Citrus Sinensis ID: 038235

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510----
Protein Sequence
MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRGSSPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHcccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcccccccccHHHHccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHHHcccccccccccccccccccccEccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccHHHHHHHHcccccEEEEccccccccccccccccHHHHHccccccHccccccHHcccHHHccccccccccccccccccccccccccccEEcccccccccccccccEEcccccccccEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mllspgnsprhlaspspspsqssfpesyltnvnnsasatqkvppkkrakvldedTYVSAIESIierdyfpdlskLRDRYEWLqatrtgdpvQIRDAQLKIMERRGKKVIslnsdgkirtqtetpgstfarnftpfdefdvnittpkvgvelsgegvcrdgtdevDVSMRLDEFLRkhtsedndSFSKILEKVNRKRKERYQFLLEGekrdnnnliedvkkdritdgygtsyqppstlegWKYTAKNLlmyhpadcgeapltEEEQAVRLKGLTKEINKtntrfhgkimdsrpnddgtvevlytpvagttpgpvfdrdgdkmkkydledmrktpnrfyvesgkkaengysfvktpspapgadespfitwgeiegtplrletedtpidiggsgdgphfkipsaptrdvMAHELSREASRKLKERskmfqkpplpspyragsaspsgkllsPAAQKFMRNAMAKSSSSVDDALRasyrgsspvtgtpkggrsvsrlgrdvslssrspsvregsnppw
Flexible Loop (DISEMBL)
mllspgnsprhlaspspspsqSSFPESYLTNVNnsasatqkvppkkrakvldedtyvsaiesiierdyfpdlsKLRDRYEWlqatrtgdpvqiRDAQLKIMERrgkkvislnsdgkirtqtetpgstfarnftpfdefdvnITTPkvgvelsgegvcrdgtdEVDVSMRLDEFlrkhtsedndsfskilekvnRKRKERYQFllegekrdnnnliedvkkdritdgygtsyqppstleGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKgltkeinktntrfhgkimdsrpnddgTVEVLYtpvagttpgpvfdrdgDKMKkydledmrktpnrfYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPidiggsgdgphFKIPSAPTRDVMAHELSREASRklkerskmfqkpplpspyragsaspsGKLLSPAAQKFMRNAMAKSSSSVDDALRAsyrgsspvtgtpkggrsvsrlgrdvslssrspsvregsnppw
Low Complexity Region (SEG)
MLLSPGNSPRHLAspspspsqssfpesYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRGSSPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW
Disordered region (IsUnstruct)
**************************************************LDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIM**************************FARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDV**********************************QFLL**********I**V**DRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAP*********L**L************************TVEVLYTPVAG*********************************************************FITWGEIEG*********************************************************************************************************************************************
Disordered Region (DISOPRED)
*****************************************************DTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTG*********************************************************************************LDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLL***********************************WKYTAKNLLMYHPA**********************************************************************************************YSFVKTPSP*********ITWGEIEGTP*******************************************************************************************************************************************
Disordered Region (DISEMBL)
*************************ESYLTNVNN***************VLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKP***************KLLSPAAQKFMR************ALRASYRGS*************************************
Disordered Region (DISPRO)
**********************************************RAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMER***************************************************************SMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKI*********************************************************ENGYS*VKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSK******************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRGSSPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	514	2.2.26 [Sep-21-2011]
O70279	479	Protein DGCR14 OS=Mus mus	yes	no	0.750	0.805	0.302	3e-32
Q96DF8	476	Protein DGCR14 OS=Homo sa	yes	no	0.735	0.794	0.295	8e-32
O44424	501	Protein DGCR14 homolog OS	yes	no	0.714	0.732	0.296	9e-31
P34420	531	ES2 similar protein 2 OS=	yes	no	0.717	0.694	0.273	1e-28
O59793	384	Stress response protein b	yes	no	0.336	0.450	0.231	1e-06

>sp|O70279|DGC14_MOUSE Protein DGCR14 OS=Mus musculus GN=Dgcr14 PE=2 SV=2

 Score =  140 bits (352), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 214/460 (46%), Gaps = 74/460 (16%)

Query: 45  KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERR 104
           + R +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  ++R   +K     
Sbjct: 35  RSRQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFG--- 91

Query: 105 GKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEV 164
                  ++ GKI  +   P  T A   TP    +V+  +  +G +   +G  RD  D  
Sbjct: 92  -------SALGKISREPPPPYVTPATFETP----EVHPGSAVLGNKPRPQG--RDLDDGE 138

Query: 165 DVSMR-------LDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEG----EKRDNNN 213
                       LD FL ++TSEDN SF +I+E    K   R+ +L +     EKR  +N
Sbjct: 139 AGEEEEKEPLPSLDVFLSQYTSEDNASFQEIMEVAKEKSHARHAWLYQAEEEFEKRQKDN 198

Query: 214 L-IEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGL 272
           L +   +   I           + +E WKY AKN LMY+P       + +EEQ  +    
Sbjct: 199 LELPSAEHQAIESSQ-------AGVETWKYKAKNSLMYYPEG-----VPDEEQLFK---K 243

Query: 273 TKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKT 332
            ++I   NTRF   + D  P             A         + G   K+   ++  + 
Sbjct: 244 PRQIVHKNTRF---LRD--PFSQALSRSQLQQAAALNAQHKQGKVGPDGKELIPQESPRV 298

Query: 333 PNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTP-IDIGGSG 391
                         G+ FV TPSPAPG +ESP +TWGE+E TPLR+E  ++P +D     
Sbjct: 299 -------------GGFGFVATPSPAPGVNESPLMTWGEVENTPLRVEGSESPYVD---RT 342

Query: 392 DGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAA 451
            GP FKI     R+ +  +++ EA+   K R+K  Q+          S +P G  LSPA 
Sbjct: 343 PGPTFKILEPGRRERLGLKMANEAA--AKNRAKK-QEALRRVTENLASLTPKG--LSPAM 397

Query: 452 QKFMRNAMAKSSSS-VDDALRASYRGS---SPVTGTPKGG 487
              ++  +++++S   D ALRASY  S   S    TP GG
Sbjct: 398 SPALQRLVSRTASKYTDRALRASYTPSPARSSHLKTPAGG 437

May be involved in pre-mRNA splicing.
Mus musculus (taxid: 10090)

>sp|Q96DF8|DGC14_HUMAN Protein DGCR14 OS=Homo sapiens GN=DGCR14 PE=1 SV=1

 Score =  138 bits (348), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 212/454 (46%), Gaps = 76/454 (16%)

Query: 43  PPKKR-----------AKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPV 91
           PP+KR            +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  
Sbjct: 19  PPRKREAGEAGAATSKQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLE 78

Query: 92  QIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVEL 151
           ++R   +K            ++ GK+  +   P  T A   TP    +V+  T  VG + 
Sbjct: 79  RMRQIAIKFG----------SALGKMSREPPPPYVTPATFETP----EVHAGTGVVGNKP 124

Query: 152 SGEGVCRDGTDEVDVSMR-----LDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEG 206
              G   +  +  +   +     LD FL ++TSEDN SF +I+E    + + R+ +L + 
Sbjct: 125 RPRGRGLEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQA 184

Query: 207 ----EKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTE 262
               EKR  +NL     + +  +    S      +E WKY AKN LMY+P       + +
Sbjct: 185 EEEFEKRQKDNLELPSAEHQAIESSQAS------VETWKYKAKNSLMYYPEG-----VPD 233

Query: 263 EEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMK 322
           EEQ   L    +++   NTRF   + D  P             A         + G   K
Sbjct: 234 EEQ---LFKKPRQVVHKNTRF---LRD--PFSQALSRCQLQQAAALNAQHKQGKVGPDGK 285

Query: 323 KYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETED 382
           +   ++  +               G+ FV TPSPAPG +ESP +TWGE+E TPLR+E  +
Sbjct: 286 ELIPQESPRV-------------GGFGFVATPSPAPGVNESPMMTWGEVENTPLRVEGSE 332

Query: 383 TP-IDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRAGSAS 441
           TP +D      GP FKI     R+ +  +++ EA+   K R+K  Q+          S +
Sbjct: 333 TPYVD---RTPGPAFKILEPGRRERLGLKMANEAA--AKNRAKK-QEALRRVTENLASLT 386

Query: 442 PSGKLLSPAAQKFMRNAMAKSSSS-VDDALRASY 474
           P G  LSPA    ++  +++++S   D ALRASY
Sbjct: 387 PKG--LSPAMSPALQRLVSRTASKYTDRALRASY 418

May be involved in pre-mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|O44424|DGC14_DROME Protein DGCR14 homolog OS=Drosophila melanogaster GN=Es2 PE=1 SV=2

 Score =  135 bits (339), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 199/448 (44%), Gaps = 81/448 (18%)

Query: 29  LTNVNNSASATQKVPP-----KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQ 83
           +  V NSA A  K P      K + K+L E+ Y+  +  II+RD+FPDL +LR + ++L 
Sbjct: 24  VARVQNSALAEFKKPTAMVRHKNKPKILTEEKYIEEMSKIIQRDFFPDLERLRAQNDYLD 83

Query: 84  ATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNIT 143
           A    D VQ+ +    I ER     IS       R       +TF    TP  +   +  
Sbjct: 84  AESRRDFVQMAE----IRERYSLGRISGTGRSTSRRNNAMSPATFE---TPVSQAKCS-N 135

Query: 144 TPKVGVELSGEGVCRDGTDEVDVSMR-------LDEFLRKHTSEDNDSFSKILEKVNRKR 196
           TP      +      DG+++ D   R       LD FL+K+TSEDN SF +I+E    K 
Sbjct: 136 TPLPNSRATDTPFSTDGSEKSDAEGRDTTAKLSLDAFLQKYTSEDNQSFQEIIETAEAKL 195

Query: 197 KERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTL---EGWKYTAKNLLMYHPA 253
           +++Y  L   EK       E +++  +     T ++ P  L   E W YT  N +MY P 
Sbjct: 196 RQKYAVLYNHEKLS----AEQLQRALMLPSIETQFEEPDPLRKIETWNYTNMNSIMYVP- 250

Query: 254 DCGEAPLTEEEQAVRLKGLTKEINKTNTRF----HGKIMDSRPNDDGTVEVLYTPVAGTT 309
           D  E   TEEE+ V+L    + I    TR       + MD++  +D   EV      G T
Sbjct: 251 DGVE--YTEEER-VQLAERKQSIQHNATRLPDEAKHREMDTKKLND---EVPQNGAGGAT 304

Query: 310 PGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWG 369
             P       K++ +DL                        +++PSP PG   SP +TWG
Sbjct: 305 ATP-------KVRGFDL------------------------LRSPSPRPGEAFSPIMTWG 333

Query: 370 EIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMF--- 426
           EI+GTP RL+  DTP+       GP F+I     R+ +A  L+   S +++ + +M    
Sbjct: 334 EIDGTPFRLDGGDTPLR---PTQGPSFRINENSRRENIAIALAERVSERMRNQKQMALDT 390

Query: 427 QKPPLPSPY------RAGSASPSGKLLS 448
            +  + SP       R  S SP+ +LL+
Sbjct: 391 ARRNIGSPLIRTNMERLASMSPAAQLLA 418

Drosophila melanogaster (taxid: 7227)

>sp|P34420|DGC14_CAEEL ES2 similar protein 2 OS=Caenorhabditis elegans GN=ess-2 PE=3 SV=2

 Score =  128 bits (321), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 192/435 (44%), Gaps = 66/435 (15%)

Query: 49  KVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKV 108
           +V+ E+ Y++ ++ IIE+DYFP L K++ + E+L+A    D  +I++ Q+K         
Sbjct: 40  QVVPEEKYIAGLDKIIEKDYFPHLKKMQAQKEYLEAVANKDINKIKELQMKFCS-----T 94

Query: 109 ISLNSDGKIRTQTETPGSTFARNFTPFD------------EFDVNITTPKVGVELSGEGV 156
            S+ +D   RT   T  +T A + + FD                 + +P       G+  
Sbjct: 95  GSVRTDRSFRTPITTRSTTEAPDVSSFDADTPGPSSASTSSAHDWMQSPMPFANEEGDNE 154

Query: 157 CRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKE-RYQFLLEGEKRDNNNLI 215
             +   +      L  +L K+TSEDN SF + L KV R+R++ R  ++ + E+  N NL+
Sbjct: 155 ALNRKRKKKKEETLTSYLNKYTSEDNASFEE-LAKVMREREDARRPWVYKAEEEHNKNLV 213

Query: 216 --------EDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAV 267
                    DV+   +          P  ++ W Y A N ++++P     A LT  E A 
Sbjct: 214 TRQAIAAEADVQL-ALKHAVDADDNRPLNVDNWAYKAWNTVLFNP---DGAALTPAEIAD 269

Query: 268 RLKGLTKEINKTNTRF--HGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYD 325
             +    EINK  TRF   GK+   +P+D+       +                   K D
Sbjct: 270 AARKQQTEINKRGTRFPDSGKL---KPSDEAMTRAAVSHALANA------------GKVD 314

Query: 326 LEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPI 385
                 TP            N +  ++TP+P P   +SP +TWGEI+GTP RL+  D   
Sbjct: 315 FLGNEVTP-----------ANSFKLLETPNPNPDDMDSPLMTWGEIDGTPFRLDAPDV-T 362

Query: 386 DIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRA----GSAS 441
           +    G  P FKIP  P R+ +A  ++   + K +++ K+  +    + +      GS  
Sbjct: 363 EHSLPGAAPVFKIPEVPYREKIAQSMNDSIAAKYRDKRKVAMRAAEGAHFSRTPGFGSKR 422

Query: 442 PSGKL--LSPAAQKF 454
            S KL  LSPAAQK 
Sbjct: 423 VSDKLAQLSPAAQKL 437

Caenorhabditis elegans (taxid: 6239)

>sp|O59793|BIS1_SCHPO Stress response protein bis1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bis1 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 47/220 (21%)

Query: 51  LDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVIS 110
           L+ED Y+  +  II++ YFPDL KL+      +     + V   DAQ +  + + K +I+
Sbjct: 30  LEEDDYIEGLSYIIQQQYFPDLPKLK-----AEVVLESEEVGSFDAQNESRDEKLKYLIA 84

Query: 111 LNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRL 170
            NS+  +R +  +                           L+   + +   D  +  + +
Sbjct: 85  KNSEDPLRKRLPS---------------------------LAIHEITKAQLDGENKPISV 117

Query: 171 DEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTS 230
             +  K TSEDN SF +++E  +R R E+++       +  +N I+ +       GY  S
Sbjct: 118 ASYQNKFTSEDNASFGELMEDESRLRAEQHKRRFGVHSQQPSNSIQTI-------GYSNS 170

Query: 231 YQPPS--------TLEGWKYTAKNLLMYHPADCGEAPLTE 262
               S        +++ W Y  KN LMY P     + L++
Sbjct: 171 DAIKSIAWKEKDKSIKTWNYQPKNALMYTPETNHSSSLSQ 210

Has a role in maintaining cell viability during stationary phase induced by stress response.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	514
224064854	514	predicted protein [Populus trichocarpa]	0.992	0.992	0.718	0.0
255586447	519	protein with unknown function [Ricinus c	0.994	0.984	0.726	0.0
449453592	509	PREDICTED: protein DGCR14 homolog [Cucum	0.982	0.992	0.704	0.0
356501715	500	PREDICTED: protein DGCR14 homolog [Glyci	0.966	0.994	0.697	0.0
225447600	504	PREDICTED: protein DGCR14 [Vitis vinifer	0.974	0.994	0.690	0.0
356551676	500	PREDICTED: protein DGCR14 homolog [Glyci	0.966	0.994	0.693	0.0
357495361	510	Protein DGCR14 [Medicago truncatula] gi|	0.982	0.990	0.689	0.0
15231871	508	protein DGCR14 [Arabidopsis thaliana] gi	0.906	0.917	0.683	0.0
297829338	503	hypothetical protein ARALYDRAFT_478116 [	0.906	0.926	0.689	1e-179
302121701	521	DGCR-like protein [Hypericum perforatum]	0.947	0.934	0.652	1e-178

>gi|224064854|ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1| predicted protein [Populus trichocarpa]

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/518 (71%), Positives = 433/518 (83%), Gaps = 8/518 (1%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAI 60
           MLLSPG+SPRHL+SPSP    S+   +   + N+S+     + P K   VLDEDTYV+ I
Sbjct: 1   MLLSPGHSPRHLSSPSP---YSNSENTLQISSNSSSINNTPINPSKHPTVLDEDTYVATI 57

Query: 61  ESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQ 120
           E IIERD+FPD+SKLRDR +WL+A ++GDP+QIRDAQLKIMERRGKKV + +SDG  R++
Sbjct: 58  EKIIERDFFPDISKLRDRLDWLEAMKSGDPIQIRDAQLKIMERRGKKVNNPSSDGSFRSR 117

Query: 121 --TETPGSTFARNFTPFDEFDVNITTPKVGVE--LSGEGVCRDGTDEVDVSMRLDEFLRK 176
             T+TPGSTF R+ TPFDEFD  I TP V ++  LS      +    VD ++ LDEF R+
Sbjct: 118 NRTQTPGSTFMRSLTPFDEFDSRIQTPGVVMDRGLSSNAESNENEVAVDKNLSLDEFFRR 177

Query: 177 HTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPST 236
           +TSEDNDSFSKILEKVNRKRKERY+ LLEGEK D    I D K+DRITDG+GTS QPPST
Sbjct: 178 YTSEDNDSFSKILEKVNRKRKERYEHLLEGEKEDVK-FIGDAKRDRITDGFGTSDQPPST 236

Query: 237 LEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDG 296
           LEGWKYTAKNLLMYHPAD GEAPLTEEEQAVRLKGLTKEIN+++TRFHGK++D+RP DDG
Sbjct: 237 LEGWKYTAKNLLMYHPADRGEAPLTEEEQAVRLKGLTKEINRSSTRFHGKMLDTRPRDDG 296

Query: 297 TVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSP 356
            VEVLYTPVAG TP P++DRDGDK KKYDLED+R+TP+RFYVESGKKA++GYSFV+TPSP
Sbjct: 297 VVEVLYTPVAGATPLPMYDRDGDKAKKYDLEDLRRTPDRFYVESGKKADDGYSFVRTPSP 356

Query: 357 APGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREAS 416
           APG DESPFITWGEIEGTP+RLE EDTPIDIGGSG+GPHFKIP+ P RDV AH LSREAS
Sbjct: 357 APGVDESPFITWGEIEGTPMRLEPEDTPIDIGGSGNGPHFKIPNPPARDVKAHSLSREAS 416

Query: 417 RKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRG 476
           R+L+E+SKMFQKPPLPSP R GSASPS + LSPAAQKF+RNA+++SSSSVD+ LRASYRG
Sbjct: 417 RRLREKSKMFQKPPLPSPSRGGSASPSVRTLSPAAQKFVRNAISRSSSSVDETLRASYRG 476

Query: 477 SSPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW 514
           +SP  GTPK GRS+SR GRD S+SSRSPSVRE SNPPW
Sbjct: 477 ASPGVGTPKSGRSISRFGRDGSISSRSPSVRENSNPPW 514

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586447|ref|XP_002533868.1| protein with unknown function [Ricinus communis] gi|223526190|gb|EEF28518.1| protein with unknown function [Ricinus communis]

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/522 (72%), Positives = 429/522 (82%), Gaps = 11/522 (2%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAI 60
           MLLSPG+SPRHL+SPSP PS +S  E  L   N S   T     +KRA+VLDEDTYV+AI
Sbjct: 1   MLLSPGHSPRHLSSPSPGPSTNS--EIALQTSNKSTITTTPSNHRKRARVLDEDTYVAAI 58

Query: 61  ESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDG----K 116
           E IIERD+FPD+SKLRDR +WL+A +TGDP+QIRDAQLKI+ERRGK+V S NSDG    +
Sbjct: 59  EKIIERDFFPDISKLRDRLDWLEAVKTGDPIQIRDAQLKIIERRGKRVNSSNSDGSTQTR 118

Query: 117 IRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDE----VDVSMRLDE 172
            R+QT+TPGSTF RN  PFDEFD+  +     +++ G+    D  DE    VD  + LDE
Sbjct: 119 NRSQTQTPGSTFMRNLNPFDEFDIINSNKTPRMDMFGDKEKSDNNDEADDAVDEFLSLDE 178

Query: 173 FLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQ 232
           F R++TSEDN+SFSKILEKVNRKRKE Y  LLEGEK D   LIEDVK+DRITDGYGTS Q
Sbjct: 179 FFRRYTSEDNESFSKILEKVNRKRKETYGHLLEGEKEDVK-LIEDVKRDRITDGYGTSDQ 237

Query: 233 PPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRP 292
           P STLEGW YTAKNLLMYHPAD GE  LTEEE+AVRLKGLTKEIN++NTRFHGK++DSRP
Sbjct: 238 PVSTLEGWNYTAKNLLMYHPADRGEVALTEEERAVRLKGLTKEINRSNTRFHGKMLDSRP 297

Query: 293 NDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVK 352
            DDG+VEVLYTPV G TP PV  R GDK KKYDLED+R+TPN FY+ESGKKAENGY+FV+
Sbjct: 298 KDDGSVEVLYTPVVGGTPLPVSGRHGDKAKKYDLEDLRRTPNNFYMESGKKAENGYAFVR 357

Query: 353 TPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELS 412
           TPSPAPG DESPFITWGEIEGTPLRLE+EDTPIDIGGSGDGPHFKI + P RDV AH LS
Sbjct: 358 TPSPAPGVDESPFITWGEIEGTPLRLESEDTPIDIGGSGDGPHFKILNPPARDVKAHTLS 417

Query: 413 REASRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRA 472
           REA+RKL+ERSKMFQKPPLPSP R GSASP+ + LSPAAQKFMRNA++KSSSSVD++LRA
Sbjct: 418 REAARKLRERSKMFQKPPLPSPGRGGSASPNVRTLSPAAQKFMRNAISKSSSSVDESLRA 477

Query: 473 SYRGSSPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW 514
           SYRGSSP  GTPK  RSVSR GRD S+ SRSPSVRE SNPPW
Sbjct: 478 SYRGSSPGIGTPKSVRSVSRFGRDGSMGSRSPSVREDSNPPW 519

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453592|ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus]

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/518 (70%), Positives = 417/518 (80%), Gaps = 13/518 (2%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAI 60
           MLLSPG+SPRH++SPSPS    +  E+ +  + +S+S T     +K  KVLDED+YV AI
Sbjct: 1   MLLSPGHSPRHISSPSPS----TVSENAIQTLQSSSSITTPQSSRKHPKVLDEDSYVEAI 56

Query: 61  ESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQ 120
           E IIERDYFPD+SKLRDR +WL+A ++ DP+ IRDAQLKIMERRG+KV  LN DGK    
Sbjct: 57  EKIIERDYFPDISKLRDRLDWLEAIKSADPILIRDAQLKIMERRGQKVKRLNPDGK---- 112

Query: 121 TETPGSTFARNFTPFDEFDVNI-TTPKVGVELSGEGVCRDGTD--EVDVSMRLDEFLRKH 177
           ++TPGSTF R+FTPFDEF+     TP  G           G+D   VD S+ LDEF R++
Sbjct: 113 SQTPGSTFMRSFTPFDEFEGKTPKTPGFGGSGVVGVTEEGGSDGKVVDESLSLDEFFRQY 172

Query: 178 TSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTL 237
           TSEDN SFSKILEK NRKRKERY +L EGEK D+   IEDVK+DRITDGYGTS QPPSTL
Sbjct: 173 TSEDNFSFSKILEKDNRKRKERYAYLTEGEK-DDVKSIEDVKRDRITDGYGTSDQPPSTL 231

Query: 238 EGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGT 297
           EGWKYTAKNLLMYHP+D GEAPLTEEE+AVRLKGLTKEIN+++TRFHGK+MDSRP DDG+
Sbjct: 232 EGWKYTAKNLLMYHPSDRGEAPLTEEERAVRLKGLTKEINRSSTRFHGKLMDSRPKDDGS 291

Query: 298 VEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPA 357
           VEV+Y PVAGTTP PV DRDGD++KKYDLED+RKTPN FYVESGK+AENGYSFV+TPSPA
Sbjct: 292 VEVIYAPVAGTTPHPVLDRDGDRLKKYDLEDLRKTPNPFYVESGKRAENGYSFVRTPSPA 351

Query: 358 PGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASR 417
           PG DESPFITWGEIEGTPLRL+ EDTPIDIGGS DGP + IP    RD  AH LSREA+R
Sbjct: 352 PGVDESPFITWGEIEGTPLRLDPEDTPIDIGGSVDGPRYNIPCPAARDEKAHSLSREAAR 411

Query: 418 KLKERSKMFQKPPLPSPYRAGSASPSGK-LLSPAAQKFMRNAMAKSSSSVDDALRASYRG 476
           KL+E+SKMFQKPPLPSP R GSASPS K  LSPAAQKF+RNA+AKSSSS D+ LRASYRG
Sbjct: 412 KLREKSKMFQKPPLPSPVRGGSASPSVKRTLSPAAQKFVRNAIAKSSSSFDETLRASYRG 471

Query: 477 SSPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW 514
            SP   TPK GRS+SR  RD S  SRSPSV+EGSNP W
Sbjct: 472 GSPSAATPKSGRSLSRFARDGSFGSRSPSVKEGSNPAW 509

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501715|ref|XP_003519669.1| PREDICTED: protein DGCR14 homolog [Glycine max]

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/515 (69%), Positives = 407/515 (79%), Gaps = 18/515 (3%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAI 60
           ML SPG+SP H++SPSPS SQ S       N N+  S++      K   VLDEDTYV A+
Sbjct: 1   MLQSPGHSPLHISSPSPSISQVS-----AQNPNDPPSSSCA----KHPAVLDEDTYVEAL 51

Query: 61  ESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQ 120
           E IIERDYFPD+SKLRDR +WL+A +TGDPV IR+AQLKI+ERR       N +   RT 
Sbjct: 52  EKIIERDYFPDISKLRDRLDWLEAIKTGDPVVIREAQLKILERRAGTTKVTNPNDASRTT 111

Query: 121 TETPGSTFARNFTPFDEFDVNIT-TPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKHTS 179
           + TPGSTF RNFTPFDEFD   + TP+  V  + EG   DG   VD S+ LD+F+R++TS
Sbjct: 112 SHTPGSTFVRNFTPFDEFDGKPSQTPRAPVPEAKEGENNDGG--VDTSLGLDQFMRRYTS 169

Query: 180 EDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEG 239
           EDN SFSKILEKVN+KRKER+ FL E     +   IEDVK+DRITDGYGTSYQPPSTLEG
Sbjct: 170 EDNHSFSKILEKVNKKRKERFGFLNE-----DVQGIEDVKRDRITDGYGTSYQPPSTLEG 224

Query: 240 WKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVE 299
           W YTAKNLLMYHPAD GE PLTEEE+A R+K  TKEIN+ NTRFHGK+MDSRP DDGTVE
Sbjct: 225 WNYTAKNLLMYHPADRGEVPLTEEERANRIKAATKEINRGNTRFHGKMMDSRPKDDGTVE 284

Query: 300 VLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPG 359
           VLYTPVAG TPGP+  R+GDK+KKYDLED+RKTPN FY+ESGKKAENGYSFVKTPSPAPG
Sbjct: 285 VLYTPVAGATPGPMSLREGDKLKKYDLEDLRKTPNPFYLESGKKAENGYSFVKTPSPAPG 344

Query: 360 ADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKL 419
            DESPFITWGEIEGTPLRL+ ED  +DIGGS DGPH++IPSAPTRD  AH LSREA+RK+
Sbjct: 345 VDESPFITWGEIEGTPLRLDLEDIQLDIGGSADGPHYRIPSAPTRDSKAHSLSREAARKI 404

Query: 420 KERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRGSSP 479
           +ERSKMF KPPL SP R GSASPS + LSPAAQKF+RNA AKSSSSVD+ LRASYRGS+P
Sbjct: 405 RERSKMFHKPPLASPVRGGSASPSMRTLSPAAQKFVRNAFAKSSSSVDETLRASYRGSTP 464

Query: 480 VTGTPKG-GRSVSRLGRDVSLSSRSPSVREGSNPP 513
              TP    RSVSR  RD SL+SRSPSVREGSNPP
Sbjct: 465 ALATPTSVSRSVSRFARDGSLASRSPSVREGSNPP 499

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447600|ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/517 (69%), Positives = 408/517 (78%), Gaps = 16/517 (3%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAI 60
           MLLSPG+SPRHL+S        S  E    N N+S+       P+K   VLDEDTYV+AI
Sbjct: 1   MLLSPGHSPRHLSS-----PSPSLSEKPQQNRNSSSVLNVSANPRKEVTVLDEDTYVAAI 55

Query: 61  ESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQ 120
           E I+ERD+FPD+ KLRDR EWL+A R+GDP++IRD QLKI +RRG+K  +LN     R +
Sbjct: 56  EKIVERDFFPDIPKLRDRLEWLEAVRSGDPLRIRDVQLKIRDRRGRK--ALNCAETERNR 113

Query: 121 TETPGSTFARNFTPFDEFDVNITTPKV-GVELSGEGVCRDGTDEVDVSMRLDEFLRKHTS 179
           + TPGSTF R FTPF E D    TP V   E S  G   D   E  + + LD+F R++TS
Sbjct: 114 SRTPGSTFTRTFTPF-ELD---KTPDVSNRESSVAGESADDDSEA-LPLSLDQFFRRYTS 168

Query: 180 EDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEG 239
           EDN+SFSKILEK NRKRKERY+FL EGEK D   LIEDVK+DRITDGYGTS QPPSTL+G
Sbjct: 169 EDNESFSKILEKANRKRKERYEFLTEGEKEDVK-LIEDVKRDRITDGYGTSDQPPSTLDG 227

Query: 240 WKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVE 299
           WKYTAKNLLMYHPAD GEAPLTEEE+A RL GLTKE+N TNTRFHGK+MDSRP D+ TV 
Sbjct: 228 WKYTAKNLLMYHPADRGEAPLTEEERAERLNGLTKEVNLTNTRFHGKLMDSRPKDEDTVA 287

Query: 300 VLYTPVAGTTPGPVF--DRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPA 357
           VLYTP+ G TP P+   +R+GDK KKYDLED+RKTPN FYVES K+A+NGYS+VKTPSPA
Sbjct: 288 VLYTPIPGATPVPLSLSEREGDKSKKYDLEDLRKTPNPFYVESRKRADNGYSYVKTPSPA 347

Query: 358 PGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASR 417
           PG DESPFITWGEIEGTPLRLE EDTPI IGGSGDGPHFKIP  P+RD+ AH LSREA+R
Sbjct: 348 PGVDESPFITWGEIEGTPLRLEPEDTPIGIGGSGDGPHFKIPCPPSRDLKAHSLSREAAR 407

Query: 418 KLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRGS 477
           KL+ERSKMFQKPPLPSP R GSASPS + LS AAQKF+RNA+AKSS SVD++LRASYRG+
Sbjct: 408 KLRERSKMFQKPPLPSPVRGGSASPSVRTLSHAAQKFVRNAIAKSSCSVDESLRASYRGA 467

Query: 478 SPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW 514
           SP   TPK GRS+SR GRD S S+RSPSVREGSNPPW
Sbjct: 468 SPGISTPKSGRSMSRFGRDGSTSTRSPSVREGSNPPW 504

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551676|ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max]

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/515 (69%), Positives = 406/515 (78%), Gaps = 18/515 (3%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAI 60
           ML SPG+SP H++SPSPS SQ    ES     +  +S+  K P      VLDEDTYV A+
Sbjct: 1   MLQSPGHSPLHISSPSPSISQ----ESAQKPNDPPSSSCAKHP-----AVLDEDTYVEAL 51

Query: 61  ESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQ 120
           E IIERDYFPD+SKLRDR +WL+A +TGDPV IR+AQLKI+ERR       N +   RT 
Sbjct: 52  EKIIERDYFPDISKLRDRLDWLEAIKTGDPVVIREAQLKILERRAGTAKVTNHNDTSRTT 111

Query: 121 TETPGSTFARNFTPFDEFDVNIT-TPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKHTS 179
           + TPGSTF RNFTP DEFD   + TP+     + EG   DG   VD S+ LD+F+R++TS
Sbjct: 112 SHTPGSTFVRNFTPLDEFDGKPSQTPRAPAPEAKEGENNDGG--VDTSLGLDQFMRRYTS 169

Query: 180 EDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEG 239
           EDN SFSKILEKVN+KRKER+ +L E     +   IEDVK+DRITDGYGTSYQPPSTLEG
Sbjct: 170 EDNHSFSKILEKVNKKRKERFGYLNE-----DVQGIEDVKRDRITDGYGTSYQPPSTLEG 224

Query: 240 WKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVE 299
           W YTAKNLLMYHPAD GE PLTEEE+A R+K  TKEIN+ NTRFHGK+MDSRP DDGTVE
Sbjct: 225 WNYTAKNLLMYHPADRGEVPLTEEERAHRIKAATKEINRGNTRFHGKMMDSRPKDDGTVE 284

Query: 300 VLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPG 359
           VLYTPV G TP P+  R+GDK+KKYDLED+RKTPN FY+ESGKKAENGYSFVKTPSPAPG
Sbjct: 285 VLYTPVGGATPAPMSLREGDKLKKYDLEDLRKTPNPFYLESGKKAENGYSFVKTPSPAPG 344

Query: 360 ADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKL 419
            DESPFITWGEIEGTPLRL+ EDTP+DIGGS DGPH+KIPSAP RD  AH LSREA+RK+
Sbjct: 345 VDESPFITWGEIEGTPLRLDLEDTPLDIGGSADGPHYKIPSAPARDSKAHSLSREAARKI 404

Query: 420 KERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRGSSP 479
           +ERSKMF KPPL SP R GSASPS + LSPAAQKF+RNA AKSSSSVD+ LRASYRGS+P
Sbjct: 405 RERSKMFHKPPLASPVRGGSASPSMRTLSPAAQKFVRNAFAKSSSSVDETLRASYRGSTP 464

Query: 480 VTGTPKG-GRSVSRLGRDVSLSSRSPSVREGSNPP 513
              TP+   RSVSR GRD SL+SRSPSVREGSNPP
Sbjct: 465 ALATPRSVSRSVSRFGRDGSLASRSPSVREGSNPP 499

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357495361|ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|355519304|gb|AET00928.1| Protein DGCR14 [Medicago truncatula]

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/519 (68%), Positives = 410/519 (78%), Gaps = 14/519 (2%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAI 60
           ML SPG+SP HL+SPSPSPS S F    + N   S S+ Q     +   VLDEDTY  A+
Sbjct: 1   MLQSPGHSPLHLSSPSPSPSISEFS---IQNPKKSNSSVQHQKNHRHPTVLDEDTYAEAL 57

Query: 61  ESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERR---GKKVISLNS-DGK 116
           E IIERDYFPD+SKLRDR +WL+A +TGDPVQIRDAQLKI+ERR   G KV  L++ D +
Sbjct: 58  EKIIERDYFPDISKLRDRLDWLEAIKTGDPVQIRDAQLKIIERRRVGGGKVTPLHTVDSR 117

Query: 117 IRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRK 176
           I   + TPGSTF RNFTP DEFD    TP V     GEG   D    VD ++ LD+FL +
Sbjct: 118 I---SRTPGSTFVRNFTPLDEFDGK--TPVVNGLGVGEGEKED-VGGVDTNLGLDQFLGR 171

Query: 177 HTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRD-NNNLIEDVKKDRITDGYGTSYQPPS 235
           +TSEDN SFSKILE+VNRKRKER+ +L +    + N + +ED K+DRITDGYGTSYQPPS
Sbjct: 172 YTSEDNQSFSKILERVNRKRKERFGYLEDSVNSNANGDAVEDEKRDRITDGYGTSYQPPS 231

Query: 236 TLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDD 295
           TLEGW YTAKNLLMYHPAD GE PLTEEE+AVR+K  TKEI++ NTRFHGK+MDSRP +D
Sbjct: 232 TLEGWNYTAKNLLMYHPADRGEVPLTEEERAVRIKAATKEIDRVNTRFHGKMMDSRPKED 291

Query: 296 GTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPS 355
           GTVE+LYTPVAG TP P+  RD DK+KKYDLED+RKTPN FY+ESGKKA+NGYS+VKTPS
Sbjct: 292 GTVEMLYTPVAGATPVPMSFRDADKLKKYDLEDLRKTPNPFYLESGKKADNGYSYVKTPS 351

Query: 356 PAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREA 415
           PAPGADESPFITWGEIEGTPLRL+ EDTPIDIGGS DGPH++IPSAP RD  AH LSREA
Sbjct: 352 PAPGADESPFITWGEIEGTPLRLDMEDTPIDIGGSADGPHYRIPSAPARDAKAHSLSREA 411

Query: 416 SRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYR 475
           +R L+ERSK F KPPL SP R GSASPS + LSPAAQKF+RNA+AKSSSSVD+ LRASYR
Sbjct: 412 ARNLRERSKKFCKPPLASPARGGSASPSMRTLSPAAQKFVRNAIAKSSSSVDETLRASYR 471

Query: 476 GSSPVTGTPKGGRSVSRLGRDVSLSSRSPSVREGSNPPW 514
           GS+P   TP   RSVSRLGRD S  SRSPSVR+GSNPPW
Sbjct: 472 GSTPALATPTRVRSVSRLGRDESTVSRSPSVRDGSNPPW 510

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231871|ref|NP_187436.1| protein DGCR14 [Arabidopsis thaliana] gi|6466961|gb|AAF13096.1|AC009176_23 hypothetical protein [Arabidopsis thaliana] gi|6648191|gb|AAF21189.1|AC013483_13 hypothetical protein [Arabidopsis thaliana] gi|332641083|gb|AEE74604.1| protein DGCR14 [Arabidopsis thaliana]

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/481 (68%), Positives = 393/481 (81%), Gaps = 15/481 (3%)

Query: 36  ASATQKVP--PKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQI 93
           +S+++ +P  P+KR +VLDED YV AIE IIERDYFPD++KLRDR +W+QA +T DP+QI
Sbjct: 31  SSSSEIIPRNPRKRMRVLDEDAYVEAIEKIIERDYFPDITKLRDRLDWIQAVKTRDPIQI 90

Query: 94  RDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNI-TTPKV-GVEL 151
           RDAQLKI+ERRGKK  + +  G    +T+TPGSTF RNFTP DEFD     TP V G E 
Sbjct: 91  RDAQLKIIERRGKK--ANHHVGDTEGKTQTPGSTFLRNFTPLDEFDGKTPRTPGVSGREF 148

Query: 152 SGEGV-CRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRD 210
            G  V   DG +++D+++ LDEF R++TSEDN+SFSKILEKVNRK+KE+Y FLLEGEK D
Sbjct: 149 HGVEVDAGDGDEDIDLNLSLDEFFRRYTSEDNESFSKILEKVNRKKKEKYGFLLEGEKED 208

Query: 211 NNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLK 270
             + IEDVK+DRITDGYGTS QPPSTLEGWKYTAKNLLMYHPAD GEAPLTE E+AVRL 
Sbjct: 209 GKS-IEDVKRDRITDGYGTSDQPPSTLEGWKYTAKNLLMYHPADRGEAPLTEAERAVRLL 267

Query: 271 GLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMR 330
           GLTKEI K NTRFHGK MDSRP +DG+VE+LYTP+AG++P  +  RD DK K+YDL+D+R
Sbjct: 268 GLTKEIVKGNTRFHGKTMDSRPREDGSVEILYTPIAGSSPMHISGRDRDKSKRYDLDDLR 327

Query: 331 KTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGS 390
           KTPN FYVES K+A+NGYSFV+TPSPAPG DESPFITWGEI+GTP+RL+ EDTPIDIGGS
Sbjct: 328 KTPNPFYVESDKRADNGYSFVRTPSPAPGLDESPFITWGEIDGTPMRLDLEDTPIDIGGS 387

Query: 391 GDGPHFKIPSAPTRDVMAHELSREASRKLKERSK-MFQKPPLPSPYRAGSASPSGKLLSP 449
            DGPH+ IPSAP RDV AH LSR+ASRKL+ERS  MF+KPPLPSP+R+GSASP+ + LSP
Sbjct: 388 ADGPHYNIPSAPPRDVRAHSLSRDASRKLRERSNSMFKKPPLPSPHRSGSASPNVRTLSP 447

Query: 450 AAQKFMRNAMAKSSSSVDDALRASYRGSSPVTG-----TPKGGRSVSRLGRD-VSLSSRS 503
           AAQKF R A+AKSSS+VD++LRASYRG+SP        TPK  RS+SR G+D  S  +RS
Sbjct: 448 AAQKFFRKAIAKSSSTVDESLRASYRGASPRGASPGAVTPKSVRSISRFGKDGTSSETRS 507

Query: 504 P 504
           P
Sbjct: 508 P 508

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829338|ref|XP_002882551.1| hypothetical protein ARALYDRAFT_478116 [Arabidopsis lyrata subsp. lyrata] gi|297328391|gb|EFH58810.1| hypothetical protein ARALYDRAFT_478116 [Arabidopsis lyrata subsp. lyrata]

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 328/476 (68%), Positives = 390/476 (81%), Gaps = 10/476 (2%)

Query: 36  ASATQKVP--PKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQI 93
           +S ++ +P  P+KR +VLDED YV AIE IIERDYFPD++KLRDR +W+QA +T DP+QI
Sbjct: 31  SSFSEIIPRNPRKRMRVLDEDAYVEAIEKIIERDYFPDITKLRDRLDWIQAVKTRDPIQI 90

Query: 94  RDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNI-TTPKV-GVEL 151
           RDAQLKI+ERRGKK  + +  G    +T+TPGSTF RNFTP DEFD     TP V G E 
Sbjct: 91  RDAQLKIIERRGKK--ANHHVGDTEGKTQTPGSTFLRNFTPLDEFDGKTPRTPGVSGREF 148

Query: 152 -SGEGVCRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRD 210
             GE     G  ++D+++ LDEF R++TSEDNDSFSKILEKVNRK+KE+Y FLLEGEK D
Sbjct: 149 HGGEVDADAGDGDIDLNLSLDEFFRRYTSEDNDSFSKILEKVNRKKKEKYGFLLEGEKED 208

Query: 211 NNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLK 270
             + IED+K+DRITDGYGTS QPPSTLEGWKYTAKNLLMYHPAD GEAPLTE E+AVRL 
Sbjct: 209 GKS-IEDLKRDRITDGYGTSDQPPSTLEGWKYTAKNLLMYHPADRGEAPLTEAERAVRLL 267

Query: 271 GLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMR 330
           GLTKEI K NTRFHGK MDSRP +DG+VE+LYTP+AG++P  +  RD DK K+YDL+D+R
Sbjct: 268 GLTKEIVKGNTRFHGKTMDSRPREDGSVEILYTPIAGSSPMHISGRDRDKSKRYDLDDLR 327

Query: 331 KTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGS 390
           KTPN FYVES K+A+NGYSFV+TPSPAPG DESPFITWGEI+GTP+RL+ EDTPIDIGGS
Sbjct: 328 KTPNPFYVESDKRADNGYSFVRTPSPAPGLDESPFITWGEIDGTPMRLDPEDTPIDIGGS 387

Query: 391 GDGPHFKIPSAPTRDVMAHELSREASRKLKERSK-MFQKPPLPSPYRAGSASPSGKLLSP 449
            DGPH+ IPSAP RDV AH LSR+ASRK++ERS  MF+KPPLPSP+R+GSASP+ + LSP
Sbjct: 388 ADGPHYNIPSAPPRDVRAHSLSRDASRKIRERSNSMFKKPPLPSPHRSGSASPNVRTLSP 447

Query: 450 AAQKFMRNAMAKSSSSVDDALRASYRGSSPVTGTPKGGRSVSRLGRD-VSLSSRSP 504
           AAQKF R A+AKSSS+VD++LRASYRG+SP   TPK  RSVSR G+D  S  +RSP
Sbjct: 448 AAQKFFRRAIAKSSSTVDESLRASYRGASPGAVTPKSVRSVSRFGKDGTSSETRSP 503

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302121701|gb|ADK92867.1| DGCR-like protein [Hypericum perforatum]

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 333/510 (65%), Positives = 399/510 (78%), Gaps = 23/510 (4%)

Query: 1   MLLSPGNSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPP-KKRAKVLDEDTYVSA 59
           MLLSPG+SPRH+ASPSP+P+  + P S     +++ + T   PP +KR  VLDEDTYV+A
Sbjct: 1   MLLSPGHSPRHVASPSPTPNPEATPRS---GASSAGALTTYTPPSRKRQAVLDEDTYVAA 57

Query: 60  IESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERR-GKKVISL-NSDGKI 117
           IE IIERDYFPD++KL+DR +WL+A +TGDP+QIRDAQLKI+ERR G+KVIS  NS  + 
Sbjct: 58  IEKIIERDYFPDIAKLQDRLDWLEAVKTGDPIQIRDAQLKIVERRRGRKVISTPNSVSRA 117

Query: 118 RTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKH 177
           R +T TPG+ F    TPFD+F+          E  GEG   DG   +D S+ LDEF R++
Sbjct: 118 RVRTVTPGTGFTGLNTPFDDFERG--------EALGEG-RDDGAAGIDESLGLDEFFRRY 168

Query: 178 TSEDNDSFSKILEKVNRKRKER-YQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPST 236
           TSEDN+SFSKIL+K NRKRKER   +LLEGE+     LI D K+DRITDGYGTS QP ST
Sbjct: 169 TSEDNESFSKILDKDNRKRKERNVHYLLEGER----ELIGDAKRDRITDGYGTSDQPVST 224

Query: 237 LEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDG 296
           L+GWK+ A NLLMYHP    EAPLT+E++ +RLK LTKEI K NTRFHGK+ D+RP +DG
Sbjct: 225 LDGWKFRADNLLMYHP--VKEAPLTDEDRELRLKALTKEITKGNTRFHGKMSDTRPVEDG 282

Query: 297 TVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSP 356
            VEVLY P+AG TP P FDRDG+K KKYDLED+++TPN FYVES KKA+NGYSFVKTPSP
Sbjct: 283 GVEVLYGPLAGATPVP-FDRDGEKGKKYDLEDLKRTPNLFYVESQKKADNGYSFVKTPSP 341

Query: 357 APGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREAS 416
           APGADESPFITWGEIEGTPLRLE+ED P  IG S DGPHF++P+ P RDV AH LSREA+
Sbjct: 342 APGADESPFITWGEIEGTPLRLESEDAPFGIGSSSDGPHFQMPNPPVRDVKAHSLSREAA 401

Query: 417 RKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRG 476
           +KL+ERS+MFQKPPLPSP R GSASP+ + LS AAQKF+RN + KSSS VD+ LRASYRG
Sbjct: 402 KKLRERSRMFQKPPLPSPSRGGSASPNVRTLSSAAQKFVRNTIFKSSSLVDETLRASYRG 461

Query: 477 SSPVTGTPKGGRSVSRLGRDVSLSSRSPSV 506
           +SP   TPK GRS+SRLGRD S+ SRSPS+
Sbjct: 462 ASPGRLTPKSGRSLSRLGRDGSIGSRSPSM 491

Source: Hypericum perforatum

Species: Hypericum perforatum

Genus: Hypericum

Family: Hypericaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	514
TAIR|locus:2077372	508	AT3G07790 "AT3G07790" [Arabido	0.964	0.976	0.658	1.1e-174
UNIPROTKB|E1C0J8	481	DGCR14 "Uncharacterized protei	0.369	0.395	0.345	1.1e-41
UNIPROTKB|F1RK78	478	DGCR14 "Uncharacterized protei	0.379	0.407	0.324	3.5e-36
UNIPROTKB|E2RJZ1	478	DGCR14 "Uncharacterized protei	0.361	0.389	0.331	2.1e-35
UNIPROTKB|Q96DF8	476	DGCR14 "Protein DGCR14" [Homo	0.357	0.386	0.327	3.6e-34
MGI|MGI:107854	479	Dgcr14 "DiGeorge syndrome crit	0.373	0.400	0.323	1.1e-33
UNIPROTKB|A6QQU2	478	DGCR14 "Uncharacterized protei	0.361	0.389	0.308	1.4e-33
RGD|1308218	480	Dgcr14 "DiGeorge syndrome crit	0.371	0.397	0.320	3.2e-33
FB|FBgn0023506	501	Es2 "Es2" [Drosophila melanoga	0.515	0.528	0.306	7.1e-31
WB|WBGene00018371	531	ess-2 [Caenorhabditis elegans	0.750	0.726	0.284	1.4e-28

TAIR|locus:2077372 AT3G07790 "AT3G07790" [Arabidopsis thaliana (taxid:3702)]

 Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
 Identities = 340/516 (65%), Positives = 407/516 (78%)

Query:     1 MLLSPGNSPRHLAXXXXXXXXXXXXXXYLTNVNNSASATQKVP--PKKRAKVLDEDTYVS 58
             M LSPG+SPR ++               L +   S+S+ + +P  P+KR +VLDED YV 
Sbjct:     1 MFLSPGHSPRQISSPSPSSYSDDT----LRSTPRSSSS-EIIPRNPRKRMRVLDEDAYVE 55

Query:    59 AIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIR 118
             AIE IIERDYFPD++KLRDR +W+QA +T DP+QIRDAQLKI+ERRGKK  + +  G   
Sbjct:    56 AIEKIIERDYFPDITKLRDRLDWIQAVKTRDPIQIRDAQLKIIERRGKK--ANHHVGDTE 113

Query:   119 TQTETPGSTFARNFTPFDEFDVNIT-TPKV-GVELSGEGV-CRDGTDEVDVSMRLDEFLR 175
              +T+TPGSTF RNFTP DEFD     TP V G E  G  V   DG +++D+++ LDEF R
Sbjct:   114 GKTQTPGSTFLRNFTPLDEFDGKTPRTPGVSGREFHGVEVDAGDGDEDIDLNLSLDEFFR 173

Query:   176 KHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPS 235
             ++TSEDN+SFSKILEKVNRK+KE+Y FLLEGEK D  + IEDVK+DRITDGYGTS QPPS
Sbjct:   174 RYTSEDNESFSKILEKVNRKKKEKYGFLLEGEKEDGKS-IEDVKRDRITDGYGTSDQPPS 232

Query:   236 TLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDD 295
             TLEGWKYTAKNLLMYHPAD GEAPLTE E+AVRL GLTKEI K NTRFHGK MDSRP +D
Sbjct:   233 TLEGWKYTAKNLLMYHPADRGEAPLTEAERAVRLLGLTKEIVKGNTRFHGKTMDSRPRED 292

Query:   296 GTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPS 355
             G+VE+LYTP+AG++P  +  RD DK K+YDL+D+RKTPN FYVES K+A+NGYSFV+TPS
Sbjct:   293 GSVEILYTPIAGSSPMHISGRDRDKSKRYDLDDLRKTPNPFYVESDKRADNGYSFVRTPS 352

Query:   356 PAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREA 415
             PAPG DESPFITWGEI+GTP+RL+ EDTPIDIGGS DGPH+ IPSAP RDV AH LSR+A
Sbjct:   353 PAPGLDESPFITWGEIDGTPMRLDLEDTPIDIGGSADGPHYNIPSAPPRDVRAHSLSRDA 412

Query:   416 SRKLKERSK-MFQKPPLPSPYRAGSASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASY 474
             SRKL+ERS  MF+KPPLPSP+R+GSASP+ + LSPAAQKF R A+AKSSS+VD++LRASY
Sbjct:   413 SRKLRERSNSMFKKPPLPSPHRSGSASPNVRTLSPAAQKFFRKAIAKSSSTVDESLRASY 472

Query:   475 RGSSP---VTG--TPKGGRSVSRLGRD-VSLSSRSP 504
             RG+SP     G  TPK  RS+SR G+D  S  +RSP
Sbjct:   473 RGASPRGASPGAVTPKSVRSISRFGKDGTSSETRSP 508

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0042732 "D-xylose metabolic process" evidence=RCA

UNIPROTKB|E1C0J8 DGCR14 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 269 (99.8 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
 Identities = 74/214 (34%), Positives = 107/214 (50%)

Query:    45 KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERR 104
             K+  K+LDED Y+ ++E+II+RD+FPD+ KLR + E+L+A   GD  ++R   +K     
Sbjct:    34 KRPKKILDEDAYIESLENIIQRDFFPDVEKLRAQKEYLEAEENGDLEKMRQIAIKF---- 89

Query:   105 GKKVISLNSDGKIRTQTETPGSTFARNFTP-FDEFDVNI-TTPKVGVELSGEGVCRDGTD 162
             G  +      GK    T  P  T A   TP      + + T  + G   + EG      D
Sbjct:    90 GSSL------GKSSRDTPVPYVTPATFETPEVHPSGLPLGTNSRAGTRAAEEGETEK--D 141

Query:   163 EVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEK----RDNNNLIEDV 218
             + D    LD FL KHTSEDN SF +I+E    K K ++ +L   E+    R N NL    
Sbjct:   142 DKDALPNLDSFLAKHTSEDNASFEQIMEVAKEKEKVKHAWLYSAEEEYAQRRNKNLALPS 201

Query:   219 KKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHP 252
              + +  +           LE W+YTA+N LMY+P
Sbjct:   202 AEQQALENVKAG------LETWEYTARNTLMYYP 229

GO:0007399 "nervous system development" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

UNIPROTKB|F1RK78 DGCR14 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 245 (91.3 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
 Identities = 74/228 (32%), Positives = 119/228 (52%)

Query:    37 SATQKVPPKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDA 96
             +A +  P   R +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  ++R  
Sbjct:    24 AAGEAGPATSRQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQI 83

Query:    97 QLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGV 156
              +K     G  +      GK+  +   P  T A   TP    +V+  +  VG +  G G 
Sbjct:    84 AIKF----GSAL------GKMSREPPPPYVTPATFETP----EVHTGSGVVGSKARGRGR 129

Query:   157 -CRDGT-----DEVDVSM-RLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGE-- 207
                DGT     +E + ++  LD FL ++TSEDN SF +++E    K + R+ +L + E  
Sbjct:   130 GLEDGTGESVKEEEEAALPSLDVFLSRYTSEDNASFQEVMEVAKEKSRARHAWLYQAEEE 189

Query:   208 --KRDNNNL-IEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHP 252
               KR  +NL +   +   I      S Q  + +E WKY AKN LMY+P
Sbjct:   190 FEKRQKDNLELPSAEHQAIE-----SSQ--AGVETWKYKAKNSLMYYP 230

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

UNIPROTKB|E2RJZ1 DGCR14 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 235 (87.8 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
 Identities = 72/217 (33%), Positives = 112/217 (51%)

Query:    47 RAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGK 106
             + +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  ++R   +K     G 
Sbjct:    34 KQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKF----GS 89

Query:   107 KVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGV-CRDGT---- 161
              +      GK+  +   P  T A   TP    DV+  T  VG +  G G    DG     
Sbjct:    90 AL------GKMSREPPPPYVTPATFETP----DVHTGTGVVGNKPRGRGRGLEDGDGEAG 139

Query:   162 --DEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGE----KRDNNNLI 215
               +E +    LD FL ++TSEDN SF +I+E    K + R+ +L + E    KR  +NL 
Sbjct:   140 EEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKEKSRARHTWLYQAEEEFEKRQKDNLA 199

Query:   216 EDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHP 252
                 + +  +    S Q  + +E WKY AKN LMY+P
Sbjct:   200 LPSAEHQAIE----SSQ--AGVETWKYKAKNSLMYYP 230

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

UNIPROTKB|Q96DF8 DGCR14 "Protein DGCR14" [Homo sapiens (taxid:9606)]

 Score = 228 (85.3 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
 Identities = 71/217 (32%), Positives = 114/217 (52%)

Query:    47 RAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGK 106
             + +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  ++R   +K     G 
Sbjct:    34 KQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKF----GS 89

Query:   107 KVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELS--GEGVCRDGT--- 161
              +      GK+  +   P  T A   TP    +V+  T  VG +    G G+  DG    
Sbjct:    90 AL------GKMSREPPPPYVTPATFETP----EVHAGTGVVGNKPRPRGRGL-EDGEAGE 138

Query:   162 -DEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGE----KRDNNNL-I 215
              +E +    LD FL ++TSEDN SF +I+E    + + R+ +L + E    KR  +NL +
Sbjct:   139 EEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQAEEEFEKRQKDNLEL 198

Query:   216 EDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHP 252
                +   I      S Q  +++E WKY AKN LMY+P
Sbjct:   199 PSAEHQAIE-----SSQ--ASVETWKYKAKNSLMYYP 228

GO:0005634 "nucleus" evidence=ISS

GO:0007399 "nervous system development" evidence=ISS

GO:0003674 "molecular_function" evidence=ND

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

MGI|MGI:107854 Dgcr14 "DiGeorge syndrome critical region gene 14" [Mus musculus (taxid:10090)]

 Score = 224 (83.9 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 69/213 (32%), Positives = 107/213 (50%)

Query:    45 KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERR 104
             + R +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  ++R   +K     
Sbjct:    35 RSRQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFGSAL 94

Query:   105 GKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEV 164
             GK  IS            TP +       P      N   P+ G +L  +G   +  +E 
Sbjct:    95 GK--ISREPPPPY----VTPATFETPEVHPGSAVLGNKPRPQ-GRDLD-DGEAGE-EEEK 145

Query:   165 DVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGE----KRDNNNL-IEDVK 219
             +    LD FL ++TSEDN SF +I+E    K   R+ +L + E    KR  +NL +   +
Sbjct:   146 EPLPSLDVFLSQYTSEDNASFQEIMEVAKEKSHARHAWLYQAEEEFEKRQKDNLELPSAE 205

Query:   220 KDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHP 252
                I      S Q  + +E WKY AKN LMY+P
Sbjct:   206 HQAIE-----SSQ--AGVETWKYKAKNSLMYYP 231

GO:0005634 "nucleus" evidence=IDA

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

UNIPROTKB|A6QQU2 DGCR14 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 223 (83.6 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
 Identities = 67/217 (30%), Positives = 107/217 (49%)

Query:    47 RAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGK 106
             R +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  ++R   +K     G 
Sbjct:    34 RQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKF----GS 89

Query:   107 KVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEV-- 164
              +      GK   +   P  T A   TP      ++   K      G G+  DG  E   
Sbjct:    90 AL------GKTSREPPPPYVTPATFETPELHMGPSVVGGKARAR--GRGL-EDGDGEAAE 140

Query:   165 DVSMR----LDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGE----KRDNNNL-I 215
             + +      LD FL +HTSEDN SF +I+E    + + R+ +L + E    KR  ++L +
Sbjct:   141 EAAAEPLPSLDVFLSRHTSEDNASFREIMEVAKERGRARHAWLYQAEEEFEKRQKDSLAL 200

Query:   216 EDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHP 252
                +   +  G        + +E WKY AKN LMY+P
Sbjct:   201 PSAEHQAVESGQ-------AGVETWKYKAKNSLMYYP 230

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

RGD|1308218 Dgcr14 "DiGeorge syndrome critical region gene 14" [Rattus norvegicus (taxid:10116)]

 Score = 221 (82.9 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
 Identities = 69/215 (32%), Positives = 106/215 (49%)

Query:    45 KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERR 104
             K + +VLDE+ Y+  ++++I+RD+FPD+ KL+ + E+L+A   GD  ++R   +K     
Sbjct:    35 KSKQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKF---- 90

Query:   105 GKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVE-LSGEGVCRDGTDE 163
             G  +      GKI  +   P  T A   TP       +   K   +    E     G +E
Sbjct:    91 GSAL------GKISREPPPPYVTPATFETPEVHPGSGVLGSKPRPQGRDPEDAGEAGEEE 144

Query:   164 VDVSM-RLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGE----KRDNNNL-IED 217
                 +  LD FL ++TSEDN SF +I+E    K   R+ +L + E    KR  +NL +  
Sbjct:   145 EKEPLPSLDVFLSRYTSEDNASFQEIMEVAKEKSHARHAWLYQAEEEFEKRQKDNLELPS 204

Query:   218 VKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHP 252
              +   I      S Q  + +E WKY AKN LMY+P
Sbjct:   205 AEHQAIE-----SSQ--AGVETWKYKAKNSLMYYP 232

GO:0005634 "nucleus" evidence=ISO

GO:0007399 "nervous system development" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO

FB|FBgn0023506 Es2 "Es2" [Drosophila melanogaster (taxid:7227)]

 Score = 250 (93.1 bits), Expect = 7.1e-31, Sum P(2) = 7.1e-31
 Identities = 93/303 (30%), Positives = 135/303 (44%)

Query:    29 LTNVNNSASATQKVPP-----KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQ 83
             +  V NSA A  K P      K + K+L E+ Y+  +  II+RD+FPDL +LR + ++L 
Sbjct:    24 VARVQNSALAEFKKPTAMVRHKNKPKILTEEKYIEEMSKIIQRDFFPDLERLRAQNDYLD 83

Query:    84 ATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNIT 143
             A    D VQ+ +    I ER     IS       R       +TF    TP  +   +  
Sbjct:    84 AESRRDFVQMAE----IRERYSLGRISGTGRSTSRRNNAMSPATFE---TPVSQAKCS-N 135

Query:   144 TPKVGVELSGEGVCRDGTDEVDVSMR-------LDEFLRKHTSEDNDSFSKILEKVNRKR 196
             TP      +      DG+++ D   R       LD FL+K+TSEDN SF +I+E    K 
Sbjct:   136 TPLPNSRATDTPFSTDGSEKSDAEGRDTTAKLSLDAFLQKYTSEDNQSFQEIIETAEAKL 195

Query:   197 KERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTL---EGWKYTAKNLLMYHPA 253
             +++Y  L   EK       E +++  +     T ++ P  L   E W YT  N +MY P 
Sbjct:   196 RQKYAVLYNHEKLS----AEQLQRALMLPSIETQFEEPDPLRKIETWNYTNMNSIMYVP- 250

Query:   254 DCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKI----MDSRPNDDGTVEVLYTPVAGTT 309
             D  E   TEEE+ V+L    + I    TR   +     MD++  +D   EV      G T
Sbjct:   251 DGVE--YTEEER-VQLAERKQSIQHNATRLPDEAKHREMDTKKLND---EVPQNGAGGAT 304

Query:   310 PGP 312
               P
Sbjct:   305 ATP 307

GO:0004757 "sepiapterin reductase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;NAS

GO:0007399 "nervous system development" evidence=ISS

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

WB|WBGene00018371 ess-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 337 (123.7 bits), Expect = 1.4e-28, P = 1.4e-28
 Identities = 129/454 (28%), Positives = 206/454 (45%)

Query:    31 NVNNSASATQK--VPPKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTG 88
             N       +QK  V  K   +V+ E+ Y++ ++ IIE+DYFP L K++ + E+L+A    
Sbjct:    20 NEGKVVKLSQKTLVTKKIERQVVPEEKYIAGLDKIIEKDYFPHLKKMQAQKEYLEAVANK 79

Query:    89 DPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVN------- 141
             D  +I++ Q+K     G    S+ +D   RT   T  +T A + + FD            
Sbjct:    80 DINKIKELQMKFCST-G----SVRTDRSFRTPITTRSTTEAPDVSSFDADTPGPSSASTS 134

Query:   142 -----ITTPKVGVELSGEGVCRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKR 196
                  + +P       G+    +   +      L  +L K+TSEDN SF + L KV R+R
Sbjct:   135 SAHDWMQSPMPFANEEGDNEALNRKRKKKKEETLTSYLNKYTSEDNASFEE-LAKVMRER 193

Query:   197 KE-RYQFLLEGEKRDNNNLIE--------DVKKDRITDGYGTSYQPPSTLEGWKYTAKNL 247
             ++ R  ++ + E+  N NL+         DV+   +          P  ++ W Y A N 
Sbjct:   194 EDARRPWVYKAEEEHNKNLVTRQAIAAEADVQL-ALKHAVDADDNRPLNVDNWAYKAWNT 252

Query:   248 LMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRF--HGKIMDSRPNDDGTVEVLYTPV 305
             ++++P D G A LT  E A   +    EINK  TRF   GK+   +P+D+       +  
Sbjct:   253 VLFNP-D-GAA-LTPAEIADAARKQQTEINKRGTRFPDSGKL---KPSDEAMTRAAVSHA 306

Query:   306 AGTTPGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPF 365
                  G V D  G+++          TP            N +  ++TP+P P   +SP 
Sbjct:   307 LANA-GKV-DFLGNEV----------TP-----------ANSFKLLETPNPNPDDMDSPL 343

Query:   366 ITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKM 425
             +TWGEI+GTP RL+  D   +    G  P FKIP  P R+ +A  ++   + K +++ K+
Sbjct:   344 MTWGEIDGTPFRLDAPDVT-EHSLPGAAPVFKIPEVPYREKIAQSMNDSIAAKYRDKRKV 402

Query:   426 FQKPPLPSPYRA----GSASPSGKL--LSPAAQK 453
               +    + +      GS   S KL  LSPAAQK
Sbjct:   403 AMRAAEGAHFSRTPGFGSKRVSDKLAQLSPAAQK 436

GO:0007126 "meiosis" evidence=IMP

GO:0045132 "meiotic chromosome segregation" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00002007 hypothetical protein (515 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	514
pfam09751	390	pfam09751, Es2, Nuclear protein Es2	2e-92

>gnl|CDD|220380 pfam09751, Es2, Nuclear protein Es2

 Score =  286 bits (734), Expect = 2e-92
 Identities = 146/421 (34%), Positives = 205/421 (48%), Gaps = 43/421 (10%)

Query: 46  KRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRG 105
           ++ KVLDE+ YV A+E IIERD+FPDL KLR + E+L A  +GD  +IR+ Q K+    G
Sbjct: 1   RKKKVLDEEDYVEALEKIIERDFFPDLLKLRAQNEYLDAVESGDKERIREIQRKLTSLMG 60

Query: 106 KKVISLNSDGKIRT---QTETPGSTFARNF-TPFDEFDVNITTPKVGVELSGEGVCRDGT 161
           K   +  + G+ RT    +    +    +  T  D   +   TP+  V    EG      
Sbjct: 61  KS--TEVTPGRFRTPSSSSGLRNTPNPGSPSTSGDHTPMGGDTPRSVVSSETEGEEEGKG 118

Query: 162 DEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNL--IEDVK 219
            + D ++ LDEF  K+TSEDN SF ++LEK N KR+E++ +L E EK  N  +     + 
Sbjct: 119 KKKDDNLSLDEFQAKYTSEDNASFEELLEKQNEKRREKHAWLYEAEKEHNRKIAQRLALP 178

Query: 220 KDRITDGYG-----TSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGLTK 274
                   G         P + L+ WKY AKN LM+ P    ++PL   + A R      
Sbjct: 179 SIEEQTKLGIKSLAIEDNPAANLDTWKYKAKNSLMFMPDGVEDSPLETIQAAAR----AP 234

Query: 275 EINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPN 334
           EI   NTRF  +  +  P       +                     +  +     +TP 
Sbjct: 235 EIVHKNTRFS-QEYNPFPKSPSKSAIQEAIAGK--------ARAKDGEVGEDGKGSETPR 285

Query: 335 RFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGP 394
                      NGY+FV TPSPAPG DESP +TWGEI+GTPLRL+  DT      S  GP
Sbjct: 286 V----------NGYAFVDTPSPAPGVDESPLMTWGEIDGTPLRLDGSDTG-----STTGP 330

Query: 395 HFKIPSAPTRDVMAHELSREASR-KLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAAQK 453
            FKIP    R+ +AH+L  +A+R K +E++K   +  L SP  + +       LSPAAQ+
Sbjct: 331 SFKIPEPSRREKLAHKLVEKAARAKRREKAKGALRRNLRSP-TSPTTPKRLSRLSPAAQR 389

Query: 454 F 454
            
Sbjct: 390 L 390

This entry is of a family of proteins of approximately 500 residues with alternating regions of low complexity and conservation where the domain similarities are strong. Apart from a predicted coiled-coil domain, no other known functional domains have been characterized. The protein appears to be expressed in the nucleus and particularly highly in the pons sub-region of the brain. The protein is clearly necessary for normal development of the nervous system. Length = 390

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	514
KOG2627	488	consensus Nuclear protein ES2 [General function pr	100.0
PF09751	414	Es2: Nuclear protein Es2; InterPro: IPR019148 This	100.0

>KOG2627 consensus Nuclear protein ES2 [General function prediction only]

Probab=100.00  E-value=3e-106  Score=828.00  Aligned_cols=458  Identities=40%  Similarity=0.589  Sum_probs=360.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCcccchhhHHHHHHhhhhhccCCCchhhhhHHHHHHHHh
Q 038235            7 NSPRHLASPSPSPSQSSFPESYLTNVNNSASATQKVPPKKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATR   86 (514)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kk~~VLdED~Y~eaLs~II~RDFFPdL~klraQ~EYLdAle   86 (514)
                      |||+.+.++|++.+....+.+   .+....+.+....+++|++|||||+|||+|++||||||||||.|||+|+|||||++
T Consensus         1 ~s~~~~t~~s~a~~~~~~~~s---~~~~~~s~~~~~~~k~k~rvL~Ee~YIEgl~kIIqrDyFPDl~KLrAq~dyLeAe~   77 (488)
T KOG2627|consen    1 HSPRQITPGSPAMSLAKKINS---DPKQKVSPVNKVQTKKKPRVLDEEKYIEGLSKIIQRDYFPDLEKLRAQKDYLEAEE   77 (488)
T ss_pred             CCCCCCCCCchhhhhhhhhcc---cchhhcccccccccccCcccCcHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHh
Confidence            899999999999999888866   56666677788889999999999999999999999999999999999999999999


Q ss_pred             cCChHHHHHHHHHHHHhhcccccccCCCCCCCCCCCCCCcccCCCCCCCC--CCCcCCCCCCCCccCCC-CCccCCCCCC
Q 038235           87 TGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFD--EFDVNITTPKVGVELSG-EGVCRDGTDE  163 (514)
Q Consensus        87 s~D~~~ir~a~~k~~~r~~~~~~~~~~~~~~~~~~~TP~s~~~~~~tp~~--eTp~~~~~~~~~~~~~~-~~~~~~~~~~  163 (514)
                      +||+++|++||+||+++++.+....   .+.+.+ .|+.+++-...++..  .+|.. .+....++-.. ..+..+.+.+
T Consensus        78 ~~D~~qireiq~k~~~~~~~~t~~~---~~~r~~-~~s~sT~E~~~~~~~~~n~p~P-rs~~~s~pfa~ee~dkedl~~d  152 (488)
T KOG2627|consen   78 NGDFDQIREIQDKFLSYLIKKTSED---DPLRKT-LTSLSTFEIPKAQLDGENKPTP-RSRSVSRPFAGEEVDKEDLDED  152 (488)
T ss_pred             cCCHHHHHHHHHHHHHhhccccCCC---CCcccC-CCCccccccccccccccCCCCC-CCcccccccccccccccccccc
Confidence            9999999999999998775433222   111111 122222222222221  11100 00011111001 1111222337


Q ss_pred             CCCCCCHHHHhhhcCCchhHHHHHHHHHHHHHHHHhhHHhhhccccccccchHhhhhhccccCCCCCCCCCCCCccCcCC
Q 038235          164 VDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYT  243 (514)
Q Consensus       164 ~d~~lSLD~F~akYTSEDNaSF~eIlek~n~KrreKyaWl~~~ek~~~~~lie~~kr~~i~~~~~~~d~rpa~~d~Wkyk  243 (514)
                      ++.+||||.|++|||||||+||+||||.+++|+++||+|||.+|+++.+++|+..+.++|.+++..+|+ ++.+++|+|+
T Consensus       153 ~~~~lSLd~fl~rYTSEDNaSFqEimE~~~~k~r~k~~~ly~~Eke~~k~~~e~~~~~ai~~~~~~~d~-~~sietW~Y~  231 (488)
T KOG2627|consen  153 IDLNLSLDNFLRRYTSEDNASFQEIMEVASRKRREKHAWLYGAEKEQPKQTIEALNLDAIKHQAWESDQ-PKSIETWNYT  231 (488)
T ss_pred             chhhhhHHHHHHhhcccchhhHHHHHHHHHHHHHhhhhhhhhhhhcchhhhhhhhhhhhhhhhhccCCC-cccccccccc
Confidence            789999999999999999999999999999999999999999999998888998899999999998887 8999999999


Q ss_pred             CCCcccccCCCCCCCCCCHHHHHHHhhcCCCceeccCCCCCCCCCCCCCCCCCcccccccccCCCCCCCccccccccccc
Q 038235          244 AKNLLMYHPADCGEAPLTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKK  323 (514)
Q Consensus       244 akNsLMf~Pd~~~~~~~t~~e~~e~~~~~pk~I~~~NTR~~~~~~~~~~~~~~~~~~~~~~~a~~sp~~~~~rd~~~~k~  323 (514)
                      |+|+|||+|+|+...+ ++.|.++    .+++|+|+||||+.+.+++++....        .....+...+|.|.++   
T Consensus       232 akNslMY~Peg~~~t~-~e~q~a~----r~~qi~~~nTRfpd~~k~~~~d~~~--------i~a~~~~~~sg~d~~~---  295 (488)
T KOG2627|consen  232 AKNSLMYTPEGVHSTP-TEAQLAV----RLQQIKKNNTRFPDKTKDSRPDSTE--------INADVPQHLSGSDRDK---  295 (488)
T ss_pred             ccceeeecCCCCccch-HHHHHHH----HHHhhhhcccccCCcccccccchhh--------hhccccccccCCcccc---
Confidence            9999999999976655 5555444    3579999999999998887765222        2223444456655431   


Q ss_pred             chhhhhhcCCCCccccCCCcccCccccccCCCCCCCCCCCCccccccccCcccccCCCCCcccCCCCCCCCCccCCCCCh
Q 038235          324 YDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPT  403 (514)
Q Consensus       324 ~d~~~~~~tp~~~~~~s~~p~vnGY~fV~TPsp~PGvd~SPlMTWGeIegTP~rLd~~dtp~~~~~~~~gp~FkIpe~~~  403 (514)
                                   |+++.+|+||||+||.||+|+|||++||+||||||||||||||+.|||+.++  +.||.|+|||.++
T Consensus       296 -------------~v~~e~~~~ngf~fvrtPSP~Pg~~~SP~mTWGEIdGTP~Rld~~dtp~~~~--t~gP~F~IpE~pr  360 (488)
T KOG2627|consen  296 -------------YVESELPAANGFSFVRTPSPAPGVPESPNMTWGEIDGTPLRLDGFDTPVGSG--TSGPYFNIPERPR  360 (488)
T ss_pred             -------------cccccccccCCcccccCCCCCCCCCCCcccccccccCceeeecCCCCccccC--CCCCcccCCCCch
Confidence                         4567799999999999999999999999999999999999999999999865  8999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhccc-CCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHhccCCcchhHHhhhcccC-----
Q 038235          404 RDVMAHELSREASRKLKERSKMF-QKPPLPSPYRAG-SASPSGKLLSPAAQKFMRNAMAKSSSSVDDALRASYRG-----  476 (514)
Q Consensus       404 RE~La~~La~~as~k~R~k~~~~-~~~~~~sp~r~~-~~sP~~~~LSPAAqRL~~k~~~~~~~~~D~~LRaSY~~-----  476 (514)
                      ||+|||.|++.|++|+|+|++++ ..+..+.+++++ ..++.+.+||||||||+.+++++++.-++..+++||.+     
T Consensus       361 RE~la~sla~~isak~R~kkq~al~~a~~~~~sp~~~s~s~~l~~lSPAAQkL~tk~l~~~~sp~~rs~~as~p~~s~r~  440 (488)
T KOG2627|consen  361 RERLAASLARDISAKSRNKKQTALDSASTALNSPSTPSVSRKLANLSPAAQKLVTKKLGKSSSPAHRSSPASSPGTSLRT  440 (488)
T ss_pred             HHHHHHHHHHHHHHHHhHhHHHHHhccccccCCCCccCcchhhcccCHHHHHHHHHHhhcccCccccCCCCCCCCccccc
Confidence            99999999999999999999954 344444344443 55777889999999999999999887777777777766     


Q ss_pred             CCC--CCCCCCC-----Cc---ccccccCCCCCC-CCCC
Q 038235          477 SSP--VTGTPKG-----GR---SVSRLGRDVSLS-SRSP  504 (514)
Q Consensus       477 ~tp--~~~tp~~-----~~---~~~~~~~~~~~~-~~~~  504 (514)
                      .||  |..||++     ++   +++|||-|+.-+ +++|
T Consensus       441 ~tP~~G~~TP~s~~~pgtp~~~~i~r~g~~~t~s~~~~P  479 (488)
T KOG2627|consen  441 STPSKGSWTPTSAQTPGTPIESSISRFGKDRTDSTLPTP  479 (488)
T ss_pred             cCCcCCCCCCCCcCCCCCcccccccccccccccccccCc
Confidence            477  7888888     45   788999887655 5566

>PF09751 Es2: Nuclear protein Es2; InterPro: IPR019148 This entry represents a family of proteins of approximately 500 residues with alternating regions of low complexity and conservation where the domain similarities are strong

Probab=100.00  E-value=4.6e-96  Score=775.17  Aligned_cols=378  Identities=40%  Similarity=0.596  Sum_probs=264.7

Q ss_pred             CCCcccchhhHHHHHHhhhhhccCCCchhhhhHHHHHHHHhcCChHHHHHHHHHHHHhhccccc----ccCCCCCCCCCC
Q 038235           46 KRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVI----SLNSDGKIRTQT  121 (514)
Q Consensus        46 kk~~VLdED~Y~eaLs~II~RDFFPdL~klraQ~EYLdAles~D~~~ir~a~~k~~~r~~~~~~----~~~~~~~~~~~~  121 (514)
                      ++++|||||+||++||+||||||||||+|||+|+||||||++||++||++|+++|.+.++....    ++   ++..   
T Consensus         1 r~~~vL~Ed~Y~~~l~~II~RDfFPdL~~l~~q~eyLeA~es~D~~~ir~~~~k~~~~~~~~~~~~~~tp---~~~~---   74 (414)
T PF09751_consen    1 RKQKVLDEDEYTEALSKIIQRDFFPDLPKLRAQNEYLEALESNDPERIREAQRKLSSRMRKSSRRSSPTP---GRFR---   74 (414)
T ss_pred             CCCccccHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccCCCCcCCCCC---CccC---
Confidence            5789999999999999999999999999999999999999999999999999999875532221    11   1111   


Q ss_pred             CCCCcccCCCCCCCC--------CCCcCCCCCCCCccCCCC----C----ccCCCCCCCCCCCCHHHHhhhcCCchhHHH
Q 038235          122 ETPGSTFARNFTPFD--------EFDVNITTPKVGVELSGE----G----VCRDGTDEVDVSMRLDEFLRKHTSEDNDSF  185 (514)
Q Consensus       122 ~TP~s~~~~~~tp~~--------eTp~~~~~~~~~~~~~~~----~----~~~~~~~~~d~~lSLD~F~akYTSEDNaSF  185 (514)
                       ||........++..        .||..   ..++++.+..    .    ........++++||||+||+|||||||+||
T Consensus        75 -tp~~~~~~~~~~~~~~~~~~~~~tp~~---~~~dtp~s~~~~~~~~~~~~~~~~~~~~~~~lSLD~F~akYTSEDNaSF  150 (414)
T PF09751_consen   75 -TPSSSSGTPSTPPPSTPSTPGDNTPSG---WGGDTPMSSASSATSDDEEGKGKKKKNYDTNLSLDAFQAKYTSEDNASF  150 (414)
T ss_pred             -CCcccccCCCCCCCCCCCCCCCCCCcc---cCCCCCCCccccccccccccccccccccccCCCHHHHHhhccchhHHHH
Confidence             22100000001111        11110   0111111111    0    011223356899999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhHHhhhccccccccchHhh---hhhccccCCC----CCCCCCCCCccCcCCCCCcccccCCCCCCC
Q 038235          186 SKILEKVNRKRKERYQFLLEGEKRDNNNLIEDV---KKDRITDGYG----TSYQPPSTLEGWKYTAKNLLMYHPADCGEA  258 (514)
Q Consensus       186 ~eIlek~n~KrreKyaWl~~~ek~~~~~lie~~---kr~~i~~~~~----~~d~rpa~~d~WkykakNsLMf~Pd~~~~~  258 (514)
                      ++|||++|+|+++||+|||+.+..++ +.|+..   ......++.+    ..+.+|+.+|+|+|+++|+|||+|++++..
T Consensus       151 ~eIle~~n~krreKyaWl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~rp~~~d~W~~k~rN~LMf~P~~~~~~  229 (414)
T PF09751_consen  151 EEILEKQNQKRREKYAWLYDNEKESN-RRLAQQLALPSIEEQDKAGIRSLAIEDRPAAPDTWKYKARNSLMFPPDGVEDT  229 (414)
T ss_pred             HHHHHHHHHHHHHHhHHHHhcccccH-HHHHHHhhcchhhhhhccccchhhhhcCCCCCccccccccccccccCCCCccc
Confidence            99999999999999999999544443 444321   1111222222    234688999999999999999999998766


Q ss_pred             CCCHHHHHHHhhcCCCceeccCCCCCC---CCCCCCCCCCCcccccccccCCCCCCCcccccccccccchhhhhhcCCCC
Q 038235          259 PLTEEEQAVRLKGLTKEINKTNTRFHG---KIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKTPNR  335 (514)
Q Consensus       259 ~~t~~e~~e~~~~~pk~I~~~NTR~~~---~~~~~~~~~~~~~~~~~~~~a~~sp~~~~~rd~~~~k~~d~~~~~~tp~~  335 (514)
                      .....+.......+||+|+|+||||+.   ......+.               +++.+.+.+++++..+-...     ..
T Consensus       230 ~~e~~~~~~~~~~~pk~I~~~NTR~p~~~~~~~~~~~~---------------s~s~s~i~~a~~~~~~~~~~-----~~  289 (414)
T PF09751_consen  230 PHETIEQKARAPSPPKEIVHANTRFPESTPDESNSFPP---------------SPSRSAIDDAIAGRPRPKDS-----EV  289 (414)
T ss_pred             ccchhhhhhhcccCcccccccccCCccccccccCCCCC---------------CcCHHHHHHHHhcCCccCcc-----cc
Confidence            333223222222368999999999952   11111111               11222222222222110000     00


Q ss_pred             ccccCC----CcccCccccccCCCCCCCCCCCCccccccccCcccccCCCCCcccCCCCCCCCCccCCCCChhHHHHHHH
Q 038235          336 FYVESG----KKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHEL  411 (514)
Q Consensus       336 ~~~~s~----~p~vnGY~fV~TPsp~PGvd~SPlMTWGeIegTP~rLd~~dtp~~~~~~~~gp~FkIpe~~~RE~La~~L  411 (514)
                      .+.++.    +|+||||+||+||+|+|||++|||||||+|+|||||||++|||+.+++.+.||+|+||++++||+|||+|
T Consensus       290 ~~~g~egk~~tP~vnGy~fV~tpsp~Pg~~~sPlmTWG~i~~TP~~Ld~~~tp~~~~~~~~~p~FkI~e~~~RE~la~~L  369 (414)
T PF09751_consen  290 AATGSEGKELTPRVNGYSFVDTPSPAPGVDESPLMTWGEIEGTPLRLDGSDTPLDIGGDSTGPPFKIPEPSKREKLAHRL  369 (414)
T ss_pred             ccccccccccCCCCCCccccCCCCCCCCCCCCCccccccccCCccccccCCCccccccCCCCCcccCCCCCHHHHHHHHH
Confidence            000112    7999999999999999999999999999999999999999999998777899999999999999999999


Q ss_pred             HHHHH-HHHHHhhcccC-CCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 038235          412 SREAS-RKLKERSKMFQ-KPPLPSPYRAGSASPSGKLLSPAAQKF  454 (514)
Q Consensus       412 a~~as-~k~R~k~~~~~-~~~~~sp~r~~~~sP~~~~LSPAAqRL  454 (514)
                      +++|+ +|+|+|+.++. +....||.++++++|++.+||||||||
T Consensus       370 ~~k~a~~k~r~k~~~~~~~~~~~sp~~~~~s~~~~~~LSPAAqrL  414 (414)
T PF09751_consen  370 ADKAARKKRREKARGATAKRNSSSPVPRFPSSPRLSSLSPAAQRL  414 (414)
T ss_pred             HHHHHHhhhHhhhhhhccCCCCCCCCCCCCCCCCcccCCHHHhcC
Confidence            99999 88888886555 445567778888899988999999998

Apart from a predicted coiled-coil domain, no other known functional domains have been characterised. May be involved in pre-mRNA splicing and has been associated with the spliceosome C complex. The protein appears to be expressed in the nucleus, particularly in the pons sub-region of the brain. It is clearly necessary for normal development of the nervous system [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	514
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 2e-07
 Identities = 72/561 (12%), Positives = 145/561 (25%), Gaps = 207/561 (36%)

Query: 8   SPRHLASPSPSPSQSSFPESYLTNVNNSASATQK--VP-PKKRAKV------LDEDTYVS 58
           SP       PS     +       + N      K  V   +   K+      L     V 
Sbjct: 96  SPIKTEQRQPSMMTRMY-IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154

Query: 59  ------------AIESIIERDYFPDLSKLRDRYE----WLQATRTGDPVQIRDAQLKIME 102
                       A++      Y     K++ + +    WL       P  + +   K++ 
Sbjct: 155 IDGVLGSGKTWVALDVC--LSY-----KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 103 RRGKKVISL-NSDGKIRTQTETPGSTFARNFTP------------------FDEFDVN-- 141
           +      S  +    I+ +  +  +   R                      ++ F+++  
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267

Query: 142 --ITTPKVGVELSGEGVCRDGTDEVDVSMR----LDEFLRKHTSEDNDS-FSKILEKVNR 194
             +TT    V           TD +  +      LD      T ++  S   K L   + 
Sbjct: 268 ILLTTRFKQV-----------TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL---DC 313

Query: 195 KRKERYQFLLEGEKRDNN----NLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLL-- 248
           + ++     L  E    N    ++I +  +D             +T + WK+   + L  
Sbjct: 314 RPQD-----LPREVLTTNPRRLSIIAESIRDG-----------LATWDNWKHVNCDKLTT 357

Query: 249 ----------------MYH-----PADC-----------GEAPLTEEEQAVRL---KGLT 273
                           M+      P               +   ++    V       L 
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Query: 274 KEINKTNT-RFHGKIMDSRPNDDGTVEV------LYTPVAGTTPGPVFDRDGDKMKKYDL 326
           ++  K +T       ++ +   +    +       Y                +  K +D 
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY----------------NIPKTFDS 461

Query: 327 EDMRKTPNRFYVES--G---KKAENG------------YSFVK-------TPSPAPGADE 362
           +D+       Y  S  G   K  E+             + F++       T   A G+  
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521

Query: 363 S---------PFITWGEIEGTPLRLETEDTPIDIGGSGDGPHF------KIPSAPTRDVM 407
           +         P+I   + +    RL        I        F       +  +   D++
Sbjct: 522 NTLQQLKFYKPYIC--DNDPKYERLVN-----AIL------DFLPKIEENLICSKYTDLL 568

Query: 408 AHELSREASRKLKERSKMFQK 428
              L  E     +E  K  Q+
Sbjct: 569 RIALMAEDEAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 4e-05
 Identities = 59/455 (12%), Positives = 128/455 (28%), Gaps = 129/455 (28%)

Query: 61  ESIIERDYFPDLSKLRDRYEWLQ---ATRTGDPVQIRDAQLKIMER-------------- 103
           E ++++ +  ++  LR  Y++L     T    P  +    ++  +R              
Sbjct: 76  EEMVQK-FVEEV--LRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132

Query: 104 RGKKVISLNSDGKIRTQTETPG-----------STFA----RNFTPFDEFDVNITTPKVG 148
           R +  + L     +                   +  A     ++    + D  I    + 
Sbjct: 133 RLQPYLKLRQ--ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL- 189

Query: 149 VELSGEGVCRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEK 208
                   C      +++  +L   +  + +  +D  S I  +++   +   + LL+  K
Sbjct: 190 ------KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH-SIQAELRRLLK-SK 241

Query: 209 RDNNNLI--EDVKKDRITDGYG-------TSYQPPSTLEGWKYTAKNLLMYHPADCGEAP 259
              N L+   +V+  +  + +        T+     T      T  ++ + H +      
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM----T 297

Query: 260 LTEEEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPV------ 313
           LT +E         K +         K +D RP D      L  P    T  P       
Sbjct: 298 LTPDE--------VKSL------L-LKYLDCRPQD------L--PREVLTTNPRRLSIIA 334

Query: 314 -FDRDG----DKMKKYDLEDMRKTPNRFYVESGKKAENGYSF---------VKTPSPAPG 359
              RDG    D  K  + + +        +   + AE    F            P+    
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393

Query: 360 ADESPFITWGEIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRD-----VMAHELSRE 414
                 + W ++         +   + +            S   +      +    +  E
Sbjct: 394 ------LIWFDVI--------KSDVMVVVN-----KLHKYSLVEKQPKESTISIPSIYLE 434

Query: 415 ASRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSP 449
              KL+    + +   +   Y       S  L+ P
Sbjct: 435 LKVKLENEYALHRS--IVDHYNIPKTFDSDDLIPP 467

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00