Citrus Sinensis ID: 038616

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-
Protein Sequence
MSFNFNSFNSQPNFGFNSSRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQRNSQPTIGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGVAEVAVTEVVKTKFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQPFHNTFQNTTQNKSMSPSSTMSSQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMSEESSDDEDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMARSSNGSLTIVHGRSFKNIADWRRKEKRAAVKIEDGDDQVQKQGEDGLTIGGIAVKEEALA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccHHHHHHHHHcccccccccEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccHHHHHHccccccccccccccccccccccccccccEEEccccccccccHHHHccccccccccccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHcccccccHHHHHHcccccEEEccEEEcHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHcccccccccccccccccEEcccccccccccccccEEEcccccccccccHHHHcccHHHHEEccccccccccEEEEEEEEEccccccccccEEEEEEEEEEcEEEcccccccccccccccccEccccccccccccccccccccccccccccccccccccccHHcccccccEEEEEEEEEEccEccccccccccHHHccHHHHHHcccccccccccccccccccccccccccccccccHEEcccccccEEEcccccHcHccccccccccccccccccccccccccccccccEEccccccccccccccccccEcHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHcccccEEEEEcHHHHHHHHHHHHHHHHEEEEcccccHHEcccccccEEcEEEEHHHHcc
Coil and Loop (DISEMBL)
msfnfnsfnsqpnfgfnssralpnfgsnfhndngqgfdfnysnvgqnhvnygqnelipqrnsqptigagqlgLSQRVSDvirrnnfspsyprrvQVQSVIdyypvenqpgvaeVAVTEVVKTKfltssastrdrilapndhmissshqqpflrnrnfllsnqpnqlsdqnyesiydspsflqnwsqnplttqnnneqpfhntfqnttqnksmspsstmssqvnnsfpdnndvpaqnilnqnprqhqpnnlpvakhdceeildpeplsvlapqsqnpshdhdlvgdliyaprkmseessddededeegdgvihslsrkkygpyicpkciQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMarssngsltivhgrsfKNIADWRRKEKRAAvkiedgddqvqkqgedgltiggiaVKEEALA
Flexible Loop (DISEMBL)
MSFNFNSFNSQPNFGFNSSRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQRNSQPTIGAGQLGLSQRVSDVIRrnnfspsyprrvqVQSVIDYYPVENQPGVAEVAVTEVVKtkfltssastrdriLAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQPFHNTFQNTTQNKSMSPSSTMSSQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMSeessddededeegdgvihslsrkkygpYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAkykkknilrmarssngsltivhgrsfkniadWRRKEKRaavkiedgddqvqkqgedgltiggiavkeeala
Low Complexity Region (SEG)
MsfnfnsfnsqpnfgfnssRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQRNSQPTIGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGvaevavtevvktkFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQPFHNTFQNTTQNKsmspsstmssQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMseessddededeegdgVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETaaerkkrlaakykkkNILRMARSSNGSLTIVHGRSFKNIADWRRKEKRAAVKIEDGDDQVQKQGEDGLTIGGIAVKEEALA
Disordered region (IsUnstruct)
*********************************GQGFDFNYSNVGQNHVNYGQ***********************VSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGVAEVAVTEVVKTKFLT*******************************************************************************************************************************************************************************************LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMA****GSLTIVHGRSFKNIADWR**************************************
Disordered Region (DISOPRED)
*******FNSQPNFGFNSSRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQRNSQ*TIGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGVAEVAVTEVVKTKFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYE****************************NTFQNTTQNKSMSPSSTMSSQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLA*****************Y******************GDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHV***************************RMARSSNGSLTIVHGRSFKNIAD**************************LTIGGIAVKEEA**
Disordered Region (DISEMBL)
MSFNFNSFNSQPNFGFNSSRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQRNSQPTIGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGVAEVAVTEVVKTKFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQPFHNTFQN*****************NNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRK*****************VIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMARSSNGSLTIVHGRSFKNIADWRRKEKRAAVKIEDGDDQVQKQGEDGLTIGGIAVKEEALA
Disordered Region (DISPRO)
*********SQPNFGFNSSRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQRNSQPTIGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGVAEVAVTEVVKTKFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQPFHNTFQNTTQNKSMSPSSTMSSQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMSEESSDDEDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMARSSNGSLTIVHGRSFKNIADWRRKEKRAAVKIEDGDDQVQKQGEDGLTIGGIAVKEEAL*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSFNFNSFNSQPNFGFNSSRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQRNSQPTIGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGVAEVAVTEVVKTKFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQPFHNTFQNTTQNKSMSPSSTMSSQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMSEESSDDEDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMARSSNGSLTIVHGRSFKNIADWRRKEKRAAVKIEDGDDQVQKQGEDGLTIGGIAVKEEALA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	431
255574424	475	hypothetical protein RCOM_0146500 [Ricin	0.781	0.709	0.327	4e-28
224076050	435	predicted protein [Populus trichocarpa]	0.728	0.721	0.290	1e-23
356536552	325	PREDICTED: uncharacterized protein LOC10	0.232	0.307	0.454	4e-16
255647072	325	unknown [Glycine max]	0.232	0.307	0.454	4e-16
297812445	340	zinc finger family protein [Arabidopsis	0.245	0.311	0.421	4e-14
147819102	299	hypothetical protein VITISV_011729 [Viti	0.155	0.224	0.623	6e-14
15226613	329	C2H2-like zinc finger protein [Arabidops	0.266	0.349	0.372	6e-13
297832510	333	hypothetical protein ARALYDRAFT_900233 [	0.278	0.360	0.370	9e-13
297836188	330	zinc finger family protein [Arabidopsis	0.278	0.363	0.377	1e-12
91805447	301	zinc finger family protein [Arabidopsis	0.245	0.352	0.398	2e-12

>gi|255574424|ref|XP_002528125.1| hypothetical protein RCOM_0146500 [Ricinus communis] gi|223532464|gb|EEF34255.1| hypothetical protein RCOM_0146500 [Ricinus communis]

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 194/412 (47%), Gaps = 75/412 (18%)

Query: 1   MSFNFNSFNSQPN---FGFNSSRA---LPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQN 54
           M+ N NSFN  PN   FG  +      L +  SN   +N  G  F  S +      +G N
Sbjct: 1   MAGNLNSFN--PNSLDFGLINDAMDHFLLSLNSNLDQNNVNGSTFINSQL------FGSN 52

Query: 55  ELIPQRNSQPT-------IGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVEN 107
            +I    + PT       +  GQLGLSQR+S+V RR   +P    RVQV S IDY+PV+ 
Sbjct: 53  SIISVHQNNPTPQADHARVSHGQLGLSQRLSEV-RRTYVAP---HRVQVHSFIDYFPVQQ 108

Query: 108 QPGVA----EVAVTEVVKT-KFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQ 162
           Q        EV VTE+V+T KFLTS+    + +  PND  I   H Q   +N    +SN 
Sbjct: 109 QNQSICPQHEVTVTEIVRTTKFLTSTPKM-EPLFTPND--IFHPHDQHNFQNHGLPISN- 164

Query: 163 PNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQPFHNTFQNTTQNKSMSPSSTMSSQV 222
                  N+ S+  S  F   +S  P    N N+    NT+        + P +    + 
Sbjct: 165 -----ILNHHSLIKSEPF---YSPYPSLESNKNQ--MMNTYDGDMNGDLVQPLALTGQEH 214

Query: 223 NNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNP-SH--- 278
            N            ++ ++P Q  P+     +H     ++   + V +  + N  SH   
Sbjct: 215 TNHL----------MMPKSPVQQFPH-----RHTNPPAINLHEIKVESDTNGNLLSHRKR 259

Query: 279 -DHDL-VGDLIYAPRK-------MSEESSDDEDEDEEGDGVIHSLSRKKYGPYICPKCIQ 329
            DH + V  LI   R+       +   ++D    D E DG  HSL  +KYGPY CPKC  
Sbjct: 260 ADHMMTVKYLIQQLRRTHPNASNLQTNTADMGSSDTEDDGRTHSLPHEKYGPYTCPKCRN 319

Query: 330 EFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMARSSNGSLTIV 381
            F  SQ+FAAH+ + HY+ E++ +RKKRLAAKYK+KN+  + R   G +T++
Sbjct: 320 VFSVSQTFAAHMLT-HYKNESSDQRKKRLAAKYKRKNLRLVYRR--GGMTLL 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076050|ref|XP_002304889.1| predicted protein [Populus trichocarpa] gi|222842321|gb|EEE79868.1| predicted protein [Populus trichocarpa]

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 196/448 (43%), Gaps = 134/448 (29%)

Query: 42  SNVGQNHVNYGQNELIPQRNSQPTIGA--------------GQLGLSQRVSDVIRRNNFS 87
           SN+ Q+HVN G   +IPQ +  PTIG               GQ+ L QR+S+V R +  S
Sbjct: 25  SNLAQDHVN-GHGRIIPQ-SLAPTIGTVQPNNLFVPQRAGLGQIALGQRLSEVRRTHVSS 82

Query: 88  PSYPRRVQVQSVIDYYPVEN--------QPGVAEVAVTEVVKTKF--LTSSASTRDRILA 137
            S    V++ ++I+Y P E          P  ++  VTE+ +T +      AS R+ +  
Sbjct: 83  LS----VRIHTIIEYLPTEQNQIEALPLHP-TSDYTVTEIPRTTYTQFLPPASPRELLFT 137

Query: 138 PNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNEQ 197
           PN + I   H Q    N  F +  QPN    QN+           N + +    Q+N  +
Sbjct: 138 PNHNNI---HLQSLNPNDGFRIQGQPN---FQNH-----------NLTMSNQVNQHNAYR 180

Query: 198 PFHNTFQNTTQNKSMSPSSTMSSQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDC 257
           P+      +  N+ M     +   +N+S  +N+ V                         
Sbjct: 181 PY------SPPNRQMINFMNLD-HLNHSHGNNDGV------------------------- 208

Query: 258 EEILDPEPLSVLAP----QSQNP----SHDHDL------VGDLIYAPRKMSEESSDDEDE 303
             +L+PEPLSV AP    ++QNP      +H+L      +  +   PR  + +  +++  
Sbjct: 209 --VLNPEPLSVYAPPGISRAQNPNLNLGQNHNLETSQLDIDQVRINPRDEARDIPNNQSS 266

Query: 304 DEE--------GDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERK 355
                       DGV HSL  +KYGPYICP+C +   TSQ+FAAH+ + HYR E   +RK
Sbjct: 267 TSSEDEEEMGLNDGVTHSLPHQKYGPYICPRCKKICETSQTFAAHMLT-HYRVENKEQRK 325

Query: 356 KRLAAKYKKKNILRMARSSNGSLTI----------VHGRSFKNIAD------------WR 393
           +RLAAK KKKN+ ++    NG LTI          VH R                   + 
Sbjct: 326 RRLAAKNKKKNLHQIHSRGNG-LTISPAGTENLQEVHSRGIGLTISPVGTKGKVPSKVYV 384

Query: 394 RKEKRAAVKIEDG------DDQVQKQGE 415
           R++K A  K E        +D+VQK+G+
Sbjct: 385 RRKKAAGGKAEMATSKRVVEDKVQKEGQ 412

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536552|ref|XP_003536801.1| PREDICTED: uncharacterized protein LOC100788426 [Glycine max]

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 67/121 (55%), Gaps = 21/121 (17%)

Query: 261 LDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMSEESSDDEDEDEEGDGVIHSLSRKKYG 320
           L P PLSV  P   +   +H   GD  Y                   DG +HS   KK G
Sbjct: 160 LCPSPLSVCFPHETSTLQNHVRGGDTKY-------------------DGRMHSYPYKKNG 200

Query: 321 PYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMARSSNGSLTI 380
           PY CPKC   F TSQ FAAHV+S+HY++ET +ERKKRL AK +K+N LR+   S G LT+
Sbjct: 201 PYTCPKCGHVFETSQRFAAHVSSSHYKYETKSERKKRLMAKIRKRN-LRIEWVSGG-LTV 258

Query: 381 V 381
           V
Sbjct: 259 V 259

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647072|gb|ACU24004.1| unknown [Glycine max]

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 67/121 (55%), Gaps = 21/121 (17%)

Query: 261 LDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMSEESSDDEDEDEEGDGVIHSLSRKKYG 320
           L P PLSV  P   +   +H   GD  Y                   DG +HS   KK G
Sbjct: 160 LCPSPLSVCFPHETSTLQNHVRGGDTKY-------------------DGRMHSYPYKKNG 200

Query: 321 PYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMARSSNGSLTI 380
           PY CPKC   F TSQ FAAHV+S+HY++ET +ERKKRL AK +K+N LR+   S G LT+
Sbjct: 201 PYTCPKCGHVFETSQRFAAHVSSSHYKYETKSERKKRLMAKIRKRN-LRIEWVSGG-LTV 258

Query: 381 V 381
           V
Sbjct: 259 V 259

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812445|ref|XP_002874106.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297319943|gb|EFH50365.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 67/128 (52%), Gaps = 22/128 (17%)

Query: 259 EILDPEPLSVLAPQ------------SQNPSHD-------HDLVGDLIYAPRKMSEESSD 299
           EIL+P PL+ + P             S +P H        H  V     A +   EE+ D
Sbjct: 159 EILNPTPLNTIFPHQTSVFRRNLDMFSFSPKHHPHQYVSYHQPVKKHCGATKHF-EETFD 217

Query: 300 DEDEDEEG--DGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKR 357
           D D  E G  DG  HSL  KKYGPY CPKC + F TSQ FAAH++S HY+ ET  E+ KR
Sbjct: 218 DFDSKENGEYDGRTHSLPYKKYGPYTCPKCNRVFDTSQKFAAHISSMHYKNETIEEKFKR 277

Query: 358 LAAKYKKK 365
             A+ KK+
Sbjct: 278 YNARNKKR 285

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147819102|emb|CAN71222.1| hypothetical protein VITISV_011729 [Vitis vinifera]

 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 50/69 (72%), Gaps = 2/69 (2%)

Query: 313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNILRMAR 372
           SL   KYGPY CP+C  E  TSQSFA+H+ S HY  ET  ERKKR+ AKYKKKN LR+A 
Sbjct: 230 SLKHXKYGPYTCPRCKMEIETSQSFASHMKS-HYSSETEDERKKRIEAKYKKKN-LRVAY 287

Query: 373 SSNGSLTIV 381
           S +G LT+V
Sbjct: 288 SYDGQLTLV 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226613|ref|NP_179176.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|4335740|gb|AAD17418.1| putative C2H2-type zinc finger protein [Arabidopsis thaliana] gi|225898108|dbj|BAH30386.1| hypothetical protein [Arabidopsis thaliana] gi|330251340|gb|AEC06434.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 30/145 (20%)

Query: 259 EILDPEPLSVLAPQSQNPS---------------HDHDLVGD-----LIYAPRKMSEESS 298
           E L+P+PL+V+ P SQN +               HD  ++ D      I  P    E ++
Sbjct: 155 EFLNPKPLNVIFP-SQNSAYPQHLDMFSLSSKHNHDQRVLQDGRSMKKILKPTIFFEATT 213

Query: 299 D-------DEDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETA 351
           D       ++  ++  DG  HSL  +KYGPY CPKC   F TSQ FAAH+ S+HY+ ET+
Sbjct: 214 DYIESQENEKSNNDHNDGRTHSLPYEKYGPYTCPKCNGVFNTSQKFAAHM-SSHYKNETS 272

Query: 352 AERKKRLAAKYKKKNILRMARSSNG 376
            ER++R+ AK K+K   ++ R  NG
Sbjct: 273 EEREQRIRAKNKRK-FCKLNREING 296

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832510|ref|XP_002884137.1| hypothetical protein ARALYDRAFT_900233 [Arabidopsis lyrata subsp. lyrata] gi|297329977|gb|EFH60396.1| hypothetical protein ARALYDRAFT_900233 [Arabidopsis lyrata subsp. lyrata]

 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 31/151 (20%)

Query: 241 NPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQ--------------SQNPSHDHDLVGD- 285
           NP  H PN L      C+ IL PEPL+V+ P+              S   +HD ++  + 
Sbjct: 145 NPTLHSPNFL---DKQCQ-ILTPEPLNVIFPRQNSVDRQHLNFFSLSSKHNHDQNICHEG 200

Query: 286 ----LIYAPRKMSEESSD-------DEDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTS 334
                +  P   S++++D       ++ +D++ DG  HSL  +KYGPY CPKC   F TS
Sbjct: 201 RSLEKVSKPTTFSKKTNDYIHCEKNEKIDDDQYDGRTHSLPYEKYGPYTCPKCNGVFNTS 260

Query: 335 QSFAAHVASAHYRFETAAERKKRLAAKYKKK 365
           Q FAAH+ S+HY+ ET  ER +RL A+ K+K
Sbjct: 261 QQFAAHM-SSHYKGETNKERDQRLRARNKRK 290

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836188|ref|XP_002885976.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297331816|gb|EFH62235.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 79/151 (52%), Gaps = 31/151 (20%)

Query: 241 NPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDL-------------- 286
           NP+   PN   +    CE +L+P+PL+V+ P+  +    H  +  L              
Sbjct: 142 NPKFFPPN---IFDKQCE-LLNPKPLNVIVPRQDSAYSQHLDMFSLSSKHNYNQRVPQYG 197

Query: 287 -----IYAPRKMSEESSD----DEDE---DEEGDGVIHSLSRKKYGPYICPKCIQEFLTS 334
                I  P K    S+D    +E+E   D++ DG  HSL  +KYGPY CPKC   F TS
Sbjct: 198 SFLKKILKPTKFFGTSTDYIESEENEKSNDDQYDGRTHSLPYEKYGPYTCPKCNGVFDTS 257

Query: 335 QSFAAHVASAHYRFETAAERKKRLAAKYKKK 365
           Q FAAH+ S+HY+ ET+ ER+ RL AK K+K
Sbjct: 258 QKFAAHM-SSHYKNETSEEREHRLRAKNKRK 287

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|91805447|gb|ABE65452.1| zinc finger family protein [Arabidopsis thaliana]

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 70/133 (52%), Gaps = 27/133 (20%)

Query: 259 EILDPEPLSVLAPQ------------SQNPSHDHD-----------LVGDLIYAPRKMSE 295
           EIL+PEPL+V+ P             S +  H+HD            +     +  K +E
Sbjct: 130 EILNPEPLNVIFPHQNSGDRQYLNMFSLSSKHNHDQNVFHEGRSSTKIPKPTMSIEKTTE 189

Query: 296 ESSDDEDE---DEEGDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAA 352
               +E+E   D + DG IHSL  KKYGPY CPKC   F TSQ FAAH+ S+HY+ ET  
Sbjct: 190 YIDCEENEKSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHM-SSHYKSETNK 248

Query: 353 ERKKRLAAKYKKK 365
           ER +R  A+ K+K
Sbjct: 249 ERAQRFRARNKRK 261

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	431
TAIR|locus:2046318	251	AT2G18490 "AT2G18490" [Arabido	0.090	0.155	0.675	6.9e-10
TAIR|locus:2053598	329	AT2G15740 "AT2G15740" [Arabido	0.088	0.115	0.641	4.9e-09
TAIR|locus:2163857	300	AT5G42640 "AT5G42640" [Arabido	0.088	0.126	0.615	8.1e-08
TAIR|locus:2172716	324	AT5G22990 "AT5G22990" [Arabido	0.090	0.120	0.615	4.3e-07
DICTYBASE|DDB_G0287057	953	gtaN "GATA zinc finger domain-	0.313	0.141	0.264	0.00072

TAIR|locus:2046318 AT2G18490 "AT2G18490" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
 Identities = 27/40 (67%), Positives = 30/40 (75%)

Query:   311 IHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             IHSL  KKYGPY CPKC   F TSQ FAAH++S HY+ ET
Sbjct:   158 IHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSS-HYKSET 196

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2053598 AT2G15740 "AT2G15740" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)

Query:   312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             HSL  +KYGPY CPKC   F TSQ FAAH++S HY+ ET
Sbjct:   234 HSLPYEKYGPYTCPKCNGVFNTSQKFAAHMSS-HYKNET 271

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2163857 AT5G42640 "AT5G42640" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
 Identities = 24/39 (61%), Positives = 26/39 (66%)

Query:   312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             HSL   KYGPY CP+C   F TSQ FAAH+ S HY  ET
Sbjct:   233 HSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLS-HYNNET 270

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2172716 AT5G22990 "AT5G22990" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
 Identities = 24/39 (61%), Positives = 29/39 (74%)

Query:   312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             HSL  +KYGPY CPKC   F TSQ FAAH++S HY+ E+
Sbjct:   236 HSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMHYKNES 274

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

DICTYBASE|DDB_G0287057 gtaN "GATA zinc finger domain-containing protein 14" [Dictyostelium discoideum (taxid:44689)]

 Score = 112 (44.5 bits), Expect = 0.00072, Sum P(2) = 0.00071
 Identities = 37/140 (26%), Positives = 61/140 (43%)

Query:   139 NDHMISSSHQQPFLRNRNFLLSNQPNQLSDQ-NYESIYDSPSFLQNWSQNPLTTQNNNEQ 197
             N++  ++++ Q +  N N   +NQ NQ+ +Q N ++ Y+  +   N +QN     NNN+ 
Sbjct:   548 NNNNNNNNNNQNYNNNHNNQFNNQNNQIHNQSNNQNNYNQNNNHNNNNQN---NNNNNQN 604

Query:   198 PFHNTFQNTTQNKXXXXXXXXXXQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDC 257
               +N  QN   N             NN+          N  + +PR   PNN P+  +  
Sbjct:   605 NNNNNNQNNNNNNNNINNNNNNNNNNNNGNTGLSSSTNNSKHSSPRS-SPNNSPLNYNTN 663

Query:   258 EEILDPEPLSVLAPQSQNPS 277
             EE  +    S  +P S N S
Sbjct:   664 EEYYNSGSSSPSSPGSPNSS 683

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	431
PHA00616	44	hypothetical protein	97.08
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.01
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.83
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.59
PHA02768	55	hypothetical protein; Provisional	95.93
smart00355	26	ZnF_C2H2 zinc finger.	94.6
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.18
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	93.29
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	93.26
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	92.79
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.65
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.05
COG4049	65	Uncharacterized protein containing archaeal-type C	91.58
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	91.4
PHA00732	79	hypothetical protein	87.92
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	86.53
PHA00733	128	hypothetical protein	85.87

>PHA00616 hypothetical protein

Probab=97.08  E-value=0.00028  Score=52.62  Aligned_cols=27  Identities=26%  Similarity=0.482  Sum_probs=24.4

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhccc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      ||.||.|+++|...+.+..|+.+.|-.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~   27 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQ   27 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCC
Confidence            899999999999999999999985543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.01  E-value=0.00026  Score=43.25  Aligned_cols=23  Identities=30%  Similarity=0.765  Sum_probs=21.8

Q ss_pred             ccCcccchhhhhhHHHHHHHhhhc
Q 038616          322 YICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |+|+.|+++|.+...|..||.. |
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~-H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR-H   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH-H
T ss_pred             CCCCCCCCccCCHHHHHHHHhH-C
Confidence            7999999999999999999986 6

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.83  E-value=0.00044  Score=43.69  Aligned_cols=26  Identities=27%  Similarity=0.623  Sum_probs=23.5

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhccc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      ||+|..|++.|.+.+.|.+|+.. |.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~-h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRS-HCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCT-TTT
T ss_pred             CCCCCccCCccCChhHHHHHhHH-hcC
Confidence            79999999999999999999985 653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.59  E-value=0.0011  Score=39.19  Aligned_cols=24  Identities=25%  Similarity=0.703  Sum_probs=20.1

Q ss_pred             ccCcccchhhhhhHHHHHHHhhhc
Q 038616          322 YICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |.|+.|++.|.+...+..||...|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999744

...

>PHA02768 hypothetical protein; Provisional

Probab=95.93  E-value=0.004  Score=48.31  Aligned_cols=27  Identities=26%  Similarity=0.578  Sum_probs=24.3

Q ss_pred             ccCcccchhhhhhHHHHHHHhhhccccc
Q 038616          322 YICPKCIQEFLTSQSFAAHVASAHYRFE  349 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS~HYK~E  349 (431)
                      |.|++|++.|..++.+..||.. |-|.+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~-H~k~~   32 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRK-HNTNL   32 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHh-cCCcc
Confidence            7999999999999999999996 87543

>smart00355 ZnF_C2H2 zinc finger

Probab=94.60  E-value=0.027  Score=33.15  Aligned_cols=24  Identities=29%  Similarity=0.769  Sum_probs=21.9

Q ss_pred             ccCcccchhhhhhHHHHHHHhhhcc
Q 038616          322 YICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |.|+.|.+.|.+...|..||. .|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH-Hhc
Confidence            789999999999999999998 475

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.18  E-value=0.028  Score=36.87  Aligned_cols=24  Identities=29%  Similarity=0.581  Sum_probs=22.2

Q ss_pred             CcccCcccchhhhhhHHHHHHHhh
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      |+|.|.-|++.|..+..+.+|+.+
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            689999999999999999999886

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=93.29  E-value=0.023  Score=36.95  Aligned_cols=21  Identities=29%  Similarity=0.605  Sum_probs=17.1

Q ss_pred             eccccccCcccCcccchhhhh
Q 038616          313 SLSRKKYGPYICPKCIQEFLT  333 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdT  333 (431)
                      -.-|.+..||.|+.|++.|.+
T Consensus         6 ~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    6 MRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHSSSSSEEESSSSEEESS
T ss_pred             hhhcCCCCCCCCCCCcCeeCc
Confidence            334678899999999999864

...

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=93.26  E-value=0.028  Score=61.60  Aligned_cols=31  Identities=39%  Similarity=0.734  Sum_probs=28.3

Q ss_pred             CeeeeccccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          309 GVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       309 GrtHSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      =||||    +..||.||-|.|.|..|-.|.+||+|
T Consensus       301 lRIHS----GEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  301 LRIHS----GEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             heeec----CCCCcCCcccccccccCCcccccccc
Confidence            36666    78899999999999999999999999

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=92.79  E-value=0.064  Score=40.20  Aligned_cols=30  Identities=23%  Similarity=0.617  Sum_probs=23.8

Q ss_pred             cccCcccchhhhhhHHHHHHHhhh-cccccc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASA-HYRFET  350 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~-HYK~ET  350 (431)
                      +++|+.|++.|.+...+..||.+. |.+...
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~H~~~~~   80 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKHHKKRNS   80 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTTTTC-S-
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCccCCCccc
Confidence            799999999999999999999963 555543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.65  E-value=0.052  Score=33.66  Aligned_cols=22  Identities=27%  Similarity=0.661  Sum_probs=21.0

Q ss_pred             ccCcccchhhhhhHHHHHHHhh
Q 038616          322 YICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      |.|.-|++.|.+...|.+|+.|
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            7899999999999999999986

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.05  E-value=0.044  Score=35.29  Aligned_cols=22  Identities=23%  Similarity=0.600  Sum_probs=20.9

Q ss_pred             ccCcccchhhhhhHHHHHHHhh
Q 038616          322 YICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      |.|.-|++.|.+...|..||.|
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999986

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.58  E-value=0.11  Score=41.85  Aligned_cols=43  Identities=30%  Similarity=0.407  Sum_probs=34.5

Q ss_pred             ccCcccchhhhhhHHHHHHHhhhccccccHHHHHHHHHHHhhhhhH
Q 038616          322 YICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAAKYKKKNI  367 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS~HYK~ET~eERKKRl~Ar~kKr~~  367 (431)
                      +.||+|+++|..+-....|+--+|--   ...|-||.-.|.||++.
T Consensus        18 lrCPRC~~~FR~~K~Y~RHVNKaH~~---~~~r~k~~~k~~Kk~~d   60 (65)
T COG4049          18 LRCPRCGMVFRRRKDYIRHVNKAHGW---LFGRGKPKGKRLKKKYD   60 (65)
T ss_pred             eeCCchhHHHHHhHHHHHHhhHHhhh---hhcCCchhHHHHHHhhh
Confidence            68999999999999999999876742   23456777777788874

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.40  E-value=0.13  Score=40.57  Aligned_cols=31  Identities=23%  Similarity=0.517  Sum_probs=23.0

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      +-+-|-|||.|..++..|..+-.||.+.|.+
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            4467999999999999999999999988865

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PHA00732 hypothetical protein

Probab=87.92  E-value=0.31  Score=39.36  Aligned_cols=26  Identities=23%  Similarity=0.397  Sum_probs=22.9

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhcc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ||.|+.|++.|.+...+..||...|-
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~   26 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT   26 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC
Confidence            79999999999999999999984353

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=86.53  E-value=0.47  Score=46.84  Aligned_cols=33  Identities=24%  Similarity=0.591  Sum_probs=28.9

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhccccc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFE  349 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK~E  349 (431)
                      |.+..||-||-|+|.|.-...+-|||- +|.-.+
T Consensus       210 HTGEKPF~C~hC~kAFADRSNLRAHmQ-THS~~K  242 (279)
T KOG2462|consen  210 HTGEKPFSCPHCGKAFADRSNLRAHMQ-THSDVK  242 (279)
T ss_pred             ccCCCCccCCcccchhcchHHHHHHHH-hhcCCc
Confidence            467899999999999999999999999 576543

>PHA00733 hypothetical protein

Probab=85.87  E-value=0.55  Score=40.36  Aligned_cols=30  Identities=37%  Similarity=0.811  Sum_probs=26.1

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      ++.....||+|+.|++.|.+...+..|+..
T Consensus        66 ~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~   95 (128)
T PHA00733         66 LTSKAVSPYVCPLCLMPFSSSVSLKQHIRY   95 (128)
T ss_pred             cccCCCCCccCCCCCCcCCCHHHHHHHHhc
Confidence            566667899999999999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	431
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.9 bits (131), Expect = 4e-08
 Identities = 40/354 (11%), Positives = 88/354 (24%), Gaps = 117/354 (33%)

Query: 141 HMISSSHQQPFLRNRNFLLSNQP----------------NQLSDQNYESIYDSPSFLQN- 183
           HM   + +  + + ++ L   +                 + LS +  + I  S   +   
Sbjct: 6   HMDFETGEHQY-QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 184 ----WSQNPLTTQNNN---------EQPFHNTFQNTTQNKSMSPSSTM---SSQVNNSFP 227
               W+   L ++             +  +    +  + +   PS        Q +  + 
Sbjct: 65  LRLFWT---LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121

Query: 228 DNNDVPAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPL-----------SVLAPQSQNP 276
           DN      N+     R      L          L P              + +A      
Sbjct: 122 DNQVFAKYNV----SRLQPYLKL----RQALLELRPAKNVLIDGVLGSGKTWVA------ 167

Query: 277 SHDHDLVGDLIYAPRKMSEESSDDEDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTS-- 334
                              +         + D  I  L+         P+ + E L    
Sbjct: 168 ------------------LDVCLSYKVQCKMDFKIFWLN---LKNCNSPETVLEMLQKLL 206

Query: 335 -------QSFAAHVASAHYRFETAAERKKRLAAKYKKKN---ILRMARSSN-------GS 377
                   S + H ++   R  +     +RL      +N   +L   +++          
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266

Query: 378 LTIVHGRSFKNIADWRRKEKRAAVKIEDGDDQVQKQGEDGLTIGGIAVKEEALA 431
             ++  R FK + D+        + ++             LT       +E  +
Sbjct: 267 KILLTTR-FKQVTDFLSAATTTHISLDH--------HSMTLT------PDEVKS 305

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 59/422 (13%), Positives = 120/422 (28%), Gaps = 104/422 (24%)

Query: 37  FDFN--YSNVGQNHVNYGQNELIPQRNSQPTIGAGQLGLSQRVSDVIRRNNFSPSYPRRV 94
            DF   + N+     N  +  L   +     I       S   S++  R +   +  RR+
Sbjct: 180 MDFKIFWLNLKN--CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 95  QVQS-------VIDYYPVENQPGVAEVAVTEVVKTKF-------LTSSASTRDRILAPND 140
                      V+             V   +     F       LT    TR + +   D
Sbjct: 238 LKSKPYENCLLVLL-----------NVQNAKAWNA-FNLSCKILLT----TRFKQVT--D 279

Query: 141 HMISSSHQQPFL--RNRNFLLSNQPNQLSDQNYESIYDSPSFLQNWSQNPLTTQNNNE-- 196
            + +++     L   +         + L         D P   +  + NP       E  
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR--EVLTTNPRRLSIIAESI 337

Query: 197 QPFHNTFQNTTQNKSMSPSSTMSSQVNNS--------------FPDNNDVPAQ--NILNQ 240
           +    T+ N         ++ + S +N                FP +  +P    +++  
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 241 NPRQHQPNNLPVAKHDCEEILDP-EPLSVLAPQSQNPS-HDHDLVGDLIYAPRKMSEESS 298
           +          V K D   +++     S++  Q +  +     +                
Sbjct: 398 D----------VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---------------Y 432

Query: 299 DDEDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTSQS---FAAHVASAHYRFETAAERK 355
            +     E +  +H      Y          + +       F +H+   H +     ER 
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKT-FDSDDLIPPYLDQYFYSHIGH-HLKNIEHPERM 490

Query: 356 KRLAAKY------KKKNILR---MARSSNGSL--TIVHGRSFKN-IADWRRKEKRAAVKI 403
                 +      ++K  +R    A +++GS+  T+   + +K  I D   K +R    I
Sbjct: 491 TLFRMVFLDFRFLEQK--IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548

Query: 404 ED 405
            D
Sbjct: 549 LD 550

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	431
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.46
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.45
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.39
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.27
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.23
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.22
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.22
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.22
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	97.17
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.17
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.17
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.16
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.13
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.12
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.12
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.11
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.1
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.1
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.09
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.09
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.08
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.07
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.07
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.07
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.06
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.05
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.04
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.03
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.03
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.01
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.01
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.01
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.0
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.0
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.0
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.99
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	96.99
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.99
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.99
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.99
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.99
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	96.98
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.98
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.98
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.98
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	96.98
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.97
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	96.97
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	96.96
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.96
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.95
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.95
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.94
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.94
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.93
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.93
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.93
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.93
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.92
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	96.92
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.92
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	96.91
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.91
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.91
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	96.91
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	96.91
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.9
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.9
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.9
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.9
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.9
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.89
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	96.89
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.89
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.89
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.88
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.88
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.88
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	96.88
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.88
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.87
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	96.87
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	96.86
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.86
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.85
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	96.84
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.84
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.83
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.82
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.82
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.81
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.81
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.81
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.8
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	96.79
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.78
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.79
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.74
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.73
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.71
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.71
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.7
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.7
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	96.69
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	96.69
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	96.68
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.68
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.71
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.66
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	96.65
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.64
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	96.61
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	96.55
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	96.52
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	96.51
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	96.46
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	96.45
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	96.45
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	96.44
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	96.35
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	96.35
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.33
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	96.3
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	96.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	96.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	96.26
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	96.23
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	96.21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	96.15
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	96.14
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	96.09
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	96.09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	96.08
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	96.04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	96.04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	96.04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	96.04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	95.96
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	95.9
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	95.9
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	95.89
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	95.85
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	95.82
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	95.82
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	95.8
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	95.78
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	95.75
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	95.62
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	95.6
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	95.6
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	95.59
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	95.58
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	95.55
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	95.53
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	95.51
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	95.47
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	95.36
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	95.35
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	95.3
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	95.23
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	95.22
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	95.1
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	95.05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	95.01
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	94.93
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	94.92
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	94.87
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	94.84
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	94.82
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	94.77
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	94.7
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	94.68
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	94.68
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.67
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	94.62
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	94.37
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	94.32
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	94.27
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	94.16
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	94.14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	94.03
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.96
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	93.94
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	93.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	93.87
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	93.77
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	93.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	93.71
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	93.68
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	93.62
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	93.57
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	93.56
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	93.52
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	93.39
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	93.32
2epa_A	72	Krueppel-like factor 10; transforming growth facto	93.25
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	93.03
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	92.73
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	92.56
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	92.34
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	92.31
2epa_A	72	Krueppel-like factor 10; transforming growth facto	92.13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	91.42
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	91.34
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	91.32
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	90.61
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	90.31
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	90.12
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	90.01
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	89.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	89.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	88.37
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	87.16
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	83.98
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	81.37
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	80.03

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.46  E-value=6.5e-05  Score=45.82  Aligned_cols=33  Identities=27%  Similarity=0.571  Sum_probs=28.0

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~   35 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HM   35 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GT
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHHHH-hc
Confidence            3345677899999999999999999999985 74

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=4.2e-05  Score=43.53  Aligned_cols=26  Identities=35%  Similarity=0.704  Sum_probs=23.8

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      +||.|+.|++.|.++..|..|+.. |-
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~-H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRI-HS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHH-HH
T ss_pred             CCccCCCCCCccCChhHHHHHHHH-hc
Confidence            699999999999999999999985 63

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.39  E-value=4.9e-05  Score=46.57  Aligned_cols=33  Identities=24%  Similarity=0.402  Sum_probs=27.6

Q ss_pred             CeeeeccccccCcccCcccchhhhhh-HHHHHHHhhhcc
Q 038616          309 GVIHSLSRKKYGPYICPKCIQEFLTS-QSFAAHVASAHY  346 (431)
Q Consensus       309 GrtHSLP~~KyGPYtCPKCN~VFdTS-QkFAAHmsS~HY  346 (431)
                      |++|+    ...||.|+.|++.|... ..|..||.. |-
T Consensus         1 ~~~h~----~~k~~~C~~C~k~f~~~~~~L~~H~~~-H~   34 (37)
T 2elp_A            1 GSSGS----SGRAMKCPYCDFYFMKNGSDLQRHIWA-HE   34 (37)
T ss_dssp             CCSCC----CCCCEECSSSSCEECSSCHHHHHHHHH-HH
T ss_pred             CCCCC----CCCCeECCCCChhhccCHHHHHHHHHh-cC
Confidence            45554    56799999999999999 999999985 74

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.27  E-value=0.00011  Score=46.24  Aligned_cols=34  Identities=29%  Similarity=0.408  Sum_probs=29.1

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   35 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HT   35 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT-TS
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHh-cC
Confidence            44456678899999999999999999999985 74

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.23  E-value=0.00012  Score=46.13  Aligned_cols=34  Identities=26%  Similarity=0.478  Sum_probs=29.3

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-HT   36 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHH-TT
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHH-hC
Confidence            44556778899999999999999999999985 74

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.22  E-value=0.00017  Score=45.02  Aligned_cols=31  Identities=23%  Similarity=0.517  Sum_probs=27.3

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   34 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKM-HT   34 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHH-TS
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHH-hC
Confidence            35667899999999999999999999985 74

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.22  E-value=0.00016  Score=43.60  Aligned_cols=30  Identities=27%  Similarity=0.611  Sum_probs=26.3

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |.+..||.|+.|++.|.+...|..||.. |-
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~   31 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV-HT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GT
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH-cC
Confidence            3466899999999999999999999985 74

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.22  E-value=0.00013  Score=41.28  Aligned_cols=25  Identities=24%  Similarity=0.594  Sum_probs=22.2

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhcc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ||.|+.|++.|.++..|..||.. |-
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~-h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRV-HK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGG-TC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHH-cC
Confidence            79999999999999999999985 74

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=97.17  E-value=0.00016  Score=45.10  Aligned_cols=33  Identities=33%  Similarity=0.468  Sum_probs=28.3

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~   35 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CS   35 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHH-TT
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhh-cC
Confidence            3446677899999999999999999999985 74

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.17  E-value=0.00016  Score=43.64  Aligned_cols=30  Identities=23%  Similarity=0.505  Sum_probs=26.3

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~   33 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRK-HT   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHH-HT
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHH-cc
Confidence            4566799999999999999999999985 74

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.17  E-value=0.00014  Score=45.66  Aligned_cols=32  Identities=31%  Similarity=0.469  Sum_probs=27.6

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   35 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLI-HT   35 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHH-HH
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHH-cC
Confidence            345677899999999999999999999984 74

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.16  E-value=0.00015  Score=41.52  Aligned_cols=25  Identities=24%  Similarity=0.555  Sum_probs=23.1

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|+.|++.|.++..|..||.. |
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~-H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT-H   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH-C
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH-c
Confidence            589999999999999999999984 6

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.21  E-value=6.6e-05  Score=42.77  Aligned_cols=25  Identities=36%  Similarity=0.930  Sum_probs=22.9

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|+.|++.|.++..|..||.. |
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~-H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH-H   25 (26)
Confidence            489999999999999999999985 6

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=0.00022  Score=45.64  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=29.4

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-HT   36 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHH-TT
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHH-cC
Confidence            44556778899999999999999999999985 74

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=0.00022  Score=45.68  Aligned_cols=34  Identities=24%  Similarity=0.448  Sum_probs=29.1

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HT   36 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTT-TS
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHH-hC
Confidence            44456678899999999999999999999985 74

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.12  E-value=0.00021  Score=43.48  Aligned_cols=30  Identities=20%  Similarity=0.391  Sum_probs=26.4

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~   33 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNR-HS   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHH-SS
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHH-hc
Confidence            4567899999999999999999999985 74

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.12  E-value=0.00021  Score=40.75  Aligned_cols=26  Identities=23%  Similarity=0.618  Sum_probs=23.6

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||.. |-
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~-h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRS-HT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHH-HS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHH-hc
Confidence            389999999999999999999985 74

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.11  E-value=0.00017  Score=41.02  Aligned_cols=26  Identities=31%  Similarity=0.580  Sum_probs=23.8

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||.. |-
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~-h~   27 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLET-HD   27 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHT-TC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHH-hc
Confidence            589999999999999999999985 74

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.10  E-value=0.00016  Score=41.45  Aligned_cols=26  Identities=27%  Similarity=0.690  Sum_probs=23.6

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||.. |-
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILL-HE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTG-GG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHH-hc
Confidence            389999999999999999999985 74

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.10  E-value=0.00023  Score=45.53  Aligned_cols=34  Identities=21%  Similarity=0.398  Sum_probs=29.3

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HR   36 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGG-GC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhH-hC
Confidence            44456778899999999999999999999985 74

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.09  E-value=0.00024  Score=44.49  Aligned_cols=31  Identities=23%  Similarity=0.514  Sum_probs=27.2

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   34 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRT-HA   34 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGG-GC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHh-cC
Confidence            35567899999999999999999999985 74

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.09  E-value=0.00023  Score=42.52  Aligned_cols=29  Identities=21%  Similarity=0.585  Sum_probs=25.6

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+.|++.|..+..|..||.. |-
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~   31 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIRE-VH   31 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHH-TS
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHH-Hc
Confidence            456799999999999999999999985 64

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.09  E-value=0.00021  Score=45.34  Aligned_cols=33  Identities=21%  Similarity=0.389  Sum_probs=28.5

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   34 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQT-HA   34 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHH-HT
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHH-hC
Confidence            3446677899999999999999999999985 74

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=0.00019  Score=45.93  Aligned_cols=34  Identities=24%  Similarity=0.392  Sum_probs=29.4

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-HT   36 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHT-TS
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHH-hC
Confidence            44556778899999999999999999999985 74

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.08  E-value=0.00022  Score=43.37  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=26.2

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      +....||.|+.|++.|.+...|..||.. |-
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~   33 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI-HT   33 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHH-HC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHH-hC
Confidence            3456799999999999999999999985 74

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.08  E-value=0.0002  Score=41.23  Aligned_cols=27  Identities=22%  Similarity=0.472  Sum_probs=23.2

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||..+|-
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            389999999999999999999544574

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.00029  Score=45.28  Aligned_cols=34  Identities=21%  Similarity=0.416  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HT   36 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG-GT
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHh-cC
Confidence            33446678899999999999999999999985 74

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.00025  Score=45.36  Aligned_cols=32  Identities=25%  Similarity=0.437  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERT-HA   36 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGG-GS
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhH-hc
Confidence            345677899999999999999999999985 74

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.08  E-value=0.0002  Score=45.49  Aligned_cols=33  Identities=24%  Similarity=0.442  Sum_probs=28.4

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -.-|....||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERT-HA   36 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHH-CC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHh-cC
Confidence            3346677899999999999999999999985 74

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=0.00022  Score=45.48  Aligned_cols=34  Identities=32%  Similarity=0.509  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HS   36 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHH-HC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHH-cC
Confidence            34456678899999999999999999999985 74

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.07  E-value=0.00019  Score=43.71  Aligned_cols=29  Identities=21%  Similarity=0.519  Sum_probs=25.8

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~   33 (37)
T 2elo_A            5 SSGRSYSCPVCEKSFSEDRLIKSHIKT-NH   33 (37)
T ss_dssp             CCCCCCEETTTTEECSSHHHHHHHHHH-HC
T ss_pred             CCCCCcCCCCCCCccCCHHHHHHHHHH-Hc
Confidence            456799999999999999999999985 74

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.07  E-value=0.00022  Score=43.31  Aligned_cols=29  Identities=21%  Similarity=0.244  Sum_probs=25.6

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+.|++.|..+..|..||.. |-
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~   33 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLV-HG   33 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTT-TS
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHH-hc
Confidence            356799999999999999999999985 73

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.07  E-value=0.00023  Score=45.20  Aligned_cols=34  Identities=24%  Similarity=0.392  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKT-HA   36 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGG-GC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHH-cC
Confidence            44456677899999999999999999999985 74

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=0.00018  Score=45.54  Aligned_cols=33  Identities=24%  Similarity=0.444  Sum_probs=28.4

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (44)
T 2eoj_A            4 GSSGTGENPYECCECGKVFSRKDQLVSHQKT-HS   36 (44)
T ss_dssp             CCSSSSCCSCEETTTTEECSSHHHHHHHHTT-SS
T ss_pred             ccccCCCcCeeCCCCCCccCCHHHHHHHHHH-cC
Confidence            3446677899999999999999999999985 74

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=0.00026  Score=45.27  Aligned_cols=34  Identities=26%  Similarity=0.427  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HT   36 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTT-TS
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHh-cC
Confidence            34456678899999999999999999999985 74

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=0.00023  Score=45.77  Aligned_cols=34  Identities=26%  Similarity=0.451  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HT   36 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHH-HT
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHH-cC
Confidence            33446678899999999999999999999985 74

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.06  E-value=0.00023  Score=45.39  Aligned_cols=34  Identities=24%  Similarity=0.464  Sum_probs=29.2

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HT   36 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHT-SC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hC
Confidence            44456778899999999999999999999985 74

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.06  E-value=0.00028  Score=45.18  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HT   36 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTT-TT
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHh-hC
Confidence            33446678899999999999999999999985 74

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.05  E-value=0.00021  Score=45.92  Aligned_cols=35  Identities=29%  Similarity=0.412  Sum_probs=29.3

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~   37 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERI-HTR   37 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTT-CCS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHH-cCC
Confidence            33446677899999999999999999999985 853

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.04  E-value=0.00029  Score=44.85  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.+...|..||.. |-
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQAL-HA   36 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHH-HT
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-HC
Confidence            34456678899999999999999999999985 74

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.04  E-value=0.00032  Score=42.24  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=26.2

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~   33 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL-HT   33 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHH-HS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHH-hc
Confidence            4556899999999999999999999985 73

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=0.00029  Score=44.35  Aligned_cols=34  Identities=24%  Similarity=0.510  Sum_probs=28.7

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-HT   36 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTT-TC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhh-cC
Confidence            33446677899999999999999999999985 74

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=0.00031  Score=44.76  Aligned_cols=35  Identities=26%  Similarity=0.408  Sum_probs=29.2

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||..+|-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   37 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT   37 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcC
Confidence            44456677899999999999999999999984474

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=0.00023  Score=44.43  Aligned_cols=31  Identities=29%  Similarity=0.526  Sum_probs=27.1

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   35 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRV-HT   35 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGG-TS
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHH-hC
Confidence            35567899999999999999999999985 74

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=97.01  E-value=0.00027  Score=45.43  Aligned_cols=34  Identities=26%  Similarity=0.435  Sum_probs=28.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRI-HT   36 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHH-HT
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHH-hC
Confidence            34456677899999999999999999999985 74

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.01  E-value=0.00024  Score=40.12  Aligned_cols=26  Identities=27%  Similarity=0.539  Sum_probs=23.4

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||.. |-
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~-h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI-HI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH-HH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH-hc
Confidence            489999999999999999999985 63

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00024  Score=45.26  Aligned_cols=34  Identities=24%  Similarity=0.454  Sum_probs=29.3

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HT   36 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHH-HH
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHh-cC
Confidence            44456778899999999999999999999985 74

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00025  Score=45.20  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=29.2

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT-HV   36 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHH-CC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHH-hC
Confidence            44456677899999999999999999999985 74

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00031  Score=44.78  Aligned_cols=34  Identities=26%  Similarity=0.407  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-HT   36 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGG-GC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHh-cC
Confidence            44456677899999999999999999999985 74

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.00034  Score=44.90  Aligned_cols=34  Identities=24%  Similarity=0.403  Sum_probs=28.7

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-HS   36 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHH-HH
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHH-hC
Confidence            33446677899999999999999999999985 73

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.00028  Score=44.96  Aligned_cols=34  Identities=24%  Similarity=0.416  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HT   36 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTT-TS
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHH-cC
Confidence            44456678899999999999999999999985 74

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.99  E-value=0.00027  Score=45.37  Aligned_cols=32  Identities=34%  Similarity=0.501  Sum_probs=27.9

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRS-HT   36 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHH-HS
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHh-cC
Confidence            345677899999999999999999999985 74

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.00036  Score=44.78  Aligned_cols=33  Identities=24%  Similarity=0.463  Sum_probs=28.2

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HT   36 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH-CS
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hC
Confidence            3445677899999999999999999999985 74

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.0004  Score=44.23  Aligned_cols=33  Identities=24%  Similarity=0.470  Sum_probs=28.4

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -.-|....||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-HT   36 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGG-GS
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHH-hC
Confidence            3445677899999999999999999999985 74

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.00038  Score=44.50  Aligned_cols=32  Identities=28%  Similarity=0.462  Sum_probs=28.0

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRV-HT   36 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGG-GC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHH-cC
Confidence            345677899999999999999999999985 74

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.98  E-value=0.00032  Score=43.89  Aligned_cols=30  Identities=23%  Similarity=0.378  Sum_probs=26.7

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   34 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERI-HT   34 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGG-CC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHH-hC
Confidence            4567899999999999999999999985 75

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.98  E-value=0.0003  Score=45.36  Aligned_cols=32  Identities=28%  Similarity=0.447  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HS   36 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTT-TT
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHh-cC
Confidence            345677899999999999999999999985 74

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.98  E-value=0.00029  Score=45.07  Aligned_cols=34  Identities=24%  Similarity=0.380  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-HT   36 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTT-TC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhh-cC
Confidence            34456678899999999999999999999985 74

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.98  E-value=0.00038  Score=44.51  Aligned_cols=34  Identities=26%  Similarity=0.432  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HT   36 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGG-TS
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhh-cC
Confidence            34456678899999999999999999999985 74

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.98  E-value=0.00038  Score=44.37  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HT   36 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHH-HS
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHh-cC
Confidence            345677899999999999999999999985 74

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=96.98  E-value=0.00031  Score=43.71  Aligned_cols=29  Identities=28%  Similarity=0.543  Sum_probs=25.8

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+.|++.|.++..|..||.. |-
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   30 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNV-HR   30 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHT-TC
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHH-cC
Confidence            356799999999999999999999985 75

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.97  E-value=0.0003  Score=44.81  Aligned_cols=32  Identities=28%  Similarity=0.531  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRI-HT   36 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGG-TS
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHh-cC
Confidence            345677899999999999999999999985 74

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.97  E-value=0.00038  Score=44.54  Aligned_cols=34  Identities=21%  Similarity=0.312  Sum_probs=28.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-HT   36 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTT-TT
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHH-hC
Confidence            34456677899999999999999999999985 74

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.96  E-value=0.00027  Score=40.46  Aligned_cols=25  Identities=28%  Similarity=0.644  Sum_probs=23.1

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|+.|++.|.+...|..|+.. |
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~-h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRV-H   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTT-S
T ss_pred             cCccCCCCCcccCCHHHHHHHHHh-c
Confidence            589999999999999999999984 6

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.96  E-value=0.00038  Score=44.53  Aligned_cols=33  Identities=24%  Similarity=0.452  Sum_probs=28.3

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HT   36 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHTT-TC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHHH-hC
Confidence            3345677899999999999999999999985 74

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=0.00032  Score=45.01  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=28.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRI-HT   36 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTT-TS
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHH-hC
Confidence            33446678899999999999999999999985 74

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=0.00036  Score=44.48  Aligned_cols=32  Identities=28%  Similarity=0.465  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRI-HT   36 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTT-TT
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHh-cC
Confidence            345677899999999999999999999985 74

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.94  E-value=0.00033  Score=44.98  Aligned_cols=34  Identities=24%  Similarity=0.475  Sum_probs=29.2

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-HF   36 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHH-HH
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHH-Hc
Confidence            44456778899999999999999999999985 74

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=96.94  E-value=0.00035  Score=44.53  Aligned_cols=33  Identities=24%  Similarity=0.387  Sum_probs=28.2

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2em9_A            4 GSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HS   36 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHGGG-GT
T ss_pred             CCCCCCCcCeECCccccccCChHHHHHHHHH-hC
Confidence            3345677899999999999999999999985 74

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.93  E-value=0.00035  Score=44.70  Aligned_cols=34  Identities=26%  Similarity=0.461  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HT   36 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHH-HC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-hC
Confidence            33446677899999999999999999999985 74

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.93  E-value=0.00035  Score=44.70  Aligned_cols=34  Identities=24%  Similarity=0.416  Sum_probs=28.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HT   36 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTT-TT
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHH-cC
Confidence            34456678899999999999999999999985 74

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.93  E-value=0.00035  Score=44.66  Aligned_cols=34  Identities=26%  Similarity=0.454  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HT   36 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHH-HH
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHh-cC
Confidence            44456678899999999999999999999985 74

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.93  E-value=0.00044  Score=44.40  Aligned_cols=31  Identities=26%  Similarity=0.420  Sum_probs=27.3

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.+...|..||.. |-
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRI-HT   36 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHH-HT
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHH-cC
Confidence            35677899999999999999999999985 74

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00036  Score=44.62  Aligned_cols=34  Identities=24%  Similarity=0.395  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-HT   36 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHH-HS
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHH-HC
Confidence            33446678899999999999999999999985 74

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00044  Score=44.04  Aligned_cols=34  Identities=21%  Similarity=0.292  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HS   36 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHH-CC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHh-cC
Confidence            33446677899999999999999999999985 74

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00041  Score=44.34  Aligned_cols=34  Identities=29%  Similarity=0.438  Sum_probs=28.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HS   36 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGG-GS
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHH-hc
Confidence            33446678899999999999999999999985 74

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=96.91  E-value=0.00038  Score=42.51  Aligned_cols=26  Identities=27%  Similarity=0.729  Sum_probs=23.7

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||.. |-
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~-H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITL-HE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHH-HT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHH-hC
Confidence            489999999999999999999985 74

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.91  E-value=0.00037  Score=44.76  Aligned_cols=33  Identities=18%  Similarity=0.249  Sum_probs=28.3

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2em5_A            4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HT   36 (46)
T ss_dssp             CCCCCCSCSEECSSSCCEESSHHHHHHHHTT-TS
T ss_pred             cCCCCCCCCeECCcCCCccCCHHHHHHHHHH-hC
Confidence            3445678899999999999999999999985 74

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.91  E-value=0.00024  Score=41.16  Aligned_cols=25  Identities=36%  Similarity=0.721  Sum_probs=23.1

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|+.|++.|..+..|..||.. |
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~-H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG-H   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT-C
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh-c
Confidence            589999999999999999999984 6

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=96.91  E-value=0.00038  Score=44.35  Aligned_cols=34  Identities=26%  Similarity=0.472  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HT   36 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGG-SS
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHH-hC
Confidence            33446678899999999999999999999985 74

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=96.91  E-value=0.00047  Score=44.07  Aligned_cols=34  Identities=21%  Similarity=0.269  Sum_probs=28.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV-HV   36 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGG-GS
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHH-cC
Confidence            34446678899999999999999999999985 74

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.90  E-value=0.00037  Score=44.58  Aligned_cols=34  Identities=26%  Similarity=0.402  Sum_probs=29.1

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HT   36 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTT-TC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHH-cC
Confidence            34456678899999999999999999999985 74

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.90  E-value=0.00046  Score=43.93  Aligned_cols=34  Identities=21%  Similarity=0.288  Sum_probs=28.7

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-HT   36 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTT-TT
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHH-cC
Confidence            33446677899999999999999999999985 74

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.90  E-value=0.00041  Score=44.37  Aligned_cols=32  Identities=25%  Similarity=0.474  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMV-HT   36 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGG-GT
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHH-hC
Confidence            345677899999999999999999999985 74

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.90  E-value=0.00041  Score=44.68  Aligned_cols=33  Identities=27%  Similarity=0.387  Sum_probs=28.3

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-HT   36 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHH-HH
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHH-cC
Confidence            3445677899999999999999999999985 74

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.90  E-value=0.00043  Score=44.42  Aligned_cols=31  Identities=29%  Similarity=0.480  Sum_probs=27.2

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.+...|..||.. |.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRV-HS   36 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGG-SC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHH-hC
Confidence            34567899999999999999999999985 74

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=0.00039  Score=44.65  Aligned_cols=34  Identities=18%  Similarity=0.314  Sum_probs=29.3

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-HT   36 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGG-TS
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHH-hC
Confidence            44456778899999999999999999999985 74

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=0.00051  Score=44.06  Aligned_cols=32  Identities=22%  Similarity=0.386  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HM   36 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGG-GG
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHh-cC
Confidence            345677899999999999999999999985 74

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=96.89  E-value=0.0004  Score=44.42  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-HT   36 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTG-GG
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHh-cC
Confidence            33446677899999999999999999999985 74

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=96.89  E-value=0.00049  Score=44.16  Aligned_cols=33  Identities=24%  Similarity=0.427  Sum_probs=28.4

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRV-HT   36 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHH-HS
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHH-cC
Confidence            3446678899999999999999999999985 74

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=0.00035  Score=44.67  Aligned_cols=34  Identities=29%  Similarity=0.390  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS-HE   36 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHH-HH
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHH-hC
Confidence            44456678899999999999999999999985 73

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=0.00049  Score=44.16  Aligned_cols=34  Identities=26%  Similarity=0.328  Sum_probs=28.6

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |-.-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HT   36 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTT-TS
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHH-cC
Confidence            33445677899999999999999999999985 74

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=0.00034  Score=44.59  Aligned_cols=34  Identities=29%  Similarity=0.465  Sum_probs=29.2

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HT   36 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTT-SC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHH-hC
Confidence            44456678899999999999999999999985 74

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=96.88  E-value=0.00044  Score=44.39  Aligned_cols=33  Identities=24%  Similarity=0.446  Sum_probs=28.3

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|....||.|+.|++.|.+...|..||.. |-
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM-HT   36 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGG-GC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cC
Confidence            3445677899999999999999999999985 75

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=0.00041  Score=44.34  Aligned_cols=34  Identities=24%  Similarity=0.406  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-HT   36 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHH-HT
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHH-cC
Confidence            33445677899999999999999999999985 74

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.87  E-value=0.00042  Score=44.13  Aligned_cols=34  Identities=24%  Similarity=0.366  Sum_probs=28.7

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HT   36 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHH-HS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHH-hC
Confidence            33445677899999999999999999999985 74

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=96.87  E-value=0.00043  Score=44.43  Aligned_cols=32  Identities=22%  Similarity=0.383  Sum_probs=27.9

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKL-HT   36 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHH-HS
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHH-cC
Confidence            345677899999999999999999999985 74

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=96.86  E-value=0.00041  Score=39.41  Aligned_cols=26  Identities=19%  Similarity=0.396  Sum_probs=23.5

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..|+.. |-
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKT-KH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH-HT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHH-Hc
Confidence            389999999999999999999985 64

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.86  E-value=0.00043  Score=44.09  Aligned_cols=34  Identities=18%  Similarity=0.256  Sum_probs=28.7

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRV-HM   36 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTT-TC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHH-hC
Confidence            34446677899999999999999999999985 74

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.85  E-value=0.00044  Score=44.20  Aligned_cols=34  Identities=26%  Similarity=0.489  Sum_probs=28.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-HT   36 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHH-HH
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHH-cC
Confidence            34456678899999999999999999999985 74

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=96.84  E-value=0.00047  Score=45.77  Aligned_cols=34  Identities=24%  Similarity=0.487  Sum_probs=27.6

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhccccc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFE  349 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK~E  349 (431)
                      |....||.|+.|++.|.++..|..||..+|-..+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            3456899999999999999999999994486543

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.84  E-value=0.00051  Score=44.07  Aligned_cols=34  Identities=24%  Similarity=0.435  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-HS   36 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTT-TC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHH-hC
Confidence            34456678899999999999999999999985 74

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.83  E-value=0.00036  Score=44.63  Aligned_cols=32  Identities=25%  Similarity=0.415  Sum_probs=27.9

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HT   36 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTT-SC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHh-hC
Confidence            345677899999999999999999999985 74

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.83  E-value=0.00047  Score=44.07  Aligned_cols=34  Identities=26%  Similarity=0.433  Sum_probs=28.8

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.+...|..||.. |-
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-HS   36 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHH-SC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHH-hC
Confidence            33445677899999999999999999999985 74

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.82  E-value=0.00036  Score=44.79  Aligned_cols=32  Identities=28%  Similarity=0.484  Sum_probs=27.9

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HT   36 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHH-HS
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHH-hC
Confidence            345677899999999999999999999985 74

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.82  E-value=0.00049  Score=44.15  Aligned_cols=32  Identities=25%  Similarity=0.460  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRI-HT   36 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHH-HC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHH-hC
Confidence            345677899999999999999999999985 74

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.81  E-value=0.00048  Score=42.71  Aligned_cols=29  Identities=21%  Similarity=0.435  Sum_probs=25.1

Q ss_pred             cccCcccCcccchhhhhhHHHHHH-Hhhhcc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAH-VASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAH-msS~HY  346 (431)
                      .+..||.|+.|++.|.++..|..| +. +|-
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~-~H~   34 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQ-KHS   34 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHH-HTC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHH-Hcc
Confidence            456799999999999999999999 65 474

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=0.00046  Score=43.94  Aligned_cols=32  Identities=28%  Similarity=0.448  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQRI-HT   36 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHGG-GS
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHHH-cC
Confidence            345667899999999999999999999985 74

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=0.00039  Score=44.47  Aligned_cols=34  Identities=26%  Similarity=0.424  Sum_probs=28.7

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-HT   36 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHH-HH
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHh-cC
Confidence            33446678899999999999999999999985 74

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.80  E-value=0.00052  Score=43.85  Aligned_cols=32  Identities=25%  Similarity=0.453  Sum_probs=27.8

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRT-HA   36 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHH-HT
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHH-cC
Confidence            345677899999999999999999999985 74

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.79  E-value=0.00069  Score=43.21  Aligned_cols=31  Identities=19%  Similarity=0.418  Sum_probs=27.2

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.+...|..||.. |-
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   34 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQ-TH   34 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHH-HT
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHh-hC
Confidence            35567899999999999999999999985 74

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.78  E-value=0.00053  Score=43.85  Aligned_cols=32  Identities=28%  Similarity=0.505  Sum_probs=27.9

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|.+..||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKI-HT   36 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHH-TS
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHH-cC
Confidence            345677899999999999999999999985 74

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.79  E-value=0.00022  Score=41.15  Aligned_cols=26  Identities=35%  Similarity=0.600  Sum_probs=23.3

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.....|..||.. |-
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQ-HT   26 (29)
Confidence            389999999999999999999984 73

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.74  E-value=0.00039  Score=44.46  Aligned_cols=33  Identities=18%  Similarity=0.352  Sum_probs=28.3

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..-|.+..||.|+.|++.|.+...|..||.. |-
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HT   36 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTGGG-GS
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cC
Confidence            3345677899999999999999999999985 74

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.73  E-value=0.0006  Score=43.57  Aligned_cols=32  Identities=22%  Similarity=0.309  Sum_probs=27.6

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVL-HM   36 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHH-HS
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHH-hC
Confidence            345667899999999999999999999985 74

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.71  E-value=0.00032  Score=44.52  Aligned_cols=32  Identities=22%  Similarity=0.332  Sum_probs=27.6

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HT   36 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHH-HC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHH-hC
Confidence            345567899999999999999999999985 74

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.71  E-value=0.00052  Score=43.88  Aligned_cols=31  Identities=29%  Similarity=0.494  Sum_probs=27.3

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.++..|..||.. |-
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRT-HT   36 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHH-HS
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHH-cC
Confidence            35667899999999999999999999985 74

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.70  E-value=0.00048  Score=44.02  Aligned_cols=32  Identities=22%  Similarity=0.442  Sum_probs=27.7

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-|....||.|+.|++.|.++..|..||.. |-
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HT   36 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGG-GS
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cC
Confidence            345667899999999999999999999985 74

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.70  E-value=0.00081  Score=43.27  Aligned_cols=30  Identities=23%  Similarity=0.340  Sum_probs=26.4

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRI-HT   36 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHH-HS
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHH-hC
Confidence            3467899999999999999999999985 74

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.69  E-value=0.0007  Score=50.58  Aligned_cols=36  Identities=22%  Similarity=0.259  Sum_probs=30.6

Q ss_pred             eeeccccccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          311 IHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       311 tHSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      ..|.-+.+..||.|..|++.|.++..|..||.. |-.
T Consensus         3 ~~~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~-Htg   38 (66)
T 2epp_A            3 SGSSGLREAGILPCGLCGKVFTDANRLRQHEAQ-HGV   38 (66)
T ss_dssp             CCSCSCCCCCCCCCTTTCCCCSCHHHHHHHHHH-HTT
T ss_pred             CCCCCCCCccCcCCCCCCCccCCHHHHHhhhhh-hCC
Confidence            344457788999999999999999999999995 864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.69  E-value=0.00054  Score=43.77  Aligned_cols=30  Identities=20%  Similarity=0.450  Sum_probs=26.8

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~   36 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRI-HT   36 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTT-TS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHH-hC
Confidence            4567899999999999999999999985 74

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=96.68  E-value=0.00076  Score=39.68  Aligned_cols=26  Identities=27%  Similarity=0.666  Sum_probs=23.5

Q ss_pred             CcccCc--ccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICP--KCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCP--KCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+  .|++.|.++..|..||.. |-
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~-H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRT-HT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHH-hc
Confidence            489998  999999999999999985 74

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.68  E-value=0.00072  Score=43.37  Aligned_cols=30  Identities=20%  Similarity=0.379  Sum_probs=26.5

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.++..|..||.. |-
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRV-HT   36 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHH-HH
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHH-Hc
Confidence            4467899999999999999999999985 74

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.71  E-value=0.00027  Score=40.53  Aligned_cols=26  Identities=31%  Similarity=0.747  Sum_probs=23.5

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.....|..||.. |.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~-h~   27 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRI-HT   27 (30)
Confidence            589999999999999999999985 63

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.66  E-value=0.00085  Score=43.02  Aligned_cols=30  Identities=27%  Similarity=0.504  Sum_probs=26.5

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |.+..||.|+.|++.|.++..|..||.. |-
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWIT-HT   36 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTH-HH
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHH-cC
Confidence            3567899999999999999999999985 74

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=96.65  E-value=0.00083  Score=41.58  Aligned_cols=31  Identities=23%  Similarity=0.325  Sum_probs=26.7

Q ss_pred             cccccCcccCc--ccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICP--KCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCP--KCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .+.+..||.|+  .|++.|.++..|..|+.. |-
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~   34 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRW-HT   34 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHH-HH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cC
Confidence            35677899998  699999999999999985 74

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.64  E-value=0.00077  Score=43.06  Aligned_cols=30  Identities=27%  Similarity=0.470  Sum_probs=26.8

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRI-HT   36 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTT-TS
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHH-hC
Confidence            4567899999999999999999999985 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.61  E-value=0.00083  Score=47.16  Aligned_cols=36  Identities=22%  Similarity=0.417  Sum_probs=29.0

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      |..-|....||.|+.|++.|.+...|..||...|-.
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~   41 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   41 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC
Confidence            445566778999999999999999999999755653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.55  E-value=0.00087  Score=42.79  Aligned_cols=30  Identities=33%  Similarity=0.578  Sum_probs=26.7

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|..+..|..||.. |-
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~   34 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRS-HD   34 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHH-HS
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHH-cc
Confidence            4567899999999999999999999985 74

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=96.52  E-value=0.0007  Score=45.12  Aligned_cols=30  Identities=23%  Similarity=0.466  Sum_probs=20.3

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+.|++.|.+...|..||..+|-
T Consensus        26 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A           26 TNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             TSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            344577777777777777777777654464

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=96.51  E-value=0.0006  Score=45.60  Aligned_cols=34  Identities=18%  Similarity=0.324  Sum_probs=28.7

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|.++..|..||.. |-
T Consensus        15 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   48 (54)
T 1yui_A           15 PRSRSQSEQPATCPICYAVIRQSRNLRRHLEL-RH   48 (54)
T ss_dssp             CHHHHTSSCCEECTTTCCEESSHHHHHHHHHH-HT
T ss_pred             HHHhcCCCCCccCCCCCcccCCHHHHHHHHHH-hc
Confidence            44445667899999999999999999999985 74

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=96.46  E-value=0.00083  Score=45.54  Aligned_cols=30  Identities=20%  Similarity=0.512  Sum_probs=24.9

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |....||.|+.|++.|.+...|..||...|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H   34 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSH   34 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHc
Confidence            445678999999999999999999988646

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=96.45  E-value=0.0003  Score=42.56  Aligned_cols=26  Identities=23%  Similarity=0.783  Sum_probs=23.3

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..+..||.. |-
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~-H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKT-AF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTS-SS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH-Hc
Confidence            389999999999999999999984 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=96.45  E-value=0.0014  Score=45.58  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=25.5

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..+...+||.|+.|++.|.+...|..||.. |-
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~   41 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTV-HT   41 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHH-HC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHH-cC
Confidence            344456789999999999999999999985 74

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.44  E-value=0.0014  Score=45.57  Aligned_cols=33  Identities=27%  Similarity=0.368  Sum_probs=26.2

Q ss_pred             eccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          313 SLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       313 SLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      +.-|....||.|+.|++.|.+...|..||.. |-
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~   38 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRV-HT   38 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHG-GG
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHh-cC
Confidence            4445667888999999999998888888885 64

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.35  E-value=0.0018  Score=38.10  Aligned_cols=26  Identities=31%  Similarity=0.689  Sum_probs=23.7

Q ss_pred             CcccCc--ccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICP--KCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCP--KCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+  .|++.|.++..|..||.. |-
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~-H~   29 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKS-HQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG-GT
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHH-cc
Confidence            589999  999999999999999985 74

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=96.35  E-value=0.0015  Score=42.96  Aligned_cols=29  Identities=28%  Similarity=0.549  Sum_probs=22.9

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |....||.|+.|++.|.+...|..||.+ |
T Consensus        24 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h   52 (57)
T 1bbo_A           24 HTDVRPYHCTYCNFSFKTKGNLTKHMKS-K   52 (57)
T ss_dssp             TSSCCCEECSSSSCEESSHHHHHHHHHS-S
T ss_pred             cCCCCCccCCCCCchhcCHHHHHHHHHH-h
Confidence            3445688888888888888888888875 5

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.33  E-value=0.0013  Score=37.35  Aligned_cols=26  Identities=23%  Similarity=0.491  Sum_probs=23.3

Q ss_pred             CcccCc--ccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICP--KCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCP--KCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+  .|++.|.+...|..|+.. |-
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~-H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKI-HT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGG-GT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHH-hC
Confidence            489999  999999999999999985 73

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.30  E-value=0.0018  Score=43.38  Aligned_cols=31  Identities=26%  Similarity=0.559  Sum_probs=27.0

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      +.+..||.|+.|++.|.+...|..||..+|-
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   37 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHT   37 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            4566799999999999999999999974574

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=96.27  E-value=0.0013  Score=43.16  Aligned_cols=24  Identities=25%  Similarity=0.454  Sum_probs=13.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHhh
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      .||.|+.|++.|.+...|..||..
T Consensus        31 ~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C           31 KPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcCCCCCcchhCCHHHHHHHHHH
Confidence            455555555555555555555553

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=96.26  E-value=0.0016  Score=42.76  Aligned_cols=27  Identities=19%  Similarity=0.323  Sum_probs=22.5

Q ss_pred             cCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          319 YGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       319 yGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..||.|+.|++.|.+...|..||.. |-
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~   28 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRT-HT   28 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHH-HH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHH-cC
Confidence            3699999999999999999999995 74

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=96.26  E-value=0.0018  Score=43.81  Aligned_cols=28  Identities=36%  Similarity=0.712  Sum_probs=25.2

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      ...||.|+.|++.|.+...|..||...|
T Consensus        37 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A           37 NVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             SCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            5679999999999999999999998744

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.23  E-value=0.0016  Score=42.37  Aligned_cols=31  Identities=23%  Similarity=0.282  Sum_probs=27.1

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .+....||.|+.|++.|.+...|..||.. |-
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLS-HS   36 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGG-SC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHh-cC
Confidence            34567899999999999999999999985 74

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.21  E-value=0.002  Score=39.38  Aligned_cols=29  Identities=28%  Similarity=0.590  Sum_probs=25.3

Q ss_pred             cccCcccCc--ccchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICP--KCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCP--KCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+  .|++.|..+..|..||.. |-
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~   32 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHK-HE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHH-HH
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHH-hC
Confidence            356799999  799999999999999985 74

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=96.15  E-value=0.0023  Score=42.59  Aligned_cols=26  Identities=23%  Similarity=0.618  Sum_probs=23.9

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||.. |.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~-h~   26 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRS-HT   26 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHH-hC
Confidence            489999999999999999999985 74

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.15  E-value=0.0024  Score=42.83  Aligned_cols=31  Identities=19%  Similarity=0.215  Sum_probs=26.4

Q ss_pred             ccccCcccCcc--cchhhhhhHHHHHHHhhhccc
Q 038616          316 RKKYGPYICPK--CIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       316 ~~KyGPYtCPK--CN~VFdTSQkFAAHmsS~HYK  347 (431)
                      +....||.|+.  |++.|.++..|..||.. |-.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~-Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV-HTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHH-HSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCC
Confidence            34567999986  99999999999999985 853

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.14  E-value=0.0021  Score=44.99  Aligned_cols=30  Identities=17%  Similarity=0.135  Sum_probs=25.1

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~   31 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRK-HA   31 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHH-HH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHH-hh
Confidence            3456799999999999999999999985 63

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=96.09  E-value=0.0024  Score=41.87  Aligned_cols=25  Identities=24%  Similarity=0.557  Sum_probs=23.2

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhcc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ||.|+.|++.|.+...|..||.. |-
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~-h~   25 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRT-HT   25 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH-TS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHh-cC
Confidence            79999999999999999999985 74

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=96.09  E-value=0.002  Score=43.24  Aligned_cols=25  Identities=24%  Similarity=0.485  Sum_probs=23.2

Q ss_pred             cccCcccCcccchhhhhhHHHHHHH
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHV  341 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHm  341 (431)
                      .+..||+|+.|++.|..+..|..||
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4567999999999999999999999

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=96.08  E-value=0.0017  Score=44.82  Aligned_cols=26  Identities=23%  Similarity=0.674  Sum_probs=16.7

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhh
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      +..||.|+.|++.|.+...|..|+..
T Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           46 GQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHh
Confidence            34566666666666666666666653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=96.04  E-value=0.0019  Score=46.72  Aligned_cols=29  Identities=28%  Similarity=0.587  Sum_probs=19.5

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |.+..||.|+.|++.|.++..|..||.. |
T Consensus        27 Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-H   55 (60)
T 4gzn_C           27 HLGYRPRSCPECGKCFRDQSEVNRHLKV-H   55 (60)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHGGG-G
T ss_pred             hCCCcCeECCCCCCCcCCHHHHHHHhCc-c
Confidence            4455677777777777777777777663 6

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.04  E-value=0.0029  Score=43.63  Aligned_cols=29  Identities=17%  Similarity=0.304  Sum_probs=22.2

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+.|++.|.+...|..||.. |-
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   33 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERI-HC   33 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGG-GC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHH-cC
Confidence            445678888888888888888888875 63

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.04  E-value=0.0013  Score=45.83  Aligned_cols=31  Identities=23%  Similarity=0.445  Sum_probs=26.6

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      |....||.|+.|++.|.+...|..||.. |-.
T Consensus        37 h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~   67 (72)
T 1x6e_A           37 HTGEKPYKCLECGKAFSQNSGLINHQRI-HTS   67 (72)
T ss_dssp             GGCSCCEECSSSCCEESSHHHHHHHHHH-HHS
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHh-cCC
Confidence            4456799999999999999999999985 743

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=96.04  E-value=0.002  Score=45.30  Aligned_cols=30  Identities=30%  Similarity=0.665  Sum_probs=22.4

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |+
T Consensus        60 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~   89 (89)
T 2wbs_A           60 HTGHRPFQCQKCDRAFSRSDHLALHMKR-HF   89 (89)
T ss_dssp             HHCCCCEECSSSSCEESSHHHHHHHGGG-GC
T ss_pred             cCCCCCccCCCCCcccCCHHHHHHHHHh-hC
Confidence            3445678888888888888888888874 64

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.96  E-value=0.0035  Score=46.48  Aligned_cols=33  Identities=15%  Similarity=0.184  Sum_probs=28.3

Q ss_pred             eeeccccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          311 IHSLSRKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       311 tHSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      .|-.-|.+..||.|+.|++.|.+...|..||..
T Consensus        70 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             CCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             HHhhccCCCcceECCCCCCccCCHHHHHHHHHH
Confidence            344456677899999999999999999999986

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.90  E-value=0.0033  Score=43.90  Aligned_cols=32  Identities=25%  Similarity=0.491  Sum_probs=25.7

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .-|....||.|+.|++.|.+...|..||...|
T Consensus         8 ~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~   39 (86)
T 1x6h_A            8 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   39 (86)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             ceecCCCCCcCCCCCCccCCHHHHHHHHHHhc
Confidence            34556788999999999999999999988634

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=95.90  E-value=0.0027  Score=45.87  Aligned_cols=27  Identities=19%  Similarity=0.535  Sum_probs=24.5

Q ss_pred             cCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          319 YGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       319 yGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..||.|+.|++.|.+...|..||.. |.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~-Ht   28 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRA-HL   28 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHH-HH
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHH-hC
Confidence            3699999999999999999999985 84

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.89  E-value=0.0031  Score=44.13  Aligned_cols=30  Identities=27%  Similarity=0.362  Sum_probs=26.1

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      +..||.|+.|++.|.+...|..||...|-.
T Consensus        35 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A           35 AALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             TTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            357999999999999999999999766643

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=95.85  E-value=0.0029  Score=44.02  Aligned_cols=30  Identities=23%  Similarity=0.452  Sum_probs=26.0

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus        40 H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~   69 (74)
T 2lce_A           40 HTGEKPYRCNICGAQFNRPANLKTHTRI-HS   69 (74)
T ss_dssp             HCCCCSEECTTTCCEESCHHHHHHHHHH-HC
T ss_pred             cCCCCCEECCCCCchhCCHHHHHHHHHh-cC
Confidence            3445789999999999999999999985 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.82  E-value=0.0043  Score=43.47  Aligned_cols=31  Identities=23%  Similarity=0.511  Sum_probs=23.3

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .+.+..||.|+.|++.|.+...|..||.. |-
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~   42 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRT-HT   42 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHH-cC
Confidence            34456788888888888888888888874 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.82  E-value=0.0021  Score=44.35  Aligned_cols=29  Identities=14%  Similarity=0.328  Sum_probs=25.7

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      -|....||.|+.|++.|.+...|..||..
T Consensus        31 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~   59 (70)
T 1x5w_A           31 IHCTDRPFKCNYCSFDTKQPSNLSKHMKK   59 (70)
T ss_dssp             GGCCSCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             HcCCCCCEeCCCCCCccCCHHHHHHHHHH
Confidence            34556799999999999999999999986

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.80  E-value=0.0028  Score=44.41  Aligned_cols=30  Identities=23%  Similarity=0.527  Sum_probs=26.1

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.|++.|.+...|..||.. |-
T Consensus        41 h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~   70 (77)
T 2cot_A           41 HTGEKPYKCDECGKAFIQRSHLIGHHRV-HT   70 (77)
T ss_dssp             TCCSCSEECSSSCCEESSHHHHHHHGGG-SC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHH-hC
Confidence            4456799999999999999999999985 74

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=95.78  E-value=0.0042  Score=44.52  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=24.6

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|.+..||.|+.|++.|.+...|..||.. |-
T Consensus        69 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~   99 (100)
T 2ebt_A           69 KHTGAKPFQCGVCNRSFSRSDHLALHMKR-HQ   99 (100)
T ss_dssp             HHTSCCSCBCSSSCCBCSSHHHHHHHHHH-HC
T ss_pred             HhCCCCCeECCCCcCccCCHHHHHHHHHH-hC
Confidence            34556789999999999999999999884 63

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.75  E-value=0.0043  Score=43.47  Aligned_cols=27  Identities=19%  Similarity=0.525  Sum_probs=24.6

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.+...|..||...|-
T Consensus        44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           44 AKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             SSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            689999999999999999999997553

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.62  E-value=0.0051  Score=39.16  Aligned_cols=30  Identities=27%  Similarity=0.462  Sum_probs=26.4

Q ss_pred             ccccCcccCc--ccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICP--KCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCP--KCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|.  .|++.|.++..|..||.. |-
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~   38 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRS-HS   38 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTT-SC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHH-hC
Confidence            4567899997  999999999999999985 75

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=95.60  E-value=0.0074  Score=43.96  Aligned_cols=34  Identities=26%  Similarity=0.433  Sum_probs=27.3

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..+|.+...||.|+.|++.|.+...|..||.. |-
T Consensus         8 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~   41 (106)
T 2ee8_A            8 GRLPSKTKKEFICKFCGRHFTKSYNLLIHERT-HT   41 (106)
T ss_dssp             CCCCCCCCCCCBCSSSCCBCSSHHHHHHHHHH-HC
T ss_pred             CcCCcCCCcCeECCCCCCccCCHHHHHHHHHH-cC
Confidence            35667778888899999999888888888885 63

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=95.60  E-value=0.0036  Score=43.18  Aligned_cols=23  Identities=26%  Similarity=0.504  Sum_probs=12.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHh
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVA  342 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHms  342 (431)
                      .||.|+.|++.|.+...|..||.
T Consensus        56 ~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A           56 KPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CCEECTTTSCEESSHHHHHHHHH
T ss_pred             CCCcCCCcchhhCChHHHHHHHH
Confidence            44555555555555555555554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=95.59  E-value=0.005  Score=44.87  Aligned_cols=31  Identities=29%  Similarity=0.569  Sum_probs=22.7

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|.+..||.|+.|++.|.+...|..||.. |.
T Consensus        67 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~   97 (106)
T 2ee8_A           67 IHSKEKPFKCQECGKGFCQSRTLAVHKTL-HM   97 (106)
T ss_dssp             GSCCCCTTSCSSSCCCCSSHHHHHHHHHH-TT
T ss_pred             HhCCCCCeECCCcCCcccCHHHHHHHHHH-hC
Confidence            34455678888888888888888888874 64

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.58  E-value=0.0036  Score=46.51  Aligned_cols=34  Identities=18%  Similarity=0.267  Sum_probs=28.5

Q ss_pred             eeccccccCcccCcccchhhh-hhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFL-TSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFd-TSQkFAAHmsS~HY  346 (431)
                      |..-|....||.|+.|++.|. +...|..||.. |-
T Consensus        15 h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~-h~   49 (98)
T 2gqj_A           15 WQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEV-CQ   49 (98)
T ss_dssp             HHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHH-HH
T ss_pred             HHHHhccCCCcCCCCCCCChhhhHHHHHHHHHH-Hc
Confidence            444566778999999999999 99999999985 63

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=95.55  E-value=0.0052  Score=47.12  Aligned_cols=29  Identities=21%  Similarity=0.457  Sum_probs=19.7

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ...||.|+.|++.|.++..|..||..+|-
T Consensus        53 ~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           53 AAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            44577777777777777777777765563

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.53  E-value=0.0023  Score=47.19  Aligned_cols=29  Identities=28%  Similarity=0.675  Sum_probs=17.3

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      ....||.|+.|++.|.+...|..||...|
T Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           90 TGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             SSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            34456666666666666666666665445

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.51  E-value=0.006  Score=43.48  Aligned_cols=27  Identities=30%  Similarity=0.722  Sum_probs=22.5

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.+...|..||..+|-
T Consensus        64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           64 KPYICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             CceECCCccchhCCHHHHHHHHHHhcC
Confidence            688899999999888888888875574

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=95.47  E-value=0.0048  Score=43.41  Aligned_cols=27  Identities=26%  Similarity=0.493  Sum_probs=17.2

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      ...||.|+.|++.|.+...|..||.. |
T Consensus        59 ~~~~~~C~~C~~~f~~~~~l~~H~~~-H   85 (90)
T 1a1h_A           59 GEKPFACDICGRKFARSDERKRHTKI-H   85 (90)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHGG-G
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHH-h
Confidence            34566666666666666666666663 5

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.36  E-value=0.0065  Score=43.38  Aligned_cols=26  Identities=23%  Similarity=0.437  Sum_probs=17.0

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhh
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      ...||.|+.|++.|.+...|..||..
T Consensus        61 ~~~~~~C~~C~~~f~~~~~l~~H~~~   86 (96)
T 2dmd_A           61 DERPFKCQICPYASRNSSQLTVHLRS   86 (96)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHH
Confidence            34566677777777666666666664

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.35  E-value=0.008  Score=44.34  Aligned_cols=34  Identities=12%  Similarity=0.126  Sum_probs=28.0

Q ss_pred             eeeccccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          311 IHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       311 tHSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .+.-.+....||.|+.|++.|.+...+..||.. |
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H   39 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERL-C   39 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH-H
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHH-C
Confidence            344456677899999999999999999999985 7

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=95.30  E-value=0.017  Score=41.28  Aligned_cols=30  Identities=23%  Similarity=0.429  Sum_probs=25.2

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |....||.|+.|++.|.+...|..||...|
T Consensus        26 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C           26 HTGEKPFACDICGRKFARSDERKRHRDIQH   55 (88)
T ss_dssp             HHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence            344578999999999999999999999744

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.23  E-value=0.0029  Score=41.39  Aligned_cols=30  Identities=20%  Similarity=0.544  Sum_probs=26.2

Q ss_pred             ccccCcccC--cccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYIC--PKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtC--PKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |.+..||.|  +.|++.|..+..+..||.. |-
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~-H~   44 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HL   44 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHH-HT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHH-cc
Confidence            556789999  5899999999999999985 74

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.22  E-value=0.0058  Score=45.11  Aligned_cols=30  Identities=27%  Similarity=0.537  Sum_probs=20.3

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |.+..||.|+.|++.|.+...|..||..+|
T Consensus        64 H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   93 (107)
T 1wjp_A           64 KCEYKKLTCLECMRTFKSSFSIWRHQVEVH   93 (107)
T ss_dssp             HCSTGGGEEGGGTEECSSHHHHHHHHHHTS
T ss_pred             cCCCCCccCccccchhCCHHHHHHHHHHHc
Confidence            455567777777777777777777776445

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=95.10  E-value=0.0066  Score=41.83  Aligned_cols=28  Identities=25%  Similarity=0.515  Sum_probs=22.0

Q ss_pred             cccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          317 KKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .+..||.|+.|++.|.+...+..||.. |
T Consensus        25 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h   52 (82)
T 2kmk_A           25 SDTRPYPCQYCGKRFHQKSDMKKHTFI-H   52 (82)
T ss_dssp             HTCCCEECSSSCCEESSHHHHHHHHHH-H
T ss_pred             CCCCCeeCCcCChhhCCHHHHHHHHHH-h
Confidence            345678888888888888888888874 5

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.05  E-value=0.0058  Score=43.56  Aligned_cols=26  Identities=35%  Similarity=0.627  Sum_probs=18.7

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhh
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      ...||.|+.|++.|.+...|..||..
T Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~   57 (95)
T 2yt9_A           32 GEKPYSCPVCGLRFKRKDRMSYHVRS   57 (95)
T ss_dssp             SSCSEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHH
Confidence            34577777777777777777777764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.01  E-value=0.0093  Score=41.57  Aligned_cols=27  Identities=22%  Similarity=0.564  Sum_probs=24.3

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      .||.|+.|++.|.+...|..||.. |-.
T Consensus        46 ~~~~C~~C~~~f~~~~~L~~H~~~-h~~   72 (86)
T 1x6h_A           46 AAFVCSKCGKTFTRRNTMARHADN-CAG   72 (86)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH-CCC
T ss_pred             cceECCCCCChhCCHHHHHHHHHH-ccC
Confidence            589999999999999999999996 643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=94.93  E-value=0.0076  Score=42.36  Aligned_cols=27  Identities=26%  Similarity=0.723  Sum_probs=20.1

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      ...||.|+.|++.|.+...+..||.. |
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h   57 (90)
T 1a1h_A           31 GQKPFQCRICMRNFSRSDHLTTHIRT-H   57 (90)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHH-H
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHH-c
Confidence            34678888888888888888888774 5

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.92  E-value=0.011  Score=43.86  Aligned_cols=32  Identities=13%  Similarity=0.228  Sum_probs=27.4

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      |-.-|.+..||.|+.|++.|.+...|..||..
T Consensus        10 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A           10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             CCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH
T ss_pred             heeeeCCCCCEECCccCchhcCHHHHHHHHHH
Confidence            44445677899999999999999999999983

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=94.87  E-value=0.0097  Score=42.44  Aligned_cols=23  Identities=30%  Similarity=0.563  Sum_probs=13.5

Q ss_pred             CcccCcccchhhhhhHHHHHHHh
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVA  342 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHms  342 (431)
                      .||.|+.|++.|.+...|..||.
T Consensus        35 ~~~~C~~C~~~f~~~~~l~~H~~   57 (96)
T 2dmd_A           35 KPYKCKTCDYAAADSSSLNKHLR   57 (96)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCEeCCCCCCccCCHHHHHHHHH
Confidence            45556666666655555555555

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=94.84  E-value=0.0099  Score=42.56  Aligned_cols=26  Identities=27%  Similarity=0.763  Sum_probs=24.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|.++..|..||.. |-
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~-H~   27 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRT-HT   27 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHH-HH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHH-cC
Confidence            589999999999999999999995 74

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.82  E-value=0.0074  Score=45.85  Aligned_cols=29  Identities=21%  Similarity=0.335  Sum_probs=22.8

Q ss_pred             ccccCcccCcccchhh-hhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEF-LTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VF-dTSQkFAAHmsS~H  345 (431)
                      +...+||.|+.|++.| .+...|..||.. |
T Consensus        29 ~~~~~~~~C~~C~k~F~~~~~~L~~H~~~-h   58 (96)
T 2ctd_A           29 IVDKGSVSCPTCQAVGRKTIEGLKKHMEN-C   58 (96)
T ss_dssp             HHHTSCEECTTTCSCEESSHHHHHHHHHH-H
T ss_pred             hcCCCCcCCCCCCCCcccCHHHHHHHHHH-H
Confidence            3456788888888888 888888888884 7

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.77  E-value=0.011  Score=46.54  Aligned_cols=28  Identities=32%  Similarity=0.475  Sum_probs=22.7

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      +..||.|+.|++.|.++..|..||...|
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H   42 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEH   42 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhC
Confidence            4568888889888888888888887557

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.70  E-value=0.013  Score=44.52  Aligned_cols=28  Identities=21%  Similarity=0.438  Sum_probs=24.7

Q ss_pred             ccCcccCcccchhhhhhHHHHHH-Hhhhcc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAH-VASAHY  346 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAH-msS~HY  346 (431)
                      ...||.|+.|++.|.+...|..| |. +|-
T Consensus        59 ~~k~~~C~~Cgk~F~~~~~L~~H~~~-~H~   87 (96)
T 2ctd_A           59 KQEMFTCHHCGKQLRSLAGMKYHVMA-NHN   87 (96)
T ss_dssp             CCCCCCCSSSCCCCSSHHHHHHHHHH-HTC
T ss_pred             CCCCeECCCCCCeeCCHHHHHHHhHH-hcC
Confidence            45799999999999999999999 66 583

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.68  E-value=0.0085  Score=44.07  Aligned_cols=28  Identities=36%  Similarity=0.698  Sum_probs=22.8

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      |....||.|+.|++.|.+...|..||..
T Consensus        60 h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A           60 HTGIKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             TCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             cCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence            4455688899999999888888888886

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.68  E-value=0.013  Score=44.70  Aligned_cols=31  Identities=19%  Similarity=0.512  Sum_probs=26.9

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|....||.|+.|++.|.++..|..||.. |-
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~-Ht   49 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNI-HN   49 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHH-HH
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHH-hC
Confidence            34567899999999999999999999985 73

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.67  E-value=0.013  Score=44.13  Aligned_cols=23  Identities=30%  Similarity=0.850  Sum_probs=22.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHh
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVA  342 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHms  342 (431)
                      ++|.||+||..|.-.-.+..||.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            79999999999999999999997

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=94.62  E-value=0.015  Score=40.02  Aligned_cols=30  Identities=33%  Similarity=0.707  Sum_probs=25.7

Q ss_pred             ccccCcccCc--ccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICP--KCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCP--KCN~VFdTSQkFAAHmsS~HY  346 (431)
                      +.+..||.|+  .|++.|.+...+..||.. |-
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~-h~   45 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRI-HT   45 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHH-HH
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHh-hC
Confidence            3456799998  799999999999999985 74

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=94.37  E-value=0.011  Score=47.59  Aligned_cols=29  Identities=24%  Similarity=0.422  Sum_probs=19.0

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      +.+..||+|+.|++.|.+...|..||.. |
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~-H   45 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFNI-H   45 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHHH-H
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHHH-c
Confidence            3445567777777777777777777763 6

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.32  E-value=0.018  Score=39.85  Aligned_cols=30  Identities=20%  Similarity=0.479  Sum_probs=23.3

Q ss_pred             ccccCcccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.  |++.|.+...|..||.. |-
T Consensus        33 H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~   64 (79)
T 2dlk_A           33 HIHQKSFSCPEPACGKSFNFKKHLKEHMKL-HS   64 (79)
T ss_dssp             GGSCCCEECSCTTTCCEESSHHHHHHHHHH-HH
T ss_pred             hCCCCCeECCCCCCcCccCCHHHHHHHHHH-hC
Confidence            44556888888  88888888888888874 63

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.27  E-value=0.012  Score=40.52  Aligned_cols=29  Identities=17%  Similarity=0.423  Sum_probs=21.6

Q ss_pred             ccCcccCc-ccchhhhhhHHHHHHHhhhccc
Q 038616          318 KYGPYICP-KCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       318 KyGPYtCP-KCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      ...||.|+ .|++.|.....+..||.. |..
T Consensus        33 ~~~p~~C~~~C~k~f~~~~~L~~H~~~-hc~   62 (66)
T 2eod_A           33 PRLPVACPNQCGVGTVAREDLPGHLKD-SCN   62 (66)
T ss_dssp             SSSEEECTTCCSCCEEETTTHHHHHHT-TSS
T ss_pred             CCcCccCCcccCcccccHHHHHHHHHh-hcc
Confidence            34578888 888888888888888874 653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.16  E-value=0.023  Score=40.54  Aligned_cols=25  Identities=20%  Similarity=0.308  Sum_probs=21.5

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhcc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      +|.|+.|++.|.+...|..||.. |-
T Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~~-H~   86 (95)
T 2ej4_A           62 WEECPREGKSFKAKYKLVNHIRV-HT   86 (95)
T ss_dssp             CTTCSSTTCCCSSHHHHHHHHHH-HH
T ss_pred             ccCCCCCCcccCCHHHHHHHHHh-cC
Confidence            38999999999999999999985 73

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.14  E-value=0.024  Score=45.11  Aligned_cols=31  Identities=29%  Similarity=0.632  Sum_probs=26.6

Q ss_pred             ccccCcccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      |....||.|+.  |++.|..+..|..||..+|-
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT   54 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK   54 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence            56779999964  99999999999999954575

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=94.03  E-value=0.022  Score=41.89  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=19.5

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      ...||.|+.|++.|.+...|..||.. |
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h   89 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVS-H   89 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHH-H
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHH-c
Confidence            34577777777777777777777764 5

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.96  E-value=0.019  Score=39.85  Aligned_cols=29  Identities=24%  Similarity=0.675  Sum_probs=26.0

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      +.| |+||.|-+.|.+...+-+|..+.|+.
T Consensus         3 ~EG-FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            3 SEG-FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             SEE-EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             Ccc-cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            345 99999999999999999999998874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=93.94  E-value=0.023  Score=43.48  Aligned_cols=28  Identities=18%  Similarity=0.313  Sum_probs=25.0

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .-.+|+|+.|++.|.+...|..||.. |-
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~-H~   52 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRL-LH   52 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHT-TS
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhh-cc
Confidence            45689999999999999999999995 74

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=93.94  E-value=0.018  Score=39.74  Aligned_cols=31  Identities=26%  Similarity=0.523  Sum_probs=23.8

Q ss_pred             ccccCcccCcc--cchhhhhhHHHHHHHhhhccc
Q 038616          316 RKKYGPYICPK--CIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       316 ~~KyGPYtCPK--CN~VFdTSQkFAAHmsS~HYK  347 (431)
                      |.+..||.|+.  |++.|.+...+..||.. |-.
T Consensus        26 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~   58 (85)
T 2j7j_A           26 HTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG   58 (85)
T ss_dssp             HHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHS
T ss_pred             hCCCCCeeCCCCCCcCccCCHHHHHHHHHH-hCC
Confidence            34556888977  99999888888888875 643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=93.87  E-value=0.018  Score=42.26  Aligned_cols=25  Identities=24%  Similarity=0.648  Sum_probs=15.8

Q ss_pred             cCcccCcccchhhhhhHHHHHHHhh
Q 038616          319 YGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       319 yGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      ..||.|+.|++.|.+...|..||..
T Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~   88 (119)
T 2jp9_A           64 VKPFQCKTCQRKFSRSDHLKTHTRT   88 (119)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCccCCccCchhCCHHHHHHHHHH
Confidence            4566666666666666666666653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.77  E-value=0.026  Score=41.42  Aligned_cols=28  Identities=21%  Similarity=0.413  Sum_probs=19.1

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |....||.| .|++.|.+...|..||.. |
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~-h   32 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSM-H   32 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHH-H
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHH-c
Confidence            345567777 777777777777777764 5

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.75  E-value=0.021  Score=42.32  Aligned_cols=25  Identities=16%  Similarity=0.446  Sum_probs=23.4

Q ss_pred             cCcccCcccchhhhhhHHHHHHHhh
Q 038616          319 YGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       319 yGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      ..||.|+.|++.|.+...|..||..
T Consensus        52 ~~~~~C~~C~k~F~~~~~L~~H~~~   76 (98)
T 2gqj_A           52 QDALKCQHCRKQFKSKAGLNYHTMA   76 (98)
T ss_dssp             HHHHSCSSSCCCCSCHHHHHHHHHH
T ss_pred             CCCEECCCCCCccCCHHHHHHHHHH
Confidence            5699999999999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=93.71  E-value=0.059  Score=41.68  Aligned_cols=33  Identities=18%  Similarity=0.177  Sum_probs=26.1

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      +..++..+|.|+.|+++|.+...|..||...|-
T Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   50 (155)
T 2rpc_A           18 WIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV   50 (155)
T ss_dssp             BCCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTS
T ss_pred             eechhhcccccccCCcccCCHHHHHHHHHhhcC
Confidence            344567788999999999999999999886464

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=93.68  E-value=0.016  Score=46.56  Aligned_cols=28  Identities=25%  Similarity=0.625  Sum_probs=16.5

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      |....||.|+.|++.|.+...+..||..
T Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (190)
T 2i13_A           44 HTGEKPYKCPECGKSFSDKKDLTRHQRT   71 (190)
T ss_dssp             C---CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCccCCCcCchhCCHHHHHHHHHh
Confidence            3445566666666666666666666664

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=93.62  E-value=0.016  Score=43.91  Aligned_cols=29  Identities=28%  Similarity=0.656  Sum_probs=24.1

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |....||.|+.|++.|.++..|..||.. |
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H   97 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRY-T   97 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHH-T
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHH-C
Confidence            5556788999999999998889888885 7

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=93.57  E-value=0.031  Score=42.28  Aligned_cols=25  Identities=32%  Similarity=0.626  Sum_probs=23.4

Q ss_pred             cCcccCcccchhhhhhHHHHHHHhh
Q 038616          319 YGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       319 yGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      ..||.|+.|++.|.++..+..||..
T Consensus        98 ~~~~~C~~C~k~f~~~~~l~~H~~~  122 (129)
T 2wbt_A           98 EHTKVCPVCKKEFTSTDSALDHVCK  122 (129)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHH
Confidence            5689999999999999999999986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=93.56  E-value=0.019  Score=46.15  Aligned_cols=27  Identities=22%  Similarity=0.305  Sum_probs=16.4

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      ...||.|+.|++.|.+...|..||.. |
T Consensus        47 ~~k~~~C~~C~k~F~~~~~L~~H~~~-H   73 (133)
T 2lt7_A           47 WEKKYPCRYCEKVFPLAEYRTKHEIH-H   73 (133)
T ss_dssp             CCSCEECSSSSCEESSHHHHHHHHHH-H
T ss_pred             CCCCeeCCccCeecccccchhhhccc-c
Confidence            34566666666666666666666653 5

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=93.52  E-value=0.027  Score=39.41  Aligned_cols=25  Identities=20%  Similarity=0.425  Sum_probs=14.8

Q ss_pred             cCcccCcc--cchhhhhhHHHHHHHhh
Q 038616          319 YGPYICPK--CIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       319 yGPYtCPK--CN~VFdTSQkFAAHmsS  343 (431)
                      -++|+|+.  |++.|.+...|..||..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~   29 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRT   29 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTT
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHh
Confidence            45566665  66666666666666653

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.39  E-value=0.03  Score=38.46  Aligned_cols=25  Identities=20%  Similarity=0.400  Sum_probs=22.5

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHhh
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      .+.||.|+.|++.|. +..+..|+..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~   31 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ   31 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH
Confidence            467999999999999 9999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=93.32  E-value=0.029  Score=38.66  Aligned_cols=25  Identities=28%  Similarity=0.596  Sum_probs=22.9

Q ss_pred             cccC--cccchhhhhhHHHHHHHhhhcc
Q 038616          321 PYIC--PKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       321 PYtC--PKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ||.|  +.|++.|.+...|..||.. |-
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~-h~   27 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS-HT   27 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH-HH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH-hC
Confidence            7999  9999999999999999985 74

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=93.25  E-value=0.028  Score=38.65  Aligned_cols=24  Identities=25%  Similarity=0.559  Sum_probs=11.4

Q ss_pred             cCcccCcc--cchhhhhhHHHHHHHh
Q 038616          319 YGPYICPK--CIQEFLTSQSFAAHVA  342 (431)
Q Consensus       319 yGPYtCPK--CN~VFdTSQkFAAHms  342 (431)
                      -.+|.|+.  |++.|.+...|..||.
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~   40 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTR   40 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHH
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHH
Confidence            34444444  4444444444444444

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=93.03  E-value=0.031  Score=40.99  Aligned_cols=30  Identities=27%  Similarity=0.649  Sum_probs=26.1

Q ss_pred             cccccCcccC--cccchhhhhhHHHHHHHhhhc
Q 038616          315 SRKKYGPYIC--PKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       315 P~~KyGPYtC--PKCN~VFdTSQkFAAHmsS~H  345 (431)
                      -|.+..||.|  +.|++.|.+...|..||.. |
T Consensus        88 ~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-H  119 (119)
T 2jp9_A           88 THTGEKPFSCRWPSCQKKFARSDELVRHHNM-H  119 (119)
T ss_dssp             HHHTCCCEECCSTTCCCEESSHHHHHHHHHT-C
T ss_pred             HhcCCCCeeCCCCCCccccCCHHHHHHHHhc-C
Confidence            3556689999  8999999999999999984 6

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=92.73  E-value=0.035  Score=41.26  Aligned_cols=24  Identities=21%  Similarity=0.474  Sum_probs=15.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHhh
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      .||.|+.|++.|.+...|..||..
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~   56 (124)
T 1ubd_C           33 RVHVCAECGKAFVESSKLKRHQLV   56 (124)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGG
T ss_pred             CCeECCCCCchhCCHHHHHHHHHH
Confidence            456666666666666666666653

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=92.56  E-value=0.036  Score=44.45  Aligned_cols=25  Identities=28%  Similarity=0.664  Sum_probs=14.4

Q ss_pred             ccCcccCcccchhhhhhHHHHHHHh
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAHVA  342 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAHms  342 (431)
                      +..||.|+.|++.|.+...|..||.
T Consensus       130 ~~~~~~C~~C~~~f~~~~~L~~H~~  154 (190)
T 2i13_A          130 GEKPYKCPECGKSFSREDNLHTHQR  154 (190)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHH
Confidence            3445556666666655555555555

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.34  E-value=0.037  Score=43.62  Aligned_cols=28  Identities=18%  Similarity=0.349  Sum_probs=24.3

Q ss_pred             ccCcccCcccchhhhhhHHHHHH-Hhhhcc
Q 038616          318 KYGPYICPKCIQEFLTSQSFAAH-VASAHY  346 (431)
Q Consensus       318 KyGPYtCPKCN~VFdTSQkFAAH-msS~HY  346 (431)
                      ...||.|+.|++.|.++..|..| +. +|-
T Consensus        47 ~ekpf~C~~Cgk~F~~~~~L~~H~~r-~Ht   75 (102)
T 2ghf_A           47 LNSSYVCVECNFLTKRYDALSEHNLK-YHP   75 (102)
T ss_dssp             CSCCEEETTTTEEESSTHHHHTHHHH-TST
T ss_pred             CCCCcCCCCCCcccCCHHHHHHHHHH-hcC
Confidence            45699999999999999999999 55 474

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=92.31  E-value=0.057  Score=41.43  Aligned_cols=29  Identities=24%  Similarity=0.660  Sum_probs=21.8

Q ss_pred             cccccCcccCcc--cchhhhhhHHHHHHHhh
Q 038616          315 SRKKYGPYICPK--CIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       315 P~~KyGPYtCPK--CN~VFdTSQkFAAHmsS  343 (431)
                      -|.+..||.|+.  |++.|.+...|..||..
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  152 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKT  152 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHHh
Confidence            445567788876  88888888888888875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=92.13  E-value=0.073  Score=36.50  Aligned_cols=33  Identities=24%  Similarity=0.579  Sum_probs=27.6

Q ss_pred             eeccccccCcccCc--ccchhhhhhHHHHHHHhhhc
Q 038616          312 HSLSRKKYGPYICP--KCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       312 HSLP~~KyGPYtCP--KCN~VFdTSQkFAAHmsS~H  345 (431)
                      |-.-|....||.|+  .|++.|.+...|..||.. |
T Consensus        38 H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~-H   72 (72)
T 2epa_A           38 HTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT-H   72 (72)
T ss_dssp             HHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT-C
T ss_pred             HHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc-C
Confidence            44556778999995  599999999999999974 5

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.42  E-value=0.084  Score=37.60  Aligned_cols=26  Identities=23%  Similarity=0.327  Sum_probs=23.0

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhcc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .|.|+.|++.|.+...|..||...|-
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~   50 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHV   50 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCcccccccccCCHHHHHHHHHHhcc
Confidence            47899999999999999999985464

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=91.34  E-value=0.071  Score=42.70  Aligned_cols=32  Identities=28%  Similarity=0.530  Sum_probs=23.9

Q ss_pred             cccccCcccCcc--cchhhhhhHHHHHHHhhhccc
Q 038616          315 SRKKYGPYICPK--CIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       315 P~~KyGPYtCPK--CN~VFdTSQkFAAHmsS~HYK  347 (431)
                      -|.+..||.|+.  |++.|.+...|..||.. |-.
T Consensus       128 ~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~-H~~  161 (190)
T 1tf6_A          128 SHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG  161 (190)
T ss_dssp             GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS-SCS
T ss_pred             HhCCCCCccCCCCCCCchhcCHHHHHHHHHH-hCC
Confidence            345567888877  88888888888888874 643

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.32  E-value=0.097  Score=36.07  Aligned_cols=28  Identities=21%  Similarity=0.256  Sum_probs=24.1

Q ss_pred             cCcccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          319 YGPYICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       319 yGPYtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..||.|+-  |++.|.+...|..||..+|-
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~   34 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHI   34 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhC
Confidence            46888887  99999999999999985474

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.61  E-value=0.0088  Score=40.34  Aligned_cols=27  Identities=11%  Similarity=0.256  Sum_probs=24.0

Q ss_pred             cCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          319 YGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       319 yGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      ..||.|+.|++.|.+...|..||.. |-
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~-H~   63 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGN-ES   63 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSC-CC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHh-hc
Confidence            5789999999999999999999985 73

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=90.31  E-value=0.08  Score=36.53  Aligned_cols=26  Identities=15%  Similarity=0.414  Sum_probs=19.9

Q ss_pred             eeccccccCcccCcccchhhhhhHHH
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSF  337 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkF  337 (431)
                      |-.-|....||.|+.|++.|.+...+
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l   30 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEAN   30 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHH
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHh
Confidence            34446677899999999999876544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=90.12  E-value=0.075  Score=45.19  Aligned_cols=28  Identities=25%  Similarity=0.393  Sum_probs=25.5

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhh
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS  343 (431)
                      +.+.+||-|.-|++.|.++..|.+|+.+
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            5567899999999999999999999886

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=90.01  E-value=0.073  Score=40.85  Aligned_cols=30  Identities=27%  Similarity=0.563  Sum_probs=19.2

Q ss_pred             cccCcccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          317 KKYGPYICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       317 ~KyGPYtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      ....||.|+.  |++.|.+...|..||..+|-
T Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~  124 (155)
T 2gli_A           93 TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS  124 (155)
T ss_dssp             TTCCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            3445677776  77777777777777743453

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=89.83  E-value=0.086  Score=40.73  Aligned_cols=26  Identities=23%  Similarity=0.451  Sum_probs=14.2

Q ss_pred             cccCcccCcc--cchhhhhhHHHHHHHh
Q 038616          317 KKYGPYICPK--CIQEFLTSQSFAAHVA  342 (431)
Q Consensus       317 ~KyGPYtCPK--CN~VFdTSQkFAAHms  342 (431)
                      ....||.|+.  |++.|.+...|..||.
T Consensus       116 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A          116 TGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             CSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             CCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            3344555554  5555555555555555

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=89.74  E-value=0.12  Score=38.32  Aligned_cols=28  Identities=21%  Similarity=0.420  Sum_probs=18.4

Q ss_pred             ccccCcccCcc--cchhhhhhHHHHHHHhh
Q 038616          316 RKKYGPYICPK--CIQEFLTSQSFAAHVAS  343 (431)
Q Consensus       316 ~~KyGPYtCPK--CN~VFdTSQkFAAHmsS  343 (431)
                      |....||.|+.  |++.|.+...+..||..
T Consensus        57 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   86 (124)
T 1ubd_C           57 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRI   86 (124)
T ss_dssp             TSCCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             cCCCCCeeCCCCCCcCccCCHHHHHHHHHH
Confidence            33456677763  77777777777777764

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=88.37  E-value=0.22  Score=35.43  Aligned_cols=29  Identities=24%  Similarity=0.437  Sum_probs=20.3

Q ss_pred             ccccCcccCcc--cchhhhhhHHHHHHHhhhc
Q 038616          316 RKKYGPYICPK--CIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       316 ~~KyGPYtCPK--CN~VFdTSQkFAAHmsS~H  345 (431)
                      -++..+|.|+-  |++.|.+...|..||.. |
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h   40 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRT-H   40 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHH-H
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHH-h
Confidence            35556777774  77777777777777774 5

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=87.16  E-value=0.2  Score=40.03  Aligned_cols=22  Identities=23%  Similarity=0.525  Sum_probs=10.3

Q ss_pred             CcccCc--ccchhhhhhHHHHHHH
Q 038616          320 GPYICP--KCIQEFLTSQSFAAHV  341 (431)
Q Consensus       320 GPYtCP--KCN~VFdTSQkFAAHm  341 (431)
                      .||.|+  .|++.|.+...+..||
T Consensus        71 ~~~~C~~~~C~~~f~~~~~l~~H~   94 (190)
T 1tf6_A           71 KNFTCDSDGCDLRFTTKANMKKHF   94 (190)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHH
T ss_pred             CceeCCCCCCCCccCCHHHHHHHH
Confidence            344444  4444444444444444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=83.98  E-value=0.33  Score=32.14  Aligned_cols=19  Identities=11%  Similarity=0.109  Sum_probs=15.5

Q ss_pred             cccccCcccCcccchhhhh
Q 038616          315 SRKKYGPYICPKCIQEFLT  333 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdT  333 (431)
                      -|....||.|+.|++.|.+
T Consensus        35 ~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           35 VHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             TSCCCCCCCSSSSCCSSCC
T ss_pred             hcCCCCCccCCCCCCCCCC
Confidence            4556689999999999964

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.37  E-value=0.18  Score=33.81  Aligned_cols=28  Identities=14%  Similarity=0.218  Sum_probs=21.2

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHH
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAA  339 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAA  339 (431)
                      |-.-|....||.|+.|++.|.++..|..
T Consensus         9 H~~~h~~~~~~~C~~C~k~f~~~~~l~~   36 (73)
T 2ctu_A            9 RQKIHLGDRSQKCSKCGIIFIRRSTLSR   36 (73)
T ss_dssp             CCCCCCCCSEEECSSSCCEEECCCCCCC
T ss_pred             HHHHhCCCCCeeCCcccchhCCHHHhCc
Confidence            3334566789999999999998766544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=80.03  E-value=0.43  Score=32.78  Aligned_cols=19  Identities=21%  Similarity=0.459  Sum_probs=15.7

Q ss_pred             cccCcccCcccchhhhhhH
Q 038616          317 KKYGPYICPKCIQEFLTSQ  335 (431)
Q Consensus       317 ~KyGPYtCPKCN~VFdTSQ  335 (431)
                      ....||.|+.|++.|....
T Consensus        35 ~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A           35 PMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             TTTTEEBCSSSCCBCEECT
T ss_pred             CCCCCEECCCCCCccccCc
Confidence            4568999999999997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	431
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	97.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.19
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.14
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.03
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.99
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.71
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	96.63
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	96.53
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	96.39
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.36
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.33
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.29
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.02
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.84
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	95.6
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	95.33
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.07
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.92
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.63
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	94.47
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.72
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.31
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.04
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.44
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	89.52
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.46
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	85.66
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	85.21
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	81.34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=6.9e-05  Score=50.11  Aligned_cols=34  Identities=21%  Similarity=0.460  Sum_probs=30.1

Q ss_pred             eeccccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       312 HSLP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |..-|....||+|+.|+|.|..+..|..|+.. |-
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~-Ht   36 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HT   36 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCcc-CC
Confidence            55667889999999999999999999999984 73

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=8.3e-05  Score=49.55  Aligned_cols=33  Identities=27%  Similarity=0.534  Sum_probs=29.1

Q ss_pred             ccccccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          314 LSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       314 LP~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      =-|....||.|+.|++.|.++..|..||.. |-.
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~-H~~   36 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GTC
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhc-CcC
Confidence            346788999999999999999999999984 864

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=7e-05  Score=49.98  Aligned_cols=32  Identities=25%  Similarity=0.474  Sum_probs=28.3

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      |.+..||.|+.|++.|..+..+..||...|-+
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            45789999999999999999999999876754

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=8.6e-05  Score=49.20  Aligned_cols=30  Identities=27%  Similarity=0.449  Sum_probs=27.2

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |.+..||.|..|++.|..+..|+.|+.. |-
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~-Ht   31 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRV-HT   31 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHG-GG
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccc-cC
Confidence            5678999999999999999999999994 74

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.00013  Score=48.84  Aligned_cols=31  Identities=26%  Similarity=0.589  Sum_probs=27.4

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      +....||.|+.|++.|..+..+..||.. |-.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~-Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc-cCC
Confidence            3567899999999999999999999984 854

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00011  Score=47.26  Aligned_cols=25  Identities=28%  Similarity=0.818  Sum_probs=23.5

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|+.|++.|..+..+..||.. |
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~-H   26 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRT-H   26 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHH-H
T ss_pred             cCccCCCCcCEecccccccccCCC-c
Confidence            699999999999999999999984 7

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.71  E-value=0.00032  Score=45.06  Aligned_cols=26  Identities=23%  Similarity=0.618  Sum_probs=24.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++.|..+..+..||.+ |-
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~-HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRS-HT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TT
T ss_pred             CcCCCCCCCCCCCCchHcccccCc-cc
Confidence            499999999999999999999995 84

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00038  Score=46.14  Aligned_cols=30  Identities=23%  Similarity=0.441  Sum_probs=27.0

Q ss_pred             ccccCcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          316 RKKYGPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       316 ~~KyGPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      |.+..||.|..|++.|..+..+..||.. |-
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~-H~   32 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKR-YH   32 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHH-TT
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcc-cC
Confidence            4578899999999999999999999995 63

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00047  Score=44.42  Aligned_cols=26  Identities=27%  Similarity=0.812  Sum_probs=24.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+.|++-|..+..|..||.. |-
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~-Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKT-HQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHG-GG
T ss_pred             CCEECCcCCCeecchHHhhhhcCc-cC
Confidence            499999999999999999999995 85

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00053  Score=43.85  Aligned_cols=25  Identities=28%  Similarity=0.620  Sum_probs=23.1

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|..|+|.|..+..|..|... |
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri-H   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI-H   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH-H
T ss_pred             CCccCCCCcCeeccCcccccCccC-C
Confidence            499999999999999999999884 6

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.36  E-value=0.0006  Score=47.00  Aligned_cols=28  Identities=32%  Similarity=0.650  Sum_probs=24.7

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcccc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHYRF  348 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HYK~  348 (431)
                      ..|.|..|+++|.+.|.+.-||.+ |.+.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~-Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNV-HRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHT-TCCS
T ss_pred             CccCCCCCCCccCCcccccchHhh-hcch
Confidence            359999999999999999999996 8553

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.00053  Score=46.73  Aligned_cols=30  Identities=23%  Similarity=0.481  Sum_probs=22.8

Q ss_pred             cccccCcccCcccchhhhhhHHHHHHHhhhc
Q 038616          315 SRKKYGPYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       315 P~~KyGPYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      =|....||.|+.|++.|.++..|..||.. |
T Consensus        24 ~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~-H   53 (53)
T d2csha1          24 MHLGLRPYGCGVCGKKFKMKHHLVGHMKI-H   53 (53)
T ss_dssp             HHSCCCSEECTTTSCEESSSHHHHHHHTT-T
T ss_pred             ccccccCCcCCCcCCEecCHHHHHHHHhc-C
Confidence            34566788888888888888888888863 5

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.00071  Score=45.99  Aligned_cols=29  Identities=28%  Similarity=0.624  Sum_probs=26.1

Q ss_pred             cCcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          319 YGPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       319 yGPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      ..||.|..|++.|.++..+..||..+|-.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~   31 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTS   31 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCC
Confidence            47999999999999999999999867854

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0011  Score=42.99  Aligned_cols=26  Identities=27%  Similarity=0.544  Sum_probs=23.1

Q ss_pred             CcccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+-  |++.|.++..+..||.. |-
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRI-HT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH-HH
T ss_pred             CCccCCCCCCCceECcHHHcCccccc-cC
Confidence            4999976  99999999999999984 73

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0018  Score=42.01  Aligned_cols=26  Identities=23%  Similarity=0.517  Sum_probs=23.5

Q ss_pred             CcccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|+-  |++.|..+..+..||.. |-
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRS-HT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHH-TT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCc-Cc
Confidence            4999988  99999999999999984 74

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.0024  Score=41.42  Aligned_cols=26  Identities=27%  Similarity=0.669  Sum_probs=23.1

Q ss_pred             CcccC--cccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYIC--PKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtC--PKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.|  |-|++.|.++..+..||.. |-
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~-Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRT-HT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCc-cc
Confidence            49999  5799999999999999984 85

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.33  E-value=0.004  Score=40.85  Aligned_cols=27  Identities=30%  Similarity=0.689  Sum_probs=24.3

Q ss_pred             CcccCcc--cchhhhhhHHHHHHHhhhccc
Q 038616          320 GPYICPK--CIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       320 GPYtCPK--CN~VFdTSQkFAAHmsS~HYK  347 (431)
                      .||.|+.  |++.|.++-.+.+||.. |-+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~-Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKS-HQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG-GTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhh-ccC
Confidence            6999987  99999999999999995 854

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.07  E-value=0.0033  Score=40.56  Aligned_cols=25  Identities=36%  Similarity=0.833  Sum_probs=22.4

Q ss_pred             CcccCcc--cchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPK--CIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPK--CN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|+-  |++.|.+|..+..|+.. |
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~-H   27 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI-H   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH-H
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc-c
Confidence            4999976  99999999999999884 7

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0029  Score=40.71  Aligned_cols=25  Identities=36%  Similarity=0.955  Sum_probs=22.8

Q ss_pred             CcccCcc--cchhhhhhHHHHHHHhhhc
Q 038616          320 GPYICPK--CIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       320 GPYtCPK--CN~VFdTSQkFAAHmsS~H  345 (431)
                      .||.|+-  |+|.|.+|..+.+|+.. |
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~-H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILT-H   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHH-H
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhh-c
Confidence            4999988  99999999999999984 6

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.0056  Score=41.45  Aligned_cols=26  Identities=23%  Similarity=0.492  Sum_probs=23.0

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      .||+| .|++.|.+...|..|+. +|..
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~-~Ht~   27 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMS-MHLG   27 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHH-HHSC
T ss_pred             cCCCC-CCCCeECCHHHhHHHhh-cccc
Confidence            59999 69999999999999998 4853

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.47  E-value=0.0034  Score=43.62  Aligned_cols=31  Identities=16%  Similarity=0.398  Sum_probs=27.3

Q ss_pred             cccccCcccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          315 SRKKYGPYICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       315 P~~KyGPYtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      .+.+.+||.|+-  |++.|..+..+-.||.. |-
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~-Ht   44 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HL   44 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHH-HT
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhccc-cc
Confidence            477889999966  99999999999999985 74

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.72  E-value=0.011  Score=38.90  Aligned_cols=27  Identities=37%  Similarity=0.706  Sum_probs=24.1

Q ss_pred             cccCcccchhhhhhHHHHHHHhh-hccc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVAS-AHYR  347 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS-~HYK  347 (431)
                      ||+|..||-.|.|.-.+..||.| +|+|
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKaH~k   28 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKAHSK   28 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcccceeeeeEeeccchhHhhhhhhhcc
Confidence            89999999999999999999986 4543

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.013  Score=39.22  Aligned_cols=26  Identities=38%  Similarity=0.717  Sum_probs=23.7

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhcc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      .||.||.|+.-|...-...-|+.| |-
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrs-hd   27 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRS-HD   27 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHH-HS
T ss_pred             CCcccchHHHHhhccccceEeeec-cc
Confidence            699999999999999999999987 74

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.04  E-value=0.019  Score=36.93  Aligned_cols=24  Identities=25%  Similarity=0.545  Sum_probs=22.2

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |..|+-|++.|+..-++..||.| |
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~-h   24 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRC-H   24 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG-C
T ss_pred             CCccchhhhHhcchhHHHHHhhc-c
Confidence            56899999999999999999997 7

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.44  E-value=0.034  Score=35.63  Aligned_cols=24  Identities=42%  Similarity=0.874  Sum_probs=22.8

Q ss_pred             ccCcccchhhhhhHHHHHHHhhhc
Q 038616          322 YICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       322 YtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      |.||-|=+.|.......||+..+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            899999999999999999999877

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.52  E-value=0.082  Score=34.49  Aligned_cols=27  Identities=30%  Similarity=0.598  Sum_probs=24.4

Q ss_pred             CcccCcccchhhhhhHHHHHHHhhhccc
Q 038616          320 GPYICPKCIQEFLTSQSFAAHVASAHYR  347 (431)
Q Consensus       320 GPYtCPKCN~VFdTSQkFAAHmsS~HYK  347 (431)
                      .||.|.-|++-|..|..--.|+.. |.|
T Consensus         2 kPf~C~~CgrkFArsderkRH~ki-H~k   28 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKI-HLR   28 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGG-GCC
T ss_pred             CCcccchhhhhhhcchhhhhhhhh-ccC
Confidence            699999999999999999999984 864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.46  E-value=0.077  Score=34.98  Aligned_cols=24  Identities=25%  Similarity=0.643  Sum_probs=21.7

Q ss_pred             ccCcc--cchhhhhhHHHHHHHhhhcc
Q 038616          322 YICPK--CIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       322 YtCPK--CN~VFdTSQkFAAHmsS~HY  346 (431)
                      |+|+-  |++.|.++..+..||.. |.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~-Ht   27 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKL-HS   27 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHH-HH
T ss_pred             eECCCCCCCCeeCChhHhccccCe-eC
Confidence            78875  99999999999999995 85

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.66  E-value=0.14  Score=33.63  Aligned_cols=25  Identities=24%  Similarity=0.559  Sum_probs=22.9

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhcc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAHY  346 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~HY  346 (431)
                      -|||.-|..+|...-.+-.||.| |-
T Consensus         4 vftcs~cqe~f~rrmelr~hmvs-ht   28 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVS-HT   28 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH-HS
T ss_pred             eEEeHHHHHHHHHHHhheeeeec-cc
Confidence            58999999999999999999997 73

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.21  E-value=0.17  Score=32.24  Aligned_cols=25  Identities=32%  Similarity=0.878  Sum_probs=22.4

Q ss_pred             cccCcccchhhhhhHHHHHHHhhhc
Q 038616          321 PYICPKCIQEFLTSQSFAAHVASAH  345 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHmsS~H  345 (431)
                      ||.|.-|..-|-....+.+||.-.|
T Consensus         2 pykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhcC
Confidence            8999999999999999999997544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.34  E-value=0.34  Score=31.31  Aligned_cols=22  Identities=32%  Similarity=0.828  Sum_probs=18.5

Q ss_pred             cccCcccchhhhhhHHHHHHHh
Q 038616          321 PYICPKCIQEFLTSQSFAAHVA  342 (431)
Q Consensus       321 PYtCPKCN~VFdTSQkFAAHms  342 (431)
                      ||.|+||+|.+-....+-.|-.
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999888777777755