Citrus Sinensis ID: 037992


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
SENAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP
cccccccEEEEEcccccccccEEEEcccccccccccccccccccccccccEEEccccccccccccHHHHccccccccccccccccccccccHHHHHHHHcccccccccccccccEEEcccccEEEEEcc
ccccccEEEEEEccccEcccEEEEEcccccccccccccEccccHHccHHcEEccccccEEEEEccHHHHHccccccccccccccccccccHHHHHHHHHccccEcccccHHHHcEEEEccccEEEEEcc
senagqdfydvslvdgfnlplslapqgggsgncsstscpqnvnavcplelavkgsdgssVIACKSAclalnqpqycctgdfgtpdkcpptdyskifktqcpqaysyayddksstftctgrpnyaitfcp
SENAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYayddksstftctgrpnyaitfcp
SENAGQDFYDVSLVDGFNLPLSLAPQgggsgncsstscPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP
*******FYDVSLVDGFNLPLSL**************CPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFC*
****GQD*YDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP
SENAGQDFYDVSLVDGFNLPLSLAP***********SCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP
****GQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SENAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query129 2.2.26 [Sep-21-2011]
O80327244 Thaumatin-like protein 1 N/A no 0.984 0.520 0.790 2e-53
P83332246 Thaumatin-like protein 1 N/A no 0.984 0.516 0.736 3e-49
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.984 0.522 0.705 6e-47
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.984 0.516 0.682 6e-45
P83336212 Thaumatin-like protein 1b N/A no 0.968 0.589 0.685 1e-44
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.953 0.502 0.704 3e-44
P83335242 Thaumatin-like protein 2 N/A no 0.961 0.512 0.650 3e-40
P50699243 Thaumatin-like protein OS no no 0.937 0.497 0.593 5e-36
P28493239 Pathogenesis-related prot no no 0.953 0.514 0.590 3e-35
P81295225 Pathogenesis-related prot N/A no 0.860 0.493 0.508 1e-26
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function desciption
 Score =  207 bits (527), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/129 (79%), Positives = 112/129 (86%), Gaps = 2/129 (1%)

Query: 1   SENAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSV 60
           + N GQDFYDVSLVDGFNLP+ LAP+GG SG+C+STSC  N+N VCP EL+ KGSDGS V
Sbjct: 118 ATNGGQDFYDVSLVDGFNLPIKLAPRGG-SGDCNSTSCAANINTVCPAELSDKGSDGS-V 175

Query: 61  IACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGR 120
           I CKSACLALNQPQYCCTG +GTPD CPPTD+SK+FK QCPQAYSYAYDDKSSTFTC G 
Sbjct: 176 IGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGG 235

Query: 121 PNYAITFCP 129
           PNY ITFCP
Sbjct: 236 PNYEITFCP 244





Pyrus pyrifolia (taxid: 3767)
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function description
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|P81295|PRR3_JUNAS Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query129
25091401 244 RecName: Full=Thaumatin-like protein 1; 0.984 0.520 0.790 1e-51
32140539 244 thaumatin/PR5-like protein [Pyrus pyrifo 0.984 0.520 0.790 1e-51
190613907 246 putative allergen Pru p 2.01A [Prunus du 0.984 0.516 0.775 7e-51
359744030 246 thaumatin-like protein 2 [Prunus persica 0.984 0.516 0.767 6e-50
225441133 242 PREDICTED: thaumatin-like protein 1 [Vit 0.968 0.516 0.763 9e-49
190613911 246 putative allergen Pru p 2.01B [Prunus du 0.984 0.516 0.744 2e-48
255556826 242 Zeamatin precursor, putative [Ricinus co 0.961 0.512 0.763 3e-48
190613909 246 putative allergen Pru du 2.01B [Prunus d 0.984 0.516 0.744 4e-48
190613905 246 putative allergen Pru du 2.01A [Prunus d 0.984 0.516 0.744 4e-48
25091405 246 RecName: Full=Thaumatin-like protein 1; 0.984 0.516 0.736 2e-47
>gi|25091401|sp|O80327.1|TLP1_PYRPY RecName: Full=Thaumatin-like protein 1; Flags: Precursor gi|3241854|dbj|BAA28872.1| thaumatin-like protein precursor [Pyrus pyrifolia] Back     alignment and taxonomy information
 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/129 (79%), Positives = 112/129 (86%), Gaps = 2/129 (1%)

Query: 1   SENAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSV 60
           + N GQDFYDVSLVDGFNLP+ LAP+GG SG+C+STSC  N+N VCP EL+ KGSDGS V
Sbjct: 118 ATNGGQDFYDVSLVDGFNLPIKLAPRGG-SGDCNSTSCAANINTVCPAELSDKGSDGS-V 175

Query: 61  IACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGR 120
           I CKSACLALNQPQYCCTG +GTPD CPPTD+SK+FK QCPQAYSYAYDDKSSTFTC G 
Sbjct: 176 IGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGG 235

Query: 121 PNYAITFCP 129
           PNY ITFCP
Sbjct: 236 PNYEITFCP 244




Source: Pyrus pyrifolia

Species: Pyrus pyrifolia

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32140539|dbj|BAC78212.1| thaumatin/PR5-like protein [Pyrus pyrifolia] Back     alignment and taxonomy information
>gi|190613907|gb|ACE80957.1| putative allergen Pru p 2.01A [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information
>gi|359744030|gb|AEV57471.1| thaumatin-like protein 2 [Prunus persica] Back     alignment and taxonomy information
>gi|225441133|ref|XP_002265852.1| PREDICTED: thaumatin-like protein 1 [Vitis vinifera] gi|297739994|emb|CBI30176.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|190613911|gb|ACE80959.1| putative allergen Pru p 2.01B [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information
>gi|255556826|ref|XP_002519446.1| Zeamatin precursor, putative [Ricinus communis] gi|223541309|gb|EEF42860.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|190613909|gb|ACE80958.1| putative allergen Pru du 2.01B [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information
>gi|190613905|gb|ACE80956.1| putative allergen Pru du 2.01A [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information
>gi|25091405|sp|P83332.1|TLP1_PRUPE RecName: Full=Thaumatin-like protein 1; AltName: Full=PpAZ44; Flags: Precursor gi|19879968|gb|AAM00216.1|AF362988_1 thaumatin-like protein [Prunus persica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query129
UNIPROTKB|O80327244 TL1 "Thaumatin-like protein 1" 0.968 0.512 0.732 6.7e-49
UNIPROTKB|P83332246 P83332 "Thaumatin-like protein 0.984 0.516 0.697 2.3e-46
UNIPROTKB|Q9SMH2243 TL1 "Thaumatin-like protein 1" 0.968 0.514 0.661 2.5e-42
UNIPROTKB|Q9FSG7246 TL1 "Thaumatin-like protein 1a 0.968 0.508 0.645 4e-42
UNIPROTKB|P83336212 P83336 "Thaumatin-like protein 0.968 0.589 0.637 6.6e-42
UNIPROTKB|P83335242 P83335 "Thaumatin-like protein 0.953 0.508 0.608 7e-38
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.984 0.401 0.550 8e-37
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.953 0.497 0.590 1.7e-36
TAIR|locus:2005549330 AT1G75800 "AT1G75800" [Arabido 0.968 0.378 0.551 1.9e-35
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.984 0.516 0.542 3.1e-35
UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] Back     alignment and assigned GO terms
 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 93/127 (73%), Positives = 100/127 (78%)

Query:     3 NAGQDFYDVSLVDGFNLPLSLAPQXXXXXXXXXXXXPQNVNAVCPLELAVKGSDGSSVIA 62
             N GQDFYDVSLVDGFNLP+ LAP+              N+N VCP EL+ KGSDGS VI 
Sbjct:   120 NGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNSTSCAA-NINTVCPAELSDKGSDGS-VIG 177

Query:    63 CKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPN 122
             CKSACLALNQPQYCCTG +GTPD CPPTD+SK+FK QCPQAYSYAYDDKSSTFTC G PN
Sbjct:   178 CKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPN 237

Query:   123 YAITFCP 129
             Y ITFCP
Sbjct:   238 YEITFCP 244




GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|P83332 P83332 "Thaumatin-like protein 1" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
UNIPROTKB|Q9SMH2 TL1 "Thaumatin-like protein 1" [Castanea sativa (taxid:21020)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FSG7 TL1 "Thaumatin-like protein 1a" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
UNIPROTKB|P83336 P83336 "Thaumatin-like protein 1b" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
UNIPROTKB|P83335 P83335 "Thaumatin-like protein 2" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00000591001
SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (246 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query129
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 4e-68
pfam00314212 pfam00314, Thaumatin, Thaumatin family 4e-58
smart00205218 smart00205, THN, Thaumatin family 3e-53
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 2e-22
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 1e-09
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 3e-09
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 9e-07
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 2e-05
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 2e-05
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  204 bits (520), Expect = 4e-68
 Identities = 81/126 (64%), Positives = 96/126 (76%), Gaps = 2/126 (1%)

Query: 3   NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIA 62
           + GQDFYDVSLVDG+NLP+S+ PQGG SG C +  C  ++NAVCP EL VK S G  V+A
Sbjct: 96  SGGQDFYDVSLVDGYNLPVSITPQGG-SGGCRTAGCVADLNAVCPAELQVKNSGGR-VVA 153

Query: 63  CKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPN 122
           CKSACLA N  +YCC G +GTP+ C PT YS++FK  CPQAYSYAYDD +STFTC+   N
Sbjct: 154 CKSACLAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGAN 213

Query: 123 YAITFC 128
           Y ITFC
Sbjct: 214 YVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 129
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 99.89
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 99.78
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 99.72
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=6e-53  Score=331.98  Aligned_cols=123  Identities=66%  Similarity=1.310  Sum_probs=117.2

Q ss_pred             CCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCCC
Q 037992            4 AGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGT   83 (129)
Q Consensus         4 ~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~~   83 (129)
                      +++|||||||||||||||.|+|.++ ...|+.++|.+|||+.||+||||++.+| .||||+|||++|++|||||||+|++
T Consensus        97 ~~~d~YdvSlVdGfNlP~~i~P~~~-~~~C~~~~C~~din~~CP~~L~v~~~~g-~vv~C~SaC~~f~~~~~CC~g~~~~  174 (219)
T cd09218          97 GGQDFYDVSLVDGYNLPVSITPQGG-SGGCRTAGCVADLNAVCPAELQVKNSGG-RVVACKSACLAFNTDEYCCRGAYGT  174 (219)
T ss_pred             CCCcceeeeeeccccCCEEEEecCC-CCCCCCCcccCcccccCCHHHeeccCCC-cEeeecCHHHhhCCccceecCCCCC
Confidence            5789999999999999999999864 4679999999999999999999997667 8999999999999999999999999


Q ss_pred             CCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEcc
Q 037992           84 PDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFC  128 (129)
Q Consensus        84 p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFC  128 (129)
                      |++|+|+.||++||++||+||+|+|||++++|+|+++++|+|+||
T Consensus       175 p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         175 PETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             CCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            999999999999999999999999999999999998899999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query129
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 2e-40
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 1e-39
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 8e-22
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 2e-21
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 6e-21
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 2e-19
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 5e-19
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 2e-18
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 3e-16
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 3e-16
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 4e-16
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 4e-16
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 5e-16
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 2e-15
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 6e-15
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 160 bits (405), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 82/129 (63%), Positives = 96/129 (74%), Gaps = 2/129 (1%) Query: 1 SENAGQDFYDVSLVDGFNLPLSLAPQXXXXXXXXXXXXPQNVNAVCPLELAVKGSDGSSV 60 + N GQD+YDVSLVDGFNLP+S+APQ P NVN VCP L VK +DGS V Sbjct: 96 AANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSC-PANVNKVCPAPLQVKAADGS-V 153 Query: 61 IACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGR 120 I+CKSACLA +YCCT TP+ CPPT+YS+IF+ QCPQAYSYAYDDK+STFTC+G Sbjct: 154 ISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGG 213 Query: 121 PNYAITFCP 129 P+Y ITFCP Sbjct: 214 PDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query129
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 6e-35
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 5e-33
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 3e-27
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 1e-25
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 3e-25
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 4e-09
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  119 bits (298), Expect = 6e-35
 Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 2/125 (1%)

Query: 5   GQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACK 64
           GQDFYDVSLVDGFNLP+S+ PQGG +G+C + SCP NVNAVCP EL  KGSDGS V+AC 
Sbjct: 100 GQDFYDVSLVDGFNLPMSVTPQGG-TGDCKTASCPANVNAVCPSELQKKGSDGS-VVACL 157

Query: 65  SACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYA 124
           SAC+    PQYCCT    TP+ CPPT+YS+IF   CP AYSYAYDDK  TFTC G PNYA
Sbjct: 158 SACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYA 217

Query: 125 ITFCP 129
           ITFCP
Sbjct: 218 ITFCP 222


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query129
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 99.68
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=1e-56  Score=352.95  Aligned_cols=125  Identities=70%  Similarity=1.368  Sum_probs=119.1

Q ss_pred             CCCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCC
Q 037992            3 NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFG   82 (129)
Q Consensus         3 ~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~   82 (129)
                      .+++|||||||||||||||+|+|.+| ++.|+.++|.+|||.+||+||||++.+| +||||+|||.+|++|||||||+|+
T Consensus        98 ~~~~dfYDVSlVDGfNlPm~i~P~~g-~~~C~~~~C~~dln~~CP~eL~v~~~~G-~~v~C~saC~af~~~~yCC~g~~~  175 (222)
T 2ahn_A           98 GGGQDFYDVSLVDGFNLPMSVTPQGG-TGDCKTASCPANVNAVCPSELQKKGSDG-SVVACLSACVKFGTPQYCCTPPQN  175 (222)
T ss_dssp             TTCEEEEEEECTTCBSSCEEEEEESC-BSCCCCEEECSCGGGGCCGGGEEECTTS-CEEEECCHHHHHCCHHHHCCTTSC
T ss_pred             CCCCceeeeecccccccceEEEecCC-CCCcccCcccCchhhhCCHHHeeecCCC-cEecccccccccCCCccccCCCCC
Confidence            35799999999999999999999875 4689999999999999999999987667 899999999999999999999999


Q ss_pred             CCCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEccC
Q 037992           83 TPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP  129 (129)
Q Consensus        83 ~p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFCP  129 (129)
                      +|++|+||.||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus       176 ~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          176 TPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             STTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             CCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            99999999999999999999999999999999999998899999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 129
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 2e-40
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 2e-40
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 6e-36
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
 Score =  132 bits (332), Expect = 2e-40
 Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 13/128 (10%)

Query: 3   NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIA 62
            +  DF+D+S++DGFN+P+S  P   G G C    C  N+N  CP  L V G        
Sbjct: 91  FSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-------G 143

Query: 63  CKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRP- 121
           C + C      QYCCT        C PT+ S+ FK +CP AYSY  DD +STFTCT    
Sbjct: 144 CNNPCTTFGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTT 198

Query: 122 NYAITFCP 129
           +Y + FCP
Sbjct: 199 DYKVMFCP 206


>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query129
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=2.7e-50  Score=311.98  Aligned_cols=114  Identities=46%  Similarity=1.057  Sum_probs=107.2

Q ss_pred             CCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCCC
Q 037992            4 AGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGT   83 (129)
Q Consensus         4 ~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~~   83 (129)
                      +++|||||||||||||||+|+|.++++..|+.++|.+|||..||+||||++       ||+|||.+|++|||||++    
T Consensus        92 ~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~-------~C~saC~~~~~~~~CCt~----  160 (208)
T d1auna_          92 SNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-------GCNNPCTTFGGQQYCCTQ----  160 (208)
T ss_dssp             GGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-------EECCHHHHTCSHHHHCTT----
T ss_pred             CCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC-------CCccceeecCCCccccCC----
Confidence            578999999999999999999987657789999999999999999999874       699999999999999974    


Q ss_pred             CCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCC-CceEEEccC
Q 037992           84 PDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGR-PNYAITFCP  129 (129)
Q Consensus        84 p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~-~~y~VtFCP  129 (129)
                       ++|+|++||++||++||+||+|||||++|+|+|+++ ++|+|+|||
T Consensus       161 -~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP  206 (208)
T d1auna_         161 -GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP  206 (208)
T ss_dssp             -SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred             -CcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCC
Confidence             789999999999999999999999999999999875 799999998



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure