Citrus Sinensis ID: 038443

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
Protein Sequence
RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYDASSAPSPAARSAVLFPSL
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHcHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHcccccccHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHHHHEHccccccccHHHHHHHHHccccHHHHHHHccccHHHHHHHcccccccccccccccccEEcccc
Coil and Loop (DISEMBL)
rlevsgglTECWNTLMELKSCSNENVILFLNsqadigpdycRAIDIitrncwpamLTSLEFTAKEGNILrgyydassapspaarsavlfpsl
Flexible Loop (DISEMBL)
rlevsggltECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYDassapspaarsavlfpsl
Low Complexity Region (SEG)
RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYDassapspaarsaVLFPSL
Disordered region (IsUnstruct)
******GLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYD******************
Disordered Region (DISOPRED)
*****GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYD**************FP**
Disordered Region (DISEMBL)
RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYDA*********SAVLFPSL
Disordered Region (DISPRO)
*****GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYDAS****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYDASSAPSPAARSAVLFPSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	92	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.869	0.629	0.586	3e-22
Q9SJ24	125	Egg cell-secreted protein	no	no	0.728	0.536	0.611	3e-20
Q9SJ23	125	Egg cell-secreted protein	no	no	0.836	0.616	0.544	3e-19
Q9SRD8	158	Egg cell-secreted protein	no	no	0.847	0.493	0.448	1e-15
Q9FGG1	155	Egg cell-secreted protein	no	no	0.934	0.554	0.383	6e-12

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 7/87 (8%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RL+ SGGL ECWN L ELKSC+NE V+ FLN +  +G   C ++DIIT NCWPAMLTSL 
Sbjct: 39  RLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLG 97

Query: 61  FTAKEGNILRGYY------DASSAPSP 81
           FT +E N+LRG+       D+S APSP
Sbjct: 98  FTPEEANVLRGFCQNPNSGDSSPAPSP 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query: 6   GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKE 65
           GGL ECWN L ELKSC+NE V+ FLN +  +G D C+A+++IT +CWPAMLTSL FT+ E
Sbjct: 41  GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDE 100

Query: 66  GNILRGY 72
            N+LRG+
Sbjct: 101 TNVLRGF 107

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 2/79 (2%)

Query: 6   GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKE 65
           GGL +CW+ L ELKSC+NE V+ FLN +  +G   C A+D+IT +CWPAMLTSL FT +E
Sbjct: 41  GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEE 100

Query: 66  GNILRGYYDA--SSAPSPA 82
            N+LRG+  +  S   SPA
Sbjct: 101 TNVLRGFCQSPNSGGSSPA 119

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 51/78 (65%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RL++      CW++LM+L+ CS E ++ FLN +  IGP  C AI  I R CWP M+  L 
Sbjct: 47  RLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLG 106

Query: 61  FTAKEGNILRGYYDASSA 78
           FTA+EG++L+GY D + +
Sbjct: 107 FTAQEGDMLQGYCDGNDS 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 13/99 (13%)

Query: 5   SGGLTECWNTLMELKSCSNENVILFLNS--------QADIGPDYCRAIDIITRNCWPAML 56
           +G L +CWN  +ELKSC++E V  FL+         +  I  D C AI ++ ++CW  M 
Sbjct: 47  AGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMF 106

Query: 57  TSLEFTAKEGNILRGYYDASS-----APSPAARSAVLFP 90
           TSL  T  EGN LR Y +  +     +PSPA  +  L P
Sbjct: 107 TSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLALSP 145

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
296082551	135	unnamed protein product [Vitis vinifera]	0.815	0.555	0.786	4e-28
359482498	128	PREDICTED: uncharacterized protein LOC10	0.902	0.648	0.666	3e-26
224060465	146	predicted protein [Populus trichocarpa]	0.934	0.589	0.618	2e-25
255578404	136	conserved hypothetical protein [Ricinus	0.847	0.573	0.615	4e-22
116830619	128	unknown [Arabidopsis thaliana]	0.869	0.625	0.586	1e-20
15235039	127	uncharacterized protein [Arabidopsis tha	0.869	0.629	0.586	1e-20
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.771	0.559	0.638	9e-20
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.836	0.616	0.542	6e-19
255578398	135	conserved hypothetical protein [Ricinus	0.728	0.496	0.652	7e-19
15227092	125	uncharacterized protein [Arabidopsis tha	0.728	0.536	0.611	1e-18

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/75 (78%), Positives = 64/75 (85%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RLE SGGL ECWN L+ELKSC+NE ++ FLN QADIGPD C AIDIITRNCWP MLTSL 
Sbjct: 40  RLETSGGLVECWNALVELKSCTNEIILFFLNGQADIGPDCCGAIDIITRNCWPTMLTSLG 99

Query: 61  FTAKEGNILRGYYDA 75
           FTA+EGNILRGY DA
Sbjct: 100 FTAEEGNILRGYCDA 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/84 (66%), Positives = 69/84 (82%), Gaps = 1/84 (1%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RLE SGGL ECWN LME++ C+NE ++ FLN Q  +GP+ C+AI IITRNCWPAMLTSL 
Sbjct: 36  RLETSGGLVECWNALMEIRQCTNEIILFFLNGQTVLGPECCQAISIITRNCWPAMLTSLG 95

Query: 61  FTAKEGNILRGYYDASSA-PSPAA 83
           FTA+EGNIL+GY +ASS  P+PA+
Sbjct: 96  FTAEEGNILQGYCNASSGPPTPAS 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 66/97 (68%), Gaps = 11/97 (11%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RLE  G L ECWN L+E+KSC+NE V+ F+  QADIGPD CRAI  IT NCWPAM TSL 
Sbjct: 41  RLEDEGSLVECWNALVEIKSCTNEIVLFFMTGQADIGPDCCRAIHTITHNCWPAMFTSLG 100

Query: 61  FTAKEGNILRGYYDAS-----------SAPSPAARSA 86
           FT +EGNILRGY DAS           SAPSP A  A
Sbjct: 101 FTDEEGNILRGYCDASPNSPSIYFSPASAPSPLAAGA 137

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 59/78 (75%)

Query: 5   SGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAK 64
           S  L +CWN L+E+KSCSNE ++ FLN   DIG D CR+I I T NCWPAMLTS+ FTA+
Sbjct: 42  SSSLVDCWNALIEIKSCSNEIILFFLNGHTDIGADCCRSIAIFTHNCWPAMLTSIGFTAE 101

Query: 65  EGNILRGYYDASSAPSPA 82
           EGNILRGY D +S+ S +
Sbjct: 102 EGNILRGYCDNASSSSTS 119

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 7/87 (8%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RL+ SGGL ECWN L ELKSC+NE V+ FLN +  +G   C ++DIIT NCWPAMLTSL 
Sbjct: 39  RLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLG 97

Query: 61  FTAKEGNILRGYY------DASSAPSP 81
           FT +E N+LRG+       D+S APSP
Sbjct: 98  FTPEEANVLRGFCQNPNSGDSSPAPSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 7/87 (8%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RL+ SGGL ECWN L ELKSC+NE V+ FLN +  +G   C ++DIIT NCWPAMLTSL 
Sbjct: 39  RLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLG 97

Query: 61  FTAKEGNILRGYY------DASSAPSP 81
           FT +E N+LRG+       D+S APSP
Sbjct: 98  FTPEEANVLRGFCQNPNSGDSSPAPSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score =  100 bits (250), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 1/72 (1%)

Query: 1   RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
           RL+ SGGL ECWN L ELKSC+NE V+ FLN +  +G   C A+DIIT NCWPAMLTSL 
Sbjct: 39  RLQ-SGGLMECWNVLYELKSCTNEIVLFFLNGETKLGVSCCEAVDIITTNCWPAMLTSLG 97

Query: 61  FTAKEGNILRGY 72
           FT +E N+LRG+
Sbjct: 98  FTPEEANVLRGF 109

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 6/83 (7%)

Query: 6   GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKE 65
           GGL +CW+ L ELKSC+NE V+ FLN +  +G   C A+D+IT +CWPAMLTSL FT++E
Sbjct: 41  GGLMQCWDALYELKSCTNEIVLFFLNGETKLGSGCCNAVDVITTDCWPAMLTSLGFTSEE 100

Query: 66  GNILRGYYD------ASSAPSPA 82
            N+LRG+        +S APSPA
Sbjct: 101 TNVLRGFCQSPTSGGSSPAPSPA 123

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578398|ref|XP_002530064.1| conserved hypothetical protein [Ricinus communis] gi|223530417|gb|EEF32304.1| conserved hypothetical protein [Ricinus communis]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)

Query: 6   GGLTECWNTLMELKSCSNENVILFLNSQADI--GPDYCRAIDIITRNCWPAMLTSLEFTA 63
           GGL +CWN LME+KSCSNE ++ FLN Q DI  G D C AI II  NCWP+MLTSL FT 
Sbjct: 49  GGLVDCWNALMEIKSCSNEIILFFLNGQTDITIGADCCSAISIIAHNCWPSMLTSLGFTV 108

Query: 64  KEGNILRGY 72
           +E NIL GY
Sbjct: 109 EEVNILNGY 117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227092|ref|NP_179766.1| uncharacterized protein [Arabidopsis thaliana] gi|75206217|sp|Q9SJ24.1|EC12_ARATH RecName: Full=Egg cell-secreted protein 1.2; Flags: Precursor gi|4417269|gb|AAD20394.1| hypothetical protein [Arabidopsis thaliana] gi|91805455|gb|ABE65456.1| hypothetical protein At2g21740 [Arabidopsis thaliana] gi|330252124|gb|AEC07218.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query: 6   GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKE 65
           GGL ECWN L ELKSC+NE V+ FLN +  +G D C+A+++IT +CWPAMLTSL FT+ E
Sbjct: 41  GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDE 100

Query: 66  GNILRGY 72
            N+LRG+
Sbjct: 101 TNVLRGF 107

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.771	0.559	0.625	3e-21
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.728	0.536	0.611	2.1e-20
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.728	0.536	0.582	5.1e-19
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.804	0.468	0.472	3.3e-15
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.739	0.438	0.421	7.4e-11
TAIR|locus:4010713622	120	AT2G14378 [Arabidopsis thalian	0.5	0.383	0.319	0.00093

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 45/72 (62%), Positives = 55/72 (76%)

Query:     1 RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
             RL+ SGGL ECWN L ELKSC+NE V+ FLN +  +G   C ++DIIT NCWPAMLTSL 
Sbjct:    39 RLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLG 97

Query:    61 FTAKEGNILRGY 72
             FT +E N+LRG+
Sbjct:    98 FTPEEANVLRGF 109

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query:     6 GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKE 65
             GGL ECWN L ELKSC+NE V+ FLN +  +G D C+A+++IT +CWPAMLTSL FT+ E
Sbjct:    41 GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDE 100

Query:    66 GNILRGY 72
              N+LRG+
Sbjct:   101 TNVLRGF 107

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 39/67 (58%), Positives = 51/67 (76%)

Query:     6 GGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAKE 65
             GGL +CW+ L ELKSC+NE V+ FLN +  +G   C A+D+IT +CWPAMLTSL FT +E
Sbjct:    41 GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEE 100

Query:    66 GNILRGY 72
              N+LRG+
Sbjct:   101 TNVLRGF 107

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 35/74 (47%), Positives = 49/74 (66%)

Query:     1 RLEVSGGLTECWNTLMELKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLE 60
             RL++      CW++LM+L+ CS E ++ FLN +  IGP  C AI  I R CWP M+  L 
Sbjct:    47 RLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLG 106

Query:    61 FTAKEGNILRGYYD 74
             FTA+EG++L+GY D
Sbjct:   107 FTAQEGDMLQGYCD 120

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 32/76 (42%), Positives = 43/76 (56%)

Query:     5 SGGLTECWNTLMELKSCSNENVILFLNS--------QADIGPDYCRAIDIITRNCWPAML 56
             +G L +CWN  +ELKSC++E V  FL+         +  I  D C AI ++ ++CW  M 
Sbjct:    47 AGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMF 106

Query:    57 TSLEFTAKEGNILRGY 72
             TSL  T  EGN LR Y
Sbjct:   107 TSLGLTTMEGNNLREY 122

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:4010713622 AT2G14378 [Arabidopsis thaliana (taxid:3702)]

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query:    10 ECWNTLMELKSCSNENV-ILFLNSQADIGPDYCRAIDIITRNCWPAM 55
             +CW++L   + C  E +  +F     D+G   C+A   +  NCWP M
Sbjct:    49 KCWSSLFNTQGCVFELLKSVFSGRFGDVGVACCKAFSTVDANCWPHM 95


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        80   0.00091  102 3  11 22  0.40    29
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  110 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.83u 0.12s 7.95t   Elapsed:  00:00:00
  Total cpu time:  7.84u 0.12s 7.96t   Elapsed:  00:00:00
  Start:  Sat May 11 07:44:41 2013   End:  Sat May 11 07:44:41 2013

GO:0005576 "extracellular region" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9T039	EC14_ARATH	No assigned EC number	0.5862	0.8695	0.6299	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019340001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (135 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	92
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	8e-10

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 49.8 bits (119), Expect = 8e-10
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 10 ECWNTLME-LKSCSNENVILFLNSQADIGPDYCRAIDIITRNCWPAMLTSLEFTAK-EGN 67
          +CW+     +  C +E       ++ ++GPD C+AI  I  +CWPA+             
Sbjct: 1  KCWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAILKIGDDCWPALFKMFPSLPFFPPK 60

Query: 68 ILRGY 72
          +L+ Y
Sbjct: 61 LLKNY 65

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	92
PLN00213	118	predicted protein; Provisional	99.96
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.85
PLN00214	115	putative protein; Provisional	84.69

>PLN00213 predicted protein; Provisional

Probab=99.96  E-value=1.1e-30  Score=183.25  Aligned_cols=73  Identities=22%  Similarity=0.504  Sum_probs=67.2

Q ss_pred             CCccchhhhhccCcchHHHHHHHHHhCccc-cChhchHHHHHhhhCcccccccCCCCCcchhhHHhhhcccC-CCCCCCc
Q 038443            6 GGLTECWNTLMELKSCSNENVILFLNSQAD-IGPDYCRAIDIITRNCWPAMLTSLEFTAKEGNILRGYYDAS-SAPSPAA   83 (92)
Q Consensus         6 ~~~~~Cwssl~~v~gC~~EI~~~f~~G~~~-igp~CC~Ai~~i~~~CWP~mf~~~pf~~~e~~~Lkg~C~~~-~~~sPa~   83 (92)
                      .+..||||||++++||+.||++++++||++ ||++|||||++++ +|||+| |++||||+   +||++|+++ .+++|+|
T Consensus        43 pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~~~d-nCwP~~-P~~P~fPp---~LK~~Cs~i~~~~~~~~  117 (118)
T PLN00213         43 PDITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFLDAD-NCIPKI-PFIPFFPP---MLKEQCSRVAGATPPIP  117 (118)
T ss_pred             ccHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHHhhh-ccccCC-cCCCccch---HHHHHHhcccCCCCCCC
Confidence            478999999999999999999999999997 9999999999966 999996 99999998   999999998 5556665

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.85  E-value=5.1e-22  Score=124.38  Aligned_cols=64  Identities=27%  Similarity=0.608  Sum_probs=55.9

Q ss_pred             chhhhhccCcchHHHHHHHHHhCcc-ccChhchHHHHHhhhCcccc---cccCCCCCcc--hhhHHhhhcc
Q 038443           10 ECWNTLMELKSCSNENVILFLNSQA-DIGPDYCRAIDIITRNCWPA---MLTSLEFTAK--EGNILRGYYD   74 (92)
Q Consensus        10 ~Cwssl~~v~gC~~EI~~~f~~G~~-~igp~CC~Ai~~i~~~CWP~---mf~~~pf~~~--e~~~Lkg~C~   74 (92)
                      |||++++++++|++||+.+|++|+. .||++||+||+.++++|||+   ||++.|++++  + ++|+++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~~~r-~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKPLLR-DLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccchhH-HHHHhhcC
Confidence            6999999999999999999999994 59999999999999999999   5555555554  3 49999996

>PLN00214 putative protein; Provisional

Probab=84.69  E-value=0.84  Score=32.40  Aligned_cols=37  Identities=11%  Similarity=0.297  Sum_probs=30.4

Q ss_pred             cchHHHHHHHHH-hCccccChhchHHHHHhhhCc---cccccc
Q 038443           19 KSCSNENVILFL-NSQADIGPDYCRAIDIITRNC---WPAMLT   57 (92)
Q Consensus        19 ~gC~~EI~~~f~-~G~~~igp~CC~Ai~~i~~~C---WP~mf~   57 (92)
                      +-|..||+..++ ||.  +...||+-+...+.+|   |=++|.
T Consensus        45 ~KCa~EI~a~i~~N~t--~s~~CC~~LVk~GK~CH~~LiK~i~   85 (115)
T PLN00214         45 PKCALDIIAVVFENGT--LIDPCCNDLVKEGKVCHDTLIKYIA   85 (115)
T ss_pred             HhhHHHHHHHHHcCCC--CchHHHHHHHHHhhHHHHHHHHHHH
Confidence            459999999999 666  5889999999999999   444444

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00