Citrus Sinensis ID: 038161

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50----
Protein Sequence
MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHHHHHHHccHHEEEEEEEEc
Coil and Loop (DISEMBL)
MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Flexible Loop (DISEMBL)
MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Low Complexity Region (SEG)
MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Disordered region (IsUnstruct)
****TFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV*
Disordered Region (DISOPRED)
***ETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Disordered Region (DISEMBL)
MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Disordered Region (DISPRO)
*GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	54	2.2.26 [Sep-21-2011]
Q9ARD5	54	Low temperature-induced p	N/A	no	1.0	1.0	0.833	5e-18
P68179	54	Low temperature-induced p	N/A	no	0.981	0.981	0.867	8e-18
P68178	54	Salt stress-induced hydro	N/A	no	0.981	0.981	0.867	8e-18
Q9ZNQ7	54	Hydrophobic protein RCI2A	no	no	0.962	0.962	0.788	3e-17
Q9ZNS6	54	Hydrophobic protein RCI2B	no	no	0.981	0.981	0.641	5e-15
Q9LRI7	72	Hydrophobic protein OSR8	no	no	0.925	0.694	0.745	4e-14
Q0DKW8	55	Hydrophobic protein LTI6B	no	no	0.962	0.945	0.653	9e-14
A2Y075	55	Hydrophobic protein LTI6B	N/A	no	0.962	0.945	0.653	9e-14
Q8H5T6	56	Hydrophobic protein LTI6A	no	no	0.962	0.928	0.615	2e-13
Q9FE70	52	UPF0057 membrane protein	no	no	0.925	0.961	0.730	3e-13

>sp|Q9ARD5|LT02_HORVU Low temperature-induced protein lt101.2 OS=Hordeum vulgare GN=LT101.2 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          M S TF+EVILAI+LPPVGVFLRYG  VEFWICLLLT+LGYIPGIIYA+YVLV 
Sbjct: 1  MASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLVA 54

Hordeum vulgare (taxid: 4513)

>sp|P68179|LT01_HORVU Low temperature-induced protein lt101.1 OS=Hordeum vulgare GN=LT101.1 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 49/53 (92%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
          MGS T LEVILAI+LPPVGVFLRY  GVEFWICLLLT+LGYIPGIIYA+YVLV
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

Hordeum vulgare (taxid: 4513)

>sp|P68178|ESI3_LOPEL Salt stress-induced hydrophobic peptide ESI3 OS=Lophopyrum elongatum GN=ESI3 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 49/53 (92%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
          MGS T LEVILAI+LPPVGVFLRY  GVEFWICLLLT+LGYIPGIIYA+YVLV
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

Lophopyrum elongatum (taxid: 4588)

>sp|Q9ZNQ7|RCI2A_ARATH Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/52 (78%), Positives = 50/52 (96%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
          M + TF+++I+AILLPP+GVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Sbjct: 1  MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZNS6|RCI2B_ARATH Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2 SV=1

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 48/53 (90%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
          M + TF+E+ILAI+LPP+GVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++ 
Sbjct: 1  MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIIT 53

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRI7|OSR8_ORYSJ Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 47/51 (92%), Gaps = 1/51 (1%)

Query: 5  TFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          TFLE++LAI+LPP+GVFLR+GC  +EF ICLLLT+LGY+PGIIYA+YVLV 
Sbjct: 8  TFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVA 58

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q0DKW8|LTI6B_ORYSJ Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1

 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 45/52 (86%)

Query: 2  GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
          G+   +++++AI+LPP+GVFL++GCG EFWICLLLT LGYIPGIIYAIY + 
Sbjct: 3  GTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAIT 54

Plays a role in the regulation of membrane potential. Could mediate a proton leak.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2Y075|LTI6B_ORYSI Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2

 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 45/52 (86%)

Query: 2  GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
          G+   +++++AI+LPP+GVFL++GCG EFWICLLLT LGYIPGIIYAIY + 
Sbjct: 3  GTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAIT 54

Plays a role in the regulation of membrane potential. Could mediate a proton leak.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H5T6|LTI6A_ORYSJ Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica GN=LTI6A PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 45/52 (86%)

Query: 2  GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
           + T +++ILAI+LPP+GVF ++GCG+EFWICLLLT  GY+PGIIYA++V+ 
Sbjct: 4  STATCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVIT 55

Plays a role in the regulation of membrane potential. Could mediate a proton leak.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FE70|RC21_ARATH UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana GN=At1g57550 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 45/52 (86%), Gaps = 2/52 (3%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
          MGS  FLEV+ AI +PPVGVFLRYG G+EFW+CLLLT+  +IPG+IYAIYVL
Sbjct: 1  MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	54
18404892	54	Low temperature and salt responsive prot	1.0	1.0	0.962	6e-20
224098063	54	stress-induced hydrophobic peptide [Popu	1.0	1.0	0.944	2e-19
449451719	54	PREDICTED: hydrophobic protein RCI2A-lik	1.0	1.0	0.925	3e-19
224112947	54	stress-induced hydrophobic peptide [Popu	1.0	1.0	0.925	7e-19
225449162	54	PREDICTED: low temperature-induced prote	1.0	1.0	0.925	1e-18
356511851	54	PREDICTED: hydrophobic protein RCI2A-lik	1.0	1.0	0.944	1e-18
288902425	54	hypothetical protein POPTRDRAFT_563785 [	1.0	1.0	0.925	2e-18
242089351	54	hypothetical protein SORBIDRAFT_09g00215	1.0	1.0	0.888	4e-18
356563688	54	PREDICTED: hydrophobic protein RCI2A-lik	1.0	1.0	0.907	6e-18
195657983	54	hypothetical protein [Zea mays]	1.0	1.0	0.870	1e-17

>gi|18404892|ref|NP_565897.1| Low temperature and salt responsive protein [Arabidopsis thaliana] gi|297827479|ref|XP_002881622.1| hypothetical protein ARALYDRAFT_482911 [Arabidopsis lyrata subsp. lyrata] gi|15529214|gb|AAK97701.1| unknown protein [Arabidopsis thaliana] gi|16974383|gb|AAL31117.1| At2g38901/At2g38901 [Arabidopsis thaliana] gi|20197443|gb|AAM15078.1| Expressed protein [Arabidopsis thaliana] gi|297327461|gb|EFH57881.1| hypothetical protein ARALYDRAFT_482911 [Arabidopsis lyrata subsp. lyrata] gi|330254516|gb|AEC09610.1| Low temperature and salt responsive protein [Arabidopsis thaliana]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/54 (96%), Positives = 54/54 (100%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETFLE+ILAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Sbjct: 1  MGSETFLEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098063|ref|XP_002311114.1| stress-induced hydrophobic peptide [Populus trichocarpa] gi|222850934|gb|EEE88481.1| stress-induced hydrophobic peptide [Populus trichocarpa] gi|288902419|gb|ADC67795.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902421|gb|ADC67796.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902423|gb|ADC67797.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902427|gb|ADC67799.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902431|gb|ADC67801.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902433|gb|ADC67802.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902439|gb|ADC67805.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902441|gb|ADC67806.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902445|gb|ADC67808.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902447|gb|ADC67809.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902449|gb|ADC67810.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902451|gb|ADC67811.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902453|gb|ADC67812.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902455|gb|ADC67813.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902457|gb|ADC67814.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902459|gb|ADC67815.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902461|gb|ADC67816.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902463|gb|ADC67817.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902465|gb|ADC67818.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902467|gb|ADC67819.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902469|gb|ADC67820.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902471|gb|ADC67821.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902473|gb|ADC67822.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902475|gb|ADC67823.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902477|gb|ADC67824.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902479|gb|ADC67825.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902483|gb|ADC67827.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902485|gb|ADC67828.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902487|gb|ADC67829.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902489|gb|ADC67830.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902491|gb|ADC67831.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902493|gb|ADC67832.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902495|gb|ADC67833.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902497|gb|ADC67834.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902499|gb|ADC67835.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902501|gb|ADC67836.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902503|gb|ADC67837.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902505|gb|ADC67838.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902507|gb|ADC67839.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902509|gb|ADC67840.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902511|gb|ADC67841.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902513|gb|ADC67842.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902515|gb|ADC67843.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902517|gb|ADC67844.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902519|gb|ADC67845.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902521|gb|ADC67846.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902523|gb|ADC67847.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902525|gb|ADC67848.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902527|gb|ADC67849.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902529|gb|ADC67850.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902531|gb|ADC67851.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902533|gb|ADC67852.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902535|gb|ADC67853.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902537|gb|ADC67854.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902539|gb|ADC67855.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902541|gb|ADC67856.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902543|gb|ADC67857.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902545|gb|ADC67858.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902547|gb|ADC67859.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902549|gb|ADC67860.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902551|gb|ADC67861.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902553|gb|ADC67862.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902555|gb|ADC67863.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902557|gb|ADC67864.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902559|gb|ADC67865.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902561|gb|ADC67866.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902563|gb|ADC67867.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902565|gb|ADC67868.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902567|gb|ADC67869.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902569|gb|ADC67870.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902571|gb|ADC67871.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902573|gb|ADC67872.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902577|gb|ADC67874.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902579|gb|ADC67875.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902581|gb|ADC67876.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902583|gb|ADC67877.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902585|gb|ADC67878.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902587|gb|ADC67879.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902589|gb|ADC67880.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902591|gb|ADC67881.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902593|gb|ADC67882.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902595|gb|ADC67883.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902597|gb|ADC67884.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902599|gb|ADC67885.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902601|gb|ADC67886.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/54 (94%), Positives = 54/54 (100%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETFLEVILAI+LPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYA+YVLVG
Sbjct: 1  MGSETFLEVILAIILPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYALYVLVG 54

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451719|ref|XP_004143609.1| PREDICTED: hydrophobic protein RCI2A-like [Cucumis sativus] gi|449529104|ref|XP_004171541.1| PREDICTED: hydrophobic protein RCI2A-like [Cucumis sativus]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/54 (92%), Positives = 54/54 (100%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETF+E+ILAILLPP+GVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Sbjct: 1  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112947|ref|XP_002316342.1| stress-induced hydrophobic peptide [Populus trichocarpa] gi|222865382|gb|EEF02513.1| stress-induced hydrophobic peptide [Populus trichocarpa]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 50/54 (92%), Positives = 53/54 (98%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGS TFLEVILAI+LPPVGVFLRYGCGVEFWICLLLT+LGY+PGIIYAIYVLVG
Sbjct: 1  MGSATFLEVILAIILPPVGVFLRYGCGVEFWICLLLTILGYLPGIIYAIYVLVG 54

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449162|ref|XP_002278351.1| PREDICTED: low temperature-induced protein lt101.2 [Vitis vinifera]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/54 (92%), Positives = 53/54 (98%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETFLE+ILAILLPPVGVFLRYGCG+EFWI LLLT+LGYIPGIIYAIYVLVG
Sbjct: 1  MGSETFLEIILAILLPPVGVFLRYGCGIEFWIDLLLTILGYIPGIIYAIYVLVG 54

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511851|ref|XP_003524635.1| PREDICTED: hydrophobic protein RCI2A-like [Glycine max]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/54 (94%), Positives = 53/54 (98%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETFLEVILAILLPPVGVFLRYGCGVEFWI L+LT+LGYIPGIIYAIYVLVG
Sbjct: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWIDLVLTILGYIPGIIYAIYVLVG 54

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|288902425|gb|ADC67798.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902429|gb|ADC67800.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902435|gb|ADC67803.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902437|gb|ADC67804.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902443|gb|ADC67807.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902481|gb|ADC67826.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera] gi|288902575|gb|ADC67873.1| hypothetical protein POPTRDRAFT_563785 [Populus balsamifera]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/54 (92%), Positives = 53/54 (98%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETFLEVILAI+LPPVGVFLRYGCGVEF ICLLLT+LGYIPGIIYA+YVLVG
Sbjct: 1  MGSETFLEVILAIILPPVGVFLRYGCGVEFXICLLLTILGYIPGIIYALYVLVG 54

Source: Populus balsamifera

Species: Populus balsamifera

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242089351|ref|XP_002440508.1| hypothetical protein SORBIDRAFT_09g002150 [Sorghum bicolor] gi|241945793|gb|EES18938.1| hypothetical protein SORBIDRAFT_09g002150 [Sorghum bicolor]

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/54 (88%), Positives = 52/54 (96%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETFLE++LAILLPPVGVFLRYG GVEFWICLLLT+LGYIPGIIYA+YVLV 
Sbjct: 1  MGSETFLEILLAILLPPVGVFLRYGIGVEFWICLLLTILGYIPGIIYAVYVLVA 54

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563688|ref|XP_003550093.1| PREDICTED: hydrophobic protein RCI2A-like [Glycine max]

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 49/54 (90%), Positives = 52/54 (96%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETFLEVILAILLPPVGVFLRYGCGVE WI L+LT+LGYIPGIIYAIYVL+G
Sbjct: 1  MGSETFLEVILAILLPPVGVFLRYGCGVELWIDLVLTILGYIPGIIYAIYVLIG 54

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195657983|gb|ACG48459.1| hypothetical protein [Zea mays]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 52/54 (96%)

Query: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
          MGSETF+E++LAILLPPVGVFLRYG GVEFWICLLLT+LGYIPGIIYA+YVLV 
Sbjct: 1  MGSETFVEILLAILLPPVGVFLRYGIGVEFWICLLLTILGYIPGIIYAVYVLVA 54

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	54
TAIR|locus:505006307	54	AT2G38905 "AT2G38905" [Arabido	1.0	1.0	0.962	2e-24
TAIR|locus:2074509	54	RCI2A "AT3G05880" [Arabidopsis	0.962	0.962	0.788	1.2e-19
TAIR|locus:2074419	54	RCI2B "RARE-COLD-INDUCIBLE 2B"	0.962	0.962	0.653	1.6e-17
TAIR|locus:2027518	52	AT1G57550 "AT1G57550" [Arabido	0.925	0.961	0.730	1.8e-16
UNIPROTKB|Q8H5T6	56	LTI6A "Hydrophobic protein LTI	0.888	0.857	0.666	3.7e-16
TAIR|locus:2118741	73	AT4G30650 "AT4G30650" [Arabido	0.925	0.684	0.686	2.3e-14
TAIR|locus:2131964	74	AT4G30660 "AT4G30660" [Arabido	0.925	0.675	0.686	7.9e-14
TAIR|locus:2061501	75	AT2G24040 [Arabidopsis thalian	0.907	0.653	0.68	2.1e-13
TAIR|locus:1006230338	77	AT4G28088 "AT4G28088" [Arabido	0.962	0.675	0.603	2.1e-13
UNIPROTKB|Q88A86	53	PSPTO_0507 "Uncharacterized pr	0.870	0.886	0.617	6.4e-12

TAIR|locus:505006307 AT2G38905 "AT2G38905" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 52/54 (96%), Positives = 54/54 (100%)

Query:     1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
             MGSETFLE+ILAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Sbjct:     1 MGSETFLEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

GO:0009409 "response to cold" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=ISS

TAIR|locus:2074509 RCI2A "AT3G05880" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 41/52 (78%), Positives = 50/52 (96%)

Query:     1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
             M + TF+++I+AILLPP+GVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Sbjct:     1 MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0042538 "hyperosmotic salinity response" evidence=IGI;TAS

GO:0009737 "response to abscisic acid stimulus" evidence=TAS

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0009409 "response to cold" evidence=TAS

TAIR|locus:2074419 RCI2B "RARE-COLD-INDUCIBLE 2B" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 34/52 (65%), Positives = 48/52 (92%)

Query:     1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
             M + TF+E+ILAI+LPP+GVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Sbjct:     1 MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYII 52

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0009409 "response to cold" evidence=IMP

TAIR|locus:2027518 AT1G57550 "AT1G57550" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 38/52 (73%), Positives = 45/52 (86%)

Query:     1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
             MGS  FLEV+ AI +PPVGVFLRYG G+EFW+CLLLT+  +IPG+IYAIYVL
Sbjct:     1 MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50

GO:0009409 "response to cold" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=ISS

UNIPROTKB|Q8H5T6 LTI6A "Hydrophobic protein LTI6A" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 32/48 (66%), Positives = 44/48 (91%)

Query:     5 TFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
             T +++ILAI+LPP+GVF ++GCG+EFWICLLLT  GY+PGIIYA++V+
Sbjct:     7 TCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVI 54

GO:0005886 "plasma membrane" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

TAIR|locus:2118741 AT4G30650 "AT4G30650" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 35/51 (68%), Positives = 44/51 (86%)

Query:     4 ETFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLV 53
             E F E+++AILLPP+GV L+ GC  VEF ICL+LT+LGYIPGIIYA+YV+V
Sbjct:     6 EVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56

GO:0009409 "response to cold" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=ISS

GO:0050832 "defense response to fungus" evidence=IEP

TAIR|locus:2131964 AT4G30660 "AT4G30660" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)

Query:     4 ETFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLV 53
             E   E+I+AILLPP+GV  R GC  VEF ICL+LT+LGY+PGIIYAIYV+V
Sbjct:     6 EILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIV 56

GO:0009409 "response to cold" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=ISS

GO:0006333 "chromatin assembly or disassembly" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2061501 AT2G24040 [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 34/50 (68%), Positives = 41/50 (82%)

Query:     4 ETFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVL 52
             E   E+ +AILLPPVGV LR+GC  VEF+ICL+LT LGY+PGIIYAIY +
Sbjct:     6 ELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55

GO:0005576 "extracellular region" evidence=ISM

GO:0009409 "response to cold" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=ISS

TAIR|locus:1006230338 AT4G28088 "AT4G28088" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 32/53 (60%), Positives = 43/53 (81%)

Query:     2 GSETFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLV 53
             G E   E+++AIL+PP+GV LR+GC   EF ICL+LT+LGY+PGIIYA+Y +V
Sbjct:     4 GCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIV 56

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q88A86 PSPTO_0507 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 29/47 (61%), Positives = 39/47 (82%)

Query:     7 LEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
             + +I AILLPPVGVF++ G    FW+ +LLT+LGYIPGII+AIY++V
Sbjct:     4 IRIIFAILLPPVGVFMQVGFAGAFWLNILLTLLGYIPGIIHAIYIIV 50

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0CS19	PMP3_CRYNB	No assigned EC number	0.5882	0.9259	0.8771	N/A	no
P0CS18	PMP3_CRYNJ	No assigned EC number	0.5882	0.9259	0.8771	yes	no
Q9FE70	RC21_ARATH	No assigned EC number	0.7307	0.9259	0.9615	no	no
Q9ARD5	LT02_HORVU	No assigned EC number	0.8333	1.0	1.0	N/A	no
P74805	Y1169_SYNY3	No assigned EC number	0.5869	0.8333	0.8333	N/A	no
Q75C38	PMP3_ASHGO	No assigned EC number	0.5	0.9629	0.9454	yes	no
Q6BVN0	PMP3_DEBHA	No assigned EC number	0.6410	0.7222	0.6842	yes	no
Q22700	YCU3_CAEEL	No assigned EC number	0.6170	0.8703	0.8245	yes	no
P68178	ESI3_LOPEL	No assigned EC number	0.8679	0.9814	0.9814	N/A	no
P68179	LT01_HORVU	No assigned EC number	0.8679	0.9814	0.9814	N/A	no
Q9Y068	RIC1_PHYIN	No assigned EC number	0.5217	0.8518	0.8070	N/A	no
P87284	PMP3_YEAST	No assigned EC number	0.4117	0.9444	0.9272	yes	no
P0AE44	YQAE_ECO57	No assigned EC number	0.5217	0.8518	0.8846	N/A	no
A2Y075	LTI6B_ORYSI	No assigned EC number	0.6538	0.9629	0.9454	N/A	no
P0AE42	YQAE_ECOLI	No assigned EC number	0.5217	0.8518	0.8846	N/A	no
P0AE43	YQAE_ECOL6	No assigned EC number	0.5217	0.8518	0.8846	yes	no
Q9C1W4	PMP3_SCHPO	No assigned EC number	0.5576	0.9444	0.8947	yes	no
Q4WYA5	PMP3_ASPFU	No assigned EC number	0.48	0.9259	0.8771	yes	no
Q9I5W9	Y567_PSEAE	No assigned EC number	0.5789	0.7037	0.7307	yes	no
Q9ZNQ7	RCI2A_ARATH	No assigned EC number	0.7884	0.9629	0.9629	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.4__1971__AT2G38905.1 annotation not avaliable (54 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	54
pfam01679	51	pfam01679, Pmp3, Proteolipid membrane potential mo	1e-14
COG0401	56	COG0401, COG0401, Uncharacterized homolog of Blt10	5e-09

>gnl|CDD|201919 pfam01679, Pmp3, Proteolipid membrane potential modulator

 Score = 59.7 bits (146), Expect = 1e-14
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query: 5  TFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
            L +ILAI LPP+ VFL+ GCG +F I +LLT+LGYIPGII+A+Y+++
Sbjct: 2  DILLIILAIFLPPLAVFLKRGCGKDFLINILLTLLGYIPGIIHALYIIL 50

Pmp3 is an evolutionarily conserved proteolipid in the plasma membrane which, in S. pombe, is transcriptionally regulated by the Spc1 stress MAPK (mitogen-activated protein kinases) pathway. It functions to modulate the membrane potential, particularly to resist high cellular cation concentration. In eukaryotic organisms, stress-activated mitogen-activated protein kinases play crucial roles in transmitting environmental signals that will regulate gene expression for allowing the cell to adapt to cellular stress. Pmp3-like proteins are highly conserved in bacteria, yeast, nematode and plants. Length = 51

>gnl|CDD|223478 COG0401, COG0401, Uncharacterized homolog of Blt101 [Function unknown]

 Score = 46.1 bits (110), Expect = 5e-09
 Identities = 30/47 (63%), Positives = 39/47 (82%), Gaps = 1/47 (2%)

Query: 6  FLEVILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYV 51
          F+ ++LAI LPP+GVFLR G  G +F I +LLT+LGYIPGII+A+YV
Sbjct: 6  FIRIVLAIFLPPLGVFLRRGFGGKDFLINILLTLLGYIPGIIHALYV 52

Length = 56

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	54
COG0401	56	Uncharacterized homolog of Blt101 [Function unknow	99.95
PF01679	51	Pmp3: Proteolipid membrane potential modulator; In	99.92
KOG1773	63	consensus Stress responsive protein [General funct	99.92
PF14373	43	Imm_superinfect: Superinfection immunity protein	90.32

>COG0401 Uncharacterized homolog of Blt101 [Function unknown]

Probab=99.95  E-value=4.6e-28  Score=136.51  Aligned_cols=54  Identities=57%  Similarity=1.054  Sum_probs=51.9

Q ss_pred             CChHHHHHHHHHHhcchhhhhhHhc-cchHHHHHHHHHHHHhhhhhhhhhhheeC
Q 038161            1 MGSETFLEVILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYVLVG   54 (54)
Q Consensus         1 M~~~~~~~~ilai~lPPlaV~~~~G-~~~~~~in~lLtllg~~Pg~ihA~yii~~   54 (54)
                      |+.+|+.++++|+|+||++|++++| |++|+++|++||++||+||+|||+|+++|
T Consensus         1 ~~~~d~~~iilaiflPP~~VfL~~G~~~~df~iNiLLtlLg~~PGiiHA~yvi~~   55 (56)
T COG0401           1 MTLMDFIRIVLAIFLPPLGVFLRRGFGGKDFLINILLTLLGYIPGIIHALYVILR   55 (56)
T ss_pred             CcHHHHHHHHHHHHcCchhhhhhccCCcHHHHHHHHHHHHHhhhhhHhheEEEEe
Confidence            7889999999999999999999999 57999999999999999999999999986

>PF01679 Pmp3: Proteolipid membrane potential modulator; InterPro: IPR000612 Proteolipid membrane potential modulator is an evolutionarily conserved proteolipid in the plasma membrane which, in S

Probab=99.92  E-value=5.6e-26  Score=125.48  Aligned_cols=51  Identities=57%  Similarity=1.111  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHhcchhhhhhHhccchHHHHHHHHHHHHhhhhhhhhhhheeC
Q 038161            4 ETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG   54 (54)
Q Consensus         4 ~~~~~~ilai~lPPlaV~~~~G~~~~~~in~lLtllg~~Pg~ihA~yii~~   54 (54)
                      +|++++++|+++||+||++++||++|+++|++||++||+||++||+|+++|
T Consensus         1 ~~~~~~ilai~lPPlaV~~~~g~~~~~~inl~Ltl~g~iPg~ihA~y~i~~   51 (51)
T PF01679_consen    1 MDILLIILAIFLPPLAVFLKKGCSKDFWINLLLTLLGWIPGVIHALYVIYK   51 (51)
T ss_pred             CcHHHHHHHHHcccHHHHHHcCCchhhHHHHHHHHHHHHHHHHHeeEEEeC
Confidence            368999999999999999999999999999999999999999999999876

pombe, is transcriptionally regulated by the Spc1 stress MAPK (mitogen-activated protein kinases) pathway. It functions to modulate the membrane potential, particularly to resist high cellular cation concentration. In eukaryotic organisms, stress-activated mitogen-activated protein kinases play crucial roles in transmitting environmental signals that will regulate gene expression for allowing the cell to adapt to cellular stress. Pmp3-like proteins are highly conserved in bacteria, yeast, nematode and plants. Proteins in this entry include the PMP3 as well as several other proteins that have been shown [] to be evolutionary related. These are small proteins of from 52 to 140 amino-acid resiudes that contain two transmembrane domains and belong to the UPF0057 (PMP3) protein family.; GO: 0016021 integral to membrane

>KOG1773 consensus Stress responsive protein [General function prediction only]

Probab=99.92  E-value=4.3e-26  Score=131.03  Aligned_cols=54  Identities=54%  Similarity=0.970  Sum_probs=50.7

Q ss_pred             CChHHHHHHHHHHhcchhhhhhHhc-cchHHHHHHHHHHHHhhhhhhhhhhheeC
Q 038161            1 MGSETFLEVILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYVLVG   54 (54)
Q Consensus         1 M~~~~~~~~ilai~lPPlaV~~~~G-~~~~~~in~lLtllg~~Pg~ihA~yii~~   54 (54)
                      ++.+|+.++++|+++||+||++++| |++|++||++||++||+||+|||+|++.+
T Consensus         3 ~~~~~~~~iilai~lPP~aV~l~~g~C~~~~~InilL~~L~~iPgiIhA~yii~~   57 (63)
T KOG1773|consen    3 TDCDDILLIILAIFLPPLAVFLRRGGCTVDVLINILLTLLGFIPGIIHAIYIIFF   57 (63)
T ss_pred             CcHHHHHHHHHHHHcCchheeeecCCCchhhHHHHHHHHHHHhHHHHhhEEEEEE
Confidence            3568999999999999999999998 99999999999999999999999999763

>PF14373 Imm_superinfect: Superinfection immunity protein

Probab=90.32  E-value=0.57  Score=24.93  Aligned_cols=33  Identities=30%  Similarity=0.499  Sum_probs=24.6

Q ss_pred             hhhhhhHhc---cchHHHHHHHH--HHHHhhhhhhhhh
Q 038161           17 PVGVFLRYG---CGVEFWICLLL--TVLGYIPGIIYAI   49 (54)
Q Consensus        17 PlaV~~~~G---~~~~~~in~lL--tllg~~Pg~ihA~   49 (54)
                      |-.+..+++   ...-+.+|+.|  |.+||+-+.+.|+
T Consensus         5 P~iiA~~r~~~~~~~I~~~Nl~lGWT~iGWv~aLiwA~   42 (43)
T PF14373_consen    5 PSIIAFRRKHPNKWAIFLLNLLLGWTGIGWVAALIWAL   42 (43)
T ss_pred             hHHHHHHcCCCcchhhHhHHHHHHhHHHHHHHHHHHhc
Confidence            444455554   34568999999  9999999998885

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00