Citrus Sinensis ID: 038292


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIEHIQD
cccccccccccccccEEEEEEccccccEEEEEccEEEEEcccccEEEEEcccHHHccccEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHccccccccccccccccccc
cccccccccccccccEEEEEcccccccEEEEEcccEEEccccccEEEEEcccEEEEEEEEEEEEEccccccEEEcccHHHcccccccccccccHHHHHHHHHHcccccHHHHHHEEEccccc
pekvvglsthsdDSALAILLEINeveglqikkdgkwihitpfpnafVVNVGNVLETHWRLSIGTIYSvrydgemypasnlvsentpplfkrVTVEEYFGNLCarklrgkshLDALRIEHIQD
pekvvglsthsddsaLAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLcarklrgkshldalriehiqd
PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIEHIQD
**************ALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDAL*******
PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIE****
**********SDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIEHIQD
**KVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIEH***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIEHIQD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query122 2.2.26 [Sep-21-2011]
Q39224358 Protein SRG1 OS=Arabidops no no 0.959 0.326 0.451 5e-27
D4N502360 Codeine O-demethylase OS= N/A no 0.959 0.325 0.459 4e-26
D4N501364 Probable 2-oxoglutarate/F N/A no 0.959 0.321 0.455 6e-25
D4N500364 Thebaine 6-O-demethylase N/A no 0.934 0.313 0.438 2e-23
A2A1A0352 S-norcoclaurine synthase N/A no 0.918 0.318 0.374 2e-15
Q9LTH8364 1-aminocyclopropane-1-car no no 0.950 0.318 0.340 3e-14
Q9LTH7366 1-aminocyclopropane-1-car no no 0.950 0.316 0.318 7e-13
Q8H1S4369 1-aminocyclopropane-1-car no no 0.950 0.314 0.302 2e-12
P93821345 1-aminocyclopropane-1-car no no 0.950 0.336 0.304 6e-12
P31237319 1-aminocyclopropane-1-car N/A no 0.893 0.341 0.292 5e-11
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  119 bits (298), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 18/135 (13%)

Query: 1   PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET---- 56
           P++V+GL+ HSD   L +L+++N+VEGLQIKKDGKW+ + P PNAF+VN+G+VLE     
Sbjct: 224 PDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNG 283

Query: 57  --------------HWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLC 102
                           RLSI T ++V    E+ PA +LV       FKR+T++EY   L 
Sbjct: 284 TYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLF 343

Query: 103 ARKLRGKSHLDALRI 117
           +R L GK++LDALRI
Sbjct: 344 SRTLDGKAYLDALRI 358





Arabidopsis thaliana (taxid: 3702)
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|P93821|ACCH7_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 7 OS=Arabidopsis thaliana GN=At1g04380 PE=1 SV=1 Back     alignment and function description
>sp|P31237|ACCO_ACTDE 1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
255575141 364 Leucoanthocyanidin dioxygenase, putative 0.975 0.326 0.518 2e-35
356556862 353 PREDICTED: protein SRG1-like [Glycine ma 0.975 0.337 0.532 1e-32
255634602 237 unknown [Glycine max] 0.975 0.502 0.532 1e-32
224061381 359 predicted protein [Populus trichocarpa] 0.991 0.337 0.510 1e-32
224148314151 predicted protein [Populus trichocarpa] 0.991 0.801 0.510 1e-32
358348748 359 Protein SRG1 [Medicago truncatula] gi|35 0.975 0.331 0.489 4e-31
358348744201 Protein SRG1 [Medicago truncatula] gi|35 0.975 0.592 0.496 7e-31
224061385 355 predicted protein [Populus trichocarpa] 0.959 0.329 0.511 9e-31
255575133 317 Naringenin,2-oxoglutarate 3-dioxygenase, 0.959 0.369 0.488 1e-30
255557477 363 Flavonol synthase/flavanone 3-hydroxylas 1.0 0.336 0.457 7e-30
>gi|255575141|ref|XP_002528475.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223532084|gb|EEF33892.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/137 (51%), Positives = 96/137 (70%), Gaps = 18/137 (13%)

Query: 1   PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLE----- 55
           PEKV+GL+ HSD + L ILL++N+VEGLQIKKDGKW+ + P PNAFV+N+G++LE     
Sbjct: 225 PEKVIGLTPHSDGTGLTILLQVNDVEGLQIKKDGKWVPVKPLPNAFVINIGDILEIITNG 284

Query: 56  -------------THWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLC 102
                           RLSI + +S RYDGE++PA +L++  TP  F+RVTV+E+F  L 
Sbjct: 285 IYRSILHRATVNSQQKRLSIASFHSPRYDGEIFPAPSLITAQTPSRFRRVTVQEFFKGLF 344

Query: 103 ARKLRGKSHLDALRIEH 119
           +R+LR KS+LD LRIEH
Sbjct: 345 SRELRAKSYLDTLRIEH 361




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556862|ref|XP_003546739.1| PREDICTED: protein SRG1-like [Glycine max] Back     alignment and taxonomy information
>gi|255634602|gb|ACU17663.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224061381|ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|222847709|gb|EEE85256.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224148314|ref|XP_002336631.1| predicted protein [Populus trichocarpa] gi|222836386|gb|EEE74793.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|358348748|ref|XP_003638405.1| Protein SRG1 [Medicago truncatula] gi|355504340|gb|AES85543.1| Protein SRG1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|358348744|ref|XP_003638403.1| Protein SRG1 [Medicago truncatula] gi|355504338|gb|AES85541.1| Protein SRG1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224061385|ref|XP_002300453.1| predicted protein [Populus trichocarpa] gi|222847711|gb|EEE85258.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255575133|ref|XP_002528471.1| Naringenin,2-oxoglutarate 3-dioxygenase, putative [Ricinus communis] gi|223532080|gb|EEF33888.1| Naringenin,2-oxoglutarate 3-dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255557477|ref|XP_002519769.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223541186|gb|EEF42742.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.549 0.185 0.528 3e-24
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.565 0.195 0.555 2.9e-17
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.565 0.192 0.513 6.9e-17
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.565 0.193 0.541 3.3e-16
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.442 0.148 0.454 6.7e-16
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.442 0.155 0.472 4.9e-15
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.450 0.154 0.6 5.8e-14
TAIR|locus:2154744349 AT5G54000 [Arabidopsis thalian 0.450 0.157 0.472 1.2e-13
TAIR|locus:2149214348 AT5G20400 [Arabidopsis thalian 0.450 0.158 0.436 1.3e-13
TAIR|locus:2009175369 AT1G06650 [Arabidopsis thalian 0.442 0.146 0.363 1.9e-13
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 183 (69.5 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
 Identities = 37/70 (52%), Positives = 48/70 (68%)

Query:     1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETHWRL 60
             P  V GL  HSD   L ILL++NEV+GLQIKK+GKW  + P  NAF+VNVG+VLE    +
Sbjct:   224 PNLVTGLIPHSDAVGLTILLQVNEVDGLQIKKNGKWFFVKPLQNAFIVNVGDVLEI---I 280

Query:    61 SIGTIYSVRY 70
             + GT  S+ +
Sbjct:   281 TNGTYRSIEH 290


GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009686 "gibberellin biosynthetic process" evidence=RCA
GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154744 AT5G54000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149214 AT5G20400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009175 AT1G06650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00012789
hypothetical protein (359 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
PLN02216357 PLN02216, PLN02216, protein SRG1 9e-41
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 9e-25
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-23
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-20
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-18
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 3e-17
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 8e-17
PLN02947374 PLN02947, PLN02947, oxidoreductase 8e-17
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 8e-16
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-13
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 7e-13
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 7e-13
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-12
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-11
PLN02904357 PLN02904, PLN02904, oxidoreductase 6e-11
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 6e-10
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-09
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-09
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 8e-09
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 1e-07
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-07
PLN02997325 PLN02997, PLN02997, flavonol synthase 8e-07
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-06
PLN02485329 PLN02485, PLN02485, oxidoreductase 6e-06
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 4e-04
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 0.001
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
 Score =  138 bits (348), Expect = 9e-41
 Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 18/135 (13%)

Query: 1   PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET---- 56
           P++V+GL+ HSD   L ILL++NEVEGLQIKKDGKW+ + P PNA VVNVG++LE     
Sbjct: 223 PDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNG 282

Query: 57  --------------HWRLSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLC 102
                           RLS+ T ++     E+ PA +LV      LFK +T +EYF  L 
Sbjct: 283 TYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLF 342

Query: 103 ARKLRGKSHLDALRI 117
           +R+L GK++LDA+RI
Sbjct: 343 SRELDGKAYLDAMRI 357


Length = 357

>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 122
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02904357 oxidoreductase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN02997325 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.97
PLN02403303 aminocyclopropanecarboxylate oxidase 99.97
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 99.94
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.73
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 94.29
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 93.99
>PLN02216 protein SRG1 Back     alignment and domain information
Probab=100.00  E-value=4.7e-38  Score=247.79  Aligned_cols=117  Identities=53%  Similarity=0.889  Sum_probs=111.1

Q ss_pred             CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292            1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI   62 (122)
Q Consensus         1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si   62 (122)
                      |+.++|+++|||+|+||||+|+++++||||+++|+|++|+|++|+|||||||+||+                  ++|||+
T Consensus       223 ~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si  302 (357)
T PLN02216        223 PDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSV  302 (357)
T ss_pred             cccccCccCcccCceEEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEE
Confidence            45689999999999999999965799999999999999999999999999999998                  789999


Q ss_pred             EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceecc
Q 038292           63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRI  117 (122)
Q Consensus        63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i  117 (122)
                      +||++|+.|++|+|+++|+++++|++|++++++||+..++++...+++.++.+||
T Consensus       303 ~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        303 ATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             EEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            9999999999999999999999999999999999999999999999999999886



>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-09
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-06
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-06
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-06
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure

Iteration: 1

Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 21/130 (16%) Query: 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET---- 56 P+ + GL H+D + +L + ++V GLQ+ KDG+WI + P ++ VVN+G+ LE Sbjct: 168 PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPXRHSIVVNLGDQLEVITNG 227 Query: 57 --------------HWRLSIGTIYSVRYDGEMYPASNLV---SENTPPLFKRVTVEEYFG 99 R S+ + Y+ D +YPA LV +E ++ + ++Y Sbjct: 228 KYKSVXHRVIAQKDGARXSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYXK 287 Query: 100 NLCARKLRGK 109 K + K Sbjct: 288 LYAGLKFQAK 297
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 3e-38
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-37
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 6e-19
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-17
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-12
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-11
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  130 bits (328), Expect = 3e-38
 Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 22/139 (15%)

Query: 1   PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLE----- 55
           P+ + GL  H+D   + +L + ++V GLQ+ KDG+WI + P  ++ VVN+G+ LE     
Sbjct: 168 PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNG 227

Query: 56  -------------THWRLSIGTIYSVRYDGEMYPASNLV---SENTPPLFKRVTVEEYFG 99
                           R+S+ + Y+   D  +YPA  LV   +E    ++ +   ++Y  
Sbjct: 228 KYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMK 287

Query: 100 NLCARKLRGKS-HLDALRI 117
                K + K    +A++ 
Sbjct: 288 LYAGLKFQAKEPRFEAMKA 306


>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 99.97
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 99.95
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 90.51
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 86.07
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
Probab=100.00  E-value=4.8e-37  Score=237.63  Aligned_cols=118  Identities=30%  Similarity=0.637  Sum_probs=104.5

Q ss_pred             CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292            1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI   62 (122)
Q Consensus         1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si   62 (122)
                      |+.++|+++|||+|+||||+||++++||||+++|+|++|+|.||+|||||||+||+                  ++|||+
T Consensus       168 ~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Si  247 (319)
T 1w9y_A          168 PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSL  247 (319)
T ss_dssp             GGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEE
T ss_pred             cccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEE
Confidence            35678999999999999999965799999999999999999999999999999998                  689999


Q ss_pred             EEEeecCCCeEEecCCCccCCC---CCCCCCCccHHHHHHHHHhcccCCccc-cceeccc
Q 038292           63 GTIYSVRYDGEMYPASNLVSEN---TPPLFKRVTVEEYFGNLCARKLRGKSH-LDALRIE  118 (122)
Q Consensus        63 ~~F~~p~~d~~i~pl~~~v~~~---~p~~y~~~~~~e~~~~~~~~~~~g~~~-ld~~~i~  118 (122)
                      +||++|+.|++|+|+++|++++   +|++|++++++||+..++++.+.|+.. ++.+|+.
T Consensus       248 a~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~  307 (319)
T 1w9y_A          248 ASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM  307 (319)
T ss_dssp             EEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred             EEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence            9999999999999999999987   599999999999999999888888765 6777765



>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 122
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-13
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-12
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-04
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 0.001
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
 Score = 61.9 bits (149), Expect = 4e-13
 Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 24/130 (18%)

Query: 3   KVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLETH----- 57
             +G+  H+D  +    +  N V GLQ+  +GKW+     P++ V+++G+ LE       
Sbjct: 224 LALGVEAHTD-VSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKY 282

Query: 58  -------------WRLSIGTIYSVRYDGEMY-PASNLVSENTPPLFKRVTVEEYFGNLCA 103
                         R+S         D  +  P   +VS  +P  F   T  ++      
Sbjct: 283 KSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHI----E 338

Query: 104 RKLRGKSHLD 113
            KL GK   +
Sbjct: 339 HKLFGKEQEE 348


>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 99.98
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 99.94
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 82.81
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]
Probab=100.00  E-value=5e-36  Score=227.57  Aligned_cols=115  Identities=30%  Similarity=0.652  Sum_probs=100.4

Q ss_pred             CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeEE
Q 038292            2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSIG   63 (122)
Q Consensus         2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si~   63 (122)
                      +...|+++|||+|+||||+|++.++||||.++|+|++|+|.+|++|||+||+||+                  .+||||+
T Consensus       168 ~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~~~~R~Si~  247 (307)
T d1w9ya1         168 DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLA  247 (307)
T ss_dssp             GGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEE
T ss_pred             ccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCceeecCCCCCcEEEE
Confidence            5567999999999999999976789999999999999999999999999999998                  7899999


Q ss_pred             EEeecCCCeEEecCCCccC---CCCCCCCCCccHHHHHHHHHhcccCCcc-ccceec
Q 038292           64 TIYSVRYDGEMYPASNLVS---ENTPPLFKRVTVEEYFGNLCARKLRGKS-HLDALR  116 (122)
Q Consensus        64 ~F~~p~~d~~i~pl~~~v~---~~~p~~y~~~~~~e~~~~~~~~~~~g~~-~ld~~~  116 (122)
                      ||++|+.|++|+|+++|++   .++|++|++++++||++.+.+.++.++. .++.+|
T Consensus       248 ~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~  304 (307)
T d1w9ya1         248 SFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMK  304 (307)
T ss_dssp             EEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHH
T ss_pred             EEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCCcccHHHHHhh
Confidence            9999999999999999986   4578999999999999998888877755 355443



>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure