Citrus Sinensis ID: 038027


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
MDLLISCILWLVFTLVWVMALSFISSGKRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENCSA
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccEEEEcccccEEEEccHHHHHHHHHHccccccccccccccccccccccccccEEccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccc
cHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEcccEcHHHcccccHHHHHHHHHHcccEEEEEcccccEEEEccHHHHHHHHHcccEEEccccccccHHHHHHEcccccEEEccccHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHHccc
MDLLISCILWLVFTLVWVMALSFIssgkrkglppgprpypvignllelggkphkSLAKLAKIhgpimslrlGQVTTVVISSPSMAKAILKEHdslfcdrkvpesilsqpyqhhefslvwlpvsplWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENCSA
MDLLISCILWLVFTLVWVMALSFIssgkrkglppgPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFtnqkldanqdlRRKKIKDLLAYVEENCSA
MDLLISCILWLVFTLVWVMALSFISSgkrkglppgprpypVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENCSA
**LLISCILWLVFTLVWVMALSFISS***********PYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYV******
MDLLISCILWLVFTLVWVMAL****************PYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN***
MDLLISCILWLVFTLVWVMALSFISSGKRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENCSA
MDLLISCILWLVFTLVWVMALSFISSGKRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE****
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDLLISCILWLVFTLVWVMALSFISSGKRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENCSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query167 2.2.26 [Sep-21-2011]
Q8VWZ7 493 Geraniol 8-hydroxylase OS N/A no 0.976 0.330 0.514 7e-42
O23976 490 7-ethoxycoumarin O-deethy N/A no 0.904 0.308 0.5 3e-37
D1MI46 495 Geraniol 8-hydroxylase OS N/A no 0.940 0.317 0.490 2e-33
O64635 511 Cytochrome P450 76C4 OS=A yes no 0.976 0.318 0.406 1e-30
O64900 488 (S)-N-methylcoclaurine 3' N/A no 0.874 0.299 0.383 7e-28
O64899 487 (S)-N-methylcoclaurine 3' N/A no 0.874 0.299 0.377 2e-27
O64636 512 Cytochrome P450 76C1 OS=A no no 0.958 0.312 0.378 6e-27
O64638 515 Cytochrome P450 76C3 OS=A no no 0.718 0.233 0.434 2e-25
P37122 505 Cytochrome P450 76A2 OS=S N/A no 0.802 0.265 0.323 4e-23
Q9ZU07 496 Cytochrome P450 71B12 OS= no no 0.934 0.314 0.341 1e-22
>sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1 Back     alignment and function desciption
 Score =  169 bits (428), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 86/167 (51%), Positives = 118/167 (70%), Gaps = 4/167 (2%)

Query: 1   MDLLISCILWLVFTLVWVMALSFISSGKRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLA 60
           MD L + IL L+F L    A S++S  + K LPPGP P P IG+L  LG +PHKSLAKL+
Sbjct: 1   MDYL-TIILTLLFALTLYEAFSYLSR-RTKNLPPGPSPLPFIGSLHLLGDQPHKSLAKLS 58

Query: 61  KIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWL 120
           K HGPIMSL+LGQ+TT+VISS +MAK +L++ D  F  R VP ++    +   +FS+VWL
Sbjct: 59  KKHGPIMSLKLGQITTIVISSSTMAKEVLQKQDLAFSSRSVPNAL--HAHNQFKFSVVWL 116

Query: 121 PVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENCSA 167
           PV+  WRSLRK+ N +IF+  +LDANQ LR +K+++L+AY  +N  +
Sbjct: 117 PVASRWRSLRKVLNSNIFSGNRLDANQHLRTRKVQELIAYCRKNSQS 163




Hydroxylase involved in the biosynthesis of hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine. Also able to hydroxylate in vitro nerol and to catalyze 3'-hydroxylation of the flavanone naringenin to form eriodictyol. No activity with apigenin, kaempferol, p-coumaric acid and ferulic acid as substrates.
Catharanthus roseus (taxid: 4058)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 5EC: 2
>sp|O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1 Back     alignment and function description
>sp|D1MI46|C76BA_SWEMU Geraniol 8-hydroxylase OS=Swertia mussotii GN=CYP76B10 PE=1 SV=1 Back     alignment and function description
>sp|O64635|C76C4_ARATH Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=3 SV=1 Back     alignment and function description
>sp|O64900|C80B2_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1 Back     alignment and function description
>sp|O64899|C80B1_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1 Back     alignment and function description
>sp|O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1 Back     alignment and function description
>sp|O64638|C76C3_ARATH Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2 Back     alignment and function description
>sp|P37122|C76A2_SOLME Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZU07|C71BC_ARATH Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query167
224071632 496 cytochrome P450 [Populus trichocarpa] gi 0.976 0.328 0.565 1e-49
255537171 377 cytochrome P450, putative [Ricinus commu 0.964 0.427 0.605 2e-48
224058639 493 cytochrome P450 [Populus trichocarpa] gi 0.904 0.306 0.568 9e-47
297742026 594 unnamed protein product [Vitis vinifera] 0.982 0.276 0.532 4e-45
225427085 498 PREDICTED: cytochrome P450 76C4 [Vitis v 0.982 0.329 0.532 5e-45
255537173 501 cytochrome P450, putative [Ricinus commu 0.964 0.321 0.535 3e-42
388504812 318 unknown [Lotus japonicus] 0.976 0.512 0.472 5e-42
359474277 499 PREDICTED: LOW QUALITY PROTEIN: 7-ethoxy 0.946 0.316 0.502 8e-42
46403209 498 cytochrome P450 [Hypericum androsaemum] 0.964 0.323 0.506 1e-41
356575857 501 PREDICTED: cytochrome P450 76C4-like [Gl 0.958 0.319 0.512 3e-41
>gi|224071632|ref|XP_002303546.1| cytochrome P450 [Populus trichocarpa] gi|222840978|gb|EEE78525.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 95/168 (56%), Positives = 124/168 (73%), Gaps = 5/168 (2%)

Query: 1   MDLLISCILWLVFTLVWVMALSFI---SSGKRKGLPPGPRPYPVIGNLLELGGKPHKSLA 57
           M+  IS +L+ + T   + +L +I   S  K   LPPGP   P++GNLL+LG KPHKSLA
Sbjct: 1   MNFFISVLLYFLLTFAVIQSLDYILRRSKRKSGKLPPGPSRLPIVGNLLDLGDKPHKSLA 60

Query: 58  KLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSL 117
           KLAK HG +MSL+LGQVTT+V+SS +MAK +L++HD  FC+R V +++  +   HHE  +
Sbjct: 61  KLAKTHGQLMSLKLGQVTTIVVSSATMAKEVLQKHDLTFCNRTVVDAV--RALDHHEAGI 118

Query: 118 VWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENC 165
            WLPV+  WR+LRKICN HIFT QKLDANQDLRRKK++DLLA V+E C
Sbjct: 119 AWLPVATRWRNLRKICNSHIFTAQKLDANQDLRRKKVQDLLAEVQERC 166




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537171|ref|XP_002509652.1| cytochrome P450, putative [Ricinus communis] gi|223549551|gb|EEF51039.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224058639|ref|XP_002299579.1| cytochrome P450 [Populus trichocarpa] gi|222846837|gb|EEE84384.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297742026|emb|CBI33813.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225427085|ref|XP_002276561.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255537173|ref|XP_002509653.1| cytochrome P450, putative [Ricinus communis] gi|223549552|gb|EEF51040.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|388504812|gb|AFK40472.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|359474277|ref|XP_003631428.1| PREDICTED: LOW QUALITY PROTEIN: 7-ethoxycoumarin O-deethylase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|46403209|gb|AAS92624.1| cytochrome P450 [Hypericum androsaemum] Back     alignment and taxonomy information
>gi|356575857|ref|XP_003556053.1| PREDICTED: cytochrome P450 76C4-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query167
UNIPROTKB|Q8VWZ7 493 CYP76B6 "Geraniol 8-hydroxylas 0.958 0.324 0.475 3.2e-33
UNIPROTKB|D1MI46 495 CYP76B10 "Geraniol 8-hydroxyla 0.964 0.325 0.424 4.2e-31
TAIR|locus:2043614 515 CYP76C3 ""cytochrome P450, fam 0.724 0.234 0.430 2.3e-24
TAIR|locus:2043694 511 CYP76C4 ""cytochrome P450, fam 0.946 0.309 0.376 6.1e-23
TAIR|locus:2100982 498 CYP76C7 ""cytochrome P450, fam 0.736 0.246 0.416 9.2e-23
TAIR|locus:2043699 512 CYP76C1 ""cytochrome P450, fam 0.730 0.238 0.392 1.3e-21
TAIR|locus:2043605 512 CYP76C2 ""cytochrome P450, fam 0.730 0.238 0.4 3.5e-21
TAIR|locus:2012693 511 CYP76C6 ""cytochrome P450, fam 0.736 0.240 0.388 4.3e-20
TAIR|locus:2139084 516 CYP706A4 ""cytochrome P450, fa 0.724 0.234 0.382 1.9e-18
TAIR|locus:2139099 520 CYP706A5 ""cytochrome P450, fa 0.682 0.219 0.413 2e-18
UNIPROTKB|Q8VWZ7 CYP76B6 "Geraniol 8-hydroxylase" [Catharanthus roseus (taxid:4058)] Back     alignment and assigned GO terms
 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 78/164 (47%), Positives = 108/164 (65%)

Query:     1 MDLLISCILWLVFTLVWVMALSFISSXXXXXXXXXXXXXXVIGNLLELGGKPHKSLAKLA 60
             MD L + IL L+F L    A S++S                IG+L  LG +PHKSLAKL+
Sbjct:     1 MDYL-TIILTLLFALTLYEAFSYLSRRTKNLPPGPSPLPF-IGSLHLLGDQPHKSLAKLS 58

Query:    61 KIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWL 120
             K HGPIMSL+LGQ+TT+VISS +MAK +L++ D  F  R VP ++    +   +FS+VWL
Sbjct:    59 KKHGPIMSLKLGQITTIVISSSTMAKEVLQKQDLAFSSRSVPNAL--HAHNQFKFSVVWL 116

Query:   121 PVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164
             PV+  WRSLRK+ N +IF+  +LDANQ LR +K+++L+AY  +N
Sbjct:   117 PVASRWRSLRKVLNSNIFSGNRLDANQHLRTRKVQELIAYCRKN 160




GO:0016099 "monoterpenoid biosynthetic process" evidence=IDA
GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=IDA
UNIPROTKB|D1MI46 CYP76B10 "Geraniol 8-hydroxylase" [Swertia mussotii (taxid:137888)] Back     alignment and assigned GO terms
TAIR|locus:2043614 CYP76C3 ""cytochrome P450, family 76, subfamily C, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043694 CYP76C4 ""cytochrome P450, family 76, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100982 CYP76C7 ""cytochrome P450, family 76, subfamily C, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043699 CYP76C1 ""cytochrome P450, family 76, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012693 CYP76C6 ""cytochrome P450, family 76, subfamily C, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139084 CYP706A4 ""cytochrome P450, family 706, subfamily A, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139099 CYP706A5 ""cytochrome P450, family 706, subfamily A, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query167
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 3e-34
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 2e-27
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 1e-23
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 2e-22
pfam00067 461 pfam00067, p450, Cytochrome P450 2e-20
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 1e-19
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 2e-17
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 4e-16
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 5e-13
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 2e-12
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 4e-10
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 3e-08
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 1e-05
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
 Score =  125 bits (315), Expect = 3e-34
 Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 11/160 (6%)

Query: 1   MDLLISCILWLVFTLVWVMALSFISSGKRKG---LPPGPRPYPVIGNLLELGGKPHKSLA 57
           MDL +  +L  V   V V  L     G  K    LPPGPR +PV+GNL +LG KPH ++A
Sbjct: 1   MDLPLPLLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMA 60

Query: 58  KLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPES---ILSQPYQHHE 114
            LAK +GP+  LR G V  VV +S S+A   L+ HD+ F +R  P S    ++  YQ   
Sbjct: 61  ALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRP-PNSGAEHMAYNYQ--- 116

Query: 115 FSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKI 154
             LV+ P  P WR+LRKIC +H+F+ + LD  + +R +++
Sbjct: 117 -DLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEV 155


Length = 517

>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 167
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 99.95
PLN02687 517 flavonoid 3'-monooxygenase 99.94
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.92
PLN00168 519 Cytochrome P450; Provisional 99.92
PLN03112 514 cytochrome P450 family protein; Provisional 99.92
PLN03234 499 cytochrome P450 83B1; Provisional 99.91
PLN02394 503 trans-cinnamate 4-monooxygenase 99.91
PTZ00404 482 cytochrome P450; Provisional 99.91
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.91
PLN02183 516 ferulate 5-hydroxylase 99.91
PLN02971 543 tryptophan N-hydroxylase 99.91
PLN02966 502 cytochrome P450 83A1 99.9
PLN02290 516 cytokinin trans-hydroxylase 99.9
PLN02196 463 abscisic acid 8'-hydroxylase 99.89
PLN02774 463 brassinosteroid-6-oxidase 99.88
PLN02500 490 cytochrome P450 90B1 99.88
PLN02655 466 ent-kaurene oxidase 99.87
PLN02302 490 ent-kaurenoic acid oxidase 99.85
PLN03018 534 homomethionine N-hydroxylase 99.83
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.83
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.81
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.81
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.8
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.8
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.79
PLN02936 489 epsilon-ring hydroxylase 99.75
PLN02738 633 carotene beta-ring hydroxylase 99.75
PLN02648 480 allene oxide synthase 99.72
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.63
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.6
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.47
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 98.89
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
Probab=99.95  E-value=9.6e-27  Score=172.54  Aligned_cols=135  Identities=35%  Similarity=0.626  Sum_probs=120.1

Q ss_pred             CCCCCCCCCCCCCccccccccCCCC-chHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCC-ccc
Q 038027           27 GKRKGLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKV-PES  104 (167)
Q Consensus        27 ~~~~~~~pgp~~~p~~g~~~~~~~~-~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~-~~~  104 (167)
                      +++.+.||||+++|++||++++... ++..+.+++++|||++.+++|..++|+++|+++++|++.+++..|.+|+. ...
T Consensus        22 ~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~  101 (489)
T KOG0156|consen   22 RKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTAT  101 (489)
T ss_pred             cCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            3347899999999999999999665 99999999999999999999999999999999999999999999999997 223


Q ss_pred             cccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027          105 ILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE  163 (167)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~  163 (167)
                      .  +.+...+.+++++.+|+.||.+||...+..|+...++++...-.++++.+++++.+
T Consensus       102 ~--~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~  158 (489)
T KOG0156|consen  102 L--KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK  158 (489)
T ss_pred             H--HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh
Confidence            2  33444578999998999999999988789999999999988889999999999875



>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query167
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 6e-04
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 7e-04
3pm0_A 507 Structural Characterization Of The Complex Between 8e-04
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure

Iteration: 1

Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%) Query: 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISS-PSMAKAILKEHDSLFCDR 99 +IG++L LG PH +L+++++ +G ++ +R+G VV+S ++ +A++++ D Sbjct: 21 LIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRP 80 Query: 100 KVPESILSQPYQHHEFSLVWLPVS-PLWRSLRKICN 134 + L Q FS P S P+W + R++ Sbjct: 81 DLYTFTLISNGQSMSFS----PDSGPVWAARRRLAQ 112
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query167
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 4e-38
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 3e-34
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 9e-34
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 2e-33
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 1e-24
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 5e-24
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 1e-22
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 5e-22
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 1e-21
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 2e-20
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 2e-20
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 2e-19
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 8e-19
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 9e-19
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 9e-18
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 3e-17
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 5e-16
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 2e-13
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 3e-13
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 2e-12
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 2e-11
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 7e-11
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 1e-10
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 6e-10
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 9e-08
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 2e-04
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 3e-04
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
 Score =  134 bits (339), Expect = 4e-38
 Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 10/149 (6%)

Query: 20  ALSFISSGKRKGLPPGPRP-YPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVV 78
           ++ +    +R+  PP  +   P +G+ LE G    K L ++ + HG I ++R   +   V
Sbjct: 7   SVLYGRRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITV 66

Query: 79  ISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIF 138
           +   +   A+L +  SL         +L +      F+++    +P     R   +   F
Sbjct: 67  LLDSNCYDAVLSDVASLDQTS--YAQVLMKRI----FNMILPSHNPESEKKRAEMH---F 117

Query: 139 TNQKLDANQDLRRKKIKDLLAYVEENCSA 167
               L    +  +  ++ L+   E     
Sbjct: 118 QGASLTQLSNSMQNNLRLLMTPSEMGLKT 146


>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query167
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.91
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.9
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.9
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.89
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.89
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.88
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.87
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.87
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.87
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.86
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.85
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.85
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.85
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.84
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.84
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.84
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.84
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.83
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.83
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.82
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.81
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.8
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.79
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.75
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.72
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.72
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.72
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.71
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.7
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.7
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.69
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.67
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.67
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.66
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.64
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.64
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.63
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.63
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.6
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.59
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.58
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.58
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.58
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.57
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.57
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.57
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.56
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.55
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.54
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.54
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.54
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.53
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.51
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.51
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.51
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.5
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.5
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.48
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.48
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.46
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.45
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.43
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.43
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.42
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.4
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.39
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.37
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.36
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.34
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.33
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.32
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.24
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.22
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.12
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.02
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.01
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 97.46
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
Probab=99.91  E-value=3.2e-24  Score=159.39  Aligned_cols=128  Identities=23%  Similarity=0.312  Sum_probs=108.5

Q ss_pred             CCCCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhc-ccccCCCCCcccccc
Q 038027           29 RKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEH-DSLFCDRKVPESILS  107 (167)
Q Consensus        29 ~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~-~~~~~~~~~~~~~~~  107 (167)
                      +.+.+|||+++|++||++.+..+++..+.+|+++||||+++++++.++++++||+++++|+.++ ...|.+++.....  
T Consensus        12 k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~--   89 (485)
T 3nxu_A           12 KKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV--   89 (485)
T ss_dssp             HHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCC--
T ss_pred             hhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccc--
Confidence            3467899999999999999877888999999999999999999999999999999999999876 4566665543332  


Q ss_pred             CccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027          108 QPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE  163 (167)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~  163 (167)
                      .   ..+.++ +..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus        90 ~---~~~~~l-~~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~  140 (485)
T 3nxu_A           90 G---FMKSAI-SIAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRR  140 (485)
T ss_dssp             G---GGGGST-TTCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c---ccccCc-cccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2   223444 444599999999999 79999999999999999999999999865



>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 167
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 2e-26
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 3e-24
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 6e-24
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 7e-23
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 5e-22
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 1e-21
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 7e-14
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 4e-09
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 1e-08
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2c9
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  101 bits (251), Expect = 2e-26
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 29  RKGLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKA 87
           R  LPPGP P PVIGN+L++G K   KSL  L+K++GP+ +L  G    VV+      K 
Sbjct: 1   RGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKE 60

Query: 88  ILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTN 140
            L +    F  R +                        W+ +R+   M +   
Sbjct: 61  ALIDLGEEFSGRGIFPLAERANRGFGIVFSNG----KKWKEIRRFSLMTLRNF 109


>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query167
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.9
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.9
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.83
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.83
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.8
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.79
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.7
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.67
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.61
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.55
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.46
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.42
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.41
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.36
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.25
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.16
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.1
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.1
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 98.92
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 98.82
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.57
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90  E-value=9.3e-24  Score=154.25  Aligned_cols=127  Identities=21%  Similarity=0.262  Sum_probs=106.7

Q ss_pred             CCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccc-cCCCCCccccccCc
Q 038027           31 GLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSL-FCDRKVPESILSQP  109 (167)
Q Consensus        31 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~-~~~~~~~~~~~~~~  109 (167)
                      +++|||+++|++|+++.+..+++.++.+++++||||+++++++.++++++||+++++|+.++... +..+.....     
T Consensus         9 ~~iPGP~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~l~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~-----   83 (472)
T d1tqna_           9 LGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP-----   83 (472)
T ss_dssp             TTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCBCCCCSC-----
T ss_pred             cCCCCCCCcCceeEHHHhhCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHhcCCcccccCCccccc-----
Confidence            57899999999999999988999999999999999999999999999999999999999766543 333222222     


Q ss_pred             cccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027          110 YQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN  164 (167)
Q Consensus       110 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~  164 (167)
                      ....++++++ .+|+.|+.+|+++ ++.|+.++++.+.+.+.++++++++.|.+.
T Consensus        84 ~~~~~~~i~~-~~g~~~~~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~  136 (472)
T d1tqna_          84 VGFMKSAISI-AEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRRE  136 (472)
T ss_dssp             CGGGGGSTTT-CCHHHHHHHHHHT-TGGGSHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCceec-cCcHHHHHhhhhc-Cccccchhhhcccchhhhhhhccccccccc
Confidence            2223455555 4599999999999 799999999999999999999999999764



>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure