Citrus Sinensis ID: 038352

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MSDRVFPSSKPAANGNGTVSAAAPPPVKPPLRPPYRPQPHARRHHRPRRSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccEEEEEEEEEEEEEEcccccccccEEEEEEEEEEEEEccccEEEEEEEccEEEEEEcccEEEEEEEccccccccccEEEEEEEEEEccEEccHHHHHHHHHHHccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccEEEcccccccccEEEEcccccEEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccccccccccccEEEEEEEEEccccEEEEEEcccEEEEEEEccEEEccccccccccccccEEEEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEcEEEEEEEEcEEEEccccccccccEEEEccccEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
msdrvfpsskpaangngtvsaaapppvkpplrppyrpqpharrhhrprrsyrccccFWTILVILILALLAAIAATALYVLyrphrpefsvpslrlhrlnltssadsstNHVATLLNFTvtsknpnshitfyydpfvisalsssdvflgngtvpgffsdkknqTFLKNVVVSgsidldtdsVKSLKSdlkkkngvslkiKLDTKVKVKvgklsskkvgiRVTCEGFraalpkgktpsvatvdkskckvdlRIKIWKFTF
Flexible Loop (DISEMBL)
msdrvfpsskpaangngtvsaaapppvkppLRPPYRPqpharrhhrprrSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLtssadsstnHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPgffsdkknqTFLKNVVVsgsidldtdsvkslksdlkkkngvslkikldtkvkvkvgklsskkvgirvtcegfraalpkgktpsvatvdkskckvdlrikiwkftf
Low Complexity Region (SEG)
MSDRVFPSSKPAANGNGTVSaaapppvkpplrppyrpqpharrhhrprrsyrCCCCFWtilvililallaaiaatalyvlyRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIdldtdsvkslksdlkkkNGVSLKIKLDTkvkvkvgklsskkvgIRVTCEGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF
Disordered region (IsUnstruct)
*************************************************SYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNL********NHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLD***************GVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKF**
Disordered Region (DISOPRED)
***************************************************RCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPG************NVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAA***************KCKVDLRIKIWKFTF
Disordered Region (DISEMBL)
***********AANGNGTVSAAAPPPVKPPLRPPYR************RSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF
Disordered Region (DISPRO)
**************************VKPPLRPPYRPQPHARRHHRPRRSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSDRVFPSSKPAANGNGTVSAAAPPPVKPPLRPPYRPQPHARRHHRPRRSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
Q8VZ13	221	Uncharacterized protein A	no	no	0.538	0.628	0.193	0.0006

>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/145 (19%), Positives = 68/145 (46%), Gaps = 6/145 (4%)

Query: 78  YVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVI 137
           Y+  RP R  ++V +  +    + ++ D    H+    ++ + S NP  H++  Y    I
Sbjct: 59  YLTLRPKRLIYTVEAASVQEFAIGNNDD----HINAKFSYVIKSYNPEKHVSVRYHSMRI 114

Query: 138 SALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLK 197
           S  +  +  + +  +  F    KN+T ++  +VS ++ L   + + L+++ K K  + ++
Sbjct: 115 ST-AHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAE-KSKGTIEME 172

Query: 198 IKLDTKVKVKVGKLSSKKVGIRVTC 222
           + +  +V  K     S++  ++  C
Sbjct: 173 VYITARVSYKTWIFRSRRRTLKAVC 197

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
224142896	276	predicted protein [Populus trichocarpa]	1.0	0.934	0.612	2e-76
224092190	276	predicted protein [Populus trichocarpa]	1.0	0.934	0.626	4e-76
118484234	276	unknown [Populus trichocarpa]	1.0	0.934	0.623	7e-76
356514629	256	PREDICTED: protein NDR1-like [Glycine ma	0.972	0.980	0.585	1e-71
356506977	256	PREDICTED: protein NDR1-like [Glycine ma	0.957	0.964	0.581	2e-70
255550778	272	conserved hypothetical protein [Ricinus	1.0	0.948	0.625	4e-67
357465739	260	hypothetical protein MTR_3g104460 [Medic	0.953	0.946	0.536	1e-66
388510804	260	unknown [Medicago truncatula]	0.953	0.946	0.528	2e-65
449447337	259	PREDICTED: uncharacterized protein LOC10	0.957	0.953	0.580	3e-64
224134571	266	predicted protein [Populus trichocarpa]	0.961	0.932	0.471	8e-62

>gi|224142896|ref|XP_002324769.1| predicted protein [Populus trichocarpa] gi|118482835|gb|ABK93333.1| unknown [Populus trichocarpa] gi|118486784|gb|ABK95227.1| unknown [Populus trichocarpa] gi|222866203|gb|EEF03334.1| predicted protein [Populus trichocarpa]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 169/276 (61%), Positives = 208/276 (75%), Gaps = 18/276 (6%)

Query: 1   MSDRVFPSSKPAANGNGTVSA----AAPPPV--------KPPLRPPYRPQPHARRHH-RP 47
           MS++VFPSSKPA NG  T +     + PP           P  R PYRPQPH RRH  R 
Sbjct: 1   MSEKVFPSSKPATNGTATANTTTTASNPPNATANKSHLYNPTSRLPYRPQPHTRRHRSRS 60

Query: 48  RRSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSS 107
            R+  CCCCFWTIL IL+L LLAAIA TALY+LYRPHRP F++ SLR+HRLNLT+SADSS
Sbjct: 61  GRNICCCCCFWTILTILLLLLLAAIAGTALYILYRPHRPTFTITSLRIHRLNLTTSADSS 120

Query: 108 TNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSD-VFLGNGTVPGFFSDKKNQTFLK 166
            +H++TLLN T+ S+NPNSHI+  Y+PF +SALS  + VFLGNG++P F   KKNQT  +
Sbjct: 121 ISHLSTLLNLTIISENPNSHISLDYEPFTVSALSDGNGVFLGNGSLPAFSLSKKNQTSFR 180

Query: 167 NVVVSGSIDLDTDSVKSLKSDLKKK----NGVSLKIKLDTKVKVKVGKLSSKKVGIRVTC 222
           NVVVSGS DLD D++ SL+SDLKKK      V LKI++DT+VK+KVG L +K+VGIRVTC
Sbjct: 181 NVVVSGSNDLDVDALNSLRSDLKKKKSADGSVMLKIEMDTRVKMKVGGLKTKEVGIRVTC 240

Query: 223 EGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF 258
           +G + ++PKGKTP+VA   KSKCKVDLRIKIW++TF
Sbjct: 241 DGIKGSIPKGKTPTVAVTTKSKCKVDLRIKIWRWTF 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092190|ref|XP_002309501.1| predicted protein [Populus trichocarpa] gi|222855477|gb|EEE93024.1| predicted protein [Populus trichocarpa]

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 173/276 (62%), Positives = 206/276 (74%), Gaps = 18/276 (6%)

Query: 1   MSDRVFPSSKPAANGNGTVSAAAPPPV------------KPPLRPPYRPQPHARRHH-RP 47
           MSD+VFPSSKPAANG  T                      P  R PYRPQPH RRH  R 
Sbjct: 1   MSDKVFPSSKPAANGTATNPTTTTTNNPPPATTNKSHLYNPTSRLPYRPQPHTRRHRSRS 60

Query: 48  RRSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSS 107
            R+  CCCCFWTIL IL+L LLAAIA  ALY+LYRPHRP F++ SLR+HRLNLT+S DSS
Sbjct: 61  GRNICCCCCFWTILTILLLLLLAAIAGAALYILYRPHRPSFTITSLRIHRLNLTTSPDSS 120

Query: 108 TNHVATLLNFTVTSKNPNSHITFYYDPFVISALS-SSDVFLGNGTVPGFFSDKKNQTFLK 166
           ++H++TL N T+ SKNPNSHI+  Y+PF +SALS  +DVFLGNGT+P F   KKNQT  +
Sbjct: 121 SSHLSTLFNLTIISKNPNSHISLDYEPFTVSALSDGNDVFLGNGTLPAFSLSKKNQTSFR 180

Query: 167 NVVVSGSIDLDTDSVKSLKSDLKKK---NG-VSLKIKLDTKVKVKVGKLSSKKVGIRVTC 222
           NVVVSGS DLD D+V SL+SDLKKK   NG V LKI++DTKVK+KVG L +KKVGIRVTC
Sbjct: 181 NVVVSGSNDLDVDAVNSLRSDLKKKKSENGSVMLKIEMDTKVKMKVGGLKTKKVGIRVTC 240

Query: 223 EGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF 258
           +G + ++PKGKTP+VA   KS+CKVDLRIKIW++TF
Sbjct: 241 DGIKGSIPKGKTPTVAVTAKSECKVDLRIKIWRWTF 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484234|gb|ABK93997.1| unknown [Populus trichocarpa]

 Score =  289 bits (740), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 172/276 (62%), Positives = 206/276 (74%), Gaps = 18/276 (6%)

Query: 1   MSDRVFPSSKPAANGNGTVSAAAPPPV------------KPPLRPPYRPQPHARRHH-RP 47
           MSD+VFPSS+PAANG  T                      P  R PYRPQPH RRH  R 
Sbjct: 1   MSDKVFPSSEPAANGTATNPTTTTTNNPPPATTNKSHLYNPTSRLPYRPQPHTRRHRSRS 60

Query: 48  RRSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSS 107
            R+  CCCCFWTIL IL+L LLAAIA  ALY+LYRPHRP F++ SLR+HRLNLT+S DSS
Sbjct: 61  GRNICCCCCFWTILTILLLLLLAAIAGAALYILYRPHRPSFTITSLRIHRLNLTTSPDSS 120

Query: 108 TNHVATLLNFTVTSKNPNSHITFYYDPFVISALS-SSDVFLGNGTVPGFFSDKKNQTFLK 166
           ++H++TL N T+ SKNPNSHI+  Y+PF +SALS  +DVFLGNGT+P F   KKNQT  +
Sbjct: 121 SSHLSTLFNLTIISKNPNSHISLDYEPFTVSALSDGNDVFLGNGTLPAFSLSKKNQTSFR 180

Query: 167 NVVVSGSIDLDTDSVKSLKSDLKKK---NG-VSLKIKLDTKVKVKVGKLSSKKVGIRVTC 222
           NVVVSGS DLD D+V SL+SDLKKK   NG V LKI++DTKVK+KVG L +KKVGIRVTC
Sbjct: 181 NVVVSGSNDLDVDAVNSLRSDLKKKKSENGSVMLKIEMDTKVKMKVGGLKTKKVGIRVTC 240

Query: 223 EGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF 258
           +G + ++PKGKTP+VA   KS+CKVDLRIKIW++TF
Sbjct: 241 DGIKGSIPKGKTPTVAVTAKSECKVDLRIKIWRWTF 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514629|ref|XP_003526008.1| PREDICTED: protein NDR1-like [Glycine max]

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/263 (58%), Positives = 193/263 (73%), Gaps = 12/263 (4%)

Query: 1   MSDRVFPSSKPAANGNGTVSAAAPPPVKPPLRPP----YRPQPH-ARRHHRPRRSYRCCC 55
           MSD   P+SKP+ NG    +   P PVK  L  P    YRPQ H  RR  R  R+  CCC
Sbjct: 1   MSD---PASKPSGNG-AAATNGNPGPVKSQLYNPNRQVYRPQSHYHRRGQRSHRNLCCCC 56

Query: 56  CFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLL 115
           CFWTIL +L +ALLAAI   ALYVLYRPHRPEFSV +LR+ ++NLT+SADS + H+ TL 
Sbjct: 57  CFWTILTLLAVALLAAIVGAALYVLYRPHRPEFSVTNLRIAKMNLTTSADSPS-HLTTLF 115

Query: 116 NFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSID 175
           N T+ +KNPN+H+ F+YDPF ++ LS+S V +GNG+V  F SDK NQT L+  V+SGS D
Sbjct: 116 NLTLIAKNPNNHLVFFYDPFSVTVLSNS-VPVGNGSVTAFTSDKNNQTSLR-AVLSGSQD 173

Query: 176 LDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTP 235
           LDTDS+ SL+S LK K G  ++I++DTKVK+K+  L SKKVGIRVTC+G R  +P GKTP
Sbjct: 174 LDTDSLTSLRSGLKMKRGFPVEIQMDTKVKMKMDWLKSKKVGIRVTCDGIRGTVPSGKTP 233

Query: 236 SVATVDKSKCKVDLRIKIWKFTF 258
           +VA+V  S+CKVDLRIKIWKF+F
Sbjct: 234 AVASVVDSECKVDLRIKIWKFSF 256

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506977|ref|XP_003522249.1| PREDICTED: protein NDR1-like [Glycine max]

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/258 (58%), Positives = 190/258 (73%), Gaps = 11/258 (4%)

Query: 9   SKPAANGNGTVSAAA---PPPVKPPLRPP----YRPQPH-ARRHHRPRRSYRCCCCFWTI 60
           S PA+  NG  +AA    P PVK  L  P    YRPQ H  RR  R  R++ CCCCFWTI
Sbjct: 2   SDPASKPNGNAAAATNGNPGPVKSQLYNPNRQVYRPQSHYHRRGQRSHRNFCCCCCFWTI 61

Query: 61  LVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVT 120
           L +L +ALLAAI   ALYVLYRPHRPEFSV +LR+ ++NLT+SADS + H+ TL N T+ 
Sbjct: 62  LTLLAVALLAAIVGAALYVLYRPHRPEFSVTNLRIAKMNLTTSADSPS-HLTTLFNLTLI 120

Query: 121 SKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDS 180
           +KNPN+H+ F+YDPF ++  S+S V +GNG+V  F SDK NQT L+  V+SGS DLDTDS
Sbjct: 121 AKNPNNHLVFFYDPFSMTVFSNS-VPVGNGSVTAFTSDKNNQTSLR-AVLSGSQDLDTDS 178

Query: 181 VKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTPSVATV 240
           + SL+S LK K G  ++I++DTKVK+K+  L SKKVGIRVTC+G R  +P GK+P+VA+V
Sbjct: 179 LTSLRSGLKMKRGFPVEIQMDTKVKMKMDWLKSKKVGIRVTCDGIRGTVPSGKSPAVASV 238

Query: 241 DKSKCKVDLRIKIWKFTF 258
             S+CKVDLRIKIWKF+F
Sbjct: 239 VDSECKVDLRIKIWKFSF 256

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550778|ref|XP_002516437.1| conserved hypothetical protein [Ricinus communis] gi|223544257|gb|EEF45778.1| conserved hypothetical protein [Ricinus communis]

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 170/272 (62%), Positives = 204/272 (75%), Gaps = 14/272 (5%)

Query: 1   MSDRVFPSSKPAANGNGTVSAAAPPPVKPPLRPP-----YRPQPHARRHHRPRRSYR--- 52
           MSDRVFPSSKPA NG    +AA  P   PP         Y P        +PRR      
Sbjct: 1   MSDRVFPSSKPATNGGTATTAATTPAPNPPPPASNKSHLYNPTARPPYRPQPRRRRTRSG 60

Query: 53  ----CCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSST 108
               CCCCFWT+L IL+L LLAAIA  ALY+LYRPHRP FS+PSLR+HRLNLT+SADSS+
Sbjct: 61  RSICCCCCFWTLLAILLLILLAAIAGAALYILYRPHRPAFSIPSLRIHRLNLTTSADSSS 120

Query: 109 NHVATLLNFTVTSKNPNSHITFYYDPFVISALSS-SDVFLGNGTVPGFFSDKKNQTFLKN 167
           +HV+TLLN T+ SKNPNSH+TF+YD F IS+LSS  DVFLGNGT+P +   KKN+T  +N
Sbjct: 121 SHVSTLLNLTLISKNPNSHLTFFYDSFAISSLSSDGDVFLGNGTIPAYTLGKKNETSFRN 180

Query: 168 VVVSGSIDLDTDSVKSLKSDLKKKN-GVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFR 226
           VVVSGS DLD +SV +L+SDLKKK+ GV+LKI+LDTKVK+K+G L +KKVGIRVTC+G +
Sbjct: 181 VVVSGSNDLDAESVNALRSDLKKKSGGVALKIELDTKVKLKMGGLKTKKVGIRVTCDGIK 240

Query: 227 AALPKGKTPSVATVDKSKCKVDLRIKIWKFTF 258
             +PKGK+P+VA    SKCKVDLRIKIWK+TF
Sbjct: 241 GVVPKGKSPTVAVTSASKCKVDLRIKIWKWTF 272

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465739|ref|XP_003603154.1| hypothetical protein MTR_3g104460 [Medicago truncatula] gi|355492202|gb|AES73405.1| hypothetical protein MTR_3g104460 [Medicago truncatula]

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/263 (53%), Positives = 182/263 (69%), Gaps = 17/263 (6%)

Query: 7   PSSKPAANGNGTVSAAA-------PPPVKPPLRPP----YRPQPHARRHHRPRRSYRCCC 55
           P SKP  NGNG ++  A       P PVK  L  P    YRPQ + RR     RS  CCC
Sbjct: 4   PPSKP--NGNGAINGVAATNGNGNPAPVKSQLYNPNRQVYRPQQYNRRRRS-NRSLCCCC 60

Query: 56  CFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLL 115
           CFWTIL +L  A L AI     YVLY PH+P+FS+ +LR+ ++NL + ADS + H+ TL 
Sbjct: 61  CFWTILTVLAAAFLVAIVGAVFYVLYHPHQPQFSITNLRIAKMNLKTPADSPS-HLTTLF 119

Query: 116 NFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSID 175
           N T+ +KNPN+H+ F+Y+PF ++A S S V +GNG++P F S K NQT L++V+ S S D
Sbjct: 120 NLTLIAKNPNNHLVFFYEPFTVTAFSDS-VQIGNGSLPAFDSGKNNQTSLRSVL-SNSQD 177

Query: 176 LDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTP 235
           LDT+S+ SL+S LKKK G  + I++DTKVK+K+  L SKKVGIRVTCEG R  +P GK+P
Sbjct: 178 LDTESLASLRSGLKKKRGFPVTIQMDTKVKMKMEWLKSKKVGIRVTCEGIRGTVPAGKSP 237

Query: 236 SVATVDKSKCKVDLRIKIWKFTF 258
           SVA+V  S+CKVDLRIKIWKF+F
Sbjct: 238 SVASVIDSECKVDLRIKIWKFSF 260

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510804|gb|AFK43468.1| unknown [Medicago truncatula]

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/263 (52%), Positives = 180/263 (68%), Gaps = 17/263 (6%)

Query: 7   PSSKPAANGNGTVSAAA-------PPPVKPPLRPP----YRPQPHARRHHRPRRSYRCCC 55
           P SKP  NGNG ++  A       P PVK  L  P    YRPQ + RR     RS  CCC
Sbjct: 4   PPSKP--NGNGAINGVAATNGNGNPAPVKSQLYNPNRQVYRPQQYNRRRRS-NRSLCCCC 60

Query: 56  CFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLL 115
           CFWTIL +L  A L AI     YVLY PH+P+FS+ +LR+ ++NL + ADS + H+ TL 
Sbjct: 61  CFWTILTVLAAAFLVAIVGAVFYVLYHPHQPQFSITNLRIAKMNLKTPADSPS-HLTTLF 119

Query: 116 NFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSID 175
           N T+ +KNPN+H+ F+Y+PF ++A S S V +GNG++P F S K NQT L++V+ S S D
Sbjct: 120 NLTLIAKNPNNHLVFFYEPFTVTAFSDS-VQIGNGSLPAFDSGKNNQTSLRSVL-SNSQD 177

Query: 176 LDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTP 235
           LDT+S+ SL+S LKKK    + I++DTK K+K+  L SKKVGIRVTCEG R  +P GK+P
Sbjct: 178 LDTESLASLRSGLKKKRSFPVTIQMDTKAKMKMEWLKSKKVGIRVTCEGIRGTVPAGKSP 237

Query: 236 SVATVDKSKCKVDLRIKIWKFTF 258
           SVA+V  S+CKVDLRIKIWKF+F
Sbjct: 238 SVASVIDSECKVDLRIKIWKFSF 260

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447337|ref|XP_004141425.1| PREDICTED: uncharacterized protein LOC101215036 [Cucumis sativus] gi|449521641|ref|XP_004167838.1| PREDICTED: uncharacterized LOC101215036 [Cucumis sativus]

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/255 (58%), Positives = 191/255 (74%), Gaps = 8/255 (3%)

Query: 10  KPAA-NGNGTVSAAAPPPV--KPPLRP-PYRPQPH--ARRHHRPRRSYRCCCCFWTILVI 63
           KP++ NG  T +    PP   KP  R  PYRP P+   R HHR RR+  CC CFWTI+++
Sbjct: 7   KPSSVNGAATTNGTTIPPSSSKPNFRQHPYRPPPYRNHRNHHRSRRNLCCCFCFWTIIIV 66

Query: 64  LILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKN 123
           L L LLAAIA  ALYVLYRPHRP+F++ SLR+ +LNLT+S+DSS +H+++L N T++S N
Sbjct: 67  LGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSSDSSASHLSSLFNLTLSSFN 126

Query: 124 PNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKS 183
           PNSHITF YDPF++S  S+S V L NG++P F S  KNQT  +  ++SG+ DLD DSV S
Sbjct: 127 PNSHITFSYDPFLLSTFSNS-VLLANGSIPAFTSGTKNQTVFR-ALMSGAEDLDADSVTS 184

Query: 184 LKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEGFRAALPKGKTPSVATVDKS 243
           L+SDLKK+ G  L I++DTKVKVK+G+++SKKVGIRV+CEG +   P+GKTPSVA+V  +
Sbjct: 185 LRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGMKGIPPRGKTPSVASVSDA 244

Query: 244 KCKVDLRIKIWKFTF 258
            CKVDLRIKIW FT 
Sbjct: 245 DCKVDLRIKIWIFTL 259

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134571|ref|XP_002327437.1| predicted protein [Populus trichocarpa] gi|224148106|ref|XP_002336592.1| predicted protein [Populus trichocarpa] gi|118488541|gb|ABK96083.1| unknown [Populus trichocarpa] gi|222835991|gb|EEE74412.1| predicted protein [Populus trichocarpa] gi|222836267|gb|EEE74688.1| predicted protein [Populus trichocarpa]

 Score =  243 bits (619), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 130/276 (47%), Positives = 172/276 (62%), Gaps = 28/276 (10%)

Query: 1   MSDRVFPSSKPAANG-----------NGTVSAAAP--PPVKPPL----RPPYRPQPHARR 43
           M+DRV+PS+KPA NG           NGT +A  P  P  K  L    RP YRPQP+ +R
Sbjct: 1   MTDRVYPSTKPATNGTAATNPSFPATNGT-AATNPSFPATKAQLYGATRPTYRPQPNRKR 59

Query: 44  HHRPRRSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSS 103
                RS  C C  WT  VI IL +LA IA   +YVLYRPHRP F V  L +  LNLTS+
Sbjct: 60  S----RSCCCACVLWTTAVIFILIVLAVIAGAIIYVLYRPHRPSFDVSGLSISSLNLTSA 115

Query: 104 ADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSS-SDVFLGNGTVPGFFSDKKNQ 162
           +     H+ T +N  +T++NPN  + + Y+P  IS  +   D+ +G+G++P F    KN 
Sbjct: 116 S-----HLTTNINLNITARNPNKKLVYTYNPITISVTTERDDIVVGSGSLPSFVHGTKNT 170

Query: 163 TFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTC 222
           TFL+  + S  + LD  S   LK+DLK KNGV+LK++L+TKVKVK+G L + K  IRVTC
Sbjct: 171 TFLRAAITSSGVQLDDVSAGKLKADLKSKNGVALKLELETKVKVKMGGLKTPKARIRVTC 230

Query: 223 EGFRAALPKGKTPSVATVDKSKCKVDLRIKIWKFTF 258
           +G +A +P GK  + A+V  +KCKVDLRIKIWK+TF
Sbjct: 231 QGIKATVPSGKKATTASVSNAKCKVDLRIKIWKWTF 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
TAIR|locus:2143064	287	EMB3135 "AT5G11890" [Arabidops	0.798	0.717	0.389	4.7e-44
TAIR|locus:2007968	264	AT1G17620 "AT1G17620" [Arabido	0.972	0.950	0.289	1.8e-25
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.732	0.726	0.231	5.3e-11
TAIR|locus:2018531	252	AT1G65690 "AT1G65690" [Arabido	0.736	0.753	0.238	4.4e-09
TAIR|locus:2164092	213	AT5G53730 "AT5G53730" [Arabido	0.631	0.765	0.215	5.4e-08
TAIR|locus:2167489	248	NHL25 "AT5G36970" [Arabidopsis	0.620	0.645	0.257	9.4e-06
TAIR|locus:2098363	240	NHL2 "AT3G11650" [Arabidopsis	0.325	0.35	0.336	0.00013
TAIR|locus:2062974	252	AT2G46300 "AT2G46300" [Arabido	0.426	0.436	0.282	0.00093

TAIR|locus:2143064 EMB3135 "AT5G11890" [Arabidopsis thaliana (taxid:3702)]

 Score = 423 (154.0 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 81/208 (38%), Positives = 111/208 (53%)

Query:    53 CCCCFWXXXXXXXXXXXXXXXXXXXXXXXRPHRPEFSVPSLRLHRLNLTSSADSSTNHVA 112
             CCCCFW                        P  P FSVPS+R+ R+NLT+S+DSS +H++
Sbjct:    80 CCCCFWSILIILILALMTAIAATAMYVIYHPRPPSFSVPSIRISRVNLTTSSDSSVSHLS 139

Query:   113 TLLNFTVTSKNPNSHITFYYDPFVISALSS-SDVFLGNGTVPGFFSDKKNQTFLKNVVVS 171
             +  NFT+ S+NPN H++F YDPF ++  S+ S   LGNGTVP FFSD  N+T    V+ +
Sbjct:   140 SFFNFTLISENPNQHLSFSYDPFTVTVNSAKSGTMLGNGTVPAFFSDNGNKTSFHGVIAT 199

Query:   172 GSIXXXXXXXXXXXXXXXXXNG-VSLKIKLDTXXXXXXXXXXXXXXXIRVTCEGFRAALP 230
              +                     V  +I++ T               I+VTCEGF   +P
Sbjct:   200 STAARELDPDEAKHLRSDLTRARVGYEIEMRTKVKMIMGKLKSEGVEIKVTCEGFEGTIP 259

Query:   231 KGKTPSVATVDKSKCKVDLRIKIWKFTF 258
             KGKTP VAT  K+KCK DL +K+WK++F
Sbjct:   260 KGKTPIVATSKKTKCKSDLSVKVWKWSF 287

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2007968 AT1G17620 "AT1G17620" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 77/266 (28%), Positives = 106/266 (39%)

Query:     3 DRVFPSSKPAAN-GNG--TVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCC--CF 57
             DRV+P+SKP A  G G  T +                                CCC  C 
Sbjct:     4 DRVYPASKPPAIVGGGAPTTNPTFPANKAQLYNANRPAYRPPAGRRRTSHTRGCCCRCCC 63

Query:    58 WXXXXXXXXXXXXXXXXXXXXXXXRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNF 117
             W                       RP RP F+V  L++  LN TS+       + T ++ 
Sbjct:    64 WTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFTSAV-----RLTTAISL 118

Query:   118 TVTSKNPNSHITFYYDPFVISALSSS-----DVFLGNGTVPGFFSDKKNQTFLKNVVVSG 172
             +V ++NPN ++ F YD   I+   +S     DV +G GT+  F   KKN T L++ + S 
Sbjct:   119 SVIARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSP 178

Query:   173 SIXXXXXXXXXXXXXXXXXNGVSLKIKLDTXXXXXXXXXXXXXXXIRVTCEGFRAALPKG 232
                                  V++KI L++               IRVTCEG +   P G
Sbjct:   179 PDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCEGIKVVAPTG 238

Query:   233 KTPSVATVDKSKCKVDLRIKIWKFTF 258
             K  + AT   +KCKVD R KIWK TF
Sbjct:   239 KKATTATTSAAKCKVDPRFKIWKITF 264

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
 Identities = 47/203 (23%), Positives = 74/203 (36%)

Query:    53 CCCCFWXXXXXXXXXXXXXXXXXXXXXXX-RPHRPEFSVPSLRLHRLNLTSSADSSTNHV 111
             C CCF                         RP  P++S+    +  +NL     +ST+ +
Sbjct:    71 CRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL-----NSTSPI 125

Query:   112 ATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVS 171
             +   N TV S+N N  I  YY+      +  +DV + NG +P F+   KN T +K +V+S
Sbjct:   126 SPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVK-LVLS 184

Query:   172 GSIXXXXXXXXXXXXXXXXXNGVSLKIKLDTXXXXXXXXXXXXXXXIRVTCEGFRAALPK 231
             GS                    V  K+K+                 + V C+     + K
Sbjct:   185 GSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD---VTVDK 241

Query:   232 GKTPSVATVDKSKCKVDLRIKIW 254
                PS   +   KC  D  + +W
Sbjct:   242 LTAPS--RIVSRKCSHD--VDLW 260

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2018531 AT1G65690 "AT1G65690" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 4.4e-09, P = 4.4e-09
 Identities = 48/201 (23%), Positives = 76/201 (37%)

Query:    53 CCC-CF-WXXXXXXXXXXXXXXXXXXXXXXXRPHRPEFSVPSLRLHRLNLTSSADSSTNH 110
             CCC CF +                       +P  P++S+  L+L R  L    DSS   
Sbjct:    61 CCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQ--DSS--- 115

Query:   111 VATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVV 170
             + T  N T+T+KNPN  I  YY+      +   +  L NG++P F+   +N T +  V +
Sbjct:   116 LTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIY-VEM 174

Query:   171 SGSIXXXXXXXXXXXXXXXXXNGVSLKIKLDTXXXXXXXXXXXXXXXIRVTCEGFRAALP 230
             +G                     + L+I+++                  V C  F  +L 
Sbjct:   175 TGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLA 234

Query:   231 KGKTPSVATVDKSKCKVDLRI 251
                T +V  +  S CK  LR+
Sbjct:   235 ---TNNVIKIQSSSCKFRLRL 252

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006865 "amino acid transport" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2164092 AT5G53730 "AT5G53730" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 36/167 (21%), Positives = 64/167 (38%)

Query:    83 PHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSS 142
             P RPEFS+    ++ LNLT+S   ST+ + + +  T+ SKNPN  +  YYD  ++ A   
Sbjct:    51 PERPEFSLTEADIYSLNLTTS---STHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYR 107

Query:   143 SDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIXXXXXXXXXXXXXXXXXNGVSLKIKLDT 202
                     ++P F+   +    L    + G+                    + + +K+D 
Sbjct:   108 GQQITSEASLPPFYQSHEEINLL-TAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDG 166

Query:   203 XXXXXXXXXXXXXXXIRVTCEGFRAALPKGKTPSVATVDKSKCKVDL 249
                              V C    A      TP +A++  ++C   +
Sbjct:   167 KLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2167489 NHL25 "AT5G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 44/171 (25%), Positives = 68/171 (39%)

Query:    82 RPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYY-DPFVISAL 140
             RP  P++++  L+L R  L    D S   ++T  N T+T+KNPN  I  YY D   IS L
Sbjct:    88 RPKFPDYNIDRLQLTRFQLNQ--DLS---LSTAFNVTITAKNPNEKIGIYYEDGSKISVL 142

Query:   141 SSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIXXXXXXXXXXXXXXXXXNGVSLKIKL 200
                   + NG++P F+   +N T +  V ++G                     + L+I++
Sbjct:   143 YMQ-TRISNGSLPKFYQGHENTTIIL-VEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRV 200

Query:   201 DTXXXXXXXXXXXXXXXIRVTCEGFRAALPKGKTPSVATVDKSKCKVDLRI 251
                                V C G   ++      SV  V  S CK   R+
Sbjct:   201 TQPVRIKLGKLKLMKVRFLVRC-G--VSVDSLAANSVIRVRSSNCKYRFRL 248

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0009814 "defense response, incompatible interaction" evidence=IEP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IEP

TAIR|locus:2098363 NHL2 "AT3G11650" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 33/98 (33%), Positives = 47/98 (47%)

Query:    82 RPHRPEFSVPSLRLHRLNLTSSADSSTN-HVATLLNFTVTSKNPNSHITFYYDPFVISAL 140
             RP+  +F V    L+R     S D + N H +  LNFT+  +NPN  +  YYD F +S  
Sbjct:    78 RPNAVKFYVADANLNRF----SFDPNNNLHYSLDLNFTI--RNPNQRVGVYYDEFSVSGY 131

Query:   141 SSSDVFLGNGTVPGFFSDKKNQTFL------KNVVVSG 172
                  F G+  V  F+   KN T +      +N+VV G
Sbjct:   132 YGDQRF-GSANVSSFYQGHKNTTVILTKIEGQNLVVLG 168

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0051607 "defense response to virus" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2062974 AT2G46300 "AT2G46300" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 0.00093, P = 0.00093
 Identities = 33/117 (28%), Positives = 43/117 (36%)

Query:    53 CCCCFWXXXXXXXXXXXXXXXXXXXXXXXRPHRPEFSVPSLRLHRLNLTSSADSSTNHVA 112
             CCCC                          P  P FS+ S RL    L    D ++    
Sbjct:    59 CCCCICITLVLFIFLLLVGTAVFYLWFD--PKLPTFSLASFRLDGFKLADDPDGASLSAT 116

Query:   113 TLLNFTVTSKNPNSHITFYYDPFVI--SALSSSD-VFLGNGTVPGFFSDKKNQTFLK 166
              +    V  KNPNS + FYY    +  S  S +D   +G  T+ GF    KN T +K
Sbjct:   117 AVAR--VEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVK 171


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      258       171   0.00090  108 3  11 22  0.38    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.04u 0.10s 14.14t   Elapsed:  00:00:01
  Total cpu time:  14.04u 0.10s 14.14t   Elapsed:  00:00:01
  Start:  Sat May 11 02:56:47 2013   End:  Sat May 11 02:56:48 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	258
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	4e-05

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 9/107 (8%)

Query: 118 TVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLD 177
           T+  +NPNS     YD        +        +           T      +   + + 
Sbjct: 1   TLRVRNPNS-FPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTT-----TLEVPVTVS 54

Query: 178 TDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVGKLSSKKVGIRVTCEG 224
            D +  L  DL     V L++    + ++KVG        + ++ EG
Sbjct: 55  LDDLARLLKDLLA---VGLELPYTLRGRLKVGGPVKGSRTVPLSKEG 98

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.37
smart00769	100	WHy Water Stress and Hypersensitive response.	98.42
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.62
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.54
COG5608	161	LEA14-like dessication related protein [Defense me	96.85
PLN03160	219	uncharacterized protein; Provisional	96.43
TIGR03602	56	streptolysinS bacteriocin protoxin, streptolysin S	86.99
KOG3950	292	consensus Gamma/delta sarcoglycan [Cytoskeleton]	84.78

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=8.1e-36  Score=258.27  Aligned_cols=184  Identities=18%  Similarity=0.269  Sum_probs=150.3

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHheeeeEeeCCCceEEEeeEEEeeeeccCCCCCCCceEeEEEEEEEEEeCCCceEE
Q 038352           50 SYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHIT  129 (258)
Q Consensus        50 ~~~~~c~~~~~~~~~~l~~l~~i~~~i~~lv~rP~~P~fsV~s~~v~~fnls~~s~~~~~~l~~~~~ltl~a~NPN~ki~  129 (258)
                      ++||+||+|+++++++   |++++++++|++||||+|+|+|++++|++|++++.+ .....+|++++++++++|||. ++
T Consensus        34 ~~~~~c~~~~~a~~l~---l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~-~~~~~~n~tl~~~v~v~NPN~-~~  108 (219)
T PLN03160         34 RNCIKCCGCITATLLI---LATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNT-TLRPGTNITLIADVSVKNPNV-AS  108 (219)
T ss_pred             ccceEEHHHHHHHHHH---HHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCC-CCceeEEEEEEEEEEEECCCc-ee
Confidence            4455555555555443   355667778999999999999999999999997632 123478899999999999998 89


Q ss_pred             EEEcCcEEEEEeeCCeeeecccCCceeccCCCcEEEEEEEEEcccccChhHHHHHHHhhhcCCeEEEEEEEEEEEEEEEe
Q 038352          130 FYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKVKVKVG  209 (258)
Q Consensus       130 i~Y~~~~v~v~~y~~~~Lg~~~vp~F~q~~~~tt~v~~~l~~~~~~l~~~~~~~L~~d~~s~g~v~l~v~v~~~vr~kvg  209 (258)
                      |+|++++++++ |+|..+|.+.+|+|+|++++++.+.+++...+..+.++  ..|.+|+.+ |.++|++.+++++++++|
T Consensus       109 ~~Y~~~~~~v~-Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~--~~L~~D~~~-G~v~l~~~~~v~gkVkv~  184 (219)
T PLN03160        109 FKYSNTTTTIY-YGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSV--PGLLTDISS-GLLNMNSYTRIGGKVKIL  184 (219)
T ss_pred             EEEcCeEEEEE-ECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccc--hhHHHHhhC-CeEEEEEEEEEEEEEEEE
Confidence            99999999999 99999999999999999999999999987655444332  468899665 899999999999999999


Q ss_pred             EEEeceeeEEEEcCceEecccCCCCCccceeccCcceeee
Q 038352          210 KLSSKKVGIRVTCEGFRAALPKGKTPSVATVDKSKCKVDL  249 (258)
Q Consensus       210 ~~~s~~~~v~V~C~~v~~~~~~~~~~~~~~~~~~~C~v~~  249 (258)
                      +++++++.++++|+ +.+.+.      ...+++++|+.++
T Consensus       185 ~i~k~~v~~~v~C~-v~V~~~------~~~i~~~~C~~~~  217 (219)
T PLN03160        185 KIIKKHVVVKMNCT-MTVNIT------SQAIQGQKCKRHV  217 (219)
T ss_pred             EEEEEEEEEEEEeE-EEEECC------CCEEeccEecccc
Confidence            99999999999999 444442      2478899998664

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.37  E-value=2.5e-12  Score=97.13  Aligned_cols=98  Identities=27%  Similarity=0.370  Sum_probs=75.0

Q ss_pred             EEEEeCCCceEEEEEcCcEEEEEeeCCeeee-cccCCceeccCCCcEEEEEEEEEcccccChhHHHHHHHhhhcCCeEEE
Q 038352          118 TVTSKNPNSHITFYYDPFVISALSSSDVFLG-NGTVPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSL  196 (258)
Q Consensus       118 tl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg-~~~vp~F~q~~~~tt~v~~~l~~~~~~l~~~~~~~L~~d~~s~g~v~l  196 (258)
                      +|+++|||. ++++|++++++++ |+|..+| ....++|.|++++++.+.+.+..+...+    .+.|.++. + |...+
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~-~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~-~~~~~   72 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVY-YNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-A-GRVPF   72 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEE-ESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-H-TTSCE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEE-ECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-c-cccce
Confidence            689999998 9999999999999 9999999 7788999999999999999888876544    44555664 3 57788


Q ss_pred             EEEEEEEEEEEE-eEEEeceeeEEEEcC
Q 038352          197 KIKLDTKVKVKV-GKLSSKKVGIRVTCE  223 (258)
Q Consensus       197 ~v~v~~~vr~kv-g~~~s~~~~v~V~C~  223 (258)
                      ++.+++++++++ +.....++.+.++|+
T Consensus        73 ~v~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   73 DVTYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEEEEcccceeeeEEEeEEeE
Confidence            888888888884 444334455666654

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.42  E-value=4.1e-06  Score=63.77  Aligned_cols=85  Identities=16%  Similarity=0.212  Sum_probs=66.7

Q ss_pred             eEeEEEEEEEEEeCCCceEEEEEcCcEEEEEeeCCeeeecccCC-ceeccCCCcEEEEEEEEEcccccChhHHHHHHHhh
Q 038352          110 HVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVP-GFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLKSDL  188 (258)
Q Consensus       110 ~l~~~~~ltl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~vp-~F~q~~~~tt~v~~~l~~~~~~l~~~~~~~L~~d~  188 (258)
                      .++.++.+++.+.|||. +.+.|++++.+++ |+|..+|++..+ ++..++++++.+++++..+ ...    ...+..++
T Consensus        12 ~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~-~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~-~~~----~~~~~~~l   84 (100)
T smart00769       12 GLEIEIVLKVKVQNPNP-FPIPVNGLSYDLY-LNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN-LFL----AEALIWHI   84 (100)
T ss_pred             ceEEEEEEEEEEECCCC-CccccccEEEEEE-ECCEEEEEEEcCCCcEECCCCcEEEEEEEEee-hhH----hHHHHHhh
Confidence            57799999999999996 8999999999999 999999999985 7999999999999999873 222    23455555


Q ss_pred             hcCCeEEEEEEEE
Q 038352          189 KKKNGVSLKIKLD  201 (258)
Q Consensus       189 ~s~g~v~l~v~v~  201 (258)
                      .++..++++++.+
T Consensus        85 ~~~~~~~y~l~g~   97 (100)
T smart00769       85 ANGEEIPYRLDGK   97 (100)
T ss_pred             ccCCCccEEEEEE
Confidence            5433355544443

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.62  E-value=0.00042  Score=64.17  Aligned_cols=85  Identities=19%  Similarity=0.322  Sum_probs=49.6

Q ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHheeeeEeeCCCceEEEeeEEEeeee-ccCCCCCCCceEeEEEEEEEEEeCCCce
Q 038352           49 RSYRCCCCFWTILVILILALLAAIAATALYVLYRPHRPEFSVPSLRLHRLN-LTSSADSSTNHVATLLNFTVTSKNPNSH  127 (258)
Q Consensus        49 r~~~~~c~~~~~~~~~~l~~l~~i~~~i~~lv~rP~~P~fsV~s~~v~~fn-ls~~s~~~~~~l~~~~~ltl~a~NPN~k  127 (258)
                      |++|.+..+|+++.+++|+++.++++++| ..-+|      ++++.|..+. +-.+      .--.-|+++|.|.|||. 
T Consensus       296 r~~~~r~~~c~~~~i~~lL~ig~~~gFv~-AttKp------L~~v~v~~I~NVlaS------~qELmfdl~V~A~NPn~-  361 (387)
T PF12751_consen  296 RSWFSRFASCIYLSILLLLVIGFAIGFVF-ATTKP------LTDVQVVSIQNVLAS------EQELMFDLTVEAFNPNW-  361 (387)
T ss_pred             ccHHhhhhHHHHHHHHHHHHHHHHHHhhh-hcCcc------cccceEEEeeeeeec------cceEEEeeEEEEECCCe-
Confidence            44554444444444444444444444433 34455      4555554442 2111      23477999999999995 


Q ss_pred             EEEEEcCcEEEEEeeCCeeee
Q 038352          128 ITFYYDPFVISALSSSDVFLG  148 (258)
Q Consensus       128 i~i~Y~~~~v~v~~y~~~~Lg  148 (258)
                      +.|..++.+++|+ -+...+|
T Consensus       362 ~~V~I~d~dldIF-AKS~yvg  381 (387)
T PF12751_consen  362 FTVTIDDMDLDIF-AKSRYVG  381 (387)
T ss_pred             EEEEeccceeeeE-ecCCccC
Confidence            8999999999998 4443333

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.54  E-value=0.0026  Score=55.65  Aligned_cols=85  Identities=14%  Similarity=0.163  Sum_probs=60.4

Q ss_pred             eeCCCceEEEeeEEEeeeeccCCCCCCCceEeEEEEEEEEEeCCCceEEEEEcCcEEEEEeeCCeeeecccCCc-eeccC
Q 038352           81 YRPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPG-FFSDK  159 (258)
Q Consensus        81 ~rP~~P~fsV~s~~v~~fnls~~s~~~~~~l~~~~~ltl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~vp~-F~q~~  159 (258)
                      +=||.-.++-.++......++...    .++..++.-+|.++|+|- ..+.-..+++++. |....+|.+.... ...++
T Consensus        96 LfPRsV~v~~~gv~s~~V~f~~~~----~~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv~-~~~~VVG~~~~~~~~~I~P  169 (238)
T PF07092_consen   96 LFPRSVTVSPVGVKSVTVSFNPDK----STVQLNITNTLNISNPNF-YPVTVTNLSIQVL-YMKTVVGKGKNSNITVIGP  169 (238)
T ss_pred             EeCcEEEEecCcEEEEEEEEeCCC----CEEEEEEEEEEEccCCCE-EEEEEEeEEEEEE-EEEeEEeeeEecceEEecc
Confidence            347665555555444444444332    278889999999999995 8899999999999 8889999997754 36666


Q ss_pred             CCcEEEEEEEEE
Q 038352          160 KNQTFLKNVVVS  171 (258)
Q Consensus       160 ~~tt~v~~~l~~  171 (258)
                      ++.+.+..++..
T Consensus       170 rs~~q~~~tV~t  181 (238)
T PF07092_consen  170 RSSKQVNYTVKT  181 (238)
T ss_pred             cCCceEEEEeeE
Confidence            766666665543

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=96.85  E-value=0.095  Score=42.78  Aligned_cols=82  Identities=13%  Similarity=0.185  Sum_probs=63.1

Q ss_pred             CCceEEEeeEEEeeeeccCCCCCCCceEeEEEEEEEEEeCCCceEEEEEcCcEEEEEeeCCeeeecccC-CceeccCCCc
Q 038352           84 HRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTV-PGFFSDKKNQ  162 (258)
Q Consensus        84 ~~P~fsV~s~~v~~fnls~~s~~~~~~l~~~~~ltl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~v-p~F~q~~~~t  162 (258)
                      +.|...--.+..-..  +.        ...++..++.+.|||. +.+-..+.+..++ -+|..+|.|.. .++..++++.
T Consensus        31 ~~p~ve~~ka~wGkv--t~--------s~~EiV~t~KiyNPN~-fPipVtgl~y~vy-mN~Iki~eG~~~k~~~v~p~S~   98 (161)
T COG5608          31 KKPGVESMKAKWGKV--TN--------SETEIVGTLKIYNPNP-FPIPVTGLQYAVY-MNDIKIGEGEILKGTTVPPNSR   98 (161)
T ss_pred             CCCCceEEEEEEEEE--ec--------cceEEEEEEEecCCCC-cceeeeceEEEEE-EcceEeeccccccceEECCCCe
Confidence            456655545544432  22        2368999999999997 8888889999998 89999999976 5699999999


Q ss_pred             EEEEEEEEEcccccC
Q 038352          163 TFLKNVVVSGSIDLD  177 (258)
Q Consensus       163 t~v~~~l~~~~~~l~  177 (258)
                      ..+.+.+..+.-.+.
T Consensus        99 ~tvdv~l~~d~~~~k  113 (161)
T COG5608          99 ETVDVPLRLDNSKIK  113 (161)
T ss_pred             EEEEEEEEEehHHHH
Confidence            999999987764443

>PLN03160 uncharacterized protein; Provisional

Probab=96.43  E-value=0.02  Score=49.80  Aligned_cols=104  Identities=20%  Similarity=0.224  Sum_probs=59.2

Q ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHheeeeEeeC--CCceEEEeeEEEee-------eeccCCCCCCCceEeEEEEEE
Q 038352           48 RRSYRCCCCFWTILVILILALLAAIAATALYVLYRP--HRPEFSVPSLRLHR-------LNLTSSADSSTNHVATLLNFT  118 (258)
Q Consensus        48 ~r~~~~~c~~~~~~~~~~l~~l~~i~~~i~~lv~rP--~~P~fsV~s~~v~~-------fnls~~s~~~~~~l~~~~~lt  118 (258)
                      ++.+||+|++-+++++.+++++   ++++++=-=.|  +.-.++|+++.+..       +|++-..+-  ..-|.|. +.
T Consensus        35 ~~~~c~~~~~a~~l~l~~v~~~---l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v--~v~NPN~-~~  108 (219)
T PLN03160         35 NCIKCCGCITATLLILATTILV---LVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADV--SVKNPNV-AS  108 (219)
T ss_pred             cceEEHHHHHHHHHHHHHHHHh---eeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEE--EEECCCc-ee
Confidence            5677777777777777776543   34455555666  35667777776643       222110000  0113444 44


Q ss_pred             EEEeCCCceEEEEEcCcEEEEEeeCCeeeecccCCceeccCCCcEE
Q 038352          119 VTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVPGFFSDKKNQTF  164 (258)
Q Consensus       119 l~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~vp~F~q~~~~tt~  164 (258)
                      +.-.  |..+.++|++..+.-     ..+..+.++++.+..-+.+.
T Consensus       109 ~~Y~--~~~~~v~Y~g~~vG~-----a~~p~g~~~ar~T~~l~~tv  147 (219)
T PLN03160        109 FKYS--NTTTTIYYGGTVVGE-----ARTPPGKAKARRTMRMNVTV  147 (219)
T ss_pred             EEEc--CeEEEEEECCEEEEE-----EEcCCcccCCCCeEEEEEEE
Confidence            4444  345889998755443     34666777777777777664

>TIGR03602 streptolysinS bacteriocin protoxin, streptolysin S family

Probab=86.99  E-value=0.043  Score=35.96  Aligned_cols=6  Identities=67%  Similarity=2.400  Sum_probs=2.3

Q ss_pred             ccchhH
Q 038352           51 YRCCCC   56 (258)
Q Consensus        51 ~~~~c~   56 (258)
                      ||||||
T Consensus        26 cccccc   31 (56)
T TIGR03602        26 CCCCCC   31 (56)
T ss_pred             eEEEec
Confidence            333333

Members of this family are bacteriocin precursors. These small, ribosomally produced polypeptide precursors are extensively processed post-translationally. This family belongs to a class of heterocycle-containing bacteriocins, including streptolysin S from Streptococcus pyogenes, and related bacteriocins from Streptococcus iniae and Clostridium botulinum. Streptolysin S is hemolytic. Bacteriocin genes in general are small and highly diverse, with odd sequence composition, and are easily missed by many gene-finding programs.

>KOG3950 consensus Gamma/delta sarcoglycan [Cytoskeleton]

Probab=84.78  E-value=2.1  Score=37.65  Aligned_cols=24  Identities=33%  Similarity=0.383  Sum_probs=19.6

Q ss_pred             CCceEeEEEEEEEEEeCCCceEEE
Q 038352          107 STNHVATLLNFTVTSKNPNSHITF  130 (258)
Q Consensus       107 ~~~~l~~~~~ltl~a~NPN~ki~i  130 (258)
                      ++..+...=++++.++|||.++.=
T Consensus       102 ~~l~~~S~rnvtvnarn~~g~v~~  125 (292)
T KOG3950|consen  102 SPLYLQSARNVTVNARNPNGKVTG  125 (292)
T ss_pred             CceEEEeccCeeEEccCCCCceee
Confidence            346778888999999999998763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.09
1xo8_A	151	AT1G01470; structural genomics, protein structure	97.97
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	97.89

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.09  E-value=1.8e-05  Score=65.23  Aligned_cols=102  Identities=18%  Similarity=0.132  Sum_probs=78.1

Q ss_pred             CCceEEEeeEEEeeeeccCCCCCCCceEeEEEEEEEEEeCCCceEEEEEcCcEEEEEeeCCeeeecccCC-ceeccCCCc
Q 038352           84 HRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVP-GFFSDKKNQ  162 (258)
Q Consensus        84 ~~P~fsV~s~~v~~fnls~~s~~~~~~l~~~~~ltl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~vp-~F~q~~~~t  162 (258)
                      +.|+++++++++.+++..          ..+|.+.++++|||. ..+.+.+++.++. -+|..|++|..+ ++..+++++
T Consensus        43 ~~PeV~v~~v~~~~~~l~----------~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~-vnG~~lasG~s~~~~tIpa~g~  110 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD----------GVDYHAKVSVKNPYS-QSIPICQISYILK-SATRTIASGTIPDPGSLVGSGT  110 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS----------SEEEEEEEEEEECSS-SCCBCCSEEEEEE-ESSSCEEEEEESCCCBCCSSEE
T ss_pred             CCCEEEEEEeEEeccccc----------eEEEEEEEEEECCCC-CCccccceEEEEE-ECCEEEEEEecCCCceECCCCc
Confidence            679999999999876443          277999999999997 8999999999999 899999999986 489999999


Q ss_pred             EEEEEEEEEcccccChhHHHHHHHhhhcCCeEEEEEEEEE
Q 038352          163 TFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDT  202 (258)
Q Consensus       163 t~v~~~l~~~~~~l~~~~~~~L~~d~~s~g~v~l~v~v~~  202 (258)
                      +.+.+.++....     ...++..++...+.++.++++..
T Consensus       111 ~~v~Vpv~v~~~-----~l~~~~~~l~~~~~i~Y~L~g~L  145 (174)
T 1yyc_A          111 TVLDVPVKVAYS-----IAVSLMKDMCTDWDIDYQLDIGL  145 (174)
T ss_dssp             EEEEEEEEESHH-----HHHHTCCCCCSSEEECEEEEEEE
T ss_pred             EEEEEEEEEEHH-----HHHHHHHhcCCCCccceEEEEEE
Confidence            999999987642     11223344443344555555543

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=97.97  E-value=9.4e-06  Score=65.40  Aligned_cols=104  Identities=21%  Similarity=0.178  Sum_probs=77.9

Q ss_pred             CCceEEEeeEEEeeeeccCCCCCCCceEeEEEEEEEEEeCCCceEEEEEcCcEEEEEeeCCeeeecccCC-ceeccCCCc
Q 038352           84 HRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVP-GFFSDKKNQ  162 (258)
Q Consensus        84 ~~P~fsV~s~~v~~fnls~~s~~~~~~l~~~~~ltl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~vp-~F~q~~~~t  162 (258)
                      +.|++++.++++.+++.          ...+|.+.++++|||. ..+.+.+++.++. -+|..+++|..+ ++..+++++
T Consensus        20 ~~P~v~v~~v~~~~~~~----------~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~-vng~~lasG~~~~~~~ipa~g~   87 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR----------DSVEYLAKVSVTNPYS-HSIPICEISFTFH-SAGREIGKGKIPDPGSLKAKDM   87 (151)
T ss_dssp             CSCCCBCSEEEECCCTT----------TEECEEEEEEEECSSS-SCCCCEEEEEEEE-SSSSCEEEEEEEECCCCSSSSE
T ss_pred             CCCEEEEEEeEEeccCc----------ceeEEEEEEEEECCCC-CCcccccEEEEEE-ECCEEEEEEecCCCcEECCCCc
Confidence            57999999998875533          2367999999999997 7899999999998 899999999986 589999999


Q ss_pred             EEEEEEEEEcccccChhHHHHHHHhhhcCCeEEEEEEEEEEE
Q 038352          163 TFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTKV  204 (258)
Q Consensus       163 t~v~~~l~~~~~~l~~~~~~~L~~d~~s~g~v~l~v~v~~~v  204 (258)
                      +.+.+.++.+...+     .++..++...+.++.+++++..+
T Consensus        88 ~~v~vpv~v~~~~l-----~~~~~~l~~~~~i~Y~l~g~l~i  124 (151)
T 1xo8_A           88 TALDIPVVVPYSIL-----FNLARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             EEEEECCCEEHHHH-----HHHHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEEEEEEEEEHHHH-----HHHHHhcccCCcccEEEEEEEEE
Confidence            99998887764222     22333333335666666655543

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=97.89  E-value=0.00019  Score=56.76  Aligned_cols=72  Identities=13%  Similarity=0.019  Sum_probs=61.8

Q ss_pred             eEEEEEEEEEeCCCceEEEEEcCcEEEEEeeCCeeeeccc-CCceeccCCCcEEEEEEEEEcccccChhHHHHHH
Q 038352          112 ATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGT-VPGFFSDKKNQTFLKNVVVSGSIDLDTDSVKSLK  185 (258)
Q Consensus       112 ~~~~~ltl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~-vp~F~q~~~~tt~v~~~l~~~~~~l~~~~~~~L~  185 (258)
                      .+.|.+.+++.|||. +.+.+++++.++. .+|..||+|. ...+..++.+.+.+.+.+..+...+.+...+.|+
T Consensus        17 ~t~~~~~l~V~NPN~-~~l~i~gl~y~v~-lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~   89 (136)
T 3but_A           17 QTEIVALAKVRNEDV-VPIVVSGYHYTIE-MNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIA   89 (136)
T ss_dssp             EEEEEEEEEEECCSS-SCEEEEEEEEEEE-ETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHH
T ss_pred             EEEEEEEEEEeCCCC-cceeeeceEEEEE-ECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhh
Confidence            478999999999996 8999999999999 8999999997 5789999999999999999887667665555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.07

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.07  E-value=2.3e-06  Score=67.09  Aligned_cols=105  Identities=21%  Similarity=0.176  Sum_probs=77.6

Q ss_pred             eCCCceEEEeeEEEeeeeccCCCCCCCceEeEEEEEEEEEeCCCceEEEEEcCcEEEEEeeCCeeeecccCC-ceeccCC
Q 038352           82 RPHRPEFSVPSLRLHRLNLTSSADSSTNHVATLLNFTVTSKNPNSHITFYYDPFVISALSSSDVFLGNGTVP-GFFSDKK  160 (258)
Q Consensus        82 rP~~P~fsV~s~~v~~fnls~~s~~~~~~l~~~~~ltl~a~NPN~ki~i~Y~~~~v~v~~y~~~~Lg~~~vp-~F~q~~~  160 (258)
                      +=+.|++++.++++.++.+.          ..++.+++++.|||. .++..++.+.++. .+|..+++|..+ ++..+++
T Consensus        18 ~~~kPev~l~~v~i~~v~~~----------~~~l~~~l~V~NPN~-~~l~i~~l~y~l~-~~g~~ia~G~~~~~~~ipa~   85 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD----------SVEYLAKVSVTNPYS-HSIPICEISFTFH-SAGREIGKGKIPDPGSLKAK   85 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT----------EECEEEEEEEECSSS-SCCCCEEEEEEEE-SSSSCEEEEEEEECCCCSSS
T ss_pred             CCCCCeEEEEEEEeeecccc----------eEEEEEEEEEECCCC-CceeeeeEEEEEE-ECCEEEEeEecCCCcEEcCC
Confidence            34679999999998765432          367999999999997 7899999999999 899999999886 5899999


Q ss_pred             CcEEEEEEEEEcccccChhHHHHHHHhhhcCCeEEEEEEEEEE
Q 038352          161 NQTFLKNVVVSGSIDLDTDSVKSLKSDLKKKNGVSLKIKLDTK  203 (258)
Q Consensus       161 ~tt~v~~~l~~~~~~l~~~~~~~L~~d~~s~g~v~l~v~v~~~  203 (258)
                      +++.+++.++..-..+    . ++..++.+.+.++.++++...
T Consensus        86 ~~~~v~vpv~v~~~~l----~-~~~~~i~~~~~i~Y~l~g~l~  123 (151)
T d1xo8a_          86 DMTALDIPVVVPYSIL----F-NLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             SEEEEEECCCEEHHHH----H-HHHHHHHHHSEEEEEEEEEEE
T ss_pred             CcEEEEEEEEEEHHHH----H-HHHHhhccCCCccEEEEEEEE
Confidence            9999998887653222    2 333344443455555444444