Citrus Sinensis ID: 038498

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP
Secondary Structure (PSIPRED)
cccccccEEEEEEcccccccccccccHHHHHHHHHHHcccEEEEEEcccHHHHHHHHcccccccccEEEcccccEEEEcccEEEEEcccccccHHHHHHHHHHHHHHHHccccccccccEEEEccccEEEccccccccHHHHHHHHHHccccccHHHHHHHHHHHccccccEEEEcccEEEEEEEccccHHHHHHHHcccccEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEccccccccHccccHHHHHHHHHHHccEEEEEEccccHHHHHHHHcccHHHHccEEEcccccEEEcccccccHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccEEEEEEcccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEccccccccHHHHHHHccccEEEEEccccccccccEEEEcccccccEEcccHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MAARKQGLLALFdvdgtltaprkaatPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVfsenglvahkdgkligtqslksflggekLKEFINFTLHyiadldipikrgtfiefrsgmlnispigrncsqeeRDEFErydkihnirPKMVSVLREKFAHLNLtfsiggqisfdvfpqgwdktyclrylddfneihffgdktykggndheifesertvghtvtspedtmEKCKALFLAKP
Flexible Loop (DISEMBL)
maarkqgllalfdvdgtltaprkAATPQMLEFMRELRKVVTVGvvggsdlskiseQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSgmlnispigrncsqEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESertvghtvtspedtmekckalflakp
Low Complexity Region (SEG)
MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP
Disordered region (IsUnstruct)
*******LLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCS*****EFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIF****************************
Disordered Region (DISOPRED)
****KQG**ALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK*
Disordered Region (DISEMBL)
MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP
Disordered Region (DISPRO)
****KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	248	2.2.26 [Sep-21-2011]
Q1W374	249	Phosphomannomutase OS=Tri	N/A	no	0.991	0.987	0.850	1e-125
Q7XPW5	248	Phosphomannomutase OS=Ory	yes	no	0.995	0.995	0.846	1e-125
Q259G4	248	Phosphomannomutase OS=Ory	N/A	no	0.995	0.995	0.846	1e-125
Q1W376	247	Phosphomannomutase OS=Gly	yes	no	0.987	0.991	0.897	1e-124
Q1W375	252	Phosphomannomutase OS=Nic	N/A	no	0.995	0.980	0.878	1e-122
Q1W377	252	Phosphomannomutase OS=Sol	N/A	no	0.995	0.980	0.870	1e-121
O80840	246	Phosphomannomutase OS=Ara	yes	no	0.991	1.0	0.817	1e-121
Q9UTJ2	257	Phosphomannomutase OS=Sch	yes	no	0.951	0.918	0.630	8e-87
Q54X03	249	Phosphomannomutase 1 OS=D	yes	no	0.951	0.947	0.644	3e-86
Q86B09	249	Phosphomannomutase 2 OS=D	no	no	0.987	0.983	0.588	4e-83

>sp|Q1W374|PMM_WHEAT Phosphomannomutase OS=Triticum aestivum PE=2 SV=1

 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/247 (85%), Positives = 236/247 (95%), Gaps = 1/247 (0%)

Query: 2   AARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           AARK  G+LALFDVDGTLTAPRK  TP+MLEFM+ LR+ VTVGVVGGSDL KISEQLGK+
Sbjct: 3   AARKDAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKS 62

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VI +YDYVFSENGLVAHKDGKLIGTQSLK++LG ++LKEFINFTLHYIADLDIPIKRGTF
Sbjct: 63  VITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTF 122

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGM+N+SPIGRNCSQEERD+FE+YDK+HN+RPKMVSVLREKFAHLNLTFSIGGQIS
Sbjct: 123 IEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQIS 182

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGNDHEIFES+RTVGHTVTSP DT+++C
Sbjct: 183 FDVFPQGWDKTYCLRYLEEFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQC 242

Query: 241 KALFLAK 247
           K++FL++
Sbjct: 243 KSIFLSE 249

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.
Triticum aestivum (taxid: 4565)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 8

>sp|Q7XPW5|PMM_ORYSJ Phosphomannomutase OS=Oryza sativa subsp. japonica GN=PMM PE=2 SV=2

 Score =  448 bits (1153), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/248 (84%), Positives = 236/248 (95%), Gaps = 1/248 (0%)

Query: 1   MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK 59
           MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK
Sbjct: 1   MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGK 60

Query: 60  TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGT 119
           +V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGT
Sbjct: 61  SVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGT 120

Query: 120 FIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQI 179
           FIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQI
Sbjct: 121 FIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQI 180

Query: 180 SFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239
           SFDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGND+EIFES+RT+GHTVTSP+DT E+
Sbjct: 181 SFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQ 240

Query: 240 CKALFLAK 247
           C++LF++K
Sbjct: 241 CRSLFMSK 248

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q259G4|PMM_ORYSI Phosphomannomutase OS=Oryza sativa subsp. indica GN=PMM PE=3 SV=1

 Score =  448 bits (1153), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/248 (84%), Positives = 236/248 (95%), Gaps = 1/248 (0%)

Query: 1   MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK 59
           MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK
Sbjct: 1   MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGK 60

Query: 60  TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGT 119
           +V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGT
Sbjct: 61  SVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGT 120

Query: 120 FIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQI 179
           FIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQI
Sbjct: 121 FIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQI 180

Query: 180 SFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239
           SFDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGND+EIFES+RT+GHTVTSP+DT E+
Sbjct: 181 SFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQ 240

Query: 240 CKALFLAK 247
           C++LF++K
Sbjct: 241 CRSLFMSK 248

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Oryza sativa subsp. indica (taxid: 39946)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q1W376|PMM_SOYBN Phosphomannomutase OS=Glycine max PE=2 SV=1

 Score =  444 bits (1143), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/245 (89%), Positives = 236/245 (96%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAAR+ GL+ALFDVDGTLTAPRK  TP+ML FM+ELRKVVTVGVVGGSDL KISEQLG T
Sbjct: 1   MAARRPGLIALFDVDGTLTAPRKVVTPEMLTFMQELRKVVTVGVVGGSDLIKISEQLGST 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           V ++YDYVFSENGLVAHK+GKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VTNDYDYVFSENGLVAHKEGKLIGTQSLKSFLGEEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYLD FNEIHFFGDKTYKGGNDHEI+ESERTVGHTVTSP+DT+++C
Sbjct: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPDDTVKQC 240

Query: 241 KALFL 245
           K+LFL
Sbjct: 241 KSLFL 245

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Glycine max (taxid: 3847)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q1W375|PMM_TOBAC Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1

 Score =  436 bits (1120), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/247 (87%), Positives = 232/247 (93%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAARK GL+ALFDVDGTLTAPRK  TP+ML+FM+ELRKVVTVGVVGGSDL KISEQLGKT
Sbjct: 1   MAARKPGLIALFDVDGTLTAPRKEVTPEMLKFMKELRKVVTVGVVGGSDLVKISEQLGKT 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           V  +YDY FSENGLVAHKDGKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VTTDYDYCFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGR+CSQEERDEFE+YDK+H IR  MVSVLREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRDCSQEERDEFEKYDKVHKIRQTMVSVLREKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYL++FNEIHFFGDKTYKGGNDHEI+ESERTVGHTVTSPEDT+++C
Sbjct: 181 FDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPEDTVKQC 240

Query: 241 KALFLAK 247
              FL K
Sbjct: 241 SEQFLGK 247

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Nicotiana tabacum (taxid: 4097)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q1W377|PMM_SOLLC Phosphomannomutase OS=Solanum lycopersicum PE=2 SV=1

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/247 (87%), Positives = 231/247 (93%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAARK GL+ALFDVDGTLTAPRK +TPQML+FM+ELRKVVTVGVVGGSDL KISEQLG T
Sbjct: 1   MAARKAGLIALFDVDGTLTAPRKESTPQMLKFMQELRKVVTVGVVGGSDLVKISEQLGNT 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           V ++YDYVFSENGLVAHKDGKLIG QSLKS LG EKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VTNDYDYVFSENGLVAHKDGKLIGKQSLKSHLGDEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGRNCSQEERDEFE+YDK+  IR  MVSVLREKFAH NLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQKIRETMVSVLREKFAHFNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYL++FNEIHFFGDKTYKGGNDHEI+ESERTVGHTVTSPE+T+++C
Sbjct: 181 FDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPEETLKQC 240

Query: 241 KALFLAK 247
             LFL K
Sbjct: 241 SVLFLGK 247

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Solanum lycopersicum (taxid: 4081)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|O80840|PMM_ARATH Phosphomannomutase OS=Arabidopsis thaliana GN=PMM PE=1 SV=1

 Score =  433 bits (1114), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 201/246 (81%), Positives = 231/246 (93%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAA+  G++ALFDVDGTLTAPRK ATP++L+F+RELRKVVT+GVVGGSDLSKISEQLGKT
Sbjct: 1   MAAKIPGVIALFDVDGTLTAPRKEATPELLDFIRELRKVVTIGVVGGSDLSKISEQLGKT 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           V ++YDY FSENGLVAHKDGK IG QSLK  LG +KLKE INFTLHYIADLDIPIKRGTF
Sbjct: 61  VTNDYDYCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFR+GMLN+SPIGRNCSQEERDEFERYDK+ NIRPKMV+ LRE+FAHLNLTFSIGGQIS
Sbjct: 121 IEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFP+GWDKTYCL+YL+DF+EIHFFGDKTY+GGND+EI+ES +T+GH+VTSP+DT+ KC
Sbjct: 181 FDVFPKGWDKTYCLQYLEDFSEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPDDTVAKC 240

Query: 241 KALFLA 246
           KALF++
Sbjct: 241 KALFMS 246

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q9UTJ2|PMM_SCHPO Phosphomannomutase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmm1 PE=2 SV=1

 Score =  320 bits (819), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 152/241 (63%), Positives = 191/241 (79%), Gaps = 5/241 (2%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQL---GKTVIDEY 65
           L LFDVDGTLT  R + +P+MLE ++ LRKVV +G VGGSDLSK  EQL   G+ VID +
Sbjct: 15  LVLFDVDGTLTPARLSVSPEMLETLQNLRKVVAIGFVGGSDLSKQQEQLSVNGENVIDSF 74

Query: 66  DYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS 125
           DY F+ENGL A++ G+ + +QS  ++LG EK ++ +NF LHYIADLDIP+KRGTFIEFR+
Sbjct: 75  DYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRN 134

Query: 126 GMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP 185
           GM+NISP+GRN + EER+EFER+DK   IR  MV VLREKF    LTFSIGGQISFDVFP
Sbjct: 135 GMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFKDYGLTFSIGGQISFDVFP 194

Query: 186 QGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL 243
            GWDKTYCL++++   F+ IHFFGDKTYKGGND+EIF   RT+GH+VT+P+DT+ + K +
Sbjct: 195 AGWDKTYCLQHVEKEGFDTIHFFGDKTYKGGNDYEIFVDPRTIGHSVTNPDDTIAELKKI 254

Query: 244 F 244
           F
Sbjct: 255 F 255

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q54X03|PMM1_DICDI Phosphomannomutase 1 OS=Dictyostelium discoideum GN=pmmA PE=3 SV=1

 Score =  318 bits (814), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 154/239 (64%), Positives = 186/239 (77%), Gaps = 3/239 (1%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
           + LFDVDGTLT PR   TP+M +F+  LR  V +GVVGGSD++KI EQLG+  I+E+ Y+
Sbjct: 8   ICLFDVDGTLTKPRNVITPEMKDFLAGLRTKVELGVVGGSDINKIKEQLGENCINEFHYL 67

Query: 69  FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
           F+ENGL++ KDG L+ TQ +K FLG E +K+FINF LHYIADLDIPIKRGTF+EFR+GM+
Sbjct: 68  FAENGLLSFKDGSLLATQDIKKFLGEENIKKFINFVLHYIADLDIPIKRGTFVEFRNGMI 127

Query: 129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGW 188
           NISPIGRNCSQ+ER+EFE+YD  H IRP MVS+L+EKF  L L +SIGGQISFDVFP GW
Sbjct: 128 NISPIGRNCSQQEREEFEKYDLEHKIRPTMVSILKEKFQSLGLQYSIGGQISFDVFPIGW 187

Query: 189 DKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESER-TVGHTVTSPEDTMEKCKALF 244
           DKTYCLR+L  D +  I+FFGDKT+ GGND+EI    R T   TVTSP DT      LF
Sbjct: 188 DKTYCLRHLPEDKYKTIYFFGDKTFVGGNDYEIANDPRITKSFTVTSPTDTKNFLSELF 246

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Dictyostelium discoideum (taxid: 44689)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q86B09|PMM2_DICDI Phosphomannomutase 2 OS=Dictyostelium discoideum GN=pmmB PE=3 SV=2

 Score =  307 bits (787), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 146/248 (58%), Positives = 186/248 (75%), Gaps = 3/248 (1%)

Query: 3   ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVI 62
           ++ +  + LFDVD TLT PR A T +M E +  LR  + +GVVGGS+ +KI EQLG+  I
Sbjct: 2   SQNKNTICLFDVDDTLTKPRNAITNEMKELLASLRTKIKIGVVGGSNFNKIKEQLGENFI 61

Query: 63  DEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIE 122
           +++DYVF+ENGL+A+KDG L+  Q +K +LG E +K+FINF LHY+ADLDIPIKRGTF+E
Sbjct: 62  NDFDYVFAENGLIAYKDGSLLEIQDIKKYLGEENIKKFINFVLHYVADLDIPIKRGTFVE 121

Query: 123 FRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFD 182
           FR+GMLNISPIGRNCSQ+ER+EFE+YD  H IR  MVS+L+E+F    L +SIGGQISFD
Sbjct: 122 FRNGMLNISPIGRNCSQQEREEFEKYDLEHKIRSTMVSILKEEFKSFGLQYSIGGQISFD 181

Query: 183 VFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESER-TVGHTVTSPEDTMEK 239
           VFP GWDKTYCLR+L  D+F  ++FFGDKT+ GGND+EI    R T   TV SP +T+  
Sbjct: 182 VFPIGWDKTYCLRHLPEDEFKTLYFFGDKTFLGGNDYEIANHPRITQSFTVKSPANTLAI 241

Query: 240 CKALFLAK 247
               F  K
Sbjct: 242 LNDFFFKK 249

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Dictyostelium discoideum (taxid: 44689)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
225454105	249	PREDICTED: phosphomannomutase isoform 2	0.995	0.991	0.910	1e-132
147856872	249	hypothetical protein VITISV_006228 [Viti	0.995	0.991	0.910	1e-131
118488485	246	unknown [Populus trichocarpa]	0.991	1.0	0.906	1e-131
224127594	246	predicted protein [Populus trichocarpa]	0.991	1.0	0.890	1e-128
242074812	249	hypothetical protein SORBIDRAFT_06g03328	0.991	0.987	0.849	1e-124
226530195	249	uncharacterized protein LOC100272867 [Ze	0.991	0.987	0.849	1e-124
257071836	251	phosphomannomutase D2 [Triticum aestivum	0.991	0.980	0.846	1e-124
122194124	249	RecName: Full=Phosphomannomutase; AltNam	0.991	0.987	0.850	1e-124
115461390	248	Os04g0682300 [Oryza sativa Japonica Grou	0.995	0.995	0.846	1e-124
224549860	248	phosphomannomutase [Malpighia glabra]	0.991	0.991	0.902	1e-123

>gi|225454105|ref|XP_002267677.1| PREDICTED: phosphomannomutase isoform 2 [Vitis vinifera] gi|297745223|emb|CBI40303.3| unnamed protein product [Vitis vinifera]

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/247 (91%), Positives = 238/247 (96%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAARK GL+ALFDVDGTLTAPRK ATPQMLEFMR+LRKV+TVGVVGGSDL KISEQLG +
Sbjct: 1   MAARKAGLIALFDVDGTLTAPRKVATPQMLEFMRKLRKVITVGVVGGSDLVKISEQLGSS 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VID+YDYVFSENGLVAHKDGKLIGTQSLK+FLG EKLKE INFTLHYIADLDIPIKRGTF
Sbjct: 61  VIDDYDYVFSENGLVAHKDGKLIGTQSLKTFLGEEKLKEIINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGRNCSQEERDEFE+YDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYLDDF EIHFFGDKTY+ GNDHEI+ESERTVGHTVTSP+DT+E+C
Sbjct: 181 FDVFPQGWDKTYCLRYLDDFPEIHFFGDKTYEAGNDHEIYESERTVGHTVTSPDDTVEQC 240

Query: 241 KALFLAK 247
            ALFLAK
Sbjct: 241 TALFLAK 247

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856872|emb|CAN81334.1| hypothetical protein VITISV_006228 [Vitis vinifera]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/247 (91%), Positives = 238/247 (96%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAARK GL+ALFDVDGTLTAPRK ATPQMLEFMR+LRKV+TVGVVGGSDL KISEQLG +
Sbjct: 1   MAARKAGLIALFDVDGTLTAPRKVATPQMLEFMRKLRKVITVGVVGGSDLVKISEQLGSS 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VID+YDYVFSENGLVAHKDGKLIGTQSLK+FLG EKLKE INFTLHYIADLDIPIKRGTF
Sbjct: 61  VIDDYDYVFSENGLVAHKDGKLIGTQSLKTFLGEEKLKEIINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGRNCSQEERDEFE+YDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYLDDF EIHFFGDKTY+ GNDHEI+ESERTVGHTVTSP+DT+E+C
Sbjct: 181 FDVFPQGWDKTYCLRYLDDFPEIHFFGDKTYEXGNDHEIYESERTVGHTVTSPDDTVEQC 240

Query: 241 KALFLAK 247
            ALFLAK
Sbjct: 241 TALFLAK 247

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488485|gb|ABK96056.1| unknown [Populus trichocarpa]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/246 (90%), Positives = 239/246 (97%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MA RK GL+ALFDVDGTLTAPRK ATP M+EF++ELRKVVT+GVVGGSDLSKISEQLGKT
Sbjct: 1   MAVRKPGLIALFDVDGTLTAPRKEATPSMIEFVKELRKVVTIGVVGGSDLSKISEQLGKT 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VI++YDYVFSENGLVAHKDGKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGRNCSQEERDEFE+YDK+ NIRPKMVSVLREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYLD+F+EIHFFGDKTYKGGNDHEI+ESERTVGHTVTSP+DT+E+C
Sbjct: 181 FDVFPQGWDKTYCLRYLDEFSEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPDDTVEQC 240

Query: 241 KALFLA 246
           KALF A
Sbjct: 241 KALFFA 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127594|ref|XP_002320113.1| predicted protein [Populus trichocarpa] gi|222860886|gb|EEE98428.1| predicted protein [Populus trichocarpa]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/246 (89%), Positives = 236/246 (95%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MA RK GL+ALFDVD TLTAPRK ATP M+EF++ELRKVVT+GVVGGSDLSKISEQLGKT
Sbjct: 1   MAVRKPGLIALFDVDDTLTAPRKEATPSMIEFVKELRKVVTIGVVGGSDLSKISEQLGKT 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VI++YDYVFSENGLVAHKDGKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IE RSGMLN+SPIGRNCSQEERDEFE+YDK+ NIRPKM+SVL EKFAHLNLTFSIGGQIS
Sbjct: 121 IELRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMLSVLCEKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYLD+F+EIHFFGDKTYKGGNDHEI+ESERTVGHTVTSP+DT+E+C
Sbjct: 181 FDVFPQGWDKTYCLRYLDEFSEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPDDTVEQC 240

Query: 241 KALFLA 246
           KALF A
Sbjct: 241 KALFFA 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242074812|ref|XP_002447342.1| hypothetical protein SORBIDRAFT_06g033280 [Sorghum bicolor] gi|241938525|gb|EES11670.1| hypothetical protein SORBIDRAFT_06g033280 [Sorghum bicolor]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/246 (84%), Positives = 233/246 (94%)

Query: 2   AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTV 61
           A R  G+LALFDVDGTLTAPRK  TP+MLEFM++LR+ VTVGVVGGSDL KI+EQLG TV
Sbjct: 4   AGRNAGVLALFDVDGTLTAPRKVVTPEMLEFMKQLRQHVTVGVVGGSDLVKITEQLGNTV 63

Query: 62  IDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFI 121
           I +YDYVFSENGLVAHK+G+LIGTQSLKSF+G +KLKEFINFTLHYIADLDIPIKRGTFI
Sbjct: 64  ITDYDYVFSENGLVAHKNGQLIGTQSLKSFVGEDKLKEFINFTLHYIADLDIPIKRGTFI 123

Query: 122 EFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISF 181
           EFRSGM+N+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQISF
Sbjct: 124 EFRSGMINVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISF 183

Query: 182 DVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK 241
           DVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGND+EIFESERTVGHTVTSP DT ++C+
Sbjct: 184 DVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESERTVGHTVTSPNDTAQQCR 243

Query: 242 ALFLAK 247
           +LF++K
Sbjct: 244 SLFMSK 249

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226530195|ref|NP_001140792.1| uncharacterized protein LOC100272867 [Zea mays] gi|194701096|gb|ACF84632.1| unknown [Zea mays] gi|194701110|gb|ACF84639.1| unknown [Zea mays] gi|223947667|gb|ACN27917.1| unknown [Zea mays] gi|238009672|gb|ACR35871.1| unknown [Zea mays] gi|414584724|tpg|DAA35295.1| TPA: hypothetical protein ZEAMMB73_474117 [Zea mays] gi|414584725|tpg|DAA35296.1| TPA: hypothetical protein ZEAMMB73_474117 [Zea mays] gi|414584726|tpg|DAA35297.1| TPA: hypothetical protein ZEAMMB73_474117 [Zea mays] gi|414584727|tpg|DAA35298.1| TPA: hypothetical protein ZEAMMB73_474117 [Zea mays] gi|414584728|tpg|DAA35299.1| TPA: hypothetical protein ZEAMMB73_474117 [Zea mays]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/246 (84%), Positives = 233/246 (94%)

Query: 2   AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTV 61
           A R  G+LALFDVDGTLTAPRK  TP+MLEFM++LR+ VTVGVVGGSDL KI+EQLG TV
Sbjct: 4   AGRNAGVLALFDVDGTLTAPRKGVTPEMLEFMKQLRQHVTVGVVGGSDLVKITEQLGSTV 63

Query: 62  IDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFI 121
           I +YDYVFSENGLVAHK+G+LIGTQSLKSF+G +KLKEFINFTLHYIADLDIPIKRGTFI
Sbjct: 64  ITDYDYVFSENGLVAHKNGQLIGTQSLKSFIGEDKLKEFINFTLHYIADLDIPIKRGTFI 123

Query: 122 EFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISF 181
           EFRSGM+N+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAH+NLTFSIGGQISF
Sbjct: 124 EFRSGMINVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHMNLTFSIGGQISF 183

Query: 182 DVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK 241
           DVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGND+EIFESERTVGHTVTSP DT ++C+
Sbjct: 184 DVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESERTVGHTVTSPSDTAQQCR 243

Query: 242 ALFLAK 247
           +LFL+K
Sbjct: 244 SLFLSK 249

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|257071836|gb|ACV41080.1| phosphomannomutase D2 [Triticum aestivum] gi|257071850|gb|ACV41086.1| phosphomannomutase D2 [Aegilops tauschii]

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/247 (84%), Positives = 236/247 (95%), Gaps = 1/247 (0%)

Query: 2   AARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           AARK  G+LALFDVDGTLTAPRK  TP+MLEFM+ LR+ VTVGVVGGSDL KISEQLGK+
Sbjct: 5   AARKNAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKS 64

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VI +YDYVFSENGLVAHKDGKLIGTQSLK++LG ++LKEFINFTLHYIADLDIPIKRGTF
Sbjct: 65  VITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTF 124

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGM+N+SPIGRNCSQEERD+FE+YDK+HN+RPKMVS+LREKFAHLNLTFSIGGQIS
Sbjct: 125 IEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSMLREKFAHLNLTFSIGGQIS 184

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFP GWDKTYCLRYLD+F EIHFFGDKTYKGGNDHEIFES+RTVGHTVTSP+DT+++C
Sbjct: 185 FDVFPHGWDKTYCLRYLDEFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPDDTVQQC 244

Query: 241 KALFLAK 247
           +++FL+K
Sbjct: 245 RSIFLSK 251

Source: Triticum aestivum

Species: Triticum aestivum

Genus: Triticum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|122194124|sp|Q1W374.1|PMM_WHEAT RecName: Full=Phosphomannomutase; AltName: Full=TaPMM gi|90762172|gb|ABD97875.1| phosphomannomutase [Triticum aestivum] gi|257071827|gb|ACV41076.1| phosphomannomutase A1 [Triticum aestivum] gi|257071845|gb|ACV41084.1| phosphomannomutase A1 [Triticum urartu] gi|410832832|gb|AFV92897.1| phosphomannomutase A1 [Triticum monococcum]

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/247 (85%), Positives = 236/247 (95%), Gaps = 1/247 (0%)

Query: 2   AARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           AARK  G+LALFDVDGTLTAPRK  TP+MLEFM+ LR+ VTVGVVGGSDL KISEQLGK+
Sbjct: 3   AARKDAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKS 62

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VI +YDYVFSENGLVAHKDGKLIGTQSLK++LG ++LKEFINFTLHYIADLDIPIKRGTF
Sbjct: 63  VITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTF 122

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGM+N+SPIGRNCSQEERD+FE+YDK+HN+RPKMVSVLREKFAHLNLTFSIGGQIS
Sbjct: 123 IEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQIS 182

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGNDHEIFES+RTVGHTVTSP DT+++C
Sbjct: 183 FDVFPQGWDKTYCLRYLEEFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQC 242

Query: 241 KALFLAK 247
           K++FL++
Sbjct: 243 KSIFLSE 249

Source: Triticum aestivum

Species: Triticum aestivum

Genus: Triticum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115461390|ref|NP_001054295.1| Os04g0682300 [Oryza sativa Japonica Group] gi|75143801|sp|Q7XPW5.2|PMM_ORYSJ RecName: Full=Phosphomannomutase; Short=OsPMM gi|122195780|sp|Q259G4.1|PMM_ORYSI RecName: Full=Phosphomannomutase; Short=OsPMM gi|38345559|emb|CAE03433.2| OSJNBa0032F06.16 [Oryza sativa Japonica Group] gi|90399073|emb|CAJ86295.1| H0124B04.12 [Oryza sativa Indica Group] gi|90762125|gb|ABD97871.1| phosphomannomutase [Oryza sativa Japonica Group] gi|113565866|dbj|BAF16209.1| Os04g0682300 [Oryza sativa Japonica Group] gi|125592104|gb|EAZ32454.1| hypothetical protein OsJ_16666 [Oryza sativa Japonica Group] gi|215678937|dbj|BAG96367.1| unnamed protein product [Oryza sativa Japonica Group] gi|215692473|dbj|BAG87893.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/248 (84%), Positives = 236/248 (95%), Gaps = 1/248 (0%)

Query: 1   MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK 59
           MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK
Sbjct: 1   MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGK 60

Query: 60  TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGT 119
           +V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGT
Sbjct: 61  SVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGT 120

Query: 120 FIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQI 179
           FIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQI
Sbjct: 121 FIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQI 180

Query: 180 SFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239
           SFDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGND+EIFES+RT+GHTVTSP+DT E+
Sbjct: 181 SFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQ 240

Query: 240 CKALFLAK 247
           C++LF++K
Sbjct: 241 CRSLFMSK 248

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224549860|gb|ACN54046.1| phosphomannomutase [Malpighia glabra]

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/246 (90%), Positives = 240/246 (97%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAA+  G+LALFDVDGTLTAPRK ++P++LEFM+ELRKVVTVGVVGGSDLSKISEQLGKT
Sbjct: 1   MAAKIPGVLALFDVDGTLTAPRKVSSPKVLEFMQELRKVVTVGVVGGSDLSKISEQLGKT 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VID+YDYVFSENGLVAHKDGKLIGTQSLKSFLG EKLKE INFTLHYIADLDIPIKRGTF
Sbjct: 61  VIDDYDYVFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEIINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFA LNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFARLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCLRYLD+F+EIHFFGDKTY+GGND+EI+ESERTVGHTVTSP+DTME+C
Sbjct: 181 FDVFPQGWDKTYCLRYLDEFSEIHFFGDKTYEGGNDYEIYESERTVGHTVTSPDDTMEQC 240

Query: 241 KALFLA 246
           KALFLA
Sbjct: 241 KALFLA 246

Source: Malpighia glabra

Species: Malpighia glabra

Genus: Malpighia

Family: Malpighiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
TAIR|locus:2050751	246	PMM "phosphomannomutase" [Arab	0.991	1.0	0.817	5.3e-111
DICTYBASE|DDB_G0279289	249	pmmA "phosphomannomutase" [Dic	0.951	0.947	0.644	4.1e-81
POMBASE|SPAC1556.07	257	pmm1 "phosphomannomutase Pmm1"	0.951	0.918	0.630	2.9e-80
DICTYBASE|DDB_G0272781	249	pmmB "phosphomannomutase B" [D	0.987	0.983	0.588	2.1e-77
UNIPROTKB|O15305	246	PMM2 "Phosphomannomutase 2" [H	0.951	0.959	0.613	7.1e-77
UNIPROTKB|F1N8Z6	251	PMM2 "Uncharacterized protein"	0.983	0.972	0.605	1.5e-76
UNIPROTKB|E1C4B8	249	PMM2 "Uncharacterized protein"	0.983	0.979	0.604	5e-76
UNIPROTKB|E2R832	251	PMM2 "Uncharacterized protein"	0.979	0.968	0.601	1.3e-75
MGI|MGI:1859214	242	Pmm2 "phosphomannomutase 2" [M	0.951	0.975	0.605	1.3e-75
RGD|1309366	242	Pmm2 "phosphomannomutase 2" [R	0.951	0.975	0.609	1.7e-75

TAIR|locus:2050751 PMM "phosphomannomutase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
 Identities = 201/246 (81%), Positives = 231/246 (93%)

Query:     1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
             MAA+  G++ALFDVDGTLTAPRK ATP++L+F+RELRKVVT+GVVGGSDLSKISEQLGKT
Sbjct:     1 MAAKIPGVIALFDVDGTLTAPRKEATPELLDFIRELRKVVTIGVVGGSDLSKISEQLGKT 60

Query:    61 VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
             V ++YDY FSENGLVAHKDGK IG QSLK  LG +KLKE INFTLHYIADLDIPIKRGTF
Sbjct:    61 VTNDYDYCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTF 120

Query:   121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
             IEFR+GMLN+SPIGRNCSQEERDEFERYDK+ NIRPKMV+ LRE+FAHLNLTFSIGGQIS
Sbjct:   121 IEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQIS 180

Query:   181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
             FDVFP+GWDKTYCL+YL+DF+EIHFFGDKTY+GGND+EI+ES +T+GH+VTSP+DT+ KC
Sbjct:   181 FDVFPKGWDKTYCLQYLEDFSEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPDDTVAKC 240

Query:   241 KALFLA 246
             KALF++
Sbjct:   241 KALFMS 246

GO:0003824 "catalytic activity" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA;IGI;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA;ISS

GO:0019853 "L-ascorbic acid biosynthetic process" evidence=IMP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0019932 "second-messenger-mediated signaling" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

DICTYBASE|DDB_G0279289 pmmA "phosphomannomutase" [Dictyostelium discoideum (taxid:44689)]

 Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
 Identities = 154/239 (64%), Positives = 186/239 (77%)

Query:     9 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
             + LFDVDGTLT PR   TP+M +F+  LR  V +GVVGGSD++KI EQLG+  I+E+ Y+
Sbjct:     8 ICLFDVDGTLTKPRNVITPEMKDFLAGLRTKVELGVVGGSDINKIKEQLGENCINEFHYL 67

Query:    69 FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
             F+ENGL++ KDG L+ TQ +K FLG E +K+FINF LHYIADLDIPIKRGTF+EFR+GM+
Sbjct:    68 FAENGLLSFKDGSLLATQDIKKFLGEENIKKFINFVLHYIADLDIPIKRGTFVEFRNGMI 127

Query:   129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGW 188
             NISPIGRNCSQ+ER+EFE+YD  H IRP MVS+L+EKF  L L +SIGGQISFDVFP GW
Sbjct:   128 NISPIGRNCSQQEREEFEKYDLEHKIRPTMVSILKEKFQSLGLQYSIGGQISFDVFPIGW 187

Query:   189 DKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESER-TVGHTVTSPEDTMEKCKALF 244
             DKTYCLR+L  D +  I+FFGDKT+ GGND+EI    R T   TVTSP DT      LF
Sbjct:   188 DKTYCLRHLPEDKYKTIYFFGDKTFVGGNDYEIANDPRITKSFTVTSPTDTKNFLSELF 246

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0009298 "GDP-mannose biosynthetic process" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

POMBASE|SPAC1556.07 pmm1 "phosphomannomutase Pmm1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
 Identities = 152/241 (63%), Positives = 191/241 (79%)

Query:     9 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQL---GKTVIDEY 65
             L LFDVDGTLT  R + +P+MLE ++ LRKVV +G VGGSDLSK  EQL   G+ VID +
Sbjct:    15 LVLFDVDGTLTPARLSVSPEMLETLQNLRKVVAIGFVGGSDLSKQQEQLSVNGENVIDSF 74

Query:    66 DYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS 125
             DY F+ENGL A++ G+ + +QS  ++LG EK ++ +NF LHYIADLDIP+KRGTFIEFR+
Sbjct:    75 DYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRN 134

Query:   126 GMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP 185
             GM+NISP+GRN + EER+EFER+DK   IR  MV VLREKF    LTFSIGGQISFDVFP
Sbjct:   135 GMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFKDYGLTFSIGGQISFDVFP 194

Query:   186 QGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL 243
              GWDKTYCL++++   F+ IHFFGDKTYKGGND+EIF   RT+GH+VT+P+DT+ + K +
Sbjct:   195 AGWDKTYCLQHVEKEGFDTIHFFGDKTYKGGNDYEIFVDPRTIGHSVTNPDDTIAELKKI 254

Query:   244 F 244
             F
Sbjct:   255 F 255

GO:0004615 "phosphomannomutase activity" evidence=ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0006886 "intracellular protein transport" evidence=IMP

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP

GO:0006998 "nuclear envelope organization" evidence=IMP

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0045047 "protein targeting to ER" evidence=ISO

DICTYBASE|DDB_G0272781 pmmB "phosphomannomutase B" [Dictyostelium discoideum (taxid:44689)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 146/248 (58%), Positives = 186/248 (75%)

Query:     3 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVI 62
             ++ +  + LFDVD TLT PR A T +M E +  LR  + +GVVGGS+ +KI EQLG+  I
Sbjct:     2 SQNKNTICLFDVDDTLTKPRNAITNEMKELLASLRTKIKIGVVGGSNFNKIKEQLGENFI 61

Query:    63 DEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIE 122
             +++DYVF+ENGL+A+KDG L+  Q +K +LG E +K+FINF LHY+ADLDIPIKRGTF+E
Sbjct:    62 NDFDYVFAENGLIAYKDGSLLEIQDIKKYLGEENIKKFINFVLHYVADLDIPIKRGTFVE 121

Query:   123 FRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFD 182
             FR+GMLNISPIGRNCSQ+ER+EFE+YD  H IR  MVS+L+E+F    L +SIGGQISFD
Sbjct:   122 FRNGMLNISPIGRNCSQQEREEFEKYDLEHKIRSTMVSILKEEFKSFGLQYSIGGQISFD 181

Query:   183 VFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESER-TVGHTVTSPEDTMEK 239
             VFP GWDKTYCLR+L  D+F  ++FFGDKT+ GGND+EI    R T   TV SP +T+  
Sbjct:   182 VFPIGWDKTYCLRHLPEDEFKTLYFFGDKTFLGGNDYEIANHPRITQSFTVKSPANTLAI 241

Query:   240 CKALFLAK 247
                 F  K
Sbjct:   242 LNDFFFKK 249

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0009298 "GDP-mannose biosynthetic process" evidence=IEA

UNIPROTKB|O15305 PMM2 "Phosphomannomutase 2" [Homo sapiens (taxid:9606)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 146/238 (61%), Positives = 185/238 (77%)

Query:     9 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
             L LFDVDGTLTAPR+  T +M +F+++LR+ + +GVVGGSD  K+ EQLG  V+++YDYV
Sbjct:     8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYV 67

Query:    69 FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
             F ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFIEFR+GML
Sbjct:    68 FPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGML 127

Query:   129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGW 188
             N+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISFDVFP GW
Sbjct:   128 NVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGW 187

Query:   189 DKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
             DK YCLR++  D +  I+FFGDKT  GGNDHEIF   RT+G++VT+PEDT   C+ LF
Sbjct:   188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0009298 "GDP-mannose biosynthetic process" evidence=IEA;TAS

GO:0006486 "protein glycosylation" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|F1N8Z6 PMM2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 149/246 (60%), Positives = 184/246 (74%)

Query:     1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
             MA  ++ +L LFDVDGTLTAPR+  T +M EF++ LR+ V VGVVGGSD  KI EQLG  
Sbjct:     5 MAPPERAVLCLFDVDGTLTAPRQKITAEMAEFLQRLRQKVKVGVVGGSDFEKIKEQLGDD 64

Query:    61 VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
             V++++DYVF ENGLVA+KDGK    Q+++S LG + L++ IN+ L YIA + +P KRGTF
Sbjct:    65 VVEKFDYVFPENGLVAYKDGKFFSKQNIQSHLGEDVLQDLINYCLSYIAKIKLPKKRGTF 124

Query:   121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
             IEFR+GMLN+SPIGR+CSQEER EF   DK  +IR K V+ LR +FA   LTFSIGGQIS
Sbjct:   125 IEFRNGMLNVSPIGRSCSQEERIEFYELDKKEHIREKFVADLRREFAGKGLTFSIGGQIS 184

Query:   181 FDVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTME 238
             FDVFP GWDK YCL  +  D +  I+FFGDKT  GGND+EIF   RT GH+VTSP+DT  
Sbjct:   185 FDVFPDGWDKRYCLGIIAEDGYKTIYFFGDKTMPGGNDYEIFTDSRTEGHSVTSPQDTRR 244

Query:   239 KCKALF 244
              C+ LF
Sbjct:   245 ICEELF 250

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

UNIPROTKB|E1C4B8 PMM2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 150/248 (60%), Positives = 185/248 (74%)

Query:     1 MAARKQGLLALFDVDGTLTAPRKAA--TPQMLEFMRELRKVVTVGVVGGSDLSKISEQLG 58
             MA  ++ +L LFDVDGTLTAPR+A   T +M EF++ LR+ V VGVVGGSD  KI EQLG
Sbjct:     1 MAPPERAVLCLFDVDGTLTAPRQATKITAEMAEFLQRLRQKVKVGVVGGSDFEKIKEQLG 60

Query:    59 KTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRG 118
               V++++DYVF ENGLVA+KDGK    Q+++S LG + L++ IN+ L YIA + +P KRG
Sbjct:    61 DDVVEKFDYVFPENGLVAYKDGKFFSKQNIQSHLGEDVLQDLINYCLSYIAKIKLPKKRG 120

Query:   119 TFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 178
             TFIEFR+GMLN+SPIGR+CSQEER EF   DK  +IR K V+ LR +FA   LTFSIGGQ
Sbjct:   121 TFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKEHIREKFVADLRREFAGKGLTFSIGGQ 180

Query:   179 ISFDVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDT 236
             ISFDVFP GWDK YCL  +  D +  I+FFGDKT  GGND+EIF   RT GH+VTSP+DT
Sbjct:   181 ISFDVFPDGWDKRYCLGIIAEDGYKTIYFFGDKTMPGGNDYEIFTDSRTEGHSVTSPQDT 240

Query:   237 MEKCKALF 244
                C+ LF
Sbjct:   241 RRICEELF 248

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

UNIPROTKB|E2R832 PMM2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 148/246 (60%), Positives = 183/246 (74%)

Query:     1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
             MAA    L  LFDVDGTLTAPR+  T +M  F++ LR+ + +GVVGGSD  K+ EQLG  
Sbjct:     6 MAASGSAL-CLFDVDGTLTAPRQKITEEMDGFLQNLRQRIKIGVVGGSDFEKVQEQLGND 64

Query:    61 VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
             V+ +YDYVF ENGLVA+KDGKL+  Q+++  LG   +++ IN+ L YIA + +P KRGTF
Sbjct:    65 VVKKYDYVFPENGLVAYKDGKLLCKQNIQGHLGEALIQDLINYCLSYIAKIKLPKKRGTF 124

Query:   121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
             IEFR+GMLN+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   +TFSIGGQIS
Sbjct:   125 IEFRNGMLNVSPIGRSCSQEERIEFHELDKKENIRQKFVADLRKEFAGKGVTFSIGGQIS 184

Query:   181 FDVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTME 238
              DVFP GWDK YCLR++  D +  I+FFGDKT  GGNDHEIF   RTVG+TVT+PEDT  
Sbjct:   185 IDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAPEDTRR 244

Query:   239 KCKALF 244
              C+ LF
Sbjct:   245 ICEELF 250

GO:0043025 "neuronal cell body" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

MGI|MGI:1859214 Pmm2 "phosphomannomutase 2" [Mus musculus (taxid:10090)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 144/238 (60%), Positives = 184/238 (77%)

Query:     9 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
             L LFD+DGTLTAPR+  T +M  F+++LR+   +GVVGGSD  K+ EQLG  V+++YDYV
Sbjct:     4 LCLFDMDGTLTAPRQKITEEMDGFLQKLRQKTKIGVVGGSDFEKLQEQLGNDVVEKYDYV 63

Query:    69 FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
             F ENGLVA+KDGKL+  Q+++  LG + +++ IN+ L YIA++ +P KRGTFIEFR+GML
Sbjct:    64 FPENGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRNGML 123

Query:   129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGW 188
             N+SPIGR+CSQEER EF   DK  +IR K V+ LR++FA   LTFSIGGQIS DVFP+GW
Sbjct:   124 NVSPIGRSCSQEERIEFYELDKKEHIRQKFVADLRKEFAGKGLTFSIGGQISIDVFPEGW 183

Query:   189 DKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
             DK YCLR+L+   +  I+FFGDKT  GGNDHEIF   RTVG+TVT+PEDT   C+ LF
Sbjct:   184 DKRYCLRHLEHAGYKTIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAPEDTRRICEGLF 241

GO:0003824 "catalytic activity" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IDA

RGD|1309366 Pmm2 "phosphomannomutase 2" [Rattus norvegicus (taxid:10116)]

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 145/238 (60%), Positives = 182/238 (76%)

Query:     9 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
             L LFD+DGTLTAPR+  T +M  F+++LR+   +GVVGGSD  K+ EQLG  V+++YDYV
Sbjct:     4 LCLFDMDGTLTAPRQKITKEMDGFLQKLRQKTKIGVVGGSDFEKLQEQLGNDVVEKYDYV 63

Query:    69 FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
             F ENGLVA+KDGKL+  Q+++  LG   +++ IN+ L YIA + +P KRGTFIEFR+GML
Sbjct:    64 FPENGLVAYKDGKLLCKQNIQGHLGEAVIQDLINYCLSYIAKIKLPKKRGTFIEFRNGML 123

Query:   129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGW 188
             N+SPIGR+CSQEER EF   DK  +IR K V+ LR++FA   LTFSIGGQISFDVFP GW
Sbjct:   124 NVSPIGRSCSQEERIEFYELDKKEHIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGW 183

Query:   189 DKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
             DK YCLR+L+   +  I+FFGDKT  GGNDHEIF   RTVG+TVT+PEDT   C+ LF
Sbjct:   184 DKRYCLRHLEQAGYKTIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAPEDTRRICEELF 241

GO:0003674 "molecular_function" evidence=ND

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9XUE6	PMM_CAEEL	5, ., 4, ., 2, ., 8	0.5793	0.9193	0.8976	yes	no
Q7XPW5	PMM_ORYSJ	5, ., 4, ., 2, ., 8	0.8467	0.9959	0.9959	yes	no
Q9UTJ2	PMM_SCHPO	5, ., 4, ., 2, ., 8	0.6307	0.9516	0.9182	yes	no
Q3SZJ9	PMM2_BOVIN	5, ., 4, ., 2, ., 8	0.6050	0.9516	0.9593	yes	no
O80840	PMM_ARATH	5, ., 4, ., 2, ., 8	0.8170	0.9919	1.0	yes	no
P07283	PMM_YEAST	5, ., 4, ., 2, ., 8	0.5798	0.9516	0.9291	yes	no
Q9Z2M7	PMM2_MOUSE	5, ., 4, ., 2, ., 8	0.6050	0.9516	0.9752	yes	no
Q9VTZ6	PMM_DROME	5, ., 4, ., 2, ., 8	0.55	0.9475	0.9251	yes	no
Q8SVM5	PMM_ENCCU	5, ., 4, ., 2, ., 8	0.4895	0.9556	0.9257	yes	no
Q1W376	PMM_SOYBN	5, ., 4, ., 2, ., 8	0.8979	0.9879	0.9919	yes	no
Q1W375	PMM_TOBAC	5, ., 4, ., 2, ., 8	0.8785	0.9959	0.9801	N/A	no
Q1W374	PMM_WHEAT	5, ., 4, ., 2, ., 8	0.8502	0.9919	0.9879	N/A	no
P31353	PMM_CANAL	5, ., 4, ., 2, ., 8	0.5546	0.9516	0.9365	N/A	no
Q54X03	PMM1_DICDI	5, ., 4, ., 2, ., 8	0.6443	0.9516	0.9477	yes	no
Q60HD6	PMM2_MACFA	5, ., 4, ., 2, ., 8	0.6176	0.9516	0.9593	N/A	no
Q259G4	PMM_ORYSI	5, ., 4, ., 2, ., 8	0.8467	0.9959	0.9959	N/A	no
O15305	PMM2_HUMAN	5, ., 4, ., 2, ., 8	0.6134	0.9516	0.9593	yes	no
Q1W377	PMM_SOLLC	5, ., 4, ., 2, ., 8	0.8704	0.9959	0.9801	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	5.4.2.8	0.994
3rd Layer	5.4.2	0.998

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00026780001	SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (249 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00038234001	RecName- Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; (420 aa)				•		•	•		0.982
	GSVIVG00018410001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (361 aa)				•		•	•		0.973
	GSVIVG00014427001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (485 aa)				•		•			0.916
	GSVIVG00016656001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (470 aa)				•		•			0.914
	GSVIVG00034293001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (498 aa)				•		•			0.914
	GSVIVG00022229001	SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (523 aa)				•		•			0.911
	GSVIVG00010644001	SubName- Full=Chromosome chr7 scaffold_275, whole genome shotgun sequence; (479 aa)						•			0.899
	GSVIVG00001918001	SubName- Full=Chromosome chr5 scaffold_124, whole genome shotgun sequence; (1153 aa)				•	•				0.599
	GSVIVG00015572001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (243 aa)				•			•		0.531
	GSVIVG00025575001	SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (307 aa)				•					0.483

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	248
PLN02423	245	PLN02423, PLN02423, phosphomannomutase	0.0
PTZ00174	247	PTZ00174, PTZ00174, phosphomannomutase; Provisiona	1e-153
pfam03332	219	pfam03332, PMM, Eukaryotic phosphomannomutase	1e-138
COG0561	264	COG0561, Cof, Predicted hydrolases of the HAD supe	3e-26
TIGR01484	204	TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase,	1e-21
pfam08282	254	pfam08282, Hydrolase_3, haloacid dehalogenase-like	7e-06
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	1e-05
TIGR00099	256	TIGR00099, Cof-subfamily, Cof subfamily of IIB sub	0.001

>gnl|CDD|178043 PLN02423, PLN02423, phosphomannomutase

 Score =  520 bits (1340), Expect = 0.0
 Identities = 221/245 (90%), Positives = 240/245 (97%)

Query: 1   MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT 60
           MAARK G++ALFDVDGTLTAPRK ATP+MLEFM+ELRKVVTVGVVGGSDLSKISEQLGKT
Sbjct: 1   MAARKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKT 60

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           VI++YDYVFSENGLVAHKDGKLIGTQSLKSFLG +KLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLT+SIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240
           FDVFPQGWDKTYCL++L+DF+EIHFFGDKTY+GGNDHEIFESERT+GHTVTSP+DT E+C
Sbjct: 181 FDVFPQGWDKTYCLQFLEDFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQC 240

Query: 241 KALFL 245
            ALFL
Sbjct: 241 TALFL 245

Length = 245

>gnl|CDD|240305 PTZ00174, PTZ00174, phosphomannomutase; Provisional

 Score =  425 bits (1094), Expect = e-153
 Identities = 159/241 (65%), Positives = 199/241 (82%), Gaps = 2/241 (0%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELR-KVVTVGVVGGSDLSKISEQLGKTVIDEYDY 67
           + LFDVDGTLT PR   T +M + + +L+ K   +GVVGGSD  KI EQLG+ V++++DY
Sbjct: 7   ILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDY 66

Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM 127
           VFSENGLVA+KDG+L  +QS+  FLG EKLK+FINF L YIADLDIP+KRGTFIE+R+GM
Sbjct: 67  VFSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGM 126

Query: 128 LNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187
           +NISPIGRNCSQEERDEFE+YDK H+IR K +  L+++F+ L L FSIGGQISFDVFP+G
Sbjct: 127 INISPIGRNCSQEERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKG 186

Query: 188 WDKTYCLRYL-DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA 246
           WDKTYCLR+L +DF EIHFFGDKT++GGND+EI+   RT+GH+V +PEDT++  K LFL 
Sbjct: 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFLK 246

Query: 247 K 247
           K
Sbjct: 247 K 247

Length = 247

>gnl|CDD|202597 pfam03332, PMM, Eukaryotic phosphomannomutase

 Score =  387 bits (995), Expect = e-138
 Identities = 147/217 (67%), Positives = 180/217 (82%), Gaps = 2/217 (0%)

Query: 30  LEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLK 89
            +F+++LRK VT+GVVGGSDL KI EQLG  V+DE+DYVFSENGLVA+K GKL+ +QS+ 
Sbjct: 1   KDFLQKLRKRVTIGVVGGSDLEKIQEQLGDNVLDEFDYVFSENGLVAYKGGKLLASQSII 60

Query: 90  SFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYD 149
           + LG EKL++ INF L YIADLD+PIKRGTFIEFR+GM+N+SPIGRNCSQEER+EFE YD
Sbjct: 61  NHLGEEKLQKLINFCLRYIADLDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEEYD 120

Query: 150 KIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFG 207
           K H IR K V  L+E+FA   LTFSIGGQISFDVFP+GWDKTYCL++++   F+ IHFFG
Sbjct: 121 KKHKIRQKFVEALKEEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHVEKDGFDTIHFFG 180

Query: 208 DKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
           DKTY GGND+EIF   RT+GH+VTSP+DT+   + L 
Sbjct: 181 DKTYPGGNDYEIFNDPRTIGHSVTSPDDTVRILEELL 217

This enzyme EC:5.4.2.8 is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions. Length = 219

>gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]

 Score =  102 bits (256), Expect = 3e-26
 Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 21/246 (8%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELR-KVVTVGVVGGSDLSKISEQLGKTVIDEYDY 67
           L  FD+DGTL    K  +P+  E +  LR K V V +  G  L  +   L +  +D    
Sbjct: 5   LLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLD--GP 62

Query: 68  VFSENGLVAHKDGKLIGTQSLKS-----FLGGEKLKEFINFTLHYIADLDIPIKRGTFIE 122
           + + NG + +  G+L+  + L        L   +  + I   L+    + +  KRGTF E
Sbjct: 63  LITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAE 122

Query: 123 FRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFD 182
            R G  N+SP+GR  ++ E ++    DK H I  ++V  LR++F  L LT S  G IS D
Sbjct: 123 ARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLD 182

Query: 183 VFPQGWDKTYCLRYL-----DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTM 237
           + P+G  K Y L+ L         E+  FGD      ND E+ E     G  V +  +  
Sbjct: 183 ITPKGVSKGYALQRLAKLLGIKLEEVIAFGD----STNDIEMLE---VAGLGV-AMGNAD 234

Query: 238 EKCKAL 243
           E+ K L
Sbjct: 235 EELKEL 240

Length = 264

>gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB

 Score = 89.0 bits (221), Expect = 1e-21
 Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 33/221 (14%)

Query: 9   LALFDVDGTLTAPRKA-ATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYD 66
           L  FD+DGTL  P     +P+ +E +  LR+  V V +V G  L++I E L +  +    
Sbjct: 1   LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPL---- 56

Query: 67  YVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG 126
            + +ENG +    G+++  +    F     +KE I   L  +++       GTFIE ++ 
Sbjct: 57  PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSE----HYVGTFIEDKAI 112

Query: 127 MLNISPIGRNCSQE-ERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP 185
            + I  +G    QE +    ER +KI                 L L     G+   +V P
Sbjct: 113 AVAIHYVGAELGQELDSKMRERLEKI-------------GRNDLELEAIYVGKTDLEVLP 159

Query: 186 QGWDKTYCLRYLDDF-----NEIHFFGDKTYKGGNDHEIFE 221
            G DK   L+ L        +EI  FGD     GND E+FE
Sbjct: 160 AGVDKGSALQALLKELNGKRDEILAFGD----SGNDEEMFE 196

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204

>gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 50/247 (20%), Positives = 91/247 (36%), Gaps = 52/247 (21%)

Query: 12  FDVDGTLTAPRKAATPQMLEFMRELR-KVVTVGVVGG---SDLSKISEQLGKTVIDEYDY 67
            D+DGTL    K  + +  E +++L+ K + V +  G        + E+LG         
Sbjct: 3   SDLDGTLLNSDKKISERTKEAIKKLQEKGIKVVIATGRPYRGALPVLEELGLD-----LP 57

Query: 68  VFSENG-LVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG 126
           V   NG  +  ++GK++    +         KE +   + Y+ + ++ I     +    G
Sbjct: 58  VICYNGAYIYDENGKILYKNPIS--------KEDVKEIIEYLKENNLSI----LLYTDDG 105

Query: 127 MLNISPIGRNCSQEERDEFERYDKIHNI---------------RPKMVSVLREKFAHLN- 170
              ++ +     +EER        I +                 P+ +  L ++   L  
Sbjct: 106 AYILNDVSEKIVREERYVKSFVLVIDDFELLEDEDINKILIVTDPEDLDELEKELKELFG 165

Query: 171 --LTFSIGGQISFDVFPQGWDKTYCLRYLD-----DFNEIHFFGDKTYKGGNDHEIFESE 223
             +T +  G    ++ P+G  K   L+ L      D  E+  FGD    G ND E+ E  
Sbjct: 166 SLITITSSGPGYLEIMPKGVSKGTALKALAKHLGIDLEEVIAFGD----GENDIEMLEL- 220

Query: 224 RTVGHTV 230
              G  V
Sbjct: 221 --AGLGV 225

This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 9  LALFDVDGTLTAPRKAAT--------PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59
            LFD+DGTL                P + E ++EL++  + + +       ++ E L +
Sbjct: 1  AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE 60

Query: 60 TVIDEY-DYVFSENGLVAHKDGKLIGTQSLKSFLG 93
            +D+Y D V + NG   +   + +        +G
Sbjct: 61 LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIG 95

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 51/248 (20%)

Query: 12  FDVDGTLTAPRKAATPQMLEFMRELR-KVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFS 70
            D+DGTL       +P   E + +LR K + V +  G    ++   L +  +D   ++ +
Sbjct: 4   IDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTP-FITA 62

Query: 71  ENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLD------------------ 112
               V    G+++  + L   L  E L       L  I   D                  
Sbjct: 63  NGAAVIDDQGEILYKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKK 122

Query: 113 ----IPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAH 168
                 ++          +L I  +      E+ D     + ++ +         E   +
Sbjct: 123 FLGEPKLEVVDIQYLPDDILKILLL--FLDPEDLDLL--IEALNKL---------ELEEN 169

Query: 169 LNLTFSIGGQISFDVFPQGWDKTYCLRYLD-----DFNEIHFFGDKTYKGGNDHEIFESE 223
           +++  S  G  S ++  +G  K   L+ L         ++  FGD    G ND E+ E+ 
Sbjct: 170 VSVVSS--GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGD----GMNDIEMLEA- 222

Query: 224 RTVGHTVT 231
              G+ V 
Sbjct: 223 --AGYGVA 228

This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	248
PTZ00174	247	phosphomannomutase; Provisional	100.0
PLN02423	245	phosphomannomutase	100.0
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	100.0
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	100.0
PRK10513	270	sugar phosphate phosphatase; Provisional	100.0
PRK10976	266	putative hydrolase; Provisional	100.0
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	100.0
PLN02887	580	hydrolase family protein	100.0
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	100.0
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	100.0
PF03332	220	PMM: Eukaryotic phosphomannomutase; InterPro: IPR0	100.0
PRK01158	230	phosphoglycolate phosphatase; Provisional	100.0
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	100.0
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	100.0
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	100.0
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.97
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.97
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.97
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.96
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	99.96
PLN02382	413	probable sucrose-phosphatase	99.96
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	99.96
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.95
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	99.94
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	99.94
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	99.94
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	99.93
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.91
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	99.9
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.89
PLN02580	384	trehalose-phosphatase	99.87
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.85
PLN03017	366	trehalose-phosphatase	99.84
PLN02151	354	trehalose-phosphatase	99.79
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	99.78
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	99.73
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.68
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.68
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	99.61
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.48
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.41
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.41
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.39
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	99.35
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	99.28
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	99.25
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	99.03
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.0
KOG1050	732	consensus Trehalose-6-phosphate synthase component	98.98
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.97
PRK13288	214	pyrophosphatase PpaX; Provisional	98.94
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.91
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.82
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.76
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.7
PRK13223	272	phosphoglycolate phosphatase; Provisional	98.7
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	98.7
PRK13222	226	phosphoglycolate phosphatase; Provisional	98.68
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.67
PRK13226	229	phosphoglycolate phosphatase; Provisional	98.67
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.66
COG0546	220	Gph Predicted phosphatases [General function predi	98.64
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	98.6
PRK13225	273	phosphoglycolate phosphatase; Provisional	98.58
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	98.56
PRK11590	211	hypothetical protein; Provisional	98.54
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.53
PRK11587	218	putative phosphatase; Provisional	98.53
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	98.49
PRK10671	834	copA copper exporting ATPase; Provisional	98.48
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	98.47
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	98.47
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	98.46
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.35
PLN02954	224	phosphoserine phosphatase	98.33
PLN02575	381	haloacid dehalogenase-like hydrolase	98.33
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	98.3
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.26
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	98.24
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.22
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	98.21
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.21
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.17
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	98.17
PRK10444	248	UMP phosphatase; Provisional	98.16
PLN02645	311	phosphoglycolate phosphatase	98.15
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.11
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	98.08
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.02
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.0
PLN02940	382	riboflavin kinase	98.0
PRK08238	479	hypothetical protein; Validated	97.96
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	97.95
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.94
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	97.94
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	97.93
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	97.81
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	97.74
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	97.72
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	97.7
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	97.65
PHA02597	197	30.2 hypothetical protein; Provisional	97.65
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	97.57
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.54
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.5
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	97.49
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	97.47
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.44
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.43
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.41
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.37
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	97.34
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	97.32
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.28
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	97.28
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	97.23
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.23
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.21
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	97.2
PHA02530	300	pseT polynucleotide kinase; Provisional	97.17
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	97.13
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	97.12
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	97.11
PTZ00445	219	p36-lilke protein; Provisional	97.11
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.07
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	97.07
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	97.06
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.06
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.05
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	97.02
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.01
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	96.99
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	96.98
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	96.95
PRK06769	173	hypothetical protein; Validated	96.93
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	96.93
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	96.92
PRK01122	679	potassium-transporting ATPase subunit B; Provision	96.89
COG4087	152	Soluble P-type ATPase [General function prediction	96.88
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	96.85
PRK15122	903	magnesium-transporting ATPase; Provisional	96.82
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	96.81
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	96.81
PRK14010	673	potassium-transporting ATPase subunit B; Provision	96.75
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	96.69
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	96.66
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	96.59
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	96.58
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	96.48
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	96.4
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	96.35
PRK10748	238	flavin mononucleotide phosphatase; Provisional	96.34
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.32
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	96.31
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	96.29
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	96.14
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	96.11
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.1
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	96.05
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	96.04
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	95.87
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	95.86
PRK10563	221	6-phosphogluconate phosphatase; Provisional	95.83
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	95.81
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	95.73
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	95.72
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	95.66
PRK09449	224	dUMP phosphatase; Provisional	95.32
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	95.28
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	95.27
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	95.12
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	95.08
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	94.89
PLN03190	1178	aminophospholipid translocase; Provisional	94.7
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	94.61
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	94.55
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	94.48
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	94.47
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	94.06
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	93.74
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	93.68
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	93.61
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	93.28
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	93.22
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	92.9
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	92.73
COG4359	220	Uncharacterized conserved protein [Function unknow	92.68
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	92.43
KOG0206	1151	consensus P-type ATPase [General function predicti	92.27
COG4996	164	Predicted phosphatase [General function prediction	91.76
PLN02811	220	hydrolase	91.53
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	91.41
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	91.2
COG3700	237	AphA Acid phosphatase (class B) [General function	90.81
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	90.73
KOG2116	738	consensus Protein involved in plasmid maintenance/	90.59
COG4087	152	Soluble P-type ATPase [General function prediction	90.59
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	90.5
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	90.0
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	89.17
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	89.16
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	88.95
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	88.4
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	87.8
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	87.68
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	87.61
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	87.43
COG4030	315	Uncharacterized protein conserved in archaea [Func	87.4
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	87.0
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	86.95
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	86.78
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	86.5
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	86.09
PLN02177	497	glycerol-3-phosphate acyltransferase	85.93
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	85.76
PRK06769	173	hypothetical protein; Validated	85.73
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	84.84
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	84.8
COG4359	220	Uncharacterized conserved protein [Function unknow	84.61
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	84.28
PRK10444	248	UMP phosphatase; Provisional	84.0
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	83.07
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	82.65
COG2503	274	Predicted secreted acid phosphatase [General funct	82.4
PHA02530	300	pseT polynucleotide kinase; Provisional	82.18
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	82.06
PLN02499	498	glycerol-3-phosphate acyltransferase	81.85
PLN02645	311	phosphoglycolate phosphatase	80.41

>PTZ00174 phosphomannomutase; Provisional

Probab=100.00  E-value=3.7e-41  Score=280.33  Aligned_cols=244  Identities=64%  Similarity=1.111  Sum_probs=179.5

Q ss_pred             cccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcE
Q 038498            4 RKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKL   82 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~   82 (248)
                      ++++|+|++||||||+++++.++++++++|++++++ +.|++||||++..+.+.++......++++|+.||+.++++++.
T Consensus         2 ~~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~   81 (247)
T PTZ00174          2 EMKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGEL   81 (247)
T ss_pred             CCCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeE
Confidence            357899999999999999999999999999999999 9999999999999988887421123458999999999988888


Q ss_pred             EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHH
Q 038498           83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVL  162 (248)
Q Consensus        83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  162 (248)
                      ++...++..++.+.+.++++.+.++.....+....+.|........++.+............+..+.......+++.+.+
T Consensus        82 i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  161 (247)
T PTZ00174         82 FHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQDL  161 (247)
T ss_pred             EEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHHHH
Confidence            98888754467788999998887653222222233444433221222222211111111111211211122334566677


Q ss_pred             HHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498          163 REKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK  241 (248)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A  241 (248)
                      .+.++++.+.++.+++.++||+|+++|||.||++|++ .++++||||+++.+.||++||+.+++.|++|+||+|.+|.+|
T Consensus       162 ~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~  241 (247)
T PTZ00174        162 KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILK  241 (247)
T ss_pred             HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHH
Confidence            7777766666665456899999999999999999998 899999999666668999999988667899999999999999


Q ss_pred             hhhccC
Q 038498          242 ALFLAK  247 (248)
Q Consensus       242 ~~v~~~  247 (248)
                      +.++++
T Consensus       242 ~~~~~~  247 (247)
T PTZ00174        242 ELFLKK  247 (247)
T ss_pred             HHhcCC
Confidence            999875

>PLN02423 phosphomannomutase

Probab=100.00  E-value=1.4e-38  Score=264.07  Aligned_cols=243  Identities=90%  Similarity=1.425  Sum_probs=190.9

Q ss_pred             CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498            1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG   80 (248)
Q Consensus         1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~   80 (248)
                      ||.|+...+++|||||||+++++.+++++.++|++|++++.|++||||++..+.+.++..+...+.++|+.||+.++.++
T Consensus         1 ~~~~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g   80 (245)
T PLN02423          1 MAARKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG   80 (245)
T ss_pred             CCCCccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence            78886666777999999999999999999999999995599999999999999888886312223489999999999989


Q ss_pred             cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHH
Q 038498           81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVS  160 (248)
Q Consensus        81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (248)
                      +.++...++..++.+.++++++.++.+.....+...++.|.+++....++..++..+.....+++..+..+.+..++...
T Consensus        81 ~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~  160 (245)
T PLN02423         81 KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVS  160 (245)
T ss_pred             EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHHH
Confidence            99998777656788999999999988654444444556676655544444444434432333233344444444556677


Q ss_pred             HHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHH
Q 038498          161 VLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC  240 (248)
Q Consensus       161 ~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~  240 (248)
                      .+.++++++.+..+.+|..++||+|+++|||.||+.|+.+++++||||+++.+.||++||+..|+.+++|.++.+....+
T Consensus       161 ~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~  240 (245)
T PLN02423        161 VLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLEDFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQC  240 (245)
T ss_pred             HHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhcCcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHH
Confidence            88888887778777667799999999999999999999999999999988888999999998667999999999888776


Q ss_pred             hhh
Q 038498          241 KAL  243 (248)
Q Consensus       241 A~~  243 (248)
                      ...
T Consensus       241 ~~~  243 (245)
T PLN02423        241 TAL  243 (245)
T ss_pred             HHh
Confidence            543

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=100.00  E-value=1.5e-38  Score=267.39  Aligned_cols=232  Identities=25%  Similarity=0.394  Sum_probs=165.1

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      +.+|+|+|||||||+++++.++++++++|++++++ +.|+++|||++..+.+.+...  ....++|++||+++++.++.+
T Consensus         1 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l--~~~~~~I~~NGa~i~~~~~~i   78 (264)
T COG0561           1 MMIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEEL--GLDGPLITFNGALIYNGGELL   78 (264)
T ss_pred             CCeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc--CCCccEEEeCCeEEecCCcEE
Confidence            36899999999999999999999999999999999 999999999998777666541  112289999999999999999


Q ss_pred             EEeecccccchHHHHHHHHHHHHhhccccccc-cccccceeccc-----cceecccCCCC-Chhhhhh--hhhccccccc
Q 038498           84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPI-KRGTFIEFRSG-----MLNISPIGRNC-SQEERDE--FERYDKIHNI  154 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~  154 (248)
                      +..++    +.+.+.++++.+.+......... ..+.+......     .....+..... .......  +..+......
T Consensus        79 ~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (264)
T COG0561          79 FQKPL----SREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEI  154 (264)
T ss_pred             eeecC----CHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHh
Confidence            99987    57889999988866422111111 11111111110     00000000000 0000000  0011112234


Q ss_pred             hHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          155 RPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      .++....+.+.++.....++.+.+..+||+|+++|||.|+++|++     .++++||||    +.||++||+.+| ++||
T Consensus       155 ~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD----~~ND~~Ml~~ag-~gva  229 (264)
T COG0561         155 LEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGD----STNDIEMLEVAG-LGVA  229 (264)
T ss_pred             HHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCC----ccccHHHHHhcC-eeee
Confidence            556666777777644455555456669999999999999999997     678999999    999999999999 9999


Q ss_pred             ccCchhhHHHHhhhhccC
Q 038498          230 VTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       230 v~Na~~~~k~~A~~v~~~  247 (248)
                      |+||++++|++|++++.+
T Consensus       230 m~Na~~~~k~~A~~vt~~  247 (264)
T COG0561         230 MGNADEELKELADYVTTS  247 (264)
T ss_pred             ccCCCHHHHhhCCcccCC
Confidence            999999999999988754

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=100.00  E-value=4.7e-39  Score=247.37  Aligned_cols=242  Identities=67%  Similarity=1.141  Sum_probs=226.9

Q ss_pred             cccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCc
Q 038498            2 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGK   81 (248)
Q Consensus         2 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~   81 (248)
                      +.|+...|+.||.||||...+..+++++.+.|++|++.+.+.++-|..++-+.++++..+...+||+..+||..-|.+|+
T Consensus         6 ~~r~~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~yk~gk   85 (252)
T KOG3189|consen    6 AARDEETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAYKGGK   85 (252)
T ss_pred             hhcCCceEEEEecCCccccccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEeeCCc
Confidence            45566689999999999999999999999999998877999999999999999999887788899999999999999999


Q ss_pred             EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHH
Q 038498           82 LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSV  161 (248)
Q Consensus        82 ~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (248)
                      .+..+.+-..+..+.++++++++.+|..++.+|.++|.|+++|++|+|++|+++.++++++..|..+|+.+.+++.+++.
T Consensus        86 ~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR~K~v~~  165 (252)
T KOG3189|consen   86 LLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIREKFVEA  165 (252)
T ss_pred             chhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhHHHHHHH
Confidence            99888887778889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498          162 LREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK  239 (248)
Q Consensus       162 l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~  239 (248)
                      |+++|+++.+.+|.||..++|++|+||+|..+++++-+  .+.+.+|||++.+++||.++|..-.+.|..|.|+.|.++.
T Consensus       166 Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~dgf~~IhFFGDkT~~GGNDyEIf~dprtiGhsV~~PdDT~~~  245 (252)
T KOG3189|consen  166 LREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKDGFDTIHFFGDKTMPGGNDYEIFADPRTIGHSVTSPDDTVRI  245 (252)
T ss_pred             HHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhcCCceEEEeccccCCCCCcceeeeCCccccccccCchHHHHH
Confidence            99999999999999999999999999999999999997  8899999999999999999999887899999999999887


Q ss_pred             Hhhh
Q 038498          240 CKAL  243 (248)
Q Consensus       240 ~A~~  243 (248)
                      +...
T Consensus       246 ~~~i  249 (252)
T KOG3189|consen  246 CEEI  249 (252)
T ss_pred             HHHH
Confidence            7553

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=100.00  E-value=3.1e-38  Score=266.20  Aligned_cols=231  Identities=16%  Similarity=0.225  Sum_probs=157.7

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe--CCc
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--DGK   81 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--~~~   81 (248)
                      ++|+|++||||||+++++.++++++++|++++++ +.|++||||++..+.+.+... +....+++|+.||+.+++  +++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~   81 (270)
T PRK10513          2 AIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGE   81 (270)
T ss_pred             ceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCC
Confidence            5899999999999999889999999999999999 999999999999876655541 111125899999999996  678


Q ss_pred             EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccc----eecc-cCCCCC-hhhhhhhhhcccc---
Q 038498           82 LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GML----NISP-IGRNCS-QEERDEFERYDKI---  151 (248)
Q Consensus        82 ~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~-~~~~~~-~~~~~~~~~~~~~---  151 (248)
                      .++...++    .+.++++++.++++.....+....+.|..... ...    .... ...... .........+.++   
T Consensus        82 ~i~~~~l~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  157 (270)
T PRK10513         82 TVAQTALS----YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMI  157 (270)
T ss_pred             EEEecCCC----HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEe
Confidence            88888774    78888888887764222111111112221100 000    0000 000000 0000000000110   


Q ss_pred             c--cchHHHHHHHHHHc-CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          152 H--NIRPKMVSVLREKF-AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       152 ~--~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      .  ...+.+...+.+.+ ..+.+..+  ++.++||+|+++|||.||++|++     ++++++|||    +.||++||+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD----~~NDi~Ml~~a  231 (270)
T PRK10513        158 DEPEILDAAIARIPAEVKERYTVLKS--APYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGD----QENDIAMIEYA  231 (270)
T ss_pred             CCHHHHHHHHHHhHHHhcCcEEEEEe--cCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECC----chhhHHHHHhC
Confidence            0  11223333444444 23444444  56899999999999999999997     789999999    99999999999


Q ss_pred             CCceEEccCchhhHHHHhhhhccC
Q 038498          224 RTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       224 g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      | +|+||+||+|++|++|++|+++
T Consensus       232 g-~~vAm~NA~~~vK~~A~~vt~~  254 (270)
T PRK10513        232 G-VGVAMGNAIPSVKEVAQFVTKS  254 (270)
T ss_pred             C-ceEEecCccHHHHHhcCeeccC
Confidence            9 9999999999999999999853

>PRK10976 putative hydrolase; Provisional

Probab=100.00  E-value=6.7e-38  Score=263.65  Aligned_cols=227  Identities=16%  Similarity=0.224  Sum_probs=156.6

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIG   84 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~   84 (248)
                      +|+|++||||||+++++.++++++++|++++++ ++|++||||++..+.+.+.. +.. ..++||.||+.+++ +++.++
T Consensus         2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~-~~~~I~~NGa~i~~~~~~~i~   79 (266)
T PRK10976          2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDN-LEI-KSYMITSNGARVHDTDGNLIF   79 (266)
T ss_pred             ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCC-CCeEEEcCCcEEECCCCCEeh
Confidence            699999999999999889999999999999999 99999999999987766554 111 24789999999997 778888


Q ss_pred             EeecccccchHHHHHHHHHHHHhhc-cccccccccccceecccc-ceecc-c--C-CCCChhh--hhhhhhcccc---cc
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIA-DLDIPIKRGTFIEFRSGM-LNISP-I--G-RNCSQEE--RDEFERYDKI---HN  153 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~-~--~-~~~~~~~--~~~~~~~~~~---~~  153 (248)
                      ...+    +.+.+.++++.+.+... ...+....+.|....... ..+.. .  . .......  ...+..+-..   .+
T Consensus        80 ~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~  155 (266)
T PRK10976         80 SHNL----DRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHE  155 (266)
T ss_pred             hhcC----CHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHH
Confidence            7776    47888989888765311 111111122222110000 00000 0  0 0000000  0000000000   11


Q ss_pred             chHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498          154 IRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVG  227 (248)
Q Consensus       154 ~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~  227 (248)
                      ..+.+.+.+.+.++ ++.+..+  ++.++||+|+++|||.||++|++     ++++++|||    +.||++||+.+| +|
T Consensus       156 ~~~~~~~~l~~~~~~~~~~~~s--~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD----~~NDi~Ml~~ag-~~  228 (266)
T PRK10976        156 KLLPLEQAINARWGDRVNVSFS--TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGD----GMNDAEMLSMAG-KG  228 (266)
T ss_pred             HHHHHHHHHHHHhCCcEEEEEe--CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcC----CcccHHHHHHcC-CC
Confidence            22334455666554 4555555  56899999999999999999997     789999999    999999999999 99


Q ss_pred             EEccCchhhHHHHhh--hhcc
Q 038498          228 HTVTSPEDTMEKCKA--LFLA  246 (248)
Q Consensus       228 ~av~Na~~~~k~~A~--~v~~  246 (248)
                      +||+||++++|++|+  +|++
T Consensus       229 vAm~NA~~~vK~~A~~~~v~~  249 (266)
T PRK10976        229 CIMGNAHQRLKDLLPELEVIG  249 (266)
T ss_pred             eeecCCcHHHHHhCCCCeecc
Confidence            999999999999987  6774

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=100.00  E-value=9.2e-38  Score=263.65  Aligned_cols=227  Identities=22%  Similarity=0.285  Sum_probs=157.5

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIG   84 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~   84 (248)
                      +|+|++||||||+++++.|+++++++|++|+++ +.|++||||++..+.+.+.. +.. ..++|++||+.+++ +++.++
T Consensus         2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~-~~~~I~~NGa~I~~~~~~~l~   79 (272)
T PRK15126          2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSL-DAYLITGNGTRVHSLEGELLH   79 (272)
T ss_pred             ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCC-CCcEEecCCcEEEcCCCCEEE
Confidence            699999999999999889999999999999999 99999999999987766654 111 24789999999996 778888


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccc---eeccc-CCCCChhhh--hhhhhccc--cccch
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GML---NISPI-GRNCSQEER--DEFERYDK--IHNIR  155 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~-~~~~~~~~~--~~~~~~~~--~~~~~  155 (248)
                      ...+    +.+.++++++.+++......+....+.|..... ...   ..... .........  ..+..+-.  ..+..
T Consensus        80 ~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~  155 (272)
T PRK15126         80 RQDL----PADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDL  155 (272)
T ss_pred             eecC----CHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHH
Confidence            8877    478899999887765222111111122211100 000   00000 000000000  00000000  01122


Q ss_pred             HHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          156 PKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       156 ~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      +++...+.+.++ .+.+..+  +..++||+|+++|||.||++|++     .+++++|||    +.||++||+.+| +|+|
T Consensus       156 ~~~~~~l~~~~~~~~~~~~s--~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD----~~NDi~Ml~~ag-~~vA  228 (272)
T PRK15126        156 TRLQIQLNEALGERAHLCFS--ATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGD----AMNDREMLGSVG-RGFI  228 (272)
T ss_pred             HHHHHHHHHHhcCCEEEEEc--CCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecC----CHHHHHHHHHcC-Ccee
Confidence            344455655554 3445444  46799999999999999999997     789999999    999999999999 9999


Q ss_pred             ccCchhhHHHHhhh--hcc
Q 038498          230 VTSPEDTMEKCKAL--FLA  246 (248)
Q Consensus       230 v~Na~~~~k~~A~~--v~~  246 (248)
                      |+||++++|++|++  |+.
T Consensus       229 m~Na~~~vK~~A~~~~v~~  247 (272)
T PRK15126        229 MGNAMPQLRAELPHLPVIG  247 (272)
T ss_pred             ccCChHHHHHhCCCCeecC
Confidence            99999999999986  653

>PLN02887 hydrolase family protein

Probab=100.00  E-value=4e-36  Score=273.50  Aligned_cols=231  Identities=16%  Similarity=0.180  Sum_probs=158.3

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccC-CC-------ceEEecCCcE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVID-EY-------DYVFSENGLV   75 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~-~~-------~~~i~~nGa~   75 (248)
                      .++|+|+|||||||+++++.|+++++++|++++++ +.|++||||++..+.+.+.. +.. ..       .++|+.||+.
T Consensus       306 ~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~~~~~~I~~~~p~I~~NGA~  384 (580)
T PLN02887        306 PKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKM-VDLAGKDGIISESSPGVFLQGLL  384 (580)
T ss_pred             cCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcccccceEeecccEEeecCeE
Confidence            57899999999999999899999999999999999 99999999999877655443 111 11       2577889999


Q ss_pred             EEe-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccce-ecc-cC-CCCC-hhhhhhhh---h
Q 038498           76 AHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN-ISP-IG-RNCS-QEERDEFE---R  147 (248)
Q Consensus        76 i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~-~~~~~~~~---~  147 (248)
                      |++ +++.++...+    +.+.+.++++.+.++.....+....+.|......... ... .. .... ......+.   .
T Consensus       385 I~d~~g~~I~~~~L----~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~  460 (580)
T PLN02887        385 VYGRQGREIYRSNL----DQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAAD  460 (580)
T ss_pred             EEECCCcEEEEEeC----CHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccC
Confidence            997 7788888877    4788999998887653221111112222211100000 000 00 0000 00000010   0


Q ss_pred             cccc--cc----chHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCC
Q 038498          148 YDKI--HN----IRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGN  215 (248)
Q Consensus       148 ~~~~--~~----~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~N  215 (248)
                      +.++  ..    ..+.+...+.+.+. .+.+..+  ++.++||+|+++|||.||++|++     .++++||||    +.|
T Consensus       461 i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S--~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGD----s~N  534 (580)
T PLN02887        461 IQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQA--QPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGD----GEN  534 (580)
T ss_pred             eeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEe--cCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEec----chh
Confidence            0011  00    11223344555553 3445544  56899999999999999999997     779999999    999


Q ss_pred             CHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          216 DHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       216 Di~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      |++||+.+| +||||+||++++|++|++|+++
T Consensus       535 DIeMLe~AG-~gVAMgNA~eeVK~~Ad~VT~s  565 (580)
T PLN02887        535 DIEMLQLAS-LGVALSNGAEKTKAVADVIGVS  565 (580)
T ss_pred             hHHHHHHCC-CEEEeCCCCHHHHHhCCEEeCC
Confidence            999999999 9999999999999999999853

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=100.00  E-value=9.5e-36  Score=247.02  Aligned_cols=225  Identities=19%  Similarity=0.286  Sum_probs=160.9

Q ss_pred             EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEEEee
Q 038498           10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIGTQS   87 (248)
Q Consensus        10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~~~~   87 (248)
                      |+|||||||+++++.|+++++++|++|+++ +.++++|||++..+.+.+...  ...+++|+.||+.+.. +++.++...
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~--~~~~~~I~~nGa~i~~~~~~~l~~~~   78 (254)
T PF08282_consen    1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL--GIDDYFICSNGALIDDPKGKILYEKP   78 (254)
T ss_dssp             EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT--THCSEEEEGGGTEEEETTTEEEEEES
T ss_pred             cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccc--cchhhhcccccceeeecccccchhhh
Confidence            799999999999999999999999999999 999999999999877766641  1125999999999944 889999998


Q ss_pred             cccccchHHHHHHHHHHHHhhccccccccccccceeccc-c-c---eecccCC-CCChhhhh---hhhh--ccccccchH
Q 038498           88 LKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG-M-L---NISPIGR-NCSQEERD---EFER--YDKIHNIRP  156 (248)
Q Consensus        88 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---~~~~~~~-~~~~~~~~---~~~~--~~~~~~~~~  156 (248)
                      +    +.+.++.+++.+..+.....+......|...... . .   ....... ........   .+..  +....+..+
T Consensus        79 i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~  154 (254)
T PF08282_consen   79 I----DSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLE  154 (254)
T ss_dssp             B-----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHH
T ss_pred             e----eccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhh
Confidence            7    4789999999999875222221112222211100 0 0   0000000 00000000   0000  111122345


Q ss_pred             HHHHHHHHHcCCc-eEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          157 KMVSVLREKFAHL-NLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       157 ~~~~~l~~~~~~~-~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      .+.+.+.+.+++. .+..+  +..++||+|+++||+.|+++|++     ++++++|||    +.||++||+.+| +++||
T Consensus       155 ~l~~~l~~~~~~~~~~~~~--~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD----~~ND~~Ml~~~~-~~~am  227 (254)
T PF08282_consen  155 QLREELKKKFPNLIDVVRS--SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGD----SENDIEMLELAG-YSVAM  227 (254)
T ss_dssp             HHHHHHHHHHTTTEEEEEE--ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEES----SGGGHHHHHHSS-EEEEE
T ss_pred             hhhhhhccccCcceeEEEe--cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeec----ccccHhHHhhcC-eEEEE
Confidence            5667788888753 34444  57899999999999999999997     789999999    999999999999 99999


Q ss_pred             cCchhhHHHHhhhhccC
Q 038498          231 TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~~~  247 (248)
                      +||++++|++|++|+..
T Consensus       228 ~na~~~~k~~a~~i~~~  244 (254)
T PF08282_consen  228 GNATPELKKAADYITPS  244 (254)
T ss_dssp             TTS-HHHHHHSSEEESS
T ss_pred             cCCCHHHHHhCCEEecC
Confidence            99999999999999853

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=100.00  E-value=5.7e-35  Score=246.36  Aligned_cols=228  Identities=18%  Similarity=0.237  Sum_probs=156.1

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe--CCcE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK--DGKL   82 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~--~~~~   82 (248)
                      ++|+|+|||||||+++++.++++++++|++++++ +.|++||||++..+.+.+.. +... .++|+.||+.+++  +++.
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~-~~~I~~NGa~i~d~~~~~~   79 (272)
T PRK10530          2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALD-TPAICCNGTYLYDYQAKKV   79 (272)
T ss_pred             CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCC-CCEEEcCCcEEEecCCCEE
Confidence            5799999999999999889999999999999999 99999999999887666554 1111 3799999999997  5688


Q ss_pred             EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccc----cc----eec----ccCCCCC-hhh--h--hhh
Q 038498           83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG----ML----NIS----PIGRNCS-QEE--R--DEF  145 (248)
Q Consensus        83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~----~~~~~~~-~~~--~--~~~  145 (248)
                      ++...+    +.+.+.++++.+++......+....+.|......    ..    ...    +...... ...  .  ...
T Consensus        80 l~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
T PRK10530         80 LEADPL----PVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAI  155 (272)
T ss_pred             EEecCC----CHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCc
Confidence            888876    5789999999887752211111111111110000    00    000    0000000 000  0  000


Q ss_pred             hhccccc---cchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCH
Q 038498          146 ERYDKIH---NIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDH  217 (248)
Q Consensus       146 ~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi  217 (248)
                      ..+-...   ...+.+.+.+.+.+. +.+..+  ...++|++|++++|+.|++++++     ++++++|||    +.||+
T Consensus       156 ~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s--~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD----~~NDi  228 (272)
T PRK10530        156 WKFALTHEDLPQLQHFAKHVEHELG-LECEWS--WHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGD----NFNDI  228 (272)
T ss_pred             EEEEEecCCHHHHHHHHHHHhhhcC-ceEEEe--cCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCC----ChhhH
Confidence            0000000   112334445555543 334444  34689999999999999999997     779999999    99999


Q ss_pred             HHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          218 EIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       218 ~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +|++.+| +++||+||.+++|+.|++|+++
T Consensus       229 ~m~~~ag-~~vamgna~~~lk~~Ad~v~~~  257 (272)
T PRK10530        229 SMLEAAG-LGVAMGNADDAVKARADLVIGD  257 (272)
T ss_pred             HHHHhcC-ceEEecCchHHHHHhCCEEEec
Confidence            9999999 9999999999999999999854

>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5

Probab=100.00  E-value=8.5e-35  Score=230.51  Aligned_cols=216  Identities=69%  Similarity=1.169  Sum_probs=182.9

Q ss_pred             HHHHHHHHhhcCeEEEEcCCChHHHHHHhc-ccccCCCceEEecCCcEEEeCCcEEEEeecccccchHHHHHHHHHHHHh
Q 038498           29 MLEFMRELRKVVTVGVVGGSDLSKISEQLG-KTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHY  107 (248)
Q Consensus        29 ~~~al~~l~~~~~v~iaTGR~~~~~~~~l~-~~~~~~~~~~i~~nGa~i~~~~~~i~~~~~~~~i~~~~~~~i~~~~~~~  107 (248)
                      +.+.|++|++.+.|++++|-.++.+.+|+. ..+...+||+.++||...|..++.+..+.+.+.++.+..+++++++++|
T Consensus         1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~~   80 (220)
T PF03332_consen    1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLRY   80 (220)
T ss_dssp             HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHHH
Confidence            467889998889999999999999999994 5455678999999999999999999888887778899999999999999


Q ss_pred             hccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCC
Q 038498          108 IADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG  187 (248)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~  187 (248)
                      ..++.+|.++|.++|+|+++++++|+++.++++++..+..+|+...+++.+++.|+++||++.+.++.||..++||+|+|
T Consensus        81 ~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~G  160 (220)
T PF03332_consen   81 ISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPKG  160 (220)
T ss_dssp             HHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEETT
T ss_pred             HHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccCC
Confidence            99999999999999999999999999999999999888888988889999999999999998899999999999999999


Q ss_pred             CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhh
Q 038498          188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF  244 (248)
Q Consensus       188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v  244 (248)
                      ++|..+|++|.+  .+++++||||+++++||.+++...++.+++|.+++|.++.+...+
T Consensus       161 wDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~~l~~l~  219 (220)
T PF03332_consen  161 WDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIKQLKELF  219 (220)
T ss_dssp             -SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHHHHHHHh
Confidence            999999999998  799999999999999999999988878999999999998876543

4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=100.00  E-value=6e-34  Score=234.55  Aligned_cols=206  Identities=19%  Similarity=0.240  Sum_probs=144.5

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC--CcE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD--GKL   82 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~--~~~   82 (248)
                      .+|+|++||||||+++++.+++++.++|++|+++ +.|++||||++..+.+.+.. + ...+++|+.||+.+++.  ++.
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l-~~~~~~i~~nGa~i~~~~~~~~   79 (230)
T PRK01158          2 KIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-I-GTSGPVIAENGGVISVGFDGKR   79 (230)
T ss_pred             ceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-h-CCCCcEEEecCeEEEEcCCCCE
Confidence            5799999999999999889999999999999999 99999999999876654433 1 11248999999999973  677


Q ss_pred             EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHH
Q 038498           83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVL  162 (248)
Q Consensus        83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  162 (248)
                      ++...+      +.+.++++.+.++......     .+......       ....      ... .. .....+.+.+.+
T Consensus        80 ~~~~~~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-------~~~~------~~~-~~-~~~~~~~~~~~l  133 (230)
T PRK01158         80 IFLGDI------EECEKAYSELKKRFPEAST-----SLTKLDPD-------YRKT------EVA-LR-RTVPVEEVRELL  133 (230)
T ss_pred             EEEcch------HHHHHHHHHHHHhccccce-----eeecCCcc-------cccc------eee-ec-ccccHHHHHHHH
Confidence            777765      2455566666553211100     01000000       0000      000 00 001122333333


Q ss_pred             HHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhH
Q 038498          163 REKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTM  237 (248)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~  237 (248)
                       ++++. .+....+ ..++|+.|+++||+.|++++++     ++++++|||    +.||++||+.+| +++||+||++++
T Consensus       134 -~~~~~-~~~~~~~-~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD----~~NDi~m~~~ag-~~vam~Na~~~v  205 (230)
T PRK01158        134 -EELGL-DLEIVDS-GFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGD----SENDLEMFEVAG-FGVAVANADEEL  205 (230)
T ss_pred             -HHcCC-cEEEEec-ceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECC----chhhHHHHHhcC-ceEEecCccHHH
Confidence             33331 2333332 3579999999999999999997     678999999    999999999999 999999999999


Q ss_pred             HHHhhhhccC
Q 038498          238 EKCKALFLAK  247 (248)
Q Consensus       238 k~~A~~v~~~  247 (248)
                      |++|++|+++
T Consensus       206 k~~a~~v~~~  215 (230)
T PRK01158        206 KEAADYVTEK  215 (230)
T ss_pred             HHhcceEecC
Confidence            9999999864

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=100.00  E-value=1.1e-33  Score=236.84  Aligned_cols=226  Identities=18%  Similarity=0.270  Sum_probs=155.9

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC-CcEEEEe
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD-GKLIGTQ   86 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~-~~~i~~~   86 (248)
                      +|+|||||||+++++.+++++.++|++|+++ +.++++|||++..+.+.+.. +.. ..++|+.||+.+++. ++.++..
T Consensus         1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~-~~~~I~~NGa~i~~~~~~~i~~~   78 (256)
T TIGR00099         1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGL-DTPFITANGAAVIDDQGEILYKK   78 (256)
T ss_pred             CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCC-CCCEEEcCCcEEECCCCCEEeec
Confidence            5899999999999889999999999999999 99999999999887776665 111 128999999999984 6888888


Q ss_pred             ecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccce-ecc-cCCC---CCh--hhh-hhhhhc--cccccch
Q 038498           87 SLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GMLN-ISP-IGRN---CSQ--EER-DEFERY--DKIHNIR  155 (248)
Q Consensus        87 ~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~~~---~~~--~~~-~~~~~~--~~~~~~~  155 (248)
                      ++    +.+.++++++.+.+......+....+.|..... .... ... ....   ...  ... ..+..+  .......
T Consensus        79 ~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (256)
T TIGR00099        79 PL----DLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDL  154 (256)
T ss_pred             CC----CHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHH
Confidence            77    478999999988875322211112222221110 0000 000 0000   000  000 000000  0000112


Q ss_pred             HHHHHHHHH-Hc-CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceE
Q 038498          156 PKMVSVLRE-KF-AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGH  228 (248)
Q Consensus       156 ~~~~~~l~~-~~-~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~  228 (248)
                      +++...+.+ .+ +.+.+..+  +..++||+|+++||+.|++++++     ++++++|||    +.||++||+.+| .++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~s--~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD----~~nD~~m~~~~~-~~~  227 (256)
T TIGR00099       155 DLLIEALNKLELEENVSVVSS--GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGD----GMNDIEMLEAAG-YGV  227 (256)
T ss_pred             HHHHHHhhhhhhcCCEEEEEe--cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCC----cHHhHHHHHhCC-cee
Confidence            233334442 23 23444444  56899999999999999999997     679999999    999999999999 999


Q ss_pred             EccCchhhHHHHhhhhccC
Q 038498          229 TVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       229 av~Na~~~~k~~A~~v~~~  247 (248)
                      ||+||++++|+.|++|+.+
T Consensus       228 a~~na~~~~k~~a~~~~~~  246 (256)
T TIGR00099       228 AMGNADEELKALADYVTDS  246 (256)
T ss_pred             EecCchHHHHHhCCEEecC
Confidence            9999999999999999864

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=100.00  E-value=5.4e-33  Score=234.42  Aligned_cols=230  Identities=13%  Similarity=0.096  Sum_probs=147.2

Q ss_pred             cccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498            2 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG   80 (248)
Q Consensus         2 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~   80 (248)
                      -.-+.+++|++||||||+++++.++++++++|++|+++ +.|++||||++..+.+.+.. +.....++|++||+.+++.+
T Consensus         2 ~~~~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~~~~~I~~NGa~I~~~~   80 (271)
T PRK03669          2 LSLQDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQGLPLIAENGAVIQLDE   80 (271)
T ss_pred             CCcCCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCCCCcEEEeCCCEEEecC
Confidence            34467899999999999998888999999999999999 99999999999887766554 11111379999999999742


Q ss_pred             --c-----EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhh--cccc
Q 038498           81 --K-----LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFER--YDKI  151 (248)
Q Consensus        81 --~-----~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  151 (248)
                        +     .++...+    +.+.+..+++.+.+.. ...+....+................... .........  +...
T Consensus        81 ~~~~~~~~~~~~~~l----~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  154 (271)
T PRK03669         81 QWQDHPDFPRIISGI----SHGEIRQVLNTLREKE-GFKFTTFDDVDDATIAEWTGLSRSQAAL-ARLHEASVTLIWRDS  154 (271)
T ss_pred             cccCCCCceEeecCC----CHHHHHHHHHHHHHhc-CCceeecccCCHHHHHHHhCCCHHHHHH-HhccccCceeEecCC
Confidence              2     2444444    6889999999887641 1111110000000000000000000000 000000000  0000


Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      .....++.+.+..  .++.+..  + ..++|++|+++|||.|+++|++        .++++||||    +.||++||+.+
T Consensus       155 ~~~~~~~~~~l~~--~~~~~~~--~-~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGD----s~NDi~Ml~~a  225 (271)
T PRK03669        155 DERMAQFTARLAE--LGLQFVQ--G-ARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGD----GPNDAPLLDVM  225 (271)
T ss_pred             HHHHHHHHHHHHH--CCCEEEe--c-CeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcC----CHHHHHHHHhC
Confidence            1112233334433  2444433  2 3689999999999999999997        368999999    99999999999


Q ss_pred             CCceEEccCch-hh-----HHHHhhhhccCC
Q 038498          224 RTVGHTVTSPE-DT-----MEKCKALFLAKP  248 (248)
Q Consensus       224 g~~~~av~Na~-~~-----~k~~A~~v~~~~  248 (248)
                      | +||||+|+. +.     ++..|++++..|
T Consensus       226 g-~gvAM~~~~~~~~~l~~~~~~~~~~~~~~  255 (271)
T PRK03669        226 D-YAVVVKGLNREGVHLQDDDPARVYRTQRE  255 (271)
T ss_pred             C-EEEEecCCCCCCcccccccCCceEeccCC
Confidence            9 999999877 32     556788888654

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=100.00  E-value=1.6e-31  Score=219.32  Aligned_cols=199  Identities=21%  Similarity=0.254  Sum_probs=136.0

Q ss_pred             EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC--cEEEEe
Q 038498           10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG--KLIGTQ   86 (248)
Q Consensus        10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~--~~i~~~   86 (248)
                      |+|||||||+++++.+++++.++|++|+++ +.+++||||++..+.+.+.. + ...+++|+.||+.+++.+  +.++..
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l-~~~~~~i~~nGa~i~~~~~~~~~~~~   78 (225)
T TIGR01482         1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-I-GTPDPVIAENGGEISYNEGMDDIFLA   78 (225)
T ss_pred             CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-h-CCCCeEEEecCcEEEeCCCCceEEec
Confidence            689999999999888999999999999999 99999999999876655543 1 224689999999999843  455555


Q ss_pred             ecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHHHc
Q 038498           87 SLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKF  166 (248)
Q Consensus        87 ~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  166 (248)
                      .++    .......+......     ..    ....      .. +  ...      ...... ..... +....+.+.+
T Consensus        79 ~~~----~~~~~~~~~~~~~~-----~~----~~~~------~~-~--~~~------~~~~~~-~~~~~-~~~~~~~~~~  128 (225)
T TIGR01482        79 YLE----EEWFLDIVIAKTFP-----FS----RLKV------QY-P--RRA------SLVKMR-YGIDV-DTVREIIKEL  128 (225)
T ss_pred             ccC----HHHHHHHHHhcccc-----hh----hhcc------cc-c--ccc------ceEEEe-ecCCH-HHHHHHHHhc
Confidence            543    33222221111000     00    0000      00 0  000      000000 00111 2223444554


Q ss_pred             CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498          167 AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK  241 (248)
Q Consensus       167 ~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A  241 (248)
                      .. .+.... +..++|++|++++|+.|++++++     ++++++|||    +.||++||+.+| +++||+||.+++|++|
T Consensus       129 ~~-~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD----~~NDi~m~~~ag-~~vam~Na~~~~k~~A  201 (225)
T TIGR01482       129 GL-NLVAVD-SGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD----SENDIDLFEVPG-FGVAVANAQPELKEWA  201 (225)
T ss_pred             Cc-eEEEec-CCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC----CHhhHHHHHhcC-ceEEcCChhHHHHHhc
Confidence            42 232222 35699999999999999999997     678999999    999999999999 9999999999999999


Q ss_pred             hhhccC
Q 038498          242 ALFLAK  247 (248)
Q Consensus       242 ~~v~~~  247 (248)
                      ++|+..
T Consensus       202 ~~vt~~  207 (225)
T TIGR01482       202 DYVTES  207 (225)
T ss_pred             CeecCC
Confidence            999864

catalyze the same reaction as SPP.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.97  E-value=6.6e-31  Score=214.50  Aligned_cols=199  Identities=20%  Similarity=0.269  Sum_probs=133.5

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGT   85 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~   85 (248)
                      +|+|++||||||+++++.+++++.++|++|+++ +.|+++|||++..+.+.+.. + ....++|++||+.+++.++.+..
T Consensus         1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l-~~~~~~i~~NGa~i~~~~~~~~~   78 (215)
T TIGR01487         1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL-I-GTSGPVVAENGGVIFYNKEDIFL   78 (215)
T ss_pred             CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH-h-CCCCcEEEccCcEEEeCCCcEEE
Confidence            589999999999999889999999999999999 99999999999887665543 1 11238999999999984443332


Q ss_pred             eecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHHH
Q 038498           86 QSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREK  165 (248)
Q Consensus        86 ~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  165 (248)
                      ....    ...+   .......    ..+.  ..+..      .+ +  ..       ... +.......+.+...+. .
T Consensus        79 ~~~~----~~~~---~~~~~~~----~~~~--~~~~~------~~-~--~~-------~~~-~~~~~~~~~~~~~~l~-~  127 (215)
T TIGR01487        79 ANME----EEWF---LDEEKKK----RFPR--DRLSN------EY-P--RA-------SLV-IMREGKDVDEVREIIK-E  127 (215)
T ss_pred             eccc----chhh---HHHhhhh----hhhh--hhccc------cc-c--ee-------EEE-EecCCccHHHHHHHHH-h
Confidence            2211    1111   1100000    0000  00000      00 0  00       000 0000111223333333 2


Q ss_pred             cCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHH
Q 038498          166 FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC  240 (248)
Q Consensus       166 ~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~  240 (248)
                       .++.+  ..+ ...+|++|.+++|+.|++++++     .+++++|||    +.||++||+.+| +++||+||.|++|++
T Consensus       128 -~~~~~--~~~-~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGD----s~ND~~ml~~ag-~~vam~na~~~~k~~  198 (215)
T TIGR01487       128 -RGLNL--VDS-GFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGD----SENDIDLFRVVG-FKVAVANADDQLKEI  198 (215)
T ss_pred             -CCeEE--Eec-CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECC----CHHHHHHHHhCC-CeEEcCCccHHHHHh
Confidence             23333  322 4689999999999999999997     568999999    999999999999 999999999999999


Q ss_pred             hhhhccC
Q 038498          241 KALFLAK  247 (248)
Q Consensus       241 A~~v~~~  247 (248)
                      |++|++.
T Consensus       199 A~~v~~~  205 (215)
T TIGR01487       199 ADYVTSN  205 (215)
T ss_pred             CCEEcCC
Confidence            9999853

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.97  E-value=6.1e-30  Score=216.04  Aligned_cols=220  Identities=16%  Similarity=0.206  Sum_probs=144.2

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC-C--
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD-G--   80 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~-~--   80 (248)
                      ..+|+|++||||||+++++.+++.++++|++|+++ +.++++|||++..+...+...  ....++|+.||+.+++. +  
T Consensus         2 ~~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l--~l~~~~i~~nGa~i~~~~~~~   79 (273)
T PRK00192          2 MMKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL--GLEDPFIVENGAAIYIPKNYF   79 (273)
T ss_pred             CcceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--CCCCCEEEEcCcEEEeccccc
Confidence            35899999999999998788999999999999999 999999999998766655541  11248999999999972 2  


Q ss_pred             ------------cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhh-hhhhh
Q 038498           81 ------------KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEER-DEFER  147 (248)
Q Consensus        81 ------------~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  147 (248)
                                  +.++...+    +.+.+.++++.+.+... ..+..... +...  ....+............ ..+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~-~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~  151 (273)
T PRK00192         80 PFQPDGERLKGDYWVIELGP----PYEELREILDEISDELG-YPLKGFGD-LSAE--EVAELTGLSGESARLAKDREFSE  151 (273)
T ss_pred             ccCCccccccCCceEEEcCC----CHHHHHHHHHHHHHHhC-CCeeehhh-CCHH--HHHHHhCcCHHHHHHHHhcccCC
Confidence                        35666655    57888888887655311 11110000 0000  00000000000000000 00000


Q ss_pred             -c--cccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----c-CCEEEEcCCCCCCCCCHH
Q 038498          148 -Y--DKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----F-NEIHFFGDKTYKGGNDHE  218 (248)
Q Consensus       148 -~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~-~~~~aiGD~~~~~~NDi~  218 (248)
                       +  .......+.+...+ +.+ ++.+..   +..++||+|.+ +||.|++++++     + +++++|||    +.||++
T Consensus       152 ~~~~~~~~~~~~~~~~~l-~~~-~~~~~~---~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GD----s~NDi~  221 (273)
T PRK00192        152 PFLWNGSEAAKERFEEAL-KRL-GLKVTR---GGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETIALGD----SPNDLP  221 (273)
T ss_pred             ceeecCchHHHHHHHHHH-HHc-CCEEEE---CCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEEcC----ChhhHH
Confidence             0  00011122232333 222 333432   25799999999 99999999996     7 99999999    999999


Q ss_pred             HHhhCCCceEEccCchhhHH----HHh-hhhc
Q 038498          219 IFESERTVGHTVTSPEDTME----KCK-ALFL  245 (248)
Q Consensus       219 M~~~~g~~~~av~Na~~~~k----~~A-~~v~  245 (248)
                      ||+.+| +++||+||++++|    ++| +.|+
T Consensus       222 m~~~ag-~~vam~NA~~~~k~~~~~~a~~~v~  252 (273)
T PRK00192        222 MLEAAD-IAVVVPGPDGPNPPLLPGIADGEFI  252 (273)
T ss_pred             HHHhCC-eeEEeCCCCCCCcccCccccCCceE
Confidence            999999 9999999999999    777 6766

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.97  E-value=1.4e-29  Score=211.88  Aligned_cols=219  Identities=17%  Similarity=0.159  Sum_probs=138.9

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC-C-cE---
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD-G-KL---   82 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~-~-~~---   82 (248)
                      +|++||||||+++++.+.+.++++|++|+++ +.++++|||++..+.+.+.. + ...+++|++||+.+++. + ..   
T Consensus         1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~-~~~~~~I~~NGa~i~~~~~~~~~~~   78 (256)
T TIGR01486         1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-L-GLEDPFIVENGGAIYGPRGWFTEPE   78 (256)
T ss_pred             CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-c-CCCCcEEEcCCeEEEeCCCcccCCC
Confidence            5899999999998774555799999999999 99999999999877665554 1 11258999999999983 3 22   


Q ss_pred             --EEEeecccccchHHHHHHHHHHHHhhcccccccccc-ccceeccccceecccCCCCChhhhhhhhhcccc-ccchHHH
Q 038498           83 --IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRG-TFIEFRSGMLNISPIGRNCSQEERDEFERYDKI-HNIRPKM  158 (248)
Q Consensus        83 --i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  158 (248)
                        ++...+    +.+.+.++++.+.... +..+....+ .+.+. .........  .........+...-.. .+..+.+
T Consensus        79 ~~~~~~~i----~~~~~~~il~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  150 (256)
T TIGR01486        79 YPVIALGI----PYEKIRARLEELSEEL-GFKFRGLGDLTDAEI-AELTGLSRE--LAALAQRREYSETILWSEERRERF  150 (256)
T ss_pred             eEEEEcCC----CHHHHHHHHHHHHHHh-CCCccchhhCCHHHH-HHHhCcCHH--HHHHHhhCccCCceecChHHHHHH
Confidence              455555    5788888888654421 111111000 00000 000000000  0000000000000000 1112222


Q ss_pred             HHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-------cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          159 VSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-------FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       159 ~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-------~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      ...+. . .++.+..+   ..++|++|++++|+.|+++|++       .+++++|||    +.||++||+.+| +++||+
T Consensus       151 ~~~~~-~-~~~~~~~s---~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD----~~ND~~Ml~~ag-~~vam~  220 (256)
T TIGR01486       151 TEALV-E-LGLEVTHG---NRFYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGD----SPNDLPLLEVVD-LAVVVP  220 (256)
T ss_pred             HHHHH-H-cCCEEEeC---CceEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcC----CHhhHHHHHHCC-EEEEeC
Confidence            23332 2 23444433   3589999999999999999986       457999999    999999999999 999999


Q ss_pred             Cch---hhHHHH--h-hhhccC
Q 038498          232 SPE---DTMEKC--K-ALFLAK  247 (248)
Q Consensus       232 Na~---~~~k~~--A-~~v~~~  247 (248)
                      ||+   +++|++  | ++|+.+
T Consensus       221 Na~~~~~~lk~~~~a~~~vt~~  242 (256)
T TIGR01486       221 GPNGPNVSLKPGDPGSFLLTPA  242 (256)
T ss_pred             CCCCCccccCccCCCcEEEcCC
Confidence            998   589998  5 488854

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.96  E-value=3.6e-29  Score=208.67  Aligned_cols=198  Identities=20%  Similarity=0.253  Sum_probs=128.3

Q ss_pred             eEEEEecCCCCCC---CCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498            8 LLALFDVDGTLTA---PRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus         8 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      .+|++||||||++   .+..+++++.+.+++++++ +.|+++|||++.++.+.+...-...++++|+.||+.|++++...
T Consensus         2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~   81 (249)
T TIGR01485         2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEV   81 (249)
T ss_pred             eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCc
Confidence            5899999999997   5667899999999999999 99999999999887766443112345679999999999865321


Q ss_pred             EEeecccccchHHHHHHHHHH---------HHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccc--cc
Q 038498           84 GTQSLKSFLGGEKLKEFINFT---------LHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDK--IH  152 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  152 (248)
                      .         ...+...+...         ........    .....  ......+...              .+.  ..
T Consensus        82 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~--~~~~~k~~~~--------------~~~~~~~  132 (249)
T TIGR01485        82 P---------DQHWAEYLSEKWQRDIVVAITDKFEELK----PQPDL--EQRPHKVSFF--------------LDPEAAP  132 (249)
T ss_pred             C---------CHHHHHHHhcccCHHHHHHHHhcCcccc----cCCcc--ccCCeeEEEE--------------echhhhh
Confidence            1         12222221111         11000000    00000  0000000000              000  00


Q ss_pred             cchHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhh-CCC
Q 038498          153 NIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFES-ERT  225 (248)
Q Consensus       153 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~-~g~  225 (248)
                      .....+...+.+ ++ .+.+..+  +..++|++|++++|+.|+++|++     ++++++|||    +.||++||+. ++ 
T Consensus       133 ~~~~~l~~~l~~-~~~~~~~~~~--~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD----~~ND~~ml~~~~~-  204 (249)
T TIGR01485       133 EVIKQLTEMLKE-TGLDVKLIYS--SGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGD----SGNDIELFEIGSV-  204 (249)
T ss_pred             HHHHHHHHHHHh-cCCCEEEEEE--CCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEEC----ChhHHHHHHccCC-
Confidence            011222222333 22 2334444  56899999999999999999997     789999999    9999999998 66 


Q ss_pred             ceEEccCchhhHHHHhh
Q 038498          226 VGHTVTSPEDTMEKCKA  242 (248)
Q Consensus       226 ~~~av~Na~~~~k~~A~  242 (248)
                      .+++|+||.+++|+.++
T Consensus       205 ~~va~~na~~~~k~~~~  221 (249)
T TIGR01485       205 RGVIVSNAQEELLQWYD  221 (249)
T ss_pred             cEEEECCCHHHHHHHHH
Confidence            99999999999998764

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=99.96  E-value=3.4e-29  Score=207.19  Aligned_cols=208  Identities=23%  Similarity=0.306  Sum_probs=130.0

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEee
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQS   87 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~~   87 (248)
                      +|++||||||+++++.+++.+ ++++ ++++ +.++++|||++.++.+.+...-...++++|+.||+.++..........
T Consensus         1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~   78 (236)
T TIGR02471         1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRF   78 (236)
T ss_pred             CeEEeccccccCCHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChh
Confidence            589999999999887788776 7776 6777 999999999999988887652112356799999999876332111111


Q ss_pred             cccccchHHHHHHHHHHHHhhccccccccccccceecc--ccceecccCCCCChhhhhhhhhccc-cccchHHHHHHHHH
Q 038498           88 LKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS--GMLNISPIGRNCSQEERDEFERYDK-IHNIRPKMVSVLRE  164 (248)
Q Consensus        88 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~  164 (248)
                      +...+...+.   ...+.+....  ++   +...+...  ....+...              ... .....+++...+.+
T Consensus        79 ~~~~~~~~~~---~~~~~~~~~~--~~---~~~~~~~~~~~~~~i~~~--------------~~~~~~~~~~~~~~~l~~  136 (236)
T TIGR02471        79 WQKHIDHDWR---RQAVVEALAD--IP---GLTLQDDQEQGPFKISYL--------------LDPEGEPILPQIRQRLRQ  136 (236)
T ss_pred             HHHHHhcCCC---HHHHHHHHhc--CC---CcEeCChhcCCCeeEEEE--------------ECcccchHHHHHHHHHHh
Confidence            0000000000   0001111000  00   00000000  00000000              000 00112334444444


Q ss_pred             HcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498          165 KFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK  239 (248)
Q Consensus       165 ~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~  239 (248)
                      ....+.+..+  +..++|++|+++||+.|+++|++     ++++++|||    +.||++||+.+| ++++|+||.+++|+
T Consensus       137 ~~~~~~~~~~--~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD----~~nD~~ml~~~~-~~iav~na~~~~k~  209 (236)
T TIGR02471       137 QSQAAKVILS--CGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGD----SGNDEEMLRGLT-LGVVVGNHDPELEG  209 (236)
T ss_pred             ccCCEEEEEE--CCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcC----CccHHHHHcCCC-cEEEEcCCcHHHHH
Confidence            3223334444  45789999999999999999997     668999999    999999999999 99999999999999


Q ss_pred             Hhh----hhccC
Q 038498          240 CKA----LFLAK  247 (248)
Q Consensus       240 ~A~----~v~~~  247 (248)
                      .|+    +|+..
T Consensus       210 ~a~~~~~~v~~~  221 (236)
T TIGR02471       210 LRHQQRIYFANN  221 (236)
T ss_pred             hhcCCcEEEcCC
Confidence            999    77754

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN02382 probable sucrose-phosphatase

Probab=99.96  E-value=4.5e-28  Score=214.46  Aligned_cols=212  Identities=17%  Similarity=0.212  Sum_probs=129.3

Q ss_pred             ccceEEEEecCCCCCCC--CCCCCHHHHHHH-HHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498            5 KQGLLALFDVDGTLTAP--RKAATPQMLEFM-RELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG   80 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~--~~~i~~~~~~al-~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~   80 (248)
                      ...-+|++||||||+++  ++.++....++| +++.++ +.++++|||++..+.+.+...-...++++|+.||+.|++.+
T Consensus         7 ~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~   86 (413)
T PLN02382          7 SPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGE   86 (413)
T ss_pred             CCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCC
Confidence            34578999999999987  447887777777 888888 99999999996655443322112346789999999999755


Q ss_pred             cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccC-CCCChhhhhhhhhccccccchHHHH
Q 038498           81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIG-RNCSQEERDEFERYDKIHNIRPKMV  159 (248)
Q Consensus        81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  159 (248)
                      ....         ...+...++.....   ..+       .+.   ...+.... .....+....+..+.. ......+.
T Consensus        87 ~~~~---------d~~w~~~l~~~w~~---~~v-------~~~---~~~~~~l~~q~~~~~~~~Ki~~~~~-~~~~~~~~  143 (413)
T PLN02382         87 SMVP---------DHGWVEYLNKKWDR---EIV-------VEE---TSKFPELKLQPETEQRPHKVSFYVD-KKKAQEVI  143 (413)
T ss_pred             CCcc---------ChhHHHHHhccCCh---hhH-------HHH---HhcCCCcccCCcccCCCeEEEEEec-hHHhHHHH
Confidence            3332         22333333211110   000       000   00000000 0000000000000000 00112233


Q ss_pred             HHHHHHcC----CceEEEEecCceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498          160 SVLREKFA----HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFESERTVG  227 (248)
Q Consensus       160 ~~l~~~~~----~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~~g~~~  227 (248)
                      ..+.+.+.    .+.+..+  +..++||+|+++|||.||++|++        ++++++|||    +.||++||+.+|+++
T Consensus       144 ~~l~~~~~~~g~~~~i~~s--~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGD----s~NDleMl~~ag~~g  217 (413)
T PLN02382        144 KELSERLEKRGLDVKIIYS--GGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGD----SGNDAELFSVPDVYG  217 (413)
T ss_pred             HHHHHHHHhcCCcEEEEEE--CCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeC----CHHHHHHHhcCCCCE
Confidence            44444442    2334445  56799999999999999999986        568999999    999999999997459


Q ss_pred             EEccCchhhHHHHhhhhc
Q 038498          228 HTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       228 ~av~Na~~~~k~~A~~v~  245 (248)
                      |+|+||.+++|+.|.+++
T Consensus       218 vam~NA~~elk~~a~~~~  235 (413)
T PLN02382        218 VMVSNAQEELLQWYAENA  235 (413)
T ss_pred             EEEcCCcHHHHHHHHhhc
Confidence            999999999998764443

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=99.96  E-value=3.4e-27  Score=198.16  Aligned_cols=195  Identities=15%  Similarity=0.181  Sum_probs=139.8

Q ss_pred             ceEEEEecCCCCCCC-----CCCCCHHHHHHHHHHhh-c-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-
Q 038498            7 GLLALFDVDGTLTAP-----RKAATPQMLEFMRELRK-V-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-   78 (248)
Q Consensus         7 ~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~-~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-   78 (248)
                      ..+|++|+||||++.     ...++++++++|++|.+ . +.|+++|||++..+.+.++..   .+ +++++||+.+++ 
T Consensus        14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~---~~-~~i~~nGa~i~~~   89 (266)
T PRK10187         14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY---RF-PLAGVHGAERRDI   89 (266)
T ss_pred             CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc---cc-eEEEeCCCeeecC
Confidence            479999999999984     56799999999999998 6 999999999999988877641   22 689999999987 


Q ss_pred             CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHH
Q 038498           79 DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKM  158 (248)
Q Consensus        79 ~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (248)
                      ++.. ....+    +.+.++.+++.++++..+     ..+.+++.+...+.  ..++.++.           ..+....+
T Consensus        90 ~~~~-~~~~l----~~~~~~~i~~~l~~~~~~-----~pg~~ve~k~~~~~--~h~r~~~~-----------~~~~~~~l  146 (266)
T PRK10187         90 NGKT-HIVHL----PDAIARDISVQLHTALAQ-----LPGAELEAKGMAFA--LHYRQAPQ-----------HEDALLAL  146 (266)
T ss_pred             CCCe-eeccC----ChhHHHHHHHHHHHHhcc-----CCCcEEEeCCcEEE--EECCCCCc-----------cHHHHHHH
Confidence            4443 33434    467777777777665222     12445543322111  11121110           01112244


Q ss_pred             HHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC----CCceEE
Q 038498          159 VSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE----RTVGHT  229 (248)
Q Consensus       159 ~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~----g~~~~a  229 (248)
                      ...+.+.++.  +.+.. |..++|+.|+++|||.||+++++     .+++++|||    +.||++||+.+    | .+|+
T Consensus       147 ~~~i~~~~~~--~~~~~-g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD----~~nD~~mf~~~~~~~g-~~va  218 (266)
T PRK10187        147 AQRITQIWPQ--LALQP-GKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGD----DLTDEAGFAVVNRLGG-ISVK  218 (266)
T ss_pred             HHHHHhhCCc--eEEeC-CCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcC----CccHHHHHHHHHhcCC-eEEE
Confidence            4556666654  32332 68999999999999999999997     568999999    99999999998    8 9999


Q ss_pred             ccCchhh
Q 038498          230 VTSPEDT  236 (248)
Q Consensus       230 v~Na~~~  236 (248)
                      |+|+.+.
T Consensus       219 vg~a~~~  225 (266)
T PRK10187        219 VGTGATQ  225 (266)
T ss_pred             ECCCCCc
Confidence            9999754

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.95  E-value=4.3e-27  Score=192.69  Aligned_cols=205  Identities=13%  Similarity=0.090  Sum_probs=126.8

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CC-cEE--
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DG-KLI--   83 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~-~~i--   83 (248)
                      +|++||||||+++++.+++.++++|++|+++ +.|+++|||++..+.+.+.. +.....++||+||+.+++ .. +.+  
T Consensus         1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~~~~~I~~NGa~i~~~~~~~~~~~   79 (221)
T TIGR02463         1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLTGDPYIAENGAAIHLEELWREEPG   79 (221)
T ss_pred             CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCCcEEEeCCcEEEcCcccccCCC
Confidence            5899999999998776777799999999999 99999999999876665554 111114899999999997 33 322  


Q ss_pred             ---EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhh-hc-c-ccccchHH
Q 038498           84 ---GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFE-RY-D-KIHNIRPK  157 (248)
Q Consensus        84 ---~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~  157 (248)
                         ....    ++.+.+.++++.+.+.. ...+....+.+.........+...  ........... .+ . ...+..+.
T Consensus        80 ~~~~~~~----~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  152 (221)
T TIGR02463        80 YPRIILG----ISYGIIRLVLETLSEEL-HFKFTPFDDLSDAEIAELTGLSGS--QAALAQDREASVPLLWRDSDSRMPR  152 (221)
T ss_pred             ceEEecC----CCHHHHHHHHHHHHHHh-CCCceehhhCCHHHHHHHhCcCHH--HHHHHHhccCCccEEecCchhHHHH
Confidence               2333    35788888888765531 111111111000000000000000  00000000000 00 0 00112222


Q ss_pred             HHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          158 MVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      +.+.+ .+. ++.+..   +..++||+|++++|+.|++++++     ++++++|||    +.||++||+.+| ++|||.
T Consensus       153 ~~~~l-~~~-~~~~~~---~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD----~~NDi~ml~~ag-~~va~~  221 (221)
T TIGR02463       153 FTALL-ADL-GLAIVQ---GNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGD----GPNDLPLLEVAD-YAVVIK  221 (221)
T ss_pred             HHHHH-HHc-CCeEEe---cCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECC----CHHHHHHHHhCC-ceEEeC
Confidence            33333 222 344433   25689999999999999999997     889999999    999999999999 999973

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=99.94  E-value=1.1e-25  Score=205.07  Aligned_cols=214  Identities=18%  Similarity=0.279  Sum_probs=139.3

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-C---
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-D---   79 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~---   79 (248)
                      ++.|+|++||||||+++++.++++++++|++++++ +.|++||||++..+...+.. + ...+++|++||+.++. +   
T Consensus       414 ~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~-L-gl~~~~I~eNGA~I~~~~~~~  491 (694)
T PRK14502        414 QFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE-L-GIKDPFITENGGAIFIPKDYF  491 (694)
T ss_pred             ceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-c-CCCCeEEEcCCCEEEECCCcc
Confidence            56899999999999998888888999999999999 99999999999876554443 1 1125899999999997 3   


Q ss_pred             -----------CcEEEEeecccccchHHHHHHHHHHHHhhc-ccccc-ccccccceecccc-c-eecccCCCCChhhhhh
Q 038498           80 -----------GKLIGTQSLKSFLGGEKLKEFINFTLHYIA-DLDIP-IKRGTFIEFRSGM-L-NISPIGRNCSQEERDE  144 (248)
Q Consensus        80 -----------~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~-~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~  144 (248)
                                 +..++...+    +.+.+.++++.+.+... ...+. ...+.|+...... . ..... ..........
T Consensus       492 ~~~~~~~~~~~~~iI~~~~l----~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~-TgL~~~~a~~  566 (694)
T PRK14502        492 RLPFAYDRVAGNYLVIELGM----AYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL-TDLNLKQAEL  566 (694)
T ss_pred             cccccccccCCCeEEEEcCC----CHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh-hCCCHHHHHH
Confidence                       235666655    68899999998877311 10000 0111122111100 0 00000 0111000000


Q ss_pred             hh---hcccc-----ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEE--cCC
Q 038498          145 FE---RYDKI-----HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFF--GDK  209 (248)
Q Consensus       145 ~~---~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~ai--GD~  209 (248)
                      ..   ...++     .+..+++.+.+.+.  +  +.+.. ++.+++++ +++|||.|+++|++     .+++++|  || 
T Consensus       567 a~~Re~seKIl~~gd~e~Leel~~~L~~~--~--l~v~~-g~rfleI~-~gvdKG~AL~~L~e~~gI~~~eViafalGD-  639 (694)
T PRK14502        567 AKQREYSETVHIEGDKRSTNIVLNHIQQS--G--LEYSF-GGRFYEVT-GGNDKGKAIKILNELFRLNFGNIHTFGLGD-  639 (694)
T ss_pred             HhhccCceeEEEcCCHHHHHHHHHHHHHc--C--cEEEE-CCEEEEeC-CCCCHHHHHHHHHHHhCCCccceEEEEcCC-
Confidence            00   01111     11223333344433  3  44444 57899999 59999999999997     5688888  99 


Q ss_pred             CCCCCCCHHHHhhCCCceEEccCchhh
Q 038498          210 TYKGGNDHEIFESERTVGHTVTSPEDT  236 (248)
Q Consensus       210 ~~~~~NDi~M~~~~g~~~~av~Na~~~  236 (248)
                         +.||++||+.+| ++|||++....
T Consensus       640 ---s~NDisMLe~Ag-~gVAM~~~~~~  662 (694)
T PRK14502        640 ---SENDYSMLETVD-SPILVQRPGNK  662 (694)
T ss_pred             ---cHhhHHHHHhCC-ceEEEcCCCCC
Confidence               999999999999 99999997663

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=99.94  E-value=2.1e-25  Score=180.49  Aligned_cols=192  Identities=30%  Similarity=0.424  Sum_probs=124.9

Q ss_pred             EEEEecCCCCCCCC-CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEe
Q 038498            9 LALFDVDGTLTAPR-KAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQ   86 (248)
Q Consensus         9 li~~DlDGTLl~~~-~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~   86 (248)
                      +|++|+||||++++ ..++++++++|++|+++ +.++++|||++..+.+.+.. +   ..++|++||+.++..++.++..
T Consensus         1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~-~---~~~~i~~nGa~i~~~~~~~~~~   76 (204)
T TIGR01484         1 LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQ-L---PLPLIAENGALIFYPGEILYIE   76 (204)
T ss_pred             CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHh-C---CCCEEECCCcEEEECCEEEEEc
Confidence            58999999999987 67999999999999999 99999999999988877765 2   2589999999999876666554


Q ss_pred             ecccccchHHHHHHHHHHHHhhcccccc--ccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHH
Q 038498           87 SLKSFLGGEKLKEFINFTLHYIADLDIP--IKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLRE  164 (248)
Q Consensus        87 ~~~~~i~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  164 (248)
                        +    .+.++.+++............  ...+.+.+.+.....+..  ....           ........+...+..
T Consensus        77 --~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~-----------~~~~~~~~~~~~~~~  137 (204)
T TIGR01484        77 --P----SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHY--VGAE-----------LGQELDSKMRERLEK  137 (204)
T ss_pred             --c----cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEE--eccc-----------hhhHHHHHHHHHHHh
Confidence              1    233444444332210000000  000111111111011100  0000           000001112222222


Q ss_pred             H---cCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          165 K---FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       165 ~---~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      .   .+.+.+.++  +..++|++|++++|+.+++.+++     ++++++|||    +.||++||+.+| .++||
T Consensus       138 ~~~~~~~~~~~~s--~~~~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD----~~nD~~~~~~~~-~~vam  204 (204)
T TIGR01484       138 IGRNDLELEAIYV--GKTDLEVLPAGVDKGSALQALLKELNGKRDEILAFGD----SGNDEEMFEVAG-LAVAV  204 (204)
T ss_pred             hccccCcEEEEEe--cCCEEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcC----CHHHHHHHHHcC-CceEC
Confidence            1   234445444  57899999999999999999997     678999999    999999999999 99997

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=99.94  E-value=1.5e-26  Score=192.29  Aligned_cols=204  Identities=20%  Similarity=0.235  Sum_probs=114.3

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGT   85 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~   85 (248)
                      .+++++||||||++.+.....+..+.++...+. +.++++|||++.++.+.+...-...+|++||++|+.||+..+....
T Consensus         2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d   81 (247)
T PF05116_consen    2 PRLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPD   81 (247)
T ss_dssp             SEEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-
T ss_pred             CEEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcCh
Confidence            589999999999922222223333333323344 9999999999998877766532245789999999999994455444


Q ss_pred             eecccccchHHH-HHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHH
Q 038498           86 QSLKSFLGGEKL-KEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLRE  164 (248)
Q Consensus        86 ~~~~~~i~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  164 (248)
                      ..|...+...+- +.+.+.+.+. ..  +..    ..+.......++.+..            .+......+.+.+.+.+
T Consensus        82 ~~w~~~i~~~w~~~~v~~~l~~~-~~--l~~----q~~~~q~~~k~sy~~~------------~~~~~~~~~~i~~~l~~  142 (247)
T PF05116_consen   82 EEWQAHIDERWDRERVEEILAEL-PG--LRP----QPESEQRPFKISYYVD------------PDDSADILEEIRARLRQ  142 (247)
T ss_dssp             HHHHHHHHTT--HHHHHHHHHCH-CC--EEE----GGCCCGCCTCECEEEE------------TTSHCHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcCChHHHHHHHHHh-hC--ccc----CCccccCCeeEEEEEe------------cccchhHHHHHHHHHHH
Confidence            444322222111 1111111111 00  000    0000000001111100            00011112333333332


Q ss_pred             HcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhh
Q 038498          165 KFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDT  236 (248)
Q Consensus       165 ~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~  236 (248)
                        .++.+.+...+...+||+|++++|+.|+++|++     +++++++||    |+||++||..+. ++|+|+||.++
T Consensus       143 --~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGD----SgND~~mL~~~~-~~vvV~Na~~e  212 (247)
T PF05116_consen  143 --RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGD----SGNDLEMLEGGD-HGVVVGNAQPE  212 (247)
T ss_dssp             --CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEES----SGGGHHHHCCSS-EEEE-TTS-HH
T ss_pred             --cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeC----CCCcHHHHcCcC-CEEEEcCCCHH
Confidence              234443332256789999999999999999997     679999999    999999998886 99999999999

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=99.93  E-value=5.2e-25  Score=180.60  Aligned_cols=199  Identities=18%  Similarity=0.133  Sum_probs=124.1

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-C-------
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-D-------   79 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~-------   79 (248)
                      +|+|||||||+++ ..++++++++|++|+++ +.++++|||++..+.+.+...  ...+++|++||+.|++ .       
T Consensus         1 li~~DlDGTLl~~-~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l--g~~~~~I~~NGa~I~~~~~~~~~~~   77 (225)
T TIGR02461         1 VIFTDLDGTLLPP-GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREEL--GVEPPFIVENGGAIFIPRGYFPFPV   77 (225)
T ss_pred             CEEEeCCCCCcCC-CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc--CCCCcEEEcCCcEEEecCccccccc
Confidence            5899999999995 45677899999999999 999999999998766554431  1124799999999997 2       


Q ss_pred             -------CcEEEEeecccccchHHHHHHHHHHHH-hhccccccccccccceeccccceecccCCCCChhhhhhhhhc--c
Q 038498           80 -------GKLIGTQSLKSFLGGEKLKEFINFTLH-YIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERY--D  149 (248)
Q Consensus        80 -------~~~i~~~~~~~~i~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  149 (248)
                             ++.++...+    +.+.+.++++.+.+ +.    +....+.+.........+....  ........+...  -
T Consensus        78 ~~~~~~~~~~i~~~~l----~~~~~~~il~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ki~~~  147 (225)
T TIGR02461        78 GAGREVGNYEVIELGK----PVAKIRAALKEAENEYG----LKYYGNSTAEEVEKLTGLPREL--APLAKRREYSETIFL  147 (225)
T ss_pred             cccccCCCeEEEEcCC----CHHHHHHHHHHHHHhcC----ccchhcCCHHHHHHHHCcCHHH--HHHHHhhhcCCcccC
Confidence                   445777776    47889999988877 22    1110000000000000000000  000000001000  0


Q ss_pred             ccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-------cCCEEEEcCCCCCCCCCHHHHhh
Q 038498          150 KIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-------FNEIHFFGDKTYKGGNDHEIFES  222 (248)
Q Consensus       150 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-------~~~~~aiGD~~~~~~NDi~M~~~  222 (248)
                      ...+...++.+.+. . .++.+..+  ++ +++ +++++||+.|++.+++       ..++++|||    +.||++||+.
T Consensus       148 ~~~e~~~~~~~~~~-~-~~~~~~~s--~~-~~~-i~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD----~~nD~~ml~~  217 (225)
T TIGR02461       148 WSREGWEAILVTAR-A-RGLKYTHG--GR-FYT-VHGGSDKGKAIKRLLDLYKLRPGAIESVGLGD----SENDFPMFEV  217 (225)
T ss_pred             CCHHHHHHHHHHHH-H-cCCcEEEC--CE-EEE-ECCCCCHHHHHHHHHHHhccccCcccEEEEcC----CHHHHHHHHh
Confidence            00111223333342 2 23334433  33 455 4669999999999986       347999999    9999999999


Q ss_pred             CCCceEEcc
Q 038498          223 ERTVGHTVT  231 (248)
Q Consensus       223 ~g~~~~av~  231 (248)
                      +| ++|+|+
T Consensus       218 ag-~~v~v~  225 (225)
T TIGR02461       218 VD-LAFLVG  225 (225)
T ss_pred             CC-CcEecC
Confidence            99 999986

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.91  E-value=3.3e-23  Score=196.10  Aligned_cols=209  Identities=19%  Similarity=0.266  Sum_probs=136.6

Q ss_pred             ccceEEEEecCCCCCCCC-----CCCCHHHHHHHHHHhh-c-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEE
Q 038498            5 KQGLLALFDVDGTLTAPR-----KAATPQMLEFMRELRK-V-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAH   77 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~-----~~i~~~~~~al~~l~~-~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~   77 (248)
                      .+.++|+||+||||++..     ..++++++++|++|.+ . +.|+++|||++..+.+.++. +  +. ++|++||+.++
T Consensus       490 ~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~-~--~l-~liaenG~~i~  565 (726)
T PRK14501        490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD-L--PI-HLVAEHGAWSR  565 (726)
T ss_pred             ccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCC-C--Ce-EEEEeCCEEEe
Confidence            467999999999999742     3578999999999999 5 99999999999999888875 1  23 79999999998


Q ss_pred             eCCcEEEEeeccc-ccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchH
Q 038498           78 KDGKLIGTQSLKS-FLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRP  156 (248)
Q Consensus        78 ~~~~~i~~~~~~~-~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (248)
                      ..++.+....... .+ .+.+..+++.+...        ..+.+.+......  ....+....+    +.     ....+
T Consensus       566 ~~~~~w~~~~~~~~~w-~~~v~~il~~~~~~--------~~gs~ie~k~~~l--~~~~r~~d~~----~~-----~~~a~  625 (726)
T PRK14501        566 APGGEWQLLEPVATEW-KDAVRPILEEFVDR--------TPGSFIEEKEASL--AWHYRNADPE----LG-----EARAN  625 (726)
T ss_pred             CCCCceEECCCcchhH-HHHHHHHHHHHHhc--------CCCcEEEEcceEE--EEEccCCCHH----HH-----HHHHH
Confidence            7443322221110 00 22233333322221        2355555432211  1111111110    00     00112


Q ss_pred             HHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhC---CCceEEc
Q 038498          157 KMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESE---RTVGHTV  230 (248)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~---g~~~~av  230 (248)
                      ++...+...+.+..+.... |..++||.|+++|||.|++.+++   .+.+++|||    +.||++||+.+   | .+++|
T Consensus       626 ~l~~~l~~~~~~~~~~v~~-g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD----~~nDe~Mf~~~~~~~-~~v~v  699 (726)
T PRK14501        626 ELILALSSLLSNAPLEVLR-GNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGD----DTTDEDMFRALPETA-ITVKV  699 (726)
T ss_pred             HHHHHHHHHhcCCCeEEEE-CCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECC----CCChHHHHHhcccCc-eEEEE
Confidence            3334444433333344443 57999999999999999999997   789999999    99999999985   6 89999


Q ss_pred             cCchhhHHHHhhhhccC
Q 038498          231 TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~~~  247 (248)
                      +|++    ..|++++++
T Consensus       700 G~~~----s~A~~~l~~  712 (726)
T PRK14501        700 GPGE----SRARYRLPS  712 (726)
T ss_pred             CCCC----CcceEeCCC
Confidence            9963    566666654

>TIGR00685 T6PP trehalose-phosphatase

Probab=99.90  E-value=1.2e-22  Score=168.74  Aligned_cols=212  Identities=17%  Similarity=0.139  Sum_probs=135.6

Q ss_pred             cceEEEEecCCCCCCCC-----CCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe
Q 038498            6 QGLLALFDVDGTLTAPR-----KAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK   78 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~-----~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~   78 (248)
                      +.++++||+||||++..     ..+++++.++|++|.+.  +.|+|+|||++.++...+..   ..+ +++++||+.++.
T Consensus         2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~---~~~-~l~g~hG~~~~~   77 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKL---PGL-GLAGEHGCEMKD   77 (244)
T ss_pred             CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCC---Cce-eEEeecCEEEec
Confidence            45899999999999742     34789999999999888  77899999998777665542   122 689999999886


Q ss_pred             CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHH
Q 038498           79 DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKM  158 (248)
Q Consensus        79 ~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (248)
                      ++.......++. . ...+++....+.++...     ..|.++|.+...  +...++.++..+.           .....
T Consensus        78 ~g~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~-----~pG~~iE~K~~s--~~~hyr~a~d~~~-----------~~~~~  137 (244)
T TIGR00685        78 NGSCQDWVNLTE-K-IPSWKVRANELREEITT-----RPGVFIERKGVA--LAWHYRQAPVPEL-----------ARFRA  137 (244)
T ss_pred             CCCcceeeechh-h-hhhHHHHHHHHHHHHhc-----CCCcEEEecceE--EEEEeccCCCcHH-----------HHHHH
Confidence            554422222211 0 12445555555554332     146666654322  2222232211000           00011


Q ss_pred             HHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC-------CCc
Q 038498          159 VSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE-------RTV  226 (248)
Q Consensus       159 ~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~-------g~~  226 (248)
                      .+.+.+..+...+.+.. +...+|+.|.++|||.+++.+++     .+++++|||    +.||++||+.+       |..
T Consensus       138 ~~~~~~~~~~~~~~v~~-g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD----~~~D~~~~~~~~~~~~~~g~~  212 (244)
T TIGR00685       138 KELKEKILSFTDLEVMD-GKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGD----DITDEDAFRVVNNQWGNYGFY  212 (244)
T ss_pred             HHHHHHHhcCCCEEEEE-CCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcC----CCcHHHHHHHHhcccCCCCeE
Confidence            11111111212244443 67899999999999999999997     568999999    99999999988       337


Q ss_pred             eEEccCchhhHHHHhhhhccCC
Q 038498          227 GHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       227 ~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      +++|+.  ...+..|++++++|
T Consensus       213 ~v~v~~--g~~~~~A~~~~~~~  232 (244)
T TIGR00685       213 PVPIGS--GSKKTVAKFHLTGP  232 (244)
T ss_pred             EEEEec--CCcCCCceEeCCCH
Confidence            888863  34566677776654

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.89  E-value=3e-22  Score=166.45  Aligned_cols=212  Identities=9%  Similarity=0.036  Sum_probs=124.3

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGT   85 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~   85 (248)
                      +|+||+||||||++++..+++.+.++|++|+++ +.|+++|||++.++...... +.. -+++|++||+.|+........
T Consensus         1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl-~~p~I~eNGA~I~~p~~~~~~   78 (302)
T PRK12702          1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRL-EHPFICEDGSAIYVPEHYFPA   78 (302)
T ss_pred             CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCC-CCeEEEeCCcEEEEccccccc
Confidence            489999999999998888999999999999999 99999999999876554443 111 248999999999974322100


Q ss_pred             ----------ee---cccccchHHHHHHHHHHHHhhcccccccc-ccccceec-cccceecccCCCCChhhhhhhhhccc
Q 038498           86 ----------QS---LKSFLGGEKLKEFINFTLHYIADLDIPIK-RGTFIEFR-SGMLNISPIGRNCSQEERDEFERYDK  150 (248)
Q Consensus        86 ----------~~---~~~~i~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (248)
                                ..   ..--.+...+..+++.+.+..   ...++ .+.+...+ .....++..  ....-...+|...-.
T Consensus        79 ~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~---~~~f~gF~d~t~~ei~~~TGL~~~--~A~~A~~Re~SEp~~  153 (302)
T PRK12702         79 GILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDS---HLDLIGFGDWTASELAAATGIPLE--EAERAQKREYSEIFS  153 (302)
T ss_pred             cccccccccCCCceEEecCCCHHHHHHHHHHHHHHh---CCCceehhhCCHHHHHHHhCcCHH--HHHHHHhccCCcceE
Confidence                      00   000123666777777666631   11110 00010000 000001000  000000001110000


Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEee---------------------CCCCHHHHHHHhhc---cC----C
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP---------------------QGWDKTYCLRYLDD---FN----E  202 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~---------------------~~~~K~~al~~l~~---~~----~  202 (248)
                      .....+...+.+.+.  +  +....||. ++-++.                     .+++||.|++.|.+   ..    .
T Consensus       154 w~~~~~~~~~~~~~~--g--~~~~~GgR-f~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~  228 (302)
T PRK12702        154 YSGDPARLREAFAQQ--E--ANLTQHLL-RLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIK  228 (302)
T ss_pred             ecCCHHHHHHHHHHc--C--CeEEecCc-eEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCce
Confidence            011111222222222  2  33444333 444443                     49999999999997   33    6


Q ss_pred             EEEEcCCCCCCCCCHHHHhhCCCceEEccCchh
Q 038498          203 IHFFGDKTYKGGNDHEIFESERTVGHTVTSPED  235 (248)
Q Consensus       203 ~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~  235 (248)
                      ++++||    |.||++||+++. ++|.|.+..-
T Consensus       229 tiaLGD----spND~~mLe~~D-~~vvi~~~~~  256 (302)
T PRK12702        229 ALGIGC----SPPDLAFLRWSE-QKVVLPSPIA  256 (302)
T ss_pred             EEEecC----ChhhHHHHHhCC-eeEEecCCCC
Confidence            999999    999999999999 9999977544

>PLN02580 trehalose-phosphatase

Probab=99.87  E-value=1.5e-20  Score=163.08  Aligned_cols=210  Identities=19%  Similarity=0.303  Sum_probs=133.5

Q ss_pred             cccceEEEEecCCCCCCC-----CCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe
Q 038498            4 RKQGLLALFDVDGTLTAP-----RKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK   78 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~   78 (248)
                      +.+..++|+|+||||.+-     ...++++++++|++|.+...++|+|||+...+.+.++.   ..+ ++++++|..+..
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~---~~l-~laGsHG~e~~~  191 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL---TEL-YYAGSHGMDIMG  191 (384)
T ss_pred             hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC---CCc-cEEEeCCceeec
Confidence            346789999999999843     23579999999999998877999999999999998885   223 788999999764


Q ss_pred             -CCcEEE----------------EeecccccchH---HHHHHHHHHHHhhccccccccccccceeccccceecccCCCCC
Q 038498           79 -DGKLIG----------------TQSLKSFLGGE---KLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCS  138 (248)
Q Consensus        79 -~~~~i~----------------~~~~~~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (248)
                       .+....                ...+.  ...+   .+.++.+.+.+....     ..|.++|....  .+..+++..+
T Consensus       192 p~~~~~~~~~~~~~~~~~~~g~~~~~~~--~a~~~~~~i~~v~~~l~e~~~~-----~pGs~VE~K~~--svavHYR~a~  262 (384)
T PLN02580        192 PVRESVSNDHPNCIKSTDQQGKEVNLFQ--PASEFLPMIDEVFRSLVESTKD-----IKGAKVENHKF--CVSVHYRNVD  262 (384)
T ss_pred             CCCCcccccccccccccccccccccccc--cchhhhhhHHHHHHHHHHHhcc-----CCCCEEEecCc--EEEEEeCCCC
Confidence             221100                00000  0011   223444444433111     24666664332  2233334332


Q ss_pred             hhhhhhhhhccccccchHHHHHHHHHHcCCceEEEEecCceEEEEee-CCCCHHHHHHHhhc-c-----CC--EEEEcCC
Q 038498          139 QEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP-QGWDKTYCLRYLDD-F-----NE--IHFFGDK  209 (248)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~-~~~~K~~al~~l~~-~-----~~--~~aiGD~  209 (248)
                      ....         . ........+...++++  .+.. |...+|+.| .++|||.|+++|++ .     +.  .++||| 
T Consensus       263 ~~~~---------~-~~~~~l~~~l~~~~~l--~v~~-Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGD-  328 (384)
T PLN02580        263 EKNW---------P-LVAQCVHDVLKKYPRL--RLTH-GRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGD-  328 (384)
T ss_pred             chHH---------H-HHHHHHHHHHHhCCce--EEEe-CCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECC-
Confidence            2110         0 1112222333455654  3333 578999999 59999999999997 1     23  389999 


Q ss_pred             CCCCCCCHHHHhh-----CCCceEEccCchhhHHHHhhhhcc
Q 038498          210 TYKGGNDHEIFES-----ERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       210 ~~~~~NDi~M~~~-----~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                         +.||.+||+.     +| .+|+|+|+.++.  .|+|-++
T Consensus       329 ---D~TDedmF~~L~~~~~G-~~I~Vgn~~~~t--~A~y~L~  364 (384)
T PLN02580        329 ---DRTDEDAFKVLREGNRG-YGILVSSVPKES--NAFYSLR  364 (384)
T ss_pred             ---CchHHHHHHhhhccCCc-eEEEEecCCCCc--cceEEcC
Confidence               9999999996     57 999999987655  3455443

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.85  E-value=3.6e-20  Score=176.15  Aligned_cols=195  Identities=17%  Similarity=0.225  Sum_probs=126.8

Q ss_pred             cccceEEEEecCCCCCCCCC---CCCHHHHHHHHHHhh-c-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe
Q 038498            4 RKQGLLALFDVDGTLTAPRK---AATPQMLEFMRELRK-V-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK   78 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~---~i~~~~~~al~~l~~-~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~   78 (248)
                      +.+.++|++|+||||++...   .++++++++|++|.+ . +.|+|+|||++.++.+.++..  ..+ +++++||+.+..
T Consensus       593 ~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~--~~l-~laaEHG~~ir~  669 (854)
T PLN02205        593 RTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC--EKL-GIAAEHGYFLRL  669 (854)
T ss_pred             hhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC--CCe-EEEEeCCEEEEe
Confidence            35689999999999997753   678999999999854 4 999999999999999999861  122 789999999887


Q ss_pred             CCcEEEEeecccccchHHHHHHHHHH-HHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHH
Q 038498           79 DGKLIGTQSLKSFLGGEKLKEFINFT-LHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPK  157 (248)
Q Consensus        79 ~~~~i~~~~~~~~i~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (248)
                      .++..+....+  .....+++.+..+ +.|...     ..|.|++.....  +.+.++....    ++...     ..++
T Consensus       670 ~~~~~w~~~~~--~~~~~w~~~v~~i~~~y~er-----tpGs~IE~K~~s--lv~HyR~adp----d~~~~-----qa~e  731 (854)
T PLN02205        670 KRDVEWETCVP--VADCSWKQIAEPVMQLYTET-----TDGSTIEDKETA--LVWCYEDADP----DFGSC-----QAKE  731 (854)
T ss_pred             CCCceeeecch--hhhHHHHHHHHHHHHHHhcC-----CCchhheecceE--EEEehhhCCh----HHhhh-----hhHH
Confidence            54432222211  1122344433333 333111     356777644321  1222222211    11000     1123


Q ss_pred             HHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498          158 MVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFESER  224 (248)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~~g  224 (248)
                      ....+.+.+.+..+.... |..++||.|+++|||.|++.|++        ++.+++|||    +.||.+||+.++
T Consensus       732 l~~~l~~~l~~~~~~v~~-G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GD----D~nDedMF~~~~  801 (854)
T PLN02205        732 LLDHLESVLANEPVTVKS-GQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGD----DRSDEDMFEVIT  801 (854)
T ss_pred             HHHHHHHHHhcCceEEEE-CCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcC----CccHHHHHHHhh
Confidence            334444444332233333 68999999999999999999973        678999999    999999999774

>PLN03017 trehalose-phosphatase

Probab=99.84  E-value=2.5e-19  Score=154.17  Aligned_cols=211  Identities=19%  Similarity=0.241  Sum_probs=131.5

Q ss_pred             ccceEEEEecCCCCC---C-CCC-CCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC
Q 038498            5 KQGLLALFDVDGTLT---A-PRK-AATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD   79 (248)
Q Consensus         5 ~~~kli~~DlDGTLl---~-~~~-~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~   79 (248)
                      .+..+||+|+||||+   + ++. .+++++.++|++|.+.+.++|+|||++..+.+.++.   .. -+++++||+.+...
T Consensus       109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l---~~-l~l~g~hGa~i~~p  184 (366)
T PLN03017        109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKL---AE-LYYAGSHGMDIKGP  184 (366)
T ss_pred             CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcc---cC-ceEEEcCCcEEecC
Confidence            456899999999999   3 444 699999999999993399999999999998877553   12 38999999998862


Q ss_pred             -CcEEEE------eecccccc-hHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhcccc
Q 038498           80 -GKLIGT------QSLKSFLG-GEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKI  151 (248)
Q Consensus        80 -~~~i~~------~~~~~~i~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (248)
                       +.....      ..+..... ...+.++.+.+.+....     ..|.++|...-  .+..+++..+....         
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~-----~pGa~VE~K~~--~vavHyR~ad~~~~---------  248 (366)
T PLN03017        185 AKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKS-----TPGAKVENHKF--CASVHFRCVDEKKW---------  248 (366)
T ss_pred             CCcceeccccccccccccchhhHHHHHHHHHHHHHHHhc-----CCCCEEEecCc--EEEEEcCcCCHHHH---------
Confidence             221110      00100000 12334444444443211     34667664332  22233343322110         


Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeC-CCCHHHHHHHhhc-c-------CCEEEEcCCCCCCCCCHHHHhh
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQ-GWDKTYCLRYLDD-F-------NEIHFFGDKTYKGGNDHEIFES  222 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~-~~~K~~al~~l~~-~-------~~~~aiGD~~~~~~NDi~M~~~  222 (248)
                      .+.. .....+...++++  .... |...+|+.|. ++|||.|+++|++ .       .-.++|||    +..|.+||+.
T Consensus       249 ~~l~-~~~~~vl~~~~~l--~v~~-GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGD----D~TDEDaF~~  320 (366)
T PLN03017        249 SELV-LQVRSVLKNFPTL--KLTQ-GRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGD----DRTDEDAFKM  320 (366)
T ss_pred             HHHH-HHHHHHHHhCCCc--EEeC-CCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCC----CCccHHHHHH
Confidence            0011 1223344455654  3333 6899999995 9999999999997 1       14899999    9999999995


Q ss_pred             C-----CCceEEccCchhhHHHHhhhhcc
Q 038498          223 E-----RTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       223 ~-----g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      .     | .+|.|+..+.+  ..|.|.++
T Consensus       321 L~~~~~G-~gI~VG~~~k~--T~A~y~L~  346 (366)
T PLN03017        321 LRDRGEG-FGILVSKFPKD--TDASYSLQ  346 (366)
T ss_pred             HhhcCCc-eEEEECCCCCC--CcceEeCC
Confidence            4     5 78888863322  34444443

>PLN02151 trehalose-phosphatase

Probab=99.79  E-value=1.2e-17  Score=143.52  Aligned_cols=198  Identities=19%  Similarity=0.263  Sum_probs=126.6

Q ss_pred             ccceEEEEecCCCCC----CCCC-CCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC
Q 038498            5 KQGLLALFDVDGTLT----APRK-AATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD   79 (248)
Q Consensus         5 ~~~kli~~DlDGTLl----~~~~-~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~   79 (248)
                      .+..++|+|+||||+    +++. .++++++++|++|.+...++|+|||++..+.+.++.   ..+ ++++++|+.+...
T Consensus        96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~---~~l-~laGsHG~e~~~p  171 (354)
T PLN02151         96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKL---TEL-YYAGSHGMDIKGP  171 (354)
T ss_pred             CCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCC---ccc-eEEEeCCceeecC
Confidence            356899999999999    4444 689999999999995588999999999999988874   223 7889999998752


Q ss_pred             --CcEEE-E---eecccccc---hHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccc
Q 038498           80 --GKLIG-T---QSLKSFLG---GEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDK  150 (248)
Q Consensus        80 --~~~i~-~---~~~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (248)
                        +.... .   ...+  ..   ...+.++.+.+.+....     ..|.++|....  .+..+++..+....        
T Consensus       172 ~~g~~~~~~~~~~~~~--~~~~~~~~i~~v~~~l~~~~~~-----~pG~~VE~K~~--slavHYR~a~~~~~--------  234 (354)
T PLN02151        172 EQGSKYKKENQSLLCQ--PATEFLPVINEVYKKLVEKTKS-----IPGAKVENNKF--CASVHFRCVEENKW--------  234 (354)
T ss_pred             CCCccccccccccccc--cchhhHHHHHHHHHHHHHHHhc-----CCCCEEEecCc--EEEEEeCCCChHHH--------
Confidence              21110 0   0010  01   12233344444332111     34667664332  22233343322100        


Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeC-CCCHHHHHHHhhc----c----CCEEEEcCCCCCCCCCHHHHh
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQ-GWDKTYCLRYLDD----F----NEIHFFGDKTYKGGNDHEIFE  221 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~-~~~K~~al~~l~~----~----~~~~aiGD~~~~~~NDi~M~~  221 (248)
                       .+.. .....+...++++  .... |...+|+.|. ++|||.|++.|++    .    .-+++|||    +..|.+||+
T Consensus       235 -~~l~-~~l~~v~~~~~~l--~v~~-GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGD----D~TDEDaF~  305 (354)
T PLN02151        235 -SDLA-NQVRSVLKNYPKL--MLTQ-GRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGD----DRTDEDAFK  305 (354)
T ss_pred             -HHHH-HHHHHHHhhCCCc--EEec-CCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcC----CCcHHHHHH
Confidence             0011 2223444555654  3333 6899999995 9999999999997    1    12899999    999999999


Q ss_pred             hC-----CCceEEccCc
Q 038498          222 SE-----RTVGHTVTSP  233 (248)
Q Consensus       222 ~~-----g~~~~av~Na  233 (248)
                      ..     | .++.|+..
T Consensus       306 ~L~~~~~G-~gI~Vg~~  321 (354)
T PLN02151        306 ILRDKKQG-LGILVSKY  321 (354)
T ss_pred             HHhhcCCC-ccEEeccC
Confidence            53     5 67888753

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=99.78  E-value=1.2e-17  Score=138.16  Aligned_cols=213  Identities=22%  Similarity=0.243  Sum_probs=108.2

Q ss_pred             EEecCCCCCCCCC-----CCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498           11 LFDVDGTLTAPRK-----AATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus        11 ~~DlDGTLl~~~~-----~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      |+|+||||.+-..     .++++++++|++|.+.  ..|+|+|||+...+....+.   ..+ +++++||+.+...+...
T Consensus         1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~---~~i-~l~gehG~e~~~~~~~~   76 (235)
T PF02358_consen    1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGI---PNI-GLAGEHGAEIRRPGGSE   76 (235)
T ss_dssp             EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S----SS--EEEEGGGTEEEETTE-E
T ss_pred             CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCC---CCc-eEEEEeeEEeccCcccc
Confidence            6999999997643     5789999999999988  78999999999994444443   233 78999999999866533


Q ss_pred             EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHH
Q 038498           84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLR  163 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  163 (248)
                      ...... ....++.+.+.+.++.+...     ..|.+++.+..-+  ..+++.+......    . ...+..+.+ ..+.
T Consensus        77 ~~~~~~-~~~~~~~~~~~~~l~~~~~~-----~pG~~iE~K~~sv--~~Hyr~~~~~~~~----~-~~~~l~~~l-~~~~  142 (235)
T PF02358_consen   77 WTNLPA-DEDLEWKDEVREILEYFAER-----TPGSFIEDKEFSV--AFHYRNAPPEFGE----A-QARELAEQL-REIL  142 (235)
T ss_dssp             EE-TTG-GGGHHHHHHHHHHHTTHHHH-----STT-EEEEETTEE--EEE-TTS-ST---------THHHHHHHH-HHHH
T ss_pred             cccccc-ccchHHHHHHHHHHHHHHhh-----ccCcEEEECCeEE--EEEecCCCcchhh----h-HHHHHHHHH-HHHH
Confidence            332111 12334555555555554222     3566776543322  2233332211000    0 000111122 2223


Q ss_pred             HHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--c------CCEEEEcCCCCCCCCCHHHHhhCCC-----ceEEc
Q 038498          164 EKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--F------NEIHFFGDKTYKGGNDHEIFESERT-----VGHTV  230 (248)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~------~~~~aiGD~~~~~~NDi~M~~~~g~-----~~~av  230 (248)
                      ...++  +.... |...+|+.|.+.+||.|++.|++  .      +-++++||    +..|.+||+...-     .++-|
T Consensus       143 ~~~~~--~~v~~-g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GD----D~tDE~~f~~~~~~~~~~~~i~V  215 (235)
T PF02358_consen  143 ASHPG--LEVVP-GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGD----DRTDEDAFRALRELEEGGFGIKV  215 (235)
T ss_dssp             HHH-T---EEEE--SSEEEEE-TT--HHHHHHHHHTTS---------EEEEES----SHHHHHHHHTTTTS----EEEEE
T ss_pred             HhCCC--EEEEE-CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecC----CCCCHHHHHHHHhcccCCCCeEE
Confidence            33344  44444 57899999999999999999997  2      36999999    9999999997531     57777


Q ss_pred             cCch-hhHHHHhhhhccCC
Q 038498          231 TSPE-DTMEKCKALFLAKP  248 (248)
Q Consensus       231 ~Na~-~~~k~~A~~v~~~~  248 (248)
                      +..+ .+.+..|+|-++.|
T Consensus       216 ~~~~~~~~~t~A~y~l~~p  234 (235)
T PF02358_consen  216 GSVSVGEKPTAASYRLDDP  234 (235)
T ss_dssp             S------------------
T ss_pred             EeecccccccccccccccC
Confidence            7754 56778888877766

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=99.73  E-value=1e-15  Score=126.93  Aligned_cols=190  Identities=22%  Similarity=0.310  Sum_probs=128.4

Q ss_pred             ccceEEEEecCCCCCCCC-----CCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEE
Q 038498            5 KQGLLALFDVDGTLTAPR-----KAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAH   77 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~-----~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~   77 (248)
                      .+.+++++|+||||.+--     ..++++++++|++|..+  ..+++.|||+...+...++.   ... +++++||+++.
T Consensus        16 a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v---~~i-~l~aehGa~~r   91 (266)
T COG1877          16 ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGV---PGI-GLIAEHGAEVR   91 (266)
T ss_pred             ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCC---CCc-cEEEecceEEe
Confidence            467999999999999642     24689999999999999  68999999999999988884   223 79999999996


Q ss_pred             e-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchH
Q 038498           78 K-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRP  156 (248)
Q Consensus        78 ~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (248)
                      + +|+.......+  ....+.+++.+.++.+..+     ..|.|++.....+.  .+++.+..+..           ...
T Consensus        92 ~~~g~~~~~~~~~--~~~~~~~~v~~~l~~~v~r-----~pGs~iE~K~~a~~--~Hyr~a~~~~~-----------~~~  151 (266)
T COG1877          92 DPNGKWWINLAEE--ADLRWLKEVAAILEYYVER-----TPGSYIERKGFAVA--LHYRNAEDDEG-----------AAL  151 (266)
T ss_pred             cCCCCeeEecCHH--HHhhHHHHHHHHHHHHhhc-----CCCeEEEEcCcEEE--EeeccCCchhh-----------HHH
Confidence            6 77775444321  1122233555555555222     45777775443322  23333322111           011


Q ss_pred             HHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc---cC--CEEEEcCCCCCCCCCHHHHhhCC
Q 038498          157 KMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD---FN--EIHFFGDKTYKGGNDHEIFESER  224 (248)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~---~~--~~~aiGD~~~~~~NDi~M~~~~g  224 (248)
                      ..........+ ..+.... |...+|+.|.++|||.+++++++   .+  -+++.||    +.-|..||+++.
T Consensus       152 a~~~~~~~~~~-~~~~v~~-gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGD----D~TDE~~F~~v~  218 (266)
T COG1877         152 ALAEAATLINE-LKLRVTP-GKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGD----DLTDEDAFAAVN  218 (266)
T ss_pred             HHHHHHhcccc-ccEEEEe-CceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCC----CCccHHHHHhhc
Confidence            11111112112 1155555 68999999999999999999997   32  4999999    999999999875

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.68  E-value=3e-15  Score=142.54  Aligned_cols=193  Identities=17%  Similarity=0.197  Sum_probs=125.4

Q ss_pred             ccceEEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCc
Q 038498            5 KQGLLALFDVDGTLTAPRK--------AATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGL   74 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa   74 (248)
                      .+.+++++|+||||++...        .++++++++|++|.+.  ..|+|+|||+...+.+.++.   ..+ +++++||+
T Consensus       505 a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~---~~l-~l~aeHG~  580 (797)
T PLN03063        505 SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE---YNI-WLAAENGM  580 (797)
T ss_pred             ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC---CCC-cEEEeCCE
Confidence            4568999999999996522        3688999999999988  89999999999999999985   123 78999999


Q ss_pred             EEEe-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhcccccc
Q 038498           75 VAHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHN  153 (248)
Q Consensus        75 ~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (248)
                      .+.. ++++..  .++..++.++.+.+...++.+...     ..|.++|.+..-  +..+++....+.-         ..
T Consensus       581 ~~r~~~~~w~~--~~~~~~~~~w~~~v~~~l~~~~~r-----tpGs~iE~K~~s--la~HyR~adp~~g---------~~  642 (797)
T PLN03063        581 FLRHTSGEWVT--TMPEHMNLDWVDGVKNVFKYFTDR-----TPRSYVEKSETS--LVWNYEYADVEFG---------RA  642 (797)
T ss_pred             EEecCCCceee--ccccccChhHHHHHHHHHHHHHHh-----CCCcEEEEcCeE--EEEEcCCCChHHH---------HH
Confidence            9765 444421  111112334444444555554222     457787754432  2233333311100         00


Q ss_pred             chHHHHHHHHHHc-CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----------cCCEEEEcCCCCCCC-CCHHHH
Q 038498          154 IRPKMVSVLREKF-AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----------FNEIHFFGDKTYKGG-NDHEIF  220 (248)
Q Consensus       154 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----------~~~~~aiGD~~~~~~-NDi~M~  220 (248)
                      ...++...+.+.. ++..+.+.. |...+|+.|.++|||.|++.+++           .+-++++||    +. -|-+||
T Consensus       643 ~a~el~~~l~~~~~~~~~~~v~~-Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd----d~~~DEdmF  717 (797)
T PLN03063        643 QARDMLQHLWAGPISNASVDVVR-GQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY----FLEKDEDVY  717 (797)
T ss_pred             HHHHHHHHHHHhhccCCCcEEEE-CCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC----CCCCcHHHH
Confidence            1123333442321 222344444 68999999999999999999985           256999999    85 499999


Q ss_pred             hhCC
Q 038498          221 ESER  224 (248)
Q Consensus       221 ~~~g  224 (248)
                      ++.+
T Consensus       718 ~~l~  721 (797)
T PLN03063        718 TFFE  721 (797)
T ss_pred             Hhcc
Confidence            9654

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.68  E-value=3e-15  Score=142.62  Aligned_cols=192  Identities=19%  Similarity=0.230  Sum_probs=125.0

Q ss_pred             ccceEEEEecCCCCCCCC--------------CCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceE
Q 038498            5 KQGLLALFDVDGTLTAPR--------------KAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYV   68 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~   68 (248)
                      .+.+++++|+||||++..              ..++++++++|++|.+.  ..|+|+|||+...+.+.++..   .+ ++
T Consensus       589 a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~---~L-~L  664 (934)
T PLN03064        589 SNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF---DM-WL  664 (934)
T ss_pred             ccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC---Cc-eE
Confidence            456899999999999631              13678899999999988  899999999999999999861   23 78


Q ss_pred             EecCCcEEEe-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhh
Q 038498           69 FSENGLVAHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFER  147 (248)
Q Consensus        69 i~~nGa~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (248)
                      +++||+.+.. ++++..  .++..++.++.+.+...++.+...     ..|.++|.+..-  +.++++....+.-     
T Consensus       665 aAEHG~~~R~~~~~w~~--~~~~~~~~~W~~~v~~ile~~~eR-----tPGS~IE~K~~S--LawHYR~ADpe~g-----  730 (934)
T PLN03064        665 AAENGMFLRHTKGEWMT--TMPEHLNMDWVDSVKHVFEYFTER-----TPRSHFETRETS--LVWNYKYADVEFG-----  730 (934)
T ss_pred             EeeCCeEEecCCCccee--ccccccchHHHHHHHHHHHHHHhc-----CCCcEEEEcCcE--EEEEecCCChhhH-----
Confidence            9999999766 444421  122112334444444444444222     457787754432  2233333211100     


Q ss_pred             ccccccchHHHHHHHHHH-cCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----------cCCEEEEcCCCCCCCC
Q 038498          148 YDKIHNIRPKMVSVLREK-FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----------FNEIHFFGDKTYKGGN  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----------~~~~~aiGD~~~~~~N  215 (248)
                          .....++...+.+. +.+..+.+.. |...+|+.|.++|||.|++.+++           ++-++++||    +..
T Consensus       731 ----~~qA~el~~~L~~~~~~~~~v~V~~-Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GD----d~~  801 (934)
T PLN03064        731 ----RLQARDMLQHLWTGPISNAAVDVVQ-GSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGH----FLG  801 (934)
T ss_pred             ----HHHHHHHHHHHHhhhccCCCcEEEe-CCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCC----CCC
Confidence                00111233334222 1122344444 68999999999999999999996           356999999    986


Q ss_pred             -CHHHHhhC
Q 038498          216 -DHEIFESE  223 (248)
Q Consensus       216 -Di~M~~~~  223 (248)
                       |-+||++.
T Consensus       802 ~DEdmF~~l  810 (934)
T PLN03064        802 KDEDIYTFF  810 (934)
T ss_pred             CcHHHHHHH
Confidence             99999964

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.61  E-value=8.3e-15  Score=115.57  Aligned_cols=213  Identities=18%  Similarity=0.129  Sum_probs=118.1

Q ss_pred             CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC
Q 038498            1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD   79 (248)
Q Consensus         1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~   79 (248)
                      |-++..+++||+||||||+++... .+.....|.+|++. +.|+++|.++..++...... +.....++|++||+.||-.
T Consensus         1 m~s~~~~~lIFtDlD~TLl~~~ye-~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~-l~v~~~p~iaEnG~aI~~p   78 (274)
T COG3769           1 MFSIQMPLLIFTDLDGTLLPHSYE-WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKS-LGVQGLPLIAENGAAIYLP   78 (274)
T ss_pred             CCccccceEEEEcccCcccCCCCC-CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHh-cCCCCCceeecCCceEEec
Confidence            445678899999999999995333 44557788899999 99999999998764433332 1223358999999999852


Q ss_pred             Cc---------EEEEeeccc-ccchHHHHHHHHHHHHhhcccccccccccccee-ccccceecccCCCC-Chhhhhhhhh
Q 038498           80 GK---------LIGTQSLKS-FLGGEKLKEFINFTLHYIADLDIPIKRGTFIEF-RSGMLNISPIGRNC-SQEERDEFER  147 (248)
Q Consensus        80 ~~---------~i~~~~~~~-~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~  147 (248)
                      ..         .+....... -+.-+.+.+.++.++..   +++..    |..- ......+.-..++. +.....++..
T Consensus        79 ~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~---~g~~~----~~~~d~~ei~e~TGlpre~aaLa~~rEyse  151 (274)
T COG3769          79 KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEH---FGFTT----FDDVDDEEIAEWTGLPREQAALAMLREYSE  151 (274)
T ss_pred             ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHH---hCeeE----eccCCHHHHHHHhCCChHHhHHHHHHHhhh
Confidence            22         111111100 01123333333333332   11110    1000 00000000000000 0000011110


Q ss_pred             --cccc-ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc------cCC-EEEEcCCCCCCCCCH
Q 038498          148 --YDKI-HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD------FNE-IHFFGDKTYKGGNDH  217 (248)
Q Consensus       148 --~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~------~~~-~~aiGD~~~~~~NDi  217 (248)
                        +--. .+....+...|.+.    .+.+.-| ..+--+.-....||.|++.+++      ..+ +++.||    +.||+
T Consensus       152 ti~~rs~d~~~~~~~~~L~e~----glt~v~g-arf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GD----g~nD~  222 (274)
T COG3769         152 TIIWRSSDERMAQFTARLNER----GLTFVHG-ARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGD----GPNDA  222 (274)
T ss_pred             heeecccchHHHHHHHHHHhc----CceEEec-cceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCC----CCCcc
Confidence              0000 11222344445443    2555543 4455566667779999999997      344 999999    99999


Q ss_pred             HHHhhCCCceEEccC
Q 038498          218 EIFESERTVGHTVTS  232 (248)
Q Consensus       218 ~M~~~~g~~~~av~N  232 (248)
                      +||+... +++.|++
T Consensus       223 Pl~ev~d-~AfiV~~  236 (274)
T COG3769         223 PLLEVMD-YAFIVKG  236 (274)
T ss_pred             cHHHhhh-hheeecc
Confidence            9999997 9999996

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.48  E-value=6.9e-15  Score=126.36  Aligned_cols=55  Identities=16%  Similarity=0.247  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +..|+.+++.+++     ++++++|||    +.||++|++.+| .++|| ||.|.+|+.|+.++..
T Consensus       246 ~k~K~~~L~~la~~lgi~~~qtIaVGD----g~NDl~m~~~AG-lgiA~-nAkp~Vk~~Ad~~i~~  305 (322)
T PRK11133        246 AQYKADTLTRLAQEYEIPLAQTVAIGD----GANDLPMIKAAG-LGIAY-HAKPKVNEQAQVTIRH  305 (322)
T ss_pred             cccHHHHHHHHHHHcCCChhhEEEEEC----CHHHHHHHHHCC-CeEEe-CCCHHHHhhCCEEecC
Confidence            4689999999996     789999999    999999999999 99999 9999999999998754

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.41  E-value=9.1e-13  Score=103.06  Aligned_cols=43  Identities=14%  Similarity=0.181  Sum_probs=40.6

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ++++++|||    +.||++|++.+| .++||+||.+.+|++|++|+.+
T Consensus        98 ~~ev~~iGD----~~nDi~~~~~ag-~~~am~nA~~~lk~~A~~I~~~  140 (169)
T TIGR02726        98 DAEVCYVGD----DLVDLSMMKRVG-LAVAVGDAVADVKEAAAYVTTA  140 (169)
T ss_pred             HHHEEEECC----CHHHHHHHHHCC-CeEECcCchHHHHHhCCEEcCC
Confidence            568999999    999999999999 9999999999999999999854

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.41  E-value=6.5e-13  Score=102.70  Aligned_cols=44  Identities=11%  Similarity=0.127  Sum_probs=41.7

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      +++++++||    +.||++|++.+| .+++|.|+.+.+++.|++++.+|
T Consensus        92 ~~~~~~vGD----s~~D~~~~~~ag-~~~~v~~~~~~~~~~a~~i~~~~  135 (154)
T TIGR01670        92 PENVAYIGD----DLIDWPVMEKVG-LSVAVADAHPLLIPRADYVTRIA  135 (154)
T ss_pred             HHHEEEECC----CHHHHHHHHHCC-CeEecCCcCHHHHHhCCEEecCC
Confidence            678999999    999999999999 99999999999999999999776

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.39  E-value=6.1e-13  Score=105.80  Aligned_cols=42  Identities=12%  Similarity=0.153  Sum_probs=39.4

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      ++++++|||    +.||++|++.+| .+++|+++.+.++..|++|+.
T Consensus       112 ~~ev~~VGD----s~~D~~~a~~aG-~~~~v~~~~~~~~~~a~~v~~  153 (183)
T PRK09484        112 PEQVAYIGD----DLIDWPVMEKVG-LSVAVADAHPLLLPRADYVTR  153 (183)
T ss_pred             HHHEEEECC----CHHHHHHHHHCC-CeEecCChhHHHHHhCCEEec
Confidence            679999999    999999999999 889999999999999999885

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=99.35  E-value=2e-11  Score=117.41  Aligned_cols=197  Identities=18%  Similarity=0.195  Sum_probs=111.4

Q ss_pred             ceEEE--EecCCCCCCCCCCCCHHHHHHHHHHh----hc-CeEEEEcCCChHHHHHHhcccccC--CCceEEecCCcEEE
Q 038498            7 GLLAL--FDVDGTLTAPRKAATPQMLEFMRELR----KV-VTVGVVGGSDLSKISEQLGKTVID--EYDYVFSENGLVAH   77 (248)
Q Consensus         7 ~kli~--~DlDGTLl~~~~~i~~~~~~al~~l~----~~-~~v~iaTGR~~~~~~~~l~~~~~~--~~~~~i~~nGa~i~   77 (248)
                      .++++  +|+|+| +.    ..+...+.++.++    .. +.|+++|||++.++.+.+...-.+  .||.+||.-|+.||
T Consensus       770 ~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIy  844 (1050)
T TIGR02468       770 KRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELY  844 (1050)
T ss_pred             ceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCccee
Confidence            45555  999999 21    2333334444444    23 899999999999988877663223  68999999999999


Q ss_pred             eC-------CcEEEEeecccccc----hHHHHHHHHHHHHhhccccccccccc-----ccee--ccccceecccCCCCCh
Q 038498           78 KD-------GKLIGTQSLKSFLG----GEKLKEFINFTLHYIADLDIPIKRGT-----FIEF--RSGMLNISPIGRNCSQ  139 (248)
Q Consensus        78 ~~-------~~~i~~~~~~~~i~----~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~  139 (248)
                      +.       +.......|..+|+    .+.+...+..+...   +  ..+.+.     ..+.  .+....+         
T Consensus       845 y~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~---~--~~~~~~~~~~l~~Q~~~~q~~~k~---------  910 (1050)
T TIGR02468       845 YPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAAS---I--NEKKGENEEQIVEEDEESSTDHCY---------  910 (1050)
T ss_pred             ccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhh---c--ccccccccccceecChhhCCCceE---------
Confidence            84       34444433332232    22233222211111   0  000000     0000  0000111         


Q ss_pred             hhhhhhhhcccc-ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCE-EEEcCCCCC
Q 038498          140 EERDEFERYDKI-HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEI-HFFGDKTYK  212 (248)
Q Consensus       140 ~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~-~aiGD~~~~  212 (248)
                          .|+..+.. ....+++.+.|..+--+..+.++. +...+||+|..+||+.||++|+.     .+++ ++.||    
T Consensus       911 ----SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~-~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGd----  981 (1050)
T TIGR02468       911 ----AFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCR-NGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGE----  981 (1050)
T ss_pred             ----EEEecCcccCccHHHHHHHHHhCCCceEEEeec-CCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEecc----
Confidence                11111111 112345555555543234455553 35899999999999999999996     6777 55999    


Q ss_pred             CCC-CHH-HHhhCCCceEEccC
Q 038498          213 GGN-DHE-IFESERTVGHTVTS  232 (248)
Q Consensus       213 ~~N-Di~-M~~~~g~~~~av~N  232 (248)
                      ++| |++ |+.-.. .+|.+..
T Consensus       982 SGntD~e~Ll~G~~-~tvi~~g 1002 (1050)
T TIGR02468       982 SGDTDYEGLLGGLH-KTVILKG 1002 (1050)
T ss_pred             CCCCCHHHHhCCce-eEEEEec
Confidence            999 966 655554 7777655

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>smart00775 LNS2 LNS2 domain

Probab=99.28  E-value=1.1e-11  Score=96.04  Aligned_cols=93  Identities=12%  Similarity=0.170  Sum_probs=66.0

Q ss_pred             EEEEecCCCCCCCC-----------CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHH---HHhcc----cccCCCceEE
Q 038498            9 LALFDVDGTLTAPR-----------KAATPQMLEFMRELRKV-VTVGVVGGSDLSKIS---EQLGK----TVIDEYDYVF   69 (248)
Q Consensus         9 li~~DlDGTLl~~~-----------~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~---~~l~~----~~~~~~~~~i   69 (248)
                      +|++|+||||++++           ..+++.+.+++++++++ ++++++|||++....   +.+..    ....+..+++
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li   80 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL   80 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence            48999999999998           67899999999999999 999999999987542   33322    0012235899


Q ss_pred             ecCCcEEEe-CCcEEEEeecccccchHHHHHHHHH
Q 038498           70 SENGLVAHK-DGKLIGTQSLKSFLGGEKLKEFINF  103 (248)
Q Consensus        70 ~~nGa~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~  103 (248)
                      +.||+.+.. .++.+...+.  .+..+.++.+.+.
T Consensus        81 ~~~g~~~~~~~~e~i~~~~~--~~K~~~l~~i~~~  113 (157)
T smart00775       81 LSPDRLFAALHREVISKKPE--VFKIACLRDIKSL  113 (157)
T ss_pred             EcCCcchhhhhcccccCCHH--HHHHHHHHHHHHh
Confidence            999999875 5566655542  1233444444443

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=99.25  E-value=1.5e-10  Score=98.64  Aligned_cols=208  Identities=20%  Similarity=0.248  Sum_probs=124.1

Q ss_pred             cceEEEEecCCCCCCCCCCC--CHHHHHHHHHHhhc-CeEEEEcCCChHH----------HHHHhccc--c---------
Q 038498            6 QGLLALFDVDGTLTAPRKAA--TPQMLEFMRELRKV-VTVGVVGGSDLSK----------ISEQLGKT--V---------   61 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i--~~~~~~al~~l~~~-~~v~iaTGR~~~~----------~~~~l~~~--~---------   61 (248)
                      +.+||-||=|+||.++++.+  +..++..|-+|.++ +.|+|+|.-.|+.          +...+...  +         
T Consensus       146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~qk~~l~  225 (408)
T PF06437_consen  146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQKSNLY  225 (408)
T ss_pred             CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHHhcCEE
Confidence            89999999999999998887  77889999999999 9999999999863          22222211  0         


Q ss_pred             --cCCCceEEecCCc----EEEe-CCcEEEEeecccccchHHHHHHHHHHHHhhc----cccccccccccceecccccee
Q 038498           62 --IDEYDYVFSENGL----VAHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIA----DLDIPIKRGTFIEFRSGMLNI  130 (248)
Q Consensus        62 --~~~~~~~i~~nGa----~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  130 (248)
                        .++.+|+.-.+-.    +.+. +.++......  .|+.+++.++++..+....    .+.+|.    -+-...+.+.+
T Consensus       226 VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~--~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa----~IiRK~RAVGi  299 (408)
T PF06437_consen  226 VMGGESNYLFRYDPESPHGLEFVPREEWLLPEMK--TWSEEDITELLDIAEAALRDCVKRLNLPA----TIIRKERAVGI  299 (408)
T ss_pred             EecccceeEEEecCCCCCCeEEccHHhccCcccc--CcCHHHHHHHHHHHHHHHHHHHHHcCCCe----eEEeecceeeE
Confidence              1112222222221    1111 2223322222  3678899999888777522    233331    11111222222


Q ss_pred             cccCC-CCChhhhhhhhhccccccchHHHHHHHHHHc----CCce---EEEEecCceEEEEeeCCCCHHHHHHHhhc---
Q 038498          131 SPIGR-NCSQEERDEFERYDKIHNIRPKMVSVLREKF----AHLN---LTFSIGGQISFDVFPQGWDKTYCLRYLDD---  199 (248)
Q Consensus       131 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~---~~~~~~~~~~~di~~~~~~K~~al~~l~~---  199 (248)
                      .|... .+             ..+..|+.+-.++..+    ++-.   |.+..|.    |++-.=.+|..|++.+++   
T Consensus       300 vP~~~~ki-------------~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGs----DVwVDIGdKs~GV~~lQ~y~~  362 (408)
T PF06437_consen  300 VPKPGVKI-------------IREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGS----DVWVDIGDKSLGVRALQKYFD  362 (408)
T ss_pred             ecCCCCcc-------------hhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCc----ceEEEcCCcHHhHHHHHHHHH
Confidence            23110 00             1123344433333332    2112   3344333    444455788888888775   


Q ss_pred             ------cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCchhhHH
Q 038498          200 ------FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPEDTME  238 (248)
Q Consensus       200 ------~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~~~~k  238 (248)
                            +.+++++||+|...+ ||+..-.++  ..++++|+.+.+.
T Consensus       363 ~~~~i~~~~tLHVGDQF~s~GaNDfkaR~a~--~t~WIasP~ETv~  406 (408)
T PF06437_consen  363 PEGGIKPSETLHVGDQFLSAGANDFKARLAC--TTAWIASPQETVE  406 (408)
T ss_pred             hccCCCccceeeehhhhhccCCcchhhhhhc--eeeEecCHHHHhh
Confidence                  789999999999999 999987654  7999999988653

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=99.03  E-value=9.5e-10  Score=81.52  Aligned_cols=46  Identities=15%  Similarity=0.274  Sum_probs=39.3

Q ss_pred             ceEEEEecCCCCCCCCC------CCCHHHHHHHHHHhhc-CeEEEEcCCChHH
Q 038498            7 GLLALFDVDGTLTAPRK------AATPQMLEFMRELRKV-VTVGVVGGSDLSK   52 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~   52 (248)
                      +|+|+||+||||+..+.      .+.+.++++|++++++ +.|+++|||+...
T Consensus         1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~   53 (126)
T TIGR01689         1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRT   53 (126)
T ss_pred             CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence            37999999999997642      2568899999999999 9999999999764

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.00  E-value=1.3e-09  Score=81.10  Aligned_cols=51  Identities=25%  Similarity=0.432  Sum_probs=44.2

Q ss_pred             EEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498            9 LALFDVDGTLTAPRK--------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK   59 (248)
Q Consensus         9 li~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~   59 (248)
                      +++||+||||+....        .+.+.+.+.|++|+++ +.++++|||....+...+..
T Consensus         1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~   60 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE   60 (139)
T ss_pred             CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH
Confidence            489999999999875        7889999999999999 99999999997766665553

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=98.98  E-value=1.7e-08  Score=94.72  Aligned_cols=187  Identities=20%  Similarity=0.198  Sum_probs=120.8

Q ss_pred             ccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498            3 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG   80 (248)
Q Consensus         3 ~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~   80 (248)
                      .+.+.++|++|.|||++...+..   +...|+.|...  ..+.|++||+...+..-+..  .... +++++||+.+...+
T Consensus       499 ~~s~~rli~ldyd~t~~~~~~~~---~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~--~~~l-gl~aEhG~f~r~~~  572 (732)
T KOG1050|consen  499 KKSKKRLILLDYDLTLIPPRSIK---AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFG--CKNL-GLAAEHGYFVRIPG  572 (732)
T ss_pred             hhccceEEEecccccccCCCCch---HHHHHHHHhcCCCCeEEEEEccCchhhhhhccc--cccc-eeecccCceeccCC
Confidence            45788999999999999875543   88889998888  89999999998877665543  1223 88999999998865


Q ss_pred             cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHH
Q 038498           81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVS  160 (248)
Q Consensus        81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (248)
                      .+  ...+.   +.++.+.+-+.++.|..+     ++|+|++.......  +.++.+.. ++        ......++..
T Consensus       573 ~w--~~~~~---~~~w~~~v~~i~~~~~er-----t~GS~ie~k~~~l~--~hy~~ad~-~~--------g~~qA~el~~  631 (732)
T KOG1050|consen  573 KW--ETCVL---DLDWKDLVKDIFQYYTER-----TPGSYIERKETALV--WHYRNADP-EF--------GELQAKELLE  631 (732)
T ss_pred             ce--eeecc---cccHHHHHHHHHHHHHhc-----CCCceecccCceEE--EeeeccCc-ch--------hHHHHHHHHH
Confidence            53  33221   223322222223332111     56778775443321  22222211 10        0001112223


Q ss_pred             HHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          161 VLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       161 ~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      .|..  .+..+.... |...+++-|.+++||.++..+..     ++-++++||    ..-|-+||...
T Consensus       632 ~l~~--~~~~~~v~~-g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c~g~----d~tDed~~~~~  692 (732)
T KOG1050|consen  632 HLES--KNEPVEVVR-GKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLCIGD----DRTDEDMFEFI  692 (732)
T ss_pred             Hhcc--cCCCeEEEe-cCceEEEcccccchHHHHHHHHHhcCCCcceEEEecC----CCChHHHHHHH
Confidence            3333  233455555 58999999999999999999985     577999999    99999999953

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.97  E-value=3.3e-09  Score=86.15  Aligned_cols=89  Identities=20%  Similarity=0.262  Sum_probs=60.6

Q ss_pred             cccchHHHHHHHHHHcCC---c--eEEEEec--CceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHH
Q 038498          151 IHNIRPKMVSVLREKFAH---L--NLTFSIG--GQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHE  218 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~---~--~~~~~~~--~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~  218 (248)
                      ++.-...++..+.+.++-   +  .+....|  +...+-..-.+-+|...++.+++     +++++|+||    |.||++
T Consensus        99 iSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gD----s~nDlp  174 (212)
T COG0560          99 ISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGD----SANDLP  174 (212)
T ss_pred             EcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcC----chhhHH
Confidence            344455667777777641   1  1111110  11222334445579999999886     679999999    999999


Q ss_pred             HHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          219 IFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       219 M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      ||+.+| +++++ |+.+.+++.|+.-.
T Consensus       175 ml~~ag-~~ia~-n~~~~l~~~a~~~~  199 (212)
T COG0560         175 MLEAAG-LPIAV-NPKPKLRALADVRI  199 (212)
T ss_pred             HHHhCC-CCeEe-CcCHHHHHHHHHhc
Confidence            999999 99987 67778888887543

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=98.94  E-value=1.3e-09  Score=88.71  Aligned_cols=46  Identities=13%  Similarity=-0.059  Sum_probs=36.8

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      +...-.|...++++++     ++++++|||    +.+|+.+.+.+|+.++++..+
T Consensus       134 ~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGD----s~~Di~aa~~aG~~~i~v~~g  184 (214)
T PRK13288        134 VEHAKPDPEPVLKALELLGAKPEEALMVGD----NHHDILAGKNAGTKTAGVAWT  184 (214)
T ss_pred             CCCCCCCcHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHCCCeEEEEcCC
Confidence            3445566777777775     789999999    999999999999878877654

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.91  E-value=7.1e-09  Score=86.43  Aligned_cols=70  Identities=21%  Similarity=0.245  Sum_probs=55.0

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhccc-ccCCCceEEecCCcEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGKT-VIDEYDYVFSENGLVAH   77 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~   77 (248)
                      +|+++||+||||++.+..++ .+.++|++|+++ +.++++||   |+...+.+.+... +....+.+++.+|+...
T Consensus         1 ~~~~~~D~DGtl~~~~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~   75 (249)
T TIGR01457         1 YKGYLIDLDGTMYKGKERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD   75 (249)
T ss_pred             CCEEEEeCCCceEcCCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence            47899999999999877666 789999999999 99999995   8887766555541 23345678888887643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.82  E-value=1.4e-08  Score=84.93  Aligned_cols=72  Identities=21%  Similarity=0.349  Sum_probs=54.9

Q ss_pred             cceEEEEecCCCCCCCCCCC---CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe
Q 038498            6 QGLLALFDVDGTLTAPRKAA---TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK   78 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i---~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~   78 (248)
                      ..++|+|||||||+++...+   ++.+.++|.+|+++ +.++++|+++...+.+.+... +..-++ +|.++|.....
T Consensus       125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd-vIIs~Gdv~~~  201 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD-IIISGGHKAEE  201 (301)
T ss_pred             cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC-EEEECCccccC
Confidence            56899999999999997765   69999999999999 999999988877655544441 222343 55667766443

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.76  E-value=6.9e-08  Score=78.71  Aligned_cols=53  Identities=19%  Similarity=0.251  Sum_probs=46.4

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      .|...++.+++     ++++++|||    +.||+++++.+| .++++ |+.+.++..|+++..+
T Consensus       152 ~k~~~~~~~~~~~~~~~~~~i~iGD----s~~Di~aa~~ag-~~i~~-~~~~~~~~~a~~~i~~  209 (219)
T TIGR00338       152 YKGKTLLILLRKEGISPENTVAVGD----GANDLSMIKAAG-LGIAF-NAKPKLQQKADICINK  209 (219)
T ss_pred             ccHHHHHHHHHHcCCCHHHEEEEEC----CHHHHHHHHhCC-CeEEe-CCCHHHHHhchhccCC
Confidence            48888888775     678999999    999999999999 89987 6889999999998754

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.70  E-value=6.3e-09  Score=78.37  Aligned_cols=55  Identities=18%  Similarity=0.198  Sum_probs=47.6

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      .+|-.+.+.|++     ++++.++||    +.||+++|+.+| .++||++|++++++.|++|+.+
T Consensus        82 ~dK~~a~~~L~~~~~l~~e~~ayiGD----D~~Dlpvm~~vG-ls~a~~dAh~~v~~~a~~Vt~~  141 (170)
T COG1778          82 SDKLAAFEELLKKLNLDPEEVAYVGD----DLVDLPVMEKVG-LSVAVADAHPLLKQRADYVTSK  141 (170)
T ss_pred             HhHHHHHHHHHHHhCCCHHHhhhhcC----ccccHHHHHHcC-CcccccccCHHHHHhhHhhhhc
Confidence            355555555554     779999999    999999999999 9999999999999999999953

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=98.70  E-value=6.9e-09  Score=87.65  Aligned_cols=46  Identities=15%  Similarity=0.139  Sum_probs=37.5

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++..-.+...++.+++     ++++++|||    +.||+.+.+.+|+.+++|.++
T Consensus       153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD----~~~Di~aA~~aGi~~i~v~~G  203 (272)
T PRK13223        153 LPQKKPDPAALLFVMKMAGVPPSQSLFVGD----SRSDVLAAKAAGVQCVALSYG  203 (272)
T ss_pred             CCCCCCCcHHHHHHHHHhCCChhHEEEECC----CHHHHHHHHHCCCeEEEEecC
Confidence            4556667777777775     789999999    999999999999768887664

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=98.70  E-value=3.6e-08  Score=80.67  Aligned_cols=59  Identities=14%  Similarity=-0.024  Sum_probs=42.5

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh---hHHHHhhhhcc
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED---TMEKCKALFLA  246 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~---~~k~~A~~v~~  246 (248)
                      .+.+-.+...++.+++     ++++++|||    +.||+++.+.+|+.++++.....   .....|+.+..
T Consensus       144 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~igD----s~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~  210 (222)
T PRK10826        144 LPYSKPHPEVYLNCAAKLGVDPLTCVALED----SFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE  210 (222)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHHHeEEEcC----ChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc
Confidence            3444556667777775     789999999    99999999999987777776432   23344555543

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=98.68  E-value=1.6e-08  Score=82.74  Aligned_cols=41  Identities=22%  Similarity=0.122  Sum_probs=33.8

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      -.+..+++.+++     ++++++|||    +.||+++.+.+|+.+++|..
T Consensus       149 kp~~~~~~~~~~~~~~~~~~~i~igD----~~~Di~~a~~~g~~~i~v~~  194 (226)
T PRK13222        149 KPDPAPLLLACEKLGLDPEEMLFVGD----SRNDIQAARAAGCPSVGVTY  194 (226)
T ss_pred             CcChHHHHHHHHHcCCChhheEEECC----CHHHHHHHHHCCCcEEEECc
Confidence            345666777765     789999999    99999999999977888864

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.67  E-value=2.2e-08  Score=80.88  Aligned_cols=54  Identities=15%  Similarity=0.149  Sum_probs=45.7

Q ss_pred             CCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          186 QGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       186 ~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      ..-.|...++.+.+ ..+++++||    +.||++|++.+| .++++ +|.|.+++.|+.+.
T Consensus       129 ~~~~K~~~l~~l~~~~~~~v~vGD----s~nDl~ml~~Ag-~~ia~-~ak~~~~~~~~~~~  183 (203)
T TIGR02137       129 QKDPKRQSVIAFKSLYYRVIAAGD----SYNDTTMLSEAH-AGILF-HAPENVIREFPQFP  183 (203)
T ss_pred             CcchHHHHHHHHHhhCCCEEEEeC----CHHHHHHHHhCC-CCEEe-cCCHHHHHhCCCCC
Confidence            45689999998866 448999999    999999999999 88887 67888888887654

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=98.67  E-value=1.6e-08  Score=83.27  Aligned_cols=40  Identities=10%  Similarity=0.006  Sum_probs=31.6

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      .+...+.++++     ++++++|||    +.||+.+.+.+|+.++++.-
T Consensus       152 P~p~~~~~~~~~l~~~p~~~l~IGD----s~~Di~aA~~aG~~~i~v~~  196 (229)
T PRK13226        152 PHPLPLLVAAERIGVAPTDCVYVGD----DERDILAARAAGMPSVAALW  196 (229)
T ss_pred             CCHHHHHHHHHHhCCChhhEEEeCC----CHHHHHHHHHCCCcEEEEee
Confidence            34455555554     889999999    99999999999977777743

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.66  E-value=9.6e-08  Score=80.12  Aligned_cols=73  Identities=18%  Similarity=0.271  Sum_probs=54.7

Q ss_pred             ccceEEEEecCCCCCCCCCCC---CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe
Q 038498            5 KQGLLALFDVDGTLTAPRKAA---TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK   78 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i---~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~   78 (248)
                      ...|+|+|||||||+++.+.+   ++.+.++|.+|+++ +.++++|+.+...+...+... +...++ +|.++|.....
T Consensus       126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFD-vII~~g~i~~k  203 (303)
T PHA03398        126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFD-IIICGGRKAGE  203 (303)
T ss_pred             eeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcccc-EEEECCCcccc
Confidence            457999999999999998887   89999999999999 999999977665544444431 223343 45666666554

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=98.64  E-value=2e-08  Score=82.19  Aligned_cols=92  Identities=15%  Similarity=0.119  Sum_probs=53.5

Q ss_pred             ccccccchHHHHHHHHHHcCCc-eEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHh
Q 038498          148 YDKIHNIRPKMVSVLREKFAHL-NLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFE  221 (248)
Q Consensus       148 ~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~  221 (248)
                      +..++++.+.....+.+.++-- -+....+    .+-.+..-.....+..+++     +++++++||    +.+|+.|.+
T Consensus       108 l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGD----s~~Di~aA~  179 (220)
T COG0546         108 LGIVTNKPERELDILLKALGLADYFDVIVG----GDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGD----SLNDILAAK  179 (220)
T ss_pred             EEEEeCCcHHHHHHHHHHhCCccccceEEc----CCCCCCCCcCHHHHHHHHHHhCCChhheEEECC----CHHHHHHHH
Confidence            3445666667777777765410 0111111    1222333334455555554     458999999    999999999


Q ss_pred             hCCCceEEccCc---hhhHHHH-hhhhccC
Q 038498          222 SERTVGHTVTSP---EDTMEKC-KALFLAK  247 (248)
Q Consensus       222 ~~g~~~~av~Na---~~~~k~~-A~~v~~~  247 (248)
                      ++|+.+++|..+   .+.+... ++++..+
T Consensus       180 ~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~  209 (220)
T COG0546         180 AAGVPAVGVTWGYNSREELAQAGADVVIDS  209 (220)
T ss_pred             HcCCCEEEEECCCCCCcchhhcCCCEEECC
Confidence            999666666653   2344443 6666544

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=98.60  E-value=2.9e-08  Score=80.41  Aligned_cols=55  Identities=9%  Similarity=0.046  Sum_probs=38.7

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC---chhhHH-HHhhhhcc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS---PEDTME-KCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N---a~~~~k-~~A~~v~~  246 (248)
                      -.+...+..+++     ++++++|||    +.+|+.+.+.+|+.+++|..   ..+.++ ..|+++..
T Consensus       141 Kp~p~~~~~~~~~~~~~~~~~~~igD----s~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~  204 (213)
T TIGR01449       141 KPHPDPLLLAAERLGVAPQQMVYVGD----SRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD  204 (213)
T ss_pred             CCChHHHHHHHHHcCCChhHeEEeCC----CHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC
Confidence            344566666664     788999999    99999999999988887843   222333 34555544

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=98.58  E-value=6.6e-08  Score=81.64  Aligned_cols=54  Identities=20%  Similarity=0.247  Sum_probs=39.9

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc---hhhHH-HHhhhhcc
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP---EDTME-KCKALFLA  246 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na---~~~~k-~~A~~v~~  246 (248)
                      .|..++..+++     ++++++|||    +.+|+.+.+.+|+.++++...   .+++. ..|+++..
T Consensus       196 ~k~~~~~~~l~~~~~~p~~~l~IGD----s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~  258 (273)
T PRK13225        196 SKRRALSQLVAREGWQPAAVMYVGD----ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE  258 (273)
T ss_pred             CCHHHHHHHHHHhCcChhHEEEECC----CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC
Confidence            46677777765     789999999    999999999999888877663   22333 23565554

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=98.56  E-value=3.4e-08  Score=82.42  Aligned_cols=30  Identities=13%  Similarity=-0.107  Sum_probs=27.2

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|+...+.+|+.+++|..+
T Consensus       174 ~~~~l~IGD----s~~Di~aA~~aGi~~i~v~~g  203 (253)
T TIGR01422       174 VAACVKVGD----TVPDIEEGRNAGMWTVGLILS  203 (253)
T ss_pred             chheEEECC----cHHHHHHHHHCCCeEEEEecC
Confidence            678999999    999999999999888888764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK11590 hypothetical protein; Provisional

Probab=98.54  E-value=1.2e-06  Score=71.15  Aligned_cols=49  Identities=14%  Similarity=0.144  Sum_probs=38.2

Q ss_pred             eCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498          185 PQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK  239 (248)
Q Consensus       185 ~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~  239 (248)
                      -.|-.|...++..+.  ...+.|.||    |.||++||+.++ +.++| |+++.+++
T Consensus       159 c~g~~K~~~l~~~~~~~~~~~~aY~D----s~~D~pmL~~a~-~~~~v-np~~~l~~  209 (211)
T PRK11590        159 CLGHEKVAQLERKIGTPLRLYSGYSD----SKQDNPLLYFCQ-HRWRV-TPRGELQQ  209 (211)
T ss_pred             CCChHHHHHHHHHhCCCcceEEEecC----CcccHHHHHhCC-CCEEE-CccHHhhc
Confidence            346678888887663  667889999    999999999999 99988 45555544

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.53  E-value=3.7e-07  Score=73.59  Aligned_cols=45  Identities=20%  Similarity=0.186  Sum_probs=36.1

Q ss_pred             eCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          185 PQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      +..-.|...++.+.. .+++++|||    +.||++|.+.+| .+++++...
T Consensus       128 ~~p~~k~~~l~~~~~~~~~~v~iGD----s~~D~~~~~aa~-~~v~~~~~~  173 (205)
T PRK13582        128 RQPDGKRQAVKALKSLGYRVIAAGD----SYNDTTMLGEAD-AGILFRPPA  173 (205)
T ss_pred             cccchHHHHHHHHHHhCCeEEEEeC----CHHHHHHHHhCC-CCEEECCCH
Confidence            334567788887765 789999999    999999999999 888875543

>PRK11587 putative phosphatase; Provisional

Probab=98.53  E-value=1.1e-07  Score=77.50  Aligned_cols=31  Identities=13%  Similarity=-0.095  Sum_probs=28.5

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      ++++++|||    +.+|+...+.+|+.+++|.+..
T Consensus       155 p~~~l~igD----s~~di~aA~~aG~~~i~v~~~~  185 (218)
T PRK11587        155 PQECVVVED----APAGVLSGLAAGCHVIAVNAPA  185 (218)
T ss_pred             cccEEEEec----chhhhHHHHHCCCEEEEECCCC
Confidence            899999999    9999999999998889998754

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=98.49  E-value=1.3e-07  Score=78.83  Aligned_cols=29  Identities=10%  Similarity=-0.044  Sum_probs=26.4

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      ++++++|||    +.+|+...+.+|+..+++..
T Consensus       181 ~~~~l~vgD----s~~Di~aA~~aGi~~i~v~~  209 (248)
T PLN02770        181 KDHTFVFED----SVSGIKAGVAAGMPVVGLTT  209 (248)
T ss_pred             hhHEEEEcC----CHHHHHHHHHCCCEEEEEeC
Confidence            889999999    99999999999988888864

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.48  E-value=7.2e-08  Score=93.40  Aligned_cols=79  Identities=19%  Similarity=0.294  Sum_probs=61.6

Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +...+.....+.++++   +..     .+.++.|.  +|..+++.+.+ .++++++||    +.||++|++.+| .+++|
T Consensus       673 Tgd~~~~a~~ia~~lg---i~~-----~~~~~~p~--~K~~~i~~l~~~~~~v~~vGD----g~nD~~al~~Ag-vgia~  737 (834)
T PRK10671        673 TGDNPTTANAIAKEAG---IDE-----VIAGVLPD--GKAEAIKRLQSQGRQVAMVGD----GINDAPALAQAD-VGIAM  737 (834)
T ss_pred             cCCCHHHHHHHHHHcC---CCE-----EEeCCCHH--HHHHHHHHHhhcCCEEEEEeC----CHHHHHHHHhCC-eeEEe
Confidence            4455555566666654   211     12234454  69999999987 678999999    999999999999 99999


Q ss_pred             cCchhhHHHHhhhhc
Q 038498          231 TSPEDTMEKCKALFL  245 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~  245 (248)
                      +|+++..++.|+.++
T Consensus       738 g~g~~~a~~~ad~vl  752 (834)
T PRK10671        738 GGGSDVAIETAAITL  752 (834)
T ss_pred             cCCCHHHHHhCCEEE
Confidence            999999999999887

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=98.47  E-value=1.3e-07  Score=79.36  Aligned_cols=39  Identities=13%  Similarity=0.119  Sum_probs=31.0

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      +.......++     ++++++|||    +.+|+...+.+|+..+++.+
T Consensus       167 ~Pe~~~~a~~~l~~~p~~~l~IgD----s~~Di~aA~~aG~~~i~v~g  210 (260)
T PLN03243        167 DPEMFMYAAERLGFIPERCIVFGN----SNSSVEAAHDGCMKCVAVAG  210 (260)
T ss_pred             CHHHHHHHHHHhCCChHHeEEEcC----CHHHHHHHHHcCCEEEEEec
Confidence            3444555553     889999999    99999999999977778764

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=98.47  E-value=2.3e-07  Score=75.64  Aligned_cols=41  Identities=15%  Similarity=0.001  Sum_probs=31.4

Q ss_pred             CHHHHHHHhhc------cCCEEEEcCCCCCCCCCHHHHhhCCCce-EEccCc
Q 038498          189 DKTYCLRYLDD------FNEIHFFGDKTYKGGNDHEIFESERTVG-HTVTSP  233 (248)
Q Consensus       189 ~K~~al~~l~~------~~~~~aiGD~~~~~~NDi~M~~~~g~~~-~av~Na  233 (248)
                      .+...+..+++      ++++++|||    +.+|+.+.+.+|+.+ +++...
T Consensus       146 P~p~~~~~a~~~~~~~~~~~~~~igD----~~~Di~aa~~aG~~~~i~~~~g  193 (220)
T TIGR03351       146 PAPDLILRAMELTGVQDVQSVAVAGD----TPNDLEAGINAGAGAVVGVLTG  193 (220)
T ss_pred             CCHHHHHHHHHHcCCCChhHeEEeCC----CHHHHHHHHHCCCCeEEEEecC
Confidence            45566666654      478999999    999999999999665 566543

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=98.46  E-value=1e-07  Score=80.22  Aligned_cols=30  Identities=10%  Similarity=-0.248  Sum_probs=26.9

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|+.+.+.+|+.+++|..+
T Consensus       176 ~~e~l~IGD----s~~Di~aA~~aG~~~i~v~~g  205 (267)
T PRK13478        176 VAACVKVDD----TVPGIEEGLNAGMWTVGVILS  205 (267)
T ss_pred             CcceEEEcC----cHHHHHHHHHCCCEEEEEccC
Confidence            478999999    999999999999888888764

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.35  E-value=3.3e-06  Score=67.58  Aligned_cols=49  Identities=20%  Similarity=0.249  Sum_probs=38.5

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhh
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKA  242 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~  242 (248)
                      .+|+.+++.+++     ++++++|||    +.||++|++.+| ..+++.. .+.++.+|.
T Consensus       146 ~~k~~~~~~~~~~~~~~~~~~i~iGD----s~~D~~~a~~ag-~~~a~~~-~~~~~~~a~  199 (201)
T TIGR01491       146 DNKGEAVERLKRELNPSLTETVAVGD----SKNDLPMFEVAD-ISISLGD-EGHADYLAK  199 (201)
T ss_pred             ccHHHHHHHHHHHhCCCHHHEEEEcC----CHhHHHHHHhcC-CeEEECC-Cccchhhcc
Confidence            468888888875     678999999    999999999999 8887754 344455554

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PLN02954 phosphoserine phosphatase

Probab=98.33  E-value=1.7e-06  Score=70.74  Aligned_cols=57  Identities=12%  Similarity=0.222  Sum_probs=39.9

Q ss_pred             CCCCHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEE--ccCc--hhhHHHHhhhhccC
Q 038498          186 QGWDKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHT--VTSP--EDTMEKCKALFLAK  247 (248)
Q Consensus       186 ~~~~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a--v~Na--~~~~k~~A~~v~~~  247 (248)
                      .+.+|..+++.+++   .+++++|||    +.||+.|.+.+| ..+.  .+..  .+.....|+++..+
T Consensus       152 ~~~~K~~~i~~~~~~~~~~~~i~iGD----s~~Di~aa~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~  215 (224)
T PLN02954        152 RSGGKAEAVQHIKKKHGYKTMVMIGD----GATDLEARKPGG-ADLFIGYGGVQVREAVAAKADWFVTD  215 (224)
T ss_pred             CCccHHHHHHHHHHHcCCCceEEEeC----CHHHHHhhhcCC-CCEEEecCCCccCHHHHhcCCEEECC
Confidence            45679999998886   578999999    999999988866 4433  3432  23345556666543

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=98.33  E-value=3.6e-07  Score=80.09  Aligned_cols=42  Identities=17%  Similarity=0.154  Sum_probs=33.3

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      .+.......++     ++++++|||    +.+|+...+.+|+..++|.+..
T Consensus       273 P~Peifl~A~~~lgl~Peecl~IGD----S~~DIeAAk~AGm~~IgV~~~~  319 (381)
T PLN02575        273 PDPEMFIYAAQLLNFIPERCIVFGN----SNQTVEAAHDARMKCVAVASKH  319 (381)
T ss_pred             CCHHHHHHHHHHcCCCcccEEEEcC----CHHHHHHHHHcCCEEEEECCCC
Confidence            34444444443     889999999    9999999999999999998754

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=98.30  E-value=7.2e-07  Score=75.92  Aligned_cols=41  Identities=5%  Similarity=-0.125  Sum_probs=32.5

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      .+...+..+++     ++++++|||    +.+|+.+.+.+|+..++|.+.
T Consensus       203 P~p~~~~~a~~~~~~~p~~~l~IGD----s~~Di~aA~~aG~~~i~v~~g  248 (286)
T PLN02779        203 PDPDIYNLAAETLGVDPSRCVVVED----SVIGLQAAKAAGMRCIVTKSS  248 (286)
T ss_pred             CCHHHHHHHHHHhCcChHHEEEEeC----CHHhHHHHHHcCCEEEEEccC
Confidence            33445555554     789999999    999999999999888888664

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.26  E-value=6.6e-07  Score=70.25  Aligned_cols=36  Identities=28%  Similarity=0.314  Sum_probs=31.2

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      .+.+.+|...++.+++     ++++++|||    +.||++|++.+
T Consensus       137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGD----s~~D~~~~~~a  177 (177)
T TIGR01488       137 NPEGECKGKVLKELLEESKITLKKIIAVGD----SVNDLPMLKLA  177 (177)
T ss_pred             cCCcchHHHHHHHHHHHhCCCHHHEEEEeC----CHHHHHHHhcC
Confidence            4678899999999875     668999999    99999999854

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=98.24  E-value=1.5e-06  Score=70.75  Aligned_cols=41  Identities=10%  Similarity=-0.104  Sum_probs=32.4

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~  234 (248)
                      +....+.+++     ++++++|||    +. +|+...+.+|+.++++....
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~igD----s~~~di~~A~~aG~~~i~~~~~~  198 (221)
T TIGR02253       152 HPKIFYAALKRLGVKPEEAVMVGD----RLDKDIKGAKNLGMKTVWINQGK  198 (221)
T ss_pred             CHHHHHHHHHHcCCChhhEEEECC----ChHHHHHHHHHCCCEEEEECCCC
Confidence            3445555554     789999999    98 99999999998888887644

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.22  E-value=5.7e-07  Score=71.43  Aligned_cols=41  Identities=7%  Similarity=-0.104  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      .-.+...+.+.++     ++++++|||    +.+|+...+.+|+.+++|.
T Consensus       141 ~KP~p~~~~~~~~~~~~~~~~~l~igD----s~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        141 HKPAPDTFLRCAQLMGVQPTQCVVFED----ADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             CCCChHHHHHHHHHcCCCHHHeEEEec----cHhhHHHHHHCCCEEEeec
Confidence            3445555666654     788999999    9999999999997777764

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=98.21  E-value=8.6e-07  Score=80.40  Aligned_cols=40  Identities=13%  Similarity=0.132  Sum_probs=32.5

Q ss_pred             CHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          189 DKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       189 ~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      .|...+...++   ++++++|||    +.+|+.+.+.+|+..+++..
T Consensus       386 ~kP~~~~~al~~l~~~~~v~VGD----s~~Di~aAk~AG~~~I~v~~  428 (459)
T PRK06698        386 NKSDLVKSILNKYDIKEAAVVGD----RLSDINAAKDNGLIAIGCNF  428 (459)
T ss_pred             CCcHHHHHHHHhcCcceEEEEeC----CHHHHHHHHHCCCeEEEEeC
Confidence            35555666554   889999999    99999999999977888755

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.21  E-value=1.3e-06  Score=73.09  Aligned_cols=53  Identities=26%  Similarity=0.327  Sum_probs=43.9

Q ss_pred             ceEEEEecCCCCCCCCCC---CCHHHHHHHHHHhhc-CeEEEEcCCChH---HHHHHhcc
Q 038498            7 GLLALFDVDGTLTAPRKA---ATPQMLEFMRELRKV-VTVGVVGGSDLS---KISEQLGK   59 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~---i~~~~~~al~~l~~~-~~v~iaTGR~~~---~~~~~l~~   59 (248)
                      +|+|+||+||||++.+.+   +.+.+.++|++|+++ ++++++|||+..   .+.+.+..
T Consensus         1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~   60 (257)
T TIGR01458         1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR   60 (257)
T ss_pred             CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence            479999999999988662   788999999999999 999999998765   35555543

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.17  E-value=2.6e-05  Score=63.61  Aligned_cols=37  Identities=22%  Similarity=0.090  Sum_probs=32.2

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      ..|..+++.+.. ++++++|||    +.||+.+.+.+| ..++
T Consensus       147 ~~K~~~l~~~~~~~~~~i~iGD----s~~Di~aa~~Ag-~~~a  184 (219)
T PRK09552        147 CCKPSLIRKLSDTNDFHIVIGD----SITDLEAAKQAD-KVFA  184 (219)
T ss_pred             CchHHHHHHhccCCCCEEEEeC----CHHHHHHHHHCC-ccee
Confidence            458999998875 789999999    999999999999 7555

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=98.17  E-value=1.1e-06  Score=69.54  Aligned_cols=37  Identities=14%  Similarity=0.047  Sum_probs=28.5

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +...++.+++     ++++++|||    +.+|+.+.+.+|..+++|
T Consensus       144 ~~~~~~~~~~~~~~~~~~~v~IgD----~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       144 HPETFLLAAELLGVSPNECVVFED----ALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             ChHHHHHHHHHcCCCHHHeEEEeC----cHhhHHHHHHCCCeEeeC
Confidence            3344455553     789999999    999999999999666654

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK10444 UMP phosphatase; Provisional

Probab=98.16  E-value=2.1e-06  Score=71.54  Aligned_cols=52  Identities=15%  Similarity=0.277  Sum_probs=44.4

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChH---HHHHHhcc
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLS---KISEQLGK   59 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~---~~~~~l~~   59 (248)
                      +|+++||+||||++.+ .+.+.+.++|++|+++ ..++++|+|+..   .+.+++..
T Consensus         1 ~~~v~~DlDGtL~~~~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~   56 (248)
T PRK10444          1 IKNVICDIDGVLMHDN-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT   56 (248)
T ss_pred             CcEEEEeCCCceEeCC-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            5899999999999886 6788899999999999 999999999974   45555543

>PLN02645 phosphoglycolate phosphatase

Probab=98.15  E-value=3.4e-06  Score=72.64  Aligned_cols=53  Identities=17%  Similarity=0.199  Sum_probs=43.7

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLG   58 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~   58 (248)
                      .++++++||+||||+..+. +.+.+.++|++|+++ .+++++|+|+.   ..+.+.+.
T Consensus        26 ~~~~~~~~D~DGtl~~~~~-~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~   82 (311)
T PLN02645         26 DSVETFIFDCDGVIWKGDK-LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE   82 (311)
T ss_pred             HhCCEEEEeCcCCeEeCCc-cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence            3589999999999998765 457789999999999 99999999994   45554443

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.11  E-value=6.8e-06  Score=61.40  Aligned_cols=44  Identities=18%  Similarity=0.283  Sum_probs=36.9

Q ss_pred             eEEEEecCCCCCCCCC---C---------CCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            8 LLALFDVDGTLTAPRK---A---------ATPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         8 kli~~DlDGTLl~~~~---~---------i~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      |++++||||||++...   .         +-+.+.+.|+.|+++ ++++++|+++..
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~   57 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDP   57 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCH
Confidence            6899999999998832   1         356889999999999 999999999433

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=98.08  E-value=3.4e-06  Score=68.05  Aligned_cols=56  Identities=13%  Similarity=0.010  Sum_probs=38.1

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc----hhhHHHHhhhhccC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP----EDTMEKCKALFLAK  247 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na----~~~~k~~A~~v~~~  247 (248)
                      -.+...+..+++     ++++++|||    +.+|+.+.+.+|+.++++...    .+-.+.-|+++..+
T Consensus       131 KP~~~~~~~~~~~~~~~~~~~l~igD----~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~  195 (205)
T TIGR01454       131 KPAPDIVREALRLLDVPPEDAVMVGD----AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK  195 (205)
T ss_pred             CCChHHHHHHHHHcCCChhheEEEcC----CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC
Confidence            334555566554     789999999    999999999999666666432    22234446666544

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.02  E-value=5.8e-06  Score=67.84  Aligned_cols=43  Identities=12%  Similarity=0.050  Sum_probs=32.7

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCc-eEEccCchhh
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTV-GHTVTSPEDT  236 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~-~~av~Na~~~  236 (248)
                      +......+++     ++++++|||    +.+|+...+.+|+. .++|.++...
T Consensus       151 ~p~~~~~~~~~~~~~p~~~l~igD----s~~di~aA~~aG~~~~~~v~~~~~~  199 (224)
T PRK14988        151 DQRLWQAVAEHTGLKAERTLFIDD----SEPILDAAAQFGIRYCLGVTNPDSG  199 (224)
T ss_pred             CHHHHHHHHHHcCCChHHEEEEcC----CHHHHHHHHHcCCeEEEEEeCCCCC
Confidence            3555666554     889999999    99999999999953 4667776543

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.00  E-value=1.1e-05  Score=68.52  Aligned_cols=52  Identities=15%  Similarity=0.211  Sum_probs=41.6

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhc
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLG   58 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~   58 (248)
                      .+++|+||+||||++.+..++ .+.++|++|+++ +.++++|+|+.   ..+...+.
T Consensus         1 ~~~~~~~D~DGtl~~~~~~~~-ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~   56 (279)
T TIGR01452         1 RAQGFIFDCDGVLWLGERVVP-GAPELLDRLARAGKAALFVTNNSTKSRAEYALKFA   56 (279)
T ss_pred             CccEEEEeCCCceEcCCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence            368999999999998766554 489999999999 99999999874   34444443

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PLN02940 riboflavin kinase

Probab=98.00  E-value=4.1e-06  Score=74.13  Aligned_cols=43  Identities=7%  Similarity=-0.230  Sum_probs=33.9

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      -.+.......++     ++++++|||    +.+|+...+.+|+..++|....
T Consensus       150 KP~p~~~~~a~~~lgv~p~~~l~VGD----s~~Di~aA~~aGi~~I~v~~g~  197 (382)
T PLN02940        150 KPSPDIFLEAAKRLNVEPSNCLVIED----SLPGVMAGKAAGMEVIAVPSIP  197 (382)
T ss_pred             CCCHHHHHHHHHHcCCChhHEEEEeC----CHHHHHHHHHcCCEEEEECCCC
Confidence            334455555554     889999999    9999999999998888887643

>PRK08238 hypothetical protein; Validated

Probab=97.96  E-value=2.6e-05  Score=70.87  Aligned_cols=78  Identities=10%  Similarity=0.146  Sum_probs=49.7

Q ss_pred             hHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          155 RPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      .+...+.+.++++-......  +....  ..++..|...++.....+++.++||    +.||++|++.+| .+++|+...
T Consensus        98 ~~~~a~~i~~~lGlFd~Vig--sd~~~--~~kg~~K~~~l~~~l~~~~~~yvGD----S~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238         98 DERLAQAVAAHLGLFDGVFA--SDGTT--NLKGAAKAAALVEAFGERGFDYAGN----SAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             CHHHHHHHHHHcCCCCEEEe--CCCcc--ccCCchHHHHHHHHhCccCeeEecC----CHHHHHHHHhCC-CeEEECCCH
Confidence            33445556666542223333  12111  2334568777776555556889999    999999999999 999886654


Q ss_pred             hhHHHHhh
Q 038498          235 DTMEKCKA  242 (248)
Q Consensus       235 ~~~k~~A~  242 (248)
                      . +++.|+
T Consensus       169 ~-l~~~a~  175 (479)
T PRK08238        169 G-VARAAR  175 (479)
T ss_pred             H-HHHHHH
Confidence            4 666665

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=97.95  E-value=0.0002  Score=58.18  Aligned_cols=40  Identities=20%  Similarity=0.166  Sum_probs=33.6

Q ss_pred             CCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          187 GWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       187 ~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      |..|..+++.+.. .+++++|||    +.||+.|++.+| ..++-.
T Consensus       142 g~~K~~~l~~~~~~~~~~i~iGD----g~~D~~~a~~Ad-~~~ar~  182 (214)
T TIGR03333       142 GCCKPSLIRKLSEPNDYHIVIGD----SVTDVEAAKQSD-LCFARD  182 (214)
T ss_pred             CCCHHHHHHHHhhcCCcEEEEeC----CHHHHHHHHhCC-eeEehH
Confidence            3468999998775 778999999    999999999998 766644

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.94  E-value=2.4e-05  Score=61.18  Aligned_cols=46  Identities=26%  Similarity=0.377  Sum_probs=37.4

Q ss_pred             ccceEEEEecCCCCCCCCCCC------------CHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498            5 KQGLLALFDVDGTLTAPRKAA------------TPQMLEFMRELRKV-VTVGVVGGSDL   50 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i------------~~~~~~al~~l~~~-~~v~iaTGR~~   50 (248)
                      ++.|+++||+||||+.+.+..            -+.+.++|++|+++ +.++++|..+.
T Consensus        11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~   69 (166)
T TIGR01664        11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG   69 (166)
T ss_pred             CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            456899999999999865422            26689999999999 99999996553

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=97.94  E-value=4.7e-05  Score=61.83  Aligned_cols=48  Identities=15%  Similarity=0.100  Sum_probs=37.0

Q ss_pred             eCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHH
Q 038498          185 PQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTME  238 (248)
Q Consensus       185 ~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k  238 (248)
                      -.|-.|-..++..+.  ...+.|.||    |.||++||+.++ +.++| |+++.++
T Consensus       158 c~g~~Kv~rl~~~~~~~~~~~~aYsD----S~~D~pmL~~a~-~~~~V-np~~~L~  207 (210)
T TIGR01545       158 CLGHEKVAQLEQKIGSPLKLYSGYSD----SKQDNPLLAFCE-HRWRV-SKRGELQ  207 (210)
T ss_pred             CCChHHHHHHHHHhCCChhheEEecC----CcccHHHHHhCC-CcEEE-CcchHhc
Confidence            345678888887763  567889999    999999999999 99988 4444443

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=97.93  E-value=1.6e-05  Score=59.40  Aligned_cols=42  Identities=26%  Similarity=0.385  Sum_probs=36.4

Q ss_pred             eEEEEecCCCCCCCC--------CCCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            8 LLALFDVDGTLTAPR--------KAATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         8 kli~~DlDGTLl~~~--------~~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      |+++||+||||++..        ..+.+.+.++|+.|+++ ++++++|+++
T Consensus         1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~   51 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQS   51 (132)
T ss_pred             CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence            689999999999631        24577889999999999 9999999998

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=97.81  E-value=2e-05  Score=64.15  Aligned_cols=37  Identities=16%  Similarity=0.135  Sum_probs=29.0

Q ss_pred             HHHHHh-h-ccCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccC
Q 038498          192 YCLRYL-D-DFNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTS  232 (248)
Q Consensus       192 ~al~~l-~-~~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~N  232 (248)
                      .+++.+ . +++++++|||    +. +|+...+.+|+.++.+..
T Consensus       160 ~~~~~~~~~~~~~~v~igD----~~~~di~~A~~~G~~~i~~~~  199 (224)
T TIGR02254       160 YALERMPKFSKEEVLMIGD----SLTADIKGGQNAGLDTCWMNP  199 (224)
T ss_pred             HHHHHhcCCCchheEEECC----CcHHHHHHHHHCCCcEEEECC
Confidence            445555 2 3889999999    98 899999999976777654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=97.74  E-value=1.6e-05  Score=62.80  Aligned_cols=40  Identities=10%  Similarity=-0.081  Sum_probs=31.9

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      -.+....+..++     ++++++|||    +.+|+...+.+|+.+++|+
T Consensus       141 kp~p~~~~~~~~~~~~~~~~~v~vgD----~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       141 KPDPEIFLAAAEGLGVSPSECIGIED----AQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             CCChHHHHHHHHHcCCCHHHeEEEec----CHHHHHHHHHcCCEEEecC
Confidence            445556566654     788999999    9999999999998777764

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=97.72  E-value=9.5e-05  Score=61.03  Aligned_cols=44  Identities=16%  Similarity=0.220  Sum_probs=35.1

Q ss_pred             cceEEEEecCCCCCCCCC------C-CCHH---------------------------HHHHHHHHhhc-CeEEEEcCCC
Q 038498            6 QGLLALFDVDGTLTAPRK------A-ATPQ---------------------------MLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~------~-i~~~---------------------------~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      +..+|+|||||||+++..      . .+++                           ..+.|+.++++ ++++++|+|.
T Consensus        62 ~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~  140 (237)
T TIGR01672        62 PPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRT  140 (237)
T ss_pred             CCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCC
Confidence            345999999999998865      1 2331                           67888999999 9999999993

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=97.70  E-value=0.0001  Score=59.18  Aligned_cols=32  Identities=16%  Similarity=-0.018  Sum_probs=25.0

Q ss_pred             HHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCce
Q 038498          192 YCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVG  227 (248)
Q Consensus       192 ~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~  227 (248)
                      ...+++++     ++++++|||    +. +|+...+.+|+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~IgD----~~~~Di~~A~~aG~~~  201 (203)
T TIGR02252       164 KIFQEALERAGISPEEALHIGD----SLRNDYQGARAAGWRA  201 (203)
T ss_pred             HHHHHHHHHcCCChhHEEEECC----CchHHHHHHHHcCCee
Confidence            34555553     889999999    97 8999999999443

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=97.65  E-value=8.3e-05  Score=61.48  Aligned_cols=63  Identities=24%  Similarity=0.253  Sum_probs=47.3

Q ss_pred             EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhccc--ccCCCceEEecCC
Q 038498           10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGKT--VIDEYDYVFSENG   73 (248)
Q Consensus        10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~~--~~~~~~~~i~~nG   73 (248)
                      ++||+||||++....++ .+.++|+.++++ ..+.+.|   ||+..++.+.+...  +...++-++.+..
T Consensus         1 ~lfD~DGvL~~~~~~~~-~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~   69 (236)
T TIGR01460         1 FLFDIDGVLWLGHKPIP-GAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS   69 (236)
T ss_pred             CEEeCcCccCcCCccCc-CHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH
Confidence            58999999999876655 889999999999 9999998   89988777666541  2233445555444

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PHA02597 30

Probab=97.65  E-value=6.6e-05  Score=60.07  Aligned_cols=43  Identities=9%  Similarity=-0.003  Sum_probs=34.1

Q ss_pred             CHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhC--CCceEEccCchh
Q 038498          189 DKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESE--RTVGHTVTSPED  235 (248)
Q Consensus       189 ~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~--g~~~~av~Na~~  235 (248)
                      .|...+..+++   ++++++|||    +.+|+...+.+  |+..++|..+..
T Consensus       131 ~kp~~~~~a~~~~~~~~~v~vgD----s~~di~aA~~a~~Gi~~i~~~~~~~  178 (197)
T PHA02597        131 SKEKLFIKAKEKYGDRVVCFVDD----LAHNLDAAHEALSQLPVIHMLRGER  178 (197)
T ss_pred             ccHHHHHHHHHHhCCCcEEEeCC----CHHHHHHHHHHHcCCcEEEecchhh
Confidence            35666666655   568999999    99999999998  988888876654

2 hypothetical protein; Provisional

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=97.57  E-value=9e-05  Score=56.61  Aligned_cols=42  Identities=24%  Similarity=0.275  Sum_probs=35.0

Q ss_pred             eEEEEecCCCCCCCCC----------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            8 LLALFDVDGTLTAPRK----------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         8 kli~~DlDGTLl~~~~----------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      ++++||+||||++...          .+-+.+.++|+.|+++ ++++++|..+
T Consensus         1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~   53 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS   53 (147)
T ss_pred             CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence            5789999999998864          2366778999999999 9999999864

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.54  E-value=9.1e-05  Score=72.69  Aligned_cols=54  Identities=20%  Similarity=0.305  Sum_probs=47.8

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      -+|...++.+.+ .+.+.++||    +.||.+|++.|+ .|++|+++++.+|+.|++|+.
T Consensus       617 ~~K~~iV~~lq~~g~~va~iGD----G~ND~~alk~Ad-VGia~g~g~~~ak~aAD~vl~  671 (917)
T TIGR01116       617 SHKSELVELLQEQGEIVAMTGD----GVNDAPALKKAD-IGIAMGSGTEVAKEASDMVLA  671 (917)
T ss_pred             HHHHHHHHHHHhcCCeEEEecC----CcchHHHHHhCC-eeEECCCCcHHHHHhcCeEEc
Confidence            468888888876 556777999    999999999999 999999999999999999884

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.50  E-value=0.0003  Score=55.16  Aligned_cols=46  Identities=22%  Similarity=0.271  Sum_probs=41.5

Q ss_pred             ccceEEEEecCCCCCCCCC-CCCHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498            5 KQGLLALFDVDGTLTAPRK-AATPQMLEFMRELRKV-VTVGVVGGSDL   50 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~-~i~~~~~~al~~l~~~-~~v~iaTGR~~   50 (248)
                      ..++++++|+||||+..+. .+.+.+.++|+.|+++ ++++++|+.+.
T Consensus        23 ~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~   70 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAG   70 (170)
T ss_pred             CCCCEEEEecCCccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCch
Confidence            5789999999999998766 6888999999999999 99999999873

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=97.49  E-value=0.00021  Score=57.19  Aligned_cols=39  Identities=10%  Similarity=-0.087  Sum_probs=31.0

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      +....+.+++     ++++++|||    +.+|+...+.+|+.++.+..
T Consensus       150 ~~~~~~~~~~~~~~~p~~~~~vgD----~~~Di~~A~~~G~~~i~v~r  193 (198)
T TIGR01428       150 APQVYQLALEALGVPPDEVLFVAS----NPWDLGGAKKFGFKTAWVNR  193 (198)
T ss_pred             CHHHHHHHHHHhCCChhhEEEEeC----CHHHHHHHHHCCCcEEEecC
Confidence            3444555543     889999999    99999999999977777754

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=97.47  E-value=0.00019  Score=54.91  Aligned_cols=33  Identities=18%  Similarity=0.009  Sum_probs=26.4

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESER  224 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g  224 (248)
                      .-.+...+.++++     + ++++|||    +.+|+.+.+.+|
T Consensus       117 ~Kp~~~~~~~~~~~~~~~~-~~l~iGD----s~~Di~aa~~aG  154 (154)
T TIGR01549       117 AKPEPEIFLAALESLGLPP-EVLHVGD----NLNDIEGARNAG  154 (154)
T ss_pred             CCcCHHHHHHHHHHcCCCC-CEEEEeC----CHHHHHHHHHcc
Confidence            3445677777775     6 9999999    999999998775

HAD subfamilies caused by an overly broad single model.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.44  E-value=0.00033  Score=58.08  Aligned_cols=46  Identities=15%  Similarity=0.125  Sum_probs=38.9

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      +++++++||+||||.+.. .+.+.+.++|++|+++ ++++++|..+..
T Consensus         6 ~~~~~~~~D~dG~l~~~~-~~~pga~e~L~~L~~~G~~~~ivTN~~~~   52 (242)
T TIGR01459         6 NDYDVFLLDLWGVIIDGN-HTYPGAVQNLNKIIAQGKPVYFVSNSPRN   52 (242)
T ss_pred             hcCCEEEEecccccccCC-ccCccHHHHHHHHHHCCCEEEEEeCCCCC
Confidence            467899999999999774 4578899999999999 999998776543

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.43  E-value=0.00013  Score=72.58  Aligned_cols=40  Identities=10%  Similarity=-0.073  Sum_probs=32.2

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      +.......++     ++++++|||    +.+|+...+.+|+..++|...
T Consensus       220 ~Pe~~~~a~~~lgv~p~e~v~IgD----s~~Di~AA~~aGm~~I~v~~~  264 (1057)
T PLN02919        220 APDIFLAAAKILGVPTSECVVIED----ALAGVQAARAAGMRCIAVTTT  264 (1057)
T ss_pred             CHHHHHHHHHHcCcCcccEEEEcC----CHHHHHHHHHcCCEEEEECCC
Confidence            3444444443     889999999    999999999999888888764

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.41  E-value=0.00016  Score=68.09  Aligned_cols=53  Identities=21%  Similarity=0.226  Sum_probs=49.6

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      -+|...++.+++ .+.++++||    +.||.++|+.++ .|+||+++++..|++|+.|+
T Consensus       495 edK~~~v~~lq~~g~~VamvGD----G~NDapAL~~Ad-vGiAm~~gt~~akeaadivL  548 (675)
T TIGR01497       495 EDKIALIRQEQAEGKLVAMTGD----GTNDAPALAQAD-VGVAMNSGTQAAKEAANMVD  548 (675)
T ss_pred             HHHHHHHHHHHHcCCeEEEECC----CcchHHHHHhCC-EeEEeCCCCHHHHHhCCEEE
Confidence            579999999987 557999999    999999999999 99999999999999999986

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.37  E-value=0.00019  Score=68.90  Aligned_cols=80  Identities=19%  Similarity=0.359  Sum_probs=64.5

Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      .++..+.....+.++++   +.+.      .+..|.  +|...++.+.+.+.++++||    +.||.++++.++ .|++|
T Consensus       590 lTGd~~~~a~~ia~~lg---i~~~------~~~~p~--~K~~~v~~l~~~~~v~mvGD----giNDapAl~~A~-vgia~  653 (741)
T PRK11033        590 LTGDNPRAAAAIAGELG---IDFR------AGLLPE--DKVKAVTELNQHAPLAMVGD----GINDAPAMKAAS-IGIAM  653 (741)
T ss_pred             EcCCCHHHHHHHHHHcC---CCee------cCCCHH--HHHHHHHHHhcCCCEEEEEC----CHHhHHHHHhCC-eeEEe
Confidence            34556667777777765   2222      224454  89999999987778999999    999999999999 99999


Q ss_pred             cCchhhHHHHhhhhcc
Q 038498          231 TSPEDTMEKCKALFLA  246 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~~  246 (248)
                      +++++..++.|+.++-
T Consensus       654 g~~~~~a~~~adivl~  669 (741)
T PRK11033        654 GSGTDVALETADAALT  669 (741)
T ss_pred             cCCCHHHHHhCCEEEe
Confidence            9999999999998873

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=97.34  E-value=0.00026  Score=65.94  Aligned_cols=80  Identities=19%  Similarity=0.295  Sum_probs=61.9

Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      +++..+.....+.++++   +.+.      .++.|  -+|...++.+.+ .++++++||    +.||.++++.+| .+++
T Consensus       427 lSgd~~~~a~~ia~~lg---i~~~------~~~~p--~~K~~~v~~l~~~~~~v~~VGD----g~nD~~al~~A~-vgia  490 (562)
T TIGR01511       427 LTGDNRKTAKAVAKELG---INVR------AEVLP--DDKAALIKELQEKGRVVAMVGD----GINDAPALAQAD-VGIA  490 (562)
T ss_pred             EcCCCHHHHHHHHHHcC---CcEE------ccCCh--HHHHHHHHHHHHcCCEEEEEeC----CCccHHHHhhCC-EEEE
Confidence            34455566666666654   2111      12334  489999999886 778999999    999999999999 9999


Q ss_pred             ccCchhhHHHHhhhhcc
Q 038498          230 VTSPEDTMEKCKALFLA  246 (248)
Q Consensus       230 v~Na~~~~k~~A~~v~~  246 (248)
                      |+++.+..++.|++++.
T Consensus       491 ~g~g~~~a~~~Advvl~  507 (562)
T TIGR01511       491 IGAGTDVAIEAADVVLM  507 (562)
T ss_pred             eCCcCHHHHhhCCEEEe
Confidence            99999999999998874

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=97.32  E-value=0.00092  Score=51.39  Aligned_cols=56  Identities=25%  Similarity=0.351  Sum_probs=47.4

Q ss_pred             cccceEEEEecCCCCCCCCC-CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498            4 RKQGLLALFDVDGTLTAPRK-AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK   59 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~-~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~   59 (248)
                      +..+|.+++|+|.||++.+. ..+++.++=+.+++.+ ++++++|-.+...+....+.
T Consensus        25 ~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~   82 (175)
T COG2179          25 AHGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK   82 (175)
T ss_pred             HcCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence            35789999999999999876 4899999999999999 99999998877665544443

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.28  E-value=0.00023  Score=50.78  Aligned_cols=49  Identities=27%  Similarity=0.388  Sum_probs=37.1

Q ss_pred             EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCC---hHHHHHHhcc
Q 038498           10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSD---LSKISEQLGK   59 (248)
Q Consensus        10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~---~~~~~~~l~~   59 (248)
                      ++||+||||...+. .-+...++|++|+++ .++++.|-.+   ..++.+.|..
T Consensus         1 ~l~D~dGvl~~g~~-~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~   53 (101)
T PF13344_consen    1 FLFDLDGVLYNGNE-PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK   53 (101)
T ss_dssp             EEEESTTTSEETTE-E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred             CEEeCccEeEeCCC-cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            68999999998644 566679999999999 9999988665   3456666654

...

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=97.28  E-value=0.00026  Score=65.80  Aligned_cols=82  Identities=16%  Similarity=0.239  Sum_probs=63.3

Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      +++........+.++++   +...     +-++.|  -+|...++.+.+ .++++++||    +.||+++++.+| .+++
T Consensus       407 vTgd~~~~a~~i~~~lg---i~~~-----f~~~~p--~~K~~~v~~l~~~~~~v~~vGD----g~nD~~al~~A~-vgia  471 (556)
T TIGR01525       407 LTGDNRSAAEAVAAELG---IDEV-----HAELLP--EDKLAIVKELQEEGGVVAMVGD----GINDAPALAAAD-VGIA  471 (556)
T ss_pred             EeCCCHHHHHHHHHHhC---CCee-----eccCCH--HHHHHHHHHHHHcCCEEEEEEC----ChhHHHHHhhCC-EeEE
Confidence            45566666677777765   2111     112334  488999999986 778999999    999999999999 9999


Q ss_pred             ccCchhhHHHHhhhhccC
Q 038498          230 VTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       230 v~Na~~~~k~~A~~v~~~  247 (248)
                      ++++.+..++.|+++..+
T Consensus       472 ~g~~~~~~~~~Ad~vi~~  489 (556)
T TIGR01525       472 MGAGSDVAIEAADIVLLN  489 (556)
T ss_pred             eCCCCHHHHHhCCEEEeC
Confidence            999999999999998753

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=97.23  E-value=0.00054  Score=54.13  Aligned_cols=45  Identities=20%  Similarity=0.292  Sum_probs=34.8

Q ss_pred             ccceEEEEecCCCCCCCCCC---------CCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            5 KQGLLALFDVDGTLTAPRKA---------ATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~---------i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      +..|+++||.||||......         +-+.+.+.|++|+++ ++++++|..+
T Consensus         1 ~~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~   55 (181)
T PRK08942          1 KSMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS   55 (181)
T ss_pred             CCccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            35799999999998765421         245568899999888 8889888764

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.23  E-value=0.00028  Score=55.54  Aligned_cols=42  Identities=21%  Similarity=0.348  Sum_probs=34.5

Q ss_pred             eEEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            8 LLALFDVDGTLTAPRK--------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         8 kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      |++|+|.||||+...+        .+-+.+.++|++|+++ ++++++|..+
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~   52 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQS   52 (176)
T ss_pred             CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            7999999999995422        2356789999999999 9999999775

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.21  E-value=0.00032  Score=54.42  Aligned_cols=39  Identities=36%  Similarity=0.550  Sum_probs=30.1

Q ss_pred             eEEEEecCCCCCCCCC-----------C-CCHHHHHHHHHHhhc-CeEEEEc
Q 038498            8 LLALFDVDGTLTAPRK-----------A-ATPQMLEFMRELRKV-VTVGVVG   46 (248)
Q Consensus         8 kli~~DlDGTLl~~~~-----------~-i~~~~~~al~~l~~~-~~v~iaT   46 (248)
                      |+++||+||||+.+.+           . +.+.+.++|++|.+. +.++|+|
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT   52 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT   52 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence            6899999999996532           1 355789999999999 9999998

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=97.20  E-value=0.00035  Score=64.68  Aligned_cols=80  Identities=19%  Similarity=0.320  Sum_probs=61.9

Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      +++..+.....+.++++   +..     .+-++.|  -+|...++.+.+ .++++++||    +.||+++++.+| .+++
T Consensus       385 vTgd~~~~a~~i~~~lg---i~~-----~f~~~~p--~~K~~~i~~l~~~~~~v~~vGD----g~nD~~al~~A~-vgia  449 (536)
T TIGR01512       385 LTGDRRAVAERVARELG---IDE-----VHAELLP--EDKLEIVKELREKYGPVAMVGD----GINDAPALAAAD-VGIA  449 (536)
T ss_pred             EcCCCHHHHHHHHHHcC---Chh-----hhhccCc--HHHHHHHHHHHhcCCEEEEEeC----CHHHHHHHHhCC-EEEE
Confidence            35556666667777764   111     1112334  489999999987 778999999    999999999999 9999


Q ss_pred             cc-CchhhHHHHhhhhc
Q 038498          230 VT-SPEDTMEKCKALFL  245 (248)
Q Consensus       230 v~-Na~~~~k~~A~~v~  245 (248)
                      ++ ++++..+..|+.++
T Consensus       450 ~g~~~~~~~~~~ad~vl  466 (536)
T TIGR01512       450 MGASGSDVAIETADVVL  466 (536)
T ss_pred             eCCCccHHHHHhCCEEE
Confidence            99 78999999999887

.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=97.17  E-value=0.0012  Score=56.41  Aligned_cols=53  Identities=23%  Similarity=0.342  Sum_probs=43.2

Q ss_pred             cceEEEEecCCCCCCCCC------------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498            6 QGLLALFDVDGTLTAPRK------------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG   58 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~   58 (248)
                      +.+++++|+||||....+            .+.+.+.++|++|+++ +.++++|||+.......+.
T Consensus       157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~  222 (300)
T PHA02530        157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVE  222 (300)
T ss_pred             CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHH
Confidence            468999999999997432            4678899999999999 9999999999765444433

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=97.13  E-value=0.00094  Score=52.04  Aligned_cols=45  Identities=33%  Similarity=0.455  Sum_probs=35.8

Q ss_pred             ccccceEEEEecCCCCCCCC-CCCCHHHHHHHHHHhhc-C--eEEEEcC
Q 038498            3 ARKQGLLALFDVDGTLTAPR-KAATPQMLEFMRELRKV-V--TVGVVGG   47 (248)
Q Consensus         3 ~~~~~kli~~DlDGTLl~~~-~~i~~~~~~al~~l~~~-~--~v~iaTG   47 (248)
                      .+..+|+++||+|+||+.+. ..++++..+.++++++. .  .++|+|-
T Consensus        37 k~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSN   85 (168)
T PF09419_consen   37 KKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSN   85 (168)
T ss_pred             hhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence            35689999999999999765 46999999999999876 3  3555554

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=97.12  E-value=0.0012  Score=51.92  Aligned_cols=52  Identities=19%  Similarity=0.222  Sum_probs=38.9

Q ss_pred             ceEEEEecCCCCCCCC--------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCC-ChHHHHHHhc
Q 038498            7 GLLALFDVDGTLTAPR--------------------------KAATPQMLEFMRELRKV-VTVGVVGGS-DLSKISEQLG   58 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR-~~~~~~~~l~   58 (248)
                      +|+++||+|+||-++.                          -.+-+.+.+.|+.|+++ ++++++|++ +...+...+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~   81 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG   81 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence            5899999999998631                          01245779999999999 999999988 5544443333

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=97.11  E-value=0.011  Score=48.60  Aligned_cols=38  Identities=24%  Similarity=0.315  Sum_probs=31.5

Q ss_pred             EEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhh
Q 038498          181 FDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFES  222 (248)
Q Consensus       181 ~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~  222 (248)
                      -...|.+.-|+..|+.+.+        ..+++++||    |.||+-....
T Consensus       142 C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGD----G~nD~Cp~~~  187 (234)
T PF06888_consen  142 CSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGD----GRNDFCPALR  187 (234)
T ss_pred             CCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECC----CCCCcCcccc
Confidence            3466788899999999986        368999999    9999977654

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PTZ00445 p36-lilke protein; Provisional

Probab=97.11  E-value=0.00058  Score=54.76  Aligned_cols=45  Identities=20%  Similarity=0.136  Sum_probs=37.8

Q ss_pred             cccceEEEEecCCCCCC-----CCCC----------CCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498            4 RKQGLLALFDVDGTLTA-----PRKA----------ATPQMLEFMRELRKV-VTVGVVGGS   48 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~-----~~~~----------i~~~~~~al~~l~~~-~~v~iaTGR   48 (248)
                      +.++|+|++|+|.||+.     ....          ++++....+.+|.+. +.|+++|=.
T Consensus        40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfS  100 (219)
T PTZ00445         40 ECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFS  100 (219)
T ss_pred             HcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEcc
Confidence            36799999999999998     3222          688899999999999 999999944

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.07  E-value=0.0019  Score=52.84  Aligned_cols=55  Identities=20%  Similarity=0.216  Sum_probs=42.8

Q ss_pred             ccceEEEEecCCCCCCCC--------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCCChHH---HH
Q 038498            5 KQGLLALFDVDGTLTAPR--------------------------KAATPQMLEFMRELRKV-VTVGVVGGSDLSK---IS   54 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~---~~   54 (248)
                      .+.-+++||+|.|+|.+.                          ....+.++++++.++++ +.|+++|||+...   ..
T Consensus        75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~  154 (229)
T TIGR01675        75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL  154 (229)
T ss_pred             CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence            466899999999999732                          12356789999999999 9999999999654   44


Q ss_pred             HHhcc
Q 038498           55 EQLGK   59 (248)
Q Consensus        55 ~~l~~   59 (248)
                      +.|..
T Consensus       155 ~nL~~  159 (229)
T TIGR01675       155 DNLIN  159 (229)
T ss_pred             HHHHH
Confidence            55544

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=97.07  E-value=0.00062  Score=66.50  Aligned_cols=53  Identities=25%  Similarity=0.413  Sum_probs=48.9

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      -+|..-++.+.+ -+.|.++||    +-||.++|+.|+ .|+||+++++..|++||.|+
T Consensus       589 e~K~~iV~~lq~~G~vVam~GD----GvNDapALk~Ad-VGIAmg~gtdvAk~aADiVL  642 (867)
T TIGR01524       589 MQKSRIIGLLKKAGHTVGFLGD----GINDAPALRKAD-VGISVDTAADIAKEASDIIL  642 (867)
T ss_pred             HHHHHHHHHHHhCCCEEEEECC----CcccHHHHHhCC-EEEEeCCccHHHHHhCCEEE
Confidence            689999999887 446899999    999999999999 99999999999999999987

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=97.06  E-value=0.00065  Score=51.64  Aligned_cols=56  Identities=25%  Similarity=0.288  Sum_probs=42.3

Q ss_pred             cccceEEEEecCCCCCCCC------C----CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498            4 RKQGLLALFDVDGTLTAPR------K----AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK   59 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~------~----~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~   59 (248)
                      .+++|++++|+||||++-.      +    .+....=..|+.|.+. +++.|.|||.-+.+.+....
T Consensus         5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~   71 (170)
T COG1778           5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAKD   71 (170)
T ss_pred             hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHHH
Confidence            4689999999999999742      1    2333445677888888 99999999987766665554

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.06  E-value=0.00059  Score=67.84  Aligned_cols=54  Identities=20%  Similarity=0.235  Sum_probs=48.4

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~~  246 (248)
                      -+|..-++.+.+ -+.+.++||    +.||.+|++.|+ .|+||+ ++.+..|++|++|+.
T Consensus       732 ~~K~~iV~~lq~~g~~Vam~GD----GvNDapaLk~Ad-VGIAmg~~gt~vak~aADivl~  787 (1053)
T TIGR01523       732 QTKVKMIEALHRRKAFCAMTGD----GVNDSPSLKMAN-VGIAMGINGSDVAKDASDIVLS  787 (1053)
T ss_pred             HHHHHHHHHHHhcCCeeEEeCC----CcchHHHHHhCC-ccEecCCCccHHHHHhcCEEEe
Confidence            578888888887 556999999    999999999999 999998 799999999999874

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.05  E-value=0.0012  Score=50.75  Aligned_cols=43  Identities=19%  Similarity=0.326  Sum_probs=35.5

Q ss_pred             EEEEecCCCCCCCCC--C---------CCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            9 LALFDVDGTLTAPRK--A---------ATPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         9 li~~DlDGTLl~~~~--~---------i~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      .|++|+||||+.++-  .         .-+.+.+..+.+.++ ++++..|+|+..
T Consensus         1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~   55 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIG   55 (157)
T ss_pred             CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHH
Confidence            389999999998851  1         235568899999999 999999999975

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=97.02  E-value=0.0063  Score=60.87  Aligned_cols=56  Identities=18%  Similarity=0.239  Sum_probs=47.1

Q ss_pred             EeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          183 VFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +.|  -.|..-++.|.+ -.-|.++||    +.||.++|+.|. .|+||+++  ++..+|++++..
T Consensus       785 ~sP--~qK~~iV~~lq~~g~~V~m~GD----G~ND~~ALK~Ad-VGIam~~~--das~AA~f~l~~  841 (1054)
T TIGR01657       785 MAP--DQKETLVELLQKLDYTVGMCGD----GANDCGALKQAD-VGISLSEA--EASVAAPFTSKL  841 (1054)
T ss_pred             cCH--HHHHHHHHHHHhCCCeEEEEeC----ChHHHHHHHhcC-cceeeccc--cceeecccccCC
Confidence            555  689999999988 556999999    999999999998 99999987  355678877643

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.01  E-value=0.0027  Score=53.07  Aligned_cols=66  Identities=21%  Similarity=0.279  Sum_probs=46.9

Q ss_pred             ccceEEEEecCCCCCCCCCC--C-CHHHHHHHHHHhhc--CeEEEEcCCChH--HHHHHhcccccCCCceEEecC
Q 038498            5 KQGLLALFDVDGTLTAPRKA--A-TPQMLEFMRELRKV--VTVGVVGGSDLS--KISEQLGKTVIDEYDYVFSEN   72 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~--i-~~~~~~al~~l~~~--~~v~iaTGR~~~--~~~~~l~~~~~~~~~~~i~~n   72 (248)
                      .....|+||||.||+.+...  | .+.+.+.|.+|++.  +.+.+..|-.--  .-.+.++.  ...|+.+||.+
T Consensus       120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L--~~~Fd~ii~~G  192 (297)
T PF05152_consen  120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKL--EGYFDIIICGG  192 (297)
T ss_pred             CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCC--ccccEEEEeCC
Confidence            35679999999999988654  3 67889999999999  677777776532  33444443  34577666543

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=96.99  E-value=0.0013  Score=54.26  Aligned_cols=29  Identities=24%  Similarity=0.280  Sum_probs=20.9

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      .+.+++|||    +.+|+...+.+|..++.|.-
T Consensus       184 ~~i~I~IGD----s~~Di~aA~~AGi~~I~v~~  212 (237)
T PRK11009        184 KNIRIFYGD----SDNDITAAREAGARGIRILR  212 (237)
T ss_pred             cCCeEEEcC----CHHHHHHHHHcCCcEEEEec
Confidence            334778888    88888888888866666544

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=96.98  E-value=0.0022  Score=58.96  Aligned_cols=46  Identities=24%  Similarity=0.349  Sum_probs=37.5

Q ss_pred             ccceEEEEecCCCCCCCCC-----------C-CCHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498            5 KQGLLALFDVDGTLTAPRK-----------A-ATPQMLEFMRELRKV-VTVGVVGGSDL   50 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~-----------~-i~~~~~~al~~l~~~-~~v~iaTGR~~   50 (248)
                      .+.|+++||+||||+.+.+           . +-+.+.++|++|+++ +.++|+|..+-
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g  224 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG  224 (526)
T ss_pred             ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence            4579999999999997532           1 356789999999999 99999997554

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=96.95  E-value=0.00085  Score=66.21  Aligned_cols=59  Identities=24%  Similarity=0.325  Sum_probs=51.7

Q ss_pred             EEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhcc
Q 038498          181 FDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFLA  246 (248)
Q Consensus       181 ~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~~  246 (248)
                      .++.|  -+|..-++.|.+ -+.|.++||    +-||.++++.|. .|+||+ ++.+..|++||+|+-
T Consensus       650 ar~sP--e~K~~iV~~lq~~g~vVam~GD----GvNDapALk~Ad-VGIAmg~~gtdvAk~aADivL~  710 (941)
T TIGR01517       650 ARSSP--LDKQLLVLMLKDMGEVVAVTGD----GTNDAPALKLAD-VGFSMGISGTEVAKEASDIILL  710 (941)
T ss_pred             EECCH--HHHHHHHHHHHHCCCEEEEECC----CCchHHHHHhCC-cceecCCCccHHHHHhCCEEEe
Confidence            34444  689999999987 446999999    999999999999 999999 899999999999874

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK06769 hypothetical protein; Validated

Probab=96.93  E-value=0.00095  Score=52.46  Aligned_cols=44  Identities=14%  Similarity=0.144  Sum_probs=36.3

Q ss_pred             cceEEEEecCCCCCCCCC-------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            6 QGLLALFDVDGTLTAPRK-------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~-------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      .+|+|++|.||||-.++.       .+-+.+.+.|++|+++ ++++++|+.+
T Consensus         3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~   54 (173)
T PRK06769          3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP   54 (173)
T ss_pred             CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence            689999999999965522       2457789999999999 9999999764

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=96.93  E-value=0.00086  Score=66.51  Aligned_cols=54  Identities=17%  Similarity=0.188  Sum_probs=47.2

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~~  246 (248)
                      -+|..-++.+.+ -.-|.++||    +.||.+|++.|+ .|+||++ +++-.|++||+|+.
T Consensus       670 eqK~~IV~~lq~~g~vv~~~GD----G~ND~paLk~Ad-VGiamg~~G~~vak~aADivL~  725 (997)
T TIGR01106       670 QQKLIIVEGCQRQGAIVAVTGD----GVNDSPALKKAD-IGVAMGIAGSDVSKQAADMILL  725 (997)
T ss_pred             HHHHHHHHHHHHCCCEEEEECC----CcccHHHHhhCC-cceecCCcccHHHHHhhceEEe
Confidence            478888888876 446899999    999999999999 9999995 79999999999874

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=96.92  E-value=0.0017  Score=53.06  Aligned_cols=30  Identities=17%  Similarity=0.313  Sum_probs=19.6

Q ss_pred             HHHHHHHHHhhc-CeEEEEcCCChHHHHHHh
Q 038498           28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQL   57 (248)
Q Consensus        28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l   57 (248)
                      .+.++|.+|+++ +.++++|+.+...+...+
T Consensus        90 Gv~~~l~~L~~~~i~~avaS~s~~~~~~~~L  120 (221)
T COG0637          90 GVVELLEQLKARGIPLAVASSSPRRAAERVL  120 (221)
T ss_pred             cHHHHHHHHHhcCCcEEEecCChHHHHHHHH
Confidence            346667777777 777888877755444444

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=96.89  E-value=0.0011  Score=62.66  Aligned_cols=79  Identities=16%  Similarity=0.200  Sum_probs=60.9

Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccC-CEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFN-EIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~-~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +...+.-...+..+++   +.     ....+..|  -+|..-++.+.+.. -|.+.||    +-||.+.|+.++ .|+||
T Consensus       468 TGDn~~TA~aIA~elG---Id-----~v~A~~~P--edK~~iV~~lQ~~G~~VaMtGD----GvNDAPALa~AD-VGIAM  532 (679)
T PRK01122        468 TGDNPLTAAAIAAEAG---VD-----DFLAEATP--EDKLALIRQEQAEGRLVAMTGD----GTNDAPALAQAD-VGVAM  532 (679)
T ss_pred             CCCCHHHHHHHHHHcC---Cc-----EEEccCCH--HHHHHHHHHHHHcCCeEEEECC----CcchHHHHHhCC-EeEEe
Confidence            3444455556666654   11     12334555  58999999998744 5899999    999999999999 99999


Q ss_pred             cCchhhHHHHhhhhc
Q 038498          231 TSPEDTMEKCKALFL  245 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~  245 (248)
                      +++++..|++||.|+
T Consensus       533 gsGTdvAkeAADiVL  547 (679)
T PRK01122        533 NSGTQAAKEAGNMVD  547 (679)
T ss_pred             CCCCHHHHHhCCEEE
Confidence            999999999999987

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=96.88  E-value=0.0015  Score=48.14  Aligned_cols=55  Identities=16%  Similarity=0.266  Sum_probs=44.6

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc---cCchhhHHHHhhhhccC
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTV---TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av---~Na~~~~k~~A~~v~~~  247 (248)
                      -.|..-++.|.+ .+.++++||    +-||+.|++.+. .++++   +++++.+...|++|.+.
T Consensus        80 e~K~~ii~eLkk~~~k~vmVGn----GaND~laLr~AD-lGI~tiq~e~v~~r~l~~ADvvik~  138 (152)
T COG4087          80 EMKAKIIRELKKRYEKVVMVGN----GANDILALREAD-LGICTIQQEGVPERLLLTADVVLKE  138 (152)
T ss_pred             HHHHHHHHHhcCCCcEEEEecC----CcchHHHhhhcc-cceEEeccCCcchHHHhhchhhhhh
Confidence            457777777775 578999999    999999999998 88765   45778888888888765

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=96.85  E-value=0.0011  Score=64.91  Aligned_cols=58  Identities=22%  Similarity=0.353  Sum_probs=51.1

Q ss_pred             EEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          181 FDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       181 ~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      ..+.|  -+|..-++.|.+ -+-|.+.||    +-||.+.|+.|. .|+||++++|..|++||.|+
T Consensus       619 Ar~sP--e~K~~IV~~Lq~~G~vVam~GD----GvNDaPALk~AD-VGIAmg~gtdvAkeaADiVL  677 (902)
T PRK10517        619 ARLTP--MHKERIVTLLKREGHVVGFMGD----GINDAPALRAAD-IGISVDGAVDIAREAADIIL  677 (902)
T ss_pred             EEcCH--HHHHHHHHHHHHCCCEEEEECC----CcchHHHHHhCC-EEEEeCCcCHHHHHhCCEEE
Confidence            34444  679999999887 445899999    999999999999 99999999999999999987

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=96.82  E-value=0.0012  Score=64.84  Aligned_cols=59  Identities=27%  Similarity=0.405  Sum_probs=51.9

Q ss_pred             EEEEeeCCCCHHHHHHHhhccC-CEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          180 SFDVFPQGWDKTYCLRYLDDFN-EIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~~~-~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      +.++.|  -+|..-++.|.+.. -|.++||    +-||.+.|+.|. .|+||+++++-.|++||.|+
T Consensus       618 fAr~sP--e~K~~iV~~Lq~~G~vVamtGD----GvNDaPALk~AD-VGIAmg~gtdvAkeaADiVL  677 (903)
T PRK15122        618 FAKLTP--LQKSRVLKALQANGHTVGFLGD----GINDAPALRDAD-VGISVDSGADIAKESADIIL  677 (903)
T ss_pred             EEEeCH--HHHHHHHHHHHhCCCEEEEECC----CchhHHHHHhCC-EEEEeCcccHHHHHhcCEEE
Confidence            344555  68999999998744 5889999    999999999999 99999999999999999987

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=96.81  E-value=0.0016  Score=50.56  Aligned_cols=38  Identities=16%  Similarity=0.086  Sum_probs=30.0

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK  241 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A  241 (248)
                      ++++++|||    +.+|+.+.+.+|+.++++....-.---+|
T Consensus       120 ~~e~l~IGD----~~~Di~~A~~aGi~~i~~~~~~~~~~~~~  157 (161)
T TIGR01261       120 KARSYVIGD----RETDMQLAENLGIRGIQYDEEELNWDMIA  157 (161)
T ss_pred             HHHeEEEeC----CHHHHHHHHHCCCeEEEEChhhcCHHHHH
Confidence            678999999    99999999999988888776654333333

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=96.81  E-value=0.0014  Score=63.26  Aligned_cols=59  Identities=25%  Similarity=0.336  Sum_probs=52.1

Q ss_pred             EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      +.++.|  -+|..-++.+.+ -+-|.++||    +-||.+.|+.|+ .|+||+++++..|+.|+.|+
T Consensus       515 fAr~~P--e~K~~iV~~lq~~G~~VamvGD----GvNDapAL~~Ad-VGIAm~~gtdvAkeaADivL  574 (755)
T TIGR01647       515 FAEVFP--EHKYEIVEILQKRGHLVGMTGD----GVNDAPALKKAD-VGIAVAGATDAARSAADIVL  574 (755)
T ss_pred             EEecCH--HHHHHHHHHHHhcCCEEEEEcC----CcccHHHHHhCC-eeEEecCCcHHHHHhCCEEE
Confidence            445566  579999999987 456999999    999999999999 99999999999999999987

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=96.75  E-value=0.0014  Score=61.96  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=59.8

Q ss_pred             cchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccC-CEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          153 NIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFN-EIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       153 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~-~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      ...+.-...+.++++   +.     ..+.++.|  -+|..-++.+.+.. -|.+.||    +-||.+.|+.|+ .|+||+
T Consensus       465 GDn~~TA~aIA~elG---I~-----~v~A~~~P--edK~~iV~~lQ~~G~~VaMtGD----GvNDAPALa~AD-VGIAMg  529 (673)
T PRK14010        465 GDNELTAATIAKEAG---VD-----RFVAECKP--EDKINVIREEQAKGHIVAMTGD----GTNDAPALAEAN-VGLAMN  529 (673)
T ss_pred             CCCHHHHHHHHHHcC---Cc-----eEEcCCCH--HHHHHHHHHHHhCCCEEEEECC----ChhhHHHHHhCC-EEEEeC
Confidence            344444555555544   11     12334455  68999999998744 5889999    999999999999 999999


Q ss_pred             CchhhHHHHhhhhc
Q 038498          232 SPEDTMEKCKALFL  245 (248)
Q Consensus       232 Na~~~~k~~A~~v~  245 (248)
                      ++.+..|++|+.|+
T Consensus       530 sGTdvAkeAADiVL  543 (673)
T PRK14010        530 SGTMSAKEAANLID  543 (673)
T ss_pred             CCCHHHHHhCCEEE
Confidence            99999999999987

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=96.69  E-value=0.002  Score=63.21  Aligned_cols=54  Identities=19%  Similarity=0.266  Sum_probs=48.1

Q ss_pred             CCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhc
Q 038498          187 GWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFL  245 (248)
Q Consensus       187 ~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~  245 (248)
                      .-+|..-++.+.+ .+.++++||    +.||.++++.|+ .|++|+ ++.+..|+.|++|+
T Consensus       603 P~~K~~iv~~lq~~g~~v~mvGD----GvND~pAl~~Ad-VGia~g~~g~~va~~aaDivl  658 (884)
T TIGR01522       603 PEHKMKIVKALQKRGDVVAMTGD----GVNDAPALKLAD-IGVAMGQTGTDVAKEAADMIL  658 (884)
T ss_pred             HHHHHHHHHHHHHCCCEEEEECC----CcccHHHHHhCC-eeEecCCCcCHHHHHhcCEEE
Confidence            3678888888877 567999999    999999999999 999998 58999999999987

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=96.66  E-value=0.0031  Score=52.99  Aligned_cols=47  Identities=17%  Similarity=0.220  Sum_probs=36.8

Q ss_pred             ccceEEEEecCCCCCCCC----------CC----------------CCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            5 KQGLLALFDVDGTLTAPR----------KA----------------ATPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~----------~~----------------i~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      .+..+|+||||+|+++..          ..                +-+.+.+.|+.|+++ +.++++|+|+..
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~  146 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEK  146 (266)
T ss_pred             CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            456799999999999643          11                234568899999999 999999999843

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=96.59  E-value=0.003  Score=53.00  Aligned_cols=54  Identities=22%  Similarity=0.271  Sum_probs=42.2

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhcc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLGK   59 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~~   59 (248)
                      ++++.++||+||||.... ..-+...++|++|+++ .++++.|-.+-   ..+.++|..
T Consensus         6 ~~y~~~l~DlDGvl~~G~-~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~   63 (269)
T COG0647           6 DKYDGFLFDLDGVLYRGN-EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS   63 (269)
T ss_pred             hhcCEEEEcCcCceEeCC-ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence            567899999999999764 4566779999999999 98888876553   346666655

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.58  E-value=0.0019  Score=63.50  Aligned_cols=60  Identities=22%  Similarity=0.261  Sum_probs=51.9

Q ss_pred             EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhcc
Q 038498          180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFLA  246 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~~  246 (248)
                      +..+.|  -+|..-++.|.+ -+-|.++||    +-||.+|++.|+ .|++|+. +.|..|++|+.|+.
T Consensus       619 fARvsP--~qK~~IV~~lq~~g~vVamtGD----GvNDapALk~AD-VGIamg~~Gtdaak~Aadivl~  680 (917)
T COG0474         619 FARVSP--EQKARIVEALQKSGHVVAMTGD----GVNDAPALKAAD-VGIAMGGEGTDAAKEAADIVLL  680 (917)
T ss_pred             EEEcCH--HHHHHHHHHHHhCCCEEEEeCC----CchhHHHHHhcC-ccEEecccHHHHHHhhcceEee
Confidence            344555  789999999998 455899999    999999999999 9999995 99999999998873

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.48  E-value=0.003  Score=59.97  Aligned_cols=79  Identities=19%  Similarity=0.313  Sum_probs=65.1

Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +...+.-.+.+..+++   +.     ....++.|  -+|...++.|.+ -..++++||    +-||-+.|..+. .|+||
T Consensus       560 TGDn~~~A~~iA~~lG---Id-----~v~AellP--edK~~~V~~l~~~g~~VamVGD----GINDAPALA~Ad-VGiAm  624 (713)
T COG2217         560 TGDNRRTAEAIAKELG---ID-----EVRAELLP--EDKAEIVRELQAEGRKVAMVGD----GINDAPALAAAD-VGIAM  624 (713)
T ss_pred             cCCCHHHHHHHHHHcC---hH-----hheccCCc--HHHHHHHHHHHhcCCEEEEEeC----CchhHHHHhhcC-eeEee
Confidence            4455666677777765   21     23455777  689999999997 568999999    999999999998 99999


Q ss_pred             cCchhhHHHHhhhhc
Q 038498          231 TSPEDTMEKCKALFL  245 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~  245 (248)
                      +.++|-.++.||.|+
T Consensus       625 G~GtDvA~eaADvvL  639 (713)
T COG2217         625 GSGTDVAIEAADVVL  639 (713)
T ss_pred             cCCcHHHHHhCCEEE
Confidence            999999999999987

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=96.40  E-value=0.0013  Score=54.15  Aligned_cols=47  Identities=28%  Similarity=0.325  Sum_probs=37.3

Q ss_pred             ccceEEEEecCCCCCCCC--------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            5 KQGLLALFDVDGTLTAPR--------------------------KAATPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      .+..+|+||||+|+|++.                          ...-+.+++.++.++++ +.|+++|||+-.
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~  143 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPES  143 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred             CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence            467899999999999521                          11234578999999999 999999999865

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=96.35  E-value=0.0067  Score=46.32  Aligned_cols=52  Identities=17%  Similarity=0.195  Sum_probs=37.6

Q ss_pred             ceEEEEecCCCCCCCCC--------------------------CCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhc
Q 038498            7 GLLALFDVDGTLTAPRK--------------------------AATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLG   58 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~   58 (248)
                      .+++++||||||++...                          .+-+.+.+.|+.|++.+.++|+|+.+...+...+.
T Consensus         2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~   79 (148)
T smart00577        2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLD   79 (148)
T ss_pred             CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHH
Confidence            57899999999998631                          01245678888887339999999888775554444

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=96.34  E-value=0.002  Score=53.30  Aligned_cols=41  Identities=12%  Similarity=-0.001  Sum_probs=31.5

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCc
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na  233 (248)
                      .+.......++     ++++++|||    + ..|+...+.+|+.++++...
T Consensus       164 P~p~~~~~a~~~~~~~~~~~~~VGD----~~~~Di~~A~~aG~~~i~v~~~  210 (238)
T PRK10748        164 PFSDMYHLAAEKLNVPIGEILHVGD----DLTTDVAGAIRCGMQACWINPE  210 (238)
T ss_pred             CcHHHHHHHHHHcCCChhHEEEEcC----CcHHHHHHHHHCCCeEEEEcCC
Confidence            34445554443     889999999    9 59999999999888888664

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.32  E-value=0.0043  Score=47.82  Aligned_cols=47  Identities=26%  Similarity=0.314  Sum_probs=32.3

Q ss_pred             eEEEEecCCCCCCCCCC-------------------CCHHHHHHHHHHhhcCeEEEEcCCChHHHH
Q 038498            8 LLALFDVDGTLTAPRKA-------------------ATPQMLEFMRELRKVVTVGVVGGSDLSKIS   54 (248)
Q Consensus         8 kli~~DlDGTLl~~~~~-------------------i~~~~~~al~~l~~~~~v~iaTGR~~~~~~   54 (248)
                      |++++||||||++....                   +=|...+.|+.+.+...+++.|..+.....
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~   66 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAE   66 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhh
Confidence            78999999999976432                   245678889888555899999988865433

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=96.31  E-value=0.0035  Score=50.17  Aligned_cols=43  Identities=19%  Similarity=0.125  Sum_probs=36.7

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      ..+-.|...++.+++     +++++++||    |.+|++|++.+| .+++|..
T Consensus       151 ~~g~~K~~~l~~~~~~~~~~~~~~~~~gD----s~~D~~~~~~a~-~~~~v~~  198 (202)
T TIGR01490       151 CKGEGKVHALAELLAEEQIDLKDSYAYGD----SISDLPLLSLVG-HPYVVNP  198 (202)
T ss_pred             CCChHHHHHHHHHHHHcCCCHHHcEeeeC----CcccHHHHHhCC-CcEEeCC
Confidence            346678888988875     568999999    999999999999 9988764

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01686 FkbH FkbH-like domain

Probab=96.29  E-value=0.013  Score=50.66  Aligned_cols=54  Identities=15%  Similarity=0.199  Sum_probs=43.0

Q ss_pred             cceEEEEecCCCCCCCC---C--------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498            6 QGLLALFDVDGTLTAPR---K--------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK   59 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~---~--------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~   59 (248)
                      .+|+|++|+|+||....   .        ..-+.+.+.|++|+++ +.++++|..+...+.+.+..
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~   67 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER   67 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence            47999999999998641   1        1236789999999999 99999999998766665553

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=96.14  E-value=0.014  Score=45.84  Aligned_cols=40  Identities=25%  Similarity=0.332  Sum_probs=33.2

Q ss_pred             eCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          185 PQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       185 ~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      +.+..|...++.+.+  ++++++|||    +.||+.+.+.++ ..+|
T Consensus       145 ~~g~~K~~~~~~~~~~~~~~~i~iGD----~~~D~~aa~~~d-~~~a  186 (188)
T TIGR01489       145 PCGCCKGKVIHKLSEPKYQHIIYIGD----GVTDVCPAKLSD-VVFA  186 (188)
T ss_pred             CCCCCHHHHHHHHHhhcCceEEEECC----CcchhchHhcCC-cccc
Confidence            455778888888875  788999999    999999999887 5544

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=96.11  E-value=0.0022  Score=51.28  Aligned_cols=28  Identities=11%  Similarity=0.351  Sum_probs=22.3

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMREL   36 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l   36 (248)
                      +|+||+||||+++...+.....++++++
T Consensus         2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~   29 (197)
T TIGR01548         2 ALVLDMDGVMADVSQSYRRAIIDTVEHF   29 (197)
T ss_pred             ceEEecCceEEechHHHHHHHHHHHHHH
Confidence            6899999999999766666666777665

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.10  E-value=0.0087  Score=47.17  Aligned_cols=41  Identities=20%  Similarity=0.288  Sum_probs=34.6

Q ss_pred             ceEEEEecCCCCCCCCC-C--------CCHHHHHHHHHHhhc-CeEEEEcC
Q 038498            7 GLLALFDVDGTLTAPRK-A--------ATPQMLEFMRELRKV-VTVGVVGG   47 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~-~--------i~~~~~~al~~l~~~-~~v~iaTG   47 (248)
                      .|++|+|-||||..+.+ .        +.+.+++++..|.+. ++++++|-
T Consensus         5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN   55 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN   55 (181)
T ss_pred             CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence            78999999999997755 2        356779999999998 99999984

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=96.05  E-value=0.011  Score=49.38  Aligned_cols=46  Identities=22%  Similarity=0.292  Sum_probs=36.2

Q ss_pred             cceEEEEecCCCCCCC---------------------------CCCCCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            6 QGLLALFDVDGTLTAP---------------------------RKAATPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~---------------------------~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      ..-+++||+|+|+++.                           ..+..+.+++.++.+++. +.|+++|||+-.
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~  173 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKD  173 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            3478999999999932                           012345678899999999 999999999854

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=96.04  E-value=0.015  Score=50.28  Aligned_cols=47  Identities=23%  Similarity=0.317  Sum_probs=33.4

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHHhh-----cCeEEEE---cCCChHHHHHH
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMRELRK-----VVTVGVV---GGSDLSKISEQ   56 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~-----~~~v~ia---TGR~~~~~~~~   56 (248)
                      +++||+||||.+... +-+...++|+.|+.     ...+.+.   +|++..+..+.
T Consensus         2 ~~ifD~DGvL~~g~~-~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~   56 (321)
T TIGR01456         2 GFAFDIDGVLFRGKK-PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE   56 (321)
T ss_pred             EEEEeCcCceECCcc-ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence            589999999998755 47788999998887     4444444   46666554443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=95.87  E-value=0.011  Score=51.80  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=36.4

Q ss_pred             cceEEEEecCCCCCCCC-----------CCCCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498            6 QGLLALFDVDGTLTAPR-----------KAATPQMLEFMRELRKV-VTVGVVGGS   48 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~-----------~~i~~~~~~al~~l~~~-~~v~iaTGR   48 (248)
                      +.|++++|-||||+...           -.+-+.+.++|..|+++ ++++|+|..
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq   55 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ   55 (354)
T ss_pred             CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence            46899999999999862           23567789999999999 999999984

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=95.86  E-value=0.014  Score=45.60  Aligned_cols=50  Identities=28%  Similarity=0.401  Sum_probs=31.4

Q ss_pred             cceEEEEecCCCCCCCC--------------C-----------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHH
Q 038498            6 QGLLALFDVDGTLTAPR--------------K-----------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISE   55 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~--------------~-----------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~   55 (248)
                      -.|||+||||+||-+.-              +           .+-+.+..+|++|+++ +++++||=-+.+++.+
T Consensus         2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~   77 (169)
T PF12689_consen    2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWAR   77 (169)
T ss_dssp             S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHH
T ss_pred             CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHH
Confidence            47999999999998531              0           1345678999999999 9999999656555443

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=95.83  E-value=0.0052  Score=49.95  Aligned_cols=40  Identities=3%  Similarity=-0.159  Sum_probs=30.7

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      -.+.......++     ++++++|||    +.+|+...+.+|+..+.+.
T Consensus       142 KP~p~~~~~a~~~~~~~p~~~l~igD----s~~di~aA~~aG~~~i~~~  186 (221)
T PRK10563        142 KPDPALMFHAAEAMNVNVENCILVDD----SSAGAQSGIAAGMEVFYFC  186 (221)
T ss_pred             CCChHHHHHHHHHcCCCHHHeEEEeC----cHhhHHHHHHCCCEEEEEC
Confidence            334555665554     789999999    9999999999996666563

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=95.81  E-value=0.019  Score=45.88  Aligned_cols=51  Identities=20%  Similarity=0.263  Sum_probs=37.8

Q ss_pred             cccccceEEEEecCCCCCCCCC-------CCCHHHHHHHHHHhhcCeEEEEcCCChHH
Q 038498            2 AARKQGLLALFDVDGTLTAPRK-------AATPQMLEFMRELRKVVTVGVVGGSDLSK   52 (248)
Q Consensus         2 ~~~~~~kli~~DlDGTLl~~~~-------~i~~~~~~al~~l~~~~~v~iaTGR~~~~   52 (248)
                      ..+.+.|++++|||+||++...       ..=|...+.|+.+.+...++|=|..+..-
T Consensus        16 ~~~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~y   73 (195)
T TIGR02245        16 PPREGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKW   73 (195)
T ss_pred             CCCCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHH
Confidence            3456779999999999998632       12456788888888887777777776543

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=95.73  E-value=0.0092  Score=47.04  Aligned_cols=37  Identities=11%  Similarity=-0.012  Sum_probs=28.0

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +....+.+++     ++++++|||    +..|+...+.+|+.++.|
T Consensus       143 ~p~~~~~~~~~~~~~~~~~l~vgD----~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       143 SPQAYEKALREAGVDPERAIFFDD----SARNIAAAKALGMKTVLV  184 (184)
T ss_pred             CHHHHHHHHHHhCCCccceEEEeC----CHHHHHHHHHcCCEEeeC
Confidence            3344555443     889999999    999999999999655543

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=95.72  E-value=0.014  Score=58.39  Aligned_cols=54  Identities=19%  Similarity=0.274  Sum_probs=44.7

Q ss_pred             CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh-hHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED-TMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~-~~k~~A~~v~~  246 (248)
                      -.|+.-++.+.+  ..-|+++||    +.||.+|++.|. .|+++.+.+. .++.+||+++.
T Consensus       754 ~qK~~IV~~lk~~~~~~vl~iGD----G~ND~~mlk~Ad-VGIgi~g~eg~qA~~aaD~~i~  810 (1057)
T TIGR01652       754 SQKADVVRLVKKSTGKTTLAIGD----GANDVSMIQEAD-VGVGISGKEGMQAVMASDFAIG  810 (1057)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeC----CCccHHHHhhcC-eeeEecChHHHHHHHhhhhhhh
Confidence            578888888876  456999999    999999999998 9999876654 47888988763

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=95.66  E-value=0.013  Score=45.05  Aligned_cols=33  Identities=18%  Similarity=0.353  Sum_probs=23.3

Q ss_pred             CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498           26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG   58 (248)
Q Consensus        26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~   58 (248)
                      .+.+.++|++|+++ ++++++|+.+...+...+.
T Consensus        79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~  112 (176)
T PF13419_consen   79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVLE  112 (176)
T ss_dssp             STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHH
T ss_pred             hhhhhhhhhhcccccceeEEeecCCccccccccc
Confidence            44567788888878 8999998888765444333

...

>PRK09449 dUMP phosphatase; Provisional

Probab=95.32  E-value=0.015  Score=47.33  Aligned_cols=28  Identities=11%  Similarity=-0.124  Sum_probs=24.4

Q ss_pred             cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEcc
Q 038498          200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVT  231 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~  231 (248)
                      ++++++|||    +. +|+...+.+|+.++.+.
T Consensus       168 ~~~~~~vgD----~~~~Di~~A~~aG~~~i~~~  196 (224)
T PRK09449        168 RSRVLMVGD----NLHSDILGGINAGIDTCWLN  196 (224)
T ss_pred             cccEEEEcC----CcHHHHHHHHHCCCcEEEEC
Confidence            468999999    98 79999999997777775

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=95.28  E-value=0.02  Score=54.48  Aligned_cols=53  Identities=23%  Similarity=0.322  Sum_probs=48.2

Q ss_pred             CCHHHHHHHhhccCC-EEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhc
Q 038498          188 WDKTYCLRYLDDFNE-IHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFL  245 (248)
Q Consensus       188 ~~K~~al~~l~~~~~-~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~  245 (248)
                      -+|-.-++.|.+.++ +.+-||    +-||-+.|+.|. .|+||| |+.+..|++++-|+
T Consensus       664 ~HK~kIVeaLq~~geivAMTGD----GVNDApALK~Ad-IGIAMG~~GTdVaKeAsDMVL  718 (972)
T KOG0202|consen  664 QHKLKIVEALQSRGEVVAMTGD----GVNDAPALKKAD-IGIAMGISGTDVAKEASDMVL  718 (972)
T ss_pred             hhHHHHHHHHHhcCCEEEecCC----Cccchhhhhhcc-cceeecCCccHhhHhhhhcEE
Confidence            678889999998554 777899    999999999999 999999 99999999999987

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=95.27  E-value=0.041  Score=43.87  Aligned_cols=27  Identities=15%  Similarity=0.095  Sum_probs=18.5

Q ss_pred             HHHHHHHHHhhc-CeEEEEcCCChHHHH
Q 038498           28 QMLEFMRELRKV-VTVGVVGGSDLSKIS   54 (248)
Q Consensus        28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~   54 (248)
                      .+.+.|+.++++ ++++++||.....+.
T Consensus        91 ~~~~~l~~l~~~g~~v~ivS~s~~~~v~  118 (202)
T TIGR01490        91 EARDLIRWHKAEGHTIVLVSASLTILVK  118 (202)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence            446666677777 888888887754333

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=95.12  E-value=0.057  Score=41.67  Aligned_cols=53  Identities=23%  Similarity=0.268  Sum_probs=36.7

Q ss_pred             ccceEEEEecCCCCCCCCCC--C---------------------------------CHHHHHHHHHHhhcCeEEEEcCCC
Q 038498            5 KQGLLALFDVDGTLTAPRKA--A---------------------------------TPQMLEFMRELRKVVTVGVVGGSD   49 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~--i---------------------------------~~~~~~al~~l~~~~~v~iaTGR~   49 (248)
                      .+.+.+++|||.||+++...  .                                 -|...+.|+++.+.+.+++.|..+
T Consensus         4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~~   83 (156)
T TIGR02250         4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMGT   83 (156)
T ss_pred             CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCCc
Confidence            46788999999999986432  1                                 135577787777448888888887


Q ss_pred             hHHHHHHh
Q 038498           50 LSKISEQL   57 (248)
Q Consensus        50 ~~~~~~~l   57 (248)
                      .....+.+
T Consensus        84 ~~yA~~vl   91 (156)
T TIGR02250        84 RAYAQAIA   91 (156)
T ss_pred             HHHHHHHH
Confidence            65443333

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=95.08  E-value=0.064  Score=41.62  Aligned_cols=50  Identities=20%  Similarity=0.194  Sum_probs=36.1

Q ss_pred             eEEEEecCCCCCCCCCCC------------------------CHHHHHHHHHHhhcCeEEEEcCCChHHHHHHh
Q 038498            8 LLALFDVDGTLTAPRKAA------------------------TPQMLEFMRELRKVVTVGVVGGSDLSKISEQL   57 (248)
Q Consensus         8 kli~~DlDGTLl~~~~~i------------------------~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l   57 (248)
                      +.+++|||+||+++....                        =|...+.|..+.+...++|.|..+.....+.+
T Consensus         2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il   75 (162)
T TIGR02251         2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVL   75 (162)
T ss_pred             cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHH
Confidence            689999999999874321                        23468899998766888888887765443333

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=94.89  E-value=0.029  Score=43.97  Aligned_cols=16  Identities=31%  Similarity=0.507  Sum_probs=13.9

Q ss_pred             eEEEEecCCCCCCCCC
Q 038498            8 LLALFDVDGTLTAPRK   23 (248)
Q Consensus         8 kli~~DlDGTLl~~~~   23 (248)
                      -+|+||+||||++.+.
T Consensus         2 ~~iiFD~dgTL~~~~~   17 (188)
T TIGR01489         2 VVVVSDFDGTITLNDS   17 (188)
T ss_pred             eEEEEeCCCcccCCCc
Confidence            4799999999998855

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PLN03190 aminophospholipid translocase; Provisional

Probab=94.70  E-value=0.043  Score=55.39  Aligned_cols=53  Identities=17%  Similarity=0.257  Sum_probs=40.6

Q ss_pred             CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch-hhHHHHhhhhc
Q 038498          188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE-DTMEKCKALFL  245 (248)
Q Consensus       188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~-~~~k~~A~~v~  245 (248)
                      ..|+.-++.+.+  ..-+++|||    |.||.+|++.|. .||++..-+ -.++.+||+..
T Consensus       857 ~QKa~IV~~vk~~~~~vtlaIGD----GaNDv~mIq~Ad-VGIGIsG~EG~qA~~aSDfaI  912 (1178)
T PLN03190        857 LQKAGIVALVKNRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMASDFAM  912 (1178)
T ss_pred             HHHHHHHHHHHhcCCcEEEEECC----CcchHHHHHhcC-eeeeecCchhHHHHHhhccch
Confidence            478777777776  346999999    999999999998 999875432 14666777765

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=94.61  E-value=0.027  Score=45.09  Aligned_cols=63  Identities=14%  Similarity=0.139  Sum_probs=40.7

Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCH--HHHHHHhh-ccCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDK--TYCLRYLD-DFNEIHFFGDKTYKGGNDHEIFESER  224 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K--~~al~~l~-~~~~~~aiGD~~~~~~NDi~M~~~~g  224 (248)
                      ++........+...++--...+.. +. .    .+.-.|  ...++.|. ++++|+++||    +.||++|++.||
T Consensus       150 TGD~~~~a~~~~~~lgi~~~~v~a-~~-~----~kP~~k~~~~~i~~l~~~~~~v~~vGD----g~nD~~al~~Ag  215 (215)
T PF00702_consen  150 TGDNESTASAIAKQLGIFDSIVFA-RV-I----GKPEPKIFLRIIKELQVKPGEVAMVGD----GVNDAPALKAAG  215 (215)
T ss_dssp             ESSEHHHHHHHHHHTTSCSEEEEE-SH-E----TTTHHHHHHHHHHHHTCTGGGEEEEES----SGGHHHHHHHSS
T ss_pred             eccccccccccccccccccccccc-cc-c----ccccchhHHHHHHHHhcCCCEEEEEcc----CHHHHHHHHhCc
Confidence            444455555666665411121221 11 1    445667  77888877 4789999999    999999999886

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=94.55  E-value=0.044  Score=52.64  Aligned_cols=60  Identities=20%  Similarity=0.314  Sum_probs=54.2

Q ss_pred             eEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          179 ISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       179 ~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      -+.|+.|  ..|..=++.|.+ ...+.++||    +-||-+.|..+. .|++++.+++-..+.|+.|+
T Consensus       765 V~aev~P--~~K~~~Ik~lq~~~~~VaMVGD----GINDaPALA~Ad-VGIaig~gs~vAieaADIVL  825 (951)
T KOG0207|consen  765 VYAEVLP--EQKAEKIKEIQKNGGPVAMVGD----GINDAPALAQAD-VGIAIGAGSDVAIEAADIVL  825 (951)
T ss_pred             EEeccCc--hhhHHHHHHHHhcCCcEEEEeC----CCCccHHHHhhc-cceeeccccHHHHhhCCEEE
Confidence            3456777  789999999997 678999999    999999999998 99999999999999999987

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=94.48  E-value=0.013  Score=45.70  Aligned_cols=27  Identities=4%  Similarity=-0.152  Sum_probs=20.0

Q ss_pred             HHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhh
Q 038498          192 YCLRYLDD-FNEIHFFGDKTYKGGNDHEIFES  222 (248)
Q Consensus       192 ~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~  222 (248)
                      .+++.+.- ++++++|||    +..|+...+.
T Consensus       147 ~~~~~~~~~p~~~l~vgD----~~~Di~~A~~  174 (175)
T TIGR01493       147 LVFDTVGLPPDRVLMVAA----HQWDLIGARK  174 (175)
T ss_pred             HHHHHHCCCHHHeEeEec----ChhhHHHHhc
Confidence            34444432 899999999    9999987764

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=94.47  E-value=0.073  Score=35.42  Aligned_cols=31  Identities=16%  Similarity=0.043  Sum_probs=28.4

Q ss_pred             cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCch
Q 038498          200 FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       200 ~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na~  234 (248)
                      ++++++|||    + ..|+.+.+.+|+.++.|..+.
T Consensus        21 ~~~~~~VGD----~~~~Di~~a~~~G~~~ilV~tG~   52 (75)
T PF13242_consen   21 PSRCVMVGD----SLETDIEAAKAAGIDTILVLTGV   52 (75)
T ss_dssp             GGGEEEEES----STTTHHHHHHHTTSEEEEESSSS
T ss_pred             HHHEEEEcC----CcHhHHHHHHHcCCcEEEECCCC
Confidence            889999999    9 999999999999999988743

...

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=94.06  E-value=0.035  Score=51.92  Aligned_cols=40  Identities=28%  Similarity=0.462  Sum_probs=33.1

Q ss_pred             CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      .-|+.-++.|.+  ...+.||||    ++||.+|.++|. .|+++..
T Consensus       767 tQKA~v~~llq~~t~krvc~IGD----GGNDVsMIq~A~-~GiGI~g  808 (1051)
T KOG0210|consen  767 TQKAQVVRLLQKKTGKRVCAIGD----GGNDVSMIQAAD-VGIGIVG  808 (1051)
T ss_pred             hHHHHHHHHHHHhhCceEEEEcC----CCccchheeecc-cceeeec
Confidence            567777777776  778999999    999999999987 7877654

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=93.74  E-value=0.16  Score=40.33  Aligned_cols=50  Identities=16%  Similarity=0.221  Sum_probs=32.3

Q ss_pred             CHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-C-chhhHHHHhhh
Q 038498          189 DKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-S-PEDTMEKCKAL  243 (248)
Q Consensus       189 ~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-N-a~~~~k~~A~~  243 (248)
                      .|+.+|+.+++   ...++++||    +.||++|...+. .-++.+ | -.+.+|.-|++
T Consensus       159 gKa~~i~~lrk~~~~~~~~mvGD----GatDlea~~pa~-afi~~~g~~~r~~vk~nak~  213 (227)
T KOG1615|consen  159 GKAEVIALLRKNYNYKTIVMVGD----GATDLEAMPPAD-AFIGFGGNVIREGVKANAKW  213 (227)
T ss_pred             ccHHHHHHHHhCCChheeEEecC----CccccccCCchh-hhhccCCceEcHhhHhccHH
Confidence            57777777776   567889999    999999888654 222222 2 34455555544

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=93.68  E-value=0.081  Score=41.57  Aligned_cols=29  Identities=31%  Similarity=0.412  Sum_probs=26.0

Q ss_pred             CHHHHHHHh---h----ccCCEEEEcCCCCCCCCCHHHHh
Q 038498          189 DKTYCLRYL---D----DFNEIHFFGDKTYKGGNDHEIFE  221 (248)
Q Consensus       189 ~K~~al~~l---~----~~~~~~aiGD~~~~~~NDi~M~~  221 (248)
                      +|...++.+   .    ....++++||    |.||++||+
T Consensus       157 ~K~~~l~~~~~~~~~~~~~~~~~~iGD----s~~D~~~lr  192 (192)
T PF12710_consen  157 GKAEALKELYIRDEEDIDPDRVIAIGD----SINDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHHHHHHTHTCCEEEEEES----SGGGHHHHH
T ss_pred             cHHHHHHHHHHHhhcCCCCCeEEEEEC----CHHHHHHhC
Confidence            699999999   2    2788999999    999999986

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=93.61  E-value=0.097  Score=41.63  Aligned_cols=13  Identities=31%  Similarity=0.593  Sum_probs=10.5

Q ss_pred             eE-EEEecCCCCCC
Q 038498            8 LL-ALFDVDGTLTA   20 (248)
Q Consensus         8 kl-i~~DlDGTLl~   20 (248)
                      |+ |++||||||++
T Consensus         2 ~i~I~iDiDgVLad   15 (191)
T PF06941_consen    2 KIRIAIDIDGVLAD   15 (191)
T ss_dssp             -EEEEEESBTTTB-
T ss_pred             CcEEEEECCCCCcc
Confidence            67 99999999997

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=93.28  E-value=0.081  Score=48.65  Aligned_cols=49  Identities=20%  Similarity=0.253  Sum_probs=41.7

Q ss_pred             CCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          187 GWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       187 ~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      .-.|..-++.+.+ ...++++||    +.||.++++.++ .|++|+     .++.|+.++
T Consensus       392 p~~K~~~v~~l~~~g~~v~~vGD----g~nD~~al~~Ad-vgia~~-----a~~~adivl  441 (499)
T TIGR01494       392 PEEKAALVEALQKKGRVVAMTGD----GVNDAPALKKAD-VGIAMG-----AKAAADIVL  441 (499)
T ss_pred             HHHHHHHHHHHHHCCCEEEEECC----ChhhHHHHHhCC-Cccccc-----hHHhCCeEE
Confidence            3678888888876 457999999    999999999999 999997     477788876

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=93.22  E-value=0.047  Score=43.93  Aligned_cols=40  Identities=15%  Similarity=0.136  Sum_probs=34.5

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL  243 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~  243 (248)
                      ++++++|||    +..|+.+.+.+|+.++.+.+.......++..
T Consensus       169 ~~~~l~i~D----~~~di~aA~~aG~~~i~v~~~~~~~~~l~~~  208 (211)
T TIGR02247       169 PEECVFLDD----LGSNLKPAAALGITTIKVSDEEQAIHDLEKA  208 (211)
T ss_pred             HHHeEEEcC----CHHHHHHHHHcCCEEEEECCHHHHHHHHHHH
Confidence            889999999    9999999999998999998877666666554

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=92.90  E-value=0.087  Score=42.71  Aligned_cols=31  Identities=19%  Similarity=-0.009  Sum_probs=25.3

Q ss_pred             cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498          200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~  234 (248)
                      ++++++|||    +. ||+.-.+.+|+.+|.+....
T Consensus       171 p~~~l~VgD----~~~~di~gA~~~G~~~vwi~~~~  202 (229)
T COG1011         171 PEEALFVGD----SLENDILGARALGMKTVWINRGG  202 (229)
T ss_pred             cceEEEECC----ChhhhhHHHHhcCcEEEEECCCC
Confidence            889999999    75 56599999998888777643

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=92.73  E-value=0.066  Score=47.43  Aligned_cols=72  Identities=10%  Similarity=0.153  Sum_probs=43.9

Q ss_pred             ccceEEEEecCCCCCCCCCC--C---------CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecC
Q 038498            5 KQGLLALFDVDGTLTAPRKA--A---------TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSEN   72 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~--i---------~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~n   72 (248)
                      ...|+|++||||||+.++.-  +         ...+....-+.-.+ +++..-|.|++-.....-.-      =..|++|
T Consensus       373 ~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsy------lrnieQn  446 (580)
T COG5083         373 NNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSY------LRNIEQN  446 (580)
T ss_pred             CCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhH------HHhhhhc
Confidence            45689999999999987631  1         22334444455556 89999999998543221111      0235666


Q ss_pred             CcEEEeCCcE
Q 038498           73 GLVAHKDGKL   82 (248)
Q Consensus        73 Ga~i~~~~~~   82 (248)
                      |..+.+++-+
T Consensus       447 gykLpdgpvi  456 (580)
T COG5083         447 GYKLPDGPVI  456 (580)
T ss_pred             CccCCCCCEe
Confidence            6655554433

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=92.68  E-value=0.53  Score=37.10  Aligned_cols=15  Identities=33%  Similarity=0.468  Sum_probs=12.4

Q ss_pred             cceEEEEecCCCCCC
Q 038498            6 QGLLALFDVDGTLTA   20 (248)
Q Consensus         6 ~~kli~~DlDGTLl~   20 (248)
                      +.-.|++|+|||+.-
T Consensus         2 kk~vi~sDFDGTITl   16 (220)
T COG4359           2 KKPVIFSDFDGTITL   16 (220)
T ss_pred             CceEEEecCCCceEe
Confidence            446799999999984

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=92.43  E-value=0.048  Score=43.57  Aligned_cols=30  Identities=27%  Similarity=0.236  Sum_probs=23.2

Q ss_pred             ceEEEEecCCCCCCCCCCC----CHHHHHHHHHH
Q 038498            7 GLLALFDVDGTLTAPRKAA----TPQMLEFMREL   36 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i----~~~~~~al~~l   36 (248)
                      +++|+||.||||+.....+    .......+.++
T Consensus         1 i~~i~fDktGTLt~~~~~v~~~~~~~~~~~~~~~   34 (215)
T PF00702_consen    1 IDAICFDKTGTLTQGKMSVAPPSNEAALAIAAAL   34 (215)
T ss_dssp             ESEEEEECCTTTBESHHEEESCSHHHHHHHHHHH
T ss_pred             CeEEEEecCCCcccCeEEEEeccHHHHHHHHHHh
Confidence            5799999999999887777    55556666555

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=92.27  E-value=0.11  Score=51.76  Aligned_cols=50  Identities=18%  Similarity=0.260  Sum_probs=39.6

Q ss_pred             EEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          180 SFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      .+-+-....-|+.-++.+.+  ..-++||||    +.||++|.+.|+ .||+++..+
T Consensus       772 ViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGD----GANDVsMIQ~Ah-VGVGIsG~E  823 (1151)
T KOG0206|consen  772 VICCRVSPLQKALVVKLVKKGLKAVTLAIGD----GANDVSMIQEAH-VGVGISGQE  823 (1151)
T ss_pred             EEEccCCHHHHHHHHHHHHhcCCceEEEeeC----CCccchheeeCC-cCeeeccch
Confidence            33444455778888888865  678999999    999999999998 888887643

>COG4996 Predicted phosphatase [General function prediction only]

Probab=91.76  E-value=0.67  Score=34.46  Aligned_cols=51  Identities=22%  Similarity=0.194  Sum_probs=36.1

Q ss_pred             eEEEEecCCCCCCCCC------------------------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498            8 LLALFDVDGTLTAPRK------------------------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG   58 (248)
Q Consensus         8 kli~~DlDGTLl~~~~------------------------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~   58 (248)
                      ++|+||+||||-+..+                        .+-+.+++.++-++.. +.+..+|=.-.....+.+.
T Consensus         1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLr   76 (164)
T COG4996           1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALR   76 (164)
T ss_pred             CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHH
Confidence            4799999999997421                        1234678888888888 8888888776654444443

>PLN02811 hydrolase

Probab=91.53  E-value=0.27  Score=39.93  Aligned_cols=52  Identities=17%  Similarity=0.126  Sum_probs=37.5

Q ss_pred             HHHHHHh----hccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch--hhHHHHhhhhcc
Q 038498          191 TYCLRYL----DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE--DTMEKCKALFLA  246 (248)
Q Consensus       191 ~~al~~l----~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~--~~~k~~A~~v~~  246 (248)
                      -.+++.+    .+++++++|||    +..|+.+.+.+|+.++.|....  ......++++..
T Consensus       144 ~~a~~~~~~~~~~~~~~v~IgD----s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~  201 (220)
T PLN02811        144 LAAARRFEDGPVDPGKVLVFED----APSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLS  201 (220)
T ss_pred             HHHHHHhCCCCCCccceEEEec----cHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhc
Confidence            4566666    34789999999    9999999999998888886642  122234555543

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=91.41  E-value=0.15  Score=40.48  Aligned_cols=17  Identities=29%  Similarity=0.393  Sum_probs=14.5

Q ss_pred             ccceEEEEecCCCCCCC
Q 038498            5 KQGLLALFDVDGTLTAP   21 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~   21 (248)
                      .+.++++||+|-|++.+
T Consensus        14 ~~~~aVcFDvDSTvi~e   30 (227)
T KOG1615|consen   14 RSADAVCFDVDSTVIQE   30 (227)
T ss_pred             HhcCeEEEecCcchhHH
Confidence            35689999999999965

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=91.20  E-value=0.2  Score=45.53  Aligned_cols=53  Identities=21%  Similarity=0.218  Sum_probs=44.0

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      -+|-..++.-.. -.-+.+.||    +-||.+.|..+. .++||.++....|++|+-|-
T Consensus       496 EdK~~~I~~eQ~~grlVAMtGD----GTNDAPALAqAd-Vg~AMNsGTqAAkEAaNMVD  549 (681)
T COG2216         496 EDKLALIRQEQAEGRLVAMTGD----GTNDAPALAQAD-VGVAMNSGTQAAKEAANMVD  549 (681)
T ss_pred             HHHHHHHHHHHhcCcEEEEcCC----CCCcchhhhhcc-hhhhhccccHHHHHhhcccc
Confidence            456666665554 345888999    999999999999 99999999999999998763

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=90.81  E-value=0.47  Score=37.16  Aligned_cols=47  Identities=13%  Similarity=0.194  Sum_probs=33.1

Q ss_pred             ccceEEEEecCCCCCCCC---------------------------------CCCCHHHHHHHHHHhhc--CeEEEEcCCC
Q 038498            5 KQGLLALFDVDGTLTAPR---------------------------------KAATPQMLEFMRELRKV--VTVGVVGGSD   49 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~---------------------------------~~i~~~~~~al~~l~~~--~~v~iaTGR~   49 (248)
                      ++...+-||+|.|+|-+.                                 -.|+.+...-|..++++  -.++.+|||+
T Consensus        61 ~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt  140 (237)
T COG3700          61 RPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRT  140 (237)
T ss_pred             CCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCC
Confidence            456788899999999542                                 12455555555566666  7899999998


Q ss_pred             hH
Q 038498           50 LS   51 (248)
Q Consensus        50 ~~   51 (248)
                      ..
T Consensus       141 ~g  142 (237)
T COG3700         141 PG  142 (237)
T ss_pred             CC
Confidence            64

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=90.73  E-value=0.22  Score=38.58  Aligned_cols=41  Identities=20%  Similarity=0.242  Sum_probs=32.5

Q ss_pred             eEEEEecCCCCCCCCC-----------CCCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498            8 LLALFDVDGTLTAPRK-----------AATPQMLEFMRELRKV-VTVGVVGGS   48 (248)
Q Consensus         8 kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~-~~v~iaTGR   48 (248)
                      |+++||.||||....+           .+-+.+.++|++|+++ ++++++|-.
T Consensus         2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~   54 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQ   54 (161)
T ss_pred             CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence            7899999999998533           1235678899999888 888888865

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=90.59  E-value=0.24  Score=46.09  Aligned_cols=45  Identities=11%  Similarity=0.259  Sum_probs=35.8

Q ss_pred             ceEEEEecCCCCCCCCC--CC---------CHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            7 GLLALFDVDGTLTAPRK--AA---------TPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~--~i---------~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      .|+|+.|+|||++.++-  ++         -..+.+..-+..++ ++++..|.|+..
T Consensus       530 ~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIg  586 (738)
T KOG2116|consen  530 DKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIG  586 (738)
T ss_pred             CcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhh
Confidence            48999999999998862  22         23456777778888 999999999975

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=90.59  E-value=0.37  Score=35.79  Aligned_cols=49  Identities=14%  Similarity=0.099  Sum_probs=41.2

Q ss_pred             EEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcc
Q 038498           10 ALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK   59 (248)
Q Consensus        10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~   59 (248)
                      .+-++++|+... +++-+++.+.|++|++.+.+++|||-.+.++.+....
T Consensus        17 ~~~~v~~tiatg-Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~   65 (152)
T COG4087          17 KAGKVLYTIATG-GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEF   65 (152)
T ss_pred             ecceEEEEEccC-cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHH
Confidence            456788998854 7789999999999988899999999998887776664

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=90.50  E-value=0.44  Score=38.31  Aligned_cols=58  Identities=28%  Similarity=0.390  Sum_probs=42.7

Q ss_pred             CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhcc
Q 038498            1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLGK   59 (248)
Q Consensus         1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~~   59 (248)
                      |++-+.+|-+.+||-|||-.++.. .+...+|+.+|+.+ .+|-.+|--+-   ..+.++|..
T Consensus         1 m~~~~~v~gvLlDlSGtLh~e~~a-vpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~r   62 (262)
T KOG3040|consen    1 MSNGRAVKGVLLDLSGTLHIEDAA-VPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQR   62 (262)
T ss_pred             CCcccccceEEEeccceEeccccc-CCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHH
Confidence            566678999999999999998774 55669999999977 66666654443   345555544

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=90.00  E-value=0.34  Score=39.25  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=26.8

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMREL   36 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l   36 (248)
                      ..++.++||||.||.+....|...+.+-|.+.
T Consensus        13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f   44 (244)
T KOG3109|consen   13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEF   44 (244)
T ss_pred             ccceEEEEecccccccCchhHHHHHHHHHHHH
Confidence            35799999999999999888888887777654

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=89.17  E-value=0.24  Score=39.51  Aligned_cols=48  Identities=13%  Similarity=0.086  Sum_probs=35.9

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK  239 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~  239 (248)
                      -.+....+.+++     ++++++|||    +..|+...+.+|..++.+.++..--+.
T Consensus       141 KP~p~~~~~~~~~~~~~p~~~l~vgD----~~~di~aA~~aG~~~i~~~~~~~~~~~  193 (199)
T PRK09456        141 KPEARIYQHVLQAEGFSAADAVFFDD----NADNIEAANALGITSILVTDKQTIPDY  193 (199)
T ss_pred             CCCHHHHHHHHHHcCCChhHeEEeCC----CHHHHHHHHHcCCEEEEecCCccHHHH
Confidence            334444455443     899999999    999999999999888888886554333

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=89.16  E-value=0.18  Score=39.63  Aligned_cols=13  Identities=54%  Similarity=0.892  Sum_probs=12.0

Q ss_pred             EEEecCCCCCCCC
Q 038498           10 ALFDVDGTLTAPR   22 (248)
Q Consensus        10 i~~DlDGTLl~~~   22 (248)
                      ++||+||||+..+
T Consensus         1 v~fD~DGTL~~~~   13 (192)
T PF12710_consen    1 VIFDFDGTLTDSD   13 (192)
T ss_dssp             EEEESBTTTBSSH
T ss_pred             eEEecCcCeecCC
Confidence            6899999999887

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=88.95  E-value=0.5  Score=38.94  Aligned_cols=48  Identities=19%  Similarity=0.017  Sum_probs=38.4

Q ss_pred             HHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498          193 CLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL  243 (248)
Q Consensus       193 al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~  243 (248)
                      |++.+-- ++++++|||   -..||++-.+.+|.+++-|.|+....+.....
T Consensus       177 al~~l~v~Pee~vhIgD---~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~~  225 (237)
T KOG3085|consen  177 ALERLGVKPEECVHIGD---LLENDYEGARNLGWHAILVDNSITALKELEYK  225 (237)
T ss_pred             HHHHhCCChHHeEEecC---ccccccHhHHHcCCEEEEEccccchhhhhhhc
Confidence            4444443 999999999   23699999999999999999998887776543

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=88.40  E-value=0.31  Score=45.62  Aligned_cols=62  Identities=24%  Similarity=0.393  Sum_probs=52.5

Q ss_pred             EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      +..++|  -.|-.-++.|.+ ..-+-..||    +-||.+-++.+. .+++|++|.+..+.+++.|+.-|
T Consensus       565 fAgVfp--ehKy~iV~~Lq~r~hi~gmtgd----gvndapaLKkAd-igiava~atdaar~asdiVltep  627 (942)
T KOG0205|consen  565 FAGVFP--EHKYEIVKILQERKHIVGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEP  627 (942)
T ss_pred             ccccCH--HHHHHHHHHHhhcCceecccCC----Ccccchhhcccc-cceeeccchhhhcccccEEEcCC
Confidence            344555  568888888887 566888999    999999999999 99999999999999999998554

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=87.80  E-value=0.57  Score=37.55  Aligned_cols=16  Identities=25%  Similarity=0.337  Sum_probs=14.2

Q ss_pred             ceEEEEecCCCCCCCC
Q 038498            7 GLLALFDVDGTLTAPR   22 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~   22 (248)
                      +|+|+||+||||+++.
T Consensus         2 ik~viFDldGtL~d~~   17 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSP   17 (211)
T ss_pred             ceEEEEecCCceecCH
Confidence            5799999999999973

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=87.68  E-value=0.46  Score=35.97  Aligned_cols=40  Identities=10%  Similarity=-0.097  Sum_probs=32.3

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      -.|...++.+++     ++++++|||    +..|+...+.+|..++++.
T Consensus       101 KP~~~~~~~~~~~~~~~~~e~i~IGD----s~~Di~~A~~~Gi~~v~i~  145 (147)
T TIGR01656       101 KPKPGLILEALKRLGVDASRSLVVGD----RLRDLQAARNAGLAAVLLV  145 (147)
T ss_pred             CCCHHHHHHHHHHcCCChHHEEEEcC----CHHHHHHHHHCCCCEEEec
Confidence            456666666664     789999999    9999999999997777664

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=87.61  E-value=1.7  Score=39.42  Aligned_cols=56  Identities=21%  Similarity=0.267  Sum_probs=44.2

Q ss_pred             ccceEEEEecCCCCCCC----CC----CCC--------HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc
Q 038498            5 KQGLLALFDVDGTLTAP----RK----AAT--------PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT   60 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~----~~----~i~--------~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~   60 (248)
                      +..|.+++|||+||...    ++    +++        -...+.|..|+++ +.+++||=.......+.+..+
T Consensus       220 ~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh  292 (574)
T COG3882         220 KSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH  292 (574)
T ss_pred             cccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC
Confidence            35699999999999842    11    233        2457788889999 999999999999998888874

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=87.43  E-value=0.42  Score=45.93  Aligned_cols=39  Identities=21%  Similarity=0.354  Sum_probs=34.2

Q ss_pred             CEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhc
Q 038498          202 EIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFL  245 (248)
Q Consensus       202 ~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~  245 (248)
                      -|...||    +.||-+.|+.++ .|+|||- +++..|++||.|+
T Consensus       707 iVaVTGD----GVNDsPALKKAD-IGVAMGiaGSDvsKqAADmIL  746 (1019)
T KOG0203|consen  707 IVAVTGD----GVNDSPALKKAD-IGVAMGIAGSDVSKQAADMIL  746 (1019)
T ss_pred             EEEEeCC----CcCCChhhcccc-cceeeccccchHHHhhcceEE
Confidence            3667899    999999999999 9999976 7788888888876

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=87.40  E-value=0.56  Score=38.28  Aligned_cols=53  Identities=19%  Similarity=0.160  Sum_probs=35.5

Q ss_pred             CCCHHHHHHHhhc----cCCEEEEcCCCCCCCCCHHHHhhCCCce-EEcc-CchhhHHHHhhh
Q 038498          187 GWDKTYCLRYLDD----FNEIHFFGDKTYKGGNDHEIFESERTVG-HTVT-SPEDTMEKCKAL  243 (248)
Q Consensus       187 ~~~K~~al~~l~~----~~~~~aiGD~~~~~~NDi~M~~~~g~~~-~av~-Na~~~~k~~A~~  243 (248)
                      +.-|..-++.+++    ...++++||    |-.|..||+.+.-.| .||+ |+++...+.|+.
T Consensus       189 gg~ka~i~e~~~ele~~d~sa~~VGD----SItDv~ml~~~rgrGglAvaFNGNeYal~eAdV  247 (315)
T COG4030         189 GGEKAKIMEGYCELEGIDFSAVVVGD----SITDVKMLEAARGRGGLAVAFNGNEYALKEADV  247 (315)
T ss_pred             CcchhHHHHHHHhhcCCCcceeEecC----cccchHHHHHhhccCceEEEecCCcccccccce
Confidence            3567778888887    345799999    999999999652133 4443 455555444443

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=87.00  E-value=0.93  Score=33.38  Aligned_cols=37  Identities=16%  Similarity=-0.050  Sum_probs=28.0

Q ss_pred             HHHHHHHhhc------cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEc
Q 038498          190 KTYCLRYLDD------FNEIHFFGDKTYKG-GNDHEIFESERTVGHTV  230 (248)
Q Consensus       190 K~~al~~l~~------~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av  230 (248)
                      |...++.+++      ++++++|||    + .+|+.+.+.+|..++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~v~IGD----~~~~Di~~A~~~Gi~~i~~  130 (132)
T TIGR01662        87 KPGMFLEALKRFNEIDPEESVYVGD----QDLTDLQAAKRAGLAFILV  130 (132)
T ss_pred             ChHHHHHHHHHcCCCChhheEEEcC----CCcccHHHHHHCCCeEEEe
Confidence            4444444443      689999999    8 89999999999666654

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=86.95  E-value=0.32  Score=38.04  Aligned_cols=41  Identities=15%  Similarity=0.020  Sum_probs=30.1

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCce-EEccCc
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVG-HTVTSP  233 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~-~av~Na  233 (248)
                      .+...+...++     ++++++|||    +.+|+...+.+|+.. +++.-.
T Consensus       107 P~p~~~~~a~~~~~~~~~~~v~VGD----s~~Di~aA~~aG~~~~i~v~~g  153 (176)
T TIGR00213       107 PKPGMLLQARKELHIDMAQSYMVGD----KLEDMQAGVAAKVKTNVLVRTG  153 (176)
T ss_pred             CCHHHHHHHHHHcCcChhhEEEEcC----CHHHHHHHHHCCCcEEEEEecC
Confidence            34555555553     889999999    999999999999544 455443

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=86.78  E-value=0.6  Score=36.60  Aligned_cols=39  Identities=13%  Similarity=0.065  Sum_probs=30.7

Q ss_pred             HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ...+..+++     ++++++|||    +.+|+.+.+.+|+.++++...
T Consensus       106 p~~~~~~~~~l~~~~~~~~~VgD----s~~Di~~A~~aG~~~i~v~~g  149 (181)
T PRK08942        106 PGMLLSIAERLNIDLAGSPMVGD----SLRDLQAAAAAGVTPVLVRTG  149 (181)
T ss_pred             HHHHHHHHHHcCCChhhEEEEeC----CHHHHHHHHHCCCeEEEEcCC
Confidence            444444443     889999999    999999999999777777653

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=86.50  E-value=0.88  Score=43.83  Aligned_cols=49  Identities=22%  Similarity=0.273  Sum_probs=39.6

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK  241 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A  241 (248)
                      ..|..-|..|.+ ---++++||    +-||...++.|. .|+|.-|++++.++..
T Consensus       793 ~QKE~ii~tlK~~Gy~TLMCGD----GTNDVGALK~Ah-VGVALL~~~~e~~~~~  842 (1160)
T KOG0209|consen  793 KQKEFIITTLKKLGYVTLMCGD----GTNDVGALKQAH-VGVALLNNPEESKKDK  842 (1160)
T ss_pred             hhHHHHHHHHHhcCeEEEEecC----CCcchhhhhhcc-cceehhcCChhhhhHH
Confidence            456666666666 446999999    999999999998 9999999888665544

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=86.09  E-value=0.77  Score=44.32  Aligned_cols=54  Identities=20%  Similarity=0.292  Sum_probs=46.6

Q ss_pred             CCCHHHHHHHhhccCC-EEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhc
Q 038498          187 GWDKTYCLRYLDDFNE-IHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFL  245 (248)
Q Consensus       187 ~~~K~~al~~l~~~~~-~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~  245 (248)
                      ..+|-.-++-|.+..+ +.+-||    +-||-+.|+.|+ .|+|||- +.+..|+.+|+|+
T Consensus       724 P~DK~lLVk~L~~~g~VVAVTGD----GTNDaPALkeAD-VGlAMGIaGTeVAKEaSDIIi  779 (1034)
T KOG0204|consen  724 PNDKHLLVKGLIKQGEVVAVTGD----GTNDAPALKEAD-VGLAMGIAGTEVAKEASDIII  779 (1034)
T ss_pred             CchHHHHHHHHHhcCcEEEEecC----CCCCchhhhhcc-cchhccccchhhhhhhCCeEE
Confidence            4789999999988444 666799    999999999999 9999998 7788888888876

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=85.93  E-value=0.6  Score=42.91  Aligned_cols=39  Identities=18%  Similarity=0.054  Sum_probs=31.5

Q ss_pred             CHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          189 DKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       189 ~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      .|...++.... ....++.||    |.||.+||+.|+ +.++|..
T Consensus       176 ~Kv~rl~~~~g~~~~~~aYgD----S~sD~plL~~a~-e~y~V~~  215 (497)
T PLN02177        176 HKRDAVLKEFGDALPDLGLGD----RETDHDFMSICK-EGYMVPR  215 (497)
T ss_pred             HHHHHHHHHhCCCCceEEEEC----CccHHHHHHhCC-ccEEeCC
Confidence            48888875442 122389999    999999999999 9999988

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=85.76  E-value=1.1  Score=39.39  Aligned_cols=57  Identities=12%  Similarity=-0.000  Sum_probs=42.4

Q ss_pred             CCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          186 QGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       186 ~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      ..-.|...+..+++     ++++++|||    +.+|+...+.+|+.++.+.-+.-.-.+++++++.
T Consensus       102 ~rKP~p~~l~~a~~~l~v~~~~svmIGD----s~sDi~aAk~aGi~~I~v~~~~~~~~~i~~~l~~  163 (354)
T PRK05446        102 CRKPKTGLVEEYLAEGAIDLANSYVIGD----RETDVQLAENMGIKGIRYARETLNWDAIAEQLTK  163 (354)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccEEEEcC----CHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhc
Confidence            34455556666554     789999999    9999999999998888885555555566666553

>PRK06769 hypothetical protein; Validated

Probab=85.73  E-value=0.58  Score=36.57  Aligned_cols=30  Identities=13%  Similarity=0.061  Sum_probs=27.3

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|+...+.+|+.++++..+
T Consensus       110 p~~~i~IGD----~~~Di~aA~~aGi~~i~v~~g  139 (173)
T PRK06769        110 LTQCAVIGD----RWTDIVAAAKVNATTILVRTG  139 (173)
T ss_pred             HHHeEEEcC----CHHHHHHHHHCCCeEEEEecC
Confidence            889999999    999999999999888888764

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=84.84  E-value=0.77  Score=40.30  Aligned_cols=44  Identities=18%  Similarity=0.315  Sum_probs=33.6

Q ss_pred             ccceEEEEecCCCCCCCCC------------CCCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498            5 KQGLLALFDVDGTLTAPRK------------AATPQMLEFMRELRKV-VTVGVVGGS   48 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~-~~v~iaTGR   48 (248)
                      ...|.+.||+||||++...            -+-++.-.-|..+.+. +.++|.|--
T Consensus        73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq  129 (422)
T KOG2134|consen   73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQ  129 (422)
T ss_pred             CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecc
Confidence            4568999999999998754            1344556778888888 999988743

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=84.80  E-value=1.8  Score=34.38  Aligned_cols=15  Identities=20%  Similarity=0.468  Sum_probs=13.2

Q ss_pred             eEEEEecCCCCCCCC
Q 038498            8 LLALFDVDGTLTAPR   22 (248)
Q Consensus         8 kli~~DlDGTLl~~~   22 (248)
                      .+|+|||||||++.+
T Consensus         1 ~~viFDldgvL~d~~   15 (199)
T PRK09456          1 MLYIFDLGNVIVDID   15 (199)
T ss_pred             CEEEEeCCCccccCc
Confidence            489999999999874

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=84.61  E-value=0.65  Score=36.61  Aligned_cols=41  Identities=20%  Similarity=0.229  Sum_probs=35.9

Q ss_pred             eeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498          184 FPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT  229 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a  229 (248)
                      .+-|++|+..++.+.+ .+.++++||    |-.|++....+. +-+|
T Consensus       142 s~fG~dK~~vI~~l~e~~e~~fy~GD----svsDlsaaklsD-llFA  183 (220)
T COG4359         142 SQFGHDKSSVIHELSEPNESIFYCGD----SVSDLSAAKLSD-LLFA  183 (220)
T ss_pred             cccCCCcchhHHHhhcCCceEEEecC----CcccccHhhhhh-hHhh
Confidence            5679999999999999 777999999    999999998877 5554

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=84.28  E-value=0.81  Score=34.78  Aligned_cols=39  Identities=23%  Similarity=0.116  Sum_probs=31.6

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      -.+....+.+++     ++++++|||    +..|+.+.+.+|..++.|
T Consensus       133 Kp~~~~~~~~~~~~~~~p~~~~~vgD----~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  133 KPDPDAYRRALEKLGIPPEEILFVGD----SPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             TTSHHHHHHHHHHHTSSGGGEEEEES----SHHHHHHHHHTTSEEEEE
T ss_pred             hhHHHHHHHHHHHcCCCcceEEEEeC----CHHHHHHHHHcCCeEEeC
Confidence            444577777775     889999999    999999999999666653

...

>PRK10444 UMP phosphatase; Provisional

Probab=84.00  E-value=2  Score=35.72  Aligned_cols=31  Identities=19%  Similarity=-0.105  Sum_probs=27.8

Q ss_pred             cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498          200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~  234 (248)
                      ++++++|||    +. +|+.+.+.+|+.++.|..+.
T Consensus       191 ~~~~v~IGD----~~~tDi~~A~~~G~~~vlV~~G~  222 (248)
T PRK10444        191 SEETVIVGD----NLRTDILAGFQAGLETILVLSGV  222 (248)
T ss_pred             cccEEEECC----CcHHHHHHHHHcCCCEEEECCCC
Confidence            889999999    96 89999999999999987654

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=83.07  E-value=1.7  Score=36.66  Aligned_cols=30  Identities=17%  Similarity=-0.054  Sum_probs=27.0

Q ss_pred             cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    + ..|+.+.+.+|+.++.|..+
T Consensus       219 ~~~~lmIGD----~~~tDI~~A~~aGi~si~V~~G  249 (279)
T TIGR01452       219 PARTLMVGD----RLETDILFGHRCGMTTVLVLSG  249 (279)
T ss_pred             hhhEEEECC----ChHHHHHHHHHcCCcEEEECCC
Confidence            889999999    9 59999999999888888664

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=82.65  E-value=0.72  Score=35.94  Aligned_cols=42  Identities=12%  Similarity=-0.024  Sum_probs=32.9

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~  234 (248)
                      .+...+..+++     ++++++|||    +. .|+...+.+|+.++.|....
T Consensus        92 P~p~~~~~~l~~~~~~~~~~l~IGD----s~~~Di~aA~~aGi~~i~v~~g~  139 (170)
T TIGR01668        92 PPGCAFRRAHPEMGLTSEQVAVVGD----RLFTDVMGGNRNGSYTILVEPLV  139 (170)
T ss_pred             CChHHHHHHHHHcCCCHHHEEEECC----cchHHHHHHHHcCCeEEEEccCc
Confidence            34555666554     788999999    98 79999999998888886543

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=82.40  E-value=2.2  Score=35.19  Aligned_cols=33  Identities=18%  Similarity=0.238  Sum_probs=22.6

Q ss_pred             cccceEEEEecCCCCCCCC----------CCCCHHHHHHHHHH
Q 038498            4 RKQGLLALFDVDGTLTAPR----------KAATPQMLEFMREL   36 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~----------~~i~~~~~~al~~l   36 (248)
                      +.+.+.|+.|||-|+|+..          ...+|++.....+.
T Consensus        76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a  118 (274)
T COG2503          76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQA  118 (274)
T ss_pred             cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhh
Confidence            3456799999999999753          23456665555544

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=82.18  E-value=1  Score=38.22  Aligned_cols=41  Identities=7%  Similarity=-0.056  Sum_probs=31.3

Q ss_pred             CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      .-+..+++.+..  ++++++|||    +.+|+.+.+.+|+..++|.-
T Consensus       255 ~~~~~~l~~~~~~~~~~~~~vgD----~~~d~~~a~~~Gi~~i~v~~  297 (300)
T PHA02530        255 VVKEEIFWEKIAPKYDVLLAVDD----RDQVVDMWRRIGLECWQVAP  297 (300)
T ss_pred             HHHHHHHHHHhccCceEEEEEcC----cHHHHHHHHHhCCeEEEecC
Confidence            344556655442  589999999    99999999999977777743

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=82.06  E-value=1.7  Score=33.58  Aligned_cols=36  Identities=14%  Similarity=-0.057  Sum_probs=28.3

Q ss_pred             HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      ....+.+++     ++++++|||    +..|+.+.+.+|+.+++|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~vgD----~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       143 PDIYLLALKKLGLKPEECLFVDD----SPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             HHHHHHHHHHcCCCcceEEEEcC----CHHHHHHHHHcCCEEEeC
Confidence            455555554     889999999    999999999999656553

HAD subfamilies caused by an overly broad single model.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=81.85  E-value=1.5  Score=40.14  Aligned_cols=30  Identities=17%  Similarity=0.171  Sum_probs=23.3

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHH
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMR   34 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~   34 (248)
                      .....++||+||||+.+....+.=++-|++
T Consensus         6 ~~~~~~~fD~DGTLlrs~ssFpyFmlva~e   35 (498)
T PLN02499          6 TTSYSVVSELEGTLLKDADPFSYFMLVAFE   35 (498)
T ss_pred             cccceEEEecccceecCCCccHHHHHHHHH
Confidence            456789999999999977766666665665

>PLN02645 phosphoglycolate phosphatase

Probab=80.41  E-value=3  Score=35.88  Aligned_cols=30  Identities=20%  Similarity=0.031  Sum_probs=27.0

Q ss_pred             cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +. +|+.+.+.+|+.++.|..+
T Consensus       247 ~~~~~~VGD----~~~~Di~~A~~aG~~~ilV~~G  277 (311)
T PLN02645        247 KSQICMVGD----RLDTDILFGQNGGCKTLLVLSG  277 (311)
T ss_pred             cccEEEEcC----CcHHHHHHHHHcCCCEEEEcCC
Confidence            789999999    97 9999999999888888654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	248
2amy_A	246	X-Ray Structure Of Human Phosphomannomutase 2 (Pmm2		2e-81
2i54_A	247	Phosphomannomutase From Leishmania Mexicana Length		2e-76
3f9r_A	246	Crystal Structure Of Trypanosoma Brucei Phosphomann		6e-76
2fuc_A	262	Human Alpha-Phosphomannomutase 1 With Mg2+ Cofactor		3e-75

>pdb|2AMY|A Chain A, X-Ray Structure Of Human Phosphomannomutase 2 (Pmm2) Length = 246

Iteration: 1
 Score =  298 bits (763), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/238 (60%), Positives = 182/238 (76%), Gaps = 2/238 (0%)
Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
           L LFDVDGTLTAPR+  T +  +F+++LR+ + +GVVGGSD  K+ EQLG  V+++YDYV
Sbjct: 8   LCLFDVDGTLTAPRQKITKEXDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYV 67
Query: 69  FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
           F ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFIEFR+G L
Sbjct: 68  FPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGXL 127
Query: 129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGW 188
           N+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISFDVFP GW
Sbjct: 128 NVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGW 187
Query: 189 DKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
           DK YCLR++  D +  I+FFGDKT  GGNDHEIF   RT G++VT+PEDT   C+ LF
Sbjct: 188 DKRYCLRHVENDGYKTIYFFGDKTXPGGNDHEIFTDPRTXGYSVTAPEDTRRICELLF 245

>pdb|2I54|A Chain A, Phosphomannomutase From Leishmania Mexicana Length = 247

Iteration: 1
 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/238 (57%), Positives = 177/238 (74%), Gaps = 2/238 (0%)
Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDY 67
           + LFDVDGTLT PR   T  M E + + R     +GVVGGSD +K  EQLG+++++++DY
Sbjct: 6   ILLFDVDGTLTPPRNPETHDMKEALLKARAAGFKLGVVGGSDFAKQKEQLGESILEDFDY 65
Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM 127
           VFSENGL+A+KDGK     SL   LG EK+  F+   LH IADLDIP++RGTF+EFR+GM
Sbjct: 66  VFSENGLLAYKDGKEFHRNSLLRALGNEKVVAFVKKCLHLIADLDIPVQRGTFVEFRNGM 125
Query: 128 LNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187
            N+SPIGRNCSQ+ERDEFE  DK  +IR K++  L+E F    L +S+GGQISFDVFP+G
Sbjct: 126 FNVSPIGRNCSQQERDEFENLDKERHIREKLIRELKEAFPDYQLAYSVGGQISFDVFPKG 185
Query: 188 WDKTYCLRYL-DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
           WDKTYCL+++ +DF  IHFFGDKT +GGND+EIF   RT+GH+V + +DT+   +AL 
Sbjct: 186 WDKTYCLQFVENDFETIHFFGDKTSEGGNDYEIFTDSRTIGHSVKTYKDTIAILEALL 243

>pdb|3F9R|A Chain A, Crystal Structure Of Trypanosoma Brucei Phosphomannosemutase, Tb.10.700.370 Length = 246

Iteration: 1
 Score =  280 bits (716), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 133/242 (54%), Positives = 178/242 (73%), Gaps = 2/242 (0%)
Query: 8   LLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYD 66
           +L LFDVDGTLT PR   T +M   ++  R     VG VGGSD +K  EQLG+ V+ ++D
Sbjct: 5   VLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGRDVLTQFD 64
Query: 67  YVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG 126
           YVF+ENGL+A+++G  I  QSL + LG +++ +F+  TL  IADLDIP++RGTF+E+R+G
Sbjct: 65  YVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNG 124
Query: 127 MLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQ 186
           M+N+SPIGRNCSQ ERDEFE YD  H +R  +++ L   F    L +SIGGQISFDVFP 
Sbjct: 125 MINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFDVFPV 184
Query: 187 GWDKTYCLRYL-DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245
           GWDKTYCL+++ DDF EIHFFGDKT +GGND+EI+  +RT+GH VTS +DT+ + + +  
Sbjct: 185 GWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKIIA 244
Query: 246 AK 247
            K
Sbjct: 245 MK 246

>pdb|2FUC|A Chain A, Human Alpha-Phosphomannomutase 1 With Mg2+ Cofactor Bound Length = 262

Iteration: 1
 Score =  277 bits (709), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 138/250 (55%), Positives = 179/250 (71%), Gaps = 4/250 (1%)
Query: 2   AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK-- 59
           A RK+ +L LFDVDGTLT  R+   P++  F+++LR  V +GVVGGSD  KI+EQLG   
Sbjct: 8   ARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGD 67
Query: 60  TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGT 119
            VI+++DYVF+ENG V +K G+L+  Q++++ LG E L++ INF L Y A L +P KRGT
Sbjct: 68  EVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYXALLRLPKKRGT 127
Query: 120 FIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQI 179
           FIEFR+G LNISPIGR+C+ EER EF   DK   IR K V  L+ +FA   L FS GG I
Sbjct: 128 FIEFRNGXLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGXI 187
Query: 180 SFDVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTM 237
           SFDVFP+GWDK YCL  L  D F+ IHFFG++T  GGND EIF   RTVGH+V SP+DT+
Sbjct: 188 SFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTV 247
Query: 238 EKCKALFLAK 247
           ++C+ +F  +
Sbjct: 248 QRCREIFFPE 257

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	248
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	8e-76
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	3e-75
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	1e-73
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	5e-07
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	3e-06
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	7e-06
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	1e-04
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	1e-04
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	2e-04
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	4e-04

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A Length = 246

 Score =  229 bits (583), Expect = 8e-76
 Identities = 147/245 (60%), Positives = 187/245 (76%), Gaps = 2/245 (0%)

Query: 2   AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTV 61
           +A     L LFDVDGTLTAPR+  T +M +F+++LR+ + +GVVGGSD  K+ EQLG  V
Sbjct: 1   SAAPGPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDV 60

Query: 62  IDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFI 121
           +++YDYVF ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFI
Sbjct: 61  VEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFI 120

Query: 122 EFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISF 181
           EFR+GMLN+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISF
Sbjct: 121 EFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISF 180

Query: 182 DVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239
           DVFP GWDK YCLR++  D +  I+FFGDKT  GGNDHEIF   RT+G++VT+PEDT   
Sbjct: 181 DVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRI 240

Query: 240 CKALF 244
           C+ LF
Sbjct: 241 CELLF 245

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262

 Score =  228 bits (581), Expect = 3e-75
 Identities = 138/249 (55%), Positives = 180/249 (72%), Gaps = 4/249 (1%)

Query: 4   RKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT--V 61
           RK+ +L LFDVDGTLT  R+   P++  F+++LR  V +GVVGGSD  KI+EQLG    V
Sbjct: 10  RKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69

Query: 62  IDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFI 121
           I+++DYVF+ENG V +K G+L+  Q++++ LG E L++ INF L Y+A L +P KRGTFI
Sbjct: 70  IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFI 129

Query: 122 EFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISF 181
           EFR+GMLNISPIGR+C+ EER EF   DK   IR K V  L+ +FA   L FS GG ISF
Sbjct: 130 EFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISF 189

Query: 182 DVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239
           DVFP+GWDK YCL  L  D F+ IHFFG++T  GGND EIF   RTVGH+V SP+DT+++
Sbjct: 190 DVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQR 249

Query: 240 CKALFLAKP 248
           C+ +F  + 
Sbjct: 250 CREIFFPET 258

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246

 Score =  223 bits (569), Expect = 1e-73
 Identities = 132/241 (54%), Positives = 177/241 (73%), Gaps = 2/241 (0%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDY 67
           L LFDVDGTLT PR   T +M   ++  R     VG VGGSD +K  EQLG+ V+ ++DY
Sbjct: 6   LLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDY 65

Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM 127
           VF+ENGL+A+++G  I  QSL + LG +++ +F+  TL  IADLDIP++RGTF+E+R+GM
Sbjct: 66  VFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGM 125

Query: 128 LNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187
           +N+SPIGRNCSQ ERDEFE YD  H +R  +++ L   F    L +SIGGQISFDVFP G
Sbjct: 126 INVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFDVFPVG 185

Query: 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA 246
           WDKTYCL++++D F EIHFFGDKT +GGND+EI+  +RT+GH VTS +DT+ + + +   
Sbjct: 186 WDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKIIAM 245

Query: 247 K 247
           K
Sbjct: 246 K 246

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289

 Score = 48.7 bits (116), Expect = 5e-07
 Identities = 33/235 (14%), Positives = 76/235 (32%), Gaps = 27/235 (11%)

Query: 12  FDVDGTL-----TAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDE 64
            D D T         ++    ++ +++ +  K   + +G V GS +  I +++G+     
Sbjct: 27  CDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRY 86

Query: 65  Y-DYVFSENG---LVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           +  ++ S+ G       +           S +     KE +   +  + +    +     
Sbjct: 87  FPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNILLNPQT 146

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
              +S   +         Q+E ++ +    I  I  +    +     +  L         
Sbjct: 147 QLGKSRYKHNFYY---QEQDEINDKKNLLAIEKICEEYGVSVNINRCN-PLAGDPEDSYD 202

Query: 181 FDVFPQGWDKTYCLRYLDDF-----NEIHFFGDKTYKGGNDHEIFESERTVGHTV 230
            D  P G  K   + ++ +           FGD     GND  + ++   VG+  
Sbjct: 203 VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGD----SGNDVRMLQT---VGNGY 250

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258

 Score = 46.3 bits (111), Expect = 3e-06
 Identities = 42/231 (18%), Positives = 72/231 (31%), Gaps = 43/231 (18%)

Query: 12  FDVDGTLTAPRKAATPQMLEFMRELR----KVV------TVGVVGGSDLSKISEQLGKTV 61
           FD+DGTL   +K      +E +R L+     V                   + +QLG   
Sbjct: 8   FDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFE------HVRKQLG--- 58

Query: 62  IDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFI------NFTLHYIADLDIPI 115
               D   S NG     +G ++     K  L  EK++            L ++    +  
Sbjct: 59  ---IDSFVSFNGQYVVFEGNVL----YKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRA 111

Query: 116 KRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSI 175
             G        M ++            +  + Y  +   R +        +         
Sbjct: 112 SIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVRNYPEFRFVRW- 170

Query: 176 GGQISFDVFPQGWDKTYCLRYL-DDFN----EIHFFGDKTYKGGNDHEIFE 221
              +S DV P G  K   +R + +       +++ FGD    G ND E+  
Sbjct: 171 -HDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGD----GLNDIEMLS 216

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 40/239 (16%), Positives = 74/239 (30%), Gaps = 58/239 (24%)

Query: 8   LLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGG---SDLSKISEQLGKTVIDE 64
           LL   D+D T    ++A    + E++ + R    +    G       ++ +Q+G   + E
Sbjct: 5   LLI-SDLDNTWVGDQQA-LEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVG---LME 59

Query: 65  YDYVFSENG-LVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEF 123
            DY  +  G  + H +G     Q    +L     ++ +         L            
Sbjct: 60  PDYWLTAVGSEIYHPEG---LDQHWADYLSEHWQRDILQAIADGFEALKP---------- 106

Query: 124 RSGMLNISPIGRNCSQEERDE-------FERYDKIHNIRPKMVSVLREKFAHLNLTFSIG 176
                          Q   ++                +  ++  +L+E    + + FS  
Sbjct: 107 ---------------QSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFS-- 149

Query: 177 GQISFDVFPQGWDKTYCLRYL-DDFN----EIHFFGDKTYKGGNDHEIFESERTVGHTV 230
                D+ PQ  +K    +YL         +    GD     GND  +FE   T    V
Sbjct: 150 SGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGD----SGNDIGLFE---TSARGV 201

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 39/234 (16%), Positives = 69/234 (29%), Gaps = 44/234 (18%)

Query: 12  FDVDGTLTAPRKAA-TPQMLEFMRELR----KVV------TVGVVGGSDLSKISEQLGKT 60
           FD+DGTL +          +E +        K+          +      + +SE     
Sbjct: 7   FDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAII------NNLSELQD-- 58

Query: 61  VIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFT----LHYIA----DLD 112
             +  D   + NG       ++I     KS +  E++K    F     +  I     ++ 
Sbjct: 59  -RNLIDGYITMNGAYCFVGEEVI----YKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNIS 113

Query: 113 IPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLT 172
           +        +     L+++ I    S EE    E       I  +    +        + 
Sbjct: 114 VCQPNEMVKKIFYDFLHVNVI-PTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIG 172

Query: 173 FSIGGQISFDVFPQGWDKTYCLR----YLD-DFNEIHFFGDKTYKGGNDHEIFE 221
                    DV  +G  K   +     +      E   FGD    GGND  +  
Sbjct: 173 RW--YPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGD----GGNDISMLR 220

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 1e-04
 Identities = 36/239 (15%), Positives = 70/239 (29%), Gaps = 73/239 (30%)

Query: 21  PRKAATPQMLEFMRELRKVVTVGVVG--GSDLSKISEQLGKTVIDEYDYVFSENGLVAHK 78
            R     ++ + + ELR    V + G  GS         GKT             +    
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGS---------GKTW------------VAL-- 168

Query: 79  DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCS 138
                      S+    K++  ++F + ++                S    +  + +   
Sbjct: 169 -------DVCLSY----KVQCKMDFKIFWL----------NLKNCNSPETVLEMLQKLLY 207

Query: 139 QEERDEFERYDKIHNIRPKMVSV---LREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLR 195
           Q + +   R D   NI+ ++ S+   LR           +   +  +V     +     +
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL--LVLLNV----QNA----K 257

Query: 196 YLDDFNEIHFFGDKT-----YKGGNDHEIFESERTVGH-TVTSPEDTMEKCKAL-FLAK 247
             + FN       K      +K   D   F S  T  H ++     T+   +    L K
Sbjct: 258 AWNAFN----LSCKILLTTRFKQVTD---FLSAATTTHISLDHHSMTLTPDEVKSLLLK 309

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 32/211 (15%), Positives = 66/211 (31%), Gaps = 51/211 (24%)

Query: 49  DLSKISEQLGKTVI--DEYDYVFSENGLVAHKDGKLI------GTQSLKSFLGGEKLKEF 100
           D   + +   K+++  +E D++      V+    +L         + ++ F+  E L+  
Sbjct: 34  DCKDVQDMP-KSILSKEEIDHIIMSKDAVSGTL-RLFWTLLSKQEEMVQKFVE-EVLRIN 90

Query: 101 INFTLHYIA--DLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKM 158
             F +  I        +    +IE R  + N + +              + K +  R + 
Sbjct: 91  YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV--------------FAKYNVSRLQP 136

Query: 159 VSVLREKFAHLNLTFSIG--GQISFDVFPQGWDKTYCL--RYLDDFNEIHFFGDKTYKGG 214
              LR+    L    ++   G +       G  KT  +       +        K     
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVL-------GSGKT-WVALDVCLSYKVQCKMDFK----- 183

Query: 215 NDHEIFESERTVGHTVTSPEDTMEKCKALFL 245
               IF     + +   SPE  +E  + L  
Sbjct: 184 ----IFWL--NLKN-CNSPETVLEMLQKLLY 207

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 35/228 (15%)

Query: 12  FDVDGTLTAPRKAA-TPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGKTVIDEYD 66
            DVDGTL +      +   ++ ++++    + + +  G   SDL +I           YD
Sbjct: 17  LDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDA-------VPYD 69

Query: 67  YVFSENG-LVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS 125
            V + NG     +DG +I     K  +  +  ++ +     +   + + +  G F+   +
Sbjct: 70  GVIALNGAECVLRDGSVI----RKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLT 125

Query: 126 GMLNISPIGRNCSQEERDEFERYDKIHNI-------RPKMVSVLREKFAHLNLTFSIGGQ 178
             +               + E   +             +    +    + L+ T      
Sbjct: 126 PTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRW--HP 183

Query: 179 ISFDVFPQGWDKTYCLRYL-DDFN----EIHFFGDKTYKGGNDHEIFE 221
           +  DV   G  K   L    D +     EI   GD    GGND  + +
Sbjct: 184 LFADVNVAGTSKATGLSLFADYYRVKVSEIMACGD----GGNDIPMLK 227

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 58/230 (25%)

Query: 12  FDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGKTVIDEYDY 67
            DVDG LT   +  + + +E +R   K  +TV ++ G     +  +   LG         
Sbjct: 10  IDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN-----GP 64

Query: 68  VFSENG-LVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG 126
           VF ENG ++   DG       +K F   E   +F+       +   I             
Sbjct: 65  VFGENGGIMFDNDGS------IKKFFSNEGTNKFLEEMSKRTSMRSILT----------- 107

Query: 127 MLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFP 185
                           + +       +I P+ V  +R++      + F      S+ +  
Sbjct: 108 ----------------NRWREASTGFDIDPEDVDYVRKEAESRGFVIFY--SGYSWHLMN 149

Query: 186 QGWDKTYCLRYLDDF-----NEIHFFGDKTYKGGNDHEIFESERTVGHTV 230
           +G DK + +  L +      +EI   GD      ND  +F+         
Sbjct: 150 RGEDKAFAVNKLKEMYSLEYDEILVIGD----SNNDMPMFQ---LPVRKA 192

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 40/247 (16%), Positives = 76/247 (30%), Gaps = 49/247 (19%)

Query: 9   LALFDVDGTLTA----PRKA-ATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVID 63
           L   D DGTL      P ++ A   +L  + +L++     +V G    +IS  L   +  
Sbjct: 3   LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLDI-- 60

Query: 64  EYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEF 123
               +   +G  +  +G+++       FLG   + + I          D P   G  I  
Sbjct: 61  ---NMICYHGACSKINGQIVYNNGSDRFLG---VFDRIYEDTRSWVS-DFP---GLRIYR 110

Query: 124 RSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDV 183
           ++  +           + + +             + S + E      +    G  I  ++
Sbjct: 111 KNLAVLYHL--GLMGADMKPK-------------LRSRIEEIARIFGVETYYGKMI-IEL 154

Query: 184 FPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESER-----TVG-------HTVT 231
              G +K   +R +         GD       D   FE+        VG         V 
Sbjct: 155 RVPGVNKGSAIRSVRGERPAIIAGDDA----TDEAAFEANDDALTIKVGEGETHAKFHVA 210

Query: 232 SPEDTME 238
              +  +
Sbjct: 211 DYIEMRK 217

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 37/247 (14%), Positives = 66/247 (26%), Gaps = 45/247 (18%)

Query: 12  FDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGKTVIDEYDY 67
            D+DGTL              +R  +K   +V +  G     +      LG       D 
Sbjct: 10  LDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLG------VDG 63

Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTL------------HYIADLDIPI 115
             +  G      G+L+             +KE +                    +     
Sbjct: 64  YIAGGGNYIQYHGELL----YNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKE 119

Query: 116 KRGTFIEFRSGMLNISPIGRNCSQEERDEFERY--DKIHNI----RPKMVSVLREKF-AH 168
              T  + +     I+           +  E Y    IH I      K+   +++     
Sbjct: 120 IFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSNEKVFDEVKDILQDK 179

Query: 169 LNLTFSIGGQISFDVFPQGWDK----TYCLRYLD-DFNEIHFFGDKTYKGGNDHEIFESE 223
           + L         +++  + + K          L     E   FGD    G ND  +F+  
Sbjct: 180 MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGD----GQNDIVMFQ-- 233

Query: 224 RTVGHTV 230
                T+
Sbjct: 234 -ASDVTI 239

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	248
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	100.0
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	100.0
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	100.0
3dao_A	283	Putative phosphatse; structural genomics, joint ce	100.0
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	100.0
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	100.0
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	100.0
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	100.0
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	100.0
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	100.0
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	100.0
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	100.0
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	100.0
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	100.0
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	100.0
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	100.0
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	100.0
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.98
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	99.97
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.97
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.97
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.97
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.97
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.96
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.96
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.92
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.78
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.72
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.71
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.65
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.64
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.61
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.61
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.57
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.57
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.54
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.53
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.53
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.52
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.51
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.5
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.5
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.49
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.49
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.49
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.45
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.45
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.43
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.42
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.42
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.4
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.36
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.35
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.33
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.33
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.32
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.32
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.3
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.29
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.26
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.24
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.23
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.22
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.22
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.21
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.21
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.2
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.2
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	99.19
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.19
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.18
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.17
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.16
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.16
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.16
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.15
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.14
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.14
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.13
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.12
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.12
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.12
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.12
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.11
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.09
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.08
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.07
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.07
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.05
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	99.04
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.03
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.01
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.0
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.95
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.91
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	98.91
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.89
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	98.87
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	98.86
2hsz_A	243	Novel predicted phosphatase; structural genomics,	98.84
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.84
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.79
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	98.78
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.77
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.73
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	98.72
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.71
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	98.69
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.62
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	98.61
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.6
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.6
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	98.59
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.58
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.52
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.51
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.49
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.48
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.46
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.36
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.32
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.3
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.22
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.18
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.15
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	98.07
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.02
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.0
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.97
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	97.97
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.94
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	97.91
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.87
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	97.81
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	97.78
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	97.58
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.55
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.46
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.42
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	96.45
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.32
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	97.2
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	97.12
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	96.74
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	96.51
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	96.46
2zg6_A	220	Putative uncharacterized protein ST2620, probable	96.45
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	96.41
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	96.29
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	96.23
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	96.17
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	95.86
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	95.84
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	95.42
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	95.42
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	94.76
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	94.73
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	94.6
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	94.54
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	94.34
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	94.25
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	94.21
4gxt_A	385	A conserved functionally unknown protein; structur	93.78
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	92.96
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	92.89
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	92.77
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	91.76
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	91.45
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	88.42
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	88.16
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	88.08
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	85.27
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	84.86
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	84.71
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	83.35
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	80.53
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	80.24

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=100.00  E-value=4.7e-41  Score=278.58  Aligned_cols=241  Identities=54%  Similarity=0.977  Sum_probs=185.1

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      +++|+|+|||||||+++++.++++++++|++|+++ +.|++||||++..+.+.++..+...++++|+.||+.+++.++.+
T Consensus         2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~~~i   81 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNGLEI   81 (246)
T ss_dssp             CCSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETTEEE
T ss_pred             CCceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECCEEE
Confidence            36899999999999999999999999999999999 99999999999999888884211235799999999999999999


Q ss_pred             EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHH
Q 038498           84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLR  163 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  163 (248)
                      +...++..++.+.++++++.+.++.....++..++.|.+.+....++.+.........+..+..++......+.+.+.+.
T Consensus        82 ~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  161 (246)
T 3f9r_A           82 HRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELE  161 (246)
T ss_dssp             EECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHHHHH
Confidence            98876433568899999999888755544544566777655544444444333322222122222222223456677888


Q ss_pred             HHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhh
Q 038498          164 EKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKA  242 (248)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~  242 (248)
                      +.+++..+.+..+++.++||+|+++|||.||++|++ +++++||||.++++.||++||+.+|..+++|+||.+.+|.++.
T Consensus       162 ~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~  241 (246)
T 3f9r_A          162 NSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK  241 (246)
T ss_dssp             HHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred             hhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence            888764344344488999999999999999999997 8899999994444499999999986579999999999999998


Q ss_pred             hhc
Q 038498          243 LFL  245 (248)
Q Consensus       243 ~v~  245 (248)
                      .+.
T Consensus       242 ~~~  244 (246)
T 3f9r_A          242 IIA  244 (246)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            764

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=100.00  E-value=6.7e-41  Score=277.32  Aligned_cols=241  Identities=60%  Similarity=1.017  Sum_probs=168.4

Q ss_pred             cccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498            4 RKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      .+++|+|+|||||||+++++.++++++++|++|++++.|++||||++..+.+.++..+...++++|++||+.++++++.+
T Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~~~~i   82 (246)
T 2amy_A            3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLL   82 (246)
T ss_dssp             -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTEEE
T ss_pred             CCCceEEEEECCCCcCCCCcccCHHHHHHHHHHHhCCeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeCCcEE
Confidence            45789999999999999999999999999999976699999999999888888873111124689999999999988888


Q ss_pred             EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHH
Q 038498           84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLR  163 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  163 (248)
                      +...++..++.+.++++++.+.++.....+....+.|...........+............+..+.......+++.+.+.
T Consensus        83 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  162 (246)
T 2amy_A           83 CRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLR  162 (246)
T ss_dssp             EECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EeeecccccCHHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHHHHHHHHH
Confidence            88875322457889999988877532222222333444332221111111111111111111111111112334555676


Q ss_pred             HHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCc-eEEccCchhhHHHH
Q 038498          164 EKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTV-GHTVTSPEDTMEKC  240 (248)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~-~~av~Na~~~~k~~  240 (248)
                      +.++++.+.++.+++.++||+|+++|||.||++|..  ++++++|||++.|+.||++||+.+| . +++|+||++++|++
T Consensus       163 ~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~-~ag~av~Na~~~vk~~  241 (246)
T 2amy_A          163 KEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPR-TMGYSVTAPEDTRRIC  241 (246)
T ss_dssp             HHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTT-EEEEECSSHHHHHHHH
T ss_pred             HhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCC-cceEEeeCCCHHHHHH
Confidence            767653455544367899999999999999999943  8899999999999999999999998 7 99999999999999


Q ss_pred             hhhhc
Q 038498          241 KALFL  245 (248)
Q Consensus       241 A~~v~  245 (248)
                      |++|+
T Consensus       242 A~~v~  246 (246)
T 2amy_A          242 ELLFS  246 (246)
T ss_dssp             HHHCC
T ss_pred             HhhcC
Confidence            99984

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=100.00  E-value=1.1e-39  Score=272.74  Aligned_cols=243  Identities=56%  Similarity=1.006  Sum_probs=170.6

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcc--cccCCCceEEecCCcEEEeCCcE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK--TVIDEYDYVFSENGLVAHKDGKL   82 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~--~~~~~~~~~i~~nGa~i~~~~~~   82 (248)
                      .++|+|+|||||||+++++.++++++++|++|++++.|++||||++..+.+.++.  .+...++++|++||+.++++++.
T Consensus        11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~l~~~i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~NGa~i~~~~~~   90 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRL   90 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTEE
T ss_pred             cCeEEEEEeCccCCCCCCCcCCHHHHHHHHHHHhCCEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECCCcEEEeCCeE
Confidence            4689999999999999999999999999999975599999999999988887764  11112468999999999998888


Q ss_pred             EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHH
Q 038498           83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVL  162 (248)
Q Consensus        83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  162 (248)
                      ++...++..++.+.++++++.+.++.....+....+.|..............+.........+..+.......+.+.+.+
T Consensus        91 i~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  170 (262)
T 2fue_A           91 LSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEAL  170 (262)
T ss_dssp             CCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             EEEeeccccCCHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEEcCCHHHHHHHHHHH
Confidence            87776421235788899999887753332232233444433222111111111111111101111111111233445566


Q ss_pred             HHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHH
Q 038498          163 REKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC  240 (248)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~  240 (248)
                      .+.++++.+.++.++..++||+|+++|||.||++|..  ++++++|||++.|+.||++||+.+|..+++|+||++++|++
T Consensus       171 ~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~  250 (262)
T 2fue_A          171 KTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRC  250 (262)
T ss_dssp             HHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHH
T ss_pred             HHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHh
Confidence            6777654465554467789999999999999999933  88999999988888999999999983499999999999999


Q ss_pred             hhhhccC
Q 038498          241 KALFLAK  247 (248)
Q Consensus       241 A~~v~~~  247 (248)
                      |++|+++
T Consensus       251 a~~v~~~  257 (262)
T 2fue_A          251 REIFFPE  257 (262)
T ss_dssp             HHHHCTT
T ss_pred             hheeCCC
Confidence            9999864

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=100.00  E-value=1.1e-36  Score=257.02  Aligned_cols=231  Identities=16%  Similarity=0.207  Sum_probs=164.2

Q ss_pred             cccceEEEEecCCCCCCCCC-CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCc
Q 038498            4 RKQGLLALFDVDGTLTAPRK-AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGK   81 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~-~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~   81 (248)
                      ++++|+|+|||||||+++++ .++++++++|++++++ +.|+++|||++..+.+.+.. + ....++|+.||+.+++.++
T Consensus        18 ~~~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~-l-~~~~~~I~~NGa~i~~~~~   95 (283)
T 3dao_A           18 QGMIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAP-I-KHKLLYITDGGTVVRTPKE   95 (283)
T ss_dssp             -CCCCEEEECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGG-G-GGGCEEEETTTTEEECSSC
T ss_pred             ccCceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-c-CCCcEEEECCCcEEEECCE
Confidence            47899999999999999988 8999999999999999 99999999999988877665 2 2224899999999999889


Q ss_pred             EEEEeecccccchHHHHHHHHHHHHhhcccc--ccccccccceeccc-cc----e-ecccCCCCC-hhh-h-hhhhhccc
Q 038498           82 LIGTQSLKSFLGGEKLKEFINFTLHYIADLD--IPIKRGTFIEFRSG-ML----N-ISPIGRNCS-QEE-R-DEFERYDK  150 (248)
Q Consensus        82 ~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~----~-~~~~~~~~~-~~~-~-~~~~~~~~  150 (248)
                      .++...+    +.+.++++++.+.++.....  +....+.|...... ..    . +........ ... . .....+..
T Consensus        96 ~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i  171 (283)
T 3dao_A           96 ILKTYPM----DEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTV  171 (283)
T ss_dssp             EEEECCC----CHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEE
T ss_pred             EEEEecC----CHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEE
Confidence            9988876    47889999998887621211  11122222211000 00    0 000000000 000 0 00000100


Q ss_pred             c--ccchHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhh
Q 038498          151 I--HNIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFES  222 (248)
Q Consensus       151 ~--~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~  222 (248)
                      .  ....+.+.+.+.+.++ .+.+..+  ++.++|++|+++||+.||+++++     ++++++|||    +.||++||+.
T Consensus       172 ~~~~~~~~~~~~~l~~~~~~~~~~~~s--~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD----~~NDi~ml~~  245 (283)
T 3dao_A          172 FHPDKCEELCTPVFIPAWNKKAHLAAA--GKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGD----NLNDIEMLQN  245 (283)
T ss_dssp             ECSSCHHHHHTTTHHHHHTTTEEEEEE--TTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEEC----SGGGHHHHHH
T ss_pred             EcChHHHHHHHHHHHHHhcCCEEEEEe--cCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECC----CHHHHHHHHh
Confidence            1  1223334455666665 3445444  68899999999999999999997     789999999    9999999999


Q ss_pred             CCCceEEccCchhhHHHHhhhhccC
Q 038498          223 ERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       223 ~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +| .++||+||.+++|++|++|+++
T Consensus       246 ag-~~vam~na~~~~k~~A~~v~~s  269 (283)
T 3dao_A          246 AG-ISYAVSNARQEVIAAAKHTCAP  269 (283)
T ss_dssp             SS-EEEEETTSCHHHHHHSSEEECC
T ss_pred             CC-CEEEcCCCCHHHHHhcCeECCC
Confidence            99 9999999999999999999865

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=100.00  E-value=2.4e-36  Score=252.31  Aligned_cols=233  Identities=17%  Similarity=0.282  Sum_probs=162.0

Q ss_pred             CcccccceEEEEecCCCCCC-CCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEE-E
Q 038498            1 MAARKQGLLALFDVDGTLTA-PRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVA-H   77 (248)
Q Consensus         1 ~~~~~~~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i-~   77 (248)
                      |+..+.+|+|+|||||||++ +.+.++++++++|++++++ +.++++|||++..+ +.+..   ..++++|+.||+.+ +
T Consensus         6 ~~~~~miKli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~-~~~~~---l~~~~~i~~nGa~i~~   81 (268)
T 3r4c_A            6 PRGSHMIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDL-HEIDA---VPYDGVIALNGAECVL   81 (268)
T ss_dssp             CTTCSCCCEEEECSBTTTBCTTTCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCC-GGGTT---SCCCEEEEGGGTEEEE
T ss_pred             cCCCCceEEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHh-HHHHh---cCCCcEEEeCCcEEEE
Confidence            44456799999999999999 5678999999999999999 99999999998766 44443   23468899999999 8


Q ss_pred             eCCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccc-ccee-cccCCCCCh-hhhh-hhhh--cccc
Q 038498           78 KDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG-MLNI-SPIGRNCSQ-EERD-EFER--YDKI  151 (248)
Q Consensus        78 ~~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~-~~~~-~~~~--~~~~  151 (248)
                      +.++.++...+    +.+.+.++++.++++.....+....+.|...... .... ......... .... ....  +-++
T Consensus        82 ~~~~~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (268)
T 3r4c_A           82 RDGSVIRKVAI----PAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQL  157 (268)
T ss_dssp             TTSCEEEECCC----CHHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCE
T ss_pred             cCCeEEEEecC----CHHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEE
Confidence            87788888876    4788899999887753222111112222211000 0000 000000000 0000 0000  0010


Q ss_pred             c-cchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCC
Q 038498          152 H-NIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERT  225 (248)
Q Consensus       152 ~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~  225 (248)
                      . .........+.+.++++.+..+  ++.++|++|++++|+.|++++++     ++++++|||    +.||++|++.+| 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD----~~NDi~m~~~ag-  230 (268)
T 3r4c_A          158 CFYFDEEAEQKVMPLLSGLSATRW--HPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGD----GGNDIPMLKAAG-  230 (268)
T ss_dssp             EEECCHHHHHHHGGGCTTEEEEEE--ETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEEC----SGGGHHHHHHSS-
T ss_pred             EEecChHHHHHHHHhCCCcEEEEe--cCCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECC----cHHhHHHHHhCC-
Confidence            0 0112233455566776555544  57899999999999999999997     789999999    999999999999 


Q ss_pred             ceEEccCchhhHHHHhhhhccCC
Q 038498          226 VGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       226 ~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .++||+||++++|++|++|++++
T Consensus       231 ~~vam~na~~~~k~~Ad~v~~~~  253 (268)
T 3r4c_A          231 IGVAMGNASEKVQSVADFVTDTV  253 (268)
T ss_dssp             EEEECTTSCHHHHHTCSEECCCT
T ss_pred             CeEEeCCCcHHHHHhcCEeeCCC
Confidence            99999999999999999999753

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=100.00  E-value=5.4e-36  Score=252.89  Aligned_cols=231  Identities=15%  Similarity=0.217  Sum_probs=153.2

Q ss_pred             ccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CC
Q 038498            3 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DG   80 (248)
Q Consensus         3 ~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~   80 (248)
                      .++++|+|+|||||||+++++.++++++++|++++++ +.|+++|||++..+.+.+.. + ....++|+.||+.+++ ++
T Consensus        17 ~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~-l-~~~~~~I~~nGa~i~~~~~   94 (285)
T 3pgv_A           17 FQGMYQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDN-L-GIRSYMITSNGARVHDSDG   94 (285)
T ss_dssp             ----CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHH-H-CSCCEEEEGGGTEEECTTS
T ss_pred             ccCcceEEEEeCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-c-CCCccEEEcCCeEEECCCC
Confidence            4578999999999999999999999999999999999 99999999999876655543 1 1125899999999996 78


Q ss_pred             cEEEEeecccccchHHHHHHHHHHHHh-hccccccccccccceecc-ccceec-----c-cCCCCChhhhhhhhh---cc
Q 038498           81 KLIGTQSLKSFLGGEKLKEFINFTLHY-IADLDIPIKRGTFIEFRS-GMLNIS-----P-IGRNCSQEERDEFER---YD  149 (248)
Q Consensus        81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~-----~-~~~~~~~~~~~~~~~---~~  149 (248)
                      +.++...+    +.+.++++++.+... .....+....+.|..... ....+.     + ............+..   ..
T Consensus        95 ~~l~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~  170 (285)
T 3pgv_A           95 QQIFAHNL----DRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTC  170 (285)
T ss_dssp             CEEEECCC----CHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEEC
T ss_pred             CEEEecCC----CHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeC
Confidence            88888876    467777777633221 111001111111211100 000000     0 000000000000000   00


Q ss_pred             ccccchHHHHHHHHHHcCC-ceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          150 KIHNIRPKMVSVLREKFAH-LNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       150 ~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      ...+..+.+...+.+.++. +.+.++  +..++|++|++++|+.||++|++     ++++++|||    +.||++||+.+
T Consensus       171 ~~~~~~~~~~~~l~~~~~~~~~~~~s--~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD----~~NDi~ml~~a  244 (285)
T 3pgv_A          171 EDHEHLLPLEQAMNARWGDRVNVSFS--TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGD----GMNDAEMLSMA  244 (285)
T ss_dssp             SCHHHHHHHHHHHHHHHGGGEEEEES--STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEEC----SGGGHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHhcCCEEEEEe--CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECC----cHhhHHHHHhc
Confidence            0011233445566666643 344444  67899999999999999999997     789999999    99999999999


Q ss_pred             CCceEEccCchhhHHHHhhh--hcc
Q 038498          224 RTVGHTVTSPEDTMEKCKAL--FLA  246 (248)
Q Consensus       224 g~~~~av~Na~~~~k~~A~~--v~~  246 (248)
                      | .++||+||++++|++|++  |++
T Consensus       245 g-~~vAm~Na~~~vk~~A~~~~v~~  268 (285)
T 3pgv_A          245 G-KGCIMANAHQRLKDLHPELEVIG  268 (285)
T ss_dssp             S-EEEECTTSCHHHHHHCTTSEECC
T ss_pred             C-CEEEccCCCHHHHHhCCCCEecc
Confidence            9 999999999999999985  554

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=100.00  E-value=3.2e-35  Score=244.42  Aligned_cols=226  Identities=17%  Similarity=0.209  Sum_probs=158.1

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIG   84 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~   84 (248)
                      ++|+|+|||||||+++.+.++++++++|++++++ +.++++|||++..+.+.+.. +  .++.+|+.||+.++..++.++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~-l--~~~~~i~~nGa~i~~~~~~i~   78 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQ-L--GIDSFVSFNGQYVVFEGNVLY   78 (258)
T ss_dssp             CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHH-H--TCCCEEEGGGTEEEETTEEEE
T ss_pred             CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHh-c--CCCEEEECCCCEEEECCEEEE
Confidence            4799999999999999889999999999999999 99999999999876554443 1  123578999999999888888


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccceecc-c-cc-eecccCCC---CChhh--hhhhhhccccccchH
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-G-ML-NISPIGRN---CSQEE--RDEFERYDKIHNIRP  156 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~  156 (248)
                      ...+    +.+.++++++.+.++.....+....+.|..... . .. .+......   .....  ...+..+- +.. .+
T Consensus        79 ~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~~~-~~  152 (258)
T 2pq0_A           79 KQPL----RREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQAL-LFC-RA  152 (258)
T ss_dssp             ECCC----CHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEE-ECS-CH
T ss_pred             EecC----CHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEE-EEC-CH
Confidence            8876    478899999988875322211111111211000 0 00 00000000   00000  00000000 011 11


Q ss_pred             HHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          157 KMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      .....+.+.++++.+..+  ++.++|++|+++||+.|++++++     ++++++|||    +.||++||+.+| +++||+
T Consensus       153 ~~~~~~~~~~~~~~~~~~--~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD----s~NDi~ml~~ag-~~vam~  225 (258)
T 2pq0_A          153 EEEEPYVRNYPEFRFVRW--HDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGD----GLNDIEMLSFVG-TGVAMG  225 (258)
T ss_dssp             HHHHHHHHHCTTEEEEEE--ETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECC----SGGGHHHHHHSS-EEEEET
T ss_pred             HHHHHHHHhCCCeEEEEe--CCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECC----cHHhHHHHHhCC-cEEEeC
Confidence            222345556677655555  56799999999999999999997     789999999    999999999999 999999


Q ss_pred             CchhhHHHHhhhhccC
Q 038498          232 SPEDTMEKCKALFLAK  247 (248)
Q Consensus       232 Na~~~~k~~A~~v~~~  247 (248)
                      ||.+++|+.|++|+++
T Consensus       226 na~~~~k~~A~~v~~~  241 (258)
T 2pq0_A          226 NAHEEVKRVADFVTKP  241 (258)
T ss_dssp             TCCHHHHHTCSEEECC
T ss_pred             CCcHHHHHhCCEEeCC
Confidence            9999999999999864

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=100.00  E-value=1.7e-35  Score=249.92  Aligned_cols=229  Identities=11%  Similarity=0.152  Sum_probs=160.7

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCc-eEEecCCcEEEe-CCc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYD-YVFSENGLVAHK-DGK   81 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~-~~i~~nGa~i~~-~~~   81 (248)
                      +++|+|+|||||||+++.+.++++++++|++++++ +.++++|||++..+...+.. +  .++ ++|+.||+.+++ .++
T Consensus         4 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-~--~~~~~~i~~nGa~i~~~~~~   80 (290)
T 3dnp_A            4 MSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKS-L--KLDAKLITHSGAYIAEKIDA   80 (290)
T ss_dssp             --CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-T--TCCSCEEEGGGTEEESSTTS
T ss_pred             CcceEEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-c--CCCCeEEEcCCeEEEcCCCC
Confidence            56899999999999999999999999999999999 99999999999877655543 1  123 899999999996 678


Q ss_pred             EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccc------eecc---cCC-CCChhhhhhhh-----
Q 038498           82 LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML------NISP---IGR-NCSQEERDEFE-----  146 (248)
Q Consensus        82 ~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~-~~~~~~~~~~~-----  146 (248)
                      .++...+    +.+.+.++++.+.++.....+....+.|........      .+.+   ... ........++.     
T Consensus        81 ~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (290)
T 3dnp_A           81 PFFEKRI----SDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPV  156 (290)
T ss_dssp             CSEECCC----CHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCC
T ss_pred             EEEecCC----CHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCC
Confidence            8888776    478889999988875332222111222221100000      0000   000 00000000000     


Q ss_pred             ---hc--cccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCC
Q 038498          147 ---RY--DKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGND  216 (248)
Q Consensus       147 ---~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~ND  216 (248)
                         .+  ....+..+.+...+....+++.+..+  +..++|++|++++|+.|++++++     ++++++|||    +.||
T Consensus       157 ~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~s--~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD----~~ND  230 (290)
T 3dnp_A          157 SAPVIEVYTEHDIQHDITETITKAFPAVDVIRV--NDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGH----QYDD  230 (290)
T ss_dssp             CCSEEEEECCGGGHHHHHHHHHHHCTTEEEEEE--ETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEEC----SGGG
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhCCcEEEEEe--CCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECC----chhh
Confidence               00  00112233444555445577656555  57899999999999999999997     789999999    9999


Q ss_pred             HHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          217 HEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       217 i~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ++|++.+| +++||+||++++|++|++|+.+
T Consensus       231 i~m~~~ag-~~vam~na~~~~k~~Ad~v~~s  260 (290)
T 3dnp_A          231 LPMIELAG-LGVAMGNAVPEIKRKADWVTRS  260 (290)
T ss_dssp             HHHHHHSS-EEEECTTSCHHHHHHSSEECCC
T ss_pred             HHHHHhcC-CEEEecCCcHHHHHhcCEECCC
Confidence            99999999 9999999999999999999865

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=100.00  E-value=5.8e-35  Score=248.81  Aligned_cols=230  Identities=16%  Similarity=0.199  Sum_probs=163.9

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHH-HHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQ-MLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKL   82 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~-~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~   82 (248)
                      +++|+|+|||||||+++.+.++++ +.++|++++++ +.++++|||++..+.+.+.. + ....++|+.||+.++..++.
T Consensus        35 M~iKli~fDlDGTLld~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l-~~~~~~i~~nGa~i~~~~~~  112 (304)
T 3l7y_A           35 MSVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPD-C-HEQLTFVGENGANIISKNQS  112 (304)
T ss_dssp             -CCSEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTT-T-GGGSEEEEGGGTEEEETTEE
T ss_pred             eeeEEEEEeCCCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-h-CCCCcEEeCCCcEEEECCEE
Confidence            468999999999999999999999 89999999999 99999999999988776664 2 22358999999999889999


Q ss_pred             EEEeecccccchHHHHHHHHHHHHhhccccc--cccccccceec-cc-----cceecccCC---CCChhhhhhhhhcc--
Q 038498           83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDI--PIKRGTFIEFR-SG-----MLNISPIGR---NCSQEERDEFERYD--  149 (248)
Q Consensus        83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~-~~-----~~~~~~~~~---~~~~~~~~~~~~~~--  149 (248)
                      ++...+    +.+.++++++.+.+++....+  ....+.|.... ..     ...+.+...   .........+..+-  
T Consensus       113 i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~~  188 (304)
T 3l7y_A          113 LIEVFQ----QREDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQ  188 (304)
T ss_dssp             EEECCC----CHHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEEE
T ss_pred             EEEecC----CHHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEEE
Confidence            988876    478899999988874212111  11122222110 00     000000000   00000000000000  


Q ss_pred             ccccchHHHHHHHHHHcCC--ceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhh
Q 038498          150 KIHNIRPKMVSVLREKFAH--LNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFES  222 (248)
Q Consensus       150 ~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~  222 (248)
                      ......+.+.+.+.+.+++  +.+..+  +..++|++|++++|+.||+++++     ++++++|||    +.||++|++.
T Consensus       189 ~~~~~~~~~~~~l~~~~~~~~~~~~~s--~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GD----s~NDi~m~~~  262 (304)
T 3l7y_A          189 VKEEESAQIMKAIADYKTSQRLVGTAS--GFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGD----GGNDIEMLKL  262 (304)
T ss_dssp             CCGGGHHHHHHHHHTSTTTTTEEEEEC--STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEEC----SGGGHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhcCCCeEEEEEc--CCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECC----CHHHHHHHHh
Confidence            0112334556667666765  444444  68899999999999999999997     789999999    9999999999


Q ss_pred             CCCceEEccCchhhHHHHhhhhccC
Q 038498          223 ERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       223 ~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +| .++||+||++++|++|++|+++
T Consensus       263 ag-~~vam~na~~~~k~~Ad~v~~~  286 (304)
T 3l7y_A          263 AK-YSYAMANAPKNVKAAANYQAKS  286 (304)
T ss_dssp             CT-EEEECTTSCHHHHHHCSEECCC
T ss_pred             cC-CeEEcCCcCHHHHHhccEEcCC
Confidence            99 9999999999999999999864

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=100.00  E-value=2.1e-35  Score=247.99  Aligned_cols=232  Identities=16%  Similarity=0.146  Sum_probs=161.9

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe--CC
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--DG   80 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--~~   80 (248)
                      +++|+|+|||||||+++.+.++++++++|++++++ +.++++|||++..+.+.+... +.....++|+.||+.+++  ++
T Consensus         3 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~   82 (279)
T 4dw8_A            3 LKYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESK   82 (279)
T ss_dssp             -CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTC
T ss_pred             CcceEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCC
Confidence            45899999999999999999999999999999999 999999999998776655541 111135899999999996  77


Q ss_pred             cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccc-cc------eeccc-C-CCCChhhhhhhhhccc-
Q 038498           81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG-ML------NISPI-G-RNCSQEERDEFERYDK-  150 (248)
Q Consensus        81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~-~-~~~~~~~~~~~~~~~~-  150 (248)
                      +.++...+    +.+.+.++++.+.++.....+......|...... ..      ...+. . ..........+..+-. 
T Consensus        83 ~~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~  158 (279)
T 4dw8_A           83 EMMYENVL----PNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIV  158 (279)
T ss_dssp             CEEEECCC----CGGGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEE
T ss_pred             eEEEEecC----CHHHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEe
Confidence            88888876    4678888999888763222111111112110000 00      00000 0 0000000000000000 


Q ss_pred             -cccchHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          151 -IHNIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       151 -~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                       .....+.+.+.+.+.++ .+.+..+  ++.++|++|++++|+.|++++++     ++++++|||    +.||++|++.+
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~~~~~~s--~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD----~~NDi~m~~~a  232 (279)
T 4dw8_A          159 GDAGKLIPVESELCIRLQGKINVFRS--EPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGD----GYNDLSMIKFA  232 (279)
T ss_dssp             SCHHHHHHHHHHHHHHTTTTCEEEEE--ETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHhcCCEEEEEc--CCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECC----ChhhHHHHHHc
Confidence             01123345556666664 4556555  57899999999999999999997     789999999    99999999999


Q ss_pred             CCceEEccCchhhHHHHhhhhccC
Q 038498          224 RTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       224 g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      | .++||+||++++|++|++|+++
T Consensus       233 g-~~vam~na~~~~k~~A~~v~~~  255 (279)
T 4dw8_A          233 G-MGVAMGNAQEPVKKAADYITLT  255 (279)
T ss_dssp             S-EEEECTTSCHHHHHHCSEECCC
T ss_pred             C-cEEEcCCCcHHHHHhCCEEcCC
Confidence            9 9999999999999999999865

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=100.00  E-value=8.3e-35  Score=244.32  Aligned_cols=232  Identities=15%  Similarity=0.193  Sum_probs=138.7

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe--CC
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--DG   80 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--~~   80 (248)
                      +++|+|+|||||||+++.+.++++++++|++++++ +.++++|||++..+.+.+... +....+++|+.||+ +++  ++
T Consensus         3 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~~~~~   81 (279)
T 3mpo_A            3 LTIKLIAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQTISG   81 (279)
T ss_dssp             --CCEEEECC-----------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEEETTS
T ss_pred             cceEEEEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEECCCC
Confidence            46899999999999999999999999999999999 999999999998776655441 11223589999999 664  67


Q ss_pred             cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccc-------eecccCCCCChhh--hhhhhhccc
Q 038498           81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GML-------NISPIGRNCSQEE--RDEFERYDK  150 (248)
Q Consensus        81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~--~~~~~~~~~  150 (248)
                      +.++...+    +.+.++++++.+.++.....+....+.|..... ...       ...+.........  ...+..+-.
T Consensus        82 ~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~  157 (279)
T 3mpo_A           82 KVLTNHSL----TYEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMF  157 (279)
T ss_dssp             CEEEECCC----CHHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEE
T ss_pred             CEEEecCC----CHHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEE
Confidence            88888776    478899999988886333222222222221110 000       0000000000000  000000000


Q ss_pred             c--ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          151 I--HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       151 ~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      .  ....+.+.+.+.+.+++ .+....+++.++|+.|+++||+.|++++++     ++++++|||    +.||++|++.+
T Consensus       158 ~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD----~~NDi~m~~~a  232 (279)
T 3mpo_A          158 VDYPQVIEQVKANMPQDFKD-RFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGD----QGNDLTMIKYA  232 (279)
T ss_dssp             ECCHHHHHHHHHHCCHHHHH-HEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC------CCTTHHHHHHS
T ss_pred             cCCHHHHHHHHHHHHHHhCC-CEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECC----chhhHHHHHhc
Confidence            0  01111222223222221 133333378899999999999999999997     789999999    99999999999


Q ss_pred             CCceEEccCchhhHHHHhhhhccC
Q 038498          224 RTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       224 g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      | .++||+||++++|++|++|+.+
T Consensus       233 g-~~vam~na~~~~k~~A~~v~~~  255 (279)
T 3mpo_A          233 G-LGVAMGNAIDEVKEAAQAVTLT  255 (279)
T ss_dssp             T-EECBC---CCHHHHHCSCBC--
T ss_pred             C-ceeeccCCCHHHHHhcceeccC
Confidence            9 9999999999999999999864

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=100.00  E-value=1.4e-34  Score=241.93  Aligned_cols=230  Identities=17%  Similarity=0.248  Sum_probs=159.4

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIG   84 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~   84 (248)
                      .+|+|+|||||||+++.+.+++++.++|++++++ +.++++|||++..+.+.+..   ..++++|+.||+.++.+++.++
T Consensus         4 M~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~---~~~~~~i~~nGa~i~~~~~~~~   80 (274)
T 3fzq_A            4 LYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLS---LGVDGYIAGGGNYIQYHGELLY   80 (274)
T ss_dssp             CCCEEEECSBTTTBBTTTBCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHT---TCCSEEEETTTTEEEETTEEEE
T ss_pred             cceEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH---cCCCEEEecCccEEEECCEEEE
Confidence            4799999999999999999999999999999999 99999999999876655543   1245789999999999899998


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccc-e------------ecccCCC-CChhhhhhhh--h
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GML-N------------ISPIGRN-CSQEERDEFE--R  147 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~------------~~~~~~~-~~~~~~~~~~--~  147 (248)
                      ...+    +.+.+.++++.+.++.....+....+.|..... ... .            ....... ........+.  .
T Consensus        81 ~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (274)
T 3fzq_A           81 NQSF----NQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQD  156 (274)
T ss_dssp             ECCC----CHHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCC
T ss_pred             EcCC----CHHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccC
Confidence            8876    478889999988886333222111222211000 000 0            0000000 0000000000  0


Q ss_pred             ccccc-cchHHHHHHHHHHcCC-ceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHH
Q 038498          148 YDKIH-NIRPKMVSVLREKFAH-LNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIF  220 (248)
Q Consensus       148 ~~~~~-~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~  220 (248)
                      +.++. .........+.+.++. +.+..+..+..++|++|++++|+.|++++++     ++++++|||    +.||++|+
T Consensus       157 ~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD----~~NDi~m~  232 (274)
T 3fzq_A          157 IHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGD----GQNDIVMF  232 (274)
T ss_dssp             CCEEEEECCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECC----SGGGHHHH
T ss_pred             eEEEEEEcCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECC----ChhHHHHH
Confidence            00000 0122334455555543 3344442122899999999999999999997     789999999    99999999


Q ss_pred             hhCCCceEEccCchhhHHHHhhhhccC
Q 038498          221 ESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       221 ~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +.+| .++||+||++++|+.|++|+++
T Consensus       233 ~~ag-~~vam~na~~~~k~~A~~v~~~  258 (274)
T 3fzq_A          233 QASD-VTIAMKNSHQQLKDIATSICED  258 (274)
T ss_dssp             HTCS-EEEEETTSCHHHHHHCSEEECC
T ss_pred             HhcC-ceEEecCccHHHHHhhhheeCC
Confidence            9999 9999999999999999999865

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=100.00  E-value=7.8e-34  Score=241.78  Aligned_cols=228  Identities=16%  Similarity=0.168  Sum_probs=160.7

Q ss_pred             cceEEEEecCCCCCCC-CCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHh--ccccc---CCCceEEecCCcEEEe
Q 038498            6 QGLLALFDVDGTLTAP-RKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQL--GKTVI---DEYDYVFSENGLVAHK   78 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~-~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l--~~~~~---~~~~~~i~~nGa~i~~   78 (248)
                      ++|+|+|||||||+++ ++.++++++++|++|+++ +.|+++|||++..+.+.+  .. +.   ....++|++||+.+++
T Consensus        26 ~ikli~~DlDGTLl~~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~-l~~~~~~~~~~I~~NGa~i~~  104 (301)
T 2b30_A           26 DIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEEN-LKKMNFYGMPGVYINGTIVYD  104 (301)
T ss_dssp             CCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHH-HHHHTCCSCSEEEGGGTEEEC
T ss_pred             cccEEEEECCCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHh-hcccccCCCeEEEcCCeEEEe
Confidence            4799999999999999 899999999999999999 999999999998776666  33 11   1113799999999998


Q ss_pred             -CCcEEEEeecccccchHHHHHHHHHHHHhhc-ccccc-ccccccceecccccee---c-ccCCCCChhhhhhhh---hc
Q 038498           79 -DGKLIGTQSLKSFLGGEKLKEFINFTLHYIA-DLDIP-IKRGTFIEFRSGMLNI---S-PIGRNCSQEERDEFE---RY  148 (248)
Q Consensus        79 -~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~---~~  148 (248)
                       +++.++...+    +.+.++++++.+.+... ...+. ...+.|.........+   . .......... ..+.   .+
T Consensus       105 ~~~~~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i  179 (301)
T 2b30_A          105 QIGYTLLDETI----ETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH-NEMLKYRTM  179 (301)
T ss_dssp             TTCCEEEECCC----CHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH-HHHTTCCCC
T ss_pred             CCCCEEEEccC----CHHHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecc-hhhhccCCc
Confidence             8899988877    47889999998887532 21111 1112222111000000   0 0000000000 0000   00


Q ss_pred             cc-----cccchHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCH
Q 038498          149 DK-----IHNIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDH  217 (248)
Q Consensus       149 ~~-----~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi  217 (248)
                      .+     .....+.+.+.+.+.++ ++.+..+  +..++||+|++++|+.|++.+++     ++++++|||    +.||+
T Consensus       180 ~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s--~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD----~~nD~  253 (301)
T 2b30_A          180 NKLMIVLDPSESKTVIGNLKQKFKNKLTIFTT--YNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGD----AENDI  253 (301)
T ss_dssp             SEEEECCCTTTHHHHHHHHHHHSTTTEEEEEC--TTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEEC----SGGGH
T ss_pred             eEEEEECCHHHHHHHHHHHHHHhcCCEEEEEe--CCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECC----CHHHH
Confidence            00     01223455566666664 4444444  67899999999999999999996     779999999    99999


Q ss_pred             HHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          218 EIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       218 ~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      +||+.+| .+++|+||.+++|+.|++|+.
T Consensus       254 ~m~~~ag-~~va~~na~~~~k~~a~~v~~  281 (301)
T 2b30_A          254 AMLSNFK-YSFAVANATDSAKSHAKCVLP  281 (301)
T ss_dssp             HHHHSCS-EEEECTTCCHHHHHHSSEECS
T ss_pred             HHHHHcC-CeEEEcCCcHHHHhhCCEEEc
Confidence            9999999 999999999999999999986

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=100.00  E-value=1.1e-33  Score=237.08  Aligned_cols=229  Identities=16%  Similarity=0.162  Sum_probs=161.2

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHH-HHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQM-LEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~-~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      ++|+|+|||||||+++++.+++++ +++|++|+++ +.|++||||++..+.+.+.. + ...+++|++||+.++++++.+
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l-~~~~~~I~~NGa~i~~~~~~i   79 (271)
T 1rlm_A            2 AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPE-L-KDEISFVAENGALVYEHGKQL   79 (271)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTT-T-TTTSEEEEGGGTEEEETTEEE
T ss_pred             CccEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHh-c-CCCCEEEECCccEEEECCeEE
Confidence            579999999999999999999995 9999999999 99999999999888776654 1 223589999999999988888


Q ss_pred             EEeecccccchHHHHHHHHHHHHhhcc-ccccccccccceeccc------cceecccCCCCC-hhh-hhhhhhcccc--c
Q 038498           84 GTQSLKSFLGGEKLKEFINFTLHYIAD-LDIPIKRGTFIEFRSG------MLNISPIGRNCS-QEE-RDEFERYDKI--H  152 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~-~~~~~~~~~~--~  152 (248)
                      +...+    +.+.++++++.+.+++.. ..+....+.|......      ...+.+...... ... ......+...  .
T Consensus        80 ~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~~~  155 (271)
T 1rlm_A           80 FHGEL----TRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPD  155 (271)
T ss_dssp             EECCC----CHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCG
T ss_pred             EEecC----CHHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEcCH
Confidence            87766    578899999988875211 1111112222211000      000000000000 000 0000001000  1


Q ss_pred             cchHHHHHHHHHHcCC-ceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCc
Q 038498          153 NIRPKMVSVLREKFAH-LNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTV  226 (248)
Q Consensus       153 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~  226 (248)
                      ...+.+.+.+.+.++. +.+..+  +..++|++|++++|+.+++++++     ++++++|||    +.||++|++.+| .
T Consensus       156 ~~~~~~~~~l~~~~~~~~~~~~s--~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD----~~nD~~m~~~ag-~  228 (271)
T 1rlm_A          156 EQIPLVIDKLHVALDGIMKPVTS--GFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGD----SGNDAEMLKMAR-Y  228 (271)
T ss_dssp             GGHHHHHHHHHHHTTTSSEEEEC--STTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHCS-E
T ss_pred             HHHHHHHHHHHHHcCCcEEEEec--cCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECC----cHHHHHHHHHcC-C
Confidence            1233445556666653 555544  67899999999999999999997     789999999    999999999999 9


Q ss_pred             eEEccCchhhHHHHhhhhccC
Q 038498          227 GHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       227 ~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +++|+||.+++|+.|++|+.+
T Consensus       229 ~va~~na~~~~k~~a~~v~~~  249 (271)
T 1rlm_A          229 SFAMGNAAENIKQIARYATDD  249 (271)
T ss_dssp             EEECTTCCHHHHHHCSEECCC
T ss_pred             eEEeCCccHHHHHhCCeeCcC
Confidence            999999999999999999865

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=100.00  E-value=7.9e-34  Score=239.47  Aligned_cols=232  Identities=17%  Similarity=0.224  Sum_probs=156.8

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe--CCc
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--DGK   81 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--~~~   81 (248)
                      .+|+|+|||||||+++++.++++++++|++++++ +.|+++|||++..+.+.+... +....+++|++||+.+++  +++
T Consensus         4 m~kli~~DlDGTLl~~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~   83 (282)
T 1rkq_A            4 AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGS   83 (282)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCC
T ss_pred             cceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCe
Confidence            4799999999999999999999999999999999 999999999998766555431 111124799999999998  788


Q ss_pred             EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceecc--ccceecccCCCCCh--hhhhhhh---hcccc---
Q 038498           82 LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS--GMLNISPIGRNCSQ--EERDEFE---RYDKI---  151 (248)
Q Consensus        82 ~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~---~~~~~---  151 (248)
                      .++...+    +.+.++++++.+.++.....+....+.|.....  ..............  .....+.   .+.++   
T Consensus        84 ~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~  159 (282)
T 1rkq_A           84 TVAQTAL----SYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMI  159 (282)
T ss_dssp             EEEECCB----CHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEE
T ss_pred             EEEEecC----CHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEE
Confidence            8888876    578899999988875222111111122221100  00000000000000  0000000   00000   


Q ss_pred             c--cchHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          152 H--NIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       152 ~--~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      .  +..+.+.+.+.+.++ ++.+..+  ++.++||+|++++|+.+++++++     ++++++|||    +.||++|++.+
T Consensus       160 ~~~~~~~~~~~~l~~~~~~~~~~~~s--~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD----~~nD~~m~~~a  233 (282)
T 1rkq_A          160 DEPAILDQAIARIPQEVKEKYTVLKS--APYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGD----QENDIAMIEYA  233 (282)
T ss_dssp             CCHHHHHHHHHHSCHHHHHHEEEEEE--ETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHhcCCEEEEEe--CCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECC----cHHHHHHHHHC
Confidence            0  111222223322332 3444444  56799999999999999999996     779999999    99999999999


Q ss_pred             CCceEEccCchhhHHHHhhhhccCC
Q 038498          224 RTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       224 g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      | .+++|+||.+++|+.|++|+.++
T Consensus       234 g-~~va~~n~~~~~~~~a~~v~~~~  257 (282)
T 1rkq_A          234 G-VGVAVDNAIPSVKEVANFVTKSN  257 (282)
T ss_dssp             S-EEEECTTSCHHHHHHCSEECCCT
T ss_pred             C-cEEEecCCcHHHHhhCCEEecCC
Confidence            9 99999999999999999998653

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=100.00  E-value=1.3e-33  Score=236.38  Aligned_cols=228  Identities=18%  Similarity=0.173  Sum_probs=158.0

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIG   84 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~   84 (248)
                      +|+|+|||||||+++++.++++++++|++ +++ +.|+++|||++..+.+.+.. +.....++|++||+.+++ +++.++
T Consensus         2 ikli~~DlDGTLl~~~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~-l~~~~~~~I~~NGa~i~~~~~~~i~   79 (268)
T 1nf2_A            2 YRVFVFDLDGTLLNDNLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKK-YFKRTFPTIAYNGAIVYLPEEGVIL   79 (268)
T ss_dssp             BCEEEEECCCCCSCTTSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHH-HSSSCCCEEEGGGTEEEETTTEEEE
T ss_pred             ccEEEEeCCCcCCCCCCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHH-hCCCCCeEEEeCCeEEECCCCCEEE
Confidence            68999999999999999999999999999 888 99999999999876665543 111112699999999999 888888


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccceeccccc----eecccCCC-CC-hhhhhhhhhcccc-----cc
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML----NISPIGRN-CS-QEERDEFERYDKI-----HN  153 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~-~~~~~~~~~~~~~-----~~  153 (248)
                      ...+    +.+.++++++.+.++.....+....+.|........    .+...... .. ......-..+.++     .+
T Consensus        80 ~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~  155 (268)
T 1nf2_A           80 NEKI----PPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPE  155 (268)
T ss_dssp             ECCB----CHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHH
T ss_pred             ecCC----CHHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHH
Confidence            8776    578899999988875222111111222221110000    00000000 00 0000000001111     01


Q ss_pred             chHHHHHHHHHHc-CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498          154 IRPKMVSVLREKF-AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVG  227 (248)
Q Consensus       154 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~  227 (248)
                      ..+.+.+.+.+.+ +.+.+..+  ++.++|++|++++|+.+++.+++     ++++++|||    +.||++|++.+| .+
T Consensus       156 ~~~~~~~~l~~~~~~~~~~~~s--~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD----~~nD~~~~~~ag-~~  228 (268)
T 1nf2_A          156 RLDELKEILSERFKDVVKVFKS--FPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGD----NENDLFMFEEAG-LR  228 (268)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEE--ETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEEC----SHHHHHHHTTCS-EE
T ss_pred             HHHHHHHHHHHHhcCCEEEEEe--cCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcC----chhhHHHHHHcC-CE
Confidence            2233444555555 34666555  56799999999999999999997     789999999    999999999999 99


Q ss_pred             EEccCchhhHHHHhhhhccC
Q 038498          228 HTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       228 ~av~Na~~~~k~~A~~v~~~  247 (248)
                      ++|+||.+++|+.|++|+.+
T Consensus       229 v~~~n~~~~~~~~a~~v~~~  248 (268)
T 1nf2_A          229 VAMENAIEKVKEASDIVTLT  248 (268)
T ss_dssp             EECTTSCHHHHHHCSEECCC
T ss_pred             EEecCCCHHHHhhCCEEEcc
Confidence            99999999999999999865

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=100.00  E-value=8.6e-33  Score=233.65  Aligned_cols=227  Identities=15%  Similarity=0.191  Sum_probs=156.9

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLI   83 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i   83 (248)
                      .+|+|+|||||||+++.+.+++.++++|++++++ +.++++|||++..+.+.+.. +.. ..++|+.||+.+++ .++.+
T Consensus         3 mikli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~-~~~~I~~NGa~i~~~~~~~~   80 (288)
T 1nrw_A            3 AMKLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEP-LGI-KTWVISANGAVIHDPEGRLY   80 (288)
T ss_dssp             -CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGG-GTC-CCEEEEGGGTEEECTTCCEE
T ss_pred             ceEEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC-CCcEEEcCCeEEEcCCCcEE
Confidence            3799999999999999999999999999999999 99999999999988776654 211 12689999999998 78888


Q ss_pred             EEeecccccchHHHHHHHHHHHHhhccccccccccccceecc-c-cce----e---cc-----------------cCCCC
Q 038498           84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-G-MLN----I---SP-----------------IGRNC  137 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~---~~-----------------~~~~~  137 (248)
                      +...+    +.+.+.++++.+.+......+....+.|..... . ...    +   .+                 .....
T Consensus        81 ~~~~~----~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (288)
T 1nrw_A           81 HHETI----DKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAY  156 (288)
T ss_dssp             EECCC----CHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEE
T ss_pred             EEeeC----CHHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCCceE
Confidence            88876    468889999988775322212111222221100 0 000    0   00                 00000


Q ss_pred             Chhhhhhhh------hcccc---c---cchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----c
Q 038498          138 SQEERDEFE------RYDKI---H---NIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----F  200 (248)
Q Consensus       138 ~~~~~~~~~------~~~~~---~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~  200 (248)
                      . .....+.      .+-++   .   +..+.+.+.+.+ ++++.+.  .+++.++||+|++++|+.|++.+++     +
T Consensus       157 ~-~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~-~~~~~~~--~s~~~~lei~~~~~~K~~~~~~~~~~~~~~~  232 (288)
T 1nrw_A          157 I-NSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEH-AEDLTLV--SSAEHNFELSSRKASKGQALKRLAKQLNIPL  232 (288)
T ss_dssp             C-SCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTT-CTTEEEE--CSSTTEEEEEETTCSHHHHHHHHHHHTTCCG
T ss_pred             c-CCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhh-CCCEEEE--eeCCCcEEEecCCCChHHHHHHHHHHhCCCH
Confidence            0 0000000      00000   0   112223333333 4554443  3368899999999999999999997     7


Q ss_pred             CCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          201 NEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       201 ~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +++++|||    +.||++|++.+| .+++|+||.+++|+.|++|+++
T Consensus       233 ~~~~~~GD----~~nD~~m~~~ag-~~va~~~~~~~~~~~a~~v~~~  274 (288)
T 1nrw_A          233 EETAAVGD----SLNDKSMLEAAG-KGVAMGNAREDIKSIADAVTLT  274 (288)
T ss_dssp             GGEEEEES----SGGGHHHHHHSS-EEEECTTCCHHHHHHCSEECCC
T ss_pred             HHEEEEcC----CHHHHHHHHHcC-cEEEEcCCCHHHHhhCceeecC
Confidence            79999999    999999999999 8999999999999999999865

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.98  E-value=6.3e-32  Score=225.07  Aligned_cols=226  Identities=15%  Similarity=0.129  Sum_probs=156.4

Q ss_pred             eEEEEecCCCCCCCCCC-CCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccccc--CCCceEEecCCcEEEeCCcEE
Q 038498            8 LLALFDVDGTLTAPRKA-ATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVI--DEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus         8 kli~~DlDGTLl~~~~~-i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~--~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      |+|+|||||||+++++. ++++++++|++++++ +.++++|||+ ..+.+.+.. +.  ..++++|+.||+.++++++.+
T Consensus         3 kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~-l~~~~~~~~~i~~nGa~i~~~~~~i   80 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSE-LQDRNLIDGYITMNGAYCFVGEEVI   80 (261)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHH-HHHTTCCCEEEEGGGTEEEETTEEE
T ss_pred             cEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHH-hCcccccCeEEEeCCEEEEECCEEE
Confidence            89999999999999888 999999999999999 9999999999 765433322 11  113578999999999988888


Q ss_pred             EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccc---eecccCC-CCChhhhhhhh---hccccc-cch
Q 038498           84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML---NISPIGR-NCSQEERDEFE---RYDKIH-NIR  155 (248)
Q Consensus        84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~---~~~~~~-~~~  155 (248)
                      +...+    +.+.++++++.+.++.....+....+.|........   .+..... .... ....+.   .+.++. ...
T Consensus        81 ~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~~~~  155 (261)
T 2rbk_A           81 YKSAI----PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPT-VSFEEASNKEVIQMTPFIT  155 (261)
T ss_dssp             EECCC----CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCB-CCHHHHHTSCCSEEEECCC
T ss_pred             EecCC----CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCc-cccchhccCceeEEEEEeC
Confidence            88876    478899999988876322222112222322110000   0000000 0000 000000   011110 001


Q ss_pred             HHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          156 PKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       156 ~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +.....+.+.++++.+..+  ++.++||+|++++|+.+++++++     ++++++|||    +.||++|++.+| .+++|
T Consensus       156 ~~~~~~~~~~~~~~~~~~s--~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD----~~nD~~~~~~ag-~~v~~  228 (261)
T 2rbk_A          156 EEEEKEVLPSIPTCEIGRW--YPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGD----GGNDISMLRHAA-IGVAM  228 (261)
T ss_dssp             HHHHHHHGGGSTTCEEECS--STTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEEC
T ss_pred             HHHHHHHHHhcCCeEEEEe--cCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHcC-ceEEe
Confidence            1222346666776554444  67899999999999999999996     789999999    999999999999 99999


Q ss_pred             cCchhhHHHHhhhhccC
Q 038498          231 TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~~~  247 (248)
                      +||.+++|+.|++|+.+
T Consensus       229 ~n~~~~~~~~a~~v~~~  245 (261)
T 2rbk_A          229 GQAKEDVKAAADYVTAP  245 (261)
T ss_dssp             TTSCHHHHHHSSEECCC
T ss_pred             cCccHHHHhhCCEEecc
Confidence            99999999999999865

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=99.97  E-value=1.5e-31  Score=220.43  Aligned_cols=201  Identities=14%  Similarity=0.123  Sum_probs=139.8

Q ss_pred             ceEEEEecCCCCCCC-----CCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCc
Q 038498            7 GLLALFDVDGTLTAP-----RKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGK   81 (248)
Q Consensus         7 ~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~   81 (248)
                      +|+|+|||||||++.     +..++++++++|++|+++..|+++|||++..+.+.+.. +    .++|++||+.++++++
T Consensus         1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~-l----~~~I~~nGa~i~~~~~   75 (239)
T 1u02_A            1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPL-D----INMICYHGACSKINGQ   75 (239)
T ss_dssp             -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCS-S----CEEEEGGGTEEEETTE
T ss_pred             CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhcc-c----hheEEECCEEEeeCCe
Confidence            589999999999983     45799999999999987679999999999999888875 2    4899999999999777


Q ss_pred             EEEEe--ecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHH
Q 038498           82 LIGTQ--SLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMV  159 (248)
Q Consensus        82 ~i~~~--~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (248)
                      .++..  .....++.+.++++++.+.+..   .+      +.+.......  ...+....        +.  ....+.+.
T Consensus        76 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~---~~------~~~~~~~~~~--~~~~~~~~--------~~--~~~~~~~~  134 (239)
T 1u02_A           76 IVYNNGSDRFLGVFDRIYEDTRSWVSDFP---GL------RIYRKNLAVL--YHLGLMGA--------DM--KPKLRSRI  134 (239)
T ss_dssp             EEECTTGGGGHHHHHHHHHHHTTHHHHST---TC------EEEEETTEEE--EECTTSCS--------TT--HHHHHHHH
T ss_pred             eeecccccccchhhHHHHHHHHHHHhhCC---Cc------EEEecCCEEE--EEcCCCCh--------hH--HHHHHHHH
Confidence            64320  1111245677777777776642   11      1111111000  00011100        00  01122333


Q ss_pred             HHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhC--CCceEEccCchhh
Q 038498          160 SVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESE--RTVGHTVTSPEDT  236 (248)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~--g~~~~av~Na~~~  236 (248)
                      ..+.+. +++.+ .+  +..++||+|+++|||.|+++|++ .. +++|||    +.||++||+.+  | +++||+||   
T Consensus       135 ~~l~~~-~~~~~-~~--~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD----~~ND~~Ml~~a~~g-~~vam~Na---  201 (239)
T 1u02_A          135 EEIARI-FGVET-YY--GKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD----DATDEAAFEANDDA-LTIKVGEG---  201 (239)
T ss_dssp             HHHHHH-HTCEE-EE--CSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES----SHHHHHHHHTTTTS-EEEEESSS---
T ss_pred             HHHhcc-CCcEE-Ee--CCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC----CCccHHHHHHhhCC-cEEEECCC---
Confidence            334433 34443 33  57899999999999999999998 55 999999    99999999999  9 99999999   


Q ss_pred             HHHHhhhhccC
Q 038498          237 MEKCKALFLAK  247 (248)
Q Consensus       237 ~k~~A~~v~~~  247 (248)
                       |+.|++|+++
T Consensus       202 -~~~A~~v~~~  211 (239)
T 1u02_A          202 -ETHAKFHVAD  211 (239)
T ss_dssp             -CCCCSEEESS
T ss_pred             -CCcceEEeCC
Confidence             5678887754

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.97  E-value=3.3e-31  Score=222.73  Aligned_cols=229  Identities=14%  Similarity=0.082  Sum_probs=136.8

Q ss_pred             CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEE-e
Q 038498            1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAH-K   78 (248)
Q Consensus         1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~-~   78 (248)
                      |...+++|+|+|||||||+++++.++++++++|++|+++ +.|+++|||++..+.+.+.. +.....++|++||+.++ +
T Consensus         3 m~~~m~~~li~~DlDGTLl~~~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~I~~NGa~i~~~   81 (275)
T 1xvi_A            3 MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKT-LGLQGLPLIAENGAVIQLA   81 (275)
T ss_dssp             ---CCCCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHH-TTCTTSCEEEGGGTEEECC
T ss_pred             cccccCceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCCeEEEeCCCeEEec
Confidence            556678899999999999998778889999999999999 99999999999887766654 11111269999999998 4


Q ss_pred             C-Cc-----EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhh---hcc
Q 038498           79 D-GK-----LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFE---RYD  149 (248)
Q Consensus        79 ~-~~-----~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  149 (248)
                      . ++     .++...+    +.+.++++++.+.+.. ...+....+.+.........+......  ......+.   .+.
T Consensus        82 ~~~~~~~~~~~~~~~l----~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  154 (275)
T 1xvi_A           82 EQWQEIDGFPRIISGI----SHGEISLVLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAA--LTQLHEASVTLIWR  154 (275)
T ss_dssp             TTCTTSTTTTEEECSS----CHHHHHHHHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHH--HHHCCSSCEEEEEC
T ss_pred             CcccccCceEEEecCC----CHHHHHHHHHHHHHhh-CcceeccCcCCHHHHHHhhCCchHHHH--HHHhhccCceeEec
Confidence            3 34     5666665    5788888888876631 111110001110000000000000000  00000000   000


Q ss_pred             ccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc------cCC--EEEEcCCCCCCCCCHHHHh
Q 038498          150 KIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD------FNE--IHFFGDKTYKGGNDHEIFE  221 (248)
Q Consensus       150 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~------~~~--~~aiGD~~~~~~NDi~M~~  221 (248)
                      ...+..+.+.+.+.+ . ++.+  ..+ ..++||+|++++|+.|++++++      +++  +++|||    +.||++||+
T Consensus       155 ~~~~~~~~~~~~l~~-~-~~~~--~~~-~~~leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD----~~nD~~m~~  225 (275)
T 1xvi_A          155 DSDERMAQFTARLNE-L-GLQF--MQG-ARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGD----GPNDAPLLE  225 (275)
T ss_dssp             SCHHHHHHHHHHHHH-T-TEEE--EEC-SSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEES----SGGGHHHHH
T ss_pred             CCHHHHHHHHHHHHh-h-CeEE--EEC-CceEEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECC----ChhhHHHHH
Confidence            000112223333332 1 3333  332 4689999999999999999986      457  999999    999999999


Q ss_pred             hCCCceEEccCch---hhHHHH--hh-hhccC
Q 038498          222 SERTVGHTVTSPE---DTMEKC--KA-LFLAK  247 (248)
Q Consensus       222 ~~g~~~~av~Na~---~~~k~~--A~-~v~~~  247 (248)
                      .+| .+++|+||.   +++|+.  |+ +|+.+
T Consensus       226 ~ag-~~va~~n~~~~~~~~~~~~~a~~~v~~~  256 (275)
T 1xvi_A          226 VMD-YAVIVKGLNREGVHLHDEDPARVWRTQR  256 (275)
T ss_dssp             TSS-EEEECCCCC-------------------
T ss_pred             hCC-ceEEecCCCccchhhccccCCceeEccC
Confidence            999 999999998   677764  67 88754

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.97  E-value=8.6e-31  Score=214.34  Aligned_cols=201  Identities=19%  Similarity=0.177  Sum_probs=145.2

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLI   83 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i   83 (248)
                      .+|+|+||+||||+++++.++++++++|++|+++ +.++++|||++..+.+.+.. +.. ..++|++||+.+++ +++.+
T Consensus         4 m~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~-l~~-~~~~I~~NGa~i~~~~~~~i   81 (227)
T 1l6r_A            4 MIRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIF-LGI-NGPVFGENGGIMFDNDGSIK   81 (227)
T ss_dssp             CCCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTC-CSCEEEGGGTEEECTTSCEE
T ss_pred             ceEEEEEECCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHH-hCC-CCeEEEeCCcEEEeCCCCEE
Confidence            4799999999999999899999999999999999 99999999999876665543 111 12699999999997 77776


Q ss_pred             -EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHH
Q 038498           84 -GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVL  162 (248)
Q Consensus        84 -~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  162 (248)
                       +...    +  +.++++ +.+.+.+ .     ....|..   .   + .. ...     ..   . .... .++....+
T Consensus        82 ~~~~~----l--~~~~~i-~~~~~~~-~-----~~~~~~~---~---~-~~-~~~-----~~---~-~~~~-~~~~~~~~  130 (227)
T 1l6r_A           82 KFFSN----E--GTNKFL-EEMSKRT-S-----MRSILTN---R---W-RE-AST-----GF---D-IDPE-DVDYVRKE  130 (227)
T ss_dssp             ESSCS----H--HHHHHH-HHHTTTS-S-----CBCCGGG---G---G-CS-SSE-----EE---B-CCGG-GHHHHHHH
T ss_pred             EEecc----H--HHHHHH-HHHHHHh-c-----CCccccc---c---c-ee-ccc-----ce---E-EecC-CHHHHHHH
Confidence             4332    3  556666 6555411 0     1111110   0   0 00 000     00   0 0001 11223344


Q ss_pred             HHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhH
Q 038498          163 REKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTM  237 (248)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~  237 (248)
                      .+.+ ++.+. +  +..++||+|++++|+.+++.+++     ++++++|||    +.||++|++.+| .+++|+||.+++
T Consensus       131 ~~~~-~~~~~-~--~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD----~~nD~~m~~~ag-~~va~~n~~~~~  201 (227)
T 1l6r_A          131 AESR-GFVIF-Y--SGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD----SNNDMPMFQLPV-RKACPANATDNI  201 (227)
T ss_dssp             HHTT-TEEEE-E--ETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC----SGGGHHHHTSSS-EEEECTTSCHHH
T ss_pred             HHhc-CEEEE-e--cCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECC----cHHhHHHHHHcC-ceEEecCchHHH
Confidence            4445 55454 4  57899999999999999999996     679999999    999999999999 999999999999


Q ss_pred             HHHhhhhccCC
Q 038498          238 EKCKALFLAKP  248 (248)
Q Consensus       238 k~~A~~v~~~~  248 (248)
                      |+.|++|+.++
T Consensus       202 k~~a~~v~~~~  212 (227)
T 1l6r_A          202 KAVSDFVSDYS  212 (227)
T ss_dssp             HHHCSEECSCC
T ss_pred             HHhCCEEecCC
Confidence            99999998653

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.97  E-value=1.9e-31  Score=221.08  Aligned_cols=215  Identities=17%  Similarity=0.107  Sum_probs=142.0

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC------
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD------   79 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~------   79 (248)
                      +|+|+|||||||+ ++..++ +++++|++|+++ +.|+++|||++..+.+.+.. + ....++|++||+.+++.      
T Consensus         2 ikli~~DlDGTLl-~~~~~~-~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~-~-~~~~~~I~~NGa~i~~~~~~~~~   77 (249)
T 2zos_A            2 IRLIFLDIDKTLI-PGYEPD-PAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKE-L-EVETPFISENGSAIFIPKGYFPF   77 (249)
T ss_dssp             EEEEEECCSTTTC-TTSCSG-GGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHH-H-TCCSCEEETTTTEEECCTTCCC-
T ss_pred             ccEEEEeCCCCcc-CCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-c-CCCccEEEeCCeEEEccCCcccc
Confidence            6999999999999 665565 499999999999 99999999999877665553 1 11237999999999973      


Q ss_pred             --------CcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhh-ccc
Q 038498           80 --------GKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFER-YDK  150 (248)
Q Consensus        80 --------~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  150 (248)
                              ++.++...+    +.+.++++++.+.+... ........  .........+...  .........+.. + .
T Consensus        78 ~~~~~~~~~~~i~~~~l----~~~~~~~i~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~  147 (249)
T 2zos_A           78 DVKGKEVGNYIVIELGI----RVEKIREELKKLENIYG-LKYYGNST--KEEIEKFTGMPPE--LVPLAMEREYSETI-F  147 (249)
T ss_dssp             -----CCCCCCEEECSC----CHHHHHHHHHHHHHHHT-CEEGGGSC--HHHHHHHHCCCTT--THHHHHCCSSCEEE-E
T ss_pred             cccccccCceEEEecCC----CHHHHHHHHHHHHhhcC-EEEecCCC--HHHHHHHhCCChh--HhhhhhhhhhcCce-E
Confidence                    577777766    57888889888876411 10000000  0000000000000  000000000000 0 0


Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc------cCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD------FNEIHFFGDKTYKGGNDHEIFESER  224 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~------~~~~~aiGD~~~~~~NDi~M~~~~g  224 (248)
                      .....+. .+.+.+  .++.+..+   ..++||+| ++||+.||++|++      ++++++|||    +.||++||+.+|
T Consensus       148 ~~~~~~~-~~~l~~--~~~~~~~s---~~~~ei~~-g~sKg~al~~l~~~~~~~~~~~viafGD----~~NDi~Ml~~ag  216 (249)
T 2zos_A          148 EWSRDGW-EEVLVE--GGFKVTMG---SRFYTVHG-NSDKGKAAKILLDFYKRLGQIESYAVGD----SYNDFPMFEVVD  216 (249)
T ss_dssp             ECSSSCH-HHHHHH--TTCEEEEC---SSSEEEEC-SCCHHHHHHHHHHHHHTTSCEEEEEEEC----SGGGHHHHTTSS
T ss_pred             ecCCHHH-HHHHHh--CCEEEEec---CCeEEEeC-CCChHHHHHHHHHHhccCCCceEEEECC----CcccHHHHHhCC
Confidence            0001111 333433  34545433   35799999 9999999999996      368999999    999999999999


Q ss_pred             CceEEccCch-hhHHHHhhhhccC
Q 038498          225 TVGHTVTSPE-DTMEKCKALFLAK  247 (248)
Q Consensus       225 ~~~~av~Na~-~~~k~~A~~v~~~  247 (248)
                       .++||+||. +++|+.|++|+.+
T Consensus       217 -~~va~gna~~~~~~~~a~~v~~~  239 (249)
T 2zos_A          217 -KVFIVGSLKHKKAQNVSSIIDVL  239 (249)
T ss_dssp             -EEEEESSCCCTTEEEESSHHHHH
T ss_pred             -cEEEeCCCCccccchhceEEecc
Confidence             999999999 8899999998854

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.97  E-value=2.9e-29  Score=205.55  Aligned_cols=203  Identities=16%  Similarity=0.141  Sum_probs=147.3

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIG   84 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~   84 (248)
                      .+|+|+|||||||+++++.+++++.++|++++++ +.|+++|||++..+.+.+.. +.. ..++|+.||+.++++++.++
T Consensus         2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~-l~~-~~~~i~~nGa~i~~~~~~~~   79 (231)
T 1wr8_A            2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASIL-IGT-SGPVVAEDGGAISYKKKRIF   79 (231)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHH-HTC-CSCEEEGGGTEEEETTEEEE
T ss_pred             ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHH-cCC-CCeEEEeCCcEEEeCCEEEE
Confidence            3699999999999999999999999999999999 99999999999876554433 111 12588999999998777765


Q ss_pred             EeecccccchHHHHHHHHHHH-HhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHH
Q 038498           85 TQSLKSFLGGEKLKEFINFTL-HYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLR  163 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  163 (248)
                      ...+      +.++++++.+. .++ ...+... ..|   +     +    ..        +....  .+..++....+.
T Consensus        80 ~~~l------~~~~~i~~~~~~~~~-~~~~~~~-~~~---~-----~----~~--------~~~~~--~~~~~~~~~~~~  129 (231)
T 1wr8_A           80 LASM------DEEWILWNEIRKRFP-NARTSYT-MPD---R-----R----AG--------LVIMR--ETINVETVREII  129 (231)
T ss_dssp             SCCC------SHHHHHHHHHHHHCT-TCCBCTT-GGG---C-----S----SC--------EEECT--TTSCHHHHHHHH
T ss_pred             eccH------HHHHHHHHHHHHhCC-CceEEec-CCC---c-----e----ee--------EEEEC--CCCCHHHHHHHH
Confidence            5543      56777887777 431 1111000 000   0     0    00        00000  011222334444


Q ss_pred             HHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhH
Q 038498          164 EKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTM  237 (248)
Q Consensus       164 ~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~  237 (248)
                      +.++ .+.+. +  +..++|++|++.+|+.+++++++     ++++++|||    +.||++|++.+| .+++|+|+.+++
T Consensus       130 ~~~~~~~~~~-~--~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD----~~nD~~~~~~ag-~~v~~~~~~~~~  201 (231)
T 1wr8_A          130 NELNLNLVAV-D--SGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD----GENDLDAFKVVG-YKVAVAQAPKIL  201 (231)
T ss_dssp             HHTTCSCEEE-E--CSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC----SGGGHHHHHHSS-EEEECTTSCHHH
T ss_pred             HhcCCcEEEE-e--cCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHcC-CeEEecCCCHHH
Confidence            5554 34454 4  67899999999999999999996     689999999    999999999999 999999999999


Q ss_pred             HHHhhhhccCC
Q 038498          238 EKCKALFLAKP  248 (248)
Q Consensus       238 k~~A~~v~~~~  248 (248)
                      |+.|++|+.++
T Consensus       202 ~~~a~~v~~~~  212 (231)
T 1wr8_A          202 KENADYVTKKE  212 (231)
T ss_dssp             HTTCSEECSSC
T ss_pred             HhhCCEEecCC
Confidence            99999998653

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.96  E-value=1.7e-28  Score=202.77  Aligned_cols=205  Identities=19%  Similarity=0.255  Sum_probs=127.5

Q ss_pred             eEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEe
Q 038498            8 LLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQ   86 (248)
Q Consensus         8 kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~   86 (248)
                      ++|+|||||||++++..+ +++.++|++++ + +.|+++|||++..+.+.+...-...++++|++||+.+++..      
T Consensus         4 ~li~~DlDGTLl~~~~~~-~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~------   75 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQAL-EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE------   75 (244)
T ss_dssp             EEEEECTBTTTBSCHHHH-HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT------
T ss_pred             eEEEEeCCCCCcCCHHHH-HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCC------
Confidence            499999999999986544 67888888855 6 99999999999877665543101124689999999998843      


Q ss_pred             ecccccchHHHHHHHH-----HHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccc--cccchHHHH
Q 038498           87 SLKSFLGGEKLKEFIN-----FTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDK--IHNIRPKMV  159 (248)
Q Consensus        87 ~~~~~i~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  159 (248)
                      .+    +......+..     .+........- .......  ......+.             +. .+.  .....+.+.
T Consensus        76 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~ki~-------------~~-~~~~~~~~~~~~l~  134 (244)
T 1s2o_A           76 GL----DQHWADYLSEHWQRDILQAIADGFEA-LKPQSPL--EQNPWKIS-------------YH-LDPQACPTVIDQLT  134 (244)
T ss_dssp             EE----CHHHHHHHHTTCCHHHHHHHHHTCTT-EEECCGG--GCBTTBEE-------------EE-ECTTSCTHHHHHHH
T ss_pred             Cc----ChHHHHHHhccccHHHHHHHHHhccC-ccccCcc--cCCCeEEE-------------EE-eChhhHHHHHHHHH
Confidence            11    1222111100     00000000000 0000000  00000000             00 000  001122222


Q ss_pred             HHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          160 SVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      +.+.+...++.+..+  +..++||+|++++|+.|++++++     ++++++|||    +.||++||+.+| .+++|+||.
T Consensus       135 ~~~~~~~~~~~~~~s--~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD----~~nD~~m~~~~g-~~va~~na~  207 (244)
T 1s2o_A          135 EMLKETGIPVQVIFS--SGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGD----SGNDIGLFETSA-RGVIVRNAQ  207 (244)
T ss_dssp             HHHHTSSCCEEEEEE--TTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEEC----SGGGHHHHTSSS-EEEECTTCC
T ss_pred             HHHHhcCCCeEEEEe--cCceEEeccCCCChHHHHHHHHHHhCCCHHHEEEECC----chhhHHHHhccC-cEEEEcCCc
Confidence            333322123444444  67899999999999999999997     689999999    999999999999 999999999


Q ss_pred             hhHHHH-------hhhhccCC
Q 038498          235 DTMEKC-------KALFLAKP  248 (248)
Q Consensus       235 ~~~k~~-------A~~v~~~~  248 (248)
                      +++|++       |++|+.++
T Consensus       208 ~~~k~~a~~~~~~a~~v~~~~  228 (244)
T 1s2o_A          208 PELLHWYDQWGDSRHYRAQSS  228 (244)
T ss_dssp             HHHHHHHHHHCCTTEEECSSC
T ss_pred             HHHHHHHhcccccceeecCCc
Confidence            999997       77888653

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.96  E-value=1.1e-28  Score=205.22  Aligned_cols=208  Identities=17%  Similarity=0.068  Sum_probs=140.7

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CC------
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DG------   80 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~------   80 (248)
                      +|+|||||||+++. .+++++.++|++++++ +.++++|||++..+. .++.     .+++|++||+.+++ ..      
T Consensus         2 li~~DlDGTLl~~~-~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~-~l~~-----~~~~i~~nGa~i~~~~~~~~~~~   74 (259)
T 3zx4_A            2 IVFTDLDGTLLDER-GELGPAREALERLRALGVPVVPVTAKTRKEVE-ALGL-----EPPFIVENGGGLYLPRDWPVRAG   74 (259)
T ss_dssp             EEEECCCCCCSCSS-SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH-HTTC-----CSSEEEGGGTEEEEETTCSSCCS
T ss_pred             EEEEeCCCCCcCCC-cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH-HcCC-----CCcEEEECCcEEEeCCCCccccc
Confidence            79999999999999 9999999999999999 999999999999888 5553     24789999999998 33      


Q ss_pred             -----cEEEEeecccccchHHHHHHHHHHHH-hhccccccccccccceeccccceecccCCCCChhhhhhhh---hcccc
Q 038498           81 -----KLIGTQSLKSFLGGEKLKEFINFTLH-YIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFE---RYDKI  151 (248)
Q Consensus        81 -----~~i~~~~~~~~i~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  151 (248)
                           +.++...+    +.+.+.++++.+.+ +.........+  +.........+......  ......+.   .+. .
T Consensus        75 ~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~  145 (259)
T 3zx4_A           75 RPKGGYRVVSLAW----PYRKVRARLREAEALAGRPILGYGDL--TAEAVARLTGLSREAAR--RAKAREYDETLVLC-P  145 (259)
T ss_dssp             EEETTEEEEECSC----CHHHHHHHHHHHHHHHTSCCCBGGGB--CHHHHHHHHCCCHHHHH--HHTCCSSCEEBCCC-T
T ss_pred             ccCCceEEEEcCC----CHHHHHHHHHHHHHhcCceEEEcCCC--CHHHHHHHcCCCHHHhh--hhhccccceeEEeC-c
Confidence                 25666655    57888889988876 42221111000  00000000000000000  00000000   010 0


Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----c--CCEEEEcCCCCCCCCCHHHHhhCC
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----F--NEIHFFGDKTYKGGNDHEIFESER  224 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~--~~~~aiGD~~~~~~NDi~M~~~~g  224 (248)
                      . ..+.+.+.+.+.  ++.+..+  + .++|++|+ ++|+.|++++++     +  +++++|||    +.||++||+.+|
T Consensus       146 ~-~~~~~~~~l~~~--~~~~~~s--~-~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD----~~nD~~m~~~ag  214 (259)
T 3zx4_A          146 E-EVEAVLEALEAV--GLEWTHG--G-RFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGD----SLNDLPLFRAVD  214 (259)
T ss_dssp             T-THHHHHHHHHHT--TCEEEEC--S-SSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEES----SGGGHHHHHTSS
T ss_pred             H-HHHHHHHHHHHC--CcEEEec--C-ceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeC----CHHHHHHHHhCC
Confidence            1 233444444433  3445443  4 46799999 999999999997     5  99999999    999999999999


Q ss_pred             CceEEccCchhhHHHHhhhhccC
Q 038498          225 TVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       225 ~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                       .+++|+||.+ +  .|++|+.+
T Consensus       215 -~~va~~na~~-~--~~~~~~~~  233 (259)
T 3zx4_A          215 -LAVYVGRGDP-P--EGVLATPA  233 (259)
T ss_dssp             -EEEECSSSCC-C--TTCEECSS
T ss_pred             -CeEEeCChhh-c--CCcEEeCC
Confidence             9999999999 6  66787754

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.92  E-value=7.7e-24  Score=178.54  Aligned_cols=220  Identities=13%  Similarity=0.156  Sum_probs=143.0

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHH--------HHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMR--------ELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGL   74 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~--------~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa   74 (248)
                      ..+|+|+|||||||+++.  +++.+..++.        .+.++ +.++++|||++..+.+.+... +...++++++.+|.
T Consensus        20 ~~~kliifDlDGTLlds~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~g~   97 (289)
T 3gyg_A           20 HPQYIVFCDFDETYFPHT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDLGT   97 (289)
T ss_dssp             SCSEEEEEETBTTTBCSS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETTTT
T ss_pred             CCCeEEEEECCCCCcCCC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecCCc
Confidence            357999999999999986  8888888888        44566 999999999998766655431 22335688999888


Q ss_pred             EEEe---CCcEEEEeec----ccccchHHHHHHHHHHHHh-hccccccccccccceeccccceecccCCCCChhhhhhhh
Q 038498           75 VAHK---DGKLIGTQSL----KSFLGGEKLKEFINFTLHY-IADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFE  146 (248)
Q Consensus        75 ~i~~---~~~~i~~~~~----~~~i~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (248)
                      .++.   +|..+....+    ...+..+.+.++++.+.++ .....+..    ..+  ........+.....  ....  
T Consensus        98 ~i~~~~~ng~~~~~~~~~~~~~~~~~~~~v~e~l~~l~~~~g~~l~~~t----~~~--~~~~~~~~~~~~~~--~~~~--  167 (289)
T 3gyg_A           98 EITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNILLNPQT----QLG--KSRYKHNFYYQEQD--EIND--  167 (289)
T ss_dssp             EEEECCSSSTTEECHHHHHHHHTTCCHHHHHHHHHHHHHHSSCCCEEGG----GTC--GGGTTCCEEEECCC--HHHH--
T ss_pred             eEEEEcCCCcEeecCchhhhhcccCCHHHHHHHHHHHHhhhCceeeecc----ccc--ccceEEEEEEeccc--cccc--
Confidence            8876   4554443311    1113456777777777664 22111110    000  00000000000000  0000  


Q ss_pred             hccccccchHHHHHHHHHHcCCceEEEEecC--------ceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCC
Q 038498          147 RYDKIHNIRPKMVSVLREKFAHLNLTFSIGG--------QISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKG  213 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~  213 (248)
                           ....+.+ ..+.+.++ +...+....        ...+|+.|.+.+|+.+++++++     ++++++|||    +
T Consensus       168 -----~~~~~~~-~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GD----s  236 (289)
T 3gyg_A          168 -----KKNLLAI-EKICEEYG-VSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGD----S  236 (289)
T ss_dssp             -----HHHHHHH-HHHHHHHT-EEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEEC----S
T ss_pred             -----hHHHHHH-HHHHHHcC-CCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcC----C
Confidence                 0011122 23333333 233333222        2789999999999999999997     789999999    9


Q ss_pred             CCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          214 GNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       214 ~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .||++|++.+| .+++|+|+++++++.|++|+.+|
T Consensus       237 ~~D~~~~~~ag-~~~~~~~~~~~~~~~a~~v~~~~  270 (289)
T 3gyg_A          237 GNDVRMLQTVG-NGYLLKNATQEAKNLHNLITDSE  270 (289)
T ss_dssp             GGGHHHHTTSS-EEEECTTCCHHHHHHCCCBCSSC
T ss_pred             HHHHHHHHhCC-cEEEECCccHHHHHhCCEEcCCC
Confidence            99999999999 99999999999999999998765

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.78  E-value=1.1e-23  Score=181.30  Aligned_cols=217  Identities=10%  Similarity=-0.012  Sum_probs=124.1

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHH---HHh--cccccCCCceEEecCCcE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKIS---EQL--GKTVIDEYDYVFSENGLV   75 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~---~~l--~~~~~~~~~~~i~~nGa~   75 (248)
                      +++|+|+|||||||+++++.      ++|.++... +.++++|||++   ..+.   +.+  .. +... .++|+.||+.
T Consensus        19 ~~~kli~fDlDGTLld~~~~------~~l~~~~~~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~-l~~~-~~~i~~nGa~   90 (332)
T 1y8a_A           19 FQGHMFFTDWEGPWILTDFA------LELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYT-LKLL-TPFLAAAGVK   90 (332)
T ss_dssp             -CCCEEEECSBTTTBCCCHH------HHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTH-HHHH-HHHHHHTTCC
T ss_pred             CCceEEEEECcCCCcCccHH------HHHHHHHHCCCEEEEEcCCCchhhhhhhhccCeechhh-cCCc-CeEEEcCCcE
Confidence            45799999999999988552      788888888 89999999998   5554   333  21 1011 1477899999


Q ss_pred             EEeCCcEEEEe-ecccccchHHHHHHHHHHHHhhcccccccccc-ccceeccccceec-cc-CCCCChhh---hhhhhhc
Q 038498           76 AHKDGKLIGTQ-SLKSFLGGEKLKEFINFTLHYIADLDIPIKRG-TFIEFRSGMLNIS-PI-GRNCSQEE---RDEFERY  148 (248)
Q Consensus        76 i~~~~~~i~~~-~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~~~  148 (248)
                      ++..++. ... .+    ..+.+.++++.+.+ .....+..... .|.........+. .. ........   ...+..+
T Consensus        91 i~~~~~~-~~~~~~----~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  164 (332)
T 1y8a_A           91 NRDVERI-AELSAK----FVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREE  164 (332)
T ss_dssp             HHHHHHH-HHHHCC----BCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHH
T ss_pred             EEECCeE-eeccCC----CHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhcccccccee
Confidence            8764443 222 12    35677788888776 43322211111 1221100000000 00 00000000   0000000


Q ss_pred             cccccchHHHH----HHHHHHcCCceEEEEecCce-EEE--EeeCCCCHHHHHHHhhccCC----EEEEcCCCCCCCCCH
Q 038498          149 DKIHNIRPKMV----SVLREKFAHLNLTFSIGGQI-SFD--VFPQGWDKTYCLRYLDDFNE----IHFFGDKTYKGGNDH  217 (248)
Q Consensus       149 ~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~-~~d--i~~~~~~K~~al~~l~~~~~----~~aiGD~~~~~~NDi  217 (248)
                      - +......+.    +.+ +.++++   +..+++. ++|  ++|++++|+.+++.+. +++    +++|||    +.||+
T Consensus       165 ~-~~~~~~~~~~~~~~~l-~~~~~~---~~~s~~~~~~e~ii~~~g~~K~~al~gi~-~~~~~~~via~GD----s~NDi  234 (332)
T 1y8a_A          165 L-LSIIDVIASLSGEELF-RKLDEL---FSRSEVRKIVESVKAVGAGEKAKIMRGYC-ESKGIDFPVVVGD----SISDY  234 (332)
T ss_dssp             H-HHHHHHHHHCCHHHHH-HHHHHH---HHSHHHHHHHHTCBCCCHHHHHHHHHHHH-HHHTCSSCEEEEC----SGGGH
T ss_pred             E-EecCHHHHhhhhHHHH-HHHHHH---HhhcCCCceeeEEecCCCCCHHHHHhccC-hhhcCceEEEEeC----cHhHH
Confidence            0 000000000    122 222222   1111222 334  8899999999999543 566    999999    99999


Q ss_pred             HHHhhC----CCceEEccCchhhHHHHhhhhccC
Q 038498          218 EIFESE----RTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       218 ~M~~~~----g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +||+.+    | .++|| ||.+++|+.|++|+.+
T Consensus       235 ~ml~~A~~~~g-~~vam-na~~~lk~~Ad~v~~~  266 (332)
T 1y8a_A          235 KMFEAARGLGG-VAIAF-NGNEYALKHADVVIIS  266 (332)
T ss_dssp             HHHHHHHHTTC-EEEEE-SCCHHHHTTCSEEEEC
T ss_pred             HHHHHHhhcCC-eEEEe-cCCHHHHhhCcEEecC
Confidence            999999    9 99999 9999999999999864

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.72  E-value=6.4e-18  Score=140.34  Aligned_cols=212  Identities=14%  Similarity=0.068  Sum_probs=111.5

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhccc-ccCCCceEEecCCcEEEe--
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--   78 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--   78 (248)
                      ++|+|+|||||||+++ ..++++++++|++++++ ++|+++||   |+...+.+.+... +....+.+++.||+.+..  
T Consensus         5 ~~kli~~DlDGTLl~~-~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~~~   83 (266)
T 3pdw_A            5 TYKGYLIDLDGTMYNG-TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIA   83 (266)
T ss_dssp             CCSEEEEECSSSTTCH-HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHH
T ss_pred             cCCEEEEeCcCceEeC-CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHHHHHH
Confidence            4899999999999987 55778899999999999 99999988   6666665555431 222334677777765532  


Q ss_pred             ---CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhh--hh--hcccc
Q 038498           79 ---DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDE--FE--RYDKI  151 (248)
Q Consensus        79 ---~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~  151 (248)
                         .++.+...      ...   .+.+.+.+.............+... .....+... ..........  +.  ..+..
T Consensus        84 ~~~~~~~~~~~------~~~---~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~i~~n~~~~  152 (266)
T 3pdw_A           84 QQKKDASVYVI------GEE---GIRQAIEENGLTFGGENADFVVVGI-DRSITYEKF-AVGCLAIRNGARFISTNGDIA  152 (266)
T ss_dssp             HHCTTCEEEEE------SCH---HHHHHHHHTTCEECCTTCSEEEECC-CTTCCHHHH-HHHHHHHHTTCEEEESCCCCE
T ss_pred             hhCCCCEEEEE------eCh---hHHHHHHHcCCccCCCCCCEEEEeC-CCCCCHHHH-HHHHHHHHCCCeEEEEcCCce
Confidence               12222221      112   2334444431110000000000000 000000000 0000000000  00  00000


Q ss_pred             c----c---chHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCC-CCCHH
Q 038498          152 H----N---IRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKG-GNDHE  218 (248)
Q Consensus       152 ~----~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~-~NDi~  218 (248)
                      .    .   ....+...+..             ....+..+.+.+|+.+++.+++     ++++++|||    + .||++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD----~~~~Di~  215 (266)
T 3pdw_A          153 IPTERGLLPGNGSLTSVLTV-------------STGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGD----NYATDIM  215 (266)
T ss_dssp             EEETTEEEECHHHHHHHHHH-------------HHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEES----CTTTHHH
T ss_pred             eECCCceEecchHHHHHHHH-------------HhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECC----CcHHHHH
Confidence            0    0   00001111111             1224467788999999999997     889999999    9 89999


Q ss_pred             HHhhCCCceEEccC----chhhHHH---HhhhhccC
Q 038498          219 IFESERTVGHTVTS----PEDTMEK---CKALFLAK  247 (248)
Q Consensus       219 M~~~~g~~~~av~N----a~~~~k~---~A~~v~~~  247 (248)
                      |++.+| ..+++.+    +.+++++   .|++|+++
T Consensus       216 ~~~~aG-~~~~~v~~g~~~~~~~~~~~~~~d~v~~~  250 (266)
T 3pdw_A          216 AGINAG-MDTLLVHTGVTKREHMTDDMEKPTHAIDS  250 (266)
T ss_dssp             HHHHHT-CEEEEECCC------CCTTSCCCSEEESS
T ss_pred             HHHHCC-CeEEEECCCCCChHHHHhcCCCCCEEeCC
Confidence            999999 5554444    6677777   38888764

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.71  E-value=3.7e-17  Score=128.42  Aligned_cols=121  Identities=17%  Similarity=0.188  Sum_probs=95.3

Q ss_pred             ccceEEEEecCCCCCCCCC----------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCC
Q 038498            5 KQGLLALFDVDGTLTAPRK----------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENG   73 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~----------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nG   73 (248)
                      +++|+|+||+||||+++..          .+++++.++|++|+++ ++++++|||+...+...+...   .++.++  +|
T Consensus         6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~l---gl~~~~--~~   80 (180)
T 1k1e_A            6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADL---GIKLFF--LG   80 (180)
T ss_dssp             GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHH---TCCEEE--ES
T ss_pred             hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHc---CCceee--cC
Confidence            4589999999999998742          3567899999999999 999999999876554444320   011110  00


Q ss_pred             cEEEeCCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhcccccc
Q 038498           74 LVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHN  153 (248)
Q Consensus        74 a~i~~~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (248)
                                                                                                      
T Consensus        81 --------------------------------------------------------------------------------   80 (180)
T 1k1e_A           81 --------------------------------------------------------------------------------   80 (180)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceE
Q 038498          154 IRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGH  228 (248)
Q Consensus       154 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~  228 (248)
                                                       ..+|+.+++.+++     ++++++|||    +.||++|++.+| .++
T Consensus        81 ---------------------------------~k~k~~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~~~~ag-~~~  122 (180)
T 1k1e_A           81 ---------------------------------KLEKETACFDLMKQAGVTAEQTAYIGD----DSVDLPAFAACG-TSF  122 (180)
T ss_dssp             ---------------------------------CSCHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEE
T ss_pred             ---------------------------------CCCcHHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHcC-CeE
Confidence                                             0467777777775     689999999    999999999999 999


Q ss_pred             EccCchhhHHHHhhhhccCC
Q 038498          229 TVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       229 av~Na~~~~k~~A~~v~~~~  248 (248)
                      +|+|+.+.+++.|++|+.+|
T Consensus       123 ~~~~~~~~~~~~ad~v~~~~  142 (180)
T 1k1e_A          123 AVADAPIYVKNAVDHVLSTH  142 (180)
T ss_dssp             ECTTSCHHHHTTSSEECSSC
T ss_pred             EeCCccHHHHhhCCEEecCC
Confidence            99999999999999998654

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.65  E-value=8.7e-16  Score=127.50  Aligned_cols=71  Identities=17%  Similarity=0.197  Sum_probs=58.0

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhccc-ccCCCceEEecCCcEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGKT-VIDEYDYVFSENGLVAH   77 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~   77 (248)
                      ++|+|+|||||||++++..+ ++++++|++++++ +.|+++|   ||++..+.+.+... +....+.+++.||+.+.
T Consensus         4 ~~kli~~DlDGTLl~~~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~   79 (264)
T 3epr_A            4 AYKGYLIDLDGTIYKGKSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVD   79 (264)
T ss_dssp             CCCEEEECCBTTTEETTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred             CCCEEEEeCCCceEeCCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHHH
Confidence            58999999999999998888 8999999999999 9999999   88887776666541 22234568888887654

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.64  E-value=3.1e-19  Score=145.39  Aligned_cols=214  Identities=12%  Similarity=0.040  Sum_probs=112.5

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhccc-ccCCCceEEecCCcEEEe--
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--   78 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--   78 (248)
                      ++|+|+||+||||+++.+.+++. .++++.+++. +.++++|   ||+...+.+.+... +....+.++..+++....  
T Consensus         2 ~~k~i~fDlDGTLl~~~~~~~~~-~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2c4n_A            2 TIKNVICDIDGVLMHDNVAVPGA-AEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLR   80 (250)
T ss_dssp             CCCEEEEECBTTTEETTEECTTH-HHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHH
T ss_pred             CccEEEEcCcceEEeCCEeCcCH-HHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHHHH
Confidence            47999999999999998888877 8999999999 9999999   99888777665431 111122444544432211  


Q ss_pred             --CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceec-cccceecccCCCCChhhhhhhhhc-----cc
Q 038498           79 --DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFR-SGMLNISPIGRNCSQEERDEFERY-----DK  150 (248)
Q Consensus        79 --~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~  150 (248)
                        ........         .+.++++.+.+....  +......+.... .....+..... ...........+     ..
T Consensus        81 ~~~~~~~~~~---------~~~~~l~~l~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~t~~~~~  148 (250)
T 2c4n_A           81 RQEGKKAYVV---------GEGALIHELYKAGFT--ITDVNPDFVIVGETRSYNWDMMHK-AAYFVANGARFIATNPDTH  148 (250)
T ss_dssp             TSSCCEEEEE---------CCTHHHHHHHHTTCE--ECSSSCSEEEECCCTTCCHHHHHH-HHHHHHTTCEEEESCCCSB
T ss_pred             hcCCCEEEEE---------cCHHHHHHHHHcCCc--ccCCCCCEEEEeCCCCCCHHHHHH-HHHHHHCCCEEEEECCCCC
Confidence              11222211         223345555553211  110000011000 00000000000 000000000000     00


Q ss_pred             cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCC-CCCHHHHhhCC
Q 038498          151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKG-GNDHEIFESER  224 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~-~NDi~M~~~~g  224 (248)
                      .....+.+ ..+...+.         ...+.|+++.+.+|+.+++.+++     ++++++|||    + .||++|++.+|
T Consensus       149 ~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD----~~~nDi~~~~~aG  214 (250)
T 2c4n_A          149 GRGFYPAC-GALCAGIE---------KISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGD----NLRTDILAGFQAG  214 (250)
T ss_dssp             SSTTCBCH-HHHHHHHH---------HHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEES----CTTTHHHHHHHTT
T ss_pred             CCCeeecc-hHHHHHHH---------HHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECC----CchhHHHHHHHcC
Confidence            00000011 01111111         11234678899999999999997     889999999    9 79999999999


Q ss_pred             Cce-EE--ccCch-hhHH---HHhhhhccC
Q 038498          225 TVG-HT--VTSPE-DTME---KCKALFLAK  247 (248)
Q Consensus       225 ~~~-~a--v~Na~-~~~k---~~A~~v~~~  247 (248)
                       .+ +.  ++++. ++++   ..|++|+.+
T Consensus       215 -~~~~~v~~g~~~~~~~~~~~~~~~~v~~~  243 (250)
T 2c4n_A          215 -LETILVLSGVSSLDDIDSMPFRPSWIYPS  243 (250)
T ss_dssp             -CEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred             -CeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence             55 33  45544 4554   357776653

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.61  E-value=2.9e-15  Score=124.31  Aligned_cols=70  Identities=16%  Similarity=0.169  Sum_probs=54.2

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhccc-ccCCCceEEecCCcEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGKT-VIDEYDYVFSENGLVA   76 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~~~-~~~~~~~~i~~nGa~i   76 (248)
                      ++|+|+||+||||++++. +.++++++|++++++ ++++++||   |+...+.+.+... +....+.+++.||+..
T Consensus         7 ~~kli~~DlDGTLl~~~~-~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~   81 (268)
T 3qgm_A            7 DKKGYIIDIDGVIGKSVT-PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATA   81 (268)
T ss_dssp             CCSEEEEECBTTTEETTE-ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred             cCCEEEEcCcCcEECCCE-eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHH
Confidence            489999999999998755 567899999999999 99999999   5666666555431 2223356888888754

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.61  E-value=2.6e-15  Score=116.63  Aligned_cols=54  Identities=13%  Similarity=0.188  Sum_probs=48.1

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +|+.+++.+++     ++++++|||    +.||++|++.+| .+++|+||.+++|+.|++|+.+
T Consensus        83 ~K~~~l~~~~~~~gi~~~~~~~vGD----~~nDi~~~~~ag-~~~a~~na~~~~k~~Ad~v~~~  141 (168)
T 3ewi_A           83 DKLATVDEWRKEMGLCWKEVAYLGN----EVSDEECLKRVG-LSAVPADACSGAQKAVGYICKC  141 (168)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEECC----SGGGHHHHHHSS-EEEECTTCCHHHHTTCSEECSS
T ss_pred             ChHHHHHHHHHHcCcChHHEEEEeC----CHhHHHHHHHCC-CEEEeCChhHHHHHhCCEEeCC
Confidence            46666666664     679999999    999999999999 9999999999999999999865

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.57  E-value=8e-16  Score=126.92  Aligned_cols=69  Identities=16%  Similarity=0.118  Sum_probs=51.9

Q ss_pred             cceEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhccc-ccCCCceEEecCCc
Q 038498            6 QGLLALFDVDGTLTAP---RKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGKT-VIDEYDYVFSENGL   74 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~~-~~~~~~~~i~~nGa   74 (248)
                      ++|+|+|||||||+++   ++.+++.+.++++.++++ +.++++|   ||+...+.+.+... +....+.+++.+|+
T Consensus        11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~~~~~~   87 (271)
T 2x4d_A           11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPA   87 (271)
T ss_dssp             TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEECHHHH
T ss_pred             cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHeecHHHH
Confidence            4899999999999997   455788899999999999 9999999   99988776665531 11112345555554

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.57  E-value=8.8e-15  Score=121.46  Aligned_cols=72  Identities=21%  Similarity=0.230  Sum_probs=56.7

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhccc-ccCCCceEEecCCcEEE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGKT-VIDEYDYVFSENGLVAH   77 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~   77 (248)
                      +++++|+||+||||+++ ..+++.+.++|++++++ +.++++|   ||++..+.+.+... +....+.+++.||+.+.
T Consensus        15 ~~~~~v~~DlDGTLl~~-~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~~~   91 (271)
T 1vjr_A           15 DKIELFILDMDGTFYLD-DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAE   91 (271)
T ss_dssp             GGCCEEEECCBTTTEET-TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHH
T ss_pred             cCCCEEEEcCcCcEEeC-CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHHHH
Confidence            57899999999999988 55889999999999999 9999999   99988776666541 11122457888887643

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.54  E-value=8e-15  Score=114.69  Aligned_cols=55  Identities=16%  Similarity=0.132  Sum_probs=49.9

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      .+|+.+++.+++     ++++++|||    +.||++|++.+| .+++|+|+.+.+++.|++|+.+
T Consensus        85 ~~k~~~l~~~~~~~~~~~~~~~~vGD----~~nD~~~~~~ag-~~v~~~~~~~~~~~~ad~v~~~  144 (176)
T 3mmz_A           85 DRKDLALKQWCEEQGIAPERVLYVGN----DVNDLPCFALVG-WPVAVASAHDVVRGAARAVTTV  144 (176)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEECTTCCHHHHHHSSEECSS
T ss_pred             CChHHHHHHHHHHcCCCHHHEEEEcC----CHHHHHHHHHCC-CeEECCChhHHHHHhCCEEecC
Confidence            668888887775     678999999    999999999999 9999999999999999999865

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.53  E-value=3.4e-14  Score=109.15  Aligned_cols=44  Identities=20%  Similarity=0.260  Sum_probs=40.5

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      ++++++|||    +.||++|++.+| ..+++.|+.+.+++.|++++.++
T Consensus       100 ~~~~~~vGD----~~~Di~~a~~ag-~~~~~~~~~~~~~~~a~~v~~~~  143 (162)
T 2p9j_A          100 DEEIGFIGD----DVVDIEVMKKVG-FPVAVRNAVEEVRKVAVYITQRN  143 (162)
T ss_dssp             GGGEEEEEC----SGGGHHHHHHSS-EEEECTTSCHHHHHHCSEECSSC
T ss_pred             HHHEEEECC----CHHHHHHHHHCC-CeEEecCccHHHHhhCCEEecCC
Confidence            678999999    999999999999 89999999999999999988653

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.53  E-value=5.6e-16  Score=123.06  Aligned_cols=57  Identities=16%  Similarity=0.249  Sum_probs=51.3

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +.+.+|+.++..+++     ++++++|||    +.||++|++.+| .+++|+ +.+++++.|++|+.+
T Consensus       139 ~~~~~K~~~l~~~~~~lgi~~~~~~~iGD----~~~Di~~~~~ag-~~~~~~-~~~~~~~~a~~v~~~  200 (211)
T 1l7m_A          139 LKENAKGEILEKIAKIEGINLEDTVAVGD----GANDISMFKKAG-LKIAFC-AKPILKEKADICIEK  200 (211)
T ss_dssp             CSTTHHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHCS-EEEEES-CCHHHHTTCSEEECS
T ss_pred             cCCccHHHHHHHHHHHcCCCHHHEEEEec----ChhHHHHHHHCC-CEEEEC-CCHHHHhhcceeecc
Confidence            347899999999996     789999999    999999999999 999998 888999999998864

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.52  E-value=1.3e-14  Score=111.66  Aligned_cols=56  Identities=20%  Similarity=0.307  Sum_probs=48.2

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .+|..+++.+++     ++++++|||    +.||++|++.+| .+++++|+.+.+++.|++++.++
T Consensus        78 kpk~~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~~~~ag-~~~~~~~~~~~~~~~ad~v~~~~  138 (164)
T 3e8m_A           78 VDKLSAAEELCNELGINLEQVAYIGD----DLNDAKLLKRVG-IAGVPASAPFYIRRLSTIFLEKR  138 (164)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEECC----SGGGHHHHTTSS-EEECCTTSCHHHHTTCSSCCCCC
T ss_pred             CChHHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHCC-CeEEcCChHHHHHHhCcEEeccC
Confidence            456666666654     679999999    999999999999 99999999999999999998653

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.51  E-value=1e-13  Score=110.22  Aligned_cols=56  Identities=13%  Similarity=0.062  Sum_probs=50.0

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .+|+.+++.+++     ++++++|||    +.||++|++.+| .+++|+|+.+.+++.|++|+.+|
T Consensus        99 k~k~~~~~~~~~~~~~~~~~~~~vGD----~~nDi~~~~~ag-~~va~~na~~~~~~~ad~v~~~~  159 (195)
T 3n07_A           99 DDKVQAYYDICQKLAIAPEQTGYIGD----DLIDWPVMEKVA-LRVCVADGHPLLAQRANYVTHIK  159 (195)
T ss_dssp             SSHHHHHHHHHHHHCCCGGGEEEEES----SGGGHHHHTTSS-EEEECTTSCHHHHHHCSEECSSC
T ss_pred             CCcHHHHHHHHHHhCCCHHHEEEEcC----CHHHHHHHHHCC-CEEEECChHHHHHHhCCEEEcCC
Confidence            467777777775     789999999    999999999999 99999999999999999998654

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.50  E-value=4.5e-16  Score=124.64  Aligned_cols=57  Identities=11%  Similarity=-0.089  Sum_probs=50.0

Q ss_pred             CCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc----cCchhhHHHHhhhhccC
Q 038498          186 QGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV----TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       186 ~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av----~Na~~~~k~~A~~v~~~  247 (248)
                      .+.+|+.+++.+++     ++++++|||    +.||++|++.+| .++++    .|+.+.+++.|++++.+
T Consensus       148 ~~kp~~~~~~~~~~~~~i~~~~~i~iGD----~~nDi~~a~~aG-~~~~~~~~~~~~~~~~~~~a~~v~~~  213 (226)
T 1te2_A          148 YSKPHPQVYLDCAAKLGVDPLTCVALED----SVNGMIASKAAR-MRSIVVPAPEAQNDPRFVLANVKLSS  213 (226)
T ss_dssp             CCTTSTHHHHHHHHHHTSCGGGEEEEES----SHHHHHHHHHTT-CEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred             CCCCChHHHHHHHHHcCCCHHHeEEEeC----CHHHHHHHHHcC-CEEEEEcCCCCcccccccccCeEECC
Confidence            34455999999986     889999999    999999999999 99999    88888899999998864

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.50  E-value=3.6e-14  Score=112.25  Aligned_cols=56  Identities=16%  Similarity=0.213  Sum_probs=48.7

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .+|..+++.+++     ++++++|||    +.||++|++.+| .+++|+|+.+++++.|++|+.+|
T Consensus        93 ~~K~~~~~~~~~~~g~~~~~~~~vGD----~~nDi~~~~~ag-~~~~~~~~~~~~~~~ad~v~~~~  153 (189)
T 3mn1_A           93 EDKLVVLDKLLAELQLGYEQVAYLGD----DLPDLPVIRRVG-LGMAVANAASFVREHAHGITRAQ  153 (189)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEECTTSCHHHHHTSSEECSSC
T ss_pred             CChHHHHHHHHHHcCCChhHEEEECC----CHHHHHHHHHCC-CeEEeCCccHHHHHhCCEEecCC
Confidence            556666666664     678999999    999999999999 99999999999999999998653

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.49  E-value=4.4e-15  Score=119.32  Aligned_cols=63  Identities=13%  Similarity=0.006  Sum_probs=50.1

Q ss_pred             EEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCc--eEEccCchh-hH-HHHhhhhccC
Q 038498          181 FDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTV--GHTVTSPED-TM-EKCKALFLAK  247 (248)
Q Consensus       181 ~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~--~~av~Na~~-~~-k~~A~~v~~~  247 (248)
                      .+..+.+.+|+.+++.+++     ++++++|||    +.||++|++.+|+.  +++++|+.+ ++ +..|++|+++
T Consensus       135 ~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD----~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s  206 (226)
T 3mc1_A          135 SSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGD----REYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNS  206 (226)
T ss_dssp             ECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESS
T ss_pred             cCCCCCCCCCHHHHHHHHHHhCcCcccEEEECC----CHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECC
Confidence            3456788999999999997     789999999    99999999999932  556666444 33 5788888754

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.49  E-value=6.1e-16  Score=123.77  Aligned_cols=59  Identities=14%  Similarity=0.101  Sum_probs=48.6

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc----cCchhhHHHH-hhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV----TSPEDTMEKC-KALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av----~Na~~~~k~~-A~~v~~~  247 (248)
                      .+.+.+|+.+++.+++     ++++++|||    +.||++|++.+| .++++    .|+.+++++. |++|+.+
T Consensus       141 ~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD----~~nDi~~~~~aG-~~~~~~~~~~~~~~~l~~~~ad~v~~~  209 (225)
T 3d6j_A          141 VTHHKPDPEGLLLAIDRLKACPEEVLYIGD----STVDAGTAAAAG-VSFTGVTSGMTTAQEFQAYPYDRIIST  209 (225)
T ss_dssp             CSSCTTSTHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHT-CEEEEETTSSCCTTGGGGSCCSEEESS
T ss_pred             cCCCCCChHHHHHHHHHhCCChHHeEEEcC----CHHHHHHHHHCC-CeEEEECCCCCChHHHhhcCCCEEECC
Confidence            4556777888888886     889999999    999999999999 77776    6777788776 8888754

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.49  E-value=3.3e-14  Score=112.68  Aligned_cols=56  Identities=16%  Similarity=0.201  Sum_probs=48.7

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .+|+.+++.+++     ++++++|||    +.||++|++.+| .+++|+|+.+.+++.|++|+.+|
T Consensus        93 kpk~~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~~~~ag-~~~~~~~~~~~~~~~ad~v~~~~  153 (191)
T 3n1u_A           93 VDKRSAYQHLKKTLGLNDDEFAYIGD----DLPDLPLIQQVG-LGVAVSNAVPQVLEFADWRTERT  153 (191)
T ss_dssp             SSCHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEECTTCCHHHHHHSSEECSSC
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEECC----CHHHHHHHHHCC-CEEEeCCccHHHHHhCCEEecCC
Confidence            456666666664     779999999    999999999999 99999999999999999998653

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.45  E-value=1.7e-13  Score=110.31  Aligned_cols=56  Identities=13%  Similarity=0.074  Sum_probs=49.5

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .+|..+++.+++     ++++++|||    +.||++|++.+| .+++|+|+.+.+++.|++|+.+|
T Consensus       123 k~K~~~l~~~~~~lg~~~~~~~~vGD----s~nDi~~~~~ag-~~~a~~~~~~~~~~~Ad~v~~~~  183 (211)
T 3ij5_A          123 SDKLVAYHELLATLQCQPEQVAYIGD----DLIDWPVMAQVG-LSVAVADAHPLLLPKAHYVTRIK  183 (211)
T ss_dssp             SSHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHTTSS-EEEECTTSCTTTGGGSSEECSSC
T ss_pred             CChHHHHHHHHHHcCcCcceEEEEcC----CHHHHHHHHHCC-CEEEeCCccHHHHhhCCEEEeCC
Confidence            456777777765     789999999    999999999999 99999999999999999998664

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.45  E-value=9.8e-16  Score=122.48  Aligned_cols=57  Identities=4%  Similarity=-0.103  Sum_probs=49.1

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ..+..|+.+++.+++     ++++++|||    +.||++|++.+| .+++|.|+.+++| .|++|+.+
T Consensus       142 ~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD----~~nDi~~a~~aG-~~~~~~~~~~~~~-~a~~v~~~  203 (221)
T 2wf7_A          142 AASKPAPDIFIAAAHAVGVAPSESIGLED----SQAGIQAIKDSG-ALPIGVGRPEDLG-DDIVIVPD  203 (221)
T ss_dssp             SSCTTSSHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHT-CEEEEESCHHHHC-SSSEEESS
T ss_pred             CCCCCChHHHHHHHHHcCCChhHeEEEeC----CHHHHHHHHHCC-CEEEEECCHHHhc-cccchhcC
Confidence            444556668888886     889999999    999999999999 9999999999998 89988754

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.43  E-value=4.1e-15  Score=118.85  Aligned_cols=60  Identities=17%  Similarity=0.275  Sum_probs=54.6

Q ss_pred             EeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          183 VFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      ..+.+.+|..+++.+++     ++++++|||    +.||++|++.+| .+++| |+.+.+|+.|++|+.++
T Consensus       136 ~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGD----s~~Di~~a~~aG-~~~~~-~~~~~l~~~ad~v~~~~  200 (217)
T 3m1y_A          136 HMMFSHSKGEMLLVLQRLLNISKTNTLVVGD----GANDLSMFKHAH-IKIAF-NAKEVLKQHATHCINEP  200 (217)
T ss_dssp             SCCSTTHHHHHHHHHHHHHTCCSTTEEEEEC----SGGGHHHHTTCS-EEEEE-SCCHHHHTTCSEEECSS
T ss_pred             CCCCCCChHHHHHHHHHHcCCCHhHEEEEeC----CHHHHHHHHHCC-CeEEE-CccHHHHHhcceeeccc
Confidence            45578999999999986     789999999    999999999999 99999 99999999999998653

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.42  E-value=4.5e-13  Score=105.70  Aligned_cols=56  Identities=13%  Similarity=0.109  Sum_probs=47.9

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      .+|..+++.+++     ++++++|||    +.||++|++.+| .+++++|+.+++++.|++++.+|
T Consensus       100 kpk~~~~~~~~~~~g~~~~~~~~iGD----~~~Di~~a~~ag-~~~~~~~~~~~~~~~ad~v~~~~  160 (188)
T 2r8e_A          100 SNKLIAFSDLLEKLAIAPENVAYVGD----DLIDWPVMEKVG-LSVAVADAHPLLIPRADYVTRIA  160 (188)
T ss_dssp             SCSHHHHHHHHHHHTCCGGGEEEEES----SGGGHHHHTTSS-EEEECTTSCTTTGGGSSEECSSC
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHCC-CEEEecCcCHHHHhcCCEEEeCC
Confidence            456666666654     678999999    999999999999 99999999999999999998764

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.42  E-value=5.6e-15  Score=119.68  Aligned_cols=61  Identities=13%  Similarity=0.088  Sum_probs=49.5

Q ss_pred             EeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCc--eEEccC-chhhHHH-HhhhhccC
Q 038498          183 VFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTV--GHTVTS-PEDTMEK-CKALFLAK  247 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~--~~av~N-a~~~~k~-~A~~v~~~  247 (248)
                      .++.+.+|+.+++.+++     ++++++|||    +.||++|++.+|+.  ++++++ +.+++++ .|++|+.+
T Consensus       155 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~  224 (237)
T 4ex6_A          155 SVERGKPHPDMALHVARGLGIPPERCVVIGD----GVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS  224 (237)
T ss_dssp             TSSSCTTSSHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCHHHeEEEcC----CHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC
Confidence            46778899999999986     889999999    99999999999932  666664 5577777 78887753

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.40  E-value=3e-13  Score=111.05  Aligned_cols=54  Identities=30%  Similarity=0.359  Sum_probs=41.6

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhcc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGK   59 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~   59 (248)
                      +++|+|+||+||||+++...+ +.+.++++.++++ +.++++|   ||+...+.+.+..
T Consensus         5 ~~ik~i~fDlDGTLld~~~~~-~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~   62 (259)
T 2ho4_A            5 RALKAVLVDLNGTLHIEDAAV-PGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKK   62 (259)
T ss_dssp             -CCCEEEEESSSSSCC---CC-TTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             hhCCEEEEeCcCcEEeCCEeC-cCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHH
Confidence            468999999999999987665 6778999999999 9999999   6666666665543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.36  E-value=7.8e-14  Score=115.08  Aligned_cols=47  Identities=17%  Similarity=-0.007  Sum_probs=38.8

Q ss_pred             EEeeCCCCHHHHHHHhhc-----c-CCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          182 DVFPQGWDKTYCLRYLDD-----F-NEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       182 di~~~~~~K~~al~~l~~-----~-~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      +.++.+.+|+.+++.+++     + +++++|||    +.||++|++.+|+.+++|++
T Consensus       154 ~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD----~~nDi~~a~~aG~~~i~v~~  206 (267)
T 1swv_A          154 DDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGD----TVSDMKEGRNAGMWTVGVIL  206 (267)
T ss_dssp             GGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEES----SHHHHHHHHHTTSEEEEECT
T ss_pred             CccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeC----CHHHHHHHHHCCCEEEEEcC
Confidence            346778899999999986     6 89999999    99999999999953444443

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.35  E-value=3.5e-13  Score=108.66  Aligned_cols=53  Identities=17%  Similarity=0.186  Sum_probs=43.9

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHH-HHHHHHHhhc-CeEEEEcCCChHHHHHHh
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQM-LEFMRELRKV-VTVGVVGGSDLSKISEQL   57 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~-~~al~~l~~~-~~v~iaTGR~~~~~~~~l   57 (248)
                      +++|+|+||+||||+++...+.... .++++++... ..+...+|++.....+.+
T Consensus        23 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~   77 (231)
T 3kzx_A           23 KQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITL   77 (231)
T ss_dssp             CCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCCCTTSCTTTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHH
Confidence            3579999999999999988899999 9999998777 777778888876544433

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.33  E-value=5.4e-14  Score=113.01  Aligned_cols=61  Identities=5%  Similarity=-0.092  Sum_probs=51.9

Q ss_pred             EeeCC--CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh-------hHHHH-hhhhccC
Q 038498          183 VFPQG--WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED-------TMEKC-KALFLAK  247 (248)
Q Consensus       183 i~~~~--~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~-------~~k~~-A~~v~~~  247 (248)
                      .++.+  .+|+.+++.+++     ++++++|||    +.||++|++.+|+.+++|.++..       ++|+. |++|+.+
T Consensus       136 ~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD----~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~  211 (229)
T 2fdr_A          136 DLGADRVKPKPDIFLHGAAQFGVSPDRVVVVED----SVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR  211 (229)
T ss_dssp             HHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC
T ss_pred             ccccCCCCcCHHHHHHHHHHcCCChhHeEEEcC----CHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecC
Confidence            45778  899999999986     889999999    99999999999944588888765       48888 8888754

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.33  E-value=1.7e-12  Score=107.57  Aligned_cols=53  Identities=19%  Similarity=0.260  Sum_probs=49.9

Q ss_pred             CCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          188 WDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       188 ~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      .+|+.+++.+.+..++++|||    +.||++|++.+| .+++|+|+.+++++.|++++
T Consensus       193 ~~k~~~~k~~~~~~~~~~vGD----~~nDi~~~~~Ag-~~va~~~~~~~~~~~a~~~~  245 (280)
T 3skx_A          193 HEKAEKVKEVQQKYVTAMVGD----GVNDAPALAQAD-VGIAIGAGTDVAVETADIVL  245 (280)
T ss_dssp             GGHHHHHHHHHTTSCEEEEEC----TTTTHHHHHHSS-EEEECSCCSSSCCCSSSEEC
T ss_pred             HHHHHHHHHHHhcCCEEEEeC----CchhHHHHHhCC-ceEEecCCcHHHHhhCCEEE
Confidence            389999999999779999999    999999999999 99999999999999998887

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.32  E-value=8.9e-12  Score=105.46  Aligned_cols=71  Identities=20%  Similarity=0.204  Sum_probs=53.9

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhccc-cc-CCCceEEecCCcEE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGKT-VI-DEYDYVFSENGLVA   76 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~~-~~-~~~~~~i~~nGa~i   76 (248)
                      +++|+|+||+||||++.. .+.+.+.++|++|+++ ++++++|   ||+...+.+.+... +. ...+.+++.||+.+
T Consensus        19 ~~~k~i~~D~DGTL~~~~-~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~   95 (306)
T 2oyc_A           19 GRAQGVLFDCDGVLWNGE-RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAA   95 (306)
T ss_dssp             HHCSEEEECSBTTTEETT-EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEEEHHHHHH
T ss_pred             hhCCEEEECCCCcEecCC-ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEEcHHHHHH
Confidence            358999999999999764 4667899999999999 9999999   68777776665541 11 12346777777654

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.32  E-value=4.1e-14  Score=114.26  Aligned_cols=58  Identities=9%  Similarity=-0.016  Sum_probs=39.5

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ++.+..|+.+++.+++     ++++++|||    +.||+.|++.+| ..+++.|+.++++ .|++|+.+
T Consensus       142 ~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGD----s~~Di~~a~~aG-~~~~~~~~~~~~~-~ad~v~~s  204 (233)
T 3nas_A          142 LAKGKPDPDIFLTAAAMLDVSPADCAAIED----AEAGISAIKSAG-MFAVGVGQGQPML-GADLVVRQ  204 (233)
T ss_dssp             -------CCHHHHHHHHHTSCGGGEEEEEC----SHHHHHHHHHTT-CEEEECC--------CSEECSS
T ss_pred             CCCCCCChHHHHHHHHHcCCCHHHEEEEeC----CHHHHHHHHHcC-CEEEEECCccccc-cCCEEeCC
Confidence            4556666778888876     899999999    999999999999 8999999998888 88888754

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.30  E-value=9.5e-14  Score=111.73  Aligned_cols=61  Identities=11%  Similarity=0.019  Sum_probs=49.6

Q ss_pred             EeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc--c-CchhhHHHH-hhhhccC
Q 038498          183 VFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV--T-SPEDTMEKC-KALFLAK  247 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av--~-Na~~~~k~~-A~~v~~~  247 (248)
                      ..+.+.+|+.+++.+++     ++++++|||    +.||+.|++.+|+.+++|  + |+.+++++. |++|+.+
T Consensus       142 ~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD----~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~  211 (233)
T 3s6j_A          142 DVSYGKPDPDLFLAAAKKIGAPIDECLVIGD----AIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED  211 (233)
T ss_dssp             GSSCCTTSTHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS
T ss_pred             cCCCCCCChHHHHHHHHHhCCCHHHEEEEeC----CHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC
Confidence            35678888999999996     889999999    999999999999445555  3 567788876 8887754

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.29  E-value=4e-15  Score=119.88  Aligned_cols=57  Identities=7%  Similarity=-0.103  Sum_probs=44.5

Q ss_pred             CCCCHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEc---cCchhhHHHHhhhhccC
Q 038498          186 QGWDKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTV---TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       186 ~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av---~Na~~~~k~~A~~v~~~  247 (248)
                      ..-.|..+++.+++     ++++++|||    +. ||++|++.+| .++++   +|+.+++++.+++++.+
T Consensus       156 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD----~~~nDi~~a~~aG-~~~~~~~~~~~~~~~~~~~~~~~~~  221 (235)
T 2om6_A          156 SYKPRKEMFEKVLNSFEVKPEESLHIGD----TYAEDYQGARKVG-MWAVWINQEGDKVRKLEERGFEIPS  221 (235)
T ss_dssp             CCTTCHHHHHHHHHHTTCCGGGEEEEES----CTTTTHHHHHHTT-SEEEEECTTCCSCEEEETTEEEESS
T ss_pred             CCCCCHHHHHHHHHHcCCCccceEEECC----ChHHHHHHHHHCC-CEEEEECCCCCCcccCCCCcchHhh
Confidence            34567788888876     889999999    99 9999999999 88888   66555665566666543

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.26  E-value=1.2e-13  Score=109.87  Aligned_cols=65  Identities=12%  Similarity=0.062  Sum_probs=53.7

Q ss_pred             ceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhh----CCCceEEccCchhhHHHHhhhhccC
Q 038498          178 QISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFES----ERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       178 ~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~----~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ....++.+...+|+..++.+++     ++++++|||    +.||++|++.    ++ .+++++|+.+.+++.|++++++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD----~~~Di~~~~~G~~~~~-v~~~~~~~~~~~~~~ad~v~~~  210 (219)
T 3kd3_A          137 GSFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGD----GYTDYQLYEKGYATKF-IAYMEHIEREKVINLSKYVARN  210 (219)
T ss_dssp             SBEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEES----SHHHHHHHHHTSCSEE-EEECSSCCCHHHHHHCSEEESS
T ss_pred             CceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEEC----CHhHHHHHhCCCCcEE-EeccCccccHHHHhhcceeeCC
Confidence            4556678888888877777765     789999999    9999999976    44 6777888999999999999864

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.24  E-value=6.2e-13  Score=109.80  Aligned_cols=46  Identities=11%  Similarity=-0.203  Sum_probs=40.0

Q ss_pred             eeCCCCHHHHHHHhhc-----c-CCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          184 FPQGWDKTYCLRYLDD-----F-NEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~-~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++.+.+|+.+++.+++     + +++++|||    +.||+.|++.+|+.+++|..+
T Consensus       164 ~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD----~~~Di~~a~~aG~~~v~v~~g  215 (277)
T 3iru_A          164 VVRGRPFPDMALKVALELEVGHVNGCIKVDD----TLPGIEEGLRAGMWTVGVSCS  215 (277)
T ss_dssp             SSSCTTSSHHHHHHHHHHTCSCGGGEEEEES----SHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCCCCCHHHHHHHHHHcCCCCCccEEEEcC----CHHHHHHHHHCCCeEEEEecC
Confidence            6788999999999997     7 89999999    999999999999656666554

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.23  E-value=1.6e-12  Score=111.51  Aligned_cols=54  Identities=19%  Similarity=0.208  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      +.+|+.+++.+++     ++++++|||    +.||++|++.+| .+++| |+.+.+|+.|+.++.
T Consensus       243 ~kpk~~~~~~~~~~lgi~~~~~v~vGD----s~nDi~~a~~aG-~~va~-~~~~~~~~~a~~v~~  301 (335)
T 3n28_A          243 AQTKADILLTLAQQYDVEIHNTVAVGD----GANDLVMMAAAG-LGVAY-HAKPKVEAKAQTAVR  301 (335)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEEE-SCCHHHHTTSSEEES
T ss_pred             hhhhHHHHHHHHHHcCCChhhEEEEeC----CHHHHHHHHHCC-CeEEe-CCCHHHHhhCCEEEe
Confidence            4579999999986     789999999    999999999999 99999 999999999998874

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.22  E-value=6.5e-13  Score=108.41  Aligned_cols=61  Identities=10%  Similarity=0.011  Sum_probs=50.9

Q ss_pred             EEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC--------chhhH--HHHhhhhcc
Q 038498          182 DVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS--------PEDTM--EKCKALFLA  246 (248)
Q Consensus       182 di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N--------a~~~~--k~~A~~v~~  246 (248)
                      +.++.+.+|+.+++.+++     ++++++|||    +.||++|++.+| ..+++.|        +.+++  +..|++|++
T Consensus       167 ~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD----~~~Di~~a~~aG-~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~  241 (254)
T 3umc_A          167 DLFGHYKPDPQVYLGACRLLDLPPQEVMLCAA----HNYDLKAARALG-LKTAFIARPLEYGPGQSQDLAAEQDWDLIAS  241 (254)
T ss_dssp             HHHTCCTTSHHHHHHHHHHHTCCGGGEEEEES----CHHHHHHHHHTT-CEEEEECCTTTTCTTCCSSSSCSSCCSEEES
T ss_pred             cccccCCCCHHHHHHHHHHcCCChHHEEEEcC----chHhHHHHHHCC-CeEEEEecCCccCCCCCcccccCCCCcEEEC
Confidence            567889999999999997     889999999    999999999999 8888888        44444  566777664


Q ss_pred             C
Q 038498          247 K  247 (248)
Q Consensus       247 ~  247 (248)
                      +
T Consensus       242 ~  242 (254)
T 3umc_A          242 D  242 (254)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.22  E-value=2.7e-13  Score=109.23  Aligned_cols=60  Identities=7%  Similarity=-0.113  Sum_probs=48.7

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCC--ceEEccCchhhHHHHhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERT--VGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~--~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ...+..|+.+++.+++     ++++++|||    +. ||+.|++.+|+  ..++++|+.++.++.|++++.+
T Consensus       151 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD----~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~  218 (234)
T 3u26_A          151 AGFFKPHPRIFELALKKAGVKGEEAVYVGD----NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD  218 (234)
T ss_dssp             HTBCTTSHHHHHHHHHHHTCCGGGEEEEES----CTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESS
T ss_pred             cCCCCcCHHHHHHHHHHcCCCchhEEEEcC----CcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCC
Confidence            3456677888888886     889999999    97 99999999994  3555578888888888888764

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.21  E-value=2.2e-13  Score=109.90  Aligned_cols=60  Identities=10%  Similarity=-0.080  Sum_probs=46.8

Q ss_pred             eeCCCCHHHHHHHhhc------cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCc--hhhHHHHhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD------FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSP--EDTMEKCKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~------~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na--~~~~k~~A~~v~~~  247 (248)
                      ...+..|+.+++.+++      ++++++|||    +. ||+.|++.+|+.+++|.++  .+..+..|++++.+
T Consensus       154 ~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD----~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~  222 (238)
T 3ed5_A          154 TGFQKPMKEYFNYVFERIPQFSAEHTLIIGD----SLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRK  222 (238)
T ss_dssp             TTSCTTCHHHHHHHHHTSTTCCGGGEEEEES----CTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESS
T ss_pred             cCCCCCChHHHHHHHHHcCCCChhHeEEECC----CcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECC
Confidence            4567777888888875      678999999    98 9999999999556666664  66677777777654

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.21  E-value=6e-13  Score=105.59  Aligned_cols=59  Identities=14%  Similarity=0.026  Sum_probs=52.0

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ..+..|..+++.+++     ++++++|||    +.||++|++.+|+.+++|+|+.+.+++.|++|+.+
T Consensus       124 ~~~kp~~~~~~~~~~~~g~~~~~~i~iGD----~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~  187 (205)
T 3m9l_A          124 APPKPHPGGLLKLAEAWDVSPSRMVMVGD----YRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARD  187 (205)
T ss_dssp             SCCTTSSHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSS
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCC
Confidence            456677888888886     789999999    99999999999955999999999999999998854

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.20  E-value=9.1e-11  Score=96.78  Aligned_cols=68  Identities=15%  Similarity=0.181  Sum_probs=52.1

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHH---HHHH----hcccccCCCceEEecCCcEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSK---ISEQ----LGKTVIDEYDYVFSENGLVA   76 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~---~~~~----l~~~~~~~~~~~i~~nGa~i   76 (248)
                      ++|+|+||+||||+++...+ +.+.++|+.++++ +.++++|||+...   +.+.    ++.  ....+.+++.+|+.+
T Consensus         4 ~~k~v~fDlDGTL~~~~~~~-~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~--~~~~~~~~~~~~~~~   79 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYLGKEPI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI--HVPASLVYTATLATI   79 (264)
T ss_dssp             SCCEEEECCBTTTEETTEEC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCC--CCCGGGEEEHHHHHH
T ss_pred             cCCEEEEeCCCeEEeCCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCC--CCChhhEEcHHHHHH
Confidence            48999999999999987766 7889999999999 9999999998643   3333    332  222356778877754

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.20  E-value=1.8e-12  Score=105.10  Aligned_cols=62  Identities=13%  Similarity=0.045  Sum_probs=47.3

Q ss_pred             EEeeCCCCHHHHHHHhhc------cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc--cCchh-hH-HHHhhhhccC
Q 038498          182 DVFPQGWDKTYCLRYLDD------FNEIHFFGDKTYKGGNDHEIFESERTVGHTV--TSPED-TM-EKCKALFLAK  247 (248)
Q Consensus       182 di~~~~~~K~~al~~l~~------~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av--~Na~~-~~-k~~A~~v~~~  247 (248)
                      +..+.+.+|+.+++.+++      ++++++|||    +.||++|++.+|..++.|  +++.+ ++ +..|++++.+
T Consensus       160 ~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD----~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~  231 (240)
T 3sd7_A          160 NLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGD----RKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN  231 (240)
T ss_dssp             CTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEES----SHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS
T ss_pred             cccCCCCCCHHHHHHHHHHcCCCCCCcEEEECC----CHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC
Confidence            456778899999999985      568999999    999999999999444444  44433 33 5778887754

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=99.19  E-value=3.1e-11  Score=90.57  Aligned_cols=66  Identities=18%  Similarity=0.200  Sum_probs=49.3

Q ss_pred             cceEEEEecCCCCCCCCC----CCCHHHHHHHHHHhhc-CeEEEEcCCC---hHHHHHHhcccccCCCceEEecCC
Q 038498            6 QGLLALFDVDGTLTAPRK----AATPQMLEFMRELRKV-VTVGVVGGSD---LSKISEQLGKTVIDEYDYVFSENG   73 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~----~i~~~~~~al~~l~~~-~~v~iaTGR~---~~~~~~~l~~~~~~~~~~~i~~nG   73 (248)
                      .+|+|+||+||||++++.    ...+.++++|++|+++ +.++++|||+   +..+.+.+... ...+ ++|+.|+
T Consensus         2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~-gi~~-~~I~~n~   75 (142)
T 2obb_A            2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR-GLEF-YAANKDY   75 (142)
T ss_dssp             CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT-TCCC-SEESSSS
T ss_pred             CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHc-CCCe-EEEEcCC
Confidence            479999999999999753    2457889999999999 9999999998   34455544441 1223 4667665

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.19  E-value=4.5e-13  Score=105.26  Aligned_cols=50  Identities=14%  Similarity=0.085  Sum_probs=40.7

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +..+++.+++     ++++++|||    +.||++|++.+|..+++|+|+. .   .|++++.+
T Consensus       142 ~~~~~~~~~~~~~i~~~~~~~iGD----~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~~  196 (207)
T 2go7_A          142 SPEAATYLLDKYQLNSDNTYYIGD----RTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQA  196 (207)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHHTCEEEESSCCS-C---TTEEECSS
T ss_pred             CcHHHHHHHHHhCCCcccEEEECC----CHHHHHHHHHCCCeEEEEecCC-C---CCCEEeCC
Confidence            3778777775     889999999    9999999999994459999987 4   57776643

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.18  E-value=2.9e-12  Score=102.67  Aligned_cols=55  Identities=11%  Similarity=-0.086  Sum_probs=39.9

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEc------cCchhhHHHHh-hhhcc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTV------TSPEDTMEKCK-ALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av------~Na~~~~k~~A-~~v~~  246 (248)
                      -.|+.+++.+++     ++++++|||    +. ||+.|++.+|+.++.|      +++.++.+..+ ++|+.
T Consensus       157 kpk~~~~~~~~~~lgi~~~~~i~iGD----~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~  224 (234)
T 3ddh_A          157 DKTEKEYLRLLSILQIAPSELLMVGN----SFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK  224 (234)
T ss_dssp             CCSHHHHHHHHHHHTCCGGGEEEEES----CCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS
T ss_pred             CCCHHHHHHHHHHhCCCcceEEEECC----CcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc
Confidence            469999999997     899999999    96 9999999999445555      35544444444 55554

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.17  E-value=3.2e-12  Score=102.83  Aligned_cols=48  Identities=23%  Similarity=0.243  Sum_probs=36.4

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHH-hhc--CeEEEEcCCChHHH
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMREL-RKV--VTVGVVGGSDLSKI   53 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l-~~~--~~v~iaTGR~~~~~   53 (248)
                      .+|+|+||+||||+++.+.+.....++++++ ...  ..+..++||+....
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~   53 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAI   53 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHH
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCccchhhhcCCChHHH
Confidence            4799999999999999877778888888884 333  36778899998763

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.16  E-value=3.2e-12  Score=102.03  Aligned_cols=59  Identities=10%  Similarity=-0.026  Sum_probs=46.0

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc--cCc-hhhHHH-HhhhhccC
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV--TSP-EDTMEK-CKALFLAK  247 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av--~Na-~~~~k~-~A~~v~~~  247 (248)
                      +.+..|...++.+++     ++++++|||    +.||+.|.+.+|+.++++  +++ .+++++ .|++++.+
T Consensus       134 ~~~Kp~p~~~~~~~~~lg~~p~~~~~vgD----s~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~  201 (210)
T 2ah5_A          134 PEAPHKADVIHQALQTHQLAPEQAIIIGD----TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK  201 (210)
T ss_dssp             SSCCSHHHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS
T ss_pred             CCCCCChHHHHHHHHHcCCCcccEEEECC----CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC
Confidence            667889999999886     889999999    999999999999555554  454 455654 47777654

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.16  E-value=1.4e-12  Score=108.68  Aligned_cols=59  Identities=10%  Similarity=-0.033  Sum_probs=44.4

Q ss_pred             eeCCCCHHHHHHHhhc------------cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc---cCchhhHHH-HhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD------------FNEIHFFGDKTYKGGNDHEIFESERTVGHTV---TSPEDTMEK-CKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~------------~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av---~Na~~~~k~-~A~~v~~~  247 (248)
                      .+.+.+|+.+++.+++            ++++++|||    +.||++|++.+| .++++   +++.+++++ .|++|+.+
T Consensus       166 ~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GD----s~nDi~~a~~AG-~~~i~v~~~~~~~~~~~~~ad~v~~~  240 (275)
T 2qlt_A          166 VKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFED----APAGIAAGKAAG-CKIVGIATTFDLDFLKEKGCDIIVKN  240 (275)
T ss_dssp             CSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEES----SHHHHHHHHHTT-CEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred             CCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeC----CHHHHHHHHHcC-CEEEEECCCCCHHHHhhCCCCEEECC
Confidence            4667788888888764            367999999    999999999999 66555   444555554 47887753

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.16  E-value=6.3e-13  Score=108.18  Aligned_cols=60  Identities=8%  Similarity=-0.104  Sum_probs=49.2

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH----HhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK----CKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~----~A~~v~~~  247 (248)
                      ++.+..|+.+++.+++     ++++++|||    +.||+.|++.+|+.+++|.++....++    .|++|+.+
T Consensus       162 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s  230 (243)
T 3qxg_A          162 VKYGKPNPEPYLMALKKGGLKADEAVVIEN----APLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPS  230 (243)
T ss_dssp             CSSCTTSSHHHHHHHHHTTCCGGGEEEEEC----SHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESC
T ss_pred             CCCCCCChHHHHHHHHHcCCCHHHeEEEeC----CHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECC
Confidence            4677888899999986     889999999    999999999999668888887665554    47777653

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.15  E-value=9.2e-13  Score=106.95  Aligned_cols=60  Identities=8%  Similarity=-0.130  Sum_probs=49.2

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH----HhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK----CKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~----~A~~v~~~  247 (248)
                      ++.+..|+.+++.+++     ++++++|||    +.||+.|++.+|+.+++|.++....+.    .|++|+.+
T Consensus       161 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~  229 (247)
T 3dv9_A          161 VKYGKPNPEPYLMALKKGGFKPNEALVIEN----APLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHS  229 (247)
T ss_dssp             CSSCTTSSHHHHHHHHHHTCCGGGEEEEEC----SHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESS
T ss_pred             CCCCCCCCHHHHHHHHHcCCChhheEEEeC----CHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECC
Confidence            4678888999999986     889999999    999999999999777888887655444    57776643

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.14  E-value=3.4e-11  Score=94.40  Aligned_cols=55  Identities=24%  Similarity=0.225  Sum_probs=48.3

Q ss_pred             EeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          183 VFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ..|...+|+.+++.+ .++++++|||    +.||++|++.+| .+++|+|+.+    .|++++.+
T Consensus       134 ~~~~~~~k~~~l~~l-~~~~~i~iGD----~~~Di~~~~~ag-~~v~~~~~~~----~ad~v~~~  188 (201)
T 4ap9_A          134 IRLRFRDKGEFLKRF-RDGFILAMGD----GYADAKMFERAD-MGIAVGREIP----GADLLVKD  188 (201)
T ss_dssp             EECCSSCHHHHHGGG-TTSCEEEEEC----TTCCHHHHHHCS-EEEEESSCCT----TCSEEESS
T ss_pred             CcCCccCHHHHHHhc-CcCcEEEEeC----CHHHHHHHHhCC-ceEEECCCCc----cccEEEcc
Confidence            456667899999999 8999999999    999999999999 8999999987    67777643

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.14  E-value=2.5e-12  Score=105.60  Aligned_cols=61  Identities=8%  Similarity=-0.008  Sum_probs=47.1

Q ss_pred             Eee-CCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc-------hhhHHHH-hhhhccC
Q 038498          183 VFP-QGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP-------EDTMEKC-KALFLAK  247 (248)
Q Consensus       183 i~~-~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na-------~~~~k~~-A~~v~~~  247 (248)
                      ... .+..|..+++.+++     ++++++|||    +.||+.|++.+|..+++|.++       .+++++. |++++.+
T Consensus       162 ~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD----~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~  236 (259)
T 4eek_A          162 WVGGRGKPHPDLYTFAAQQLGILPERCVVIED----SVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTS  236 (259)
T ss_dssp             GGTTCCTTSSHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECS
T ss_pred             hcCcCCCCChHHHHHHHHHcCCCHHHEEEEcC----CHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCC
Confidence            345 67778889999886     889999999    999999999999556778655       4455544 7777643

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.13  E-value=4.3e-10  Score=92.94  Aligned_cols=71  Identities=17%  Similarity=0.213  Sum_probs=54.2

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChH---HHHHHhcc-cccCCCceEEecCCcEEEe
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLS---KISEQLGK-TVIDEYDYVFSENGLVAHK   78 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~---~~~~~l~~-~~~~~~~~~i~~nGa~i~~   78 (248)
                      +|+|+||+||||++.+..+ +.+.++|++++++ +.++++|||+..   .+.+.+.. .+....+.+++.||+.+..
T Consensus         1 ik~i~~D~DGtL~~~~~~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~~   76 (263)
T 1zjj_A            1 MVAIIFDMDGVLYRGNRAI-PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRLY   76 (263)
T ss_dssp             CEEEEEECBTTTEETTEEC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHHH
T ss_pred             CeEEEEeCcCceEeCCEeC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHHH
Confidence            5899999999999876655 7899999999999 999999999964   34444432 1222346789999987643

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.12  E-value=3.9e-12  Score=103.56  Aligned_cols=60  Identities=8%  Similarity=-0.044  Sum_probs=46.6

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc--h-hhHHH-HhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP--E-DTMEK-CKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na--~-~~~k~-~A~~v~~~  247 (248)
                      ++.+.+|+.++..+++     ++++++|||    +.||+.|++.+|+.+++|.++  . +++++ .|++++.+
T Consensus       161 ~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGD----s~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~  229 (240)
T 2hi0_A          161 GIRRKPAPDMTSECVKVLGVPRDKCVYIGD----SEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDT  229 (240)
T ss_dssp             TSCCTTSSHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECS
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHHHeEEEcC----CHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECC
Confidence            5678889999988886     889999999    999999999999656666543  2 45554 57776643

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.12  E-value=2.7e-14  Score=115.01  Aligned_cols=53  Identities=25%  Similarity=0.147  Sum_probs=44.8

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK   59 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~   59 (248)
                      +|+|+||+||||+++...++.....+++.+.+. ..+..+|||.+..+.+.+..
T Consensus         2 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   55 (230)
T 3vay_A            2 IKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLD   55 (230)
T ss_dssp             CCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHH
T ss_pred             eeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHH
Confidence            799999999999999877788888888888888 88888899988877766543

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.12  E-value=2.9e-12  Score=101.71  Aligned_cols=55  Identities=20%  Similarity=0.170  Sum_probs=44.4

Q ss_pred             CCCH--HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC----chhhHHHHhhhhccC
Q 038498          187 GWDK--TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS----PEDTMEKCKALFLAK  247 (248)
Q Consensus       187 ~~~K--~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N----a~~~~k~~A~~v~~~  247 (248)
                      +.+|  +.+++.+++     ++++++|||    +.||++|++.+| ..+++.|    +.+++++ |++++.+
T Consensus       135 ~~~KP~~~~~~~~~~~~~~~~~~~i~vGD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~~~~-a~~~~~~  200 (209)
T 2hdo_A          135 PKRKPDPLPLLTALEKVNVAPQNALFIGD----SVSDEQTAQAAN-VDFGLAVWGMDPNADHQK-VAHRFQK  200 (209)
T ss_dssp             SCCTTSSHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHT-CEEEEEGGGCCTTGGGSC-CSEEESS
T ss_pred             CCCCCCcHHHHHHHHHcCCCcccEEEECC----ChhhHHHHHHcC-CeEEEEcCCCCChhhhcc-CCEEeCC
Confidence            5678  888888775     889999999    999999999999 7777655    4667776 8877654

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.12  E-value=1e-12  Score=103.85  Aligned_cols=60  Identities=5%  Similarity=-0.116  Sum_probs=44.1

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc-hhhHHHHhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP-EDTMEKCKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na-~~~~k~~A~~v~~~  247 (248)
                      ...+..|+.+++.+++     ++++++|||    +.||+.|++.+|+.++.+.++ .+..+..|++++.+
T Consensus       141 ~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD----~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~  206 (214)
T 3e58_A          141 FKESKPNPEIYLTALKQLNVQASRALIIED----SEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS  206 (214)
T ss_dssp             CSSCTTSSHHHHHHHHHHTCCGGGEEEEEC----SHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS
T ss_pred             ccCCCCChHHHHHHHHHcCCChHHeEEEec----cHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH
Confidence            4556677888888886     889999999    999999999999444444433 44444666666643

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.09  E-value=1.3e-12  Score=108.90  Aligned_cols=58  Identities=10%  Similarity=0.026  Sum_probs=46.7

Q ss_pred             eeCCCCHHHHHHHhhc-----c-CCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH------Hhhhhcc
Q 038498          184 FPQGWDKTYCLRYLDD-----F-NEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK------CKALFLA  246 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~-~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~------~A~~v~~  246 (248)
                      ...+..|+.+++.+++     + +++++|||    +.||+.|++.+| .+.+|.|+.+..+.      .|+++++
T Consensus       200 ~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~~~~~~~ad~vi~  269 (282)
T 3nuq_A          200 TLVCKPHVKAFEKAMKESGLARYENAYFIDD----SGKNIETGIKLG-MKTCIHLVENEVNEILGQTPEGAIVIS  269 (282)
T ss_dssp             SCCCTTSHHHHHHHHHHHTCCCGGGEEEEES----CHHHHHHHHHHT-CSEEEEECSCCC----CCCCTTCEEES
T ss_pred             ccCCCcCHHHHHHHHHHcCCCCcccEEEEcC----CHHHHHHHHHCC-CeEEEEEcCCccccccccCCCCCEEeC
Confidence            3566789999999986     6 89999999    999999999999 88888888776554      5556654

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.08  E-value=1.2e-12  Score=107.00  Aligned_cols=61  Identities=13%  Similarity=0.005  Sum_probs=49.0

Q ss_pred             EeeCCCCHHHHHHHhhc-----c--CCEEEEcCCCCCCCCCHHHHhhCCCceEEc--cCchhhHHHHhhhhccC
Q 038498          183 VFPQGWDKTYCLRYLDD-----F--NEIHFFGDKTYKGGNDHEIFESERTVGHTV--TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-----~--~~~~aiGD~~~~~~NDi~M~~~~g~~~~av--~Na~~~~k~~A~~v~~~  247 (248)
                      .+..+..|..+++.+++     +  +++++|||    +.||+.|++.+|+.++.|  +|+.++++..|++|+++
T Consensus       166 ~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD----~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~s  235 (250)
T 3l5k_A          166 EVQHGKPDPDIFLACAKRFSPPPAMEKCLVFED----APNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNS  235 (250)
T ss_dssp             TCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEES----SHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSC
T ss_pred             hccCCCCChHHHHHHHHHcCCCCCcceEEEEeC----CHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecC
Confidence            34566778888888886     5  99999999    999999999999544444  66778889999988754

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.07  E-value=1.3e-10  Score=94.88  Aligned_cols=52  Identities=17%  Similarity=0.008  Sum_probs=39.2

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeE---EE------------EcCCChHHHHHHh
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTV---GV------------VGGSDLSKISEQL   57 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v---~i------------aTGR~~~~~~~~l   57 (248)
                      ++|+|+||+||||+++.+.+...+.++++.+.+. +.+   +.            .+||+...+.+.+
T Consensus        12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   79 (251)
T 2pke_A           12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSM   79 (251)
T ss_dssp             SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHH
T ss_pred             ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHH
Confidence            4799999999999998777888888888888877 765   22            4688776555443

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.07  E-value=7.1e-13  Score=107.84  Aligned_cols=48  Identities=8%  Similarity=-0.045  Sum_probs=41.8

Q ss_pred             EEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          181 FDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       181 ~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      .+.++.+..|+.+++.+++     ++++++|||    +.||+.|++.+| .++++.|.
T Consensus       162 ~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD----~~~Di~~a~~aG-~~~~~~~~  214 (254)
T 3umg_A          162 SDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAA----HNGDLEAAHATG-LATAFILR  214 (254)
T ss_dssp             HHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEES----CHHHHHHHHHTT-CEEEEECC
T ss_pred             cCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeC----ChHhHHHHHHCC-CEEEEEec
Confidence            3556778889999999996     889999999    999999999999 88888773

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.05  E-value=3.6e-11  Score=96.82  Aligned_cols=60  Identities=7%  Similarity=-0.028  Sum_probs=49.0

Q ss_pred             EeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCchh--hHHHHhhhhccC
Q 038498          183 VFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPED--TMEKCKALFLAK  247 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~~--~~k~~A~~v~~~  247 (248)
                      ..+.+..|+.+++.+++     ++++++|||    +. ||+.|++.+| ..+++.|...  ..+..+++++++
T Consensus       157 ~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD----~~~~Di~~a~~aG-~~~~~~~~~~~~~~~~~~d~vi~s  224 (240)
T 3qnm_A          157 DLGVLKPRPEIFHFALSATQSELRESLMIGD----SWEADITGAHGVG-MHQAFYNVTERTVFPFQPTYHIHS  224 (240)
T ss_dssp             GTTCCTTSHHHHHHHHHHTTCCGGGEEEEES----CTTTTHHHHHHTT-CEEEEECCSCCCCCSSCCSEEESS
T ss_pred             cCCCCCCCHHHHHHHHHHcCCCcccEEEECC----CchHhHHHHHHcC-CeEEEEcCCCCCCcCCCCceEECC
Confidence            34567888999999986     889999999    95 9999999999 8888888766  556667776643

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=99.04  E-value=2.6e-10  Score=84.09  Aligned_cols=69  Identities=17%  Similarity=0.231  Sum_probs=54.9

Q ss_pred             ceEEEEecCCCCCCCCC------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC
Q 038498            7 GLLALFDVDGTLTAPRK------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD   79 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~   79 (248)
                      +|+|+|||||||+++.+      .+++.+.++|++++++ +.++++|||+...                  .||+.    
T Consensus         1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~------------------~nG~~----   58 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRT------------------YEGNV----   58 (126)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTT------------------TTTCH----
T ss_pred             CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhh------------------ccccc----
Confidence            58999999999998765      4779999999999999 9999999998643                  25543    


Q ss_pred             CcEEEEeecccccchHHHHHHHHHHHHh
Q 038498           80 GKLIGTQSLKSFLGGEKLKEFINFTLHY  107 (248)
Q Consensus        80 ~~~i~~~~~~~~i~~~~~~~i~~~~~~~  107 (248)
                            ..    ++.+.++++++.+.++
T Consensus        59 ------~~----~~~~~~~~i~~~~~~~   76 (126)
T 1xpj_A           59 ------GK----INIHTLPIITEWLDKH   76 (126)
T ss_dssp             ------HH----HHHHTHHHHHHHHHHT
T ss_pred             ------cc----cCHHHHHHHHHHHHHc
Confidence                  12    3466778888888775

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.03  E-value=8.7e-09  Score=82.82  Aligned_cols=37  Identities=22%  Similarity=0.348  Sum_probs=33.6

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhh
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKA  242 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~  242 (248)
                      ++++++|||    +.||++|++.+| .+++| |+.+.+++.|+
T Consensus       178 ~~~~~~vGD----s~~D~~~~~~ag-~~~~~-~~~~~l~~~a~  214 (232)
T 3fvv_A          178 FAESYFYSD----SVNDVPLLEAVT-RPIAA-NPSPGLREIAQ  214 (232)
T ss_dssp             SSEEEEEEC----CGGGHHHHHHSS-EEEEE-SCCHHHHHHHH
T ss_pred             hhheEEEeC----CHhhHHHHHhCC-CeEEE-CcCHHHHHHHH
Confidence            778999999    999999999999 99988 88888888875

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.01  E-value=9e-10  Score=85.45  Aligned_cols=43  Identities=23%  Similarity=0.285  Sum_probs=38.2

Q ss_pred             ceEEEEecCCCCCCCCC---------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            7 GLLALFDVDGTLTAPRK---------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~---------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      +|+++||+||||+....         .+.+.+.++|++|+++ ++++++|+++
T Consensus         1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~   53 (179)
T 3l8h_A            1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQS   53 (179)
T ss_dssp             CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred             CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCC
Confidence            58999999999997643         4678899999999999 9999999997

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.00  E-value=1e-09  Score=87.78  Aligned_cols=46  Identities=26%  Similarity=0.307  Sum_probs=40.2

Q ss_pred             ccceEEEEecCCCCCCCC--------CCCCHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498            5 KQGLLALFDVDGTLTAPR--------KAATPQMLEFMRELRKV-VTVGVVGGSDL   50 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~--------~~i~~~~~~al~~l~~~-~~v~iaTGR~~   50 (248)
                      +++|+++||+||||+...        ..+.+.+.++|++|+++ ++++++|+++.
T Consensus        23 ~~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~   77 (211)
T 2gmw_A           23 KSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSG   77 (211)
T ss_dssp             -CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred             hcCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCC
Confidence            357899999999999875        35678899999999999 99999999984

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.95  E-value=1.1e-09  Score=96.56  Aligned_cols=55  Identities=18%  Similarity=0.312  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +..|...++.+++     ++++++|||    +.||++|++.+| .++++ |+.+.+++.|++++..
T Consensus       321 ~kpk~~~~~~~~~~~gi~~~~~i~vGD----~~~Di~~a~~aG-~~va~-~~~~~~~~~ad~~i~~  380 (415)
T 3p96_A          321 RAGKATALREFAQRAGVPMAQTVAVGD----GANDIDMLAAAG-LGIAF-NAKPALREVADASLSH  380 (415)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEEE-SCCHHHHHHCSEEECS
T ss_pred             CcchHHHHHHHHHHcCcChhhEEEEEC----CHHHHHHHHHCC-CeEEE-CCCHHHHHhCCEEEcc
Confidence            4578888988886     789999999    999999999999 99999 9999999999998754

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.91  E-value=4.3e-09  Score=88.17  Aligned_cols=53  Identities=25%  Similarity=0.327  Sum_probs=46.6

Q ss_pred             CCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          188 WDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       188 ~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      .+|..+++.+...+++++|||    +.||++|++.+| .+++++|+.+..+..|++++
T Consensus       212 ~~K~~~~~~l~~~~~~~~vGD----s~~Di~~a~~ag-~~v~~~~~~~~~~~~ad~v~  264 (287)
T 3a1c_A          212 HQKSEEVKKLQAKEVVAFVGD----GINDAPALAQAD-LGIAVGSGSDVAVESGDIVL  264 (287)
T ss_dssp             TCHHHHHHHHTTTCCEEEEEC----TTTCHHHHHHSS-EEEEECCCSCCSSCCSSEEE
T ss_pred             HHHHHHHHHHhcCCeEEEEEC----CHHHHHHHHHCC-eeEEeCCCCHHHHhhCCEEE
Confidence            489999999874488999999    999999999999 89999998877777777776

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=98.91  E-value=2e-10  Score=89.42  Aligned_cols=53  Identities=11%  Similarity=0.004  Sum_probs=45.7

Q ss_pred             eeCCCCHHHHHHHhhc----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhh
Q 038498          184 FPQGWDKTYCLRYLDD----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKA  242 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~  242 (248)
                      .+.+.+|+.+++.+++    . ++++|||    +.||++|++.+| ..+++.|+...+++..+
T Consensus       133 ~~~~kp~~~~~~~~~~~~~~~-~~~~iGD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~l~  189 (190)
T 2fi1_A          133 GFKRKPNPESMLYLREKYQIS-SGLVIGD----RPIDIEAGQAAG-LDTHLFTSIVNLRQVLD  189 (190)
T ss_dssp             CCCCTTSCHHHHHHHHHTTCS-SEEEEES----SHHHHHHHHHTT-CEEEECSCHHHHHHHHT
T ss_pred             cCCCCCCHHHHHHHHHHcCCC-eEEEEcC----CHHHHHHHHHcC-CeEEEECCCCChhhccC
Confidence            4567788999999987    5 9999999    999999999999 88888888888887765

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.89  E-value=6.9e-12  Score=100.60  Aligned_cols=59  Identities=10%  Similarity=-0.104  Sum_probs=49.3

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc----cCchhhHHHHhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV----TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av----~Na~~~~k~~A~~v~~~  247 (248)
                      .+.+..|+.+++.+++     ++++++|||    +.||+.|++.+| ..+++    +|+.+.++..|++++.+
T Consensus       148 ~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (230)
T 3um9_A          148 VRLFKPHQKVYELAMDTLHLGESEILFVSC----NSWDATGAKYFG-YPVCWINRSNGVFDQLGVVPDIVVSD  215 (230)
T ss_dssp             TTCCTTCHHHHHHHHHHHTCCGGGEEEEES----CHHHHHHHHHHT-CCEEEECTTSCCCCCSSCCCSEEESS
T ss_pred             cccCCCChHHHHHHHHHhCCCcccEEEEeC----CHHHHHHHHHCC-CEEEEEeCCCCccccccCCCcEEeCC
Confidence            4567778999999986     889999999    999999999999 87887    77777777777777643

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=98.87  E-value=1.2e-08  Score=99.53  Aligned_cols=54  Identities=17%  Similarity=0.220  Sum_probs=49.6

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~~  246 (248)
                      .+|...++.+.+ .+.+++|||    +.||.+||+.|| .||||+ |+.+.+|++|++|+.
T Consensus       706 ~~K~~iv~~lq~~g~~V~a~GD----G~ND~~mLk~A~-vGIAMg~ng~d~aK~aAD~Vl~  761 (1034)
T 3ixz_A          706 QQKLVIVESCQRLGAIVAVTGD----GVNDSPALKKAD-IGVAMGIAGSDAAKNAADMILL  761 (1034)
T ss_pred             HHHHHHHHHHHHcCCEEEEECC----cHHhHHHHHHCC-eeEEeCCccCHHHHHhcCEEec
Confidence            479999988887 556999999    999999999999 999999 999999999999984

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=98.86  E-value=9e-11  Score=95.26  Aligned_cols=60  Identities=7%  Similarity=-0.186  Sum_probs=42.6

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccC--chhhHHH---HhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTS--PEDTMEK---CKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~N--a~~~~k~---~A~~v~~~  247 (248)
                      +..+..|..+++.+++     ++++++|||    +. ||+.|++.+|+..+.+..  ..+...+   .|+++..+
T Consensus       146 ~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD----~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~  216 (241)
T 2hoq_A          146 EGVKKPHPKIFKKALKAFNVKPEEALMVGD----RLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDN  216 (241)
T ss_dssp             GTCCTTCHHHHHHHHHHHTCCGGGEEEEES----CTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESS
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccEEEECC----CchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECC
Confidence            4556677788888875     889999999    98 999999999955556543  3333332   45655543

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=98.84  E-value=5.2e-11  Score=97.19  Aligned_cols=57  Identities=18%  Similarity=0.032  Sum_probs=40.9

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc----hhhHHHHhhhhccC
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP----EDTMEKCKALFLAK  247 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na----~~~~k~~A~~v~~~  247 (248)
                      ...|+.+++.+++     ++++++|||    +.||++|++.+|+..++|.++    .+..+..|++++.+
T Consensus       169 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~  234 (243)
T 2hsz_A          169 IKPHPAPFYYLCGKFGLYPKQILFVGD----SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD  234 (243)
T ss_dssp             CTTSSHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS
T ss_pred             CCcCHHHHHHHHHHhCcChhhEEEEcC----CHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC
Confidence            3345667777765     789999999    999999999999555766653    33345566666543

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.84  E-value=5.3e-09  Score=82.65  Aligned_cols=56  Identities=14%  Similarity=0.155  Sum_probs=48.5

Q ss_pred             EeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhh
Q 038498          183 VFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF  244 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v  244 (248)
                      ..|+...|..+++.+.. ++++++|||    +.||++|++.+| .++++ |+.+.+++.+..+
T Consensus       127 ~~p~p~~~~~~l~~l~~~~~~~~~iGD----~~~Di~~a~~aG-~~~~~-~~~~~~~~~~~~~  183 (206)
T 1rku_A          127 QLRQKDPKRQSVIAFKSLYYRVIAAGD----SYNDTTMLSEAH-AGILF-HAPENVIREFPQF  183 (206)
T ss_dssp             ECCSSSHHHHHHHHHHHTTCEEEEEEC----SSTTHHHHHHSS-EEEEE-SCCHHHHHHCTTS
T ss_pred             ecCCCchHHHHHHHHHhcCCEEEEEeC----ChhhHHHHHhcC-ccEEE-CCcHHHHHHHhhh
Confidence            35888999999999975 889999999    999999999999 88887 6777888777654

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.79  E-value=9.2e-12  Score=100.19  Aligned_cols=59  Identities=10%  Similarity=-0.060  Sum_probs=49.1

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc----cCchhhHHHHhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV----TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av----~Na~~~~k~~A~~v~~~  247 (248)
                      ...+..|..+++.+++     ++++++|||    +.||+.|++.+| ..+++    +|+.++++..|++++.+
T Consensus       151 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~a~~~G-~~~~~v~~~~~~~~~~~~~~~~v~~~  218 (233)
T 3umb_A          151 VRLYKTAPAAYALAPRAFGVPAAQILFVSS----NGWDACGATWHG-FTTFWINRLGHPPEALDVAPAAAGHD  218 (233)
T ss_dssp             TTCCTTSHHHHTHHHHHHTSCGGGEEEEES----CHHHHHHHHHHT-CEEEEECTTCCCCCSSSCCCSEEESS
T ss_pred             cCCCCcCHHHHHHHHHHhCCCcccEEEEeC----CHHHHHHHHHcC-CEEEEEcCCCCCchhccCCCCEEECC
Confidence            3455666778888875     889999999    999999999999 88888    88888888888887754

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=98.78  E-value=7.4e-10  Score=88.87  Aligned_cols=43  Identities=7%  Similarity=-0.071  Sum_probs=33.2

Q ss_pred             cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch-----------hhHHHHhhhhccC
Q 038498          200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE-----------DTMEKCKALFLAK  247 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~-----------~~~k~~A~~v~~~  247 (248)
                      ++++++|||    +. ||+.|++.+| ..+++.|+.           +..+..|++++++
T Consensus       172 ~~~~~~vGD----~~~~Di~~a~~aG-~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~  226 (240)
T 3smv_A          172 KKDILHTAE----SLYHDHIPANDAG-LVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS  226 (240)
T ss_dssp             GGGEEEEES----CTTTTHHHHHHHT-CEEEEECTTCC-------CCCSSCCCCSEEESS
T ss_pred             chhEEEECC----CchhhhHHHHHcC-CeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC
Confidence            899999999    96 9999999999 888885543           3334666666643

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.77  E-value=5.1e-09  Score=97.28  Aligned_cols=54  Identities=24%  Similarity=0.316  Sum_probs=50.3

Q ss_pred             CCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      .+|..+++.+++.++++++||    +.||.+|++.+| .|++|+|+.+.+|+.||+|+.
T Consensus       506 ~~K~~~v~~l~~~~~v~~vGD----g~ND~~al~~A~-vgiamg~g~~~a~~~AD~vl~  559 (645)
T 3j08_A          506 HQKSEEVKKLQAKEVVAFVGD----GINDAPALAQAD-LGIAVGSGSDVAVESGDIVLI  559 (645)
T ss_dssp             TCHHHHHHHHTTTCCEEEEEC----SSSCHHHHHHSS-EEEEECCCSCCSSCCSSSEES
T ss_pred             HhHHHHHHHHhhCCeEEEEeC----CHhHHHHHHhCC-EEEEeCCCcHHHHHhCCEEEe
Confidence            388999999987788999999    999999999999 999999999999999999983

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.73  E-value=4.2e-08  Score=83.44  Aligned_cols=53  Identities=21%  Similarity=0.196  Sum_probs=47.2

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      -.|..+++.+++     ++++++|||    +.||++|++.+| .++++ |+.+.+++.|+.+..
T Consensus       245 kpkp~~~~~~~~~lgv~~~~~i~VGD----s~~Di~aa~~AG-~~va~-~~~~~~~~~a~~~i~  302 (317)
T 4eze_A          245 ANKKQTLVDLAARLNIATENIIACGD----GANDLPMLEHAG-TGIAW-KAKPVVREKIHHQIN  302 (317)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEEE-SCCHHHHHHCCEEES
T ss_pred             CCCHHHHHHHHHHcCCCcceEEEEeC----CHHHHHHHHHCC-CeEEe-CCCHHHHHhcCeeeC
Confidence            467888888875     789999999    999999999999 99999 899999999988764

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=98.72  E-value=1.2e-10  Score=93.58  Aligned_cols=45  Identities=11%  Similarity=-0.121  Sum_probs=36.6

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ..+-+|+.+++.+++     ++++++|||    +.||+.|++.+|+.+++|.++
T Consensus       136 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~a~~aG~~~i~v~~g  185 (222)
T 2nyv_A          136 GEKKPSPTPVLKTLEILGEEPEKALIVGD----TDADIEAGKRAGTKTALALWG  185 (222)
T ss_dssp             CTTCCTTHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHHTCEEEEETTS
T ss_pred             CCCCCChHHHHHHHHHhCCCchhEEEECC----CHHHHHHHHHCCCeEEEEcCC
Confidence            344578888888875     789999999    999999999999555777653

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.71  E-value=1.1e-08  Score=96.17  Aligned_cols=53  Identities=25%  Similarity=0.327  Sum_probs=49.8

Q ss_pred             CHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          189 DKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       189 ~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      +|...++.+++.+.++++||    +.||.+|++.++ .|+||+|+.+.+|+.||+|+.
T Consensus       585 ~K~~~v~~l~~~~~v~~vGD----g~ND~~al~~A~-vgiamg~g~~~a~~~AD~vl~  637 (723)
T 3j09_A          585 QKSEEVKKLQAKEVVAFVGD----GINDAPALAQAD-LGIAVGSGSDVAVESGDIVLI  637 (723)
T ss_dssp             CHHHHHHHHTTTCCEEEEEC----SSTTHHHHHHSS-EEEECCCCSCCSSCCSSEECS
T ss_pred             HHHHHHHHHhcCCeEEEEEC----ChhhHHHHhhCC-EEEEeCCCcHHHHHhCCEEEe
Confidence            78889999887788999999    999999999999 999999999999999999984

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=98.69  E-value=2.9e-11  Score=95.93  Aligned_cols=52  Identities=10%  Similarity=-0.073  Sum_probs=42.7

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL  243 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~  243 (248)
                      +-.+...++.+++     ++++++|||    +.||+.|++.+| ..+++.|+.+++++....
T Consensus       149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~l~~  205 (211)
T 2i6x_A          149 YKPNEDIFLEMIADSGMKPEETLFIDD----GPANVATAERLG-FHTYCPDNGENWIPAITR  205 (211)
T ss_dssp             CTTSHHHHHHHHHHHCCCGGGEEEECS----CHHHHHHHHHTT-CEEECCCTTCCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCChHHeEEeCC----CHHHHHHHHHcC-CEEEEECCHHHHHHHHHH
Confidence            4445567777775     889999999    999999999999 889999988888776543

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.62  E-value=5e-10  Score=90.68  Aligned_cols=59  Identities=10%  Similarity=-0.075  Sum_probs=42.1

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC--chhhHHHHh-hhhcc
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS--PEDTMEKCK-ALFLA  246 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N--a~~~~k~~A-~~v~~  246 (248)
                      ...+..|..+++.+++     ++++++|||    +.||+.|++.+|+.++.+..  ..+.++..| ++++.
T Consensus       157 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD----~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~  223 (240)
T 2no4_A          157 LKIYKPDPRIYQFACDRLGVNPNEVCFVSS----NAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVN  223 (240)
T ss_dssp             TTCCTTSHHHHHHHHHHHTCCGGGEEEEES----CHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEES
T ss_pred             cCCCCCCHHHHHHHHHHcCCCcccEEEEeC----CHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeC
Confidence            4456677888888875     889999999    99999999999955555543  333344445 55543

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=98.61  E-value=1.8e-09  Score=88.99  Aligned_cols=59  Identities=8%  Similarity=-0.121  Sum_probs=43.3

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCchhhHHH------HhhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPEDTMEK------CKALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~~~~k~------~A~~v~~~  247 (248)
                      ...+-.+...++.+++     ++++++|||    +. ||+.|.+.+| ..+++.|.....+.      .|++++.+
T Consensus       157 ~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD----~~~~Di~~a~~aG-~~~i~~~~~~~~~~~~~~~~~ad~v~~~  227 (263)
T 3k1z_A          157 AGWPKPDPRIFQEALRLAHMEPVVAAHVGD----NYLCDYQGPRAVG-MHSFLVVGPQALDPVVRDSVPKEHILPS  227 (263)
T ss_dssp             HSSCTTSHHHHHHHHHHHTCCGGGEEEEES----CHHHHTHHHHTTT-CEEEEECCSSCCCHHHHHHSCGGGEESS
T ss_pred             cCCCCCCHHHHHHHHHHcCCCHHHEEEECC----CcHHHHHHHHHCC-CEEEEEcCCCCCchhhcccCCCceEeCC
Confidence            3455667777877775     889999999    96 9999999999 66777665543322      46766643

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.60  E-value=3.1e-08  Score=79.38  Aligned_cols=47  Identities=23%  Similarity=0.251  Sum_probs=40.9

Q ss_pred             ccceEEEEecCCCCCCC--------CCCCCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            5 KQGLLALFDVDGTLTAP--------RKAATPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~--------~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      ..+|++++|+||||+..        ...+.+.+.++|++|+++ ++++++|+++..
T Consensus        29 ~~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~   84 (218)
T 2o2x_A           29 PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGI   84 (218)
T ss_dssp             SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHH
T ss_pred             hcCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCC
Confidence            35799999999999987        356788999999999999 999999999653

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.60  E-value=8e-10  Score=90.41  Aligned_cols=46  Identities=9%  Similarity=-0.057  Sum_probs=38.6

Q ss_pred             EeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          183 VFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       183 i~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ....+..|..+++.+++     ++++++|||    +.||+.|++.+| ..+++.|+
T Consensus       142 ~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~a~~aG-~~~~~~~~  192 (253)
T 1qq5_A          142 AKRVFKPHPDSYALVEEVLGVTPAEVLFVSS----NGFDVGGAKNFG-FSVARVAR  192 (253)
T ss_dssp             GGTCCTTSHHHHHHHHHHHCCCGGGEEEEES----CHHHHHHHHHHT-CEEEEECC
T ss_pred             ccCCCCCCHHHHHHHHHHcCCCHHHEEEEeC----ChhhHHHHHHCC-CEEEEECC
Confidence            34567778888888886     789999999    999999999999 77777666

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=98.59  E-value=2.8e-08  Score=77.83  Aligned_cols=45  Identities=7%  Similarity=-0.137  Sum_probs=33.4

Q ss_pred             CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh
Q 038498          187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED  235 (248)
Q Consensus       187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~  235 (248)
                      +..+...++.+++     ++++++|||    +.||++|++.+|+.++.+.+...
T Consensus       140 ~Kp~~~~~~~~~~~~~~~~~~~~~vgD----~~~Di~~a~~aG~~~~~~~~~~~  189 (200)
T 3cnh_A          140 MKPNPAMYRLGLTLAQVRPEEAVMVDD----RLQNVQAARAVGMHAVQCVDAAQ  189 (200)
T ss_dssp             CTTCHHHHHHHHHHHTCCGGGEEEEES----CHHHHHHHHHTTCEEEECSCHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHHHeEEeCC----CHHHHHHHHHCCCEEEEECCchh
Confidence            4445567777765     889999999    99999999999944444544433

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.58  E-value=4.8e-10  Score=90.15  Aligned_cols=58  Identities=7%  Similarity=-0.105  Sum_probs=42.5

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc----cCchhhHHHHhhhhcc
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV----TSPEDTMEKCKALFLA  246 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av----~Na~~~~k~~A~~v~~  246 (248)
                      ...+..|..+++.+++     ++++++|||    +.||+.|++.+| ..+++    .|+.+.++..|++++.
T Consensus       147 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~~~~~~~~~~~  213 (232)
T 1zrn_A          147 VQVYKPDNRVYELAEQALGLDRSAILFVAS----NAWDATGARYFG-FPTCWINRTGNVFEEMGQTPDWEVT  213 (232)
T ss_dssp             GTCCTTSHHHHHHHHHHHTSCGGGEEEEES----CHHHHHHHHHHT-CCEEEECTTCCCCCSSSCCCSEEES
T ss_pred             cCCCCCCHHHHHHHHHHcCCCcccEEEEeC----CHHHHHHHHHcC-CEEEEEcCCCCCccccCCCCCEEEC
Confidence            3456677778888775     889999999    999999999999 66555    3444455555565543

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.52  E-value=4.5e-09  Score=84.50  Aligned_cols=46  Identities=7%  Similarity=0.125  Sum_probs=38.3

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHH
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC  240 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~  240 (248)
                      +....+.+++     ++++++|||    +.||+.|.+.+| ..+++.|+.+++++.
T Consensus       175 ~~~~~~~~~~~~g~~~~~~~~vGD----~~~Di~~a~~aG-~~~i~v~~~~~~k~~  225 (229)
T 4dcc_A          175 EPEIFKAVTEDAGIDPKETFFIDD----SEINCKVAQELG-ISTYTPKAGEDWSHL  225 (229)
T ss_dssp             CHHHHHHHHHHHTCCGGGEEEECS----CHHHHHHHHHTT-CEEECCCTTCCGGGG
T ss_pred             CHHHHHHHHHHcCCCHHHeEEECC----CHHHHHHHHHcC-CEEEEECCHHHHHHH
Confidence            3467777765     889999999    999999999999 888888887777654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.51  E-value=1.5e-07  Score=73.59  Aligned_cols=53  Identities=23%  Similarity=0.302  Sum_probs=43.0

Q ss_pred             cceEEEEecCCCCCC------------------------CCCCCCHHHHHHHHHHhhc-CeEEEEcCCC-hHHHHHHhc
Q 038498            6 QGLLALFDVDGTLTA------------------------PRKAATPQMLEFMRELRKV-VTVGVVGGSD-LSKISEQLG   58 (248)
Q Consensus         6 ~~kli~~DlDGTLl~------------------------~~~~i~~~~~~al~~l~~~-~~v~iaTGR~-~~~~~~~l~   58 (248)
                      ++|+|+||+||||++                        ....+.+.+.++|++|+++ ++++++||++ ...+...+.
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~  104 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLE  104 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHH
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHH
Confidence            479999999999993                        2235788899999999999 9999999998 565444443

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.49  E-value=4.2e-08  Score=81.02  Aligned_cols=46  Identities=15%  Similarity=0.263  Sum_probs=41.6

Q ss_pred             ccceEEEEecCCCCCCCC-------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498            5 KQGLLALFDVDGTLTAPR-------------------------KAATPQMLEFMRELRKV-VTVGVVGGSDL   50 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~-------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR~~   50 (248)
                      .++++|+|||||||+++.                         ..+.+.+.++|+.|+++ ++++++|||+.
T Consensus        57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~  128 (258)
T 2i33_A           57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKT  128 (258)
T ss_dssp             SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEG
T ss_pred             CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCch
Confidence            578999999999999884                         56788999999999999 99999999994

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=98.48  E-value=5.4e-09  Score=83.12  Aligned_cols=51  Identities=12%  Similarity=0.047  Sum_probs=35.3

Q ss_pred             CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceE-EccC---chhhHHHHhhh
Q 038498          189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGH-TVTS---PEDTMEKCKAL  243 (248)
Q Consensus       189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~-av~N---a~~~~k~~A~~  243 (248)
                      .+....+..++     ++++++|||    +.+|+.+.+.+|+.++ ++.+   ..+.+++....
T Consensus       141 P~p~~~~~a~~~lg~~p~e~l~VgD----s~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~  200 (216)
T 3kbb_A          141 PDPEIYLLVLERLNVVPEKVVVFED----SKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAV  200 (216)
T ss_dssp             TSTHHHHHHHHHHTCCGGGEEEEEC----SHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCS
T ss_pred             ccHHHHHHHHHhhCCCccceEEEec----CHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCc
Confidence            33445555554     899999999    9999999999996665 3443   34555555433

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.46  E-value=9e-09  Score=80.96  Aligned_cols=54  Identities=9%  Similarity=0.044  Sum_probs=38.1

Q ss_pred             CCHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc----cCchhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHTV----TSPEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av----~Na~~~~k~~A~~v~~  246 (248)
                      -.|..+++.+++   ++++++|||    +.||+.|.+.+| ..+++    +|+.+.++..|++++.
T Consensus       128 Kp~~~~~~~~~~~~~~~~~~~vGD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~~~~~~~~~~~  188 (201)
T 2w43_A          128 KPSPKVYKYFLDSIGAKEAFLVSS----NAFDVIGAKNAG-MRSIFVNRKNTIVDPIGGKPDVIVN  188 (201)
T ss_dssp             TTCHHHHHHHHHHHTCSCCEEEES----CHHHHHHHHHTT-CEEEEECSSSCCCCTTSCCCSEEES
T ss_pred             CCCHHHHHHHHHhcCCCcEEEEeC----CHHHhHHHHHCC-CEEEEECCCCCCccccCCCCCEEEC
Confidence            344777777665   789999999    999999999999 55544    4444444444555543

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.36  E-value=6.3e-07  Score=70.77  Aligned_cols=64  Identities=14%  Similarity=0.131  Sum_probs=48.2

Q ss_pred             ccceEEEEecCCCCCCCCC-------------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEe
Q 038498            5 KQGLLALFDVDGTLTAPRK-------------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFS   70 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~-------------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~   70 (248)
                      ..+|+|+||+||||++...             .+-+.+.++|+.|+++ ++++++||++...+.+.++.    .++.+++
T Consensus         4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~~----~~d~v~~   79 (196)
T 2oda_A            4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAP----VNDWMIA   79 (196)
T ss_dssp             -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHTT----TTTTCEE
T ss_pred             CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcCc----cCCEEEE
Confidence            3679999999999998431             3457889999999999 99999999998776554441    2455655


Q ss_pred             cC
Q 038498           71 EN   72 (248)
Q Consensus        71 ~n   72 (248)
                      .+
T Consensus        80 ~~   81 (196)
T 2oda_A           80 AP   81 (196)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.32  E-value=3.9e-08  Score=80.37  Aligned_cols=41  Identities=15%  Similarity=0.049  Sum_probs=33.7

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      ++++++|||    +.+|+.+.+.+|+.+++|++..+.  +.|+++..
T Consensus       187 p~e~l~VGD----s~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi~  227 (250)
T 4gib_A          187 PQNCIGIED----ASAGIDAINSANMFSVGVGNYENL--KKANLVVD  227 (250)
T ss_dssp             GGGEEEEES----SHHHHHHHHHTTCEEEEESCTTTT--TTSSEEES
T ss_pred             hHHeEEECC----CHHHHHHHHHcCCEEEEECChhHh--ccCCEEEC
Confidence            899999999    999999999999889999876542  23666654

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.30  E-value=4.2e-07  Score=66.55  Aligned_cols=48  Identities=10%  Similarity=0.037  Sum_probs=39.8

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHH
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKIS   54 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~   54 (248)
                      ++|+|+||+||||.+ ...+.+.+.++|++|+++ ++++++|+++...+.
T Consensus         1 ~~k~i~~D~DgtL~~-~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~   49 (137)
T 2pr7_A            1 GMRGLIVDYAGVLDG-TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGA   49 (137)
T ss_dssp             CCCEEEECSTTTTSS-CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGG
T ss_pred             CCcEEEEeccceecC-CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence            368999999999943 344678899999999999 999999999876543

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.22  E-value=7.8e-07  Score=73.92  Aligned_cols=54  Identities=15%  Similarity=0.141  Sum_probs=45.0

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhcc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGK   59 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~~   59 (248)
                      .++|+|+||+||||++... +.+.+.++|++++++ +.++++||   |+...+.+.+..
T Consensus        12 ~~~k~i~~D~DGtL~~~~~-~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~   69 (284)
T 2hx1_A           12 PKYKCIFFDAFGVLKTYNG-LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHK   69 (284)
T ss_dssp             GGCSEEEECSBTTTEETTE-ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred             hcCCEEEEcCcCCcCcCCe-eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHH
Confidence            4689999999999998755 557889999999999 99999996   777766665554

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.18  E-value=1.1e-06  Score=82.62  Aligned_cols=80  Identities=16%  Similarity=0.211  Sum_probs=61.6

Q ss_pred             ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +.........+.++++--        ..+.++.|  -+|...++.|.+ .+.++++||    +.||.+||+.++ .|+||
T Consensus       577 TGd~~~~a~~ia~~lgi~--------~v~a~~~P--~~K~~~v~~l~~~g~~V~~vGD----G~ND~paL~~Ad-vGIAm  641 (736)
T 3rfu_A          577 TGDSKRTAEAVAGTLGIK--------KVVAEIMP--EDKSRIVSELKDKGLIVAMAGD----GVNDAPALAKAD-IGIAM  641 (736)
T ss_dssp             CSSCHHHHHHHHHHHTCC--------CEECSCCH--HHHHHHHHHHHHHSCCEEEEEC----SSTTHHHHHHSS-EEEEE
T ss_pred             CCCCHHHHHHHHHHcCCC--------EEEEecCH--HHHHHHHHHHHhcCCEEEEEEC----ChHhHHHHHhCC-EEEEe
Confidence            344444455555555410        11223444  469999999987 778999999    999999999999 99999


Q ss_pred             cCchhhHHHHhhhhcc
Q 038498          231 TSPEDTMEKCKALFLA  246 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~~  246 (248)
                      +|+.+.+|+.|++|+.
T Consensus       642 g~g~d~a~~~AD~vl~  657 (736)
T 3rfu_A          642 GTGTDVAIESAGVTLL  657 (736)
T ss_dssp             SSSCSHHHHHCSEEEC
T ss_pred             CCccHHHHHhCCEEEc
Confidence            9999999999999984

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.15  E-value=3.7e-06  Score=65.64  Aligned_cols=45  Identities=9%  Similarity=0.167  Sum_probs=37.9

Q ss_pred             cceEEEEecCCCCCCCC--------------CCCCHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498            6 QGLLALFDVDGTLTAPR--------------KAATPQMLEFMRELRKV-VTVGVVGGSDL   50 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-~~v~iaTGR~~   50 (248)
                      ++|+|+||+||||+...              -.+.+.+.++|++|+++ ++++++|+++.
T Consensus         2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~   61 (189)
T 3ib6_A            2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTAT   61 (189)
T ss_dssp             -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCc
Confidence            58999999999997632              24577889999999999 99999999875

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=98.07  E-value=2.5e-07  Score=75.29  Aligned_cols=30  Identities=3%  Similarity=-0.100  Sum_probs=28.2

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      +++|++|||    +.+|+.+.+.+|+.+|+|.++
T Consensus       166 p~e~l~VgD----s~~di~aA~~aG~~~I~V~~g  195 (243)
T 4g9b_A          166 PQACIGIED----AQAGIDAINASGMRSVGIGAG  195 (243)
T ss_dssp             GGGEEEEES----SHHHHHHHHHHTCEEEEESTT
T ss_pred             hHHEEEEcC----CHHHHHHHHHcCCEEEEECCC
Confidence            899999999    999999999999999999864

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.02  E-value=1.3e-07  Score=76.13  Aligned_cols=55  Identities=7%  Similarity=-0.061  Sum_probs=36.9

Q ss_pred             CCHHHHHHHhhc---cCCEEEEcCCCCCCCC---CHHHHhhCCCceEEccCc-----hhhHHHH--hhhhcc
Q 038498          188 WDKTYCLRYLDD---FNEIHFFGDKTYKGGN---DHEIFESERTVGHTVTSP-----EDTMEKC--KALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~---~~~~~aiGD~~~~~~N---Di~M~~~~g~~~~av~Na-----~~~~k~~--A~~v~~  246 (248)
                      ..|...++.+++   ++++++|||    +.+   |+...+.+|+.++++...     .+.+++.  ++++..
T Consensus       146 ~~K~~~~~~~~~~~~~~~~~~vgD----s~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~  213 (231)
T 2p11_A          146 IHKELMLDQVMECYPARHYVMVDD----KLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE  213 (231)
T ss_dssp             SSGGGCHHHHHHHSCCSEEEEECS----CHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES
T ss_pred             CChHHHHHHHHhcCCCceEEEEcC----ccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec
Confidence            355555555543   889999999    999   677777888677777654     2345554  566554

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.00  E-value=2.8e-06  Score=82.63  Aligned_cols=60  Identities=23%  Similarity=0.305  Sum_probs=53.3

Q ss_pred             EEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          181 FDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       181 ~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      .++.|  -+|...++.+.+ .+.++++||    +.||.+||+.|+ .|+||+|+.+.+|+.|++|+..
T Consensus       678 ~r~~P--~~K~~~v~~l~~~g~~v~~~GD----G~ND~~alk~Ad-vgiamg~g~~~ak~aAd~vl~~  738 (995)
T 3ar4_A          678 ARVEP--SHKSKIVEYLQSYDEITAMTGD----GVNDAPALKKAE-IGIAMGSGTAVAKTASEMVLAD  738 (995)
T ss_dssp             ESCCS--SHHHHHHHHHHTTTCCEEEEEC----SGGGHHHHHHST-EEEEETTSCHHHHHTCSEEETT
T ss_pred             EEeCH--HHHHHHHHHHHHCCCEEEEEcC----CchhHHHHHHCC-eEEEeCCCCHHHHHhCCEEECC
Confidence            34445  499999999998 668999999    999999999999 9999999999999999999843

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.97  E-value=4.7e-06  Score=81.25  Aligned_cols=54  Identities=19%  Similarity=0.213  Sum_probs=49.8

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhcc
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFLA  246 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~~  246 (248)
                      -+|...++.+.+ .+.++++||    +.||.+||+.|+ .|+||+ |+.+.+|++|++|+.
T Consensus       701 ~~K~~iV~~lq~~g~~V~~iGD----G~ND~paLk~Ad-vGIAmg~~gtd~ak~aAD~Vl~  756 (1028)
T 2zxe_A          701 QQKLIIVEGCQRQGAIVAVTGD----GVNDSPALKKAD-IGVAMGISGSDVSKQAADMILL  756 (1028)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEC----SGGGHHHHHHSS-EEEEESSSCCHHHHHHCSEEET
T ss_pred             HHHHHHHHHHHhCCCEEEEEcC----CcchHHHHHhCC-ceEEeCCccCHHHHHhcCEEec
Confidence            479999999987 567999999    999999999999 999999 799999999999974

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=97.97  E-value=3e-07  Score=75.61  Aligned_cols=42  Identities=10%  Similarity=-0.107  Sum_probs=33.3

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCC-CCCHHHHhhCCC-ceEEccCc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKG-GNDHEIFESERT-VGHTVTSP  233 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~-~NDi~M~~~~g~-~~~av~Na  233 (248)
                      -.+......+++     ++++++|||    + .||+.+.+.+|+ .+++|.+.
T Consensus       176 KP~p~~~~~~~~~~~~~~~~~~~vGD----s~~~Di~~A~~aG~~~~i~v~~~  224 (260)
T 2gfh_A          176 KPAPSIFYHCCDLLGVQPGDCVMVGD----TLETDIQGGLNAGLKATVWINKS  224 (260)
T ss_dssp             TTCHHHHHHHHHHHTCCGGGEEEEES----CTTTHHHHHHHTTCSEEEEECTT
T ss_pred             CCCHHHHHHHHHHcCCChhhEEEECC----CchhhHHHHHHCCCceEEEEcCC
Confidence            334556666664     889999999    9 899999999995 47888664

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.94  E-value=3.3e-06  Score=81.09  Aligned_cols=60  Identities=22%  Similarity=0.300  Sum_probs=54.0

Q ss_pred             EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      +.++.|  -+|...++.|.+ -+.++++||    +.||.+||+.++ .|+||+++.+.+|++|++|+.
T Consensus       607 ~arv~P--~~K~~iV~~Lq~~g~~Vam~GD----GvNDapaLk~Ad-vGIAmg~gtd~ak~aADiVl~  667 (920)
T 1mhs_A          607 FAEVFP--QHKYNVVEILQQRGYLVAMTGD----GVNDAPSLKKAD-TGIAVEGSSDAARSAADIVFL  667 (920)
T ss_dssp             EESCCS--THHHHHHHHHHTTTCCCEECCC----CGGGHHHHHHSS-EEEEETTSCHHHHHSSSEEES
T ss_pred             EEEeCH--HHHHHHHHHHHhCCCeEEEEcC----CcccHHHHHhCC-cCcccccccHHHHHhcCeEEc
Confidence            455666  499999999998 567999999    999999999999 999999999999999999874

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=97.91  E-value=6.4e-06  Score=65.70  Aligned_cols=27  Identities=22%  Similarity=0.311  Sum_probs=21.2

Q ss_pred             EEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          203 IHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       203 ~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      +++|||    +.+|+.+.+.+|+.++.+..+
T Consensus       161 ~l~VGD----s~~Di~aA~~aG~~~i~v~~g  187 (211)
T 2b82_A          161 RIFYGD----SDNDITAARDVGARGIRILRA  187 (211)
T ss_dssp             EEEEES----SHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEEEC----CHHHHHHHHHCCCeEEEEecC
Confidence            778888    888888888888777777654

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.87  E-value=1.6e-05  Score=70.02  Aligned_cols=45  Identities=29%  Similarity=0.412  Sum_probs=38.5

Q ss_pred             ccceEEEEecCCCCCCCCC------------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            5 KQGLLALFDVDGTLTAPRK------------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      .++|+++||+||||+.+..            .+.+.+.++|+.|+++ ++++|+|+++
T Consensus        56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~  113 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQM  113 (416)
T ss_dssp             CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred             CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence            4589999999999986542            2568899999999999 9999999965

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=97.81  E-value=4.6e-06  Score=79.92  Aligned_cols=61  Identities=23%  Similarity=0.376  Sum_probs=54.0

Q ss_pred             EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +.++.|.  +|...++.|++ .+.++++||    +.||.+||+.++ .|+||+++++.+|++|++|+..
T Consensus       561 ~arv~P~--~K~~iV~~lq~~g~~Vam~GD----GvNDapaLk~Ad-vGIAmg~gtd~ak~aADivl~~  622 (885)
T 3b8c_A          561 FAGVFPE--HKYEIVKKLQERKHIVGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASDIVLTE  622 (885)
T ss_dssp             EECCCHH--HHHHHHHHHHHTTCCCCBCCC----SSTTHHHHHHSS-SCCCCSSSHHHHGGGCSSCCSS
T ss_pred             EEEECHH--HHHHHHHHHHHCCCeEEEEcC----CchhHHHHHhCC-EeEEeCCccHHHHHhcceeecc
Confidence            4445564  89999999998 567999999    999999999999 9999999999999999998843

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=97.78  E-value=2.5e-05  Score=60.28  Aligned_cols=43  Identities=12%  Similarity=0.016  Sum_probs=37.5

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA  246 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~  246 (248)
                      ++++++|||    +.+|+.+.+.+|+.++.+.......++++..+++
T Consensus       133 ~~~~l~VGD----~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~l~~  175 (176)
T 2fpr_A          133 RANSYVIGD----RATDIQLAENMGINGLRYDRETLNWPMIGEQLTR  175 (176)
T ss_dssp             GGGCEEEES----SHHHHHHHHHHTSEEEECBTTTBCHHHHHHHTC-
T ss_pred             HHHEEEEcC----CHHHHHHHHHcCCeEEEEcCCcccHHHHHHHHhc
Confidence            678999999    9999999999998889999888888888887654

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=97.58  E-value=3e-05  Score=60.45  Aligned_cols=36  Identities=14%  Similarity=0.199  Sum_probs=30.8

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHH
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC  240 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~  240 (248)
                      ++++++|||    +.||+.|.+.+| ..+++.|+.+.+++.
T Consensus       165 ~~~~~~vgD----~~~Di~~a~~aG-~~~~~~~~~~~~~~~  200 (206)
T 2b0c_A          165 PSDTVFFDD----NADNIEGANQLG-ITSILVKDKTTIPDY  200 (206)
T ss_dssp             GGGEEEEES----CHHHHHHHHTTT-CEEEECCSTTHHHHH
T ss_pred             HHHeEEeCC----CHHHHHHHHHcC-CeEEEecCCchHHHH
Confidence            789999999    999999999999 777777777776654

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.55  E-value=7.4e-05  Score=64.24  Aligned_cols=67  Identities=13%  Similarity=0.146  Sum_probs=47.1

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCC---hHHHHHHhcc--cccCCCceEEecC
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSD---LSKISEQLGK--TVIDEYDYVFSEN   72 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~---~~~~~~~l~~--~~~~~~~~~i~~n   72 (248)
                      ++.|.++||+||||++....+ +...++|+.|+++ +.++++|+++   .....+.+..  .+....+-++++.
T Consensus        11 ~~~~~~l~D~DGvl~~g~~~~-p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~   83 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFRGKKPI-AGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSH   83 (352)
T ss_dssp             -CCEEEEECCBTTTEETTEEC-TTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTT
T ss_pred             ccCCEEEEECCCeeEcCCeeC-cCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehH
Confidence            367999999999999876554 5789999999999 9999999654   4444443321  1233445566543

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.42  E-value=6.5e-05  Score=61.72  Aligned_cols=47  Identities=19%  Similarity=0.118  Sum_probs=37.4

Q ss_pred             ccceEEEEecCCCCCCCC----------CCCC----------------HHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            5 KQGLLALFDVDGTLTAPR----------KAAT----------------PQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~----------~~i~----------------~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      .+..+|+||+||||++..          ...+                +.+.+.|+.|+++ ++++++|||+-.
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~  129 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDS  129 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            456799999999999763          2233                3567789999999 999999999753

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=96.45  E-value=2.9e-05  Score=63.88  Aligned_cols=52  Identities=23%  Similarity=0.311  Sum_probs=47.5

Q ss_pred             CHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498          189 DKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       189 ~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~  245 (248)
                      .|..+++.+.. ++++++|||    +.||+++++.+| .+++++++.+..++.|++++
T Consensus       186 ~k~~~~~~l~~~~~~~~~VGD----~~~D~~aa~~Ag-v~va~g~~~~~~~~~ad~v~  238 (263)
T 2yj3_A          186 DKVRIIEKLKQNGNKVLMIGD----GVNDAAALALAD-VSVAMGNGVDISKNVADIIL  238 (263)
Confidence            68888888876 789999999    999999999999 99999999988888898887

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.32  E-value=6.1e-05  Score=61.84  Aligned_cols=45  Identities=18%  Similarity=0.152  Sum_probs=36.2

Q ss_pred             ceEEEEecCCCCCCCC----------CCC----------------CHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498            7 GLLALFDVDGTLTAPR----------KAA----------------TPQMLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~----------~~i----------------~~~~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      .++|+||+||||++..          ...                -+.+.+.|+.|+++ +.++++|||+..
T Consensus        58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~  129 (260)
T 3pct_A           58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDD  129 (260)
T ss_dssp             CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETT
T ss_pred             CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            3599999999999763          122                34678889999999 999999999753

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=97.20  E-value=0.00016  Score=56.26  Aligned_cols=15  Identities=33%  Similarity=0.496  Sum_probs=13.6

Q ss_pred             ceEEEEecCCCCCCC
Q 038498            7 GLLALFDVDGTLTAP   21 (248)
Q Consensus         7 ~kli~~DlDGTLl~~   21 (248)
                      .|+|+||+||||+++
T Consensus         2 ~k~viFDlDGTL~Ds   16 (193)
T 2i7d_A            2 SVRVLVDMDGVLADF   16 (193)
T ss_dssp             CEEEEECSBTTTBCH
T ss_pred             CcEEEEECCCcCccc
Confidence            489999999999986

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=97.12  E-value=0.00037  Score=55.11  Aligned_cols=54  Identities=17%  Similarity=0.299  Sum_probs=39.9

Q ss_pred             CHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch--hhHHHHhhhhccC
Q 038498          189 DKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE--DTMEKCKALFLAK  247 (248)
Q Consensus       189 ~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~--~~~k~~A~~v~~~  247 (248)
                      .|...++.+++   .+++++|||    +.||+.+.+.+| .++++++..  +..+..++++..+
T Consensus       157 ~Kp~~~~~~~~~~~~~~~~~vGD----s~~Di~~a~~ag-~~i~~~~~~~~~~~~~~~~~~~~~  215 (225)
T 1nnl_A          157 GKGKVIKLLKEKFHFKKIIMIGD----GATDMEACPPAD-AFIGFGGNVIRQQVKDNAKWYITD  215 (225)
T ss_dssp             HHHHHHHHHHHHHCCSCEEEEES----SHHHHTTTTTSS-EEEEECSSCCCHHHHHHCSEEESC
T ss_pred             chHHHHHHHHHHcCCCcEEEEeC----cHHhHHHHHhCC-eEEEecCccccHHHHhcCCeeecC
Confidence            46666666654   368999999    999999999999 699997642  3455566766543

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=96.74  E-value=0.00096  Score=59.32  Aligned_cols=22  Identities=27%  Similarity=0.315  Sum_probs=18.4

Q ss_pred             HHHHHHHHHHhhc-CeEEEEcCC
Q 038498           27 PQMLEFMRELRKV-VTVGVVGGS   48 (248)
Q Consensus        27 ~~~~~al~~l~~~-~~v~iaTGR   48 (248)
                      +.+.++|+.|+++ ++++++|+.
T Consensus       103 ~~~~~~L~~L~~~g~~~~i~Tn~  125 (555)
T 3i28_A          103 RPMLQAALMLRKKGFTTAILTNT  125 (555)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECC
T ss_pred             hhHHHHHHHHHHCCCEEEEEeCC
Confidence            3456778889999 999999997

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=96.51  E-value=0.00055  Score=57.07  Aligned_cols=55  Identities=13%  Similarity=0.085  Sum_probs=43.0

Q ss_pred             CCCCHHHHHHHhhc-------cCCEEEEcCCCCCCCCCHHHHh---hCCCceEEcc-------CchhhHHHHhhhhc
Q 038498          186 QGWDKTYCLRYLDD-------FNEIHFFGDKTYKGGNDHEIFE---SERTVGHTVT-------SPEDTMEKCKALFL  245 (248)
Q Consensus       186 ~~~~K~~al~~l~~-------~~~~~aiGD~~~~~~NDi~M~~---~~g~~~~av~-------Na~~~~k~~A~~v~  245 (248)
                      ...+|.....+...       .+.++++||    +-||++|++   .+. .+++||       ++.+..++.||.|+
T Consensus       209 ~~~~k~~~~~k~~~~~~~~~~~~~v~~vGD----GiNDa~m~k~l~~ad-vgiaiGfl~~~v~~~~d~~~e~~Divl  280 (297)
T 4fe3_A          209 HVFNKHDGALKNTDYFSQLKDNSNIILLGD----SQGDLRMADGVANVE-HILKIGYLNDRVDELLEKYMDSYDIVL  280 (297)
T ss_dssp             CTTCHHHHHHTCHHHHHHTTTCCEEEEEES----SGGGGGTTTTCSCCS-EEEEEEEECSSHHHHHHHHHHHSSEEE
T ss_pred             chhhcccHHHHHHHHHHhhccCCEEEEEeC----cHHHHHHHhCccccC-eEEEEEecchhHHHhHHHHHhhCCEEE
Confidence            34567666554432       567999999    999999954   777 889988       78888899999886

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=96.46  E-value=0.0028  Score=49.63  Aligned_cols=51  Identities=16%  Similarity=0.173  Sum_probs=39.6

Q ss_pred             ccceEEEEecCCCCCCCCCC-----------------------CCHHHHHHHHHHhhcCeEEEEcCCChHHHHH
Q 038498            5 KQGLLALFDVDGTLTAPRKA-----------------------ATPQMLEFMRELRKVVTVGVVGGSDLSKISE   55 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~   55 (248)
                      .+.+++++||||||+++...                       .-+.+.+.|+++.+.+.++|+|..+...+..
T Consensus        26 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~   99 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADP   99 (195)
T ss_dssp             TTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHH
T ss_pred             CCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHH
Confidence            46799999999999986321                       2366788999988779999999998764433

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=96.45  E-value=0.0007  Score=53.47  Aligned_cols=31  Identities=13%  Similarity=0.158  Sum_probs=23.7

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMREL   36 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l   36 (248)
                      ++|+|+||+||||+++...+.....++++++
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~   32 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDN   32 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHHHHHHT
T ss_pred             CceEEEEcCCCceecccccHHHHHHHHHHHh
Confidence            5789999999999998766655556666544

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=96.41  E-value=0.0014  Score=50.65  Aligned_cols=33  Identities=21%  Similarity=0.355  Sum_probs=20.7

Q ss_pred             CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498            1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMREL   36 (248)
Q Consensus         1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l   36 (248)
                      |+..+++|+|+||+||||+++..   ....+++.++
T Consensus         1 M~~~~~~k~viFDlDGTL~d~~~---~~~~~~~~~~   33 (206)
T 2b0c_A            1 MARKEAKMLYIFDLGNVIVDIDF---NRVLGAWSDL   33 (206)
T ss_dssp             -----CCCEEEECCBTTTEEEET---HHHHHHHHHH
T ss_pred             CCccccccEEEEcCCCeeecCcH---HHHHHHHHHh
Confidence            56666789999999999998852   3444555443

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=96.29  E-value=0.0035  Score=48.47  Aligned_cols=56  Identities=16%  Similarity=0.272  Sum_probs=41.7

Q ss_pred             cccceEEEEecCCCCCCCCCC-----------------------CCHHHHHHHHHHhhcCeEEEEcCCChHH---HHHHh
Q 038498            4 RKQGLLALFDVDGTLTAPRKA-----------------------ATPQMLEFMRELRKVVTVGVVGGSDLSK---ISEQL   57 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~~~v~iaTGR~~~~---~~~~l   57 (248)
                      ..+.+++++|||+||+++...                       .-+.+.+.|+++.+.+.++|.|..+...   +.+.+
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~l   91 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLL   91 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHH
T ss_pred             cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHH
Confidence            356799999999999986321                       2456788898888779999999998764   44444


Q ss_pred             cc
Q 038498           58 GK   59 (248)
Q Consensus        58 ~~   59 (248)
                      +.
T Consensus        92 d~   93 (181)
T 2ght_A           92 DK   93 (181)
T ss_dssp             CT
T ss_pred             CC
Confidence            43

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=96.23  E-value=0.0022  Score=51.28  Aligned_cols=48  Identities=17%  Similarity=0.115  Sum_probs=36.9

Q ss_pred             CCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498          187 GWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK  239 (248)
Q Consensus       187 ~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~  239 (248)
                      +..|..+++.+.- ++++++|||    +.||+.+.+.+| ..++..+..+.++.
T Consensus       149 ~~~K~~~~~~~~~~~~~~~~vGD----s~~Di~~a~~aG-~~~~~~~~~~~~~~  197 (236)
T 2fea_A          149 GCCKPSVIHELSEPNQYIIMIGD----SVTDVEAAKLSD-LCFARDYLLNECRE  197 (236)
T ss_dssp             SSCHHHHHHHHCCTTCEEEEEEC----CGGGHHHHHTCS-EEEECHHHHHHHHH
T ss_pred             CCcHHHHHHHHhccCCeEEEEeC----ChHHHHHHHhCC-eeeechHHHHHHHH
Confidence            4568899998864 889999999    999999999999 66654333333433

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=96.17  E-value=0.009  Score=49.54  Aligned_cols=45  Identities=27%  Similarity=0.420  Sum_probs=38.6

Q ss_pred             cceEEEEecCCCCCCCCCCC------------CHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498            6 QGLLALFDVDGTLTAPRKAA------------TPQMLEFMRELRKV-VTVGVVGGSDL   50 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i------------~~~~~~al~~l~~~-~~v~iaTGR~~   50 (248)
                      ..+.+++|+|||+....+.+            -+.+.++|+.|+++ ++++++|||+.
T Consensus       158 ~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~  215 (301)
T 1ltq_A          158 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRES  215 (301)
T ss_dssp             SCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred             ccceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            34789999999998776655            58899999999999 99999999973

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=95.86  E-value=0.0031  Score=49.63  Aligned_cols=17  Identities=29%  Similarity=0.341  Sum_probs=15.1

Q ss_pred             cceEEEEecCCCCCCCC
Q 038498            6 QGLLALFDVDGTLTAPR   22 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~   22 (248)
                      ++|+|+||+||||+++.
T Consensus        13 ~~k~viFD~DGTLvd~~   29 (225)
T 1nnl_A           13 SADAVCFDVDSTVIREE   29 (225)
T ss_dssp             HCSEEEEETBTTTBSSC
T ss_pred             hCCEEEEeCcccccccc
Confidence            47899999999999874

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=95.84  E-value=0.00061  Score=53.11  Aligned_cols=30  Identities=13%  Similarity=-0.230  Sum_probs=26.0

Q ss_pred             cCCEEEEcCCCCCCCCC----HHHHh-hCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGND----HEIFE-SERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~ND----i~M~~-~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|    +...+ .+|+.++.+.++
T Consensus       132 ~~~~~~vgD----s~~dD~~~~~~a~~~aG~~~i~~~~~  166 (197)
T 1q92_A          132 RDKTVVSAD----LLIDDRPDITGAEPTPSWEHVLFTAC  166 (197)
T ss_dssp             SCSTTSCCS----EEEESCSCCCCSCSSCSSEEEEECCT
T ss_pred             CccEEEECc----ccccCCchhhhcccCCCceEEEecCc
Confidence            789999999    9999    98888 888788888764

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=95.42  E-value=0.0029  Score=51.65  Aligned_cols=29  Identities=21%  Similarity=0.148  Sum_probs=26.4

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      ++++++|||    +.+|+...+.+|+.++.|..
T Consensus       204 p~~~l~VgD----s~~di~aA~~aG~~~i~v~~  232 (261)
T 1yns_A          204 TNNILFLTD----VTREASAAEEADVHVAVVVR  232 (261)
T ss_dssp             GGGEEEEES----CHHHHHHHHHTTCEEEEECC
T ss_pred             cccEEEEcC----CHHHHHHHHHCCCEEEEEeC
Confidence            889999999    99999999999988888854

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=95.42  E-value=0.0045  Score=47.21  Aligned_cols=26  Identities=15%  Similarity=-0.022  Sum_probs=22.1

Q ss_pred             CCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          201 NEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       201 ~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      +++++|||    +.+++.  +++| .++++.++
T Consensus       129 ~~~l~ieD----s~~~i~--~aaG-~~i~~~~~  154 (180)
T 3bwv_A          129 LADYLIDD----NPKQLE--IFEG-KSIMFTAS  154 (180)
T ss_dssp             CCSEEEES----CHHHHH--HCSS-EEEEECCG
T ss_pred             cccEEecC----CcchHH--HhCC-CeEEeCCC
Confidence            67899999    999986  6788 99998754

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=94.76  E-value=0.016  Score=41.39  Aligned_cols=49  Identities=10%  Similarity=0.008  Sum_probs=36.2

Q ss_pred             HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498          191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL  243 (248)
Q Consensus       191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~  243 (248)
                      ....+.+++     ++++++|||    +.+|+.+.+.+|+.++.+.......+.+.+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~vgD----~~~di~~a~~~G~~~i~~~~~~~~~~~l~~~  130 (137)
T 2pr7_A           77 EAAFQAAADAIDLPMRDCVLVDD----SILNVRGAVEAGLVGVYYQQFDRAVVEIVGL  130 (137)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEES----CHHHHHHHHHHTCEEEECSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccEEEEcC----CHHHHHHHHHCCCEEEEeCChHHHHHHHHHH
Confidence            344555543     789999999    9999999999997777777766555545443

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=94.73  E-value=0.011  Score=48.04  Aligned_cols=29  Identities=10%  Similarity=0.098  Sum_probs=26.3

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      ++++++|||    +.+|+...+.+|+.++++..
T Consensus       204 p~~~l~vgD----s~~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          204 ASEVLFLSD----NPLELDAAAGVGIATGLASR  232 (253)
T ss_dssp             GGGEEEEES----CHHHHHHHHTTTCEEEEECC
T ss_pred             cccEEEEcC----CHHHHHHHHHcCCEEEEEcC
Confidence            889999999    99999999999988888754

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=94.60  E-value=0.014  Score=46.45  Aligned_cols=17  Identities=29%  Similarity=0.458  Sum_probs=14.6

Q ss_pred             cceEEEEecCCCCCCCC
Q 038498            6 QGLLALFDVDGTLTAPR   22 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~   22 (248)
                      .+|+|+||+||||++++
T Consensus         5 ~~k~viFD~DGTL~d~d   21 (236)
T 2fea_A            5 RKPFIICDFDGTITMND   21 (236)
T ss_dssp             CCEEEEECCTTTTBSSC
T ss_pred             CCcEEEEeCCCCCCccc
Confidence            46899999999999763

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=94.54  E-value=0.011  Score=45.17  Aligned_cols=45  Identities=22%  Similarity=0.308  Sum_probs=38.1

Q ss_pred             ccceEEEEecCCCCCCCC-----------CCCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            5 KQGLLALFDVDGTLTAPR-----------KAATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~-----------~~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      +.+|+++||+||||+...           -.+.+.+.++|++|+++ ++++++|+.+
T Consensus        12 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~   68 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQD   68 (176)
T ss_dssp             -CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred             CcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCc
Confidence            579999999999998762           24577889999999999 9999999874

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=94.34  E-value=0.036  Score=42.39  Aligned_cols=42  Identities=14%  Similarity=0.147  Sum_probs=35.4

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ..|...++.+++     ++++++|||    +.+|+.+.+.+|+.++.|.++
T Consensus       120 ~~k~~~~~~~~~~~~~~~~~~~~igD----~~~Di~~a~~aG~~~i~v~~g  166 (187)
T 2wm8_A          120 GSKITHFERLQQKTGIPFSQMIFFDD----ERRNIVDVSKLGVTCIHIQNG  166 (187)
T ss_dssp             SCHHHHHHHHHHHHCCCGGGEEEEES----CHHHHHHHHTTTCEEEECSSS
T ss_pred             CchHHHHHHHHHHcCCChHHEEEEeC----CccChHHHHHcCCEEEEECCC
Confidence            468777777765     789999999    999999999999778888764

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=94.25  E-value=0.026  Score=44.42  Aligned_cols=51  Identities=12%  Similarity=0.123  Sum_probs=38.5

Q ss_pred             ccceEEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhcCeEEEEcCCChHHHHH
Q 038498            5 KQGLLALFDVDGTLTAPRK--------AATPQMLEFMRELRKVVTVGVVGGSDLSKISE   55 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~   55 (248)
                      .+.+++++|||+||+++..        ..=|...+.|+.+.+.+.++|.|..+..-...
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~   90 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDK   90 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHH
T ss_pred             CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHH
Confidence            4568999999999998732        13567789999998449999999887654333

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=94.21  E-value=0.076  Score=44.73  Aligned_cols=52  Identities=23%  Similarity=0.312  Sum_probs=38.8

Q ss_pred             cccceEEEEecCCCCCCCCCC-------CCHHHHHHHHHHhhcCeEEEEcCCChHHHHH
Q 038498            4 RKQGLLALFDVDGTLTAPRKA-------ATPQMLEFMRELRKVVTVGVVGGSDLSKISE   55 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~~-------i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~   55 (248)
                      +.+.+++++||||||+++...       .=|...+.|+.+.+.+.++|-|.........
T Consensus       137 ~~~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~  195 (320)
T 3shq_A          137 REGKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEE  195 (320)
T ss_dssp             CTTCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHHHHEEEEEECSSCHHHHHH
T ss_pred             cCCCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHH
Confidence            356799999999999998642       2445678888888558888888887654333

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=93.78  E-value=0.025  Score=48.95  Aligned_cols=41  Identities=15%  Similarity=0.158  Sum_probs=31.5

Q ss_pred             CCCCHHHHHHHhhc----cCCEEEEcCCCCCCCCCHHHHhhCCC--ceEEc
Q 038498          186 QGWDKTYCLRYLDD----FNEIHFFGDKTYKGGNDHEIFESERT--VGHTV  230 (248)
Q Consensus       186 ~~~~K~~al~~l~~----~~~~~aiGD~~~~~~NDi~M~~~~g~--~~~av  230 (248)
                      .+-.|..+|+.++.    ...++++||    |.||++||+..+-  .++.+
T Consensus       294 ~~~gK~~~i~~~~~~~~~~~~i~a~GD----s~~D~~ML~~~~~~~~~lii  340 (385)
T 4gxt_A          294 IREGKVQTINKLIKNDRNYGPIMVGGD----SDGDFAMLKEFDHTDLSLII  340 (385)
T ss_dssp             STHHHHHHHHHHTCCTTEECCSEEEEC----SGGGHHHHHHCTTCSEEEEE
T ss_pred             CCCchHHHHHHHHHhcCCCCcEEEEEC----CHhHHHHHhcCccCceEEEE
Confidence            45569999998874    567999999    9999999996321  45555

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=92.96  E-value=0.099  Score=39.99  Aligned_cols=41  Identities=12%  Similarity=0.064  Sum_probs=33.0

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCch
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na~  234 (248)
                      +....+.+++     ++++++|||    + .+|+.+.+.+|+.++.+.++.
T Consensus        99 ~p~~~~~~~~~~~~~~~~~l~VGD----~~~~Di~~A~~aG~~~i~v~~~~  145 (189)
T 3ib6_A           99 DKTIFDFTLNALQIDKTEAVMVGN----TFESDIIGANRAGIHAIWLQNPE  145 (189)
T ss_dssp             SHHHHHHHHHHHTCCGGGEEEEES----BTTTTHHHHHHTTCEEEEECCTT
T ss_pred             CHHHHHHHHHHcCCCcccEEEECC----CcHHHHHHHHHCCCeEEEECCcc
Confidence            3445555554     889999999    9 799999999998888887754

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=92.89  E-value=0.089  Score=44.46  Aligned_cols=34  Identities=18%  Similarity=0.014  Sum_probs=28.0

Q ss_pred             eCCCCHHHHHHHhhc--cCCEEEEcCCCCCC-CCCHHHHhh
Q 038498          185 PQGWDKTYCLRYLDD--FNEIHFFGDKTYKG-GNDHEIFES  222 (248)
Q Consensus       185 ~~~~~K~~al~~l~~--~~~~~aiGD~~~~~-~NDi~M~~~  222 (248)
                      ..+..|..+|+...+  ...++++||    | ..|.+||+.
T Consensus       237 ~~~~GK~~~I~~~i~~g~~Pi~a~Gn----s~dgD~~ML~~  273 (327)
T 4as2_A          237 TWMAGKQAAILTYIDRWKRPILVAGD----TPDSDGYMLFN  273 (327)
T ss_dssp             SSTHHHHHHHHHHTCSSCCCSEEEES----CHHHHHHHHHH
T ss_pred             cccCccHHHHHHHHhhCCCCeEEecC----CCCCCHHHHhc
Confidence            346789999998885  567999999    9 689999965

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=92.77  E-value=0.085  Score=45.40  Aligned_cols=55  Identities=11%  Similarity=0.280  Sum_probs=39.5

Q ss_pred             ccceEEEEecCCCCCCCCCC----------------------------------------CCHHHHHHHHHHhhcCeEEE
Q 038498            5 KQGLLALFDVDGTLTAPRKA----------------------------------------ATPQMLEFMRELRKVVTVGV   44 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~----------------------------------------i~~~~~~al~~l~~~~~v~i   44 (248)
                      .+.+.+++||||||+++...                                        .=|...+.|+.+.+.+.++|
T Consensus        16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~~~yeivI   95 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHI   95 (372)
T ss_dssp             HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHHTTEEEEE
T ss_pred             CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHhcCcEEEE
Confidence            56799999999999988211                                        02456788988884488999


Q ss_pred             EcCCChH---HHHHHhcc
Q 038498           45 VGGSDLS---KISEQLGK   59 (248)
Q Consensus        45 aTGR~~~---~~~~~l~~   59 (248)
                      .|.-+..   .+.+.+..
T Consensus        96 ~Tas~~~yA~~vl~~LDp  113 (372)
T 3ef0_A           96 YTMGTKAYAKEVAKIIDP  113 (372)
T ss_dssp             ECSSCHHHHHHHHHHHCT
T ss_pred             EeCCcHHHHHHHHHHhcc
Confidence            9987765   34555554

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=91.76  E-value=0.13  Score=42.21  Aligned_cols=53  Identities=11%  Similarity=0.231  Sum_probs=43.0

Q ss_pred             cceEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498            6 QGLLALFDVDGTLTAP---RKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG   58 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~   58 (248)
                      ..+++++|+|++++..   ...+-+.+.++|+.|+++ ++++++||++...+...+.
T Consensus       142 g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~  198 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISR  198 (287)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred             CCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence            4578999999998742   345788899999999999 9999999999876554444

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=91.45  E-value=0.098  Score=43.97  Aligned_cols=27  Identities=19%  Similarity=0.261  Sum_probs=21.0

Q ss_pred             CHHHHHHHHHHhhc-CeEEEEcCCChHH
Q 038498           26 TPQMLEFMRELRKV-VTVGVVGGSDLSK   52 (248)
Q Consensus        26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~   52 (248)
                      .+.+.++|+.|+++ ++++++||.+...
T Consensus       180 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~  207 (335)
T 3n28_A          180 MPELPELVATLHAFGWKVAIASGGFTYF  207 (335)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            34456778889999 9999999987543

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=88.16  E-value=0.44  Score=39.20  Aligned_cols=12  Identities=25%  Similarity=0.254  Sum_probs=10.4

Q ss_pred             EEEEecCCCCCC
Q 038498            9 LALFDVDGTLTA   20 (248)
Q Consensus         9 li~~DlDGTLl~   20 (248)
                      .|+||+||||+.
T Consensus        45 ~VV~DfdgTLT~   56 (297)
T 4fe3_A           45 QIITDFNMTLSR   56 (297)
T ss_dssp             EEEECCTTTTBC
T ss_pred             EEEEcCCCCcee
Confidence            489999999985

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=88.08  E-value=0.3  Score=39.67  Aligned_cols=30  Identities=20%  Similarity=-0.059  Sum_probs=26.5

Q ss_pred             cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    + .+|+.+.+.+|+.++.|..+
T Consensus       225 ~~~~~~VGD----~~~~Di~~A~~aG~~~i~v~~g  255 (284)
T 2hx1_A          225 KREILMVGD----TLHTDILGGNKFGLDTALVLTG  255 (284)
T ss_dssp             GGGEEEEES----CTTTHHHHHHHHTCEEEEESSS
T ss_pred             cceEEEECC----CcHHHHHHHHHcCCeEEEECCC
Confidence            779999999    9 49999999999888888754

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=85.27  E-value=0.29  Score=42.30  Aligned_cols=30  Identities=10%  Similarity=-0.026  Sum_probs=27.2

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|+.+.+.+|+.+++|..+
T Consensus       315 p~e~l~VGD----s~~Di~aAk~AG~~~I~V~~g  344 (384)
T 1qyi_A          315 KDDVFIVGD----SLADLLSAQKIGATFIGTLTG  344 (384)
T ss_dssp             TTTEEEEES----SHHHHHHHHHHTCEEEEESCB
T ss_pred             CcCeEEEcC----CHHHHHHHHHcCCEEEEECCC
Confidence            789999999    999999999999888888764

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=84.86  E-value=0.64  Score=37.45  Aligned_cols=22  Identities=23%  Similarity=0.376  Sum_probs=17.4

Q ss_pred             CcccccceEEEEecCCCCCCCC
Q 038498            1 MAARKQGLLALFDVDGTLTAPR   22 (248)
Q Consensus         1 ~~~~~~~kli~~DlDGTLl~~~   22 (248)
                      |...+++|+|+||+||||+++.
T Consensus         4 m~~~m~ikaviFDlDGTL~ds~   25 (261)
T 1yns_A            4 LSVPAEVTVILLDIEGTTTPIA   25 (261)
T ss_dssp             CBCCTTCCEEEECCBTTTBCHH
T ss_pred             cccCcCCCEEEEecCCCccchh
Confidence            3344468999999999999873

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=84.71  E-value=0.26  Score=38.08  Aligned_cols=30  Identities=3%  Similarity=-0.214  Sum_probs=26.6

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|+.+.+.+|+.+++|...
T Consensus       105 ~~~~v~VGD----s~~Di~aA~~aG~~~i~v~~g  134 (196)
T 2oda_A          105 LEGCVLISG----DPRLLQSGLNAGLWTIGLASC  134 (196)
T ss_dssp             STTCEEEES----CHHHHHHHHHHTCEEEEESSS
T ss_pred             CccEEEEeC----CHHHHHHHHHCCCEEEEEccC
Confidence            378999999    999999999999888888764

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=83.35  E-value=0.64  Score=43.66  Aligned_cols=54  Identities=20%  Similarity=0.297  Sum_probs=43.8

Q ss_pred             ccceEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHH---HHhc
Q 038498            5 KQGLLALFDVDGTLTAP---RKAATPQMLEFMRELRKV-VTVGVVGGSDLSKIS---EQLG   58 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~---~~l~   58 (248)
                      +..+.+++..||+++.-   ..++.+.+.++|++|+++ ++++++|||+.....   ++++
T Consensus       532 ~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lg  592 (736)
T 3rfu_A          532 KGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG  592 (736)
T ss_dssp             TTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             cCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence            45688999999998742   345888999999999999 999999999987544   4554

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=80.53  E-value=0.94  Score=36.46  Aligned_cols=17  Identities=24%  Similarity=0.305  Sum_probs=15.0

Q ss_pred             cceEEEEecCCCCCCCC
Q 038498            6 QGLLALFDVDGTLTAPR   22 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~   22 (248)
                      ++|+|+||+||||+++.
T Consensus        30 ~ikaviFDlDGTLvDs~   46 (253)
T 2g80_A           30 NYSTYLLDIEGTVCPIS   46 (253)
T ss_dssp             CCSEEEECCBTTTBCTH
T ss_pred             CCcEEEEcCCCCccccc
Confidence            47999999999999973

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=80.24  E-value=0.94  Score=39.68  Aligned_cols=43  Identities=19%  Similarity=0.228  Sum_probs=32.0

Q ss_pred             HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhH
Q 038498          191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTM  237 (248)
Q Consensus       191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~  237 (248)
                      ......+++     ++++++|||    +.||+.+.+.+|+.++.........
T Consensus       163 p~~~~~~~~~lg~~p~~~~~v~D----~~~di~~a~~aG~~~~~~~~~~~~~  210 (555)
T 3i28_A          163 PQIYKFLLDTLKASPSEVVFLDD----IGANLKPARDLGMVTILVQDTDTAL  210 (555)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEES----CHHHHHHHHHHTCEEEECSSHHHHH
T ss_pred             HHHHHHHHHHcCCChhHEEEECC----cHHHHHHHHHcCCEEEEECCCccHH
Confidence            445555554     889999999    9999999999996666665544433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	248
d2amya1	243	c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (	2e-47
d2fuea1	244	c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human	3e-43
d1u02a_	229	c.108.1.15 (A:) Trehalose-6-phosphate phosphatase	8e-14
d1nrwa_	285	c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu	4e-09
d1rkqa_	271	c.108.1.10 (A:) Hypothetical protein YidA {Escheri	1e-08
d1nf2a_	267	c.108.1.10 (A:) Hypothetical protein TM0651 {Therm	1e-08
d2b30a1	283	c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod	5e-07
d2rbka1	260	c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B	7e-07
d1xvia_	232	c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera	2e-06
d1s2oa1	244	c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {	5e-06
d1rlma_	269	c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc	1e-04
d1l6ra_	225	c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa	1e-04
d1wr8a_	230	c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa	0.001
d1wzca1	243	c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl	0.001

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 2e-47
 Identities = 146/238 (61%), Positives = 185/238 (77%), Gaps = 2/238 (0%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
           L LFDVDGTLTAPR+  T +M +F+++LR+ + +GVVGGSD  K+ EQLG  V+++YDYV
Sbjct: 5   LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYV 64

Query: 69  FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
           F ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFIEFR+GML
Sbjct: 65  FPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGML 124

Query: 129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGW 188
           N+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISFDVFP GW
Sbjct: 125 NVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGW 184

Query: 189 DKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
           DK YCLR++  D +  I+FFGDKT  GGNDHEIF   RT+G++VT+PEDT   C+ LF
Sbjct: 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 242

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (364), Expect = 3e-43
 Identities = 136/242 (56%), Positives = 176/242 (72%), Gaps = 4/242 (1%)

Query: 8   LLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT--VIDEY 65
           +L LFDVDGTLT  R+   P++  F+++LR  V +GVVGGSD  KI+EQLG    VI+++
Sbjct: 2   VLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKF 61

Query: 66  DYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS 125
           DYVF+ENG V +K G+L+  Q++++ LG E L++ INF L Y+A L +P KRGTFIEFR+
Sbjct: 62  DYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRN 121

Query: 126 GMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP 185
           GMLNISPIGR+C+ EER EF   DK   IR K V  L+ +FA   L FS GG ISFDVFP
Sbjct: 122 GMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFP 181

Query: 186 QGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL 243
           +GWDK YCL  L  D F+ IHFFG++T  GGND EIF   RTVGH+V SP+DT+++C+ +
Sbjct: 182 EGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREI 241

Query: 244 FL 245
           F 
Sbjct: 242 FF 243

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 66.5 bits (161), Expect = 8e-14
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 49/252 (19%)

Query: 9   LALFDVDGTLTAP-----RKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVID 63
           L   D DGTL           A   +L  + +L++     +V G    +IS       + 
Sbjct: 2   LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRF-----LP 56

Query: 64  EYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEF 123
               +   +G  +  +G+++                  +  L     +          E 
Sbjct: 57  LDINMICYHGACSKINGQIV-------------YNNGSDRFLGVFDRI---------YED 94

Query: 124 RSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDV 183
               ++  P  R   +     +       +++PK+ S + E      +     G++  ++
Sbjct: 95  TRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVET-YYGKMIIEL 153

Query: 184 FPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESER-----TVG-------HTVT 231
              G +K   +R +         GD       D   FE+        VG         V 
Sbjct: 154 RVPGVNKGSAIRSVRGERPAIIAGD----DATDEAAFEANDDALTIKVGEGETHAKFHVA 209

Query: 232 SPEDTMEKCKAL 243
              +  +  K +
Sbjct: 210 DYIEMRKILKFI 221

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

 Score = 53.4 bits (127), Expect = 4e-09
 Identities = 49/259 (18%), Positives = 82/259 (31%), Gaps = 46/259 (17%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLG------ 58
           L   D+DGTL   +   + +    +R+ ++  + V V  G    D+  I E LG      
Sbjct: 3   LIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVI 62

Query: 59  ----------------------KTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEK 96
                                 K   D   ++ SEN       G  I T      L   +
Sbjct: 63  SANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVE 122

Query: 97  LKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRP 156
           L  F   + +  ADL +  +       +SG   I+        +E  +F         + 
Sbjct: 123 LDRF--RSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKE 180

Query: 157 KMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIH-----FFGDKTY 211
           K+ +  +      +LT     + +F++  +   K   L+ L     I        GD   
Sbjct: 181 KLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGD--- 237

Query: 212 KGGNDHEIFESERTVGHTV 230
              ND  + E     G  V
Sbjct: 238 -SLNDKSMLE---AAGKGV 252

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

 Score = 52.3 bits (124), Expect = 1e-08
 Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 23/238 (9%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELR-KVVTVGVVGGSDLSKISEQLGKTVIDEY-D 66
           L   D+DGTL  P    +P +   +   R + V V +  G   + +   L +  +++  D
Sbjct: 6   LIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGD 65

Query: 67  YVFSENGLVAH--KDGKLIGTQSL----KSFLGGEKLKEFINFTLHYIADLDIPIKRGTF 120
           Y  + NG +     DG  +   +L      FL     +   +F       L    +  ++
Sbjct: 66  YCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISY 125

Query: 121 IEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHL---NLTFSIGG 177
                  +   P+    +++     +    +    P ++     +         T     
Sbjct: 126 YTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSA 185

Query: 178 QISFDVFPQGWDKTYCLRYLDDFNEIH-----FFGDKTYKGGNDHEIFESERTVGHTV 230
               ++  +  +K   ++ L D   I        GD      ND  + E     G  V
Sbjct: 186 PYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGD----QENDIAMIE---YAGVGV 236

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 34/228 (14%), Positives = 60/228 (26%), Gaps = 23/228 (10%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYV 68
           + +FD+DGTL       + +    + +L +   V    G  L        K         
Sbjct: 4   VFVFDLDGTLLNDNLEISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVE-KKYFKRTFPT 62

Query: 69  FSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML 128
            + NG + +   + +           E  K+ I +           I    + E  +  +
Sbjct: 63  IAYNGAIVYLPEEGVILNEKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEI 119

Query: 129 NISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHL----------NLTFSIGGQ 178
                  N                     ++    E+   L           +       
Sbjct: 120 KSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFP 179

Query: 179 ISFDVFPQGWDKT-----YCLRYLDDFNEIHFFGDKTYKGGNDHEIFE 221
              ++ P+  DK         R      EI  FGD      ND  +FE
Sbjct: 180 TYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGD----NENDLFMFE 223

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

 Score = 47.3 bits (111), Expect = 5e-07
 Identities = 37/244 (15%), Positives = 80/244 (32%), Gaps = 31/244 (12%)

Query: 9   LALFDVDGTLTAPRKAA-TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK-----TV 61
           L L D DGTL   +      + ++ ++E  +    V +  G     I    G+       
Sbjct: 12  LLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 71

Query: 62  IDEYDYVFSENGLVAHKDGKLIGTQSL-----KSFLGGEKLKEFINFTLHYIADLDIPIK 116
                 V+    +V  + G  +  +++        +     K  +N T+ +  + +   +
Sbjct: 72  FYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTE 131

Query: 117 RGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRP-----KMVSVLREKFAHLNL 171
              + +F   M +           E  ++   +K+  +        ++  L++KF +  L
Sbjct: 132 DNKYADFLQKMYS-ENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN-KL 189

Query: 172 TFSIGGQISFDVFPQGWDKTYCLRYLDDFN-----EIHFFGDKTYKGGNDHEIFESERTV 226
           T         +V   G DK   + YL         ++   GD      ND  +       
Sbjct: 190 TIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGD----AENDIAMLS---NF 242

Query: 227 GHTV 230
            ++ 
Sbjct: 243 KYSF 246

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

 Score = 46.8 bits (110), Expect = 7e-07
 Identities = 35/230 (15%), Positives = 65/230 (28%), Gaps = 21/230 (9%)

Query: 12  FDVDGTL-TAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVF 69
           FD+DGTL +          +E +       + + +  G   + I+        +  D   
Sbjct: 6   FDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGYI 65

Query: 70  SENGLVAHKDGKLI----GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS 125
           + NG       ++I      Q     +     K+ +        ++ +        +   
Sbjct: 66  TMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFY 125

Query: 126 GMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP 185
             L+++ I    S EE    E       I  +    +        +          DV  
Sbjct: 126 DFLHVNVI-PTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPA--FADVTA 182

Query: 186 QGWDKTYCLRYLDDFN-----EIHFFGDKTYKGGNDHEIFESERTVGHTV 230
           +G  K   +  +         E   FGD    GGND  +          V
Sbjct: 183 KGDTKQKGIDEIIRHFGIKLEETMSFGD----GGNDISMLR---HAAIGV 225

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

 Score = 45.5 bits (106), Expect = 2e-06
 Identities = 27/232 (11%), Positives = 52/232 (22%), Gaps = 19/232 (8%)

Query: 8   LLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYD 66
           LL   D+DGTL             ++  LR+  V V +      +++        +    
Sbjct: 5   LLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG-L 63

Query: 67  YVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG 126
            + +ENG V     +          + G    E                     ++  + 
Sbjct: 64  PLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATI 123

Query: 127 MLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQ 186
                      +  +  E        +   +M                            
Sbjct: 124 AEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHV--LDA 181

Query: 187 GWDKTYCLRYL--------DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230
              K     ++                 GD    G ND  + E    + + V
Sbjct: 182 SAGKDQAANWIIATYQQLSGKRPTTLGLGD----GPNDAPLLE---VMDYAV 226

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

 Score = 43.9 bits (102), Expect = 5e-06
 Identities = 38/228 (16%), Positives = 73/228 (32%), Gaps = 35/228 (15%)

Query: 8   LLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDY 67
           LL + D+D T    ++A    + E++ + R    +    G       E   +  + E DY
Sbjct: 4   LLLISDLDNTWVGDQQALEH-LQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDY 62

Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM 127
             +  G   +        + L         + +    L  IAD    +K  + +E     
Sbjct: 63  WLTAVGSEIYHP------EGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWK 116

Query: 128 LNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187
           ++                        +  ++  +L+E    + + FS G  +  D+ PQ 
Sbjct: 117 ISY--------------HLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDV--DLLPQR 160

Query: 188 -----WDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230
                  +        + ++    GD     GND  +FE   T    V
Sbjct: 161 SNKGNATQYLQQHLAMEPSQTLVCGD----SGNDIGLFE---TSARGV 201

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 31/234 (13%), Positives = 70/234 (29%), Gaps = 20/234 (8%)

Query: 9   LALFDVDGTLTAPRKAAT-PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYD 66
           + + D+DGT     K    P+ +   +EL+K  +   V  G+   ++     +   +   
Sbjct: 4   VIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEIS- 62

Query: 67  YVFSENGLVAHKDGKLIGTQSLKSFLG--GEKLKEFINFTLHYIADLDIPIKRGTFIEFR 124
           +V     LV     +L   +  +        +L +               +       F 
Sbjct: 63  FVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFV 122

Query: 125 SGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKF---AHLNLTFSIGGQISF 181
           + M       +     +  +   +    N+  + + ++ +K        +     G    
Sbjct: 123 ALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFI 182

Query: 182 DVFPQGWDKTYCLRYLD-----DFNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230
           D+   G  K   +  L          +   GD     GND E+ +      ++ 
Sbjct: 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGD----SGNDAEMLK---MARYSF 229

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 40.0 bits (92), Expect = 1e-04
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 45/219 (20%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDY 67
           LA  DVDG LT   +  + + +E +R   K  +TV ++ G+ +  +        I+    
Sbjct: 5   LAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP-V 63

Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM 127
                G++   DG       +K F   E   +F+       +   I   R          
Sbjct: 64  FGENGGIMFDNDGS------IKKFFSNEGTNKFLEEMSKRTSMRSILTNR---------- 107

Query: 128 LNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187
                            +       +I P+ V  +R++           G  S+ +  +G
Sbjct: 108 -----------------WREASTGFDIDPEDVDYVRKEAESRGFVIFYSG-YSWHLMNRG 149

Query: 188 WD-----KTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFE 221
            D           Y  +++EI   GD      ND  +F+
Sbjct: 150 EDKAFAVNKLKEMYSLEYDEILVIGD----SNNDMPMFQ 184

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 33/214 (15%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDY 67
               D+DGT+T P +    + LE +R    + + + +V G+ +                 
Sbjct: 4   AISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVV 63

Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM 127
                 +   K    + +   +  L  E  K F N    Y     +P +R   +  R   
Sbjct: 64  AEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSY----TMPDRRAGLVIMR--- 116

Query: 128 LNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187
                        E    E   +I N     +  +   FA               +    
Sbjct: 117 -------------ETINVETVREIINELNLNLVAVDSGFA--------IHVKKPWINKGS 155

Query: 188 WDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFE 221
             +           E+   GD    G ND + F+
Sbjct: 156 GIEKASEFLGIKPKEVAHVGD----GENDLDAFK 185

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 27/219 (12%), Positives = 51/219 (23%), Gaps = 15/219 (6%)

Query: 9   LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDY 67
           L   D+D TL    +         + EL+ +   +        ++      +  ++    
Sbjct: 4   LIFLDIDKTLIPGYE--PDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKE--LEVETP 59

Query: 68  VFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM 127
             SENG                  +G   + E          +L           + +  
Sbjct: 60  FISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNST 119

Query: 128 LNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187
                       E        +    I         E         ++G +  + V    
Sbjct: 120 KEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRF-YTVHGNS 178

Query: 188 WDKTYCLRYLDDFNEIH-----FFGDKTYKGGNDHEIFE 221
                    LD +  +        GD      ND  +FE
Sbjct: 179 DKGKAAKILLDFYKRLGQIESYAVGD----SYNDFPMFE 213

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	248
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	100.0
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	100.0
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	100.0
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	100.0
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	100.0
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	100.0
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	100.0
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	100.0
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.98
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	99.97
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.97
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	99.97
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.96
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.96
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.68
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.59
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.21
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.08
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.04
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.99
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	98.87
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.86
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.78
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.73
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.51
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	98.49
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	98.45
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	98.4
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	98.39
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.31
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	98.07
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.03
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	97.91
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	97.9
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	97.89
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	97.88
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	97.75
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	97.71
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	97.71
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.66
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.64
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.49
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.39
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	97.24
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	97.16
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	97.09
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	96.85
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	96.83
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	96.66
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	96.06
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	95.28
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	95.22
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	94.9
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	94.72
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	94.49
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	94.42
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	94.03
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	93.87
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	93.39
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	93.38
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	93.35
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	93.07
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	92.72
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	92.66
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	92.48
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	91.13
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	89.01
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	86.86
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	86.68
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	86.26
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	85.95
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	84.41
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	81.24
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	81.2

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=100.00  E-value=1e-38  Score=263.93  Aligned_cols=226  Identities=15%  Similarity=0.143  Sum_probs=160.7

Q ss_pred             eEEEEecCCCCCCCC-CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHH---HHhcccccCCCceEEecCCcEEEeCCcE
Q 038498            8 LLALFDVDGTLTAPR-KAATPQMLEFMRELRKV-VTVGVVGGSDLSKIS---EQLGKTVIDEYDYVFSENGLVAHKDGKL   82 (248)
Q Consensus         8 kli~~DlDGTLl~~~-~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~---~~l~~~~~~~~~~~i~~nGa~i~~~~~~   82 (248)
                      |+|||||||||++.+ +.++++++++|++|+++ +.|+++|||++..+.   +....   ...+++|++||+.++++++.
T Consensus         2 k~if~DlDGTL~~~~~~~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~~~~~---~~~~~~I~~nGa~i~~~~~~   78 (260)
T d2rbka1           2 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDR---NLIDGYITMNGAYCFVGEEV   78 (260)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHHHHHT---TCCCEEEEGGGTEEEETTEE
T ss_pred             eEEEEECCCCCcCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHhc---CCCCceEecCCcccccCccc
Confidence            899999999999864 56999999999999999 999999999987543   33322   23578999999999999999


Q ss_pred             EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccc-eecc--cC-CCCChhhhhhhhh---ccccccch
Q 038498           83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML-NISP--IG-RNCSQEERDEFER---YDKIHNIR  155 (248)
Q Consensus        83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~-~~~~~~~~~~~~~---~~~~~~~~  155 (248)
                      ++...+    +.+.++++++.++++.....+...++.+....+... ....  .. ...+.....+...   +.......
T Consensus        79 i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (260)
T d2rbka1          79 IYKSAI----PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFIT  154 (260)
T ss_dssp             EEECCC----CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCC
T ss_pred             ccccCC----CHHHHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEeecCC
Confidence            888877    578899999988886433222212222222111110 0000  00 0000000000000   00011122


Q ss_pred             HHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498          156 PKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV  230 (248)
Q Consensus       156 ~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av  230 (248)
                      +.....+.+.++.+.+..+  ++.++||+|+++||+.|+++|++     ++++++|||    +.||++||+.+| +++||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~--~~~~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD----~~ND~~Ml~~a~-~svav  227 (260)
T d2rbka1         155 EEEEKEVLPSIPTCEIGRW--YPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGD----GGNDISMLRHAA-IGVAM  227 (260)
T ss_dssp             HHHHHHHGGGSTTCEEECS--STTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEEC
T ss_pred             HHHHHHHHHHhccccceee--cCcEEEEEeCCCCHHHHHHHHHHhccccHhheeEecC----CcccHHHHHhCC-eEEEe
Confidence            3444567777887655554  57789999999999999999997     789999999    999999999999 99999


Q ss_pred             cCchhhHHHHhhhhccC
Q 038498          231 TSPEDTMEKCKALFLAK  247 (248)
Q Consensus       231 ~Na~~~~k~~A~~v~~~  247 (248)
                      +||+|++|+.|++|++.
T Consensus       228 ~na~~~lk~~A~~vt~~  244 (260)
T d2rbka1         228 GQAKEDVKAAADYVTAP  244 (260)
T ss_dssp             TTSCHHHHHHSSEECCC
T ss_pred             CCCCHHHHHhCCEEeCC
Confidence            99999999999999864

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.6e-38  Score=263.84  Aligned_cols=230  Identities=17%  Similarity=0.181  Sum_probs=164.4

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIG   84 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~   84 (248)
                      .+|+|+|||||||+++++.++++++++|+++++.+.++++|||++..+.+.+.... ....++|++||+.+++ +++.++
T Consensus         1 m~Kli~~DlDGTL~~~~~~i~~~~~~al~~l~~~~~~~i~TGR~~~~~~~~~~~~~-~~~~~~I~~nGa~i~~~~~~~i~   79 (267)
T d1nf2a_           1 MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYF-KRTFPTIAYNGAIVYLPEEGVIL   79 (267)
T ss_dssp             CBCEEEEECCCCCSCTTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHHHHS-SSCCCEEEGGGTEEEETTTEEEE
T ss_pred             CeEEEEEeCCccccCCcCccCHHHHHHHHHHHcCCEEEEECCCChHHHHHHHHHhc-ccCCceeccCCeEEEeccccccc
Confidence            36899999999999999999999999999997667799999999988777665521 2223799999999998 677888


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccceeccccc-------eecccCCCCChhhhhh--hhh--cccccc
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGML-------NISPIGRNCSQEERDE--FER--YDKIHN  153 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--~~~--~~~~~~  153 (248)
                      ..++    +.+.+.++++.++++.....+....+.|........       ................  ...  +....+
T Consensus        80 ~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  155 (267)
T d1nf2a_          80 NEKI----PPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPE  155 (267)
T ss_dssp             ECCB----CHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHH
T ss_pred             ccCC----CHHHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccHH
Confidence            8776    578899999988887443322222222222111100       0000000000000000  000  000122


Q ss_pred             chHHHHHHHHHHcCC-ceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498          154 IRPKMVSVLREKFAH-LNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVG  227 (248)
Q Consensus       154 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~  227 (248)
                      ..+++.+.+.+++++ +.+..+  ++.++||+|+++||+.|+++|++     .+++++|||    +.||++||+.+| +|
T Consensus       156 ~~~~~~~~l~~~~~~~~~~~~~--~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD----~~ND~~ml~~~~-~s  228 (267)
T d1nf2a_         156 RLDELKEILSERFKDVVKVFKS--FPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGD----NENDLFMFEEAG-LR  228 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEE--ETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEEC----SHHHHHHHTTCS-EE
T ss_pred             HHHHHHHHHHHhhCCcEEEEEe--ecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcC----CcchHHHHHhCC-cE
Confidence            345566677777764 556555  57899999999999999999997     789999999    999999999999 99


Q ss_pred             EEccCchhhHHHHhhhhccC
Q 038498          228 HTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       228 ~av~Na~~~~k~~A~~v~~~  247 (248)
                      |||+||++++|++|++|+++
T Consensus       229 va~~na~~~~k~~A~~i~~~  248 (267)
T d1nf2a_         229 VAMENAIEKVKEASDIVTLT  248 (267)
T ss_dssp             EECTTSCHHHHHHCSEECCC
T ss_pred             EEeCCCCHHHHHhCCEEcCC
Confidence            99999999999999999965

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=4.2e-37  Score=256.64  Aligned_cols=228  Identities=15%  Similarity=0.218  Sum_probs=158.3

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEE
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIG   84 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~   84 (248)
                      +|+|+|||||||+++++.+++++.++|++|+++ +.++++|||++..+.+.+.. + ...+++|+.||+.+++ +++.++
T Consensus         1 iKli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~-l-~~~~~~i~~nG~~i~~~~~~~i~   78 (285)
T d1nrwa_           1 MKLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEP-L-GIKTWVISANGAVIHDPEGRLYH   78 (285)
T ss_dssp             CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGG-G-TCCCEEEEGGGTEEECTTCCEEE
T ss_pred             CeEEEEECCccccCCCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-h-CCCcEEEecCceeEEecCCceee
Confidence            689999999999999999999999999999999 99999999999988877765 2 2235899999999998 778888


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccceeccc-cc-----eecccCCCCChh------------------
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG-ML-----NISPIGRNCSQE------------------  140 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~------------------  140 (248)
                      ...+    +.+.+.++++.+..+.....+......|...... ..     .+..........                  
T Consensus        79 ~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (285)
T d1nrwa_          79 HETI----DKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYI  154 (285)
T ss_dssp             ECCC----CHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEEC
T ss_pred             eccC----CHHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccceee
Confidence            8776    5889999999988863221111111111100000 00     000000000000                  


Q ss_pred             -hhhhhhhcc---------ccccchHHHHHHHHH--HcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCE
Q 038498          141 -ERDEFERYD---------KIHNIRPKMVSVLRE--KFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEI  203 (248)
Q Consensus       141 -~~~~~~~~~---------~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~  203 (248)
                       ........+         ......+........  ..++  +.+..+++.++||+|+++||+.|+++|++     ++++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~v  232 (285)
T d1nrwa_         155 NSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAED--LTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEET  232 (285)
T ss_dssp             SCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTT--EEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred             chHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCC--eEEEEeCCcEEEEecccchhhhHHHHHHhhcccCcccE
Confidence             000000000         001112223222222  2244  44444478999999999999999999997     7799


Q ss_pred             EEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          204 HFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       204 ~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ++|||    +.||++||+.+| +||||+||+|++|++|++|+++
T Consensus       233 i~~GD----~~ND~~Ml~~a~-~svam~na~~~~k~~A~~v~~~  271 (285)
T d1nrwa_         233 AAVGD----SLNDKSMLEAAG-KGVAMGNAREDIKSIADAVTLT  271 (285)
T ss_dssp             EEEES----SGGGHHHHHHSS-EEEECTTCCHHHHHHCSEECCC
T ss_pred             EEEeC----CHHHHHHHHhCC-eEEEeCCCCHHHHHhCCEEcCC
Confidence            99999    999999999999 9999999999999999999864

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-36  Score=250.53  Aligned_cols=232  Identities=17%  Similarity=0.229  Sum_probs=156.7

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe--CC
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--DG   80 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--~~   80 (248)
                      +.+|||+||+||||+++++.+++++.++|++|+++ +.++++|||++..+.+.+... +..+.+++|++||+.+++  ++
T Consensus         2 ~~iKli~~DlDGTL~~~~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~   81 (271)
T d1rkqa_           2 LAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG   81 (271)
T ss_dssp             CCCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred             CCeeEEEEeCCccccCCCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCC
Confidence            45899999999999999999999999999999999 999999999998766544431 234457899999999997  67


Q ss_pred             cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceecccc--------ceeccc-CCCCCh-hhhhhhhhccc
Q 038498           81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM--------LNISPI-GRNCSQ-EERDEFERYDK  150 (248)
Q Consensus        81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~-~~~~~~~~~~~  150 (248)
                      +.++...+    +.+.++.+.+.+...............+.......        ....+. ...... .....+.....
T Consensus        82 ~~i~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (271)
T d1rkqa_          82 STVAQTAL----SYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMM  157 (271)
T ss_dssp             CEEEECCB----CHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEE
T ss_pred             eEEEeecc----cHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEE
Confidence            88888876    47888888887777633221111111111110000        000000 000000 00000000000


Q ss_pred             c--ccchHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhh
Q 038498          151 I--HNIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFES  222 (248)
Q Consensus       151 ~--~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~  222 (248)
                      .  ....+.....+.+.++ .+.+...  ++.++||+|+++||+.|+++|++     .+++++|||    +.||++||+.
T Consensus       158 ~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD----~~ND~~ml~~  231 (271)
T d1rkqa_         158 IDEPAILDQAIARIPQEVKEKYTVLKS--APYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGD----QENDIAMIEY  231 (271)
T ss_dssp             ECCHHHHHHHHHHSCHHHHHHEEEEEE--ETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHH
T ss_pred             ecCHHHHHHHHHHHHHHhhcceEEEEe--cCceEEecCCCCCcccccceehhhcccchhcEEEEeC----cHhHHHHHHh
Confidence            0  0111222223333332 2334333  57899999999999999999997     778999999    9999999999


Q ss_pred             CCCceEEccCchhhHHHHhhhhccC
Q 038498          223 ERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       223 ~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +| +|+||+||++++|+.|++|++.
T Consensus       232 ~~-~~~am~na~~~lk~~a~~i~~~  255 (271)
T d1rkqa_         232 AG-VGVAVDNAIPSVKEVANFVTKS  255 (271)
T ss_dssp             SS-EEEECTTSCHHHHHHCSEECCC
T ss_pred             CC-cEEEeCCCCHHHHHhCCEEcCC
Confidence            99 9999999999999999999864

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-36  Score=250.19  Aligned_cols=228  Identities=16%  Similarity=0.187  Sum_probs=152.7

Q ss_pred             ceEEEEecCCCCCCCCCCCC-HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEE
Q 038498            7 GLLALFDVDGTLTAPRKAAT-PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIG   84 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~-~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~   84 (248)
                      +|+|+||+||||+++++.++ ++++++|++|+++ +.++++|||++..+.+.++. + ....++|++||+.+++.++.++
T Consensus         2 IKli~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~-l-~~~~~~i~~nGa~i~~~~~~~~   79 (269)
T d1rlma_           2 VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPE-L-KDEISFVAENGALVYEHGKQLF   79 (269)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTT-T-TTTSEEEEGGGTEEEETTEEEE
T ss_pred             EEEEEEeCCccCcCCCCcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-h-CcccceEeeceeEEEECCcEEE
Confidence            79999999999999888775 6799999999999 99999999999988777765 2 2234899999999999887777


Q ss_pred             EeecccccchHHHHHHHHHHHH-hhccccccccccccceecccc--c----eecccCCCCC-hhhhh-hhhhc--ccccc
Q 038498           85 TQSLKSFLGGEKLKEFINFTLH-YIADLDIPIKRGTFIEFRSGM--L----NISPIGRNCS-QEERD-EFERY--DKIHN  153 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~-~~~~~-~~~~~--~~~~~  153 (248)
                      ...+.    .+.....+..+.+ ...........+.|.......  .    .......... ..... .+..+  .....
T Consensus        80 ~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (269)
T d1rlma_          80 HGELT----RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDE  155 (269)
T ss_dssp             ECCCC----HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGG
T ss_pred             Eeccc----hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHH
Confidence            66553    4444444433333 211111111122222111000  0    0000000000 00000 00000  00112


Q ss_pred             chHHHHHHHHHHcCC-ceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498          154 IRPKMVSVLREKFAH-LNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVG  227 (248)
Q Consensus       154 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~  227 (248)
                      ......+.+...+.. +....+  +..++||+|+++||+.|+++|++     ++++++|||    |.||++||+.+| +|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD----~~ND~~Ml~~ag-~~  228 (269)
T d1rlma_         156 QIPLVIDKLHVALDGIMKPVTS--GFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGD----SGNDAEMLKMAR-YS  228 (269)
T ss_dssp             GHHHHHHHHHHHTTTSSEEEEC--STTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHCS-EE
T ss_pred             HHHHHHHHHHHHhhcceEEEEE--cCceEEEecCchHHHHHHHHHhhhhccccccEEEEcC----CcchHHHHHhCC-eE
Confidence            333455566666653 334333  67899999999999999999997     789999999    999999999999 99


Q ss_pred             EEccCchhhHHHHhhhhccC
Q 038498          228 HTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       228 ~av~Na~~~~k~~A~~v~~~  247 (248)
                      +||+||+|++|++|++|++.
T Consensus       229 vam~Na~~~lk~~A~~v~~~  248 (269)
T d1rlma_         229 FAMGNAAENIKQIARYATDD  248 (269)
T ss_dssp             EECTTCCHHHHHHCSEECCC
T ss_pred             EEeCCCCHHHHHhCCEEcCC
Confidence            99999999999999999964

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-34  Score=231.53  Aligned_cols=231  Identities=53%  Similarity=0.935  Sum_probs=145.1

Q ss_pred             eEEE-EecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccc--cCCCceEEecCCcEEEeCCcEEE
Q 038498            8 LLAL-FDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTV--IDEYDYVFSENGLVAHKDGKLIG   84 (248)
Q Consensus         8 kli~-~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~--~~~~~~~i~~nGa~i~~~~~~i~   84 (248)
                      |+|+ |||||||+++++.++++++++|++++++..++++|||++......+...+  .....++++.||+.++..++.+.
T Consensus         1 k~i~lFDlDGTLl~~~~~is~~~~~~i~~l~~~g~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   80 (244)
T d2fuea1           1 RVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLS   80 (244)
T ss_dssp             CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTEECC
T ss_pred             CEEEEEccccCccCCCCcCCHHHHHHHHHHHhCCCEEEEecCChhhhhhhhhhhhccccccceeecccceeeccCCccce
Confidence            4555 69999999999999999999999998883355677777776655554321  12346899999999999887776


Q ss_pred             EeecccccchHHHHHHHHHHHHhh----ccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHH
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYI----ADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVS  160 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (248)
                      .+.+.    ...............    ...........+........................+...........+...
T Consensus        81 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (244)
T d2fuea1          81 KQTIQ----NHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVE  156 (244)
T ss_dssp             CCCHH----HHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             eechh----HHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHHHHH
Confidence            66553    232222322222211    1100000111111111111111111111111111111111111112333444


Q ss_pred             HHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCC----CCHHHHhhCCCceEEccCch
Q 038498          161 VLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGG----NDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       161 ~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~----NDi~M~~~~g~~~~av~Na~  234 (248)
                      .+..............+..++||+|+++|||+||++|++  .+++++|||    +.    ||++||+.+|+.++||+||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~~~~~ev~afGD----~~~~G~ND~eml~~a~~~~~av~na~  232 (244)
T d2fuea1         157 ALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGN----ETSPGGNDFEIFADPRTVGHSVVSPQ  232 (244)
T ss_dssp             HHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEES----CCSTTSTTHHHHHSTTSEEEECSSHH
T ss_pred             HHHHHhhccceeEeeccCccceecchhccHHHHHHHHhcCChhhEEEEcC----CCCCCCCcHHHHHcCCCcEEEcCCHH
Confidence            555555443344444468899999999999999999998  889999999    75    99999999986799999999


Q ss_pred             hhHHHHhhhhcc
Q 038498          235 DTMEKCKALFLA  246 (248)
Q Consensus       235 ~~~k~~A~~v~~  246 (248)
                      +++|.+|+++++
T Consensus       233 ~~~k~~~~~~~~  244 (244)
T d2fuea1         233 DTVQRCREIFFP  244 (244)
T ss_dssp             HHHHHHHHHHCT
T ss_pred             HHHHHHHHhcCC
Confidence            999999999874

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=100.00  E-value=9.2e-34  Score=235.46  Aligned_cols=232  Identities=15%  Similarity=0.158  Sum_probs=161.0

Q ss_pred             ccceEEEEecCCCCCC-CCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc----ccCCCceEEecCCcEEEe
Q 038498            5 KQGLLALFDVDGTLTA-PRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT----VIDEYDYVFSENGLVAHK   78 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~----~~~~~~~~i~~nGa~i~~   78 (248)
                      ..+|+|+|||||||+. .++.++++++++|++|+++ +.++++|||++..+.+.+...    ......+.|+.||+.+++
T Consensus         8 ~~ikli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~   87 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYD   87 (283)
T ss_dssp             CCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEEC
T ss_pred             cCccEEEEECCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEEc
Confidence            5789999999999984 4678999999999999999 999999999998877655531    112234678999999998


Q ss_pred             -CCcEEEEeecccccchHHHHHHHHHHHHhhccccccc--cccccceeccccce----ecccCCCCChhhhhhhh--hcc
Q 038498           79 -DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPI--KRGTFIEFRSGMLN----ISPIGRNCSQEERDEFE--RYD  149 (248)
Q Consensus        79 -~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~  149 (248)
                       .++.+....+    +.+...++++.+..+........  ....|.........    .................  .+.
T Consensus        88 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (283)
T d2b30a1          88 QIGYTLLDETI----ETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMN  163 (283)
T ss_dssp             TTCCEEEECCC----CHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCS
T ss_pred             CCCcEeeeccc----CHHHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhcccce
Confidence             6777777766    57888888888877533222111  11112111110000    00000000000000000  000


Q ss_pred             -----ccccchHHHHHHHHHHcCC-ceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHH
Q 038498          150 -----KIHNIRPKMVSVLREKFAH-LNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHE  218 (248)
Q Consensus       150 -----~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~  218 (248)
                           ...+..+.+...+.+.++. ..+..+  +..++|+.|++++|+.|++.+++     .+++++|||    +.||++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD----~~ND~~  237 (283)
T d2b30a1         164 KLMIVLDPSESKTVIGNLKQKFKNKLTIFTT--YNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGD----AENDIA  237 (283)
T ss_dssp             EEEECCCTTTHHHHHHHHHHHSTTTEEEEEC--TTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEEC----SGGGHH
T ss_pred             EEEEecCHHHHHHHHHHHHHHhcccceEEEe--cceeEeecCCcchhHHHHHHHhhhcccccceEEEecC----ChhhHH
Confidence                 0123455677788888764 333333  67899999999999999999997     779999999    999999


Q ss_pred             HHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          219 IFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       219 M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ||+.+| +++||+||+|++|++|++|+.+
T Consensus       238 Ml~~a~-~~va~~na~~~~k~~a~~v~~~  265 (283)
T d2b30a1         238 MLSNFK-YSFAVANATDSAKSHAKCVLPV  265 (283)
T ss_dssp             HHHSCS-EEEECTTCCHHHHHHSSEECSS
T ss_pred             HHHhCC-cEEEeCCCCHHHHHhCCEEECC
Confidence            999999 9999999999999999999854

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-33  Score=226.40  Aligned_cols=235  Identities=56%  Similarity=0.941  Sum_probs=148.7

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGT   85 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~   85 (248)
                      ++||++|||||||+++++.++++++++|++|+++..++++|||++....+.+.......+.++++.||+.++..++.++.
T Consensus         2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l~~~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCR   81 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTEEEEE
T ss_pred             CCEEEEEcCcCCeeCCCCcCCHHHHHHHHHHHcCCCEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCCcccee
Confidence            57999999999999999999999999999998775588999999988777666532333446666677777778999888


Q ss_pred             eecccccchHHHHHHHHHHHHhhcccc----ccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHH
Q 038498           86 QSLKSFLGGEKLKEFINFTLHYIADLD----IPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSV  161 (248)
Q Consensus        86 ~~~~~~i~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (248)
                      ..++    .+....++...........    .......+........................+..........+.....
T Consensus        82 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (243)
T d2amya1          82 QNIQ----SHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVAD  157 (243)
T ss_dssp             CCHH----HHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             cchh----HHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHHH
Confidence            8764    3444444433333211100    0000001111111111111111111111111111111112233455566


Q ss_pred             HHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498          162 LREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK  239 (248)
Q Consensus       162 l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~  239 (248)
                      +.+.++...+....++..++|++|+++||+.|+++|++  .+++++|||.++.|.||++||+++|..+++|.| ++++|+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~-~~~~~~  236 (243)
T d2amya1         158 LRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA-PEDTRR  236 (243)
T ss_dssp             HHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS-HHHHHH
T ss_pred             HHHHhcccceEEEecCCccceeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC-HHHHHH
Confidence            67766543344444468899999999999999999997  889999999555566999999999855777777 577888


Q ss_pred             Hhhhhc
Q 038498          240 CKALFL  245 (248)
Q Consensus       240 ~A~~v~  245 (248)
                      +|+.++
T Consensus       237 ~~~~l~  242 (243)
T d2amya1         237 ICELLF  242 (243)
T ss_dssp             HHHHHC
T ss_pred             HHHHHh
Confidence            888765

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.98  E-value=9.1e-32  Score=216.62  Aligned_cols=204  Identities=16%  Similarity=0.121  Sum_probs=143.3

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIG   84 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~   84 (248)
                      |+|+|+||+||||+++.+.++++++++|++|+++ +.|+++|||++..+.+.+...  ....++++.||+.++..+....
T Consensus         1 kiK~i~~D~DGTL~~~~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~--~~~~~~i~~~g~~~~~~~~~~~   78 (230)
T d1wr8a_           1 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILI--GTSGPVVAEDGGAISYKKKRIF   78 (230)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHH--TCCSCEEEGGGTEEEETTEEEE
T ss_pred             CceEEEEecCCCCcCCCCccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhc--CCCcccccccceeeeccccccc
Confidence            6899999999999999999999999999999999 999999999998776655541  1234789999999998766555


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccce-eccccceecccCCCCChhhhhhhhhccccccchHHHHHHHH
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIE-FRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLR  163 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  163 (248)
                      ...+.    .+.  .+...+.........     .+.. .+.....                  +.......+. ...+.
T Consensus        79 ~~~~~----~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~------------------~~~~~~~~~~-~~~~~  128 (230)
T d1wr8a_          79 LASMD----EEW--ILWNEIRKRFPNART-----SYTMPDRRAGLV------------------IMRETINVET-VREII  128 (230)
T ss_dssp             SCCCS----HHH--HHHHHHHHHCTTCCB-----CTTGGGCSSCEE------------------ECTTTSCHHH-HHHHH
T ss_pred             ccccc----HHH--HHHHHHHHhcccccc-----eeecccceeeEE------------------EecccccHHH-HHHHH
Confidence            44432    222  123333332111100     0100 0000000                  0000111222 23444


Q ss_pred             HHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHH
Q 038498          164 EKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTME  238 (248)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k  238 (248)
                      ++++..-....  +...+|++|++.+|+.|++.+++     ++++++|||    +.||++||+.+| +++||+||+|.+|
T Consensus       129 ~~~~~~~~~~~--~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD----~~NDi~ml~~ag-~~vav~na~~~~k  201 (230)
T d1wr8a_         129 NELNLNLVAVD--SGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD----GENDLDAFKVVG-YKVAVAQAPKILK  201 (230)
T ss_dssp             HHTTCSCEEEE--CSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC----SGGGHHHHHHSS-EEEECTTSCHHHH
T ss_pred             HHhccceEEee--CCcEEEEeeCCcCcchhhcccccccccchhheeeeec----CccHHHHHHHCC-eEEEECCCCHHHH
Confidence            55543113333  46889999999999999999996     789999999    999999999999 9999999999999


Q ss_pred             HHhhhhccCC
Q 038498          239 KCKALFLAKP  248 (248)
Q Consensus       239 ~~A~~v~~~~  248 (248)
                      +.|++|++.+
T Consensus       202 ~~A~~v~~~~  211 (230)
T d1wr8a_         202 ENADYVTKKE  211 (230)
T ss_dssp             TTCSEECSSC
T ss_pred             HhCCEEECCC
Confidence            9999998653

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=6.7e-32  Score=217.08  Aligned_cols=205  Identities=18%  Similarity=0.186  Sum_probs=133.4

Q ss_pred             eEEEEecCCCCCCC-----CCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcE
Q 038498            8 LLALFDVDGTLTAP-----RKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKL   82 (248)
Q Consensus         8 kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~   82 (248)
                      .||+|||||||++.     .+.++++++++|++|++.+.|+++|||++..+.+....     .+++++.||+.++.++..
T Consensus         1 ~Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~~~~v~i~TGR~~~~l~~~~~~-----~~~~~~~ng~~~~~~~~~   75 (229)
T d1u02a_           1 SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPL-----DINMICYHGACSKINGQI   75 (229)
T ss_dssp             CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCS-----SCEEEEGGGTEEEETTEE
T ss_pred             CEEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhhCCCEEEEcCCCHHHhhhhcCc-----cccEEecCeEEEecCCce
Confidence            48999999999973     34699999999999976677999999999888776653     468999999999998877


Q ss_pred             EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHH
Q 038498           83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVL  162 (248)
Q Consensus        83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  162 (248)
                      ......+  ...+.++++.+.+......     ..+.+...+......  .....             .....+...+.+
T Consensus        76 ~~~~~~~--~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~-------------~~~~~~~~~~~l  133 (229)
T d1u02a_          76 VYNNGSD--RFLGVFDRIYEDTRSWVSD-----FPGLRIYRKNLAVLY--HLGLM-------------GADMKPKLRSRI  133 (229)
T ss_dssp             EECTTGG--GGHHHHHHHHHHHTTHHHH-----STTCEEEEETTEEEE--ECTTS-------------CSTTHHHHHHHH
T ss_pred             eeecchh--hhHHHHHHHHHHhHHhhcc-----cCCceecccccceee--eehhh-------------hhhhHHHHHHHH
Confidence            6554332  2334445555444432111     112222221111111  00000             001111222233


Q ss_pred             HHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhh
Q 038498          163 REKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKA  242 (248)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~  242 (248)
                      .+.+....+.+.. +..++||+|+++||+.|+++|++.+++++|||    |.||++||+.++ .|++|+|+..  +..|+
T Consensus       134 ~~~~~~~~~~~~~-~~~~idi~p~g~~Kg~al~~l~~~~~~i~~GD----s~ND~~Mf~~~~-~~~av~~g~~--~~~A~  205 (229)
T d1u02a_         134 EEIARIFGVETYY-GKMIIELRVPGVNKGSAIRSVRGERPAIIAGD----DATDEAAFEAND-DALTIKVGEG--ETHAK  205 (229)
T ss_dssp             HHHHHHHTCEEEE-CSSEEEEECTTCCHHHHHHHHHTTSCEEEEES----SHHHHHHHHTTT-TSEEEEESSS--CCCCS
T ss_pred             HHHhhcCCeEEEe-eceEEEEecCCCCHHHHHHHHhccccceeecC----CCChHHHHhccC-CeEEEEeCCC--CccCe
Confidence            3322111133333 57899999999999999999999899999999    999999999997 7777766543  34666


Q ss_pred             hhccC
Q 038498          243 LFLAK  247 (248)
Q Consensus       243 ~v~~~  247 (248)
                      ++++.
T Consensus       206 ~~~~~  210 (229)
T d1u02a_         206 FHVAD  210 (229)
T ss_dssp             EEESS
T ss_pred             EEcCC
Confidence            66543

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=3.3e-31  Score=214.03  Aligned_cols=203  Identities=19%  Similarity=0.250  Sum_probs=139.3

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIG   84 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~   84 (248)
                      .+|+|+||+||||+++.+.+++++.++|++|.++ +.++++|||++..+......  ...-.++|+.||+.+++....+.
T Consensus         2 miKli~~D~DGTL~~~~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~--~~~~~~~i~~~G~~~~~~~~~~~   79 (225)
T d1l6ra_           2 MIRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIF--LGINGPVFGENGGIMFDNDGSIK   79 (225)
T ss_dssp             CCCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH--HTCCSCEEEGGGTEEECTTSCEE
T ss_pred             CeEEEEEecCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHH--cCCCceEEeecceEEEeCCccEE
Confidence            5799999999999999999999999999999999 99999999999754443332  11124789999999998554443


Q ss_pred             EeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHH
Q 038498           85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLRE  164 (248)
Q Consensus        85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  164 (248)
                      . .+    ..+.+.+.++.+........+.  ...+              +...       ..+.......+.....+..
T Consensus        80 ~-~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------~~~~-------~~~~~~~~~~~~~~~~~~~  131 (225)
T d1l6ra_          80 K-FF----SNEGTNKFLEEMSKRTSMRSIL--TNRW--------------REAS-------TGFDIDPEDVDYVRKEAES  131 (225)
T ss_dssp             E-SS----CSHHHHHHHHHHTTTSSCBCCG--GGGG--------------CSSS-------EEEBCCGGGHHHHHHHHHT
T ss_pred             E-ec----ChHHHHHHHHHHHHhcCcceee--cccc--------------eeee-------eccccCHHHHHHHHHHHhh
Confidence            3 23    2455555554444321110000  0000              0000       0000011112222222222


Q ss_pred             HcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498          165 KFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK  239 (248)
Q Consensus       165 ~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~  239 (248)
                        ..+.+..   +...+++.|++.+|+.|+++|++     ++++++|||    |.||++||+.+| ++|||+||.|++|+
T Consensus       132 --~~~~i~~---~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GD----s~nD~~m~~~a~-~~vav~na~~~~k~  201 (225)
T d1l6ra_         132 --RGFVIFY---SGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD----SNNDMPMFQLPV-RKACPANATDNIKA  201 (225)
T ss_dssp             --TTEEEEE---ETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC----SGGGHHHHTSSS-EEEECTTSCHHHHH
T ss_pred             --cCcEEEE---CCcEEEecCCccchHHHHHHHhhhhccchhheeeecC----CcchHHHHHHCC-eEEEECCCcHHHHH
Confidence              2332332   35689999999999999999996     788999999    999999999999 99999999999999


Q ss_pred             HhhhhccCC
Q 038498          240 CKALFLAKP  248 (248)
Q Consensus       240 ~A~~v~~~~  248 (248)
                      .|++|+.+|
T Consensus       202 ~ad~v~~~~  210 (225)
T d1l6ra_         202 VSDFVSDYS  210 (225)
T ss_dssp             HCSEECSCC
T ss_pred             hCCEEECCC
Confidence            999999775

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.97  E-value=1.3e-31  Score=218.79  Aligned_cols=210  Identities=18%  Similarity=0.176  Sum_probs=132.1

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI   83 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i   83 (248)
                      ++..+|+|||||||+++++.+  +..+++.+++++ +.|+++|||++.++.+.+...-...++++|++||+.+++.....
T Consensus         1 m~~~li~~DlDGTL~~~~~~~--~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~   78 (244)
T d1s2oa1           1 MRQLLLISDLDNTWVGDQQAL--EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLD   78 (244)
T ss_dssp             CCSEEEEECTBTTTBSCHHHH--HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEEC
T ss_pred             CCceEEEEECcccCCCCCCCH--HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcc
Confidence            356799999999999876533  556778888888 99999999999887665554211235689999999999844321


Q ss_pred             --EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHH
Q 038498           84 --GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSV  161 (248)
Q Consensus        84 --~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (248)
                        ....+.    ......++..+.........      +.............            ...+......+.+...
T Consensus        79 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~  136 (244)
T d1s2oa1          79 QHWADYLS----EHWQRDILQAIADGFEALKP------QSPLEQNPWKISYH------------LDPQACPTVIDQLTEM  136 (244)
T ss_dssp             HHHHHHHH----TTCCHHHHHHHHHTCTTEEE------CCGGGCBTTBEEEE------------ECTTSCTHHHHHHHHH
T ss_pred             hHHHHHHH----HHHhHHHHHHHHhhcccccc------cChhhhcceEEEEe------------ccccccHHHHHHHHHH
Confidence              011111    11111112212221000000      00000000000000            0001112223344444


Q ss_pred             HHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhh
Q 038498          162 LREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDT  236 (248)
Q Consensus       162 l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~  236 (248)
                      +.+..........  +...+|++|++++|+.|+++|++     .+++++|||    +.||++||+.+| ++|+|+||+++
T Consensus       137 ~~~~~~~~~~~~~--~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~~GD----~~ND~~Ml~~~~-~~vav~na~~~  209 (244)
T d1s2oa1         137 LKETGIPVQVIFS--SGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGD----SGNDIGLFETSA-RGVIVRNAQPE  209 (244)
T ss_dssp             HHTSSCCEEEEEE--TTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEEC----SGGGHHHHTSSS-EEEECTTCCHH
T ss_pred             HHhhcccceeeec--CCcEEEEEeCccchhHHHHHHHHhccCChhhEEEEcC----CCCCHHHHhhCC-cEEEeCCCCHH
Confidence            4444444334334  46789999999999999999997     678999999    999999999999 99999999999


Q ss_pred             HHHHhhhhc
Q 038498          237 MEKCKALFL  245 (248)
Q Consensus       237 ~k~~A~~v~  245 (248)
                      +|+.|+.++
T Consensus       210 lk~~a~~~~  218 (244)
T d1s2oa1         210 LLHWYDQWG  218 (244)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHhhccc
Confidence            999999654

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.1e-30  Score=210.36  Aligned_cols=213  Identities=15%  Similarity=0.103  Sum_probs=121.9

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCc---
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGK---   81 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~---   81 (248)
                      +..+|||||||||+++++.++++++++|++|+++ +.++++|||++.++.+.+.. +.....++|+.||+.++....   
T Consensus         3 ~~~li~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~-~~~~~~~~i~~nGa~i~~~~~~~~   81 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKT-LGLQGLPLIAENGAVIQLAEQWQE   81 (232)
T ss_dssp             CCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHH-TTCTTSCEEEGGGTEEECCTTCTT
T ss_pred             CCEEEEEECCCCccCCcCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHH-hccCCceEEccCCeEEEecCCccc
Confidence            3459999999999999889999999999999999 99999999999887776665 222234799999999997322   


Q ss_pred             ----EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhh-hhhhhccccccchH
Q 038498           82 ----LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEER-DEFERYDKIHNIRP  156 (248)
Q Consensus        82 ----~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  156 (248)
                          ......    .....+........... ......   ........................ ..+.... ......
T Consensus        82 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  152 (232)
T d1xvia_          82 IDGFPRIISG----ISHGEISLVLNTLREKE-HFKFTT---FDDVDDATIAEWTGLSRSQAALTQLHEASVTL-IWRDSD  152 (232)
T ss_dssp             STTTTEEECS----SCHHHHHHHHHHHHHHH-CCCEEE---GGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEE-EECSCH
T ss_pred             cchhhhhhhH----HHHHHHHHhhhhhhhhh-cccccc---ccchhhhhhhhhhcccchhhhhhhhcceeeee-cccccH
Confidence                111111    12222221111111110 000000   000000000000000000000000 0000000 000111


Q ss_pred             HHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhhCCCceE
Q 038498          157 KMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFESERTVGH  228 (248)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~~g~~~~  228 (248)
                      .....+............. +...++++|.+++|+.|++.|++        .+++++|||    +.||++||+.+| +||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD----~~NDl~Ml~~a~-~~v  226 (232)
T d1xvia_         153 ERMAQFTARLNELGLQFMQ-GARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGD----GPNDAPLLEVMD-YAV  226 (232)
T ss_dssp             HHHHHHHHHHHHTTEEEEE-CSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEES----SGGGHHHHHTSS-EEE
T ss_pred             HHHHHHHHHhhhccceeee-ccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcC----CHhHHHHHHhCC-eEE
Confidence            1111111111111133332 35689999999999999999985        678999999    999999999999 999


Q ss_pred             EccCch
Q 038498          229 TVTSPE  234 (248)
Q Consensus       229 av~Na~  234 (248)
                      +|.||+
T Consensus       227 aV~n~~  232 (232)
T d1xvia_         227 IVKGLN  232 (232)
T ss_dssp             ECCCCC
T ss_pred             EEeCCC
Confidence            999984

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.96  E-value=1.7e-30  Score=210.91  Aligned_cols=218  Identities=15%  Similarity=0.005  Sum_probs=126.8

Q ss_pred             cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEE
Q 038498            6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLI   83 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i   83 (248)
                      .+|+|||||||||+++.  .+++++++|++|+++ +.|++||||++..+.+.+...  ....++|+.||+.+++ +++..
T Consensus         1 miKli~~DlDGTLl~~~--~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~--~~~~~~i~~nGa~i~~~~~~~~   76 (243)
T d1wzca1           1 MIRLIFLDIDKTLIPGY--EPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKEL--EVETPFISENGSAIFIPKGYFP   76 (243)
T ss_dssp             CEEEEEECCBTTTBSSS--CSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHH--TCCSCEEETTTTEEEECTTCCC
T ss_pred             CcEEEEEeCCCCCCCCC--CCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHh--cccccccccCCcEEEcCCCcee
Confidence            37999999999999754  378899999999999 999999999998776655551  1234799999999998 33322


Q ss_pred             EEeecccc---------cchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhh-hhhhhhcccccc
Q 038498           84 GTQSLKSF---------LGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEE-RDEFERYDKIHN  153 (248)
Q Consensus        84 ~~~~~~~~---------i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  153 (248)
                      ........         ...+.+...+............       ..................... .........+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (243)
T d1wzca1          77 FDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYY-------GNSTKEEIEKFTGMPPELVPLAMEREYSETIFEW  149 (243)
T ss_dssp             ----------CEEEECSCCHHHHHHHHHHHHHHHTCBCG-------GGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBC
T ss_pred             cccchhHHHHHHHHHHhhhHHHHHHHHHhhhhhcccchh-------hhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhh
Confidence            11111000         0112222222211111110000       000000000000000000000 000000000011


Q ss_pred             chHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc------cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498          154 IRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD------FNEIHFFGDKTYKGGNDHEIFESERTVG  227 (248)
Q Consensus       154 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~------~~~~~aiGD~~~~~~NDi~M~~~~g~~~  227 (248)
                      ..... ........   +....+  ..++++|++++|+.|++.+++      ++++++|||    +.||++||+++| ++
T Consensus       150 ~~~~~-~~~~~~~~---~~~~~~--~~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD----~~ND~~Ml~~a~-~~  218 (243)
T d1wzca1         150 SRDGW-EEVLVEGG---FKVTMG--SRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGD----SYNDFPMFEVVD-KV  218 (243)
T ss_dssp             SSSCH-HHHHHHTT---CEEEEC--SSSEEEECSCCHHHHHHHHHHHHHTTSCEEEEEEEC----SGGGHHHHTTSS-EE
T ss_pred             hhHHH-HHhhhhcC---eEEeec--ccccchhhhhccHHHHHHHHHHhcCCCcccEEEEcC----CHhHHHHHHcCC-cE
Confidence            11111 12223322   334432  458899999999999999986      579999999    999999999999 99


Q ss_pred             EEccCchhhHHHHhhhhc
Q 038498          228 HTVTSPEDTMEKCKALFL  245 (248)
Q Consensus       228 ~av~Na~~~~k~~A~~v~  245 (248)
                      +||+||++++|+.|+.|+
T Consensus       219 va~~Na~~~~~~~~~~i~  236 (243)
T d1wzca1         219 FIVGSLKHKKAQNVSSII  236 (243)
T ss_dssp             EEESSCCCTTCEEESCHH
T ss_pred             EEeCCCChHHHhhhhHHH
Confidence            999999999998888775

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=8e-18  Score=131.68  Aligned_cols=54  Identities=11%  Similarity=0.057  Sum_probs=41.3

Q ss_pred             CCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH-Hhhhhc
Q 038498          186 QGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK-CKALFL  245 (248)
Q Consensus       186 ~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~-~A~~v~  245 (248)
                      ....|+.+.+.+++     .++++||||    +.||++||+.|| .|||| ||.+++|+ +|++++
T Consensus       126 ~~~~~~~~~~~~~~~~~i~~~eviaiGD----g~NDi~Ml~~Ag-~gIAm-na~~~v~~~~~~~~~  185 (206)
T d1rkua_         126 YQLRQKDPKRQSVIAFKSLYYRVIAAGD----SYNDTTMLSEAH-AGILF-HAPENVIREFPQFPA  185 (206)
T ss_dssp             EECCSSSHHHHHHHHHHHTTCEEEEEEC----SSTTHHHHHHSS-EEEEE-SCCHHHHHHCTTSCE
T ss_pred             ccccchhhHHHHHHHhcccccceEEecC----CccCHHHHHhCC-ccEEE-CCCHHHHHhCCCcee
Confidence            34445555555553     899999999    999999999999 99999 77666665 446655

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.59  E-value=1.5e-17  Score=130.41  Aligned_cols=63  Identities=14%  Similarity=0.189  Sum_probs=56.1

Q ss_pred             EEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          180 SFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       180 ~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      ..+..+.+.+|..++..+++     ++++++|||    |.||++|++.|| .++|| ||.|.+|+.|++|+.+|
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGD----s~nDi~m~~~ag-~~va~-na~~~lk~~Ad~vi~~~  200 (210)
T d1j97a_         133 VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGD----GANDISMFKKAG-LKIAF-CAKPILKEKADICIEKR  200 (210)
T ss_dssp             EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEES----SGGGHHHHHHCS-EEEEE-SCCHHHHTTCSEEECSS
T ss_pred             ccccccccccccchhhhHHHHhcccccceEEecC----CcChHHHHHHCC-CCEEE-CCCHHHHHhCCEEEcCC
Confidence            44456677889999999886     889999999    999999999999 99999 99999999999999754

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.21  E-value=4.6e-12  Score=97.09  Aligned_cols=59  Identities=14%  Similarity=0.101  Sum_probs=54.7

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP  248 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~  248 (248)
                      ....+|..+++.+++     ++++++|||    +.||++||+.+| +++||+||++++|+.|++|+.++
T Consensus        76 ~~~~~K~~~l~~~~~~~~i~~~~v~~vGD----d~nDl~~l~~~g-~siap~nA~~~vk~~A~~Vt~~~  139 (177)
T d1k1ea_          76 LGKLEKETACFDLMKQAGVTAEQTAYIGD----DSVDLPAFAACG-TSFAVADAPIYVKNAVDHVLSTH  139 (177)
T ss_dssp             ESCSCHHHHHHHHHHHHTCCGGGEEEEEC----SGGGHHHHHHSS-EEEECTTSCHHHHTTSSEECSSC
T ss_pred             cccccHHHHHHHHHHHhcCCcceeEEecC----CccHHHHHhhCC-eEEEcCCccHHHHHhCCEEeCCC
Confidence            345799999999986     899999999    999999999999 99999999999999999999764

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.08  E-value=2.5e-10  Score=91.88  Aligned_cols=52  Identities=19%  Similarity=0.277  Sum_probs=42.9

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhcc
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGK   59 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~~   59 (248)
                      .|+|+||+||||++....+ +.+.++|++|+++ +.++++|+   |+...+.+.|..
T Consensus         2 yk~v~fDlDGTL~~~~~~i-~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~   57 (253)
T d1yv9a1           2 YQGYLIDLDGTIYLGKEPI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLAN   57 (253)
T ss_dssp             CCEEEECCBTTTEETTEEC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred             CCEEEEcCCCccEeCCCcC-ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHH
Confidence            6899999999999887777 7789999999999 99999975   555566666543

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=5.2e-10  Score=89.90  Aligned_cols=54  Identities=13%  Similarity=0.201  Sum_probs=44.8

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhcc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGK   59 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~   59 (248)
                      +++|+|+||+||||++....++ .+.++|++|+++ ++++++|   +|+..++.+.+..
T Consensus         1 M~ik~VifDlDGTL~~~~~~i~-~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~   58 (250)
T d2c4na1           1 MTIKNVICDIDGVLMHDNVAVP-GAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT   58 (250)
T ss_dssp             CCCCEEEEECBTTTEETTEECT-THHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCeeEECCCcCc-cHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhh
Confidence            4789999999999998877774 678999999999 9999987   6777777666543

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.99  E-value=5.4e-10  Score=90.18  Aligned_cols=53  Identities=21%  Similarity=0.260  Sum_probs=43.2

Q ss_pred             ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhc
Q 038498            5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLG   58 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~   58 (248)
                      +++|+|+||+||||++....+ +.+.++|++|+++ ..++++|.   |+...+.+.+.
T Consensus         5 ~~ik~vlFDlDGTL~~~~~~i-~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~   61 (261)
T d1vjra_           5 DKIELFILDMDGTFYLDDSLL-PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLR   61 (261)
T ss_dssp             GGCCEEEECCBTTTEETTEEC-TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHH
T ss_pred             HhCCEEEEeCCCeeEECCccC-chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHH
Confidence            589999999999999886666 6778999999999 99999984   55555555544

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.87  E-value=2.8e-10  Score=88.50  Aligned_cols=60  Identities=12%  Similarity=-0.007  Sum_probs=46.2

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC---chhhHHHH-hhhhccC
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS---PEDTMEKC-KALFLAK  247 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N---a~~~~k~~-A~~v~~~  247 (248)
                      .+.+-.|...+..+++     ++++++|||    +.||+.+.+.+|+.+++|..   ..+++.+. +++|..+
T Consensus       133 ~~~~~~~p~~~~~~~~~~~~~~~~~v~VGD----s~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~  201 (210)
T d2ah5a1         133 SPEAPHKADVIHQALQTHQLAPEQAIIIGD----TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK  201 (210)
T ss_dssp             CSSCCSHHHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS
T ss_pred             cccccccccccchhhhhhhcccccceeecC----CHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC
Confidence            3456778888888886     889999999    99999999999988999874   34445443 5666554

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=9.2e-10  Score=86.67  Aligned_cols=91  Identities=18%  Similarity=0.207  Sum_probs=60.8

Q ss_pred             cccchHHHHHHHHHHcCC--ce-----EEEEecCceEEEEe----eCCCCHHHHHHHhhc---cCCEEEEcCCCCCCCCC
Q 038498          151 IHNIRPKMVSVLREKFAH--LN-----LTFSIGGQISFDVF----PQGWDKTYCLRYLDD---FNEIHFFGDKTYKGGND  216 (248)
Q Consensus       151 ~~~~~~~~~~~l~~~~~~--~~-----~~~~~~~~~~~di~----~~~~~K~~al~~l~~---~~~~~aiGD~~~~~~ND  216 (248)
                      ++...+.+...+.+.++-  ..     +.+...|...-...    ..+..|+..++.+++   +++++++||    |.||
T Consensus       104 vS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGD----s~~D  179 (217)
T d1nnla_         104 ISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGD----GATD  179 (217)
T ss_dssp             EEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEES----SHHH
T ss_pred             ECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHHHhccCccccEEEEe----CHhh
Confidence            455556667777777641  11     11221122222111    335669999999875   789999999    9999


Q ss_pred             HHHHhhCCCceEEccC--chhhHHHHhhhhcc
Q 038498          217 HEIFESERTVGHTVTS--PEDTMEKCKALFLA  246 (248)
Q Consensus       217 i~M~~~~g~~~~av~N--a~~~~k~~A~~v~~  246 (248)
                      ++|++.+| .++|++.  ..+.+++.|+++..
T Consensus       180 i~~~~~ag-~~va~~~~~~~~~~~~~ad~~i~  210 (217)
T d1nnla_         180 MEACPPAD-AFIGFGGNVIRQQVKDNAKWYIT  210 (217)
T ss_dssp             HTTTTTSS-EEEEECSSCCCHHHHHHCSEEES
T ss_pred             HHHHHhCC-ceEEECCCHHHHHHHHhCCCEeC
Confidence            99999999 9999974  34577777777653

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.78  E-value=1.6e-08  Score=81.12  Aligned_cols=52  Identities=21%  Similarity=0.265  Sum_probs=42.5

Q ss_pred             ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhcc
Q 038498            7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGK   59 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~~   59 (248)
                      +|+|+||+||||++....+ +...++|+.|+++ +.++++|.   |+...+.+.+..
T Consensus         2 yk~vlFDlDGTL~~~~~~i-~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~   57 (253)
T d1wvia_           2 YKGYLIDLDGTIYKGKDRI-PAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLAT   57 (253)
T ss_dssp             CCEEEEECBTTTEETTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred             cCEEEEcCcCceEECCCcC-ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            6899999999999886665 7789999999999 99999985   455566666654

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.73  E-value=5.1e-09  Score=82.16  Aligned_cols=49  Identities=14%  Similarity=0.057  Sum_probs=38.8

Q ss_pred             CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498          188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK  241 (248)
Q Consensus       188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A  241 (248)
                      ..|...++.+.. ++++++|||    +.||++|++.|| .++|+++..+.+++..
T Consensus       148 ~~~~~~~~~~~~~~~~~i~iGD----s~~Dl~~a~~A~-~~~a~~~~~~~~~~~~  197 (226)
T d2feaa1         148 CCKPSVIHELSEPNQYIIMIGD----SVTDVEAAKLSD-LCFARDYLLNECREQN  197 (226)
T ss_dssp             SCHHHHHHHHCCTTCEEEEEEC----CGGGHHHHHTCS-EEEECHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCceEEEEeC----chhhHHHHHHCC-EEEEecchHHHHHHcC
Confidence            344455555443 889999999    999999999999 9999998777776654

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.51  E-value=7.6e-08  Score=70.45  Aligned_cols=45  Identities=27%  Similarity=0.423  Sum_probs=38.7

Q ss_pred             ccceEEEEecCCCCCCCCC------------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            5 KQGLLALFDVDGTLTAPRK------------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      .+.|+|+||+||||+++.+            .+-+.+++.|+.|+++ ++++++|||+
T Consensus         5 ~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            4679999999999987532            3467789999999999 9999999996

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=98.49  E-value=3.1e-07  Score=65.17  Aligned_cols=76  Identities=21%  Similarity=0.250  Sum_probs=53.9

Q ss_pred             ceEEEEecCCCCCCCCC------CCCHHHHHHHHHHhhc-CeEEEEcCCChH---------------HHHHHhcccccCC
Q 038498            7 GLLALFDVDGTLTAPRK------AATPQMLEFMRELRKV-VTVGVVGGSDLS---------------KISEQLGKTVIDE   64 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~-~~v~iaTGR~~~---------------~~~~~l~~~~~~~   64 (248)
                      +|.|+|||||||+...+      ...+.+++.|+.|.+. +.+++.|+|+..               ...++|... ..+
T Consensus         1 mK~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~-gI~   79 (124)
T d1xpja_           1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKH-QVP   79 (124)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHT-TCC
T ss_pred             CCEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHc-CCC
Confidence            46799999999997543      3578889999999999 999999999631               244555552 346


Q ss_pred             CceEEec---C-CcEEEeCCcEE
Q 038498           65 YDYVFSE---N-GLVAHKDGKLI   83 (248)
Q Consensus        65 ~~~~i~~---n-Ga~i~~~~~~i   83 (248)
                      +|-++..   . .+-+|.+.+.+
T Consensus        80 Yd~Li~gKP~~~~~d~yIDDkai  102 (124)
T d1xpja_          80 YDEILVGKPWCGHDGFYIDDRAV  102 (124)
T ss_dssp             CSEEEECCCCCCTTCEEECTTEE
T ss_pred             ceEEEECCCCCCCCCEEeeCCCC
Confidence            7777653   2 23456666555

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.45  E-value=1.9e-09  Score=83.65  Aligned_cols=40  Identities=13%  Similarity=-0.002  Sum_probs=31.2

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      -.+...++.+++     ++++++|||    +.+|+.+.+.+|+.++.+.
T Consensus       137 KP~p~~~~~~~~~~~~~~~~~l~VgD----s~~Di~~a~~aG~~~i~v~  181 (207)
T d2hdoa1         137 KPDPLPLLTALEKVNVAPQNALFIGD----SVSDEQTAQAANVDFGLAV  181 (207)
T ss_dssp             TTSSHHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHTCEEEEEG
T ss_pred             hhhhhhhcccccceeeeccceeEecC----CHHHHHHHHHcCCeEEEEe
Confidence            334555555554     889999999    9999999999997666665

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.40  E-value=3.1e-08  Score=77.65  Aligned_cols=29  Identities=17%  Similarity=0.155  Sum_probs=26.3

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      ++++++|||    +.+|+.+.+.+|+.+++|..
T Consensus       168 p~~~l~VGD----~~~Di~aA~~aG~~~i~v~~  196 (228)
T d2hcfa1         168 PSQIVIIGD----TEHDIRCARELDARSIAVAT  196 (228)
T ss_dssp             GGGEEEEES----SHHHHHHHHTTTCEEEEECC
T ss_pred             hhHheeecC----ChHHHHHHHHcCCEEEEEcC
Confidence            789999999    99999999999988888764

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=1.1e-08  Score=79.61  Aligned_cols=40  Identities=13%  Similarity=-0.050  Sum_probs=32.5

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      +....+.+++     ++++++|||    +.+|+.+.+.+|+.+++|...
T Consensus       146 ~~~~~~~~~~~l~~~~~~~l~igD----~~~di~aA~~~G~~~i~v~~~  190 (218)
T d1te2a_         146 HPQVYLDCAAKLGVDPLTCVALED----SVNGMIASKAARMRSIVVPAP  190 (218)
T ss_dssp             STHHHHHHHHHHTSCGGGEEEEES----SHHHHHHHHHTTCEEEECCCT
T ss_pred             hHHHHHHHHHHcCCCchhcEEEee----CHHHHHHHHHcCCEEEEECCC
Confidence            3345555554     899999999    999999999999888888664

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.31  E-value=4.3e-09  Score=82.05  Aligned_cols=46  Identities=24%  Similarity=0.150  Sum_probs=36.4

Q ss_pred             eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      .+...+|......+++     ++++++|||    +.+|+.+.+.+|+.+++|.++
T Consensus       147 ~~~~kp~p~~~~~~~~~~~~~~~~~~~igD----~~~Di~~A~~aG~~~i~v~~g  197 (224)
T d2hsza1         147 LPEIKPHPAPFYYLCGKFGLYPKQILFVGD----SQNDIFAAHSAGCAVVGLTYG  197 (224)
T ss_dssp             SSSCTTSSHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHHTCEEEEESSS
T ss_pred             cccccccchhhHHHHHHhhhhhhccchhcC----cHHHHHHHHHcCCeEEEEeCC
Confidence            3444556666666664     889999999    999999999999888888753

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.07  E-value=2.6e-06  Score=60.24  Aligned_cols=44  Identities=18%  Similarity=0.169  Sum_probs=36.6

Q ss_pred             EEEEecCCCCCCCCC----CCCHHHHHHHHHHhhc-CeEEEEcCCChHH
Q 038498            9 LALFDVDGTLTAPRK----AATPQMLEFMRELRKV-VTVGVVGGSDLSK   52 (248)
Q Consensus         9 li~~DlDGTLl~~~~----~i~~~~~~al~~l~~~-~~v~iaTGR~~~~   52 (248)
                      .|++||||||+..+.    ..-+.+++.|++|.++ +.+++.|||+...
T Consensus         2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~   50 (122)
T d2obba1           2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGEL   50 (122)
T ss_dssp             EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHH
T ss_pred             EEEEEcCCCcCCCCCCccccccHHHHHHHHHHHHCCCeEEEEecCCCcc
Confidence            589999999986542    2356789999999999 9999999998653

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.03  E-value=2.7e-06  Score=61.27  Aligned_cols=43  Identities=26%  Similarity=0.370  Sum_probs=31.5

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      ...++++||    +.||.++|+.++ .|++|+++.+..++.|+.|+-+
T Consensus        82 ~~~v~~vGD----g~nD~~aL~~Ad-vgia~~~~~~~~~~aADivl~~  124 (135)
T d2b8ea1          82 KEVVAFVGD----GINDAPALAQAD-LGIAVGSGSDVAVESGDIVLIR  124 (135)
T ss_dssp             TSCEEEEEC----SSSSHHHHHHSS-EEEEECCC--------SEEESS
T ss_pred             CCEEEEEeC----CCCcHHHHHhCC-eeeecCccCHHHHHhCCEEEEC
Confidence            456899999    999999999999 9999999999999999998743

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.91  E-value=1.2e-06  Score=67.81  Aligned_cols=39  Identities=5%  Similarity=-0.191  Sum_probs=32.2

Q ss_pred             HHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          192 YCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       192 ~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      ......++     ++++++|||    +.+|+.+.+.+|+.++++.++.
T Consensus       145 ~~~~~~~~~l~~~p~~~l~vgD----s~~dv~aA~~aG~~~i~v~~~~  188 (222)
T d2fdra1         145 DIFLHGAAQFGVSPDRVVVVED----SVHGIHGARAAGMRVIGFTGAS  188 (222)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHTTCEEEEECCST
T ss_pred             HHHHHHHHhhCCCCceEEEEcC----CHHHHHHHHHcCCEEEEEccCC
Confidence            44444443     889999999    9999999999998888898764

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=5.7e-06  Score=61.34  Aligned_cols=50  Identities=24%  Similarity=0.234  Sum_probs=38.8

Q ss_pred             cceEEEEecCCCCCCCC------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHH
Q 038498            6 QGLLALFDVDGTLTAPR------------------------KAATPQMLEFMRELRKV-VTVGVVGGSDLSKISE   55 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~   55 (248)
                      -.|+|+||+||||.+.-                        -.+-+.+.++|+.|+++ +.++++|+.+.....+
T Consensus         4 ~pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~   78 (164)
T d1u7pa_           4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGAN   78 (164)
T ss_dssp             CCSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHH
T ss_pred             CCCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhc
Confidence            36999999999997531                        02356789999999999 9999999877654433

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.89  E-value=2.2e-07  Score=72.80  Aligned_cols=52  Identities=8%  Similarity=-0.027  Sum_probs=36.5

Q ss_pred             HHHHHHhhc-----cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccC--chhhHHHHhhhhcc
Q 038498          191 TYCLRYLDD-----FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTS--PEDTMEKCKALFLA  246 (248)
Q Consensus       191 ~~al~~l~~-----~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~N--a~~~~k~~A~~v~~  246 (248)
                      ....+..++     ++++++|||    + .+|+.+.+.+|..++.+..  ........++++..
T Consensus       158 ~~~~~~~~~~l~~~p~~~l~vgD----~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~  217 (230)
T d1x42a1         158 PRIFELALKKAGVKGEEAVYVGD----NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS  217 (230)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEES----CTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES
T ss_pred             hHHHHHHHhhhcccccccceeec----CcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC
Confidence            344555543     889999999    9 5899999999977777743  44444445566543

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=97.88  E-value=2.8e-06  Score=67.32  Aligned_cols=29  Identities=17%  Similarity=0.014  Sum_probs=25.9

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      ++++++|||    +.+|+.+.+.+|+.+|+|.-
T Consensus       174 ~~~~v~VgD----s~~Di~aA~~aG~~ti~v~~  202 (257)
T d1swva_         174 MNHMIKVGD----TVSDMKEGRNAGMWTVGVIL  202 (257)
T ss_dssp             GGGEEEEES----SHHHHHHHHHTTSEEEEECT
T ss_pred             cceEEEEeC----ChhhHHHHHHCCCEEEEEcc
Confidence            578999999    99999999999988888854

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=5.3e-06  Score=64.60  Aligned_cols=49  Identities=18%  Similarity=0.045  Sum_probs=37.5

Q ss_pred             eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc---cCchhhH
Q 038498          185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV---TSPEDTM  237 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av---~Na~~~~  237 (248)
                      ..+-.+.......++     ++++++|||    +.+|+...+.+|+.++.|   +|+...-
T Consensus       181 ~~~KP~p~~~~~~~~~~~~~p~~~l~vgD----~~~dv~aA~~aG~~ti~v~r~g~~~~~~  237 (253)
T d1zs9a1         181 IGHKVESESYRKIADSIGCSTNNILFLTD----VTREASAAEEADVHVAVVVRPGNAGLTD  237 (253)
T ss_dssp             GCCTTCHHHHHHHHHHHTSCGGGEEEEES----CHHHHHHHHHTTCEEEEECCTTCCCCCH
T ss_pred             cccCCCcHHHHHHHHHhCCCcCcEEEEeC----CHHHHHHHHHcCCEEEEEeCCCCCCCch
Confidence            334555566666664     899999999    999999999999888887   5654433

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.71  E-value=3.1e-05  Score=58.20  Aligned_cols=37  Identities=16%  Similarity=0.031  Sum_probs=25.8

Q ss_pred             CCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhh
Q 038498          201 NEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKA  242 (248)
Q Consensus       201 ~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~  242 (248)
                      +++++|||    +.+|+.+.+.+|+.++.|. .....+++.+
T Consensus       150 ~~~l~vgD----s~~Di~aA~~aG~~~i~v~-~~~~~~~~~d  186 (187)
T d2fi1a1         150 SSGLVIGD----RPIDIEAGQAAGLDTHLFT-SIVNLRQVLD  186 (187)
T ss_dssp             SSEEEEES----SHHHHHHHHHTTCEEEECS-CHHHHHHHHT
T ss_pred             CCeEEEeC----CHHHHHHHHHcCCEEEEEC-CCCChHhhcC
Confidence            35778888    8888888888886666654 4555555443

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.71  E-value=5.8e-06  Score=63.02  Aligned_cols=42  Identities=17%  Similarity=0.141  Sum_probs=34.8

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      -.+....+.+++     ++++++|||    +.+|+.+.+.+|+.+++|.+.
T Consensus       137 Kp~~~~~~~~~~~~~~~p~~~l~VgD----~~~Di~~A~~~G~~~i~v~~~  183 (204)
T d2go7a1         137 KPSPEAATYLLDKYQLNSDNTYYIGD----RTLDVEFAQNSGIQSINFLES  183 (204)
T ss_dssp             TTSSHHHHHHHHHHTCCGGGEEEEES----SHHHHHHHHHHTCEEEESSCC
T ss_pred             chhHHHHHHHHHHhCCCCceEEEEeC----CHHHHHHHHHcCCeEEEEcCC
Confidence            345666666665     889999999    999999999999888888765

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.66  E-value=1.9e-05  Score=58.83  Aligned_cols=54  Identities=22%  Similarity=0.332  Sum_probs=49.0

Q ss_pred             CHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498          189 DKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK  247 (248)
Q Consensus       189 ~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~  247 (248)
                      +|..-++.|.+ ...+.++||    +.||.++|+.++ .|++|+++.+..|+.|++|+.+
T Consensus       101 ~K~~lv~~l~~~g~~Va~vGD----G~nD~~AL~~Ad-vGIa~~~gt~~a~~aAdivl~~  155 (168)
T d1wpga2         101 HKSKIVEYLQSYDEITAMTGD----GVNDAPALKKAE-IGIAMGSGTAVAKTASEMVLAD  155 (168)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEC----SGGGHHHHHHSS-EEEEETTSCHHHHHTCSEEETT
T ss_pred             HHHHHHHHHHhcccceeEEec----CCCCHHHHHhCC-EEEEeccccHHHHHhCCEEEcc
Confidence            68888888887 567999999    999999999999 9999999999999999998743

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=2.4e-05  Score=58.89  Aligned_cols=44  Identities=25%  Similarity=0.347  Sum_probs=37.2

Q ss_pred             cceEEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            6 QGLLALFDVDGTLTAPRK--------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      .+++||||+||||....+        ++-+.+.++|++|+++ +.++++|..+
T Consensus         1 ~~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~   53 (182)
T d2gmwa1           1 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQS   53 (182)
T ss_dssp             CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred             CCCEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhhcCchhhhhhccc
Confidence            378999999999975433        3466789999999999 9999999886

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=4.5e-05  Score=56.33  Aligned_cols=40  Identities=13%  Similarity=0.016  Sum_probs=34.5

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL  243 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~  243 (248)
                      ++++++|||    +..|+.+.+.+|+.++.+......-+.+++.
T Consensus       121 ~~~~~~IGD----~~~Di~aA~~aG~~~i~i~~~~~~~~~i~~~  160 (161)
T d2fpwa1         121 RANSYVIGD----RATDIQLAENMGINGLRYDRETLNWPMIGEQ  160 (161)
T ss_dssp             GGGCEEEES----SHHHHHHHHHHTSEEEECBTTTBCHHHHHHH
T ss_pred             hhcEEEECC----CHHHHHHHHHcCCeEEEECCCCCCHHHHHhh
Confidence            779999999    9999999999999999998776666666653

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.39  E-value=5.5e-05  Score=58.32  Aligned_cols=44  Identities=25%  Similarity=0.326  Sum_probs=36.4

Q ss_pred             ccceEEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498            5 KQGLLALFDVDGTLTAPRK--------AATPQMLEFMRELRKV-VTVGVVGGS   48 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~-~~v~iaTGR   48 (248)
                      .++++||||.||||..+.+        .+-+.+.++|++|+++ ++++++|-.
T Consensus        21 ~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ   73 (209)
T d2o2xa1          21 PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQ   73 (209)
T ss_dssp             SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHhhCCeEEEeccc
Confidence            4578999999999976533        3456789999999999 999999965

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=0.00034  Score=54.29  Aligned_cols=45  Identities=18%  Similarity=0.242  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHhhcCeEEEEcCCChHHHHHHhccc-ccCCCceEEec
Q 038498           27 PQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSE   71 (248)
Q Consensus        27 ~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~   71 (248)
                      +.+.++|++|++.+.++++|+.+...+...+... +...|+.++++
T Consensus       112 ~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s  157 (247)
T d2gfha1         112 DDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG  157 (247)
T ss_dssp             HHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred             ccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccc
Confidence            3456778888744888899987765433333321 23335665543

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.00033  Score=56.48  Aligned_cols=35  Identities=17%  Similarity=0.151  Sum_probs=27.4

Q ss_pred             eCCCCHHHHHHHhhc-------cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498          185 PQGWDKTYCLRYLDD-------FNEIHFFGDKTYKGGNDHEIFESE  223 (248)
Q Consensus       185 ~~~~~K~~al~~l~~-------~~~~~aiGD~~~~~~NDi~M~~~~  223 (248)
                      +...+|+.++.....       ..+++++||    |.||+.|...+
T Consensus       202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGD----s~~Dl~Ma~g~  243 (291)
T d2bdua1         202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGD----SQGDLRMADGV  243 (291)
T ss_dssp             CCTTCHHHHHHTTHHHHHHTTTCCEEEEEES----SSGGGGTTTTC
T ss_pred             cccccCcchhhhhHHHHhccCCcCcEEEEeC----CHhHHHHHhCC
Confidence            357788877755442       567999999    99999999854

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.09  E-value=0.00019  Score=54.52  Aligned_cols=44  Identities=30%  Similarity=0.446  Sum_probs=35.6

Q ss_pred             ccceEEEEecCCCCCCCCC-----------C-CCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498            5 KQGLLALFDVDGTLTAPRK-----------A-ATPQMLEFMRELRKV-VTVGVVGGS   48 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~-----------~-i~~~~~~al~~l~~~-~~v~iaTGR   48 (248)
                      .+.|.++||.||||+...+           . +.+.+.++|+.|.++ +.++++|--
T Consensus        19 ~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTNQ   75 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQ   75 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEEC
T ss_pred             CcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhCCcEEEEecCc
Confidence            4569999999999974321           1 368889999999999 999999953

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=96.85  E-value=0.00076  Score=51.24  Aligned_cols=23  Identities=17%  Similarity=0.504  Sum_probs=16.5

Q ss_pred             HHHHHHHHhhc-CeEEEEcCCChH
Q 038498           29 MLEFMRELRKV-VTVGVVGGSDLS   51 (248)
Q Consensus        29 ~~~al~~l~~~-~~v~iaTGR~~~   51 (248)
                      +.+.|+.|+++ +.++++|++...
T Consensus        96 ~~~~l~~l~~~~~~i~i~s~~~~~  119 (221)
T d1o08a_          96 ILQLLKDLRSNKIKIALASASKNG  119 (221)
T ss_dssp             HHHHHHHHHHTTCEEEECCSCTTH
T ss_pred             ceeccccccccccceEEEeecchh
Confidence            34567777777 888888887654

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=96.83  E-value=0.00059  Score=50.86  Aligned_cols=55  Identities=20%  Similarity=0.241  Sum_probs=42.7

Q ss_pred             ccceEEEEecCCCCCCCC------C----CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498            5 KQGLLALFDVDGTLTAPR------K----AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK   59 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~------~----~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~   59 (248)
                      +++|+++||+||+|++..      +    .++...-.+|..|++. +.+++.||+...........
T Consensus         3 ~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~~gi~~~iis~~~~~~v~~~~~~   68 (177)
T d1k1ea_           3 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIAD   68 (177)
T ss_dssp             GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHH
T ss_pred             ccCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHhhhcEEEEEecCCchhHHHHHHhh
Confidence            578999999999998641      1    2355667789999999 99999999998766554443

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=96.66  E-value=0.00096  Score=50.48  Aligned_cols=28  Identities=14%  Similarity=0.391  Sum_probs=19.6

Q ss_pred             HHHHHHHHHhhc-CeEEEEcCCChHHHHH
Q 038498           28 QMLEFMRELRKV-VTVGVVGGSDLSKISE   55 (248)
Q Consensus        28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~   55 (248)
                      .+.++++.++++ ++++++|+-+......
T Consensus        97 ~~~~~l~~l~~~~~~~~i~tn~~~~~~~~  125 (220)
T d1zrna_          97 EVPDSLRELKRRGLKLAILSNGSPQSIDA  125 (220)
T ss_dssp             THHHHHHHHHHTTCEEEEEESSCHHHHHH
T ss_pred             hhHHHHHHHHhcCCeEEeecchHHHHHHH
Confidence            446677777788 8888888877654433

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=96.06  E-value=0.0019  Score=49.14  Aligned_cols=47  Identities=13%  Similarity=0.127  Sum_probs=37.0

Q ss_pred             ccceEEEEecCCCCCCCCC----------------------------------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            5 KQGLLALFDVDGTLTAPRK----------------------------------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~~~----------------------------------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      ++..+|+||+|-|+|++..                                  ..-+.+++.++.++++ ++|+++|||+
T Consensus        33 ~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~  112 (209)
T d2b82a1          33 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRS  112 (209)
T ss_dssp             CCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSC
T ss_pred             CCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCc
Confidence            4456999999999998521                                  0123578899999999 9999999998


Q ss_pred             hH
Q 038498           50 LS   51 (248)
Q Consensus        50 ~~   51 (248)
                      ..
T Consensus       113 ~~  114 (209)
T d2b82a1         113 PT  114 (209)
T ss_dssp             CC
T ss_pred             hh
Confidence            54

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.28  E-value=0.012  Score=43.99  Aligned_cols=50  Identities=18%  Similarity=0.198  Sum_probs=41.7

Q ss_pred             HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhh
Q 038498          191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF  244 (248)
Q Consensus       191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v  244 (248)
                      .......++     ++++++|||    +.+|+.+.+.+|+.++.|.++...+.++.+.-
T Consensus       160 p~~~~~~~~~~~v~p~~~l~IgD----~~~Di~~A~~aG~~ti~V~~~~~~~~el~~~~  214 (222)
T d1cr6a1         160 PQIYNFLLDTLKAKPNEVVFLDD----FGSNLKPARDMGMVTILVHNTASALRELEKVT  214 (222)
T ss_dssp             HHHHHHHHHHHTSCTTSEEEEES----SSTTTHHHHHHTCEEEECCSSSHHHHHHHHHH
T ss_pred             hHHHHHHHHHhCCCcceEEEEEC----CHHHHHHHHHcCCEEEEECCcchHHHHHHHhh
Confidence            444455543     899999999    99999999999989999999998888877653

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.22  E-value=0.02  Score=40.19  Aligned_cols=53  Identities=25%  Similarity=0.441  Sum_probs=43.6

Q ss_pred             cceEEEEecCCCCCCCC-CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHH---HHHhc
Q 038498            6 QGLLALFDVDGTLTAPR-KAATPQMLEFMRELRKV-VTVGVVGGSDLSKI---SEQLG   58 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~-~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~---~~~l~   58 (248)
                      +.++++||-+||++..- ..+-+.+.++|+.|++. +++.+.||-.....   .+.++
T Consensus         2 ~~~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lg   59 (135)
T d2b8ea1           2 KVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN   59 (135)
T ss_dssp             HCCEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             eEEEEEECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhh
Confidence            56899999999998653 34778899999999999 99999999998753   34554

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=94.90  E-value=0.0049  Score=47.07  Aligned_cols=30  Identities=17%  Similarity=-0.010  Sum_probs=27.3

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|+...+.+|+.+|.|...
T Consensus       164 p~e~l~VgD----~~~di~~A~~aG~~tv~v~r~  193 (245)
T d1qq5a_         164 PAEVLFVSS----NGFDVGGAKNFGFSVARVARL  193 (245)
T ss_dssp             GGGEEEEES----CHHHHHHHHHHTCEEEEECCS
T ss_pred             hhhEEEEeC----CHHHHHHHHHcCCeEEEEcCC
Confidence            899999999    999999999999888888643

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.72  E-value=0.013  Score=43.28  Aligned_cols=51  Identities=16%  Similarity=0.231  Sum_probs=36.8

Q ss_pred             cccceEEEEecCCCCCCCCCC-----------------------CCHHHHHHHHHHhhcCeEEEEcCCChHHHH
Q 038498            4 RKQGLLALFDVDGTLTAPRKA-----------------------ATPQMLEFMRELRKVVTVGVVGGSDLSKIS   54 (248)
Q Consensus         4 ~~~~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~~~v~iaTGR~~~~~~   54 (248)
                      +.+.+.+++|||+||+++...                       .=|...+.|+.+.+...+++-|.-+..-..
T Consensus        12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~   85 (181)
T d1ta0a_          12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYAD   85 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHH
T ss_pred             cCCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhceEEEEEcCCcHHHHH
Confidence            345689999999999974210                       256678899998776777787877765433

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=94.49  E-value=0.0034  Score=52.28  Aligned_cols=44  Identities=11%  Similarity=0.076  Sum_probs=31.8

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCce--EEccCc-hh---hHHH-HhhhhccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVG--HTVTSP-ED---TMEK-CKALFLAK  247 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~--~av~Na-~~---~~k~-~A~~v~~~  247 (248)
                      +++++++||    +.||++|++.+|+.+  |+||.. .+   ++.+ .|++|..+
T Consensus       315 ~~~~~~vGD----~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~  365 (380)
T d1qyia_         315 KDDVFIVGD----SLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH  365 (380)
T ss_dssp             TTTEEEEES----SHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS
T ss_pred             CCeEEEECC----CHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECC
Confidence            678999999    999999999998644  445543 23   3322 47888765

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.42  E-value=0.007  Score=45.31  Aligned_cols=29  Identities=10%  Similarity=0.098  Sum_probs=27.1

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS  232 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N  232 (248)
                      ++++++|||    +.+|+...+.+|+.++.|.+
T Consensus       176 p~e~l~VgD----~~~Dv~~A~~aG~~ti~v~r  204 (225)
T d2g80a1         176 ASEVLFLSD----NPLELDAAAGVGIATGLASR  204 (225)
T ss_dssp             GGGEEEEES----CHHHHHHHHTTTCEEEEECC
T ss_pred             chhceeecC----CHHHHHHHHHcCCEEEEEeC
Confidence            899999999    99999999999988998864

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.03  E-value=0.028  Score=40.42  Aligned_cols=49  Identities=14%  Similarity=0.135  Sum_probs=39.5

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc--hhhHHHH
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP--EDTMEKC  240 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na--~~~~k~~  240 (248)
                      -.|...+..+++     ++++++|||    +.+|+...+.+|+.++.|.++  .+++++.
T Consensus        98 kp~~~~~~~~~~~~~~~~~~~l~igD----~~~di~aA~~aG~~~i~v~~G~~~~~~~~~  153 (164)
T d1u7pa_          98 GSKVTHFERLHHKTGVPFSQMVFFDD----ENRNIIDVGRLGVTCIHIRDGMSLQTLTQG  153 (164)
T ss_dssp             SCHHHHHHHHHHHHCCCGGGEEEEES----CHHHHHHHHTTTCEEEECSSCCCHHHHHHH
T ss_pred             CCChHHHHHHHHHhCCChHHEEEEcC----CHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence            467777777775     899999999    999999999999889999874  4455543

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.0077  Score=44.89  Aligned_cols=50  Identities=16%  Similarity=0.228  Sum_probs=40.4

Q ss_pred             HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498          190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL  243 (248)
Q Consensus       190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~  243 (248)
                      +....+++++     ++++++|||    +..|+...+.+|+.++.|.++...++++-+.
T Consensus       161 ~~~~~~~~~~~~~~~p~e~l~VgD----~~~Di~~A~~~G~~ti~v~~~~~~~~~l~~~  215 (225)
T d1zd3a1         161 EPQIYKFLLDTLKASPSEVVFLDD----IGANLKPARDLGMVTILVQDTDTALKELEKV  215 (225)
T ss_dssp             CHHHHHHHHHHHTCCGGGEEEEES----CHHHHHHHHHTTCEEEECSSHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhcccCccceeEEec----CHHHHHHHHHcCCEEEEECCcchhHHHHHHc
Confidence            3455666664     899999999    9999999999998899999887766665544

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.011  Score=42.83  Aligned_cols=43  Identities=23%  Similarity=0.332  Sum_probs=35.5

Q ss_pred             ceEEEEecCCCCCCCCC-----------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498            7 GLLALFDVDGTLTAPRK-----------AATPQMLEFMRELRKV-VTVGVVGGSD   49 (248)
Q Consensus         7 ~kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~-~~v~iaTGR~   49 (248)
                      .|+||||.||||..+..           .+-+.+.++|+.|+++ ++++++|..+
T Consensus         2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~   56 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQD   56 (161)
T ss_dssp             CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred             CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHcCCceeeecccc
Confidence            48999999999987532           2356789999999999 9999999763

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.38  E-value=0.0084  Score=44.94  Aligned_cols=14  Identities=50%  Similarity=0.871  Sum_probs=12.8

Q ss_pred             eEEEEecCCCCCCC
Q 038498            8 LLALFDVDGTLTAP   21 (248)
Q Consensus         8 kli~~DlDGTLl~~   21 (248)
                      |+++||+||||+++
T Consensus         1 r~v~FDlDGtL~~~   14 (222)
T d1cr6a1           1 RVAAFDLDGVLALP   14 (222)
T ss_dssp             CEEEECGGGTTEES
T ss_pred             CEEEEcCCCceECC
Confidence            78999999999976

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.35  E-value=0.025  Score=41.82  Aligned_cols=17  Identities=41%  Similarity=0.620  Sum_probs=14.7

Q ss_pred             cceEEEEecCCCCCCCC
Q 038498            6 QGLLALFDVDGTLTAPR   22 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~   22 (248)
                      .+|+|+||+||||+++.
T Consensus         1 tIk~vlFD~dGtL~~~~   17 (225)
T d1zd3a1           1 TLRAAVFDLDGVLALPA   17 (225)
T ss_dssp             CCCEEEECTBTTTEESC
T ss_pred             CcEEEEEcCCCCeecCH
Confidence            37999999999999763

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=93.07  E-value=0.039  Score=39.68  Aligned_cols=44  Identities=11%  Similarity=0.044  Sum_probs=35.1

Q ss_pred             CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh
Q 038498          188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED  235 (248)
Q Consensus       188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~  235 (248)
                      -.+....+.+++     ++++++|||    +.+|+...+.+|..++.|.++..
T Consensus       141 Kp~~~~~~~~~~~~~~~~~~~l~vgD----s~~di~~A~~aG~~ti~v~~~~~  189 (197)
T d2b0ca1         141 KPEARIYQHVLQAEGFSPSDTVFFDD----NADNIEGANQLGITSILVKDKTT  189 (197)
T ss_dssp             TTCHHHHHHHHHHHTCCGGGEEEEES----CHHHHHHHHTTTCEEEECCSTTH
T ss_pred             ccchHHHHHHHHhcCCCCCeEEEEeC----CHHHHHHHHHcCCEEEEECCCCC
Confidence            344555555554     889999999    99999999999988998887653

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.067  Score=39.44  Aligned_cols=11  Identities=45%  Similarity=0.791  Sum_probs=10.3

Q ss_pred             EEEecCCCCCC
Q 038498           10 ALFDVDGTLTA   20 (248)
Q Consensus        10 i~~DlDGTLl~   20 (248)
                      |++||||||++
T Consensus         6 I~iDmDGVL~D   16 (195)
T d1q92a_           6 VLVDMDGVLAD   16 (195)
T ss_dssp             EEECSBTTTBC
T ss_pred             EEEECCCcccc
Confidence            78999999997

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=92.66  E-value=0.021  Score=41.18  Aligned_cols=25  Identities=20%  Similarity=0.329  Sum_probs=16.5

Q ss_pred             EEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498            9 LALFDVDGTLTAPRKAATPQMLEFMREL   36 (248)
Q Consensus         9 li~~DlDGTLl~~~~~i~~~~~~al~~l   36 (248)
                      |++||+||||+++.   .....+.+.++
T Consensus         2 l~iFDlDgtL~d~~---~~~~~~~~~~~   26 (197)
T d2b0ca1           2 LYIFDLGNVIVDID---FNRVLGAWSDL   26 (197)
T ss_dssp             EEEECCBTTTEEEE---THHHHHHHHHH
T ss_pred             EEEEeCCCCcCcCH---HHHHHHHHHHH
Confidence            67899999999763   23344444443

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=92.48  E-value=0.017  Score=43.27  Aligned_cols=40  Identities=13%  Similarity=0.007  Sum_probs=33.4

Q ss_pred             HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498          191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE  234 (248)
Q Consensus       191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~  234 (248)
                      ....+.+++     ++++++|||    +.+|+.+.+.+|+.+++|+++.
T Consensus       148 ~~~~~~~l~~~~i~~~~~l~VgD----~~~di~~A~~aG~~~i~v~~~~  192 (221)
T d1o08a_         148 PDIFIAAAHAVGVAPSESIGLED----SQAGIQAIKDSGALPIGVGRPE  192 (221)
T ss_dssp             THHHHHHHHHTTCCGGGEEEEES----SHHHHHHHHHHTCEEEEESCHH
T ss_pred             hHHHHHHHHHcCCCCceEEEEec----CHHHHHHHHHcCCEEEEECChh
Confidence            445566654     889999999    9999999999998899998753

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=91.13  E-value=0.062  Score=39.24  Aligned_cols=44  Identities=14%  Similarity=0.076  Sum_probs=33.2

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCc-eEEccCch---hhHHHHhhhhccC
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTV-GHTVTSPE---DTMEKCKALFLAK  247 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~-~~av~Na~---~~~k~~A~~v~~~  247 (248)
                      +++++++||    +.+|+.+.+++|+. .+.|.++.   +..+..|++|..+
T Consensus       125 ~~~s~mVGD----s~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~  172 (182)
T d2gmwa1         125 MAASYMVGD----KLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS  172 (182)
T ss_dssp             GGGCEEEES----SHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC
T ss_pred             cccccccCC----CHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC
Confidence            889999999    99999999999842 35565543   4555668887654

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=89.01  E-value=0.37  Score=34.61  Aligned_cols=52  Identities=19%  Similarity=0.296  Sum_probs=41.2

Q ss_pred             eEEEEecCCCCCCCCC-CCCHHHHHHHHHHhhc-CeEEEEcCCChHH---HHHHhcc
Q 038498            8 LLALFDVDGTLTAPRK-AATPQMLEFMRELRKV-VTVGVVGGSDLSK---ISEQLGK   59 (248)
Q Consensus         8 kli~~DlDGTLl~~~~-~i~~~~~~al~~l~~~-~~v~iaTGR~~~~---~~~~l~~   59 (248)
                      ..+++|.+|||+-..- ++-+.+.++|+.|++. +++.+.||=+...   +.++++.
T Consensus         3 ~~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi   59 (168)
T d1wpga2           3 SVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI   59 (168)
T ss_dssp             CEEEECCTTTTBCCCECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTS
T ss_pred             EEEEECCccEEEEEecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCC
Confidence            4688999999996632 3456789999999999 9999999999764   4555553

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=86.86  E-value=0.24  Score=35.76  Aligned_cols=17  Identities=24%  Similarity=0.229  Sum_probs=15.2

Q ss_pred             ccceEEEEecCCCCCCC
Q 038498            5 KQGLLALFDVDGTLTAP   21 (248)
Q Consensus         5 ~~~kli~~DlDGTLl~~   21 (248)
                      +++|.|+||+||||+++
T Consensus         1 M~~k~viFD~DGTL~dt   17 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDN   17 (187)
T ss_dssp             CCCSEEEECTBTTTBCH
T ss_pred             CCCCEEEEeCCCCcccC
Confidence            47899999999999975

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=86.68  E-value=0.19  Score=34.77  Aligned_cols=43  Identities=14%  Similarity=-0.053  Sum_probs=31.3

Q ss_pred             CCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          187 GWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       187 ~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ..-|...++.+..  .+.+++|||    +..|++|.+.+|..++.|.-+
T Consensus       103 ~~~k~~~l~~~~~~~~~i~~~igD----~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         103 DVVKEEIFWKHIAPHFDVKLAIDD----RTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEEC----CHHHHHHHHHTTCCEEECSCC
T ss_pred             hHHHHHHHHHhccCCCceEEEEcC----CHHHHHHHHHCCCcEEEeCCC
Confidence            3345555555543  344678999    999999999999888877644

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.26  E-value=0.19  Score=36.86  Aligned_cols=16  Identities=25%  Similarity=0.329  Sum_probs=14.7

Q ss_pred             cceEEEEecCCCCCCC
Q 038498            6 QGLLALFDVDGTLTAP   21 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~   21 (248)
                      .++.|+||+||||+++
T Consensus         2 ~~~~~lfD~dGTl~d~   17 (225)
T d2g80a1           2 NYSTYLLDIEGTVCPI   17 (225)
T ss_dssp             CCSEEEECCBTTTBCT
T ss_pred             CCCEEEEcCCCCCccc
Confidence            5789999999999986

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=85.95  E-value=0.16  Score=38.05  Aligned_cols=30  Identities=10%  Similarity=-0.012  Sum_probs=26.5

Q ss_pred             cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498          200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP  233 (248)
Q Consensus       200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na  233 (248)
                      ++++++|||    +.+|+.+.+.+|+.++.+.++
T Consensus       146 ~~~~~~VGD----~~~Di~aA~~AGi~~i~v~~g  175 (209)
T d2o2xa1         146 LQRSLIVGD----KLADMQAGKRAGLAQGWLVDG  175 (209)
T ss_dssp             GGGCEEEES----SHHHHHHHHHTTCSEEEEETC
T ss_pred             ccceEEeCC----CHHHHHHHHHCCCcEEEEeCC
Confidence            889999999    999999999999778777554

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.41  E-value=0.46  Score=35.48  Aligned_cols=42  Identities=12%  Similarity=-0.106  Sum_probs=31.2

Q ss_pred             CCCH--HHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccC
Q 038498          187 GWDK--TYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTS  232 (248)
Q Consensus       187 ~~~K--~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~N  232 (248)
                      +..|  ....+.+++     ++++++|||    +. +|+.+.+.+|+.++.+-|
T Consensus       161 ~~~KP~p~~~~~~~~~~~~~~~~~l~iGD----~~~~Di~~A~~~G~~~~~~~~  210 (247)
T d2gfha1         161 KEEKPAPSIFYHCCDLLGVQPGDCVMVGD----TLETDIQGGLNAGLKATVWIN  210 (247)
T ss_dssp             SSCTTCHHHHHHHHHHHTCCGGGEEEEES----CTTTHHHHHHHTTCSEEEEEC
T ss_pred             ccchhhhhhHHHHHHHhhcCHHhcceecc----ChHhHHHHHHHcCCeEEEEEC
Confidence            4556  455566654     889999999    95 899999999955565533

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=81.24  E-value=0.4  Score=35.64  Aligned_cols=17  Identities=29%  Similarity=0.245  Sum_probs=14.9

Q ss_pred             cceEEEEecCCCCCCCC
Q 038498            6 QGLLALFDVDGTLTAPR   22 (248)
Q Consensus         6 ~~kli~~DlDGTLl~~~   22 (248)
                      .+|+|+||+||||++..
T Consensus         1 MIKaviFD~dGTL~d~~   17 (245)
T d1qq5a_           1 MIKAVVFDAYGTLFDVQ   17 (245)
T ss_dssp             CCCEEEECTBTTTBCTT
T ss_pred             CCeEEEEeCCCCcEeCH
Confidence            47999999999999864

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=81.20  E-value=0.32  Score=35.56  Aligned_cols=42  Identities=10%  Similarity=-0.117  Sum_probs=33.0

Q ss_pred             CCCCHHH--HHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498          186 QGWDKTY--CLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT  231 (248)
Q Consensus       186 ~~~~K~~--al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~  231 (248)
                      .+..|..  ..+..++     ++++++|||    +.+|+...+.+|+.++.|.
T Consensus       145 ~~~~KP~p~~~~~~~~~~g~~p~e~l~VgD----~~~Di~~A~~aG~~~v~v~  193 (220)
T d1zrna_         145 VQVYKPDNRVYELAEQALGLDRSAILFVAS----NAWDATGARYFGFPTCWIN  193 (220)
T ss_dssp             GTCCTTSHHHHHHHHHHHTSCGGGEEEEES----CHHHHHHHHHHTCCEEEEC
T ss_pred             eeccccHHHHHHHHHHHhCCCCceEEEEec----ChHhHHHHHHcCCEEEEEc
Confidence            4556654  4444443     899999999    9999999999998888885