Citrus Sinensis ID: 038418

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
Protein Sequence
GICKPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIKPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLSPARNES
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHHHHHcccccHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEccEEEEEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHHHHHHHHHHHccEcccccccEEEcccEEEHHHHHHcccEcccccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccEEcccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHccccccccccccccccccccccccccccccccEEEEEEEccEEEccEEEEEEEEEccccccc
Coil and Loop (DISEMBL)
gickpsavtpaKSRLARTFAKVLHIRsvtgvapvdgvdkvkdntvkpkdkfkddhqaagvaikppkvswsqlfgkedTELEYRISLEAFLAKLFASISTVKSSYVQLQhaqspydadgiqsADQLVVSELKLLSELKQCYlkkqfdfspektMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMNqsgqlvmpdnvhlsglspshfnTVLRHTVKSIRSFVRLMIDELKSagwdidaaansiqpnvvyyradhkcfafeSFVCREmfdafhypnyspakqhQQQQQQQQQRQQLFFQRFnelkpvkakeflsrkpkssfakfcrakycqvihpkmesaffgdlsqrnvinsgefpdsaffsSFADMAKRVWLLHCLafsfdpeasifqvnkgsrfSEVYMESVAEEAflsssenpqessslspslssssdsaeprvaftivpgfrigKTVLQCQVylsparnes
Flexible Loop (DISEMBL)
gickpsavtpaksrlARTFAKvlhirsvtgvapvdgvdkvkdntvkpkdkfkddhqaagvaikppkvswsqLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKqfdfspektmVSAEIQELKSLLKTYEIMGKKlesqlklkdSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQHQQQQQQQQQRQQLFFQRFNELkpvkakeflsrkpkssfakFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVAEEAFLSSSENPQESSSLspslssssdsaEPRVAFTIVPGFRIGKTVLQCQVYLSPARNES
Low Complexity Region (SEG)
GICKPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIKPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADqlvvselkllselkqCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKqhqqqqqqqqqrqqlffqrfNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPdsaffssfadMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVAEEAFlsssenpqessslspslssssdsaepRVAFTIVPGFRIGKTVLQCQVYLSPARNES
Disordered region (IsUnstruct)
**************LARTFAKVLHIRSVTGVAPVDGVDK*******************GVAIKPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFL*******************************LSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPN*******************************************SFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYM***********************************VAFTIVPGFRIGKTVLQCQVYL*******
Disordered Region (DISOPRED)
******************FAKVLHIRSVTGVA*****************************************************LEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLS***********************************I************D*****************************************SPSHFNTVLRHTVKSIRSFVRLMIDELK****D*DAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQ*********QRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVA*******************************VAFTIVPGFRIGKTVLQCQVY*SPA****
Disordered Region (DISEMBL)
*************RLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIKPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYS****************QLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVA*****************************PRVAFTIVPGFRIGKTVLQCQVYLSPARNES
Disordered Region (DISPRO)
*********PAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAI*********LFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVA***************************AEPRVAFTIVPGFRIGKTVLQCQVYLSP*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
GICKPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIKPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLSPARNES
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	487
224114764	462	predicted protein [Populus trichocarpa]	0.919	0.969	0.643	1e-173
225461722	454	PREDICTED: uncharacterized protein LOC10	0.915	0.982	0.637	1e-171
224117448	464	predicted protein [Populus trichocarpa]	0.928	0.974	0.622	1e-171
356549645	474	PREDICTED: uncharacterized protein LOC10	0.919	0.945	0.615	1e-171
356544104	470	PREDICTED: uncharacterized protein LOC10	0.921	0.955	0.605	1e-169
255567094	466	conserved hypothetical protein [Ricinus	0.936	0.978	0.630	1e-168
255637747	464	unknown [Glycine max]	0.921	0.967	0.601	1e-167
147796417	505	hypothetical protein VITISV_013476 [Viti	0.907	0.875	0.632	1e-167
356517048	462	PREDICTED: uncharacterized protein LOC10	0.907	0.956	0.618	1e-167
356543213	464	PREDICTED: uncharacterized protein LOC10	0.905	0.950	0.610	1e-165

>gi|224114764|ref|XP_002316851.1| predicted protein [Populus trichocarpa] gi|222859916|gb|EEE97463.1| predicted protein [Populus trichocarpa]

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 309/480 (64%), Positives = 377/480 (78%), Gaps = 32/480 (6%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDD-HQAAGVAI 62
           KPSAVTP KS+ ART AKVLH+R+ +G+APVDGV KV       ++K KD+ H+    A 
Sbjct: 5   KPSAVTPRKSKFARTVAKVLHLRAASGIAPVDGVQKVV-----AQEKVKDEKHRHKSAAS 59

Query: 63  KPPKVSWSQLFGKEDT-ELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQS 121
           +P      Q F   D  E E  ++LE  +AKLFAS+S+VK++Y QLQ+AQSPYDADGIQ 
Sbjct: 60  RP------QSFDINDNDEHEKSLALEVLVAKLFASLSSVKAAYAQLQYAQSPYDADGIQG 113

Query: 122 ADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKL 181
           AD LVVSELK LS+LKQCY+KKQFD SP+ ++V A+IQE KSL K YEIMGKKLESQL+L
Sbjct: 114 ADHLVVSELKNLSDLKQCYIKKQFDPSPDTSLVLADIQEQKSLSKIYEIMGKKLESQLRL 173

Query: 182 KDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIR 241
           K+SEI +L+EK+EESN+QN+ LEKR+NQSG L MP N+  SGLSPSHF TVLRHT KSIR
Sbjct: 174 KESEITYLREKMEESNRQNRLLEKRLNQSGHLSMPGNLRQSGLSPSHFITVLRHTDKSIR 233

Query: 242 SFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPA 301
           SFV+LMIDE+KSAGWD+DAAA SI  +V Y+RAD KCFAFESFV REMFD FH PN+S  
Sbjct: 234 SFVKLMIDEMKSAGWDLDAAAKSIVSDVAYWRADDKCFAFESFVSREMFDGFHLPNFSLQ 293

Query: 302 KQHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESA 361
           ++   +++ Q   QQLFF+RF ELK  KA E+++ KPKS+FAKFCRAKY Q+IHP+ME++
Sbjct: 294 EESLPEKKNQ---QQLFFRRFTELKSAKATEYIAHKPKSTFAKFCRAKYLQLIHPQMETS 350

Query: 362 FFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEV 421
           F G+LSQR+++NSGEFPD++FF++F +MA+RVWLLHCLAFSFDPEASIFQV +G RFSEV
Sbjct: 351 FLGNLSQRSLVNSGEFPDNSFFATFVEMARRVWLLHCLAFSFDPEASIFQVRRGCRFSEV 410

Query: 422 YMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLS 481
           YME VAE+A L  SEN  E              A+P VAFT+VPGFRIGKTV+QCQVYLS
Sbjct: 411 YMECVAEDALL--SENAPE--------------ADPPVAFTVVPGFRIGKTVIQCQVYLS 454

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461722|ref|XP_002285510.1| PREDICTED: uncharacterized protein LOC100255640 [Vitis vinifera]

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 306/480 (63%), Positives = 375/480 (78%), Gaps = 34/480 (7%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           K SAVTP+KSRLARTFAKVLH+R VTGVAPVDG+ K+K       +  KDD         
Sbjct: 5   KRSAVTPSKSRLARTFAKVLHLRMVTGVAPVDGIQKIK-----APESSKDDQDTG----- 54

Query: 64  PPKVSWS--QLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQS 121
               SWS  Q +   D +L     LEA LA+LFASIS+VKS+Y QLQ+AQSPYD++GIQS
Sbjct: 55  ----SWSRSQSYDDNDEKLRNTAELEAHLAQLFASISSVKSAYAQLQYAQSPYDSNGIQS 110

Query: 122 ADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKL 181
           ADQ+VVSELK LSELK+CYLKKQFD SPE+T+  AEIQE KSLLKTYEIM KKLE Q+KL
Sbjct: 111 ADQIVVSELKNLSELKRCYLKKQFDPSPERTLCLAEIQEQKSLLKTYEIMRKKLECQMKL 170

Query: 182 KDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIR 241
           KDSEI FL+EKLE+ +KQNK+LEKR+N S  L + DN+HLSG+SPSHF TVL+HTVKSIR
Sbjct: 171 KDSEITFLREKLEDCHKQNKSLEKRLNPSAHLSVLDNLHLSGISPSHFITVLQHTVKSIR 230

Query: 242 SFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPA 301
           SFVRLMI+E++S+GWDI+AAA +IQP+VV+ +A H+C AFESFVCREMFD+FH+PN+S  
Sbjct: 231 SFVRLMINEMESSGWDINAAAAAIQPSVVFLKATHRCLAFESFVCREMFDSFHFPNFSLP 290

Query: 302 KQHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESA 361
               +   +Q Q Q+ FF+RF +LK  + KE+L++KPKS+F KFCRAKY +++HPKMES+
Sbjct: 291 ---NESLPEQNQWQRFFFERFIKLKSTRVKEYLAQKPKSTFGKFCRAKYLKLVHPKMESS 347

Query: 362 FFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEV 421
           FFG+LSQR+++NSG+FPD+ FF+SF++MAKRVWLLHCLAFSF+PEA IFQVNKG  FSEV
Sbjct: 348 FFGNLSQRSIVNSGKFPDTPFFTSFSEMAKRVWLLHCLAFSFNPEAKIFQVNKGCPFSEV 407

Query: 422 YMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLS 481
           YMES+ +E        P  +    P   S       RVAFT+VPGFRIGKTV+QCQVYLS
Sbjct: 408 YMESIIDE--------PSPAPDCPPETHS-------RVAFTVVPGFRIGKTVIQCQVYLS 452

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117448|ref|XP_002331715.1| predicted protein [Populus trichocarpa] gi|222874321|gb|EEF11452.1| predicted protein [Populus trichocarpa]

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 298/479 (62%), Positives = 369/479 (77%), Gaps = 27/479 (5%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           KPSAVT  KS+ AR  AKV+ +R+ TG+AP DGV KV    V  ++   D H     A +
Sbjct: 5   KPSAVTSKKSKFARNVAKVIQLRAATGIAPADGVQKV----VSQEEVKHDKHHRKSAASR 60

Query: 64  PPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSAD 123
           P     + +      E +  ++LEA +AK+FAS+S VK++Y QLQ++QSPYDADGIQ+AD
Sbjct: 61  PQPFDINNI-----DEHQKSLALEALVAKMFASVSCVKAAYAQLQYSQSPYDADGIQAAD 115

Query: 124 QLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKD 183
           Q VVSELK LSELKQCY+KKQFD SPE  +V A++QE KSL KTYE+MGKKLESQL+LK+
Sbjct: 116 QFVVSELKNLSELKQCYIKKQFDPSPETALVLADVQEQKSLSKTYEVMGKKLESQLRLKE 175

Query: 184 SEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSF 243
           SEI++L+EK+EESN+QN+ LEKR+N+SG L MPDN+ L GLSPSHF TVL HTVKSIRSF
Sbjct: 176 SEIMYLREKMEESNRQNRLLEKRLNKSGHLSMPDNLRLPGLSPSHFITVLLHTVKSIRSF 235

Query: 244 VRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQ 303
           V+LMIDE+KS GWD+DAAA  I  +V Y RAD KCFAFESFV REMFD FH  N+SP K+
Sbjct: 236 VKLMIDEMKSTGWDLDAAAKCIVSDVAYRRADDKCFAFESFVSREMFDGFHLTNFSPQKE 295

Query: 304 HQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFF 363
              +++ Q   QQLFF+RF ELK  KA E+++ KPKS+FAKFCRAKY Q+IHP+ME++FF
Sbjct: 296 SPPEKKNQ---QQLFFKRFVELKSTKATEYIAHKPKSTFAKFCRAKYLQLIHPQMETSFF 352

Query: 364 GDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYM 423
           G+LS+R+++NSGEFPD+ FF++FA+MA+RVWLLHCLA+SFDPEASIFQV +G RFSEVYM
Sbjct: 353 GNLSKRSLVNSGEFPDTIFFTTFAEMARRVWLLHCLAYSFDPEASIFQVRRGCRFSEVYM 412

Query: 424 ESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLSP 482
           E VAE+A LSS   P                 +P VAFT+VPGFRIGKTV+QCQVYLSP
Sbjct: 413 ECVAEDALLSSENAP---------------DVDPSVAFTVVPGFRIGKTVIQCQVYLSP 456

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549645|ref|XP_003543202.1| PREDICTED: uncharacterized protein LOC100799419 isoform 1 [Glycine max] gi|356549647|ref|XP_003543203.1| PREDICTED: uncharacterized protein LOC100799419 isoform 2 [Glycine max]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/481 (61%), Positives = 383/481 (79%), Gaps = 33/481 (6%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKV-KDNTVKPKDKFKDDHQAAGVAI 62
           KPSAVTP K +LAR+FAKVLH++++ G+A VDG+  V  D  +K + K         +A 
Sbjct: 5   KPSAVTPRK-KLARSFAKVLHVKALIGIASVDGLKNVISDANLKDEGK---------IAK 54

Query: 63  KPPKVSWSQLFGKEDTE-LEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQS 121
               ++WS+ F ++D E L+ R++ EA LAKLFASISTVK++Y +LQHAQSP+D DGI++
Sbjct: 55  SKTTLNWSESFNEDDDEELQERVANEALLAKLFASISTVKAAYAELQHAQSPFDPDGIEA 114

Query: 122 ADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKL 181
           ADQL+VSELK LSELKQCYLKKQFD  PEK +++AE +EL+ ++KTYEIMG+KLESQ++L
Sbjct: 115 ADQLLVSELKNLSELKQCYLKKQFDPLPEKEILAAESKELQGVIKTYEIMGRKLESQVRL 174

Query: 182 KDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIR 241
           KDSEIIFL+EKLEE+N  NKA+EKR+NQSGQL + DN+H++GLSPSHF  VLRH V+SIR
Sbjct: 175 KDSEIIFLREKLEEANMHNKAIEKRLNQSGQLSVLDNLHITGLSPSHFIMVLRHAVRSIR 234

Query: 242 SFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPA 301
           +FVRL++DE++SAGWDIDAA ++I+ NVVY   DHKCFA E+FVCREMFDAFH PN+S +
Sbjct: 235 NFVRLVVDEMRSAGWDIDAAVDAIEQNVVYMAEDHKCFAMEAFVCREMFDAFHIPNFSLS 294

Query: 302 KQHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESA 361
               +   ++ +RQQ FF +FNELK +KAK++L+ +P+SSFAK+CR KY  ++HPKMES+
Sbjct: 295 ---SESPLEKNRRQQWFFGKFNELKSMKAKDYLAERPRSSFAKYCRVKYLGLVHPKMESS 351

Query: 362 FFGDLSQRNVINS-GEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSE 420
           FFG+LSQRN++N+ G FPD+AFF+SFA+MAKRVWLLHCLAFS++PEASIFQV KG RFS+
Sbjct: 352 FFGNLSQRNLVNTGGGFPDTAFFTSFAEMAKRVWLLHCLAFSYEPEASIFQVEKGCRFSD 411

Query: 421 VYMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYL 480
           VYMESV +E FL S                    ++P+VAFT+VPGFRIGKTVLQCQVYL
Sbjct: 412 VYMESVNDEIFLYSEVE-----------------SDPQVAFTVVPGFRIGKTVLQCQVYL 454

Query: 481 S 481
           +
Sbjct: 455 T 455

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544104|ref|XP_003540495.1| PREDICTED: uncharacterized protein LOC100810236 [Glycine max]

 Score =  599 bits (1545), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 290/479 (60%), Positives = 375/479 (78%), Gaps = 30/479 (6%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           KPSAVTP K +LAR FAKVLH++++ G+A VDG+  V  +        KD+     +   
Sbjct: 5   KPSAVTPRK-KLARNFAKVLHVKALIGIASVDGLKNVISDA-----NLKDE---GNIGKS 55

Query: 64  PPKVSWSQLFGKEDTE-LEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSA 122
              ++WS+ F ++D E L+ R + EA LAKLFASISTVK++Y +LQ+AQSP+D DGI++A
Sbjct: 56  KATLNWSESFNEDDDEDLQEREANEALLAKLFASISTVKAAYAELQYAQSPFDPDGIEAA 115

Query: 123 DQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLK 182
           DQL+VSELK LSELKQCYLKKQFD SP+  ++ AE +EL+ ++KTYEIMGKKLESQ++LK
Sbjct: 116 DQLLVSELKNLSELKQCYLKKQFDPSPKTAILEAESKELQGVIKTYEIMGKKLESQVRLK 175

Query: 183 DSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRS 242
           DSEIIFL+EKLEE+N+QNKA+EKR+NQSGQL   DN+H++GLSPSHF TVLRHTV+SIR+
Sbjct: 176 DSEIIFLREKLEEANRQNKAIEKRLNQSGQLSGLDNLHITGLSPSHFITVLRHTVRSIRN 235

Query: 243 FVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAK 302
           FVRL++DE++ AGWD+DA  ++I+ NVVY   DHKCFA E+FVCREMFDAFH PN++ + 
Sbjct: 236 FVRLIVDEMRYAGWDVDATVDAIEQNVVYMAEDHKCFAIEAFVCREMFDAFHIPNFALS- 294

Query: 303 QHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAF 362
              +    + +RQQ FF +FNE+K +KAK +L+ KP+SSFAKFCR KY +++HPKMES+F
Sbjct: 295 --SESLLDKNRRQQWFFGKFNEMKSMKAKYYLAEKPRSSFAKFCRVKYSRLVHPKMESSF 352

Query: 363 FGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVY 422
           FG+ S RN++N+G FPD+ FF+SFA+MAKRVWLLHCLAFS++P+ASIFQV KG RFS+VY
Sbjct: 353 FGNQSHRNLVNAGGFPDTEFFASFAEMAKRVWLLHCLAFSYEPQASIFQVGKGCRFSDVY 412

Query: 423 MESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLS 481
           MESV +E FL S                    ++P+VAFT+VPGFRIGKTVLQCQVYLS
Sbjct: 413 MESVNDEVFLYSEV-----------------ESDPQVAFTVVPGFRIGKTVLQCQVYLS 454

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567094|ref|XP_002524529.1| conserved hypothetical protein [Ricinus communis] gi|223536203|gb|EEF37856.1| conserved hypothetical protein [Ricinus communis]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/484 (63%), Positives = 383/484 (79%), Gaps = 28/484 (5%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           K SA+TP KS+ AR  AKVLH+R+ TGVAPVDGV KVK       DKF            
Sbjct: 5   KLSAMTPKKSKFARAVAKVLHLRAATGVAPVDGVQKVKSQERVKDDKF----------CT 54

Query: 64  PPKVSWSQLFG-KEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSA 122
              V+W+Q F   ED EL+  ++ EA LAKLFAS+S++K++Y QLQ AQSPYD DGIQ+A
Sbjct: 55  KDTVNWAQSFKFSEDEELQKSLATEALLAKLFASVSSIKAAYAQLQCAQSPYDVDGIQAA 114

Query: 123 DQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLK 182
           DQLVVSELK LSELKQCY+KKQFD SP+ TMV AE+QE KS+ KTYEIMG KLESQL+LK
Sbjct: 115 DQLVVSELKNLSELKQCYIKKQFDPSPDTTMVLAELQEQKSVSKTYEIMGNKLESQLRLK 174

Query: 183 DSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRS 242
           DSEI++L+EKLEES++ N+ L+KR+N+SGQL + DN+H S LSPSHF  V+R TVKSI+S
Sbjct: 175 DSEIMYLREKLEESSRHNQLLDKRLNRSGQLSVLDNLHQSRLSPSHFTAVVRFTVKSIQS 234

Query: 243 FVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAK 302
           FV+LMID++K+A WD+DAAANSI P+VVY+RAD KCFAFESFVCRE+FD FH PN+S   
Sbjct: 235 FVKLMIDQMKAADWDLDAAANSIVPDVVYWRADDKCFAFESFVCREIFDGFHLPNFSLPS 294

Query: 303 QHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAF 362
           +    +++ Q   QLFF+RF EL+ VKAK++L++KPKS+FAKFCRAKY Q++HP+ME++F
Sbjct: 295 ESSLLERKNQ--NQLFFKRFTELRSVKAKDYLAQKPKSTFAKFCRAKYLQLVHPQMETSF 352

Query: 363 FGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVY 422
           FG+LSQR+++NSG FPD+ FF+SF+++AKRVW+LHCLAFSF+PEASIFQV+KG RFSEVY
Sbjct: 353 FGNLSQRSLVNSGGFPDTTFFTSFSELAKRVWILHCLAFSFEPEASIFQVSKGCRFSEVY 412

Query: 423 MESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLSP 482
           ME VAE+A LSS  N QE              A+P VAFT+ PGFRIGKT++QCQVYLSP
Sbjct: 413 MECVAEDALLSSG-NAQE--------------ADPPVAFTVFPGFRIGKTIIQCQVYLSP 457

Query: 483 ARNE 486
            +++
Sbjct: 458 TKSK 461

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637747|gb|ACU19196.1| unknown [Glycine max]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/479 (60%), Positives = 375/479 (78%), Gaps = 30/479 (6%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           KPSAVTP K +LAR FAKVLH++++ G+A VDG+  V  +        KD+     +   
Sbjct: 5   KPSAVTPRK-KLARNFAKVLHVKALIGIASVDGLKNVISDA-----NLKDE---GNIGKS 55

Query: 64  PPKVSWSQLFGKEDTE-LEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSA 122
              ++WS+ F ++D E L+ R + EA LAKLFASISTVK++Y +LQ+AQSP+D DGI++A
Sbjct: 56  KATLNWSESFNEDDDEDLQEREANEALLAKLFASISTVKAAYAELQYAQSPFDPDGIEAA 115

Query: 123 DQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLK 182
           DQL+VSELK LSELKQCYLKKQFD SP+ T++ AE +EL+ ++KTYEIMGKKLESQ++LK
Sbjct: 116 DQLLVSELKNLSELKQCYLKKQFDPSPKTTILEAESKELQGVIKTYEIMGKKLESQVRLK 175

Query: 183 DSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRS 242
           DSEIIFL+EKLEE+N+QNKA+EKR+NQSGQL   DN+H++GLSPSHF TVLRHTV+SIR+
Sbjct: 176 DSEIIFLREKLEEANRQNKAIEKRLNQSGQLSGLDNLHITGLSPSHFITVLRHTVRSIRN 235

Query: 243 FVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAK 302
           FVRL++DE++ AGWD+DA  ++I+ NVVY   DHKCFA E+FVCREMFDAFH PN++ + 
Sbjct: 236 FVRLIVDEMRYAGWDVDATVDAIEQNVVYMAEDHKCFAIEAFVCREMFDAFHIPNFALS- 294

Query: 303 QHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAF 362
              +    + +RQQ FF +FNE+K ++AK +L+ K +SSFAKFCR KY +++HPK+ES+F
Sbjct: 295 --SESLLDKNRRQQWFFGKFNEMKSMRAKYYLAEKSRSSFAKFCRVKYSRLVHPKVESSF 352

Query: 363 FGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVY 422
           FG+ S RN++N+G FPD+ FF+SFA+MAKRVWLLHCLAFS++P+ASIFQV KG RFS+VY
Sbjct: 353 FGNQSHRNLVNAGGFPDTEFFASFAEMAKRVWLLHCLAFSYEPQASIFQVGKGCRFSDVY 412

Query: 423 MESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLS 481
           MESV +E FL S                    ++P+VAFT+VPGFRIGKTVLQCQVYLS
Sbjct: 413 MESVNDEVFLYSEV-----------------ESDPQVAFTVVPGFRIGKTVLQCQVYLS 454

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147796417|emb|CAN72546.1| hypothetical protein VITISV_013476 [Vitis vinifera]

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 301/476 (63%), Positives = 370/476 (77%), Gaps = 34/476 (7%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           K SAVTP+KSRLARTFAKVLH+R VTGVAPVDG+ K+K       +  KDD  A      
Sbjct: 16  KRSAVTPSKSRLARTFAKVLHLRMVTGVAPVDGIQKIK-----APESSKDDQDAG----- 65

Query: 64  PPKVSWS--QLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQS 121
               SWS  Q +   D +L     LEA LA+LFASIS+VKS+Y QLQ+AQSPYD++GIQS
Sbjct: 66  ----SWSRSQSYDDNDEKLRNTAELEAHLAQLFASISSVKSAYAQLQYAQSPYDSNGIQS 121

Query: 122 ADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKL 181
           ADQ+VVSELK LSELK+CYLKKQFD SP +T+  AEIQE KSLLKTYEIM KKLE Q+KL
Sbjct: 122 ADQIVVSELKNLSELKRCYLKKQFDPSPGRTLCLAEIQEQKSLLKTYEIMRKKLECQMKL 181

Query: 182 KDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIR 241
           KDSEI FL+EKLE+ +KQNK+LEKR+N S  L + DN+HLSG+SPSHF TVL+HTVKSIR
Sbjct: 182 KDSEITFLREKLEDCHKQNKSLEKRLNPSAHLSVLDNLHLSGISPSHFITVLQHTVKSIR 241

Query: 242 SFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPA 301
           SFVRLMI+E++S+GWDI+AAA +IQP+VV+ +A H+C AFESFVCREMFD+FH+PN+S  
Sbjct: 242 SFVRLMINEMESSGWDINAAAAAIQPSVVFLKATHRCLAFESFVCREMFDSFHFPNFSLP 301

Query: 302 KQHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESA 361
               +   +Q Q Q+ FF+RF +LK  + KE+L++KPKS+F KFCRAKY +++HPKMES+
Sbjct: 302 ---NESLPEQNQWQRFFFERFIKLKSTRVKEYLAQKPKSTFGKFCRAKYLKLVHPKMESS 358

Query: 362 FFGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEV 421
           FFG+LSQR+++NSG+FPD+ FF+SF++MAKRVWLLHCLAFSF+PEA IFQVNKG  FSEV
Sbjct: 359 FFGNLSQRSIVNSGKFPDTPFFTSFSEMAKRVWLLHCLAFSFNPEAKIFQVNKGCPFSEV 418

Query: 422 YMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQ 477
           YMES+ +E        P+  S               RVAFT+VPGFRIGKTV+QCQ
Sbjct: 419 YMESIIDEPSPPPDCPPETHS---------------RVAFTVVPGFRIGKTVIQCQ 459

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517048|ref|XP_003527202.1| PREDICTED: uncharacterized protein LOC100818091 isoform 1 [Glycine max] gi|356517050|ref|XP_003527203.1| PREDICTED: uncharacterized protein LOC100818091 isoform 2 [Glycine max]

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/480 (61%), Positives = 375/480 (78%), Gaps = 38/480 (7%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           KPSAVTP+KS+LARTFAKVLH+R+VTG+APVDG+  VK +         ++      AI 
Sbjct: 5   KPSAVTPSKSKLARTFAKVLHVRAVTGIAPVDGLKNVKVDA-----DLSNEANMCKSAI- 58

Query: 64  PPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSAD 123
                       ED EL+ R + EA LAK FASISTVK+SY QLQ+AQSPYD DGIQ AD
Sbjct: 59  ----------NIEDEELQERKATEALLAKTFASISTVKASYAQLQNAQSPYDPDGIQVAD 108

Query: 124 QLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKD 183
           QL+VSE K LSELKQCY KKQFD  P++ +++A+++EL+S+ KT+EI GKKLESQ  LKD
Sbjct: 109 QLIVSEFKTLSELKQCYFKKQFDPLPDRAILAAKLKELQSVNKTFEITGKKLESQAGLKD 168

Query: 184 SEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSF 243
           SEIIFL+EKLEE+N  NK++EKR+NQSG L + DN+H+SGLSPSHF TVLRHTV+SIRSF
Sbjct: 169 SEIIFLQEKLEEANVHNKSIEKRLNQSGSLSVLDNLHMSGLSPSHFVTVLRHTVRSIRSF 228

Query: 244 VRLMIDELKSAGWDIDAAANS-IQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAK 302
           V+L+++E++SAGWDIDA+ N+ I+ NVVY + DHKCFA ESFVCREMFD+F++PN+S   
Sbjct: 229 VKLLVNEMRSAGWDIDASVNAIIEQNVVYLKEDHKCFAIESFVCREMFDSFNFPNFSLP- 287

Query: 303 QHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAF 362
               +    + ++QLFF RFNELKPVKAK+FL+ KP+S FAKFCR KY +++HPKME++F
Sbjct: 288 ---NESLPDKNKRQLFFGRFNELKPVKAKDFLAGKPRSPFAKFCRNKYLRLVHPKMEASF 344

Query: 363 FGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFDPEASIFQVNKG-SRFSEV 421
           FG+L+QR ++N+GEFPD+ FF+SFA+MAKRVWLLHCLAFSF+P+ASIFQV KG  RFS+V
Sbjct: 345 FGNLNQRTLLNAGEFPDTNFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVGKGCCRFSDV 404

Query: 422 YMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLS 481
           YMESV          N  + ++L P + S     EP+VAFT+VPGFRIGKTV+QCQVYLS
Sbjct: 405 YMESV----------NENDEAAL-PVVES-----EPQVAFTVVPGFRIGKTVIQCQVYLS 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543213|ref|XP_003540057.1| PREDICTED: uncharacterized protein LOC100795678 [Glycine max]

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 293/480 (61%), Positives = 375/480 (78%), Gaps = 39/480 (8%)

Query: 4   KPSAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIK 63
           KPSAVTP+KS+LARTFAKVLH+R+VTG+APVDG+  VK +         D +  A     
Sbjct: 9   KPSAVTPSKSKLARTFAKVLHVRAVTGIAPVDGLKNVKVDA--------DLNNEANKCK- 59

Query: 64  PPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSAD 123
                 S L  +ED EL+ R + EA LAK FASISTVK+SY QLQ+AQSPYD DGIQ+AD
Sbjct: 60  ------SALNNEEDEELQERKATEALLAKTFASISTVKASYAQLQNAQSPYDPDGIQAAD 113

Query: 124 QLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKD 183
           QL+VSE K LSELKQCY KKQFD  P + +++A+++EL+S+ +T+EIMGKKLESQ +LK+
Sbjct: 114 QLIVSEFKTLSELKQCYFKKQFDPLPARAILAAKLKELQSVNRTFEIMGKKLESQARLKE 173

Query: 184 SEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSF 243
           SEIIFL+EKLEE+N  N+++EKR+NQSG L + DN+H+SGLSPSHF TVLRHTV+SIRSF
Sbjct: 174 SEIIFLREKLEEANVHNRSIEKRLNQSGSLSVLDNLHMSGLSPSHFVTVLRHTVRSIRSF 233

Query: 244 VRLMIDELKSAGWDIDAAANSI-QPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAK 302
           V+L+++E++SAGWDIDA+  +I + NVVY++ DHKCFA ESFVCREMFD+F++PN+S   
Sbjct: 234 VKLLVNEMRSAGWDIDASVKAIMEQNVVYWKEDHKCFAIESFVCREMFDSFNFPNFSLP- 292

Query: 303 QHQQQQQQQQQRQQLFFQRFNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAF 362
               +    + R+QLFF RFNELKP KAK+FL+ KP+S FAKFCR KY +++HPKME++F
Sbjct: 293 ---NESLPDRNRRQLFFGRFNELKPEKAKDFLAGKPRSPFAKFCRIKYLRLVHPKMEASF 349

Query: 363 FGDLSQRNVINSGEFPDSAFFSSFADMAKRVWLLHCLAFSFD-PEASIFQVNKGSRFSEV 421
           FG+L+QR+++N+GEFP++ FF+SFA+MAKRVWLLHCLAFSF+ P+ASIFQV K  RFS+V
Sbjct: 350 FGNLNQRSLLNAGEFPNTNFFTSFAEMAKRVWLLHCLAFSFEPPQASIFQVGKWCRFSDV 409

Query: 422 YMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQCQVYLS 481
           YMESV E    +  E P ES              E ++AFT+VPGFRIGKTV+QCQVYLS
Sbjct: 410 YMESVNE----NDEEMPVES--------------ETQIAFTVVPGFRIGKTVIQCQVYLS 451

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	487
TAIR|locus:2009670	453	AT1G53380 "AT1G53380" [Arabido	0.817	0.878	0.561	5.1e-123
TAIR|locus:2086365	475	AT3G14870 "AT3G14870" [Arabido	0.934	0.957	0.528	1.3e-121
TAIR|locus:2030012	459	UNE1 "AT1G29300" [Arabidopsis	0.809	0.858	0.405	1.4e-73
TAIR|locus:2050891	425	AT2G45260 "AT2G45260" [Arabido	0.700	0.802	0.379	1.4e-68
TAIR|locus:2101891	499	AT3G60680 "AT3G60680" [Arabido	0.798	0.779	0.288	1.3e-43
TAIR|locus:2124326	270	AT4G34080 "AT4G34080" [Arabido	0.535	0.966	0.347	5.3e-40
TAIR|locus:2154583	559	GIL1 "AT5G58960" [Arabidopsis	0.720	0.627	0.272	7e-39
TAIR|locus:2119226	292	AT4G33320 "AT4G33320" [Arabido	0.441	0.736	0.383	8.9e-38
TAIR|locus:2064432	519	AT2G30380 "AT2G30380" [Arabido	0.377	0.354	0.297	1e-22
TAIR|locus:2045442	157	AT2G32130 "AT2G32130" [Arabido	0.299	0.929	0.375	9.6e-20

TAIR|locus:2009670 AT1G53380 "AT1G53380" [Arabidopsis thaliana (taxid:3702)]

 Score = 1137 (405.3 bits), Expect = 5.1e-123, Sum P(2) = 5.1e-123
 Identities = 233/415 (56%), Positives = 282/415 (67%)

Query:    70 SQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADXXXXXX 129
             S+ F K + E E    LEA LAKLFA++S++K++Y QLQH+QSPYD+ GIQ AD      
Sbjct:    51 SESFYKLEEEYERSQGLEALLAKLFATVSSIKAAYAQLQHSQSPYDSIGIQKADNLVVAE 110

Query:   130 XXXXXXXXXCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFL 189
                      C++KKQ D +PE+T+V AEIQEL+SLLKTYEIMGKKLESQ KLKDSEIIFL
Sbjct:   111 LKTLSELKQCFMKKQVDPNPERTLVLAEIQELRSLLKTYEIMGKKLESQYKLKDSEIIFL 170

Query:   190 KEKLEESNKQNKALEKRMNQSGQLVMP-DNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMI 248
             +EKL+ES KQNK  EKR+NQSGQL  P DN+HLS L+P+HF T L HTVKS R FV+LMI
Sbjct:   171 REKLDESMKQNKLTEKRLNQSGQLCNPLDNLHLSALNPTHFVTYLHHTVKSTRGFVKLMI 230

Query:   249 DELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKXXXXXX 308
             +++K AGWDI +AANSI P V YY+ DHKCF FE FV   MF+AFH P +S +       
Sbjct:   231 EQMKLAGWDISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSESRSYK 290

Query:   309 XXXXXXXXXXXXXXN--ELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDL 366
                              EL+ +KAK++L+ +PKS FA+FCRAKY Q+IHPKME AFFG L
Sbjct:   291 KKKQSNADREMFFERFKELRSMKAKDYLTARPKSRFARFCRAKYLQLIHPKMEQAFFGHL 350

Query:   367 SQRNVINSGEFPXXXXXXXXXXMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESV 426
               RN +++GEFP          MAKR+WLLHCLA SF+ EA IF+V KG RFSEVYM+SV
Sbjct:   351 HLRNQVSAGEFPETSLFSGFLEMAKRIWLLHCLALSFEREAEIFRVPKGCRFSEVYMKSV 410

Query:   427 AEEAFXXXXXXXXXXXXXXXXXXXXXXXXXXRVAFTIVPGFRIGKTVLQCQVYLS 481
             AEEAF                          RVAFT+VPGFRIGKT +QC+VYLS
Sbjct:   411 AEEAFFPAAESSPESEP--------------RVAFTVVPGFRIGKTSIQCEVYLS 451

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006857 "oligopeptide transport" evidence=RCA

TAIR|locus:2086365 AT3G14870 "AT3G14870" [Arabidopsis thaliana (taxid:3702)]

 Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
 Identities = 254/481 (52%), Positives = 318/481 (66%)

Query:     4 KP-SAVTPAKSRLARTFAKVLHIRSVTGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAI 62
             KP   V+  K +L RTFAKV++++ +TGV P +G +KV +   K ++K K D   A  A 
Sbjct:     9 KPLDVVSSGKGKLRRTFAKVINMKKLTGVVP-EGNNKV-ERVKKSQEKVKLDKDLAKNA- 65

Query:    63 KPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSA 122
                  + S+ F K + E E R+++EA LAKLFA+IS++KS Y QLQ+AQSPYD +GIQ A
Sbjct:    66 ----ANLSESFDKLEEEYEKRLAMEALLAKLFATISSIKSGYAQLQYAQSPYDPNGIQKA 121

Query:   123 DXXXXXXXXXXXXXXXCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLK 182
             D                +LKKQ D +P++T+V AEIQEL+S+LKTYEIMGKKLE QLKLK
Sbjct:   122 DNLVVAELKTLSELKQSFLKKQLDPNPDRTLVLAEIQELRSVLKTYEIMGKKLECQLKLK 181

Query:   183 DSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMP-D-NVHLSGLSPSHFNTVLRHTVKSI 240
             DSEIIFLKEK +ES  QNK +EKR+NQSGQL  P D N+HLS +S +HF T L HTVKSI
Sbjct:   182 DSEIIFLKEKFQESMTQNKLMEKRLNQSGQLCNPLDHNLHLSAVSSTHFVTYLHHTVKSI 241

Query:   241 RSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSP 300
             R FV+LM++++K A WDID AA  IQP+V+YY+ DHKCFA E +VC+ M +AF  P +S 
Sbjct:   242 RGFVKLMVEQMKLAAWDIDMAAELIQPDVLYYKQDHKCFALEHYVCKIMLEAFQLPYFS- 300

Query:   301 AKXXXXXXXXXXXXXXXXXXXXNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMES 360
                                    EL+ +K +E+L+ +PKS  AKFCR KY Q+IHPKME 
Sbjct:   301 ---NESSKKTSREDKAMFFERFTELRSMKPREYLASRPKSRLAKFCRTKYLQLIHPKMEQ 357

Query:   361 AFFGDLSQRNVINSGEFPXXXXXXXXXXMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSE 420
             AFFG L QRN + +GEFP          MAKRVWLLHCLAFSFDPEASIFQV++G RFSE
Sbjct:   358 AFFGHLHQRNQVTAGEFPETSLCTAFLEMAKRVWLLHCLAFSFDPEASIFQVSRGCRFSE 417

Query:   421 VYMESVAEEAFXXXXXXXXXXXXXXXXXXXXXXXXXXRVAFTIVPGFRIGKTVLQCQVYL 480
             VYM+SV+EEAF                           VAFT+VPGFRIGKT +QC+VYL
Sbjct:   418 VYMKSVSEEAFFSPEQEESSSETEPG------------VAFTVVPGFRIGKTTIQCEVYL 465

Query:   481 S 481
             S
Sbjct:   466 S 466

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2030012 UNE1 "AT1G29300" [Arabidopsis thaliana (taxid:3702)]

 Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
 Identities = 171/422 (40%), Positives = 252/422 (59%)

Query:    12 KSRLARTFAKVLHIRSV-TGVAPVDGVDKVKDNTVKPKDKFKDDHQAAGVAIKPPKVSWS 70
             KS+LARTF KV ++R+  T V+  +G+      +  P   F DD    G ++   K + S
Sbjct:    13 KSKLARTFQKVCNLRTTSTKVSSNNGIGICMLKSQNPN--F-DDEDDDGDSVFDLKSTSS 69

Query:    71 QLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADXXXXXXX 130
                G+       R  L+A +AK+FAS +++K++Y +LQ AQ PYD D IQ+AD       
Sbjct:    70 SRSGEIKVRERNRAVLQAVVAKIFASTTSIKAAYAELQMAQRPYDNDAIQAADTAVVEEL 129

Query:   131 XXXXXXXXCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLK 190
                      +L+K+ + SP+  ++ AEIQE +SL++TYEI  KKLE ++  K  +I  LK
Sbjct:   130 RALSELKRSFLRKELNLSPQVAIMLAEIQEQQSLMRTYEITIKKLEFEVTEKQLKIDELK 189

Query:   191 EKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDE 250
                EES   NK+LEK+++ SG + + DN+ +  L+ S F  VL  T++S+RSFV+L++ E
Sbjct:   190 MSFEESLVVNKSLEKKLSASGSVSVFDNIEIRNLNLSSFVQVLGFTLRSVRSFVKLIVKE 249

Query:   251 LKSAGWDIDAAANS-IQPNV-----VYYRADHKCFAFESFVCREMFDAFHYPNYSPAKXX 304
             ++SA WD+DAAA++ +  NV     V+ R  H+CFAFESFVC +MF+ F  P++S  +  
Sbjct:   250 MESASWDLDAAASAAVSVNVKNASTVFARPSHRCFAFESFVCGKMFENFGAPDFSRREEF 309

Query:   305 XXXXXXXXXXXXXXXXXXNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFG 364
                                +L+ V   ++L+R P SSFA+F   KY  V+H KME +FFG
Sbjct:   310 ------------------EKLRSVDPIQYLTRNPGSSFARFVVHKYLSVVHAKMECSFFG 351

Query:   365 DLSQRNVINSGEFPXXXXXXXXXXMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYME 424
             +L+QR ++NSG FP          MAKR+WLLHCLAFS     ++FQ+ +G RFS+VYME
Sbjct:   352 NLNQRKLVNSGGFPDSGFFATFCEMAKRIWLLHCLAFSLSGNVTVFQLKRGCRFSQVYME 411

Query:   425 SV 426
             SV
Sbjct:   412 SV 413

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

TAIR|locus:2050891 AT2G45260 "AT2G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 650 (233.9 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
 Identities = 134/353 (37%), Positives = 206/353 (58%)

Query:    85 SLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADXXXXXXXXXXXXXXXCYLK-- 142
             ++EA ++ LF +IS++KS+Y++LQ A +PYD + IQ+AD                Y +  
Sbjct:    35 AMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLSEMKHFYRENN 94

Query:   143 -KQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNK 201
              K    SP+ + ++AEIQE +SLLKTYE+M KK +S+++ KDSEI  + +K+EE+N++  
Sbjct:    95 PKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRL 154

Query:   202 ALEKRMNQSGQLVMPD-----NVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGW 256
              LEK +   G           N+    L+   + +      K++  F + +I+ +K+AGW
Sbjct:   155 KLEKNLKLRGMSTNEGSNGDGNMQFPDLTTELYVSTYEAAAKAVHDFSKPLINMMKAAGW 214

Query:   257 DIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSP-AKXXXXXXXXXXXXX 315
             D+D+AANSI+P+VVY +  HK +AFES++C+ MF  F   N+S  ++             
Sbjct:   215 DLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSESAAVMANDDTDTF 274

Query:   316 XXXXXXXNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSG 375
                     ++ P+ A   L   P S+F  FCR+KY  ++HPKME++FFG+L QR+ +  G
Sbjct:   275 FRQFLALKDMDPLDA---LGTNPDSNFGIFCRSKYLLLVHPKMEASFFGNLDQRDYVTGG 331

Query:   376 EFPXXXXXXXXXXMAKRVWLLHCLAFSFDPEASIFQVNKGSRFSEVYMESVAE 428
               P          +AK +W+LH LA+SFDP A IFQV KGS FS+ YMESV +
Sbjct:   332 GHPRTAFYQAFLKLAKSIWILHRLAYSFDPAAKIFQVKKGSEFSDSYMESVVK 384

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2101891 AT3G60680 "AT3G60680" [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 123/426 (28%), Positives = 202/426 (47%)

Query:    62 IKPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQS 121
             +KP +   SQ+  K DT++   +SL   ++ +FA+ S+ ++SY+QLQ A +P+  + +++
Sbjct:   100 VKPNQKKLSQV-RKLDTQMG--LSL---ISSVFATASSFEASYLQLQAAHAPFVEENVKA 153

Query:   122 ADXXXXXXXXXXXXXXXCY--LKKQFDFSPEKTMVS---AEIQELKSLLKTYEIMGKKLE 176
             AD                Y   ++  DF  +  + S   + +QE +S L+  E +  +L+
Sbjct:   154 ADRALVSNLQKLSDLKQFYRNYRQSLDFESDLAIGSCLESRVQENQSKLRALETVSNRLQ 213

Query:   177 SQLKLKDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHT 236
             +++  KD ++  L+ KL E  K    L KR++ +  L   D +    LS   F ++L   
Sbjct:   214 AEMDAKDLQVWSLRNKLGEIQKSTSKLSKRLSSNSSL---DVL----LSVRVFESLLYDA 266

Query:   237 VKSIRSFVRLMIDELKSAGWDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYP 296
              K+ + F +++I+ ++ AGWD+D  A S+ P V Y +  H  +A  S+VC  MF  F   
Sbjct:   267 FKATQKFTKILIELMEKAGWDLDLVAKSVHPEVDYAKERHNRYALLSYVCLGMFRGFDGE 326

Query:   297 NYSPAKXXXXXXXXXXXXXXXXXXXXN-ELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIH 355
              +   +                    +    P+   E L R    +F++FC  KY ++IH
Sbjct:   327 GFDLNENDYEESERSSVDSSLRELMQHVSSNPM---ELLDRDKDCAFSRFCDKKYHELIH 383

Query:   356 PKMESAFFGDLSQRNVINSGEFPXXXXXXXXXXMAKRVWLLHCLAFSFDPEASIFQVNKG 415
             P M S+ F ++ +   + S              MA  +W LH LA SFDP   IFQV  G
Sbjct:   384 PNMASSIFSNMDENEAVLSSWRSLSTFYESFVTMASSIWTLHKLALSFDPAVEIFQVESG 443

Query:   416 SRFSEVYMESVAEEAFXXXXXXXXXXXXXXXXXXXXXXXXXXRVAFTIVPGFRIGKTVLQ 475
               FS V+ME+V +                             +V FT+VPGF+IG TV+Q
Sbjct:   444 VEFSIVFMENVLKRK---------------QDKKFSMSPTRAKVGFTVVPGFKIGCTVIQ 488

Query:   476 CQVYLS 481
             CQVYL+
Sbjct:   489 CQVYLT 494

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005777 "peroxisome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

TAIR|locus:2124326 AT4G34080 "AT4G34080" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 95/273 (34%), Positives = 150/273 (54%)

Query:    86 LEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADXXXXXXXXXXXXXXXCYLK--- 142
             +EA ++ LF +IS++KS+Y++LQ A +PYD + IQ+AD                Y +   
Sbjct:     1 MEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLSEMKHFYRENNP 60

Query:   143 KQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKA 202
             K    SP+ + ++AEIQE +SLLKTYE+M KK +S+++ KDSEI  + +K+EE+N++   
Sbjct:    61 KPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLK 120

Query:   203 LEKRMNQSGQLVMPD-----NVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWD 257
             LEK +   G           N+    L+   F +      K +  F + +I+ +K+AGWD
Sbjct:   121 LEKNLKLRGMSTNQGSGGDGNLQFPDLTTELFVSTYEAAAKVVHDFSKPLINMMKAAGWD 180

Query:   258 IDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYSP-AKXXXXXXXXXXXXXX 316
             +D AANSI+P+VVY +  HK +AFES++C+ MF  F   N+S  ++              
Sbjct:   181 LDTAANSIEPDVVYAKRPHKEYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTFF 240

Query:   317 XXXXXXNELKPVKAKEFLSRKPKSSFAKFCRAK 349
                    ++ P+ A   L   P S+F  FCR+K
Sbjct:   241 RQFLALKDMDPLDA---LGTNPDSNFGIFCRSK 270

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2154583 GIL1 "AT5G58960" [Arabidopsis thaliana (taxid:3702)]

 Score = 383 (139.9 bits), Expect = 7.0e-39, Sum P(2) = 7.0e-39
 Identities = 101/371 (27%), Positives = 170/371 (45%)

Query:    74 GKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADXXXXXXXXXX 133
             G+    +E    +E  + ++F + + +K +YV LQ A SP+D + +  AD          
Sbjct:   148 GRNGVSVETVQEMEMVMDEVFTAAAAMKRAYVALQEAHSPWDPEKMHDADMAMVAELRRI 207

Query:   134 XXXXXCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKL 193
                   + + +   S  +    A    L+  +  YE + K+L+ ++K+KD+EI  LKEK+
Sbjct:   208 GSLRERFRRMRGTGSGGRRKNDAGRGMLREAVAPYEAVVKELKKEVKVKDTEIENLKEKV 267

Query:   194 EESNKQNK--ALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDEL 251
             + ++  N     + R+  S ++     + +S + P  F   +    ++ +SF  +++  +
Sbjct:   268 KVASMANGNGGKKHRLLSSRKVNCTTQIAVSPV-PELFEMTMIQVKEASKSFTGILLSLM 326

Query:   252 KSAGWDIDAAANSIQP--------NVVYYRAD--------HKCFAFESFVCREMFDAFHY 295
             ++A WDI AA  SI+         +   + +         H  FA ES++CR++F  F +
Sbjct:   327 RAAHWDIAAAVRSIEAASASSDGMSASSFASSVQSSVPNQHAKFALESYICRKIFQGFDH 386

Query:   296 PNYSPAKXXXXXXXXXXXXXXXXXXXXNELKPVKAKEFLSRKPKSSFAKFCRAKYCQVIH 355
               +                         ++K +   E L   P   F KFC  KY  +IH
Sbjct:   387 ETFY-MDGSLSSLINPDQYRRDCFAQFKDMKAMDPMELLGILPTCHFGKFCSKKYLSIIH 445

Query:   356 PKMESAFFGDLSQRNVINSGEFPXXXXXXXXXXMAKRVWLLHCLAFSFDPEASIFQVNKG 415
              KME + FGD  QR ++ +G  P          +AK VWLLH LAFS DP  S F+ N+G
Sbjct:   446 QKMEESLFGDSEQRELVVAGNHPRSQFYGEFLGLAKAVWLLHLLAFSLDPSPSHFEANRG 505

Query:   416 SRFSEVYMESV 426
             + F   YMESV
Sbjct:   506 AEFHSQYMESV 516

GO:0003674 "molecular_function" evidence=ND

GO:0009639 "response to red or far red light" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2119226 AT4G33320 "AT4G33320" [Arabidopsis thaliana (taxid:3702)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 86/224 (38%), Positives = 136/224 (60%)

Query:    85 SLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADXXXXXXXXXXXXXXXCYLK-- 142
             ++EA ++ LF +IS++KS+Y++LQ A +PYD + IQ+AD                Y +  
Sbjct:    11 AMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVNSELKNLSEMKHSYRENN 70

Query:   143 -KQFDFSPEKTMVSAEIQELKSLLKTY-EIMGKKLESQLKLKDSEIIFLKEKLEESNKQN 200
              K    SP+ + ++AEIQE +SLLKTY E+M KK +S+++ KDSEI  + +K+EE+NK+ 
Sbjct:    71 PKPVCVSPQDSRLAAEIQEQQSLLKTYYEVMVKKFQSEIQNKDSEITQMLQKIEEANKKR 130

Query:   201 KALEKRMNQSGQLVMPD-----NVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAG 255
               LEK +   G           N+    L+   F +      K++  F + +I+ +K+AG
Sbjct:   131 LKLEKNLKLRGMSTNEGSGGDGNLQFPDLTTELFVSTYEVAAKAVHDFSKPLINMMKAAG 190

Query:   256 WDIDAAANSIQPNVVYYRADHKCFAFESFVCREMFDAFHYPNYS 299
             WD+D+AANSI+P+VVY +  HK +AFES++C+ MF  F   N+S
Sbjct:   191 WDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFS 234

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064432 AT2G30380 "AT2G30380" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
 Identities = 60/202 (29%), Positives = 100/202 (49%)

Query:    90 LAKLFASISTVKSSYVQLQHAQSPYDADGIQSADXXXXXXXXXXXXXXXCYLKKQFDFSP 149
             ++KLF  +S++K +Y++ Q A  PYD D I  AD                YLK     + 
Sbjct:    76 ISKLFDIVSSLKLAYLEFQQAHLPYDPDKIIEADNLVVSQLEALRRIKRLYLKT-IQLNA 134

Query:   150 EKTMVSAE-IQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMN 208
             +KT ++A  +  L+  ++  E   +KL++Q++ K+SEI  L +K E    +N+ LE R+ 
Sbjct:   135 KKTEIAASCLDRLRYEIEVNEKHLEKLKAQVRAKESEIHSLIKKQECLVAENRKLENRI- 193

Query:   209 QSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAGWDIDAAANSIQPN 268
                            +S S F    R   KS+  F + +I  +K+  W+++ A  SI  N
Sbjct:   194 ---------------VSVSSFEFAFRAASKSVHDFAKPLITLMKATDWNLEKAVESIVGN 238

Query:   269 VVYYRADHKCFAFESFVCREMF 290
             V + +   K +AFES++ R MF
Sbjct:   239 VTFAKTSDKKYAFESYIVRRMF 260

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2045442 AT2G32130 "AT2G32130" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 9.6e-20, P = 9.6e-20
 Identities = 56/149 (37%), Positives = 90/149 (60%)

Query:    59 GVAIKPPKVSWSQLFGKEDTELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADG 118
             GV +   K S +  F  ED + +     +A +AK+FAS +++K++Y +LQ AQSPYD+D 
Sbjct:     9 GVGVGTFK-SQNPNFDDEDDDGD--CLFKAVVAKIFASTTSIKAAYAELQRAQSPYDSDA 65

Query:   119 IQSADXXXXXXXXXXXXXXXCYLKKQFDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQ 178
             IQ+AD                +++K+ + SP+  ++ AEI E +SL++TYEI  K+LE +
Sbjct:    66 IQAADTVVVNELKTLSELKRSFMRKELNLSPKVAIMLAEIHEQQSLMRTYEIAMKRLEFE 125

Query:   179 LKLKDSEIIFLKEKLEESNKQNKALEKRM 207
             +  K  +I  LK  LEE+   NK+LEK++
Sbjct:   126 VTEKKVKIDELKMNLEENLVMNKSLEKKL 154

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	487
pfam04859	132	pfam04859, DUF641, Plant protein of unknown functi	2e-48

>gnl|CDD|191114 pfam04859, DUF641, Plant protein of unknown function (DUF641)

 Score =  162 bits (412), Expect = 2e-48
 Identities = 69/122 (56%), Positives = 95/122 (77%)

Query: 85  SLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQ 144
           ++EA +AKLFA++S++K++Y QLQ A SPYD + IQ+AD  VV+ELK LSELK+ Y +K+
Sbjct: 10  AMEALIAKLFANVSSLKAAYAQLQQAHSPYDPEKIQAADAAVVAELKKLSELKRRYRRKR 69

Query: 145 FDFSPEKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALE 204
              +P+  +++AEIQE +SLLKTYEIM KKLE++++ KDSEI  L+EKLEE    N  LE
Sbjct: 70  QKGAPQDAILAAEIQEQRSLLKTYEIMVKKLEAEVRAKDSEIDSLREKLEELLVANSKLE 129

Query: 205 KR 206
           KR
Sbjct: 130 KR 131

Plant protein of unknown function. Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	487
PF04859	131	DUF641: Plant protein of unknown function (DUF641)	100.0
PF10205	102	KLRAQ: Predicted coiled-coil domain-containing pro	92.72
PRK09039	343	hypothetical protein; Validated	92.33
PF08317	325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	90.52
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	86.6
COG0497	557	RecN ATPase involved in DNA repair [DNA replicatio	85.94
PF11559	151	ADIP: Afadin- and alpha -actinin-Binding; InterPro	84.47
PRK11448	1123	hsdR type I restriction enzyme EcoKI subunit R; Pr	83.15
KOG2264	907	consensus Exostosin EXT1L [Signal transduction mec	83.04
PRK10869	553	recombination and repair protein; Provisional	81.72
PF08614	194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	81.22
PF06785	401	UPF0242: Uncharacterised protein family (UPF0242);	80.41

>PF04859 DUF641: Plant protein of unknown function (DUF641); InterPro: IPR006943 This conserved region is found in a number of plant proteins of unknown function

Probab=100.00  E-value=2.7e-47  Score=342.83  Aligned_cols=130  Identities=58%  Similarity=0.776  Sum_probs=127.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCCchhHhHhHHHHHHHHHhhHHHHHHHhhcCCCCCchhhhHHHH
Q 038418           78 TELEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAE  157 (487)
Q Consensus        78 ~~~~~~~~~eali~~lFa~VSslKaAY~qLQ~Ah~PyDpdkI~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~ae  157 (487)
                      +++++..++|++|++|||+||+||+||+|||+||+|||||+|++||++||+||++||+||++|++++.+++|+.+++.++
T Consensus         2 ~~~~~~~~~eali~~lFa~VSalKaAY~qLQ~Ah~PyDpd~I~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~a~   81 (131)
T PF04859_consen    2 EEAQRAAAMEALIAKLFATVSALKAAYAQLQQAHSPYDPDKIQAADEAVVSELRRLSELKRRYRKKQSDPSPQVARLAAE   81 (131)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccccc
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHhhhh
Q 038418          158 IQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRM  207 (487)
Q Consensus       158 i~e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~~n~~Lekrl  207 (487)
                      |+|||++|+|||++++|||+|+++||+||..||++|+++.+.|++|||||
T Consensus        82 ~~e~qsli~~yE~~~~kLe~e~~~Kdsei~~Lr~~L~~~~~~n~~Lekrl  131 (131)
T PF04859_consen   82 IQEQQSLIKTYEIVVKKLEAELRAKDSEIDRLREKLDELNRANKSLEKRL  131 (131)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999996

>PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif

Probab=92.72  E-value=0.6  Score=41.50  Aligned_cols=57  Identities=25%  Similarity=0.278  Sum_probs=52.0

Q ss_pred             hhHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHhhhhh
Q 038418          152 TMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMN  208 (487)
Q Consensus       152 ~~l~aei~e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~~n~~Lekrl~  208 (487)
                      +-|.|+...++..+-++..-..+|..+++.||..|-.+.++++.+.-+|..|+||+.
T Consensus         8 sKLraQ~~vLKKaVieEQ~k~~~L~e~Lk~ke~~LRk~eqE~dSL~FrN~QL~kRV~   64 (102)
T PF10205_consen    8 SKLRAQNQVLKKAVIEEQAKNAELKEQLKEKEQALRKLEQENDSLTFRNQQLTKRVE   64 (102)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            347788888988888999999999999999999999999999999999999999953

This domain is found in a family of coiled-coil domain-containing proteins that are conserved from nematodes to humans. These proteins also contain a C-terminal TTKRSYEDQ motif domain (IPR019348 from INTERPRO). The function of these proteins is not known.

>PRK09039 hypothetical protein; Validated

Probab=92.33  E-value=4.1  Score=42.77  Aligned_cols=109  Identities=21%  Similarity=0.174  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCCchhHh--HhHHHHHHHHH-hhHHHHHHHhhcCCCCCchhhhHHHHHH
Q 038418           83 RISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQ--SADQLVVSELK-LLSELKQCYLKKQFDFSPEKTMVSAEIQ  159 (487)
Q Consensus        83 ~~~~eali~~lFa~VSslKaAY~qLQ~Ah~PyDpdkI~--aAD~~vVsEL~-~Ls~LK~~y~~~~~~~~~~~~~l~aei~  159 (487)
                      ...++.-|+.|=+..++.++-=..|+.+.-    .+..  ..++.-.++|+ .|+++|..|-..    .|+...|.++|.
T Consensus        76 ~~~l~~~l~~l~~~l~~a~~~r~~Le~~~~----~~~~~~~~~~~~~~~l~~~L~~~k~~~se~----~~~V~~L~~qI~  147 (343)
T PRK09039         76 NQDLQDSVANLRASLSAAEAERSRLQALLA----ELAGAGAAAEGRAGELAQELDSEKQVSARA----LAQVELLNQQIA  147 (343)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhcchHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHH
Confidence            344445555555555544443333333211    1111  12223333343 788888877764    567788899999


Q ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 038418          160 ELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQ  199 (487)
Q Consensus       160 e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~~  199 (487)
                      .++.-+..-+..+..+|.+.+..+..|..|+++|+.+...
T Consensus       148 aLr~Qla~le~~L~~ae~~~~~~~~~i~~L~~~L~~a~~~  187 (343)
T PRK09039        148 ALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVALAQ  187 (343)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9988888888888888888888888888888888766543

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []

Probab=90.52  E-value=11  Score=39.06  Aligned_cols=120  Identities=18%  Similarity=0.189  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCCchhHhHhHHHHHHHHHhhHHHHHHHhh-c----CCCCCc--hhhhHHH
Q 038418           84 ISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLK-K----QFDFSP--EKTMVSA  156 (487)
Q Consensus        84 ~~~eali~~lFa~VSslKaAY~qLQ~Ah~PyDpdkI~aAD~~vVsEL~~Ls~LK~~y~~-~----~~~~~~--~~~~l~a  156 (487)
                      ...+.+...|-..+..|+.-|..|..        .+...|.++-.=..+.+.|+..... +    +.....  ....+.+
T Consensus       145 ~ll~gl~~~L~~~~~~L~~D~~~L~~--------~~~~l~~~~~~l~~~~~~L~~e~~~Lk~~~~e~~~~D~~eL~~lr~  216 (325)
T PF08317_consen  145 QLLEGLKEGLEENLELLQEDYAKLDK--------QLEQLDELLPKLRERKAELEEELENLKQLVEEIESCDQEELEALRQ  216 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCHHHHHHHHH
Confidence            34455777777777778777777763        3444443333211233333333321 0    111111  1244556


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHhhhhhccC
Q 038418          157 EIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMNQSG  211 (487)
Q Consensus       157 ei~e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~~n~~Lekrl~~s~  211 (487)
                      ++.++..-+......+..|+.++...+.+|..+.++..++...-..+++.+..+.
T Consensus       217 eL~~~~~~i~~~k~~l~el~~el~~l~~~i~~~~~~k~~l~~eI~e~~~~~~~~r  271 (325)
T PF08317_consen  217 ELAEQKEEIEAKKKELAELQEELEELEEKIEELEEQKQELLAEIAEAEKIREECR  271 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            6666666776667777788888888888888888888888877777777665443

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=86.60  E-value=0.7  Score=42.61  Aligned_cols=52  Identities=23%  Similarity=0.347  Sum_probs=34.5

Q ss_pred             CceEEEecCCCcccccccccchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCeEEEEecCCeeeCCeEEE-eEE
Q 038418          406 EASIFQVNKGSRFSEVYMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQ-CQV  478 (487)
Q Consensus       406 ~a~IF~V~rG~~Fs~vYMEsV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VgftV~PGF~vg~tVik-crV  478 (487)
                      ++..+.+. |..|||.+||-|......                    +..+..|.=.+.|||++|++||+ ++|
T Consensus       109 Gv~~i~~~-G~~FDp~~heav~~~~~~--------------------~~~~~~I~~v~~~GY~~~~rvlRpA~V  161 (165)
T PF01025_consen  109 GVEEIEPV-GEPFDPNLHEAVETVPDP--------------------DKEPGTIVEVVRPGYRLGGRVLRPAEV  161 (165)
T ss_dssp             TEEEE--T-SSB--TTTEEEEEEECSS--------------------SS-CTBEEEECC-EEEETTEEEE-EEE
T ss_pred             CCEecCCC-CCCCCHHHheeheecCcC--------------------CCCcCeEEEEEecCEEECCEEeeeeEE
Confidence            56677777 999999999998754321                    12456788899999999999887 344

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]

Probab=85.94  E-value=9.4  Score=42.95  Aligned_cols=90  Identities=20%  Similarity=0.194  Sum_probs=47.2

Q ss_pred             HHhhHHHHHHHHHhh---------cCCCCchhHhHhHHHHHHHHHhhHHHHHHHhhcCCCCCchhhhHHHHHHHHHHhhh
Q 038418           96 SISTVKSSYVQLQHA---------QSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLLK  166 (487)
Q Consensus        96 ~VSslKaAY~qLQ~A---------h~PyDpdkI~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~aei~e~q~ll~  166 (487)
                      .+..+-.||.+|+.|         .++|||+.+...    -+=|..|..|+|.|....-+.    -....++++.-..|.
T Consensus       267 ~~~~l~ea~~~l~ea~~el~~~~~~le~Dp~~L~~v----e~Rl~~L~~l~RKY~~~~~~l----~~~~~~~~~el~~L~  338 (557)
T COG0497         267 LAELLEEALYELEEASEELRAYLDELEFDPNRLEEV----EERLFALKSLARKYGVTIEDL----LEYLDKIKEELAQLD  338 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH----HHHHHHHHHHHHHhCCCHHHH----HHHHHHHHHHHHHhh
Confidence            344556688888876         469999887653    334556666676666432222    223344444444444


Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 038418          167 TYEIMGKKLESQLKLKDSEIIFLKEKL  193 (487)
Q Consensus       167 tye~~~~kLe~e~~~KDsei~~Lk~kL  193 (487)
                      ..+.-.+.||.++..=-.+...+-++|
T Consensus       339 ~~~~~~~~Le~~~~~l~~~~~~~A~~L  365 (557)
T COG0497         339 NSEESLEALEKEVKKLKAELLEAAEAL  365 (557)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444555554444333333333333

>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch

Probab=84.47  E-value=33  Score=31.45  Aligned_cols=100  Identities=22%  Similarity=0.287  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCCchhHhHhHHHHHHHHHhhHHHHHHHhhcCCCCCchhhhHHHHHH
Q 038418           80 LEYRISLEAFLAKLFASISTVKSSYVQLQHAQSPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQ  159 (487)
Q Consensus        80 ~~~~~~~eali~~lFa~VSslKaAY~qLQ~Ah~PyDpdkI~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~aei~  159 (487)
                      ......+..-+.++=..+..++..+-.|+        +++..+..-+.+-..+...|+..+..       ....+..+-+
T Consensus        51 ~~~~e~l~~~~~~l~~d~~~l~~~~~rL~--------~~~~~~ere~~~~~~~~~~l~~~~~~-------~~~~~k~~ke  115 (151)
T PF11559_consen   51 MEQREDLSDKLRRLRSDIERLQNDVERLK--------EQLEELERELASAEEKERQLQKQLKS-------LEAKLKQEKE  115 (151)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHH
Confidence            33444444455555556666666666664        55666666555555555555544443       1223444455


Q ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 038418          160 ELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLE  194 (487)
Q Consensus       160 e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~  194 (487)
                      |.+.+-..........+-|++.||-||..||++|.
T Consensus       116 e~~klk~~~~~~~tq~~~e~rkke~E~~kLk~rL~  150 (151)
T PF11559_consen  116 ELQKLKNQLQQRKTQYEHELRKKEREIEKLKERLN  150 (151)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            55555555566666788899999999999999885

pombe and other fungi where it anchors spindle-pole bodies to spindle microtubules []. It is a coiled-coil structure, and in pombe, it is required for anchoring the minus end of spindle microtubules to the centrosome equivalent, the spindle-pole body. The name ADIP derives from the family being composed of Afadin- and alpha -Actinin-Binding Proteins Localised at Cell-Cell Adherens Junctions.

>PRK11448 hsdR type I restriction enzyme EcoKI subunit R; Provisional

Probab=83.15  E-value=14  Score=44.68  Aligned_cols=102  Identities=19%  Similarity=0.142  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHhhHHHHHHH-HHhhcCCCCchhHhHh-HHHHHHHHHhhHHHHHHHhhcCCCCCchhhhHHHHHHHHHHhh
Q 038418           88 AFLAKLFASISTVKSSYVQ-LQHAQSPYDADGIQSA-DQLVVSELKLLSELKQCYLKKQFDFSPEKTMVSAEIQELKSLL  165 (487)
Q Consensus        88 ali~~lFa~VSslKaAY~q-LQ~Ah~PyDpdkI~aA-D~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~aei~e~q~ll  165 (487)
                      ..+..+|.-..=+-..|.. -...--||||..+..+ ......||.   .|++.....    .-......+.++.....+
T Consensus       107 ~~Lk~lf~l~~Wf~~~Y~~~~~~~~~~F~~p~~p~~~~~~~~~~~~---~l~~~~~~~----~~~~~~~~~~~~~~~~~~  179 (1123)
T PRK11448        107 MGLKLAFRLAVWFHRTYGKDWDFKPGPFVPPEDPENLLHALQQEVL---TLKQQLELQ----AREKAQSQALAEAQQQEL  179 (1123)
T ss_pred             HHHHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCcchhhhhHHHHH---HHHHHHHHh----hhhhhhhhhhHHHHHHHH
Confidence            5567788776666666655 2233457998877533 333445555   444443210    001122333444444455


Q ss_pred             hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 038418          166 KTYEIMGKKLESQLKLKDSEIIFLKEKLEES  196 (487)
Q Consensus       166 ~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~  196 (487)
                      +..+.+.++++++..+-+.++..|+++..+.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (1123)
T PRK11448        180 VALEGLAAELEEKQQELEAQLEQLQEKAAET  210 (1123)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5555666666666666666666666655543

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]

Probab=83.04  E-value=7.3  Score=44.01  Aligned_cols=59  Identities=25%  Similarity=0.283  Sum_probs=51.8

Q ss_pred             hhhhHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHhhhhh
Q 038418          150 EKTMVSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMN  208 (487)
Q Consensus       150 ~~~~l~aei~e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~~n~~Lekrl~  208 (487)
                      ..+.++++-||++|-+..|-..+++|+..+-+|..|+..||..+++++.+-+.|-.+-+
T Consensus        94 EL~ele~krqel~seI~~~n~kiEelk~~i~~~q~eL~~Lk~~ieqaq~~~~El~~~n~  152 (907)
T KOG2264|consen   94 ELTELEVKRQELNSEIEEINTKIEELKRLIPQKQLELSALKGEIEQAQRQLEELRETNN  152 (907)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence            45668899999999999999999999999999999999999999999887777655533

>PRK10869 recombination and repair protein; Provisional

Probab=81.72  E-value=18  Score=40.34  Aligned_cols=130  Identities=13%  Similarity=0.200  Sum_probs=67.6

Q ss_pred             HHHHHHHHHhhcCCCCchhHhHhHH--HHHHHHHhhHHHHHHHhhcCCCCCch-hhhHHHHHHHHHHhhhHHHHHHHHHH
Q 038418          100 VKSSYVQLQHAQSPYDADGIQSADQ--LVVSELKLLSELKQCYLKKQFDFSPE-KTMVSAEIQELKSLLKTYEIMGKKLE  176 (487)
Q Consensus       100 lKaAY~qLQ~Ah~PyDpdkI~aAD~--~vVsEL~~Ls~LK~~y~~~~~~~~~~-~~~l~aei~e~q~ll~tye~~~~kLe  176 (487)
                      +..+.-+|+.. .=|||+-=..++.  -+..+|+.++.-=+.|.. ..+..|. ...++.++..++.|-|-|...+..+-
T Consensus       246 l~~~~~~l~~~-~~~d~~~~~~~~~l~~~~~~l~~~~~~l~~~~~-~~~~dp~~l~~ie~Rl~~l~~L~rKyg~~~~~~~  323 (553)
T PRK10869        246 LYSAKQLLSEL-IGMDSKLSGVLDMLEEALIQIQEASDELRHYLD-RLDLDPNRLAELEQRLSKQISLARKHHVSPEELP  323 (553)
T ss_pred             HHHHHHHHHHH-hhhCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence            44555566655 5677653222222  233455555544445554 2344444 35677778888888888864443332


Q ss_pred             H-------HH---hhhhHHHHHHHHHHHHHHHhhHhHhhhhhccCCCcCCcccccCCCChhHHHHHHHHHHHHHHHHHHH
Q 038418          177 S-------QL---KLKDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRL  246 (487)
Q Consensus       177 ~-------e~---~~KDsei~~Lk~kL~e~~~~n~~Lekrl~~s~~ls~~d~l~~s~lsp~~F~~~l~~A~~Sir~F~Kl  246 (487)
                      .       ++   ...+..+..|+++++++...-..+-++|..                         .=.++...|.+.
T Consensus       324 ~~~~~l~~eL~~L~~~e~~l~~Le~e~~~l~~~l~~~A~~LS~-------------------------~R~~aA~~l~~~  378 (553)
T PRK10869        324 QHHQQLLEEQQQLDDQEDDLETLALAVEKHHQQALETAQKLHQ-------------------------SRQRYAKELAQL  378 (553)
T ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHH
Confidence            2       22   223334444444444443333222222221                         123677889999


Q ss_pred             HHHHHHhcCC
Q 038418          247 MIDELKSAGW  256 (487)
Q Consensus       247 Li~~Mk~agw  256 (487)
                      +..+|+.-|-
T Consensus       379 v~~~L~~L~m  388 (553)
T PRK10869        379 ITESMHELSM  388 (553)
T ss_pred             HHHHHHHcCC
Confidence            9999887554

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells

Probab=81.22  E-value=3  Score=40.01  Aligned_cols=114  Identities=27%  Similarity=0.292  Sum_probs=25.2

Q ss_pred             HHHHHHHhhHHHHHHHHHhh-------c-------CCCCchhHhHhHHHHHHHHHhhHHHHHHHhhcCCCCC-------c
Q 038418           91 AKLFASISTVKSSYVQLQHA-------Q-------SPYDADGIQSADQLVVSELKLLSELKQCYLKKQFDFS-------P  149 (487)
Q Consensus        91 ~~lFa~VSslKaAY~qLQ~A-------h-------~PyDpdkI~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~-------~  149 (487)
                      .+|++.++.++..=..||..       |       .|-.+..|..-+..+..--..|+++   |+.+ ....       .
T Consensus        27 ~~L~d~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~l~~ELael---~r~~-~el~~~L~~~~~  102 (194)
T PF08614_consen   27 NRLADRTSLLKAENEQLQPEAESLPSSSSSSPSESGSVSSAQISSLEQKLAKLQEELAEL---YRSK-GELAQQLVELND  102 (194)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccc-cccccccccccc
Confidence            67888899999888888862       1       2223333444444444333344444   3432 1111       1


Q ss_pred             hhhhHHHHHH-------HHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHhhhhh
Q 038418          150 EKTMVSAEIQ-------ELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMN  208 (487)
Q Consensus       150 ~~~~l~aei~-------e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~~n~~Lekrl~  208 (487)
                      ....+.+++.       +++..+...+..++.|+.+++.|+.-+..|+.++..++-.+..+|+|+.
T Consensus       103 ~l~~l~~~~~~~~~~l~~l~~~~~~L~~~~~~l~~~l~ek~k~~e~l~DE~~~L~l~~~~~e~k~~  168 (194)
T PF08614_consen  103 ELQELEKELSEKERRLAELEAELAQLEEKIKDLEEELKEKNKANEILQDELQALQLQLNMLEEKLR  168 (194)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1122333333       3333333344444455555555555555555555555555566666543

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. This entry represents auotphagy protein 16 (Apg16), which is required for the function of the Apg12p-Apg5p conjugate.; PDB: 3A7O_D 3A7P_B.

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function

Probab=80.41  E-value=20  Score=38.17  Aligned_cols=167  Identities=18%  Similarity=0.266  Sum_probs=90.5

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHhhhhhccCCCcCCcccccCCCChhHHHHHHH
Q 038418          155 SAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNKQNKALEKRMNQSGQLVMPDNVHLSGLSPSHFNTVLR  234 (487)
Q Consensus       155 ~aei~e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~~n~~Lekrl~~s~~ls~~d~l~~s~lsp~~F~~~l~  234 (487)
                      ...+.-+|.|...|.++...=-.=++.|...|..|+.|.+++.-.-+.|    .+-. .++-+++  + -+|+       
T Consensus       172 aE~layqq~L~~eyQatf~eq~~ml~kRQ~yI~~LEsKVqDLm~EirnL----LQle-~~~~e~~--p-~~~~-------  236 (401)
T PF06785_consen  172 AEALAYQQELNDEYQATFVEQHSMLDKRQAYIGKLESKVQDLMYEIRNL----LQLE-SDMKESM--P-STPS-------  236 (401)
T ss_pred             HHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH----HHhh-hhhhhcC--C-CCCc-------
Confidence            3345556667777777776666667788888888888888854433222    1100 0111111  1 1121       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCC--CHHHHhhhcCCCc-ccccCCcchHHHHHHHHHHHhccCCCCCCCCCCcchhhhhhH
Q 038418          235 HTVKSIRSFVRLMIDELKSAGW--DIDAAANSIQPNV-VYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQHQQQQQQQ  311 (487)
Q Consensus       235 ~A~~Sir~F~KlLi~~Mk~agw--Dl~aaa~si~p~v-~y~k~~h~kfalEA~v~r~MF~gFe~~~F~~~~~s~~~~~d~  311 (487)
                         .+.+.-.+-|.++++..-.  .-..+|+++...- ....++-.-|++|   ||.+|++-.+++-++=-     ..-|
T Consensus       237 ---~~s~~v~~ql~selkkivf~~enie~A~slTasry~~~e~svhnysLd---cRrLfDsLreEnlgmlf-----VYs~  305 (401)
T PF06785_consen  237 ---PSSQDVPKQLVSELKKIVFKVENIEAASSLTASRYINSESSVHNYSLD---CRRLFDSLREENLGMLF-----VYSP  305 (401)
T ss_pred             ---chhhhhHHHHHHHHHHHHHHHhhHHHHHHhhHHhhhccCCccccchHH---HHHHHhhhcccccceEE-----Eecc
Confidence               1223333444455543211  1223444443221 1222333457555   99999999998855421     2333


Q ss_pred             HHHHHHHH--HHhhhcCCCCHHHHHhcCCC---ChHHHHHHH
Q 038418          312 QQRQQLFF--QRFNELKPVKAKEFLSRKPK---SSFAKFCRA  348 (487)
Q Consensus       312 ~~~r~~~F--~~F~~lk~~~p~e~L~~~p~---s~FskFC~~  348 (487)
                      +.+| .-|  ++|..+-+-...++|...++   +++..+=+.
T Consensus       306 k~qR-llFAN~~fk~wtGy~~edFl~~~~dIV~eGl~qW~~d  346 (401)
T PF06785_consen  306 KSQR-LLFANSQFKTWTGYSSEDFLKDFSDIVQEGLAQWETD  346 (401)
T ss_pred             hhhH-HHHhHHHHHHHhccCHHHHHhcchHHHHhhHHHHHHH
Confidence            3333 444  46777778888888888876   677777555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	487
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.3 bits (140), Expect = 3e-09
 Identities = 51/381 (13%), Positives = 99/381 (25%), Gaps = 112/381 (29%)

Query: 133 LSELKQCY----------LKKQFDF-----SPEKTMVSAEIQEL----KSLLKTYEIMGK 173
             E +  Y              FD       P+  +   EI  +     ++  T  +   
Sbjct: 11  TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT 70

Query: 174 KLESQLKLKDSEII-------------FLKEKLEESNKQNKALEK-------RMNQSGQL 213
                L  K  E++             FL   ++   +Q   + +       R+    Q+
Sbjct: 71  -----LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 214 VMPDNVHLSGLSPSHFNTVLRHTVKSIRSFVRLMIDELKSAG--WDIDAAANSIQ----- 266
               NV         +   LR  +  +R    ++ID +  +G  W       S +     
Sbjct: 126 FAKYNVS----RLQPYLK-LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 267 PNVVYYRADHKCFAFESFVCREMFDAFHYPNYSPAKQHQQQQQQQQQRQQLFFQRFNELK 326
              +++     C + E+ +  EM     Y       Q       +         R + ++
Sbjct: 181 DFKIFWLNLKNCNSPETVL--EMLQKLLY-------QIDPNWTSRSDHSSNIKLRIHSIQ 231

Query: 327 PVKAKEFLSRKPKSSFAKFCRAKYCQVIHPKMESAFFGDLSQRNVINSGEFPDSAFFSSF 386
               +  L  KP          + C ++          ++      N       AF    
Sbjct: 232 AEL-RRLLKSKPY---------ENCLLV--------LLNVQNAKAWN-------AF---- 262

Query: 387 ADMAKRVWLLHC--LAFSFDPEASIFQVNKGSRFSEVYMESVAEEAFLSSSENPQESSSL 444
            +       L C  L  +      +      +  + + ++             P E  SL
Sbjct: 263 -N-------LSCKILLTTRF--KQVTDFLSAATTTHISLDHH-SMTL-----TPDEVKSL 306

Query: 445 SPSLSSSSDSAEPRVAFTIVP 465
                       PR   T  P
Sbjct: 307 LLKYLDCRPQDLPREVLTTNP 327

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	487
3nmd_A	72	CGMP dependent protein kinase; leucine zipper, coi	94.87
1zxa_A	67	CGMP-dependent protein kinase 1, alpha isozyme; pa	94.71
1t6f_A	37	Geminin; coiled-coil, cell cycle; 1.47A {Synthetic	82.37

>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}

Probab=94.87  E-value=0.038  Score=45.02  Aligned_cols=33  Identities=27%  Similarity=0.403  Sum_probs=27.3

Q ss_pred             hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 038418          165 LKTYEIMGKKLESQLKLKDSEIIFLKEKLEESN  197 (487)
Q Consensus       165 l~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~  197 (487)
                      |+..+..++.||.++..||++|..|+.+|+...
T Consensus        35 Lr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfr   67 (72)
T 3nmd_A           35 LRQRDALIDELELELDQKDELIQMLQNELDKYR   67 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            356677789999999999999999999997653

>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}

Probab=94.71  E-value=0.032  Score=44.82  Aligned_cols=45  Identities=31%  Similarity=0.295  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 038418          154 VSAEIQELKSLLKTYEIMGKKLESQLKLKDSEIIFLKEKLEESNK  198 (487)
Q Consensus       154 l~aei~e~q~ll~tye~~~~kLe~e~~~KDsei~~Lk~kL~e~~~  198 (487)
                      +....++++..++..+..+..||.+++.||.||..||.+|+...+
T Consensus         9 ~~~~~e~~~~~i~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs   53 (67)
T 1zxa_A            9 TSELEEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQS   53 (67)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             chHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            556678889999999999999999999999999999999987755

>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1

Probab=82.37  E-value=1.5  Score=31.23  Aligned_cols=25  Identities=36%  Similarity=0.460  Sum_probs=21.9

Q ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHH
Q 038418          173 KKLESQLKLKDSEIIFLKEKLEESN  197 (487)
Q Consensus       173 ~kLe~e~~~KDsei~~Lk~kL~e~~  197 (487)
                      +||..++.+||.||..||++=.++.
T Consensus        10 ekLhk~ie~KdeeIa~Lk~eN~eL~   34 (37)
T 1t6f_A           10 EKLHKEIEQKDNEIARLKKENKELA   34 (37)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            6889999999999999999876653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	487
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	86.7

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=86.70  E-value=0.25  Score=36.63  Aligned_cols=50  Identities=12%  Similarity=0.113  Sum_probs=36.5

Q ss_pred             cCCCcccccccccchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCeEEEEecCCeeeCCeEEE-eEEEecc
Q 038418          413 NKGSRFSEVYMESVAEEAFLSSSENPQESSSLSPSLSSSSDSAEPRVAFTIVPGFRIGKTVLQ-CQVYLSP  482 (487)
Q Consensus       413 ~rG~~Fs~vYMEsV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VgftV~PGF~vg~tVik-crVYls~  482 (487)
                      ..|..|||.+||-+......                    +..+-.|.=.+-+|++++++||+ ++|-++.
T Consensus         6 ~~g~~FDP~~HeAv~~~~~~--------------------~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k   56 (59)
T d1dkga1           6 ETNVPLDPNVHQAIAMVESD--------------------DVAPGNVLGIMQKGYTLNGRTIRAAMVTVAK   56 (59)
T ss_dssp             CCSSBCCTTSEEEEEEEECS--------------------SSCTTBEEEEEECEEEETTEEEECEEEEEEE
T ss_pred             CCCCCCCHHHceEeeEecCC--------------------CCCCCEEEEEEeCCcEECCEEeeccEEEEec
Confidence            35899999999998753321                    11334677899999999999987 5666553