803 nst UDP-galactose transporter

Probab=98.86  E-value=1.1e-08  Score=89.91  Aligned_cols=210  Identities=11%  Similarity=0.053  Sum_probs=128.3

Q ss_pred             chhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCC--CCCcchhhhhccccc
Q 037942           98 TPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIP--NSSIHWKYAEKMSEE  175 (369)
Q Consensus        98 ~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~  175 (369)
                      +........+..++++++.++...++|.+..+      +++.++...|+......+.+.....  .... ...+.+..+.
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~-~~~~~~~~~~   75 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGV-AIVQMVQSSA   75 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhH-eeeecCCCCc
Confidence            34445667788889999999888888888555      8888888888876554322110000  0000 0000000000


Q ss_pred             ccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHH----HHHh-cccc-cccc--cch
Q 037942          176 NSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVI----GLIV-ERKR-AAWK--LNA  247 (369)
Q Consensus       176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~-~~~~-~~~~--~~~  247 (369)
                      ..........|....+.+.++-+...+..++..++.+..    .|..........+.    .... +.+. ..+.  ...
T Consensus        76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (222)
T TIGR00803        76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGY  151 (222)
T ss_pred             cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCC
Confidence            011123557788888888888888888888876653321    22222222211111    1111 1110 1111  111


Q ss_pred             hhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942          248 TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV  322 (369)
Q Consensus       248 ~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  322 (369)
                      +...+.+    ++...++..+..+.+++.++...+....++++++.+++++++||+++..++.|..+++.|++++
T Consensus       152 ~~~~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       152 PTAVWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             chHHHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            1122222    2345667778889999999999999999999999999999999999999999999999997653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.84  E-value=2.9e-08  Score=77.44  Aligned_cols=108  Identities=20%  Similarity=0.353  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHH
Q 037942          220 LMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL  299 (369)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~  299 (369)
                      ++...+.+.+..+.....+....++......+...+..|++....++.++.++.++.+ ..++++..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            4555666666555554333211122111223445555566666688999999999999 588899999999999999999


Q ss_pred             hcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942          300 FQEKLFIGTAIGSVLIVTGLYAVLWGKDK  328 (369)
Q Consensus       300 ~~e~~~~~~~~G~~li~~gv~l~~~~~~~  328 (369)
                      ++|+++..+++|.+++++|+.+..+.+-+
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999999876543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.82  E-value=2e-08  Score=92.63  Aligned_cols=141  Identities=18%  Similarity=0.206  Sum_probs=108.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC---------CH-HHHHH
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALDS-GMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKI---------TW-PILFQ   74 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~~-~~~~~   74 (369)
                      ...|.++.++++++|+...+..|...++ +.++..+.++....+.+.++++....+.......         .. ..+..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            3569999999999999999999987661 3899999999999999999888765331110000         00 11111


Q ss_pred             HHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942           75 IFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY  152 (369)
Q Consensus        75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  152 (369)
                      .+..+.......+.+++.+++++++..+++.....|+++.++++++++|+++..+      ++|.++++.|+.+....
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHHH
Confidence            2233332323444677789999999999999999999999999999999999999      99999999999988743

specificities overlap.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.80  E-value=1.6e-09  Score=92.30  Aligned_cols=276  Identities=18%  Similarity=0.203  Sum_probs=190.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHH
Q 037942            8 MPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQ   87 (369)
Q Consensus         8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (369)
                      ..++.+++-++.||+.+.+....   |=+|.+.+..-.+-+.++.+.+.++ .   .|..+.+.+...++.|.+- ...+
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~---~p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-V---SPELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-e---cCccchhhHHHHHHhhhHh-hhhh
Confidence            35788999999999988877543   5668887777666666666655444 2   2345677777777777766 8999


Q ss_pred             HHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccce---ehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942           88 VLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKV---FGTIICVGGAMVLSFYHGKTFGIPNSS  163 (369)
Q Consensus        88 ~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~---~g~~l~~~Gv~l~~~~~~~~~~~~~~~  163 (369)
                      ...+.|+++.+++.+.++ ..++-+-+.+++++.++|=.+..+     +.   +++++.++|+.+-...+          
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~----------  138 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQD----------  138 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeec----------
Confidence            999999999999999999 666777799999999999666554     12   23334445555444322          


Q ss_pred             cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccccc
Q 037942          164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW  243 (369)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  243 (369)
                              .++..+++.++..+|+...+.+.+.|-.|.++.+.+.-+   .+....-+.....+..+.+......  ...
T Consensus       139 --------~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~saiLPqAiGMv~~ali~~~~~~~--~~~  205 (288)
T COG4975         139 --------RNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAILPQAIGMVIGALILGFFKME--KRF  205 (288)
T ss_pred             --------cccccccChHhhhhheeeeeeeccceeeeEeeecccccc---chhhhhHHHHHHHHHHHHHhhcccc--cch
Confidence                    123334456677899999999999999999998776532   2334333333333333333332211  011


Q ss_pred             ccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhh----hHHHHHHHHHH
Q 037942          244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGT----AIGSVLIVTGL  319 (369)
Q Consensus       244 ~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~----~~G~~li~~gv  319 (369)
                         +. ..+.-+..|++- .++..++..+-++.+.++.=.++.+..+++.+-++++++|+=|..|    ++|.+++++|.
T Consensus       206 ---~K-~t~~nii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvga  280 (288)
T COG4975         206 ---NK-YTWLNIIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGA  280 (288)
T ss_pred             ---HH-HHHHHHhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHh
Confidence               12 223333445543 4778888889999999999999999999999999999999998765    46888888887


Q ss_pred             hhhee
Q 037942          320 YAVLW  324 (369)
Q Consensus       320 ~l~~~  324 (369)
                      .+...
T Consensus       281 i~lg~  285 (288)
T COG4975         281 ILLGI  285 (288)
T ss_pred             hhhhe
Confidence            76644

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.70  E-value=3.4e-07  Score=75.45  Aligned_cols=133  Identities=20%  Similarity=0.303  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC----C-------CHHH
Q 037942            9 PFLAMVTVQLGYAGMNFTSKLALDS------GMKPLVLVAYRQMFATLATIPFAYFIEWKTRPK----I-------TWPI   71 (369)
Q Consensus         9 g~~~~l~~~~~~g~~~~~~k~~~~~------g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~   71 (369)
                      |.++++.+.++.+...+..|...++      +.++..+..+....+.+++.+.....+......    .       +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5788999999999999999988765      688999999999999999999888765433110    0       2244


Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhh
Q 037942           72 LFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMV  148 (369)
Q Consensus        72 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  148 (369)
                      +...+..|++. ...+...+..++++++...+++.....+.+.++++++++|+++..+      ++|+++++.|+.+
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence            55555566666 7888999999999999999999999999999999999999999998      9999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.66  E-value=7.8e-07  Score=83.57  Aligned_cols=140  Identities=15%  Similarity=0.090  Sum_probs=104.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHh
Q 037942          183 LILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCS  262 (369)
Q Consensus       183 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~  262 (369)
                      +..-..+.+.--.+-..++...|...+..+-|+.++.+++.++.+.+..+......+.+... ..+..+..++.+|++..
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH
Confidence            44444555555555566777888888876548999999999998776544322111111121 12225667777777654


Q ss_pred             HHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942          263 ALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       263 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                       ..+...+.++++.+++.++++..++|++++++++++++|+++..++.|.+++++|+.+...
T Consensus       126 -~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        126 -FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             -HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence             4566677999999999999999999999999999999999999999999999999998764

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.65  E-value=4.1e-07  Score=80.16  Aligned_cols=143  Identities=13%  Similarity=0.148  Sum_probs=114.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccc-cchhhHHHHHHHHHHH
Q 037942          182 NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWK-LNATIRLVSALYSGIV  260 (369)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~  260 (369)
                      ....|+++++.|.+.|+..-.+.|.+.+.  ++.....++.+.+..+++.+.....+...-+. ...+..+..+...+++
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            34589999999999999999999887544  56889999999998887766665443221122 2223355555555554


Q ss_pred             HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942          261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  327 (369)
                       ....+..+.++.++.....+|.-.+++|++.+++|.++++|+++..|++..++..+|+....+...
T Consensus        82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence             457889999999999999999999999999999999999999999999999999999998876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.62  E-value=5.8e-07  Score=82.22  Aligned_cols=129  Identities=13%  Similarity=0.173  Sum_probs=103.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH----HHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhh
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQM----FATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTG   82 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   82 (369)
                      .+|+++.+++.+.++...+..|..   +.+|...++.+..    .+.+++.++   +  +.++ .+.+.....++.|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKP-LKKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccc-hHHHHHHHHHHHHHHH
Confidence            679999999999999999999965   3788888655555    334333333   1  1122 2334444555588885


Q ss_pred             hHHHHHHHHHHhc-ccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccce----ehhhhhhhhhhhhhh
Q 037942           83 ATGNQVLYFVGLE-NSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKV----FGTIICVGGAMVLSF  151 (369)
Q Consensus        83 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~l~~~  151 (369)
                       .+.+.+|+.+.+ +.+++.++++.+..|+...+++++++||+.++++      +    +|.++.+.|+.++..
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILGI  288 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHhc
Confidence             899999999999 9999999999999999999999999999999999      9    999999999988763

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.58  E-value=6.3e-07  Score=69.31  Aligned_cols=69  Identities=19%  Similarity=0.213  Sum_probs=63.0

Q ss_pred             HHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           76 FLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        76 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      ...+++++.+++.++..+++..|.+.+..+.++.++++.+++++++|||++.++      ++|+.++++|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            334446668899999999999999999999889999999999999999999998      999999999999876

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.57  E-value=1.2e-06  Score=79.77  Aligned_cols=134  Identities=18%  Similarity=0.233  Sum_probs=107.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVA-YRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG   85 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (369)
                      ..|.++.++++++|+...+..|... . .++..... +.......+..+.  ...... .....+.+......|++....
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLF--FLSGFG-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHH--Hhcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999766 3 67777666 4443222222222  211121 345678899999999999668


Q ss_pred             HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942           86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      .+.+++.++++.+++.++++..+.|++..++++++++|+++..+      ++|+.+.+.|+.+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~~  287 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999      9999999999988874

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.54  E-value=7.8e-07  Score=68.81  Aligned_cols=67  Identities=19%  Similarity=0.220  Sum_probs=61.7

Q ss_pred             HHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942          257 SGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL  323 (369)
Q Consensus       257 ~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  323 (369)
                      .++++..++++++..++++.|.+.+.++.++.++.+.+++++++||++++.+++|.+++++|+.+..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3445677899999999999999999999999999999999999999999999999999999998764

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.41  E-value=2.9e-06  Score=78.18  Aligned_cols=141  Identities=11%  Similarity=0.034  Sum_probs=113.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCH--HHHHHHHHHHHhh
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITW--PILFQIFLCSVTG   82 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~   82 (369)
                      +..+|-++++++++++|.+.++-+...++ .+...+..+--+.+.++..+.+...+++.....+|  +....++..+++.
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l  243 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCL  243 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence            46889999999999999999999998886 89988888888888888888777777665554433  3333222223333


Q ss_pred             hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942           83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH  153 (369)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~  153 (369)
                       ...+.+.-..+++.++....+-..+..++.++++++++|+++++..      .+|.+++++|.++....+
T Consensus       244 -f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  244 -FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             -HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccC
Confidence             5556667788889999888888889999999999999999999998      999999999999887543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.41  E-value=3.6e-06  Score=66.77  Aligned_cols=119  Identities=15%  Similarity=0.178  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHH
Q 037942            8 MPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQ   87 (369)
Q Consensus         8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (369)
                      +++++.+++.++-+...++.|...++ .+........  ...+..     .  ..         -...+..|+..+.+++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~~--~~~~~~-----~--~~---------p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWDF--IAALLA-----F--GL---------ALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhHH--HHHHHH-----H--hc---------cHHHHHHHHHHHHHHH
Confidence            47888999999999999999998775 5433322111  000000     0  00         0125667888889999


Q ss_pred             HHHHHHhcccchhhHHhhhhhhHHHHHHHHHH--hhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942           88 VLYFVGLENSTPTIGCALTNILPAITFVLAVI--FRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus        88 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      .++..++++.|++.+..+.+..++++.+.++.  ++||+++..+      ++|+++.++|++++..
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhcc
Confidence            99999999999999999999999888888885  8999999998      9999999999999873

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.39  E-value=3.3e-06  Score=72.73  Aligned_cols=136  Identities=13%  Similarity=0.047  Sum_probs=115.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG   85 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (369)
                      ...|..+++.+..+|+.+-+..|..-.. .+...-+..-+.+++++.+|+........  -.++......+.++++..++
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence            4578999999999999999999987654 67777788899999999999876532221  24566777778899999999


Q ss_pred             HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      .+.+-..++++.|....+++.++.|.+.++.++++++|+++..|      |+++...+.+..=..
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~  281 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGST  281 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999      999988887766333

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.13  E-value=3.8e-05  Score=59.78  Aligned_cols=69  Identities=16%  Similarity=0.294  Sum_probs=59.4

Q ss_pred             HHHHhHHHHHHHHHHHhccCcceeeeh-hhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942          258 GIVCSALAFCLIVWSIQRKGPLYVSVF-SPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       258 gi~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  326 (369)
                      .+.+.+++++++..++++.+.+.+=.+ ..+..+.+.+++++++||++++.+++|+.++++|++......
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344567899999999999998877666 468899999999999999999999999999999999885544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.09  E-value=1.8e-06  Score=74.78  Aligned_cols=139  Identities=14%  Similarity=0.195  Sum_probs=101.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHH
Q 037942          181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIV  260 (369)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~  260 (369)
                      +....|..+...+ ..+...++..++...+  +|......+++.-.+...|..+......  +.......|.  +.=|+.
T Consensus        34 d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~L--iLRg~m  106 (346)
T KOG4510|consen   34 DKPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKWL--ILRGFM  106 (346)
T ss_pred             CCCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEEE--Eeehhh
Confidence            3667899888888 7778888888887766  5566666665555555555544332221  2222221222  122443


Q ss_pred             HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942          261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  327 (369)
                      + ..+..+.++++++.+-+.+..+...+|+++.++++.+++|+.+..+..|..+.+.|++++.+..-
T Consensus       107 G-~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  107 G-FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             h-hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            3 35677888999999999999999999999999999999999999999999999999999876543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.98  E-value=0.00018  Score=66.26  Aligned_cols=130  Identities=13%  Similarity=0.075  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHhhhhC-CC--chHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHH
Q 037942          196 SWAAWVIIQTKLSKKF-PA--PYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWS  272 (369)
Q Consensus       196 ~~a~~~v~~~~~~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a  272 (369)
                      ++..+.++++++.++. ..  +..+++.++....+...+.......+.  .+.   ..+......++ ...++..+.+.+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~-~~~~~~~~~~~a   84 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--SRK---IPLKKYAILSF-LFFLASVLSNAA   84 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--CCc---ChHHHHHHHHH-HHHHHHHHHHHH
Confidence            4445667777776542 23  678888888888877766655443111  111   12333334444 456788899999


Q ss_pred             HhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCCCC
Q 037942          273 IQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELK  331 (369)
Q Consensus       273 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~  331 (369)
                      +++.+.....+.....|+.++++++++++++.+..++.+.+++.+|+.+....+.++.+
T Consensus        85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            99999999999999999999999999999999999999999999999999887655443

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.90  E-value=5.8e-05  Score=58.02  Aligned_cols=68  Identities=22%  Similarity=0.436  Sum_probs=58.3

Q ss_pred             HHHhHHHHHHHHHHHhccCcceeeeh-hhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942          259 IVCSALAFCLIVWSIQRKGPLYVSVF-SPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  326 (369)
                      +++..++++++..++++.|.+.+=.+ ..+..+.+.+++++++||++++.+++|+.++++|++..+..+
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34567899999999999998776555 557888999999999999999999999999999999986544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.85  E-value=0.00018  Score=63.96  Aligned_cols=117  Identities=11%  Similarity=0.095  Sum_probs=89.5

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhH
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGAT   84 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (369)
                      +..+++..++++.+.+..+.++.|..   ++++....+-+.+--.+.-.++....+    ++...|...+-++.|++- .
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~----~~~~~k~~~~nil~G~~w-~  206 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSK----KPFFEKKSWKNILTGLIW-G  206 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhccc----ccccccchHHhhHHHHHH-H
Confidence            34679999999999999999998873   377877776655444444444433321    122334445556677776 8


Q ss_pred             HHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccc
Q 037942           85 GNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKT  129 (369)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~  129 (369)
                      ..+.+++.|.+....+.+-.+.++.+++..+.+.+++||+=++++
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke  251 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE  251 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence            999999999999999999999999999999999999999988876

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.84  E-value=0.0057  Score=55.80  Aligned_cols=301  Identities=12%  Similarity=0.132  Sum_probs=176.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH-Hhhhc----CCCCCCHHHHHHHHHHH
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAY-FIEWK----TRPKITWPILFQIFLCS   79 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~-~~~~~----~~~~~~~~~~~~~~~~g   79 (369)
                      .-..|+++..++.++-|..++-.|...+  .+-...=....+++.+++ |+.. +..-+    .....+........+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli~-P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLIV-PWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            3468999999999999999999997543  553333333444444433 3322 11111    11123456666777778


Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhcccc-ccccCCccceehhhhhhhhhhhhhhhcCccc
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVA-IKTKPGQAKVFGTIICVGGAMVLSFYHGKTF  157 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~-~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~  157 (369)
                      ++- .+....|-.+++|+..+..+-+ ..+.-++..++-.++.++--. ..+.-++.-++|++++++|+.+........+
T Consensus        81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            876 7888999999999999988544 777778877777776442100 0011134458999999999999885322111


Q ss_pred             cCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhh-------hhCCCchH----HHHHHHHHHH
Q 037942          158 GIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLS-------KKFPAPYT----CTTLMCLISS  226 (369)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~-------~~~~~~~~----~~~~~~~~~~  226 (369)
                                  ++  ...+.++.+..+|++.++++++.-+++++-...-.       +...+|+.    .....+..+.
T Consensus       160 ------------~~--~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf  225 (344)
T PF06379_consen  160 ------------KE--LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGF  225 (344)
T ss_pred             ------------hh--hccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHH
Confidence                        00  11122346778999999999999999888764321       11112222    1222233333


Q ss_pred             HHHHHHHHHhc---cccc---ccccc-h--hhHHHHHHHHHHHHhHHHHHHHHHHHhccCc----ceeeehhhHHHHHHH
Q 037942          227 IMCSVIGLIVE---RKRA---AWKLN-A--TIRLVSALYSGIVCSALAFCLIVWSIQRKGP----LYVSVFSPLLLVIVA  293 (369)
Q Consensus       227 i~~~~~~~~~~---~~~~---~~~~~-~--~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~----~~~s~~~~~~pv~~~  293 (369)
                      +.-+.+.+...   ++..   +.... +  .......+..|++- ..++++|-++-.+.+.    .--.+.+.+..+++-
T Consensus       226 ~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lW-y~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~sn  304 (344)
T PF06379_consen  226 ITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLW-YSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSN  304 (344)
T ss_pred             HHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHH
Confidence            33344433321   2221   11111 1  11233333334433 3566666666666653    345567788888888


Q ss_pred             HHHHHHhcCc------cchhhhHHHHHHHHHHhhheec
Q 037942          294 IVSWALFQEK------LFIGTAIGSVLIVTGLYAVLWG  325 (369)
Q Consensus       294 l~~~~~~~e~------~~~~~~~G~~li~~gv~l~~~~  325 (369)
                      +++. +++|-      .-..-+.|+++++.+++++-++
T Consensus       305 vwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  305 VWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            8885 56663      2345678999999988876543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.83  E-value=0.00045  Score=55.60  Aligned_cols=132  Identities=13%  Similarity=0.162  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942          186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA  265 (369)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~  265 (369)
                      ..++++.++.+-++...+.-++.++..+|+..+++.+..+.+.+..+..+.++.  .........|+..+ -|++ ....
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHH
Confidence            457889999999999999999988877789999999999999988877766553  22222222344433 2443 4456


Q ss_pred             HHHHHHHHhccCcceeeehhh-HHHHHHHHHHHH----HhcCccchhhhHHHHHHHHHHhh
Q 037942          266 FCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWA----LFQEKLFIGTAIGSVLIVTGLYA  321 (369)
Q Consensus       266 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~----~~~e~~~~~~~~G~~li~~gv~l  321 (369)
                      ..+....+++.+++....+.. -+.+.+.+++.+    .-++++++.+++|.+++++|+.+
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            667778889988877665544 466667778876    34567899999999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.74  E-value=0.00015  Score=66.39  Aligned_cols=121  Identities=20%  Similarity=0.211  Sum_probs=88.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCC-chHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHH
Q 037942          181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPA-PYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGI  259 (369)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi  259 (369)
                      .+...|..+++.++++.+....++|+-..+.+. .....                  .+....+.  ++ .|+.    |.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~------------------~~~~~~l~--~~-~W~~----G~   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG------------------SGGRSYLR--RP-LWWI----GL   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc------------------chhhHHHh--hH-HHHH----HH
Confidence            456789999999999999999999987655221 00000                  00000011  11 2332    22


Q ss_pred             HHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942          260 VCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  326 (369)
                      +...++..+...++...|++.++++..+..++..+++..+++|+++..++.|+++++.|..+.....
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            2334556667789999999999999999999999999999999999999999999999988776544

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.71  E-value=0.00068  Score=54.55  Aligned_cols=139  Identities=13%  Similarity=0.152  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhH
Q 037942          184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSA  263 (369)
Q Consensus       184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~  263 (369)
                      ....++++.++++-.+..-..-++.+..++|....++.+..+.+.+..+.++.+. .+.+.......|+..+. |+++ .
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~G-G~lG-a   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWIG-GLLG-A   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHHc-cchh-h
Confidence            4677889999999999999999988887788999999999999998888777433 22233223324554443 3332 2


Q ss_pred             HHHHHHHHHHhccCc-ceeeehhhHHHHHHHHHHHHHhc----CccchhhhHHHHHHHHHHhhheec
Q 037942          264 LAFCLIVWSIQRKGP-LYVSVFSPLLLVIVAIVSWALFQ----EKLFIGTAIGSVLIVTGLYAVLWG  325 (369)
Q Consensus       264 ~~~~~~~~a~~~~~~-~~~s~~~~~~pv~~~l~~~~~~~----e~~~~~~~~G~~li~~gv~l~~~~  325 (369)
                      +-.+.......+.++ ........-+.+.+.+++.+=+.    .+++...++|.+++++|+++....
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            222333344555554 44555666677777888776443    567999999999999996665443

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.66  E-value=0.00048  Score=52.72  Aligned_cols=64  Identities=13%  Similarity=0.132  Sum_probs=57.1

Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhh
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVL  149 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~  149 (369)
                      +.++..++.+...++++.|.+.+-.+ .....+.+.+++++++||++++.+      ++|+.+.+.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence            34447888999999999999999666 778889999999999999999998      99999999999876

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.60  E-value=0.0013  Score=50.37  Aligned_cols=64  Identities=17%  Similarity=0.291  Sum_probs=54.9

Q ss_pred             HHhHHHHHHHHHHHhccCccee-eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942          260 VCSALAFCLIVWSIQRKGPLYV-SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL  323 (369)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~  323 (369)
                      .+..+++++...++|+.|...+ ++...+..+.+.+.+++++||++++.+++|+.+++.|++..+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3457899999999999987654 555568888899999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.52  E-value=0.00041  Score=52.74  Aligned_cols=66  Identities=18%  Similarity=0.267  Sum_probs=56.3

Q ss_pred             HHHhHHHHHHHHHHHhccCccee-eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942          259 IVCSALAFCLIVWSIQRKGPLYV-SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                      +.+..+++++...++|+.|.+.+ ++...+..+.+.+.+++++||++++.+++|+.++++|++..+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            34557899999999999987654 5555688899999999999999999999999999999998754

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.52  E-value=0.0013  Score=52.90  Aligned_cols=130  Identities=8%  Similarity=0.041  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942           10 FLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV   88 (369)
Q Consensus        10 ~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (369)
                      .++.+++-.+-+....+.....+. .+ |...+++-+..+.+++..+....+++.....+...|+ ...-|+++ +..-.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHH-HHHHH
Confidence            456677777778877777666665 65 9999999999999999888888665433222222222 33366777 78888


Q ss_pred             HHHHHhcccchhhHHhhhhh-hHHHHHHHHHH----hhhccccccccCCccceehhhhhhhhhhh
Q 037942           89 LYFVGLENSTPTIGCALTNI-LPAITFVLAVI----FRQEYVAIKTKPGQAKVFGTIICVGGAMV  148 (369)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~~-~pi~~~ll~~l----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  148 (369)
                      +........+++.+..+.-+ +-+...++..+    ..|+++++.+      .+|+.+.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence            88899999999988877444 44556666665    3567777776      9999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.51  E-value=0.00038  Score=52.44  Aligned_cols=66  Identities=23%  Similarity=0.318  Sum_probs=56.8

Q ss_pred             HhHHHHHHHHHHHhccCcce-eeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942          261 CSALAFCLIVWSIQRKGPLY-VSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  326 (369)
                      +..++|++...++|+.|... .++..-+-.+.+.+.++++|+|+.+..+++|..++++|++..+..+
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            45688999999999988654 5667778888899999999999999999999999999999886543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.43  E-value=0.0003  Score=54.82  Aligned_cols=68  Identities=12%  Similarity=0.150  Sum_probs=60.6

Q ss_pred             HHHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942           78 CSVTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      ..+..+..++.++..++++.|.+.+-.+ ..+.-+.+.++++++++|+++..+      ++|+.+.++|++++-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            3455557899999999999999999877 578999999999999999999998      9999999999988864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.43  E-value=0.00036  Score=53.66  Aligned_cols=67  Identities=13%  Similarity=0.208  Sum_probs=59.9

Q ss_pred             HHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942           79 SVTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      .+.++.+++.++..++++.|.+.+-.+ ..+.-+.+.+++++++||++++.+      ++|+.+.++|++++-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            355557888899999999999999777 778899999999999999999998      9999999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.40  E-value=0.00038  Score=53.37  Aligned_cols=110  Identities=12%  Similarity=0.119  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHH
Q 037942           14 VTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVG   93 (369)
Q Consensus        14 l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   93 (369)
                      ++..++||.++++.|...+. .++..-.. |..-....     +           .+.|.+.+  .++..-.+...|+..
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~i--pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----L-----------LLNPKYII--PFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----H-----------HHhHHHHH--HHHHHHHHHHHHHHH
Confidence            45678999999999998874 55443331 31111111     0           11122222  222224566788999


Q ss_pred             hcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhh
Q 037942           94 LENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVL  149 (369)
Q Consensus        94 l~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~  149 (369)
                      +...+.+.+.++ .++.=++|++.++++.+|..+++.      ++|+.+.++|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence            999999999999 588888999999888877778777      99999999998764

Many members are annotated as potential transmembrane proteins.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.38  E-value=0.00038  Score=52.43  Aligned_cols=65  Identities=18%  Similarity=0.223  Sum_probs=58.2

Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      +.++.+++.+...|++++|.+.+-.+ ...-.+.+.+.++++++|+++..+      ++++.+.++|++.+-
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk  102 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence            44457888999999999999999655 888999999999999999999998      999999999998775

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.31  E-value=0.0017  Score=49.40  Aligned_cols=65  Identities=15%  Similarity=0.133  Sum_probs=58.2

Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      +.++..++.+...++++.|.+.+-.+ .....+.+.+++++++||++++.+      ++|+.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence            44457888999999999999999666 778999999999999999999998      999999999999874

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.29  E-value=0.0012  Score=58.62  Aligned_cols=77  Identities=17%  Similarity=0.183  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942          252 VSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       252 ~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  329 (369)
                      +.+..-++ ...+...+.+.++++.+|+...++..+..+++.++++++++.+.+..||++..+.++|+.+........
T Consensus        18 ~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   18 LKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            33333344 367888899999999999999999999999999999999999999999999999999999987766544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.25  E-value=0.0012  Score=60.52  Aligned_cols=143  Identities=11%  Similarity=0.140  Sum_probs=115.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHHHhhh---cCCCCCCHHHHHHHHHH
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALDS---GMKPLVLVAYRQMFATLATIPFAYFIEW---KTRPKITWPILFQIFLC   78 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~---g~~~~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~   78 (369)
                      +...|-++++++++++|...++.|.-.++   +++--.+..+--++..++++|..+....   .+..-++..+....++.
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            34789999999999999999999987653   3565555566666677777765554332   22223455566677888


Q ss_pred             HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942           79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH  153 (369)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~  153 (369)
                      ++++.+++.++|..|.-.+++-.+++-..++....++...++.+.++++..      ++|...+++|.+++...+
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheeccc
Confidence            999999999999999999999999999999999999999999999999998      999999999999887543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.24  E-value=0.0023  Score=56.69  Aligned_cols=191  Identities=12%  Similarity=0.070  Sum_probs=116.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942            9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV   88 (369)
Q Consensus         9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (369)
                      |+++.+++++++|.+++-.|.. +. -|++.+-++......+.-+++..+..   .+    +.+.+..+-|.+- +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p----~f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILG---FP----PFYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcC---CC----cceeHHHhhhhhh-hcCce
Confidence            5788999999999999999964 44 57777666666555555555444422   22    2234455555655 88889


Q ss_pred             HHHHHhcccchhhHHhhhhh-hHHHHHHHHHH-hhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC--c
Q 037942           89 LYFVGLENSTPTIGCALTNI-LPAITFVLAVI-FRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS--I  164 (369)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~~-~pi~~~ll~~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~--~  164 (369)
                      +-.-.++.+..+....+-++ +-+..-..+.+ +++++..... -.....+|++++++|..+...-+.++....++.  .
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            99999999999999998665 34444444443 3433222111 123458899999999888876544331110000  0


Q ss_pred             chhhh-----hcc---cccccC-----CCccchhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037942          165 HWKYA-----EKM---SEENSG-----NKSNLILGSIAIIASSISWAAWVIIQTKLSKK  210 (369)
Q Consensus       165 ~~~~~-----~~~---~~~~~~-----~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~  210 (369)
                      ....+     ++.   .++.+.     ...+...|..+++++++.|+...+=..+..++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence            00011     011   001111     11257789999999999999988877777655

The region concerned is approximately 280 residues long.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.18  E-value=0.00068  Score=61.99  Aligned_cols=137  Identities=17%  Similarity=0.224  Sum_probs=111.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHH-HHHHHhhhcCC---C--CCCHHHHHHHH
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALD---SGMKPLVLVAYRQMFATLATI-PFAYFIEWKTR---P--KITWPILFQIF   76 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~---~g~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~--~~~~~~~~~~~   76 (369)
                      ...|...++.+.+..+...++.|....   ..++++.......-++.++++ |+....+....   .  ..+.. ....+
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            568999999999999999999999883   248899999998889988888 88776554332   1  12333 33334


Q ss_pred             HHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           77 LCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      +.+++. .+.|..-|..+.++++-.-++....--+++.+.++++++++++..+      .+|..++++|+.+-.
T Consensus       240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHH
Confidence            444665 6777888999999999999999999999999999999999999999      999999999999765

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.13  E-value=0.0033  Score=46.89  Aligned_cols=56  Identities=23%  Similarity=0.283  Sum_probs=34.9

Q ss_pred             HHhHHHHHHHHHHHhccCcceeee-hhhHHHHHHHHHHHHHhcCccchhhhHHHHHH
Q 037942          260 VCSALAFCLIVWSIQRKGPLYVSV-FSPLLLVIVAIVSWALFQEKLFIGTAIGSVLI  315 (369)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~s~-~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li  315 (369)
                      .+..++++++..++++.+.+.+=. ...+..+.+.+.+.+++||++|+.+++|+.+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            356789999999999999888855 45699999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.03  E-value=0.0016  Score=57.67  Aligned_cols=132  Identities=18%  Similarity=0.084  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942          186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA  265 (369)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~  265 (369)
                      |.+.++.|+++++...+=.|+....  |++....+++....+......+..+.+  .+.  +    +.++. |. .-+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f~--p----~amlg-G~-lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PFY--P----WAMLG-GA-LWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cce--e----HHHhh-hh-hhhcC
Confidence            5678899999999999988887533  777777777776666665555543321  111  1    11111 11 12344


Q ss_pred             HHHHHHHHhccCcceeeehhh-HHHHHHHHHHHH-HhcCcc-----chhhhHHHHHHHHHHhhheecCCCC
Q 037942          266 FCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWA-LFQEKL-----FIGTAIGSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       266 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~-~~~e~~-----~~~~~~G~~li~~gv~l~~~~~~~~  329 (369)
                      ..+-.-.++..+-...-.+-. .+.+.+...+.+ +||+++     ++..++|.+++++|..++..-|.+.
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            445555666666555444433 366777776655 555443     5689999999999999887766554

The region concerned is approximately 280 residues long.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.93  E-value=0.014  Score=52.13  Aligned_cols=140  Identities=16%  Similarity=0.176  Sum_probs=112.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----CCCHHHHHHHHHH
Q 037942            5 DDLMPFLAMVTVQLGYAGMNFTSKLALD-SGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-----KITWPILFQIFLC   78 (369)
Q Consensus         5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~-~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~   78 (369)
                      +...|++++....++=|+.+..-....+ .++++.++++.-.+..++.-....... ...++     +.++.-++-+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHHH
Confidence            4578999999999999998888776655 368899999988888888777664332 22222     2355667778888


Q ss_pred             HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942           79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY  152 (369)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  152 (369)
                      +.++ +.++.+.+.-++.-++-.-+.+..+--++..+++.+.++.+++..|      |+|+++.+.|+.+=.+.
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEILL  314 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHHH
Confidence            8888 8888888888988888888888889999999999999999999999      99999999999876643

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.63  E-value=0.012  Score=43.81  Aligned_cols=56  Identities=16%  Similarity=0.158  Sum_probs=34.5

Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhh
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTII  141 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l  141 (369)
                      +..+..+..++..++++.|.+.+-.+ ..+..+.+.+.+.+++||+++..+      ++|+.+
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l   92 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence            43557888999999999999999666 679999999999999999999998      888765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.51  E-value=0.085  Score=49.07  Aligned_cols=145  Identities=12%  Similarity=0.089  Sum_probs=92.2

Q ss_pred             chHHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHH-HHHHHHhhhcCCC-------CC
Q 037942            6 DLMPFLAMVTVQLGYAGMN-------FTSKLALDSGMKPLVLVAYRQM---FATLAT-IPFAYFIEWKTRP-------KI   67 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~-------~~~k~~~~~g~~~~~~~~~r~~---~~~l~l-~~~~~~~~~~~~~-------~~   67 (369)
                      ..||++.++++.+..+...       +..+.....|.++.....-.++   ++..+. .+++.++.+++++       ..
T Consensus       172 ~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~  251 (345)
T PRK13499        172 LKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSL  251 (345)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccc
Confidence            4789999999999999988       6666544456776665555554   443333 3333332222111       11


Q ss_pred             C----HHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHh---hh-hhhHHHHHHHHHHhhhccccccccCCccceehh
Q 037942           68 T----WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCA---LT-NILPAITFVLAVIFRQEYVAIKTKPGQAKVFGT  139 (369)
Q Consensus        68 ~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~  139 (369)
                      +    .+......+.|++- ...+.+|..+-...+.+...+   +. ++..++..+.+. ++||+=+..+++.+.-++|+
T Consensus       252 ~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~  329 (345)
T PRK13499        252 AKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGC  329 (345)
T ss_pred             cchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHH
Confidence            2    23333345566665 777888888888876655544   55 666688888887 59998773333345557888


Q ss_pred             hhhhhhhhhhhhh
Q 037942          140 IICVGGAMVLSFY  152 (369)
Q Consensus       140 ~l~~~Gv~l~~~~  152 (369)
                      ++.++|..++.+.
T Consensus       330 vliI~g~~lig~~  342 (345)
T PRK13499        330 VVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHhhc
Confidence            8888888888753

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.36  E-value=0.0029  Score=54.73  Aligned_cols=134  Identities=19%  Similarity=0.223  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942          186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA  265 (369)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~  265 (369)
                      ..+.+++=++.|+..-....|...   .|.+.+.-+.+.+.++.+.+.++..+ .  .   ....+..-+..|.+-+ ++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p-~--~---T~~~~iv~~isG~~Ws-~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSP-E--L---TLTIFIVGFISGAFWS-FG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecC-c--c---chhhHHHHHHhhhHhh-hh
Confidence            567888999999988887766543   45666666666666665555554222 1  1   1123454555566554 78


Q ss_pred             HHHHHHHHhccCcceeeehhh-HHHHHHHHHHHHHhcCccchhhhH----HHHHHHHHHhhheecCCCC
Q 037942          266 FCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWALFQEKLFIGTAI----GSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       266 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~~~~~~~~----G~~li~~gv~l~~~~~~~~  329 (369)
                      +....+++++.+.+++.+++. .+.+-+.+++++.|+|-.+..+++    +.++++.|+++..+.++.+
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n  141 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN  141 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc
Confidence            888999999999999998865 677788899999999999876543    5677888888877766543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.32  E-value=0.27  Score=45.26  Aligned_cols=142  Identities=19%  Similarity=0.139  Sum_probs=94.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhCC---CchHHHHHHHHHHHHHHHHHHHHhccc--------ccccccchhhHHHH
Q 037942          185 LGSIAIIASSISWAAWVIIQTKLSKKFP---APYTCTTLMCLISSIMCSVIGLIVERK--------RAAWKLNATIRLVS  253 (369)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~  253 (369)
                      .=.+..+...+-++......|+..++..   .|.+..+..-+.-.+++....+..++.        ...+....+.....
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3344445555556666666666554321   346666666666666666665544211        01111111112222


Q ss_pred             HHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942          254 ALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       254 l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  327 (369)
                      +..-+. ...+.+.+++.++.+.++++..+...+..+.+.++.+++++++.+..||...++...|+.+......
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            222222 3567777889999999999999999999999999999999999999999999999999999974433

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.28  E-value=0.016  Score=44.43  Aligned_cols=109  Identities=17%  Similarity=0.184  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHH
Q 037942          192 ASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVW  271 (369)
Q Consensus       192 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~  271 (369)
                      +.+++|++.+-+.|+-.+...+.-.- . + ...-...    ++.             .|-..+  ....+..+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~-~~~~~~~----Ll~-------------n~~y~i--pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-Q-LLQEIKF----LLL-------------NPKYII--PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-H-HHHHHHH----HHH-------------hHHHHH--HHHHHHHHHHHHHH
Confidence            45788999999999988764422211 1 1 1111111    100             111111  22234566678888


Q ss_pred             HHhccCcceeeehh-hHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942          272 SIQRKGPLYVSVFS-PLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV  322 (369)
Q Consensus       272 a~~~~~~~~~s~~~-~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~  322 (369)
                      .+.+.+-+.+.++. .+.-+++.+.++++.+|..+...++|+.+++.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999999995 8999999999988777778889999999999998754

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=96.03  E-value=0.024  Score=49.62  Aligned_cols=59  Identities=10%  Similarity=0.073  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhh
Q 037942           84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMV  148 (369)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  148 (369)
                      +....+....+++.++...+....+.++++.+++.++++|+++..+      ++|+.+.+.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence            6666778899999999999999999999999999999999999999      9999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.73  E-value=0.16  Score=41.00  Aligned_cols=137  Identities=7%  Similarity=-0.020  Sum_probs=84.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN   86 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (369)
                      ...+++.+++-.+-.....+.-...+..=+|....+.-+..+.+++..+.+..+++.......+.-++.+.-|+++ +..
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence            4566777777777777777776655542359999999999999998888877433322221122223334445555 555


Q ss_pred             HHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhh----ccccccccCCccceehhhhhhhhhhhhh
Q 037942           87 QVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQ----EYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        87 ~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~----e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      -...........++....+ ..-+-+...++..+=..    .+++..      |++|+++.++|+.++.
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~~  145 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHhc
Confidence            5555555566655555444 45555556666554322    444444      5999999999955543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.62  E-value=0.0062  Score=54.88  Aligned_cols=126  Identities=24%  Similarity=0.202  Sum_probs=92.6

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHH
Q 037942          180 KSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGI  259 (369)
Q Consensus       180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi  259 (369)
                      ..++..|..+++.+.+..+....+.|+-.++...    ..-+             ..+.......  .+ .||.    |+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~r-------------a~~gg~~yl~--~~-~Ww~----G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLR-------------AGEGGYGYLK--EP-LWWA----GM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hccc-------------ccCCCcchhh--hH-HHHH----HH
Confidence            4567789999999999999999999887665211    0000             0011111111  12 3333    44


Q ss_pred             HHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942          260 VCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  329 (369)
                      +...++-...+.+....|++.+++++.++.+++.+++..+++|++++.-.+|+.+.++|-..+.....++
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            5556677777778888999999999999999999999999999999999999999999988776655443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.74  E-value=0.022  Score=47.66  Aligned_cols=65  Identities=11%  Similarity=0.178  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942          264 LAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK  328 (369)
Q Consensus       264 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~  328 (369)
                      .+.+.|..+++..+++.++.+..-+-.+..+++++++|+++...+++..++.+.|+++..+.++.
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~  129 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE  129 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence            46678999999999999999999999999999999999999999999999999999998876654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.21  E-value=1  Score=40.89  Aligned_cols=135  Identities=12%  Similarity=0.068  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCchH--HHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhH
Q 037942          186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYT--CTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSA  263 (369)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~  263 (369)
                      ....++.-+++-.+..+..|.....++-|..  ....+.+.+.+.....-...--+.++.+......|..+-.+    ..
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~l----f~   88 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLL----FV   88 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHH----HH
Confidence            3444444445555555666766666553344  44488888877766555432223333333222233332221    11


Q ss_pred             HHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942          264 LAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       264 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~  324 (369)
                      ...+.-.+++++.+.....++....|+++.+....+++..++...+.....+++|......
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence            2333444789999999999999999999999999999999999999999999999876654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.29  E-value=0.38  Score=41.64  Aligned_cols=137  Identities=12%  Similarity=0.060  Sum_probs=95.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----CCCHHHHHHHHHHHH
Q 037942            7 LMPFLAMVTVQLGYAGMNFTSKLALDS-GMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-----KITWPILFQIFLCSV   80 (369)
Q Consensus         7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~   80 (369)
                      ..|-++++++..+-|.....-.....+ .-+..++++.-.+-+.+.+..-.++.. ..+.     ......|.-+...++
T Consensus       171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTG-ElweF~yF~~RhP~~~~~l~l~ai  249 (337)
T KOG1580|consen  171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTG-ELWEFFYFVQRHPYVFWDLTLLAI  249 (337)
T ss_pred             chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehh-hHHHHHHHHHhccHHHHHHHHHHH
Confidence            467788888888888877765433221 123334444444444443332221110 0000     012345666777888


Q ss_pred             hhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942           81 TGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      ++ ++++++.+.-..+-+|-.-+++..+--+|+.++++++++.+++.+|      |+|.++.+.|...=..
T Consensus       250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADVV  313 (337)
T ss_pred             HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHhh
Confidence            88 8999999999999999999999999999999999999999999999      9999999999887664

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.06  E-value=0.34  Score=42.94  Aligned_cols=144  Identities=17%  Similarity=0.090  Sum_probs=100.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhh----cCCCC-CCHHHHHHHHHHH
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALDS-GMKPLVLVAYRQMFATLATIPFAYFIEW----KTRPK-ITWPILFQIFLCS   79 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~-~~~~~~~~~~~~g   79 (369)
                      ...|.++.+++.+.-+.+.+..|..... |=..+.++++..+.+.++++|.....+.    ...++ +..+.|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            4579999999999999999999976553 2237888999999999999998776431    11122 3567777778888


Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCcc
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKT  156 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~  156 (369)
                      ++++.+++.. .+=++-++|-.-.+-..--...=.++++.+++|..+...      |-+-++.+.|-..-..-++.+
T Consensus       263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~~e  332 (347)
T KOG1442|consen  263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKEHE  332 (347)
T ss_pred             HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHHHH
Confidence            8885554422 233344554443333333444556788889999998887      999999999988877654433

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=92.19  E-value=0.44  Score=35.61  Aligned_cols=116  Identities=17%  Similarity=0.190  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCChHHH--HHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942           11 LAMVTVQLGYAGMNFTSKLALDSGMKPLVL--VAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV   88 (369)
Q Consensus        11 ~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~--~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (369)
                      .-++...++||..+.+.|.... |.+..--  ..+|.+           .++.+.. -.+++++...+    ++.+ ...
T Consensus         6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~-----------lqe~~tl-~l~w~Y~iPFl----lNqc-gSa   67 (125)
T KOG4831|consen    6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIA-----------LQEMKTL-FLNWEYLIPFL----LNQC-GSA   67 (125)
T ss_pred             HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHH-----------HHHHHHH-HHhHHHHHHHH----HHHh-hHH
Confidence            3467788999999999998765 2321110  111111           1111111 12333333322    2212 236


Q ss_pred             HHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942           89 LYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS  150 (369)
Q Consensus        89 ~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  150 (369)
                      +||.-+++.+.+.+..+ .++.-.|+.+.+..+ +|+...+.     -++|..+..+|+.+.+
T Consensus        68 ly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence            77899999999999888 566777888888775 55544332     2899999999987654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=91.86  E-value=0.59  Score=40.15  Aligned_cols=137  Identities=12%  Similarity=0.168  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCHHHHHHHHHHHHhhh
Q 037942            9 PFLAMVTVQLGYAGMNFTSKLALD-SGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP----KITWPILFQIFLCSVTGA   83 (369)
Q Consensus         9 g~~~~l~~~~~~g~~~~~~k~~~~-~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~   83 (369)
                      |++.+...++.-+..-...|.-.+ ++..-+..+++.-+++..+++.+-+..+.+...    ..+.....+.++.|++. 
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-  234 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-  234 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence            444444444444444444554433 246688889999999999998887776533221    23334455677778877 


Q ss_pred             HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942           84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY  152 (369)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  152 (369)
                      ++-.++--+..+-++...-+++..+.-.-..+-+.++++|+.+...      ..++++++....+-.+.
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYava  297 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAVA  297 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHHH
Confidence            6666788899999999999999999999999999999999999987      99999988877766643

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=91.68  E-value=2.1  Score=38.76  Aligned_cols=123  Identities=16%  Similarity=0.167  Sum_probs=83.4

Q ss_pred             HHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccc--cccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCccee
Q 037942          204 QTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAA--WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYV  281 (369)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~  281 (369)
                      .+...++++-|+..+..+..+-.......-...+...+.  -...+....--+.-.|+ +++.-..+.++++++++.+..
T Consensus        35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence            344444555567777766665544443333333221111  01111112222233344 567888899999999999999


Q ss_pred             eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942          282 SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       282 s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  327 (369)
                      ++.-...+++..+++.++-=|++++....=..+|-+|+.+..+.+.
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT  159 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST  159 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence            9999999999999999999999999998888899999998887653

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.66  E-value=1.3  Score=40.83  Aligned_cols=145  Identities=12%  Similarity=0.012  Sum_probs=88.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHh--ccccc-ccccchhhHHHHHHHH
Q 037942          181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIV--ERKRA-AWKLNATIRLVSALYS  257 (369)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~-~~~~~~~~~~~~l~~~  257 (369)
                      .+-..|+++..++++|.+.+.+-.||..+-  + ++.......+-+-+..|.....  .++.. .....+...+......
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKVKGW--S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhcCCc--c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            345789999999999999999999997532  2 4433333333333334433322  22221 1222222244444555


Q ss_pred             HHHHhHHHHHHHHHHHhccCcce-eeehhhHHHHHHHHHHHHHhcC-------ccchhhhHHHHHHHHHHhhheecCCCC
Q 037942          258 GIVCSALAFCLIVWSIQRKGPLY-VSVFSPLLLVIVAIVSWALFQE-------KLFIGTAIGSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       258 gi~~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~l~~~~~~~e-------~~~~~~~~G~~li~~gv~l~~~~~~~~  329 (369)
                      |++- .++-..|-.+++|++.+. .++..-+..++..++--++.++       +-....++|.++.++|+.+..+...++
T Consensus        80 G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   80 GVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             HHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence            6654 467778888999988654 3445556666666665555432       223467889999999999887665443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=89.48  E-value=0.19  Score=45.20  Aligned_cols=131  Identities=13%  Similarity=0.077  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHh-cc----------cccccccchhhHHHHHHHHHH
Q 037942          191 IASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIV-ER----------KRAAWKLNATIRLVSALYSGI  259 (369)
Q Consensus       191 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~----------~~~~~~~~~~~~~~~l~~~gi  259 (369)
                      +++.+||+-+-..+|-..++..- .+..+|-+.++.++..++..+. +.          ...+....++..+...+.-|+
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv   80 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV   80 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence            56788999999988887665322 2234444444444333322211 11          112222333334444444454


Q ss_pred             HHhHHHHHHHHHHHhccCcceeeehhh-HHHHHHHHHHHHHhcCccc--hhhhHHHHHHHHHHhhhee
Q 037942          260 VCSALAFCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWALFQEKLF--IGTAIGSVLIVTGLYAVLW  324 (369)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~~~--~~~~~G~~li~~gv~l~~~  324 (369)
                      + --++..+..+++...+.+..-++.. +..++++++.|+. +.+.+  ...+.|..++++++++-..
T Consensus        81 v-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~  146 (336)
T PF07168_consen   81 V-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAA  146 (336)
T ss_pred             h-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHH
Confidence            4 4578889999999888776665542 3334455555543 44433  3566788888888877643

Transport is dependent on glucose and a proton gradient [].

>PRK02237 hypothetical protein; Provisional

Probab=88.85  E-value=2.3  Score=32.11  Aligned_cols=47  Identities=9%  Similarity=0.186  Sum_probs=40.7

Q ss_pred             eeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942          281 VSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       281 ~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  327 (369)
                      .+.+.-.-.+.++++.+.+-|++|+...++|.++.++|+.++.+..|
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            45667777888999999999999999999999999999988876554

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=87.13  E-value=1.1  Score=33.73  Aligned_cols=46  Identities=13%  Similarity=0.270  Sum_probs=39.4

Q ss_pred             eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942          282 SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD  327 (369)
Q Consensus       282 s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~  327 (369)
                      +.+.-.-.+.++++++.+-+++|+...++|..+.++|+.++.+..|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            4455666778899999999999999999999999999998877654

; GO: 0016020 membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=86.48  E-value=4.1  Score=36.31  Aligned_cols=140  Identities=14%  Similarity=0.092  Sum_probs=95.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC------CCCHHHHHHHHHH
Q 037942            6 DLMPFLAMVTVQLGYAGMNFTSKLALD-SGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP------KITWPILFQIFLC   78 (369)
Q Consensus         6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~-~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~------~~~~~~~~~~~~~   78 (369)
                      +..|+.+.-.+.++-+...-+-....+ ++-+...++++-+.++.++++........ ..+      .-+++.+...++.
T Consensus       188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~  266 (367)
T KOG1582|consen  188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLF  266 (367)
T ss_pred             ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHH
Confidence            345665555555555555444433333 34567888888888888888776655321 111      2356677777777


Q ss_pred             HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942           79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH  153 (369)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~  153 (369)
                      +..+ .++...-..=++.-++..++.+...--.++.+++++++.++++.+.      .-+.++.+.|+++=.+++
T Consensus       267 s~~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  267 SLAG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence            7766 3443333333444667777777888888999999999999999998      888889999999888765

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=85.88  E-value=1.4  Score=39.24  Aligned_cols=65  Identities=12%  Similarity=0.168  Sum_probs=56.6

Q ss_pred             HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheec
Q 037942          261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWG  325 (369)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~  325 (369)
                      +-..+-.+.+.++..++++...++.-...+++.+++..+++..++..+|.|+..+.+|...+...
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            34455566677888899999999999999999999999999999999999999999998887654

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=85.82  E-value=0.84  Score=41.18  Aligned_cols=129  Identities=12%  Similarity=0.112  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc------CCC-------CCCHHHHHHHHHHH
Q 037942           13 MVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK------TRP-------KITWPILFQIFLCS   79 (369)
Q Consensus        13 ~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~------~~~-------~~~~~~~~~~~~~g   79 (369)
                      |+++.+|||..+...|++..+ -...+...+-+.++.++..++.-+.-..      ..+       +-++......+.-|
T Consensus         1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG   79 (336)
T PF07168_consen    1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG   79 (336)
T ss_pred             CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence            457889999999999988765 3333457777777766655544332111      111       22455555555566


Q ss_pred             HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhh
Q 037942           80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMV  148 (369)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  148 (369)
                      ++. .+++.+..+|+.+...+.+-++ ..+.-+...++.++. ..|.++..    .-..|+.+.++.+++
T Consensus        80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~----iLF~GV~cf~iAI~l  143 (336)
T PF07168_consen   80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAE----ILFPGVACFLIAIIL  143 (336)
T ss_pred             Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCce----EEEccHHHHHHHHHH
Confidence            665 8889999999999998888777 444445555555554 45544321    003355555554444

Transport is dependent on glucose and a proton gradient [].

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=81.55  E-value=0.41  Score=42.02  Aligned_cols=142  Identities=15%  Similarity=0.192  Sum_probs=98.7

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhhhh-CCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHH
Q 037942          180 KSNLILGSIAIIASSISWAAWVIIQTKLSKK-FPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSG  258 (369)
Q Consensus       180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  258 (369)
                      ..+.+.|..++=.=.+|-......+..+.++ ...|...++..+..-+++-.++..+..+.   ...    -|-.-+.++
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~---~~~----~~~hYilla   85 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY---IKA----KWRHYILLA   85 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH---HHH----HHHHhhhee
Confidence            3455566655554455555555555555544 34677888887777777777777754321   111    233333444


Q ss_pred             HHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942          259 IVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE  329 (369)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~  329 (369)
                      .+ -+=+.++...|.++++.+.+..+-.-..+...+++|++++.+-.+.++.|.++.++|+.+....+-..
T Consensus        86 ~~-DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a  155 (336)
T KOG2766|consen   86 FV-DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA  155 (336)
T ss_pred             EE-eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence            43 44566677788899998888888888888889999999999999999999999999999987766543

>PRK02237 hypothetical protein; Provisional

Probab=80.97  E-value=10  Score=28.77  Aligned_cols=40  Identities=15%  Similarity=0.197  Sum_probs=34.5

Q ss_pred             hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942          106 TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus       106 ~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      -....+...+..+++-++|+++.+      ++|..+|++|+.++.+
T Consensus        66 GGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         66 GGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY  105 (109)
T ss_pred             hhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence            455666677889999999999999      9999999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	369
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 23/164 (14%), Positives = 42/164 (25%), Gaps = 57/164 (34%)

Query: 221 MCLISSIMCSVIGLIVERKRAAW---------KLNATIRL-VSALYSGIVCSALAFCLIV 270
           +   +    S+I   +    A W         KL   I   ++ L               
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP------------- 368

Query: 271 WSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKEL 330
            +  RK  ++        L +        F           S  I T L +++W    + 
Sbjct: 369 -AEYRK--MFDR------LSV--------FPP---------SAHIPTILLSLIWFDVIKS 402

Query: 331 KPDNVIVEPE----LTKDAESGDIG----QQQLFCTRSNGNIHH 366
               V+ +      + K  +   I       +L     N    H
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	369
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.04
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.68
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.63
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.59

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.04  E-value=2.1e-10  Score=90.76  Aligned_cols=70  Identities=21%  Similarity=0.416  Sum_probs=53.7

Q ss_pred             HHHHHhHHHHHHHHHHHhccCcceeeeh-hhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942          257 SGIVCSALAFCLIVWSIQRKGPLYVSVF-SPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       257 ~gi~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  326 (369)
                      +++++++++++++.+++++.+++.+.++ ..+.|+++.+++++++||++++.+++|++++++|+++....+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4667788999999999999999999999 899999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.68  E-value=5.1e-08  Score=74.33  Aligned_cols=70  Identities=21%  Similarity=0.416  Sum_probs=64.1

Q ss_pred             HHHHHhHHHHHHHHHHHhccCcceeeeh-hhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942          257 SGIVCSALAFCLIVWSIQRKGPLYVSVF-SPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK  326 (369)
Q Consensus       257 ~gi~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~  326 (369)
                      .++++..++++++.+++++.+.+.+.++ ..+.|+++.+++++++||++++.+++|..+++.|+++....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4556778999999999999999999888 799999999999999999999999999999999999886543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.63  E-value=4.6e-08  Score=77.29  Aligned_cols=70  Identities=11%  Similarity=0.197  Sum_probs=53.8

Q ss_pred             HHHHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942           77 LCSVTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY  152 (369)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  152 (369)
                      +.+++.+++++.++..++++.|++.+..+ .++.|+++.++++++++|++++.+      ++|++++++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhcC
Confidence            45666678999999999999999999999 899999999999999999999999      99999999999999753

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.59  E-value=2.8e-07  Score=70.16  Aligned_cols=69  Identities=12%  Similarity=0.199  Sum_probs=63.5

Q ss_pred             HHHHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942           77 LCSVTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF  151 (369)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  151 (369)
                      +.+.+.+.+++.++..++++.|.+.+..+ ..+.|+++.+++++++||++++.+      ++|+.+.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            45566668899999999999999999998 899999999999999999999998      9999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00