Citrus Sinensis ID: 037992
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| 25091401 | 244 | RecName: Full=Thaumatin-like protein 1; | 0.984 | 0.520 | 0.790 | 1e-51 | |
| 32140539 | 244 | thaumatin/PR5-like protein [Pyrus pyrifo | 0.984 | 0.520 | 0.790 | 1e-51 | |
| 190613907 | 246 | putative allergen Pru p 2.01A [Prunus du | 0.984 | 0.516 | 0.775 | 7e-51 | |
| 359744030 | 246 | thaumatin-like protein 2 [Prunus persica | 0.984 | 0.516 | 0.767 | 6e-50 | |
| 225441133 | 242 | PREDICTED: thaumatin-like protein 1 [Vit | 0.968 | 0.516 | 0.763 | 9e-49 | |
| 190613911 | 246 | putative allergen Pru p 2.01B [Prunus du | 0.984 | 0.516 | 0.744 | 2e-48 | |
| 255556826 | 242 | Zeamatin precursor, putative [Ricinus co | 0.961 | 0.512 | 0.763 | 3e-48 | |
| 190613909 | 246 | putative allergen Pru du 2.01B [Prunus d | 0.984 | 0.516 | 0.744 | 4e-48 | |
| 190613905 | 246 | putative allergen Pru du 2.01A [Prunus d | 0.984 | 0.516 | 0.744 | 4e-48 | |
| 25091405 | 246 | RecName: Full=Thaumatin-like protein 1; | 0.984 | 0.516 | 0.736 | 2e-47 |
| >gi|25091401|sp|O80327.1|TLP1_PYRPY RecName: Full=Thaumatin-like protein 1; Flags: Precursor gi|3241854|dbj|BAA28872.1| thaumatin-like protein precursor [Pyrus pyrifolia] | Back alignment and taxonomy information |
|---|
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 112/129 (86%), Gaps = 2/129 (1%)
Query: 1 SENAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSV 60
+ N GQDFYDVSLVDGFNLP+ LAP+GG SG+C+STSC N+N VCP EL+ KGSDGS V
Sbjct: 118 ATNGGQDFYDVSLVDGFNLPIKLAPRGG-SGDCNSTSCAANINTVCPAELSDKGSDGS-V 175
Query: 61 IACKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGR 120
I CKSACLALNQPQYCCTG +GTPD CPPTD+SK+FK QCPQAYSYAYDDKSSTFTC G
Sbjct: 176 IGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGG 235
Query: 121 PNYAITFCP 129
PNY ITFCP
Sbjct: 236 PNYEITFCP 244
|
Source: Pyrus pyrifolia Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|32140539|dbj|BAC78212.1| thaumatin/PR5-like protein [Pyrus pyrifolia] | Back alignment and taxonomy information |
|---|
| >gi|190613907|gb|ACE80957.1| putative allergen Pru p 2.01A [Prunus dulcis x Prunus persica] | Back alignment and taxonomy information |
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| >gi|359744030|gb|AEV57471.1| thaumatin-like protein 2 [Prunus persica] | Back alignment and taxonomy information |
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| >gi|225441133|ref|XP_002265852.1| PREDICTED: thaumatin-like protein 1 [Vitis vinifera] gi|297739994|emb|CBI30176.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|190613911|gb|ACE80959.1| putative allergen Pru p 2.01B [Prunus dulcis x Prunus persica] | Back alignment and taxonomy information |
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| >gi|255556826|ref|XP_002519446.1| Zeamatin precursor, putative [Ricinus communis] gi|223541309|gb|EEF42860.1| Zeamatin precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|190613909|gb|ACE80958.1| putative allergen Pru du 2.01B [Prunus dulcis x Prunus persica] | Back alignment and taxonomy information |
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| >gi|190613905|gb|ACE80956.1| putative allergen Pru du 2.01A [Prunus dulcis x Prunus persica] | Back alignment and taxonomy information |
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| >gi|25091405|sp|P83332.1|TLP1_PRUPE RecName: Full=Thaumatin-like protein 1; AltName: Full=PpAZ44; Flags: Precursor gi|19879968|gb|AAM00216.1|AF362988_1 thaumatin-like protein [Prunus persica] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| UNIPROTKB|O80327 | 244 | TL1 "Thaumatin-like protein 1" | 0.968 | 0.512 | 0.732 | 6.7e-49 | |
| UNIPROTKB|P83332 | 246 | P83332 "Thaumatin-like protein | 0.984 | 0.516 | 0.697 | 2.3e-46 | |
| UNIPROTKB|Q9SMH2 | 243 | TL1 "Thaumatin-like protein 1" | 0.968 | 0.514 | 0.661 | 2.5e-42 | |
| UNIPROTKB|Q9FSG7 | 246 | TL1 "Thaumatin-like protein 1a | 0.968 | 0.508 | 0.645 | 4e-42 | |
| UNIPROTKB|P83336 | 212 | P83336 "Thaumatin-like protein | 0.968 | 0.589 | 0.637 | 6.6e-42 | |
| UNIPROTKB|P83335 | 242 | P83335 "Thaumatin-like protein | 0.953 | 0.508 | 0.608 | 7e-38 | |
| TAIR|locus:2198641 | 316 | AT1G20030 "AT1G20030" [Arabido | 0.984 | 0.401 | 0.550 | 8e-37 | |
| TAIR|locus:2016442 | 247 | AT1G19320 "AT1G19320" [Arabido | 0.953 | 0.497 | 0.590 | 1.7e-36 | |
| TAIR|locus:2005549 | 330 | AT1G75800 "AT1G75800" [Arabido | 0.968 | 0.378 | 0.551 | 1.9e-35 | |
| TAIR|locus:2027161 | 246 | TLP-3 "AT1G75030" [Arabidopsis | 0.984 | 0.516 | 0.542 | 3.1e-35 |
| UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] | Back alignment and assigned GO terms |
|---|
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 93/127 (73%), Positives = 100/127 (78%)
Query: 3 NAGQDFYDVSLVDGFNLPLSLAPQXXXXXXXXXXXXPQNVNAVCPLELAVKGSDGSSVIA 62
N GQDFYDVSLVDGFNLP+ LAP+ N+N VCP EL+ KGSDGS VI
Sbjct: 120 NGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNSTSCAA-NINTVCPAELSDKGSDGS-VIG 177
Query: 63 CKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPN 122
CKSACLALNQPQYCCTG +GTPD CPPTD+SK+FK QCPQAYSYAYDDKSSTFTC G PN
Sbjct: 178 CKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPN 237
Query: 123 YAITFCP 129
Y ITFCP
Sbjct: 238 YEITFCP 244
|
|
| UNIPROTKB|P83332 P83332 "Thaumatin-like protein 1" [Prunus persica (taxid:3760)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9SMH2 TL1 "Thaumatin-like protein 1" [Castanea sativa (taxid:21020)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9FSG7 TL1 "Thaumatin-like protein 1a" [Malus x domestica (taxid:3750)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P83336 P83336 "Thaumatin-like protein 1b" [Malus x domestica (taxid:3750)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P83335 P83335 "Thaumatin-like protein 2" [Prunus persica (taxid:3760)] | Back alignment and assigned GO terms |
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| TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00000591001 | SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (246 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 129 | |||
| cd09218 | 219 | cd09218, TLP-PA, allergenic/antifungal thaumatin-l | 4e-68 | |
| pfam00314 | 212 | pfam00314, Thaumatin, Thaumatin family | 4e-58 | |
| smart00205 | 218 | smart00205, THN, Thaumatin family | 3e-53 | |
| cd09219 | 229 | cd09219, TLP-F, thaumatin-like proteins: basidiomy | 2e-22 | |
| cd09217 | 151 | cd09217, TLP-P, thaumatin and allergenic/antifunga | 1e-09 | |
| cd09215 | 157 | cd09215, Thaumatin-like, the sweet-tasting protein | 3e-09 | |
| cd09215 | 157 | cd09215, Thaumatin-like, the sweet-tasting protein | 9e-07 | |
| cd08961 | 153 | cd08961, GH64-TLP-SF, glycoside hydrolase family 6 | 2e-05 | |
| cd08961 | 153 | cd08961, GH64-TLP-SF, glycoside hydrolase family 6 | 2e-05 |
| >gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 4e-68
Identities = 81/126 (64%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
Query: 3 NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIA 62
+ GQDFYDVSLVDG+NLP+S+ PQGG SG C + C ++NAVCP EL VK S G V+A
Sbjct: 96 SGGQDFYDVSLVDGYNLPVSITPQGG-SGGCRTAGCVADLNAVCPAELQVKNSGGR-VVA 153
Query: 63 CKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPN 122
CKSACLA N +YCC G +GTP+ C PT YS++FK CPQAYSYAYDD +STFTC+ N
Sbjct: 154 CKSACLAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGAN 213
Query: 123 YAITFC 128
Y ITFC
Sbjct: 214 YVITFC 219
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219 |
| >gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family | Back alignment and domain information |
|---|
| >gnl|CDD|128501 smart00205, THN, Thaumatin family | Back alignment and domain information |
|---|
| >gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
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| >gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
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| >gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| cd09218 | 219 | TLP-PA allergenic/antifungal thaumatin-like protei | 100.0 | |
| smart00205 | 218 | THN Thaumatin family. The thaumatin family gathers | 100.0 | |
| cd09219 | 229 | TLP-F thaumatin-like proteins: basidiomycete homol | 100.0 | |
| PF00314 | 213 | Thaumatin: Thaumatin family; InterPro: IPR001938 T | 100.0 | |
| cd09215 | 157 | Thaumatin-like the sweet-tasting protein, thaumati | 99.89 | |
| cd09217 | 151 | TLP-P thaumatin and allergenic/antifungal thaumati | 99.78 | |
| cd08961 | 153 | GH64-TLP-SF glycoside hydrolase family 64 (beta-1, | 99.72 |
| >cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-53 Score=331.98 Aligned_cols=123 Identities=66% Similarity=1.310 Sum_probs=117.2
Q ss_pred CCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCCC
Q 037992 4 AGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGT 83 (129)
Q Consensus 4 ~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~~ 83 (129)
+++|||||||||||||||.|+|.++ ...|+.++|.+|||+.||+||||++.+| .||||+|||++|++|||||||+|++
T Consensus 97 ~~~d~YdvSlVdGfNlP~~i~P~~~-~~~C~~~~C~~din~~CP~~L~v~~~~g-~vv~C~SaC~~f~~~~~CC~g~~~~ 174 (219)
T cd09218 97 GGQDFYDVSLVDGYNLPVSITPQGG-SGGCRTAGCVADLNAVCPAELQVKNSGG-RVVACKSACLAFNTDEYCCRGAYGT 174 (219)
T ss_pred CCCcceeeeeeccccCCEEEEecCC-CCCCCCCcccCcccccCCHHHeeccCCC-cEeeecCHHHhhCCccceecCCCCC
Confidence 5789999999999999999999864 4679999999999999999999997667 8999999999999999999999999
Q ss_pred CCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEcc
Q 037992 84 PDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFC 128 (129)
Q Consensus 84 p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFC 128 (129)
|++|+|+.||++||++||+||+|+|||++++|+|+++++|+|+||
T Consensus 175 p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC 219 (219)
T cd09218 175 PETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219 (219)
T ss_pred CCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence 999999999999999999999999999999999998899999998
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele |
| >smart00205 THN Thaumatin family | Back alignment and domain information |
|---|
| >cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein | Back alignment and domain information |
|---|
| >cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 129 | ||||
| 3zs3_A | 222 | High Resolution Structure Of Mal D 2, The Thaumatin | 2e-40 | ||
| 2ahn_A | 222 | High Resolution Structure Of A Cherry Allergen Pru | 1e-39 | ||
| 1pcv_A | 205 | Crystal Structure Of Osmotin, A Plant Antifungal Pr | 8e-22 | ||
| 1du5_A | 206 | The Crystal Structure Of Zeamatin. Length = 206 | 2e-21 | ||
| 2i0w_A | 207 | Crystal Structure Analysis Of Np24-I, A Thaumatin-L | 6e-21 | ||
| 1z3q_A | 200 | Resolution Of The Structure Of The Allergenic And A | 2e-19 | ||
| 1aun_A | 208 | Pathogenesis-Related Protein 5d From Nicotiana Taba | 5e-19 | ||
| 4h8t_A | 198 | Structure Of Haze Forming Proteins In White Wines: | 2e-18 | ||
| 1kwn_A | 207 | 1.2 A Structure Of Thaumatin Crystallized In Gel Le | 3e-16 | ||
| 2blr_A | 206 | Thaumatin Before A High Dose X-Ray "burn" Length = | 3e-16 | ||
| 1thv_A | 207 | The Structures Of Three Crystal Forms Of The Sweet | 4e-16 | ||
| 1rqw_A | 207 | Thaumatin Structure At 1.05 A Resolution Length = 2 | 4e-16 | ||
| 3aok_A | 207 | Crystal Structure Of Sweet-Tasting Protein Thaumati | 5e-16 | ||
| 2d8o_A | 207 | Structure Of Vil-Thaumatin Length = 207 | 2e-15 | ||
| 2d8p_A | 207 | Structure Of Hyper-Vil-Thaumatin Length = 207 | 6e-15 |
| >pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 | Back alignment and structure |
|
| >pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 | Back alignment and structure |
| >pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 | Back alignment and structure |
| >pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 | Back alignment and structure |
| >pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 | Back alignment and structure |
| >pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 | Back alignment and structure |
| >pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 | Back alignment and structure |
| >pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 | Back alignment and structure |
| >pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 | Back alignment and structure |
| >pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 | Back alignment and structure |
| >pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 | Back alignment and structure |
| >pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 | Back alignment and structure |
| >pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 | Back alignment and structure |
| >pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 129 | |||
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 6e-35 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 5e-33 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 3e-27 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 1e-25 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 3e-25 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 4e-09 |
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 | Back alignment and structure |
|---|
Score = 119 bits (298), Expect = 6e-35
Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
Query: 5 GQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACK 64
GQDFYDVSLVDGFNLP+S+ PQGG +G+C + SCP NVNAVCP EL KGSDGS V+AC
Sbjct: 100 GQDFYDVSLVDGFNLPMSVTPQGG-TGDCKTASCPANVNAVCPSELQKKGSDGS-VVACL 157
Query: 65 SACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYA 124
SAC+ PQYCCT TP+ CPPT+YS+IF CP AYSYAYDDK TFTC G PNYA
Sbjct: 158 SACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYA 217
Query: 125 ITFCP 129
ITFCP
Sbjct: 218 ITFCP 222
|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 | Back alignment and structure |
|---|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 100.0 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 100.0 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 100.0 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 100.0 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 100.0 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 99.68 |
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-56 Score=352.95 Aligned_cols=125 Identities=70% Similarity=1.368 Sum_probs=119.1
Q ss_pred CCCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCC
Q 037992 3 NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFG 82 (129)
Q Consensus 3 ~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~ 82 (129)
.+++|||||||||||||||+|+|.+| ++.|+.++|.+|||.+||+||||++.+| +||||+|||.+|++|||||||+|+
T Consensus 98 ~~~~dfYDVSlVDGfNlPm~i~P~~g-~~~C~~~~C~~dln~~CP~eL~v~~~~G-~~v~C~saC~af~~~~yCC~g~~~ 175 (222)
T 2ahn_A 98 GGGQDFYDVSLVDGFNLPMSVTPQGG-TGDCKTASCPANVNAVCPSELQKKGSDG-SVVACLSACVKFGTPQYCCTPPQN 175 (222)
T ss_dssp TTCEEEEEEECTTCBSSCEEEEEESC-BSCCCCEEECSCGGGGCCGGGEEECTTS-CEEEECCHHHHHCCHHHHCCTTSC
T ss_pred CCCCceeeeecccccccceEEEecCC-CCCcccCcccCchhhhCCHHHeeecCCC-cEecccccccccCCCccccCCCCC
Confidence 35799999999999999999999875 4689999999999999999999987667 899999999999999999999999
Q ss_pred CCCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEccC
Q 037992 83 TPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP 129 (129)
Q Consensus 83 ~p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFCP 129 (129)
+|++|+||.||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 176 ~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 176 TPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp STTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred CCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999999999999999999999998899999998
|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A | Back alignment and structure |
|---|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 129 | ||||
| d1auna_ | 208 | b.25.1.1 (A:) Pathogenesis-related protein 5d {Com | 2e-40 | |
| d1du5a_ | 206 | b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 | 2e-40 | |
| d1rqwa_ | 207 | b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d | 6e-36 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 132 bits (332), Expect = 2e-40
Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 3 NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIA 62
+ DF+D+S++DGFN+P+S P G G C C N+N CP L V G
Sbjct: 91 FSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-------G 143
Query: 63 CKSACLALNQPQYCCTGDFGTPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRP- 121
C + C QYCCT C PT+ S+ FK +CP AYSY DD +STFTCT
Sbjct: 144 CNNPCTTFGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTT 198
Query: 122 NYAITFCP 129
+Y + FCP
Sbjct: 199 DYKVMFCP 206
|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| d1auna_ | 208 | Pathogenesis-related protein 5d {Common tobacco (N | 100.0 | |
| d1du5a_ | 206 | Zeamatin {Maize (Zea mays) [TaxId: 4577]} | 100.0 | |
| d1rqwa_ | 207 | Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax | 100.0 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=2.7e-50 Score=311.98 Aligned_cols=114 Identities=46% Similarity=1.057 Sum_probs=107.2
Q ss_pred CCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCCC
Q 037992 4 AGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGT 83 (129)
Q Consensus 4 ~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~~ 83 (129)
+++|||||||||||||||+|+|.++++..|+.++|.+|||..||+||||++ ||+|||.+|++|||||++
T Consensus 92 ~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~-------~C~saC~~~~~~~~CCt~---- 160 (208)
T d1auna_ 92 SNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-------GCNNPCTTFGGQQYCCTQ---- 160 (208)
T ss_dssp GGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-------EECCHHHHTCSHHHHCTT----
T ss_pred CCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC-------CCccceeecCCCccccCC----
Confidence 578999999999999999999987657789999999999999999999874 699999999999999974
Q ss_pred CCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCC-CceEEEccC
Q 037992 84 PDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGR-PNYAITFCP 129 (129)
Q Consensus 84 p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~-~~y~VtFCP 129 (129)
++|+|++||++||++||+||+|||||++|+|+|+++ ++|+|+|||
T Consensus 161 -~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP 206 (208)
T d1auna_ 161 -GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 206 (208)
T ss_dssp -SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred -CcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCC
Confidence 789999999999999999999999999999999875 799999998
|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} | Back information, alignment and structure |
|---|