Citrus Sinensis ID: 038617
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | 2.2.26 [Sep-21-2011] | |||||||
| Q70E96 | 484 | Aldehyde dehydrogenase fa | yes | no | 1.0 | 1.0 | 0.628 | 0.0 | |
| Q70DU8 | 484 | Aldehyde dehydrogenase fa | no | no | 0.979 | 0.979 | 0.505 | 1e-141 | |
| Q8VXQ2 | 479 | Aldehyde dehydrogenase OS | N/A | no | 0.958 | 0.968 | 0.479 | 1e-128 | |
| Q8W033 | 550 | Aldehyde dehydrogenase fa | no | no | 0.966 | 0.850 | 0.484 | 1e-126 | |
| Q5XI42 | 468 | Aldehyde dehydrogenase fa | no | no | 0.944 | 0.976 | 0.441 | 1e-106 | |
| Q80VQ0 | 468 | Aldehyde dehydrogenase fa | yes | no | 0.944 | 0.976 | 0.441 | 1e-105 | |
| P11883 | 453 | Aldehyde dehydrogenase, d | no | no | 0.915 | 0.977 | 0.426 | 1e-102 | |
| P43353 | 468 | Aldehyde dehydrogenase fa | yes | no | 0.958 | 0.991 | 0.428 | 1e-102 | |
| P30838 | 453 | Aldehyde dehydrogenase, d | no | no | 0.907 | 0.969 | 0.428 | 1e-101 | |
| Q1JPA0 | 468 | Aldehyde dehydrogenase fa | no | no | 0.940 | 0.972 | 0.428 | 1e-101 |
| >sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2 | Back alignment and function desciption |
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Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/484 (62%), Positives = 389/484 (80%)
Query: 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
M A +E+ L E+R+TF SG T+S+ WRK Q+ A+ E+++DNEDKI AL QDLGKH
Sbjct: 1 MEAMKETVEESLREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHS 60
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNF 120
E +RDE+G++ ++A A++CLDKW PK +LPLLF+PA G+V+SEP+G VL+ S+WNF
Sbjct: 61 TEAFRDELGVVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNF 120
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQL 180
PI+L+L+PLIGAIAAGNTV+LK SEL+ ++FLA+TIP YLD KAIKV GG DV L
Sbjct: 121 PISLSLDPLIGAIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATIL 180
Query: 181 LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240
LQ +W+KIFFTGSP++G I+M+AAA+HLTPVTLELGGKCP I+D + +IK VKRI
Sbjct: 181 LQHQWDKIFFTGSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIA 240
Query: 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFE 300
GGK+ SCNGQ C+ VDY+L+EK FA TLI+ LK TIK F+GENPK+S +SRI N++H +
Sbjct: 241 GGKWGSCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQ 300
Query: 301 RLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
RL +LL DP V +IV+GG +D++ L++EPTILLDPPLD+EIM EEIFGPILPIIT+ +I
Sbjct: 301 RLSRLLSDPRVQASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDI 360
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
QESI IN++PKPLAIYAFT DE K +I+S TSSGS+ FND ++Q +CD LPFGGVG+S
Sbjct: 361 QESIGIINTKPKPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGES 420
Query: 421 GIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLL 480
GIGRYHG YSF+ FSHEKAIM+ S ++LE RYPPWN+FK+ F+RLA+ YF L+LL+L
Sbjct: 421 GIGRYHGKYSFDCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLML 480
Query: 481 GLKR 484
GLKR
Sbjct: 481 GLKR 484
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2 | Back alignment and function description |
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Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/477 (50%), Positives = 335/477 (70%), Gaps = 3/477 (0%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
E + + ELR++F G+T+ WR QL+ L+ + ++E +I AL DLGK +E+
Sbjct: 10 AEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSV 69
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
E+ L++ S K AL L WMAP+K + L FPAS E+VSEP GVVL+ SAWN+P L+
Sbjct: 70 YEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLS 129
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
++P+IGAI+AGN V+LKPSELA ++ L + + YLD A++V G V LL+QKW
Sbjct: 130 IDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLEQKW 189
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+KIF+TGS ++G ++M+AAAKHLTPV LELGGK P ++D S D+KVTV+RII GK+
Sbjct: 190 DKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVD---SDTDLKVTVRRIIVGKWG 246
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
NGQ CV DYIL K++A LI+++K ++KFYG+NP +SK +SRI+N HF+RL KL
Sbjct: 247 CNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKL 306
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
L + V+D IV+GG D+ENL I PTILLD PLD+ IM+EEIFGP+LPI+TLNN++ES +
Sbjct: 307 LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFD 366
Query: 366 FINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
I SRPKPLA Y FT ++ K++ + S+G ++ ND V LPFGGVG+SG+G Y
Sbjct: 367 VIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAY 426
Query: 426 HGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGL 482
HG +SF+ FSH+KA++ RS F + RYPP++ K++ L+ D + F+L +LLGL
Sbjct: 427 HGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLGL 483
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q8VXQ2|ALDH_CRAPL Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1 | Back alignment and function description |
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Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/467 (47%), Positives = 319/467 (68%), Gaps = 3/467 (0%)
Query: 15 LRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKS 74
LR+T+ SG TKS WR +QL+AL+++ ++ ++ +AL DL K E Y EI ++ +
Sbjct: 13 LRRTYISGKTKSYEWRVSQLKALLKITTHHDKEVVEALRADLKKPEHEAYVHEIFMVSNA 72
Query: 75 AKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIA 134
K AL L +WM P+K + L +P+S E+VSEP GVVL+ +AWN+P LAL+P+IGAIA
Sbjct: 73 CKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWNYPFLLALDPMIGAIA 132
Query: 135 AGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSP 194
AGN V+LKPSE+A ++ LA+ + Y+D AI+V G V + LL Q+W+KIF+TGS
Sbjct: 133 AGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQALLDQRWDKIFYTGSS 192
Query: 195 RVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVG 254
+VG IV+S+AAKHLTPV LELGGKCP ++D + +D+KV +RII K++ +GQ C+
Sbjct: 193 KVGQIVLSSAAKHLTPVVLELGGKCPTVVD---ANIDLKVAARRIISWKWSGNSGQTCIS 249
Query: 255 VDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADA 314
DYI+ ++ A L++++K ++ FYG++P S+ +S IINE FER+ LL D V+D
Sbjct: 250 PDYIITTEENAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERMTGLLDDKKVSDK 309
Query: 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPL 374
IV+GG DK NL I PTILLD D+ +M+EEIFGP+LPIIT+ I+E + I S+PKPL
Sbjct: 310 IVYGGQSDKSNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVGKIEECYKIIASKPKPL 369
Query: 375 AIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
A Y FT D+ ++ VS S+G + ND + L LPFGGVG+SG+G YHG +SF+ F
Sbjct: 370 AAYLFTNDKKRTEEFVSNVSAGGITINDIALHFLEPRLPFGGVGESGMGSYHGKFSFDAF 429
Query: 435 SHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLG 481
SH+K++++RSF E+ RYPP+ +K+ F+ D F LL LG
Sbjct: 430 SHKKSVLKRSFGGEVAARYPPYAPWKLHFMEAILQGDIFGLLKAWLG 476
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Oxidizes nonanal, propionaldehyde and acetaldehyde in vitro, in the following decreasing order of reactivity: nonanal, propionaldehyde, acetaldehyde. Craterostigma plantagineum (taxid: 4153) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2 | Back alignment and function description |
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Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/471 (48%), Positives = 317/471 (67%), Gaps = 3/471 (0%)
Query: 14 ELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK 73
ELR F SG TKS WR +QL+ + ++ + E I +AL+QDL K +E + EI K
Sbjct: 81 ELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDLSKPELEAFLAEISNTKS 140
Query: 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAI 133
S A+ L WMAP+ + + FP+S ++VSEP GVVL+ SAWNFP L++EP+IGAI
Sbjct: 141 SCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVISAWNFPFLLSVEPVIGAI 200
Query: 134 AAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGS 193
AAGN V+LKPSE+A +S LA+ YLD I+V GGV LL QKW+KIFFTG
Sbjct: 201 AAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPETTALLDQKWDKIFFTGG 260
Query: 194 PRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCV 253
RV I+M+AAA++LTPV LELGGKCPA++D S ++++V +RII GK+A +GQ C+
Sbjct: 261 ARVARIIMAAAARNLTPVVLELGGKCPALVD---SDVNLQVAARRIIAGKWACNSGQACI 317
Query: 254 GVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVAD 313
GVDY++ K FA+ LI++LKT ++ F+G+N +SK +SRI+N +HF+RL +LK+ VA+
Sbjct: 318 GVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHFKRLESMLKENGVAN 377
Query: 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKP 373
IVHGG + ++ L I PTILLD P + +M EEIFGP+LPIIT+ I++ + I S+PKP
Sbjct: 378 KIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQKIEDGFQVIRSKPKP 437
Query: 374 LAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFET 433
LA Y FT ++ +KQ V S+G + NDT++ LPFGGVG+SGIG YHG +S+ET
Sbjct: 438 LAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYET 497
Query: 434 FSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGLKR 484
FSH+K ++ RSF + + RYPP+ K L+ + F +L G +
Sbjct: 498 FSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSSNIFAAILAFFGFSK 548
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Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5XI42|AL3B1_RAT Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus GN=Aldh3b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/467 (44%), Positives = 286/467 (61%), Gaps = 10/467 (2%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M EDKL +LR+ F +G T+S +R QL+ L L+DN+ ++ +AL QDL K E+
Sbjct: 1 MDSFEDKLQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESE 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
EI + + AL L WM +K L S + EPFG+VLI WN+P+NL
Sbjct: 61 VSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
L PL+GAIAAGN V+LKPSE++ LAE +P YLD V GG QLL+ +
Sbjct: 121 TLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHR 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
++ IFFTG+ VG IVM+AAAKHLTP+TLELGGK P +D P + R+ ++
Sbjct: 181 FDYIFFTGNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDP---QTVANRVAWFRY 237
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRK 304
+ GQ CV DY+L ++ L+ +L+ I +FYG+NP+ S ++ RIIN+ HFERL+
Sbjct: 238 FNA-GQTCVAPDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQG 296
Query: 305 LLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
LL VA GG D+ +I PT+L+D +M EEIFGPILP++T+ N+ E+I
Sbjct: 297 LLGCGRVA----IGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAI 352
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
EFIN R KPLA+YAF+K KQ+++ TSSG ND + LPFGGVG SG+GR
Sbjct: 353 EFINRREKPLALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGR 412
Query: 425 YHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYD 469
YHG +SF+TFS+++A + RS +E + RYPP+ ++ L +A +
Sbjct: 413 YHGKFSFDTFSNQRACLLRSPGMEKINDLRYPPYTSRNLRVLLVAME 459
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Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q80VQ0|AL3B1_MOUSE Aldehyde dehydrogenase family 3 member B1 OS=Mus musculus GN=Aldh3b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/467 (44%), Positives = 287/467 (61%), Gaps = 10/467 (2%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M EDKL +LR+ F+ G T+S +R QL+ L L+DN+ ++ +AL QDL K E
Sbjct: 1 MDSFEDKLQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAE 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
EI + + AL L WM +K L S + EPFG+VLI WN+PINL
Sbjct: 61 VSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
L PL+GAIAAGN V+LKPSE++ LAE +P YLD V GG QLL+ K
Sbjct: 121 TLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHK 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
++ IFFTG+ VG IVM+AAAKHLTP+TLELGGK P +D P ++ R+ ++
Sbjct: 181 FDYIFFTGNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDP---QIVANRVAWFRY 237
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRK 304
+ GQ CV DYIL ++ L+ +L+ I +FYG+NP+ S ++ RIIN+ HF+RL+
Sbjct: 238 FNA-GQTCVAPDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQG 296
Query: 305 LLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
LL VA GG D+ +I PT+L+D +M EEIFGPILP++T+ ++ E+I
Sbjct: 297 LLGCGRVA----IGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEAI 352
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
EF+N R KPLA+YAF+K KQ+++ TSSG ND + LPFGGVG SG+GR
Sbjct: 353 EFMNRREKPLALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGR 412
Query: 425 YHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYD 469
YHG +SF+TFS+++A + RS +E + RYPP++ ++ L +A +
Sbjct: 413 YHGKFSFDTFSNQRACLLRSPGMEKINDLRYPPYSSRNLRVLLVAME 459
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Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/453 (42%), Positives = 277/453 (61%), Gaps = 10/453 (2%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M I D + R+ F SG T+S+ +R QL AL ++ +N I AL DLGK+ +Y
Sbjct: 1 MSSISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSY 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
+E+ + + + L W + + SEP GVVL+ AWN+P NL
Sbjct: 61 YEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
++P++GA+AAGN V+LKPSE++ A LA IP Y+D V GGV +LL+++
Sbjct: 121 TIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKER 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
++ I +TGS VG IVM+AAAKHLTPVTLELGGK P +D D+ V +RI GKF
Sbjct: 181 FDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVD---KDCDLDVACRRIAWGKF 237
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRK 304
+ +GQ CV DYIL + ++E LK ++K FYGE+ K S+ RIIN+ HF+R++
Sbjct: 238 MN-SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKG 296
Query: 305 LLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
L+ + VA HGG D+ + +I PTIL+D + +M EEIFGP++PI+ + +++E+I
Sbjct: 297 LIDNQKVA----HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAI 352
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
+FIN R KPLA+Y F+ +E K++++ TSSG + ND +V LPFGGVG SG+G
Sbjct: 353 QFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGA 412
Query: 425 YHGHYSFETFSHEKAIMQRSFFLE--LEPRYPP 455
YHG SFETFSH ++ + +S E + RYPP
Sbjct: 413 YHGKKSFETFSHRRSCLVKSLLNEEAHKARYPP 445
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P43353|AL3B1_HUMAN Aldehyde dehydrogenase family 3 member B1 OS=Homo sapiens GN=ALDH3B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/478 (42%), Positives = 287/478 (60%), Gaps = 14/478 (2%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M + D L LR+ F +G T+ +R QL+ L LQ+N+ + AL QDL K E+
Sbjct: 1 MDPLGDTLRRLREAFHAGRTRPAEFRAAQLQGLGRFLQENKQLLHDALAQDLHKSAFESE 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLP--LLFFPASGEVVSEPFGVVLICSAWNFPI 122
E+ + + AL L WM K R+P L S + EPFG+VLI + WN+P+
Sbjct: 61 VSEVAISQGEVTLALRNLRAWM--KDERVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPL 118
Query: 123 NLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQ 182
NL L PL+GA+AAGN V+LKPSE++ LAE +P Y+D V GG QLL+
Sbjct: 119 NLTLVPLVGALAAGNCVVLKPSEISKNVEKILAEVLPQYVDQSCFAVVLGGPQETGQLLE 178
Query: 183 QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242
+++ IFFTGSPRVG IVM+AAAKHLTPVTLELGGK P +D P + R+
Sbjct: 179 HRFDYIFFTGSPRVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDP---QTVANRVAWF 235
Query: 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERL 302
++ + GQ CV DY+L + L+ +L++TI +FYG++P+ S ++ RIIN+ F+RL
Sbjct: 236 RYFNA-GQTCVAPDYVLCSPEMQERLLPALQSTITRFYGDDPQSSPNLGRIINQKQFQRL 294
Query: 303 RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQE 362
R LL VA GG D+ + +I PT+L+D +M EEIFGPILPI+ + ++ E
Sbjct: 295 RALLGCGRVAI----GGQSDESDRYIAPTVLVDVQEMEPVMQEEIFGPILPIVNVQSLDE 350
Query: 363 SIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI 422
+IEFIN R KPLA+YAF+ K++++ TSSG ND + LPFGGVG SG+
Sbjct: 351 AIEFINRREKPLALYAFSNSSQVVKRVLTQTSSGGFCGNDGFMHMTLASLPFGGVGASGM 410
Query: 423 GRYHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYDFDYFNLLLL 478
GRYHG +SF+TFSH +A + RS +E RYPP + +++ L +A + + LL
Sbjct: 411 GRYHGKFSFDTFSHHRACLLRSPGMEKLNALRYPPQSPRRLRMLLVAMEAQGCSCTLL 468
|
Oxidizes medium and long chain saturated and unsaturated aldehydes. Metabolizes also benzaldehyde. Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde. May not metabolize short chain aldehydes. May use both NADP(+) and NAD(+) as cofactors. May have a protective role against the cytotoxicity induced by lipid peroxidation. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P30838|AL3A1_HUMAN Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/457 (42%), Positives = 283/457 (61%), Gaps = 18/457 (3%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M +I + + R F SG T+ + +R QL AL L+Q+ E ++ AL DL K+ Y
Sbjct: 1 MSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAY 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGE----VVSEPFGVVLICSAWNF 120
+E+ + + +Y + L +W A + P+ P + + + SEP GVVL+ WN+
Sbjct: 61 YEEVVYVLEEIEYMIQKLPEWAADE----PVEKTPQTQQDELYIHSEPLGVVLVIGTWNY 116
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQL 180
P NL ++P++GAIAAGN+V+LKPSEL+ AS LA IP YLD V NGGV +L
Sbjct: 117 PFNLTIQPMVGAIAAGNSVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTEL 176
Query: 181 LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240
L+++++ I +TGS VG I+M+AAAKHLTPVTLELGGK P +D D+ V +RI
Sbjct: 177 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVD---KNCDLDVACRRIA 233
Query: 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFE 300
GKF + +GQ CV DYIL + ++E LK ++K+FYGE+ K S+ RII+ HF+
Sbjct: 234 WGKFMN-SGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQ 292
Query: 301 RLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
R+ L++ VA +GG D +I PTIL D + +M EEIFGP+LPI+ + ++
Sbjct: 293 RVMGLIEGQKVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSL 348
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
+E+I+FIN R KPLA+Y F+ ++ K++++ TSSG + ND +V LPFGGVG S
Sbjct: 349 EEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNS 408
Query: 421 GIGRYHGHYSFETFSHEKAIMQRSFFLE--LEPRYPP 455
G+G YHG SFETFSH ++ + R + L+ RYPP
Sbjct: 409 GMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPP 445
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q1JPA0|AL3B1_BOVIN Aldehyde dehydrogenase family 3 member B1 OS=Bos taurus GN=ALDH3B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/469 (42%), Positives = 278/469 (59%), Gaps = 14/469 (2%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M D L LR+ F SG T+ +R QL+ L L++N+ + +AL QDL K E
Sbjct: 1 MDPFADTLQRLREAFVSGRTRPAEFRDAQLKGLSRFLRENKQLLQEALAQDLHKSAFEAE 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
EI + + AL L WM +K L S + EPFG+VLI S WN+P+NL
Sbjct: 61 VSEISISQNEINLALRNLRTWMKDEKVSKNLATQLDSAFIRKEPFGLVLILSPWNYPLNL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
+L PL+GA+AAGN V+LKPSE++ LAE +P YLD V GG +LL+ K
Sbjct: 121 SLGPLVGALAAGNCVVLKPSEISKNTEKVLAEVLPRYLDQSCFAVVLGGPQETGRLLEHK 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
++ IFFTG+P+VG IVM+AAAKHLTPVTLELGGK P +D P + V F
Sbjct: 181 FDYIFFTGNPQVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRV------AF 234
Query: 245 ASC--NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERL 302
C GQ CV DY+L + A L+ +L++ I +FYG++P+ S ++ RII++ HF+RL
Sbjct: 235 FRCFNAGQTCVAPDYVLCSPEMQAQLVPALQSAITRFYGDDPQSSPNLGRIISQKHFQRL 294
Query: 303 RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQE 362
R LL +V GG D+ +L+I PT+L+D +M EEIFGPILPI+ + ++ +
Sbjct: 295 RGLLS----CGRVVIGGQSDECDLYIAPTVLVDVQETDPVMQEEIFGPILPIVNVRSLGQ 350
Query: 363 SIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI 422
+I+FIN R KPLA+YAF+ K++++ TSSG ND + LPFGGVG SG+
Sbjct: 351 AIDFINRREKPLALYAFSNSSQVVKRVLAQTSSGGFCGNDGFMHLTLASLPFGGVGSSGM 410
Query: 423 GRYHGHYSFETFSHEKAIMQRSFFLE--LEPRYPPWNDFKMKFLRLAYD 469
G YHG +SF+TFSH +A + R LE RYPP ++ L +A +
Sbjct: 411 GNYHGKFSFDTFSHHRACLLRRPGLEKIYAIRYPPHTPRNLRVLLMAME 459
|
Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | ||||||
| 356502944 | 485 | PREDICTED: aldehyde dehydrogenase family | 0.989 | 0.987 | 0.716 | 0.0 | |
| 356559335 | 485 | PREDICTED: aldehyde dehydrogenase family | 0.989 | 0.987 | 0.716 | 0.0 | |
| 225431229 | 485 | PREDICTED: aldehyde dehydrogenase family | 0.964 | 0.962 | 0.721 | 0.0 | |
| 297735060 | 493 | unnamed protein product [Vitis vinifera] | 0.964 | 0.947 | 0.721 | 0.0 | |
| 224097106 | 480 | predicted protein [Populus trichocarpa] | 0.966 | 0.975 | 0.694 | 0.0 | |
| 388520793 | 488 | unknown [Medicago truncatula] | 0.981 | 0.973 | 0.684 | 0.0 | |
| 357518173 | 488 | Aldehyde dehydrogenase family 3 member F | 0.981 | 0.973 | 0.684 | 0.0 | |
| 449457494 | 477 | PREDICTED: aldehyde dehydrogenase family | 0.962 | 0.976 | 0.695 | 0.0 | |
| 42567452 | 484 | aldehyde dehydrogenase 3F1 [Arabidopsis | 1.0 | 1.0 | 0.628 | 0.0 | |
| 42406415 | 483 | putative aldehyde dehydrogenase [Arabido | 0.997 | 1.0 | 0.628 | 0.0 |
| >gi|356502944|ref|XP_003520274.1| PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/479 (71%), Positives = 415/479 (86%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
G +E+ + ELRQ F++G TKSV WRKNQL +LI+L+ +NED IFKALH+DLGKHPVE YR
Sbjct: 5 GGVEEPVRELRQYFKTGKTKSVTWRKNQLTSLIDLVHENEDAIFKALHKDLGKHPVEAYR 64
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
DE+G ++KSA ALSC++KWMAPKK +P LFFPA GEV+SEP GVVLI S+WNFPI LA
Sbjct: 65 DEVGGVEKSASKALSCVEKWMAPKKSDIPFLFFPAKGEVLSEPLGVVLIISSWNFPIILA 124
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
L+P+IGAI+AGN V++KPSE A C+SFLA TIP YLD AIKV GG DVCEQLL+QKW
Sbjct: 125 LDPIIGAISAGNVVVIKPSEQAPACSSFLANTIPRYLDSNAIKVIEGGEDVCEQLLRQKW 184
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+KIFFTGSPRV S+VMSAAAK+LTPVTLELGGKCPAILD+L +P + ++ VKRI+GGK+
Sbjct: 185 DKIFFTGSPRVASVVMSAAAKNLTPVTLELGGKCPAILDSLPNPSEFELAVKRIVGGKWG 244
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
C+GQ C+G+DY+LVE+KF++ +I+ LK I++FYGENP +SK ISRIIN+ HFERL L
Sbjct: 245 PCSGQACIGIDYLLVEEKFSSAVIKLLKKFIRRFYGENPVESKVISRIINKQHFERLCNL 304
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
LKDPLVA +IVHGG +D+ENLFIEPTILLDPPLD+EIM EEIFGP+LPIITL+ IQESIE
Sbjct: 305 LKDPLVAASIVHGGSVDEENLFIEPTILLDPPLDSEIMAEEIFGPLLPIITLDKIQESIE 364
Query: 366 FINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
FIN++PKPLAIYAFTKDETFK++I+S TSSGS++FNDT+VQ LCD LPFGGVGQSG+GRY
Sbjct: 365 FINAKPKPLAIYAFTKDETFKRKILSETSSGSVVFNDTMVQFLCDTLPFGGVGQSGLGRY 424
Query: 426 HGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGLKR 484
HG YSF+TFSHEKA+M R FLE+EPRYPPWN FK++F+RLAY +YF L+L +LGLKR
Sbjct: 425 HGKYSFDTFSHEKAVMHRKLFLEIEPRYPPWNKFKLEFIRLAYRLNYFGLVLHMLGLKR 483
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559335|ref|XP_003547955.1| PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/479 (71%), Positives = 411/479 (85%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
GE+E+ + ELRQ F++G TKSV WRKNQL AL++L+ +NED IFKALHQDLGKHPVE YR
Sbjct: 5 GEVEETVRELRQYFKTGKTKSVTWRKNQLTALLDLVHENEDAIFKALHQDLGKHPVEAYR 64
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
DE+G ++KSA ALSC++KWMAPKK +P LFFPA GEV+SEP GVVLI S+WNFPI L
Sbjct: 65 DEVGGVEKSASNALSCVEKWMAPKKSDIPFLFFPAKGEVLSEPLGVVLIFSSWNFPIILT 124
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
L+P+IGAI+AGN V++KPSE + +SFLA TIP YLD AIKV GG DVCEQLL QKW
Sbjct: 125 LDPIIGAISAGNVVVIKPSEQSPASSSFLATTIPRYLDSNAIKVIEGGPDVCEQLLLQKW 184
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+KIFFTGSPRV S+VMSAAAK+LTPVTLELGGKCPAILD+L +PL+ K+ VKRI+GGK+
Sbjct: 185 DKIFFTGSPRVASVVMSAAAKNLTPVTLELGGKCPAILDSLPNPLEFKLAVKRIVGGKWG 244
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
C+GQ C+ +DY+LVEKKF+ LIE LK I++FYGENP +SK ISRI+N+ HFERL L
Sbjct: 245 PCSGQACIAIDYLLVEKKFSYALIELLKKIIRRFYGENPVESKVISRILNKQHFERLCNL 304
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
LKDPLVA +IVHGG +D+ENLFIEPTILLDPPLD++IM+EEIFGP+LPIIT++ IQESIE
Sbjct: 305 LKDPLVAASIVHGGSVDEENLFIEPTILLDPPLDSQIMSEEIFGPLLPIITMDKIQESIE 364
Query: 366 FINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
FIN++PKPLAIYAFTKDETFK+ I+S TSSGS++FNDT+VQ LCD LPFGGVGQSG GRY
Sbjct: 365 FINAKPKPLAIYAFTKDETFKRNILSETSSGSVVFNDTMVQFLCDTLPFGGVGQSGFGRY 424
Query: 426 HGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGLKR 484
HG YSF+TFSHEKA+M R FLE+EPRYPPW+ FK++F+RLAY +YF LLL +LGLKR
Sbjct: 425 HGKYSFDTFSHEKAVMHRKLFLEIEPRYPPWSKFKLEFIRLAYRLNYFGLLLHMLGLKR 483
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431229|ref|XP_002273358.1| PREDICTED: aldehyde dehydrogenase family 3 member F1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/467 (72%), Positives = 407/467 (87%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
G +E+ + ELR+TFRSG T+S AWRK QL+AL++LL+DNE+KIF+AL QDLGKHPVE+YR
Sbjct: 7 GRVEESIGELRRTFRSGETRSAAWRKAQLKALLQLLRDNENKIFEALKQDLGKHPVESYR 66
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
DE+G+++KS KY+LS +D+WMAPKK LPL+FFP G+V+ EP G+VLI S+WNFPI+LA
Sbjct: 67 DELGVVEKSVKYSLSHVDEWMAPKKSSLPLIFFPGKGQVLPEPLGLVLIFSSWNFPISLA 126
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
L+P+IGAI+AGN+V+LKPSE A C+SFLA TIPLYLD KAIKV GG + +QLLQQKW
Sbjct: 127 LDPVIGAISAGNSVVLKPSEQAPACSSFLANTIPLYLDSKAIKVIEGGAAISQQLLQQKW 186
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+KIFFTGSP V IVMSAA KHLTPVT+ELGGKCP I D LSSP D +V VKR++GGK+
Sbjct: 187 DKIFFTGSPSVARIVMSAAVKHLTPVTIELGGKCPTIFDNLSSPSDTEVAVKRVVGGKWG 246
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
CNGQ C+GVDY+LVE+KFA+ LIE LK TIKKFYGENPK+ K IS+I+N++HF+RL L
Sbjct: 247 PCNGQACIGVDYVLVEEKFASHLIEMLKKTIKKFYGENPKELKDISKIVNKHHFQRLHNL 306
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
LK+PLVA +IVHGGL+D+E LFIEPTILLDPPLDAEIMTEEIFGP+LPIITL NI+ESIE
Sbjct: 307 LKEPLVAASIVHGGLIDEEKLFIEPTILLDPPLDAEIMTEEIFGPLLPIITLKNIEESIE 366
Query: 366 FINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
FINSRPKPLA+YAFT DE FK++I+S TSSGS+ FND ++Q +CD LPFGGVGQSG GRY
Sbjct: 367 FINSRPKPLALYAFTNDEAFKRRILSETSSGSVTFNDIIIQFVCDTLPFGGVGQSGFGRY 426
Query: 426 HGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDY 472
HG YSF+TFSHEKA+++RSFFLELEPR+PPWNDFK+KF+RL Y FDY
Sbjct: 427 HGKYSFDTFSHEKAVLRRSFFLELEPRFPPWNDFKLKFIRLVYSFDY 473
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297735060|emb|CBI17422.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/467 (72%), Positives = 407/467 (87%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
G +E+ + ELR+TFRSG T+S AWRK QL+AL++LL+DNE+KIF+AL QDLGKHPVE+YR
Sbjct: 15 GRVEESIGELRRTFRSGETRSAAWRKAQLKALLQLLRDNENKIFEALKQDLGKHPVESYR 74
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
DE+G+++KS KY+LS +D+WMAPKK LPL+FFP G+V+ EP G+VLI S+WNFPI+LA
Sbjct: 75 DELGVVEKSVKYSLSHVDEWMAPKKSSLPLIFFPGKGQVLPEPLGLVLIFSSWNFPISLA 134
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
L+P+IGAI+AGN+V+LKPSE A C+SFLA TIPLYLD KAIKV GG + +QLLQQKW
Sbjct: 135 LDPVIGAISAGNSVVLKPSEQAPACSSFLANTIPLYLDSKAIKVIEGGAAISQQLLQQKW 194
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+KIFFTGSP V IVMSAA KHLTPVT+ELGGKCP I D LSSP D +V VKR++GGK+
Sbjct: 195 DKIFFTGSPSVARIVMSAAVKHLTPVTIELGGKCPTIFDNLSSPSDTEVAVKRVVGGKWG 254
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
CNGQ C+GVDY+LVE+KFA+ LIE LK TIKKFYGENPK+ K IS+I+N++HF+RL L
Sbjct: 255 PCNGQACIGVDYVLVEEKFASHLIEMLKKTIKKFYGENPKELKDISKIVNKHHFQRLHNL 314
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
LK+PLVA +IVHGGL+D+E LFIEPTILLDPPLDAEIMTEEIFGP+LPIITL NI+ESIE
Sbjct: 315 LKEPLVAASIVHGGLIDEEKLFIEPTILLDPPLDAEIMTEEIFGPLLPIITLKNIEESIE 374
Query: 366 FINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
FINSRPKPLA+YAFT DE FK++I+S TSSGS+ FND ++Q +CD LPFGGVGQSG GRY
Sbjct: 375 FINSRPKPLALYAFTNDEAFKRRILSETSSGSVTFNDIIIQFVCDTLPFGGVGQSGFGRY 434
Query: 426 HGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDY 472
HG YSF+TFSHEKA+++RSFFLELEPR+PPWNDFK+KF+RL Y FDY
Sbjct: 435 HGKYSFDTFSHEKAVLRRSFFLELEPRFPPWNDFKLKFIRLVYSFDY 481
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224097106|ref|XP_002310836.1| predicted protein [Populus trichocarpa] gi|222853739|gb|EEE91286.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/468 (69%), Positives = 402/468 (85%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M +E LAELR TF+SG T+SVAWRK+QLRA+IE +QDNE+++FK L QDLGKHPVE Y
Sbjct: 1 MEGLEGTLAELRDTFKSGRTRSVAWRKSQLRAMIEFVQDNEEEMFKVLDQDLGKHPVEAY 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
RDE+G++ KSAK +LSC++KWMAPKK LPL FFPAS EV+ EPFGVVLI +WNFPI+L
Sbjct: 61 RDEVGVVAKSAKLSLSCVEKWMAPKKGNLPLAFFPASAEVMPEPFGVVLIMGSWNFPISL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
L+PLIGAI+AGN V+LKPSEL+ C+SFLAE IP YLD K+IKV GG+DVCEQLLQQ
Sbjct: 121 TLDPLIGAISAGNVVVLKPSELSPACSSFLAEAIPKYLDPKSIKVIEGGIDVCEQLLQQN 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
W+KIFFTGS RVG IVM+AAA+HLTPVTLELGGK PAILD+ S+P ++KV KRI+ K+
Sbjct: 181 WDKIFFTGSQRVGRIVMTAAAQHLTPVTLELGGKSPAILDSSSNPTNMKVIAKRIVAAKW 240
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRK 304
SC+GQ C+ +DY+LVE+KFA+ LI+ L+ TIK+F+GENP++SKS+ +I+N+ +F RL
Sbjct: 241 GSCSGQACIAIDYMLVEEKFASYLIDLLEKTIKQFFGENPRESKSLCKILNKNNFMRLLD 300
Query: 305 LLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
LLKDPL+ ++V+GG +D+E ++IEPTILL+PPLD++IMTEEIFGP+LPIITLNNI +SI
Sbjct: 301 LLKDPLIRASVVYGGSVDEETMYIEPTILLNPPLDSQIMTEEIFGPLLPIITLNNIHDSI 360
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
EFI+SRPKPLAIYAFT+DETFKKQI+S TSSGS+ FNDTL+Q +CD LPFGGVGQSG GR
Sbjct: 361 EFISSRPKPLAIYAFTRDETFKKQILSKTSSGSVTFNDTLLQFVCDSLPFGGVGQSGFGR 420
Query: 425 YHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDY 472
YHG YSF+TFSHEKAI+QR FF ELEPRYPPWN+ K +F++L Y F+Y
Sbjct: 421 YHGKYSFDTFSHEKAILQRRFFPELEPRYPPWNNLKFQFIKLLYAFNY 468
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388520793|gb|AFK48458.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/482 (68%), Positives = 403/482 (83%), Gaps = 7/482 (1%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E+E+ + +LRQ F++G T+SV WRKNQL+AL+ L+ +NED I KAL+QDLGKHPVE YRD
Sbjct: 8 EVEETVRDLRQYFKTGKTRSVTWRKNQLKALLNLIHENEDAISKALYQDLGKHPVEAYRD 67
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
EIG ++KSA+ +L C++KWMAPKK +PL+FFPA GE++ EP GVVLI S+WNFPI +AL
Sbjct: 68 EIGGVEKSAQNSLDCVEKWMAPKKSNIPLVFFPAKGELLPEPLGVVLIFSSWNFPIMMAL 127
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWN 186
+P+IGAI+AGN V++KPSE A C+SFLA +P YLD AIKV GG DVCEQ+ QKW+
Sbjct: 128 DPIIGAISAGNVVVIKPSEQAPACSSFLANILPHYLDPNAIKVVEGGGDVCEQVFLQKWD 187
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFAS 246
KIFFTGSPRV SIVMS+AA++LTPVTLELGGKCPAI D P D K+ VKRI+G K+
Sbjct: 188 KIFFTGSPRVASIVMSSAARNLTPVTLELGGKCPAIFDY---PSDFKMAVKRIVGAKWGV 244
Query: 247 CNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLL 306
C+GQ C+ +DY+LVE+K+++ LIE LK ++KFYG+N +SK++SRIIN++HFERLR LL
Sbjct: 245 CSGQACIAIDYLLVEEKYSSELIELLKKFMRKFYGDNMMESKALSRIINKHHFERLRNLL 304
Query: 307 KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
KDPLVA +IVHGG +D+ NLFIEPTILLDPPLDAEIMTEEIFGP+LP+IT+N IQESIEF
Sbjct: 305 KDPLVAASIVHGGSVDETNLFIEPTILLDPPLDAEIMTEEIFGPLLPVITVNKIQESIEF 364
Query: 367 INSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH 426
INSRPKPLAIYAFTKD TFKK+IVS TSSGS+ FNDTLVQ LCD LPFGGVGQSG GRYH
Sbjct: 365 INSRPKPLAIYAFTKDATFKKKIVSETSSGSVTFNDTLVQFLCDTLPFGGVGQSGFGRYH 424
Query: 427 GHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNL----LLLLLGL 482
G YSF+TFSHEKA++ R LE+EPRYPPW+ FK++FLRLAY +YF L +L +LGL
Sbjct: 425 GKYSFDTFSHEKAVLHRHLCLEIEPRYPPWSKFKLEFLRLAYRLNYFGLVLHMVLHMLGL 484
Query: 483 KR 484
KR
Sbjct: 485 KR 486
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518173|ref|XP_003629375.1| Aldehyde dehydrogenase family 3 member F1 [Medicago truncatula] gi|355523397|gb|AET03851.1| Aldehyde dehydrogenase family 3 member F1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/482 (68%), Positives = 403/482 (83%), Gaps = 7/482 (1%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E+E+ + +LRQ F++G T+SV WRKNQL+AL+ L+ +NED I KAL+QDLGKHPVE YRD
Sbjct: 8 EVEETVRDLRQYFKTGKTRSVTWRKNQLKALLNLIHENEDAISKALYQDLGKHPVEAYRD 67
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
EIG ++KSA+ +L C++KWMAPKK +PL+FFPA GE++ EP GVVLI S+WNFPI +AL
Sbjct: 68 EIGGVEKSAQNSLDCVEKWMAPKKSNIPLVFFPAKGELLPEPLGVVLIFSSWNFPIMMAL 127
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWN 186
+P+IGAI+AGN V++KPSE A C+SFLA +P YLD AIKV GG DVCEQ+L QKW+
Sbjct: 128 DPIIGAISAGNVVVIKPSEQAPACSSFLANILPHYLDPNAIKVIEGGGDVCEQVLLQKWD 187
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFAS 246
KIFFTGSPRV SIVMS+AA++LTPVTLELGGKCPAI D P D K+ VKRI+G K+
Sbjct: 188 KIFFTGSPRVASIVMSSAARNLTPVTLELGGKCPAIFDY---PSDFKMAVKRIVGAKWGV 244
Query: 247 CNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLL 306
C+GQ C+ +DY+LVE+K+++ LIE LK ++KFYG+N +SK++SRIIN++HFERL LL
Sbjct: 245 CSGQACIAIDYLLVEEKYSSELIELLKKFMRKFYGDNMMESKALSRIINKHHFERLCNLL 304
Query: 307 KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
KDPLVA +IVHGG +D+ NLFIEPTILLDPPLDAEIMTEEIFGP+LP+IT+N IQESIEF
Sbjct: 305 KDPLVAASIVHGGSVDETNLFIEPTILLDPPLDAEIMTEEIFGPLLPVITVNKIQESIEF 364
Query: 367 INSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH 426
INSRPKPLAIYAFTKD TFKK+IVS TSSGS+ FNDTLVQ LCD LPFGGVGQSG GRYH
Sbjct: 365 INSRPKPLAIYAFTKDATFKKKIVSETSSGSVTFNDTLVQFLCDTLPFGGVGQSGFGRYH 424
Query: 427 GHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNL----LLLLLGL 482
G YSF+TFSHEKA++ R LE+EPRYPPW+ FK++FLRLAY +YF L +L +LGL
Sbjct: 425 GKYSFDTFSHEKAVLHRHLCLEIEPRYPPWSKFKLEFLRLAYRLNYFGLVLHMVLHMLGL 484
Query: 483 KR 484
KR
Sbjct: 485 KR 486
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457494|ref|XP_004146483.1| PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Cucumis sativus] gi|449522101|ref|XP_004168066.1| PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/466 (69%), Positives = 387/466 (83%)
Query: 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE 67
+E L LR++F++G T+S WR QL +LI+ + D E+ IF+AL+QDLGKHPVE +RDE
Sbjct: 1 MEASLEVLRESFKNGRTRSYEWRIKQLSSLIQFIHDKENTIFEALYQDLGKHPVEIFRDE 60
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALE 127
+G++ KSA ALS L KWMAPKK+ LPLLFFPA GEV+SEPFG+VLI S+WNFP++L+L+
Sbjct: 61 VGIVLKSANNALSSLHKWMAPKKKPLPLLFFPAKGEVLSEPFGLVLIISSWNFPLSLSLD 120
Query: 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNK 187
PLIGAI+AGNT +LKPSE A +SFL T+PLYLD KAIKV GG DV EQLLQ KW+K
Sbjct: 121 PLIGAISAGNTAVLKPSEYAPVFSSFLVATLPLYLDDKAIKVVEGGADVSEQLLQYKWDK 180
Query: 188 IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
IFFTGSPRV IV SAAAKHLTPVTLELGGKCPAI D S ++KV KRI+GGK+ C
Sbjct: 181 IFFTGSPRVARIVSSAAAKHLTPVTLELGGKCPAIFDYSSVHSNMKVAAKRIVGGKWGPC 240
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307
GQ C+G+DY+LVE KFA+ LIESLK +KKFYGEN K+S SI+RI+N+ + ER+ LLK
Sbjct: 241 AGQACIGIDYVLVEDKFASELIESLKRILKKFYGENSKNSTSIARIVNDKNVERISNLLK 300
Query: 308 DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
DP VA +IVHGG +DKE LFIEPTILL+PPL A+IMTEEIFGP+LPIITLN I+ESIEFI
Sbjct: 301 DPKVAASIVHGGSMDKEKLFIEPTILLNPPLYADIMTEEIFGPLLPIITLNKIEESIEFI 360
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
N+RPKPLA+YAFT DET KK+I+ TSSGS+ FNDT+VQ +CD LPFGGVGQSG G YHG
Sbjct: 361 NARPKPLALYAFTGDETLKKRILYETSSGSVTFNDTMVQFVCDSLPFGGVGQSGSGSYHG 420
Query: 428 HYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYF 473
YSF+TFSHEKA+MQRSF +ELEPRYPPWNDFK+KF+RLAY +DYF
Sbjct: 421 KYSFDTFSHEKAVMQRSFLIELEPRYPPWNDFKLKFIRLAYRYDYF 466
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42567452|ref|NP_195348.2| aldehyde dehydrogenase 3F1 [Arabidopsis thaliana] gi|118595575|sp|Q70E96.2|AL3F1_ARATH RecName: Full=Aldehyde dehydrogenase family 3 member F1 gi|133778906|gb|ABO38793.1| At4g36250 [Arabidopsis thaliana] gi|332661239|gb|AEE86639.1| aldehyde dehydrogenase 3F1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/484 (62%), Positives = 389/484 (80%)
Query: 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
M A +E+ L E+R+TF SG T+S+ WRK Q+ A+ E+++DNEDKI AL QDLGKH
Sbjct: 1 MEAMKETVEESLREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHS 60
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNF 120
E +RDE+G++ ++A A++CLDKW PK +LPLLF+PA G+V+SEP+G VL+ S+WNF
Sbjct: 61 TEAFRDELGVVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNF 120
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQL 180
PI+L+L+PLIGAIAAGNTV+LK SEL+ ++FLA+TIP YLD KAIKV GG DV L
Sbjct: 121 PISLSLDPLIGAIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATIL 180
Query: 181 LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240
LQ +W+KIFFTGSP++G I+M+AAA+HLTPVTLELGGKCP I+D + +IK VKRI
Sbjct: 181 LQHQWDKIFFTGSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIA 240
Query: 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFE 300
GGK+ SCNGQ C+ VDY+L+EK FA TLI+ LK TIK F+GENPK+S +SRI N++H +
Sbjct: 241 GGKWGSCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQ 300
Query: 301 RLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
RL +LL DP V +IV+GG +D++ L++EPTILLDPPLD+EIM EEIFGPILPIIT+ +I
Sbjct: 301 RLSRLLSDPRVQASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDI 360
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
QESI IN++PKPLAIYAFT DE K +I+S TSSGS+ FND ++Q +CD LPFGGVG+S
Sbjct: 361 QESIGIINTKPKPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGES 420
Query: 421 GIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLL 480
GIGRYHG YSF+ FSHEKAIM+ S ++LE RYPPWN+FK+ F+RLA+ YF L+LL+L
Sbjct: 421 GIGRYHGKYSFDCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLML 480
Query: 481 GLKR 484
GLKR
Sbjct: 481 GLKR 484
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42406415|emb|CAE48163.1| putative aldehyde dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/484 (62%), Positives = 388/484 (80%), Gaps = 1/484 (0%)
Query: 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
M A +E+ L E+R+TF SG T+S+ WRK Q+ A+ E+++DNEDKI AL QDLGK
Sbjct: 1 MEAMKETVEESLREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKLS 60
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNF 120
E +RDE+G++ ++A A++CLDKW PK +LPLLF+PA G+V+SEP+G VL+ S+WNF
Sbjct: 61 TEAFRDELGVVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNF 120
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQL 180
PI+L+L+PLIGAIAAGNTV+LK SEL+ ++FLA+TIP YLD KAIKV GG DV L
Sbjct: 121 PISLSLDPLIGAIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATIL 180
Query: 181 LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240
LQ +W+KIFFTGSP++G I+M+AAA+HLTPVTLELGGKCP I+D S +IK VKRI
Sbjct: 181 LQHQWDKIFFTGSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHTISK-NIKSVVKRIA 239
Query: 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFE 300
GGK+ SCNGQ C+ VDY+L+EK FA TLI+ LK TIK F+GENPK+S +SRI N++H +
Sbjct: 240 GGKWGSCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQ 299
Query: 301 RLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
RL +LL DP V +IV+GG +D++ L++EPTILLDPPLD+EIM EEIFGPILPIIT+ +I
Sbjct: 300 RLSRLLSDPRVQASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDI 359
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
QESI IN++PKPLAIYAFT DE K +I+S TSSGS+ FND ++Q +CD LPFGGVG+S
Sbjct: 360 QESIGIINTKPKPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGES 419
Query: 421 GIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLL 480
GIGRYHG YSF+ FSHEKAIM+ S ++LE RYPPWN+FK+ F+RLA+ YF L+LL+L
Sbjct: 420 GIGRYHGKYSFDCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLML 479
Query: 481 GLKR 484
GLKR
Sbjct: 480 GLKR 483
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | ||||||
| TAIR|locus:2122224 | 484 | ALDH3F1 "AT4G36250" [Arabidops | 0.993 | 0.993 | 0.620 | 2e-166 | |
| TAIR|locus:2205851 | 484 | ALDH3H1 "AT1G44170" [Arabidops | 0.960 | 0.960 | 0.504 | 1.6e-125 | |
| TAIR|locus:2116134 | 550 | ALDH3I1 "AT4G34240" [Arabidops | 0.944 | 0.830 | 0.491 | 4.2e-118 | |
| DICTYBASE|DDB_G0292270 | 470 | comG "putative NAD-dependent a | 0.902 | 0.929 | 0.446 | 5.8e-98 | |
| UNIPROTKB|E2RPP8 | 599 | ALDH3A2 "Uncharacterized prote | 0.929 | 0.751 | 0.434 | 6.6e-97 | |
| RGD|1359546 | 468 | Aldh3b1 "aldehyde dehydrogenas | 0.944 | 0.976 | 0.441 | 2.9e-96 | |
| UNIPROTKB|Q5XI42 | 468 | Aldh3b1 "Aldehyde dehydrogenas | 0.944 | 0.976 | 0.441 | 2.9e-96 | |
| MGI|MGI:1914939 | 468 | Aldh3b1 "aldehyde dehydrogenas | 0.944 | 0.976 | 0.441 | 5.9e-96 | |
| UNIPROTKB|F1LT79 | 444 | LOC100365083 "Aldehyde dehydro | 0.911 | 0.993 | 0.447 | 7.6e-96 | |
| UNIPROTKB|D4A137 | 507 | Aldh3a2 "Aldehyde dehydrogenas | 0.925 | 0.883 | 0.432 | 2e-95 |
| TAIR|locus:2122224 ALDH3F1 "AT4G36250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1619 (575.0 bits), Expect = 2.0e-166, P = 2.0e-166
Identities = 299/482 (62%), Positives = 382/482 (79%)
Query: 4 AMGE-IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE 62
AM E +E+ L E+R+TF SG T+S+ WRK Q+ A+ E+++DNEDKI AL QDLGKH E
Sbjct: 3 AMKETVEESLREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTE 62
Query: 63 TYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPI 122
+RDE+G++ ++A A++CLDKW PK +LPLLF+PA G+V+SEP+G VL+ S+WNFPI
Sbjct: 63 AFRDELGVVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPI 122
Query: 123 NLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQ 182
+L+L+PLIGAIAAGNTV+LK SEL+ ++FLA+TIP YLD KAIKV GG DV LLQ
Sbjct: 123 SLSLDPLIGAIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQ 182
Query: 183 QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242
+W+KIFFTGSP++G I+M+AAA+HLTPVTLELGGKCP I+D + +IK VKRI GG
Sbjct: 183 HQWDKIFFTGSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGG 242
Query: 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERL 302
K+ SCNGQ C+ VDY+L+EK FA TLI+ LK TIK F+GENPK+S +SRI N++H +RL
Sbjct: 243 KWGSCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRL 302
Query: 303 RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQE 362
+LL DP V +IV+GG +D++ L++EPTILLDPPLD+EIM EEIFGPILPIIT+ +IQE
Sbjct: 303 SRLLSDPRVQASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQE 362
Query: 363 SIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI 422
SI IN++PKPLAIYAFT DE K +I+S TSSGS+ FND ++Q +CD LPFGGVG+SGI
Sbjct: 363 SIGIINTKPKPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGI 422
Query: 423 GRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNXXXXXXXX 482
GRYHG YSF+ FSHEKAIM+ S ++LE RYPPWN+FK+ F+RLA+ YF
Sbjct: 423 GRYHGKYSFDCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLGL 482
Query: 483 KR 484
KR
Sbjct: 483 KR 484
|
|
| TAIR|locus:2205851 ALDH3H1 "AT1G44170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1233 (439.1 bits), Expect = 1.6e-125, P = 1.6e-125
Identities = 236/468 (50%), Positives = 329/468 (70%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E + + ELR++F G+T+ WR QL+ L+ + ++E +I AL DLGK +E+
Sbjct: 11 EASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVY 70
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
E+ L++ S K AL L WMAP+K + L FPAS E+VSEP GVVL+ SAWN+P L++
Sbjct: 71 EVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSI 130
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWN 186
+P+IGAI+AGN V+LKPSELA ++ L + + YLD A++V G V LL+QKW+
Sbjct: 131 DPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLEQKWD 190
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFAS 246
KIF+TGS ++G ++M+AAAKHLTPV LELGGK P ++D S D+KVTV+RII GK+
Sbjct: 191 KIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVD---SDTDLKVTVRRIIVGKWGC 247
Query: 247 CNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLL 306
NGQ CV DYIL K++A LI+++K ++KFYG+NP +SK +SRI+N HF+RL KLL
Sbjct: 248 NNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKLL 307
Query: 307 KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
+ V+D IV+GG D+ENL I PTILLD PLD+ IM+EEIFGP+LPI+TLNN++ES +
Sbjct: 308 DEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDV 367
Query: 367 INSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH 426
I SRPKPLA Y FT ++ K++ + S+G ++ ND V LPFGGVG+SG+G YH
Sbjct: 368 IRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYH 427
Query: 427 GHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFN 474
G +SF+ FSH+KA++ RS F + RYPP++ K++ L+ D + F+
Sbjct: 428 GKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFD 475
|
|
| TAIR|locus:2116134 ALDH3I1 "AT4G34240" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 226/460 (49%), Positives = 313/460 (68%)
Query: 14 ELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK 73
ELR F SG TKS WR +QL+ + ++ + E I +AL+QDL K +E + EI K
Sbjct: 81 ELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDLSKPELEAFLAEISNTKS 140
Query: 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAI 133
S A+ L WMAP+ + + FP+S ++VSEP GVVL+ SAWNFP L++EP+IGAI
Sbjct: 141 SCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVISAWNFPFLLSVEPVIGAI 200
Query: 134 AAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGS 193
AAGN V+LKPSE+A +S LA+ YLD I+V GGV LL QKW+KIFFTG
Sbjct: 201 AAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPETTALLDQKWDKIFFTGG 260
Query: 194 PRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCV 253
RV I+M+AAA++LTPV LELGGKCPA++D S ++++V +RII GK+A +GQ C+
Sbjct: 261 ARVARIIMAAAARNLTPVVLELGGKCPALVD---SDVNLQVAARRIIAGKWACNSGQACI 317
Query: 254 GVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVAD 313
GVDY++ K FA+ LI++LKT ++ F+G+N +SK +SRI+N +HF+RL +LK+ VA+
Sbjct: 318 GVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHFKRLESMLKENGVAN 377
Query: 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKP 373
IVHGG + ++ L I PTILLD P + +M EEIFGP+LPIIT+ I++ + I S+PKP
Sbjct: 378 KIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQKIEDGFQVIRSKPKP 437
Query: 374 LAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFET 433
LA Y FT ++ +KQ V S+G + NDT++ LPFGGVG+SGIG YHG +S+ET
Sbjct: 438 LAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYET 497
Query: 434 FSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYF 473
FSH+K ++ RSF + + RYPP+ K L+ + F
Sbjct: 498 FSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSSNIF 537
|
|
| DICTYBASE|DDB_G0292270 comG "putative NAD-dependent aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 200/448 (44%), Positives = 283/448 (63%)
Query: 15 LRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKS 74
LR+ F S T+ + WR +QL+A+ +++ +N+D I A+ +DLGKH E ++ EI +I+
Sbjct: 18 LRKVFLSQKTRKIDWRYSQLKAIKKMMSENKDNITAAVKKDLGKHEFEIHQTEIVMIQTE 77
Query: 75 AKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIA 134
+S L+ W +K PL F PAS ++ EP GVVLI S WN+P+NLAL PLIGAIA
Sbjct: 78 LDETISHLESWNKTEKVYSPLHFKPASSYILKEPLGVVLIMSPWNYPVNLALIPLIGAIA 137
Query: 135 AGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVT-NGGVDVCEQLLQQKWNKIFFTGS 193
GN +LK S + + L + YLD + + GG +LL+ KW+ IFFTGS
Sbjct: 138 GGNCALLKLSRHSYNISKLLHGLLTKYLDPECFEFDCEGGAPYITELLEYKWDHIFFTGS 197
Query: 194 PRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCV 253
+VG IV AAAK LTPVTLELGGK P I+D DIK+T +R+I GK + GQ C+
Sbjct: 198 VKVGKIVYQAAAKFLTPVTLELGGKNPCIVD---KDTDIKLTARRLIWGKCWNA-GQTCI 253
Query: 254 GVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVAD 313
G+DY++V K LIE K +K+F+GE+ K S S +RII+ ERL++L
Sbjct: 254 GLDYLIVHKSILEPLIEEFKVVLKEFFGEDIKKSTSFARIISSAAAERLQQLFS----MG 309
Query: 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKP 373
+V GG D +I PT+++DP LD+ +M +EIFGP+LPI+T NI E +EFI +RP
Sbjct: 310 KVVIGGEADIAERYIAPTVIVDPDLDSPLMQDEIFGPVLPIVTYENIDECLEFIQNRPHA 369
Query: 374 LAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFET 433
L +Y F++D+ + +++ GT SGSL+ NDTL+ LPFGG+G SGIG YHG +F+
Sbjct: 370 LTLYLFSRDQAIQDKVLDGTQSGSLMINDTLLHFTNPNLPFGGIGDSGIGSYHGKGTFDI 429
Query: 434 FSHEKAIMQRSF--FLELEPRYPPWNDF 459
F H++ ++Q + FL+L RYPP+ F
Sbjct: 430 FVHKRGLVQSTTKKFLDLPLRYPPYTPF 457
|
|
| UNIPROTKB|E2RPP8 ALDH3A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 200/460 (43%), Positives = 283/460 (61%)
Query: 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE 67
+E ++ +R F SG ++ V +R QL AL ++Q+ E I +A+ DL K + Y E
Sbjct: 94 MESRIQRVRAAFASGRSRPVRFRLQQLEALRRMVQEREKDILEAIAGDLCKSELNAYSQE 153
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALE 127
+ + L L +W+A K + LL V EP GVVLI AWN+P L ++
Sbjct: 154 VITVLGELDLVLENLPEWVAAKPAKKNLLTMLDEAYVQPEPLGVVLIIGAWNYPFVLTIQ 213
Query: 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNK 187
PLIGAIAAGN V++KPSEL+ + A LAE +P YLD V NGGV+ +LL+Q+++
Sbjct: 214 PLIGAIAAGNAVIIKPSELSEKTAKILAELLPRYLDQDLYVVINGGVEETTELLKQRFDH 273
Query: 188 IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
I +TG+ VG IVM AAAKHLTPVTLELGGK P +D D+ + +RI GK+ +C
Sbjct: 274 ILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYVD---KDCDLDIACRRITWGKYMNC 330
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307
GQ C+ DY+L E +++ +K T+K+FYGEN K+S RIIN HF+R+ LL+
Sbjct: 331 -GQTCIAPDYVLCEPSLQNQIVQKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLE 389
Query: 308 DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
+A GG D+ +I PTIL D ++ +M EEIFGPILPI+ + N E+I+FI
Sbjct: 390 GQKIA----FGGETDEATRYIAPTILSDVDPESRVMQEEIFGPILPIVPVKNADEAIKFI 445
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
NSR KPLA Y F+ ++ +Q+++GTSSG + ND ++ LPFGGVG SG+G YHG
Sbjct: 446 NSREKPLAFYIFSHNDKLVRQMINGTSSGGVTANDVIMHFTLSSLPFGGVGSSGMGAYHG 505
Query: 428 HYSFETFSHEKAIMQRSFFLE--LEPRYPPWNDFKMKFLR 465
YSF+TFSH++ + +S E + RYPP + K+ + +
Sbjct: 506 KYSFDTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWAK 545
|
|
| RGD|1359546 Aldh3b1 "aldehyde dehydrogenase 3 family, member B1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 206/467 (44%), Positives = 286/467 (61%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M EDKL +LR+ F +G T+S +R QL+ L L+DN+ ++ +AL QDL K E+
Sbjct: 1 MDSFEDKLQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESE 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
EI + + AL L WM +K L S + EPFG+VLI WN+P+NL
Sbjct: 61 VSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
L PL+GAIAAGN V+LKPSE++ LAE +P YLD V GG QLL+ +
Sbjct: 121 TLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHR 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
++ IFFTG+ VG IVM+AAAKHLTP+TLELGGK P +D P + R+ ++
Sbjct: 181 FDYIFFTGNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDP---QTVANRVAWFRY 237
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRK 304
+ GQ CV DY+L ++ L+ +L+ I +FYG+NP+ S ++ RIIN+ HFERL+
Sbjct: 238 FNA-GQTCVAPDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQG 296
Query: 305 LLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
LL VA GG D+ +I PT+L+D +M EEIFGPILP++T+ N+ E+I
Sbjct: 297 LLGCGRVAI----GGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAI 352
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
EFIN R KPLA+YAF+K KQ+++ TSSG ND + LPFGGVG SG+GR
Sbjct: 353 EFINRREKPLALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGR 412
Query: 425 YHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYD 469
YHG +SF+TFS+++A + RS +E + RYPP+ ++ L +A +
Sbjct: 413 YHGKFSFDTFSNQRACLLRSPGMEKINDLRYPPYTSRNLRVLLVAME 459
|
|
| UNIPROTKB|Q5XI42 Aldh3b1 "Aldehyde dehydrogenase family 3 member B1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 206/467 (44%), Positives = 286/467 (61%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M EDKL +LR+ F +G T+S +R QL+ L L+DN+ ++ +AL QDL K E+
Sbjct: 1 MDSFEDKLQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESE 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
EI + + AL L WM +K L S + EPFG+VLI WN+P+NL
Sbjct: 61 VSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
L PL+GAIAAGN V+LKPSE++ LAE +P YLD V GG QLL+ +
Sbjct: 121 TLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHR 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
++ IFFTG+ VG IVM+AAAKHLTP+TLELGGK P +D P + R+ ++
Sbjct: 181 FDYIFFTGNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDP---QTVANRVAWFRY 237
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRK 304
+ GQ CV DY+L ++ L+ +L+ I +FYG+NP+ S ++ RIIN+ HFERL+
Sbjct: 238 FNA-GQTCVAPDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQG 296
Query: 305 LLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
LL VA GG D+ +I PT+L+D +M EEIFGPILP++T+ N+ E+I
Sbjct: 297 LLGCGRVAI----GGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAI 352
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
EFIN R KPLA+YAF+K KQ+++ TSSG ND + LPFGGVG SG+GR
Sbjct: 353 EFINRREKPLALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGR 412
Query: 425 YHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYD 469
YHG +SF+TFS+++A + RS +E + RYPP+ ++ L +A +
Sbjct: 413 YHGKFSFDTFSNQRACLLRSPGMEKINDLRYPPYTSRNLRVLLVAME 459
|
|
| MGI|MGI:1914939 Aldh3b1 "aldehyde dehydrogenase 3 family, member B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
Identities = 206/467 (44%), Positives = 287/467 (61%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
M EDKL +LR+ F+ G T+S +R QL+ L L+DN+ ++ +AL QDL K E
Sbjct: 1 MDSFEDKLQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAE 60
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
EI + + AL L WM +K L S + EPFG+VLI WN+PINL
Sbjct: 61 VSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINL 120
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK 184
L PL+GAIAAGN V+LKPSE++ LAE +P YLD V GG QLL+ K
Sbjct: 121 TLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHK 180
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
++ IFFTG+ VG IVM+AAAKHLTP+TLELGGK P +D P ++ R+ ++
Sbjct: 181 FDYIFFTGNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDP---QIVANRVAWFRY 237
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRK 304
+ GQ CV DYIL ++ L+ +L+ I +FYG+NP+ S ++ RIIN+ HF+RL+
Sbjct: 238 FNA-GQTCVAPDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQG 296
Query: 305 LLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
LL VA GG D+ +I PT+L+D +M EEIFGPILP++T+ ++ E+I
Sbjct: 297 LLGCGRVAI----GGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEAI 352
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
EF+N R KPLA+YAF+K KQ+++ TSSG ND + LPFGGVG SG+GR
Sbjct: 353 EFMNRREKPLALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGR 412
Query: 425 YHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYD 469
YHG +SF+TFS+++A + RS +E + RYPP++ ++ L +A +
Sbjct: 413 YHGKFSFDTFSNQRACLLRSPGMEKINDLRYPPYSSRNLRVLLVAME 459
|
|
| UNIPROTKB|F1LT79 LOC100365083 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 202/451 (44%), Positives = 280/451 (62%)
Query: 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEI 68
E+KL L++ F +G TK +R QL +L + LQDN ++ AL DLGK E+ EI
Sbjct: 2 EEKLQRLKEAFNTGKTKMAKFRAEQLESLGQFLQDNSKQLHDALDGDLGKSAFESDMSEI 61
Query: 69 GLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEP 128
L + AL L WM + L +S + EPFG+VLI + WN+P+NL + P
Sbjct: 62 ILCQNEVDLALKNLQTWMKDESVSTNFLTKFSSAFIRKEPFGLVLIIAPWNYPLNLMIMP 121
Query: 129 LIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKI 188
L+GAIAAGN V+LKPSE++ LAE +P YLD V GG + QLL+ K++ I
Sbjct: 122 LVGAIAAGNCVVLKPSEMSKNTEKVLAELLPQYLDQSCFAVVLGGPEETGQLLKHKFDYI 181
Query: 189 FFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN 248
FFTGSPRVG IVM+AAAKHLTP+TLELGGK P +D P + R+ ++ +
Sbjct: 182 FFTGSPRVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDP---QTVANRVAWFRYFNA- 237
Query: 249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD 308
GQ CV DY+L ++ L+ +L+ I +FYG+NP+ S ++ RIIN+ HFERL+ LL
Sbjct: 238 GQTCVAPDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLGC 297
Query: 309 PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFIN 368
VA GG D+ +I PT+L+D +M EEIFGPILP++T+ N+ E+IEFIN
Sbjct: 298 GRVAI----GGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRNLDEAIEFIN 353
Query: 369 SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGH 428
R KPLA+YA++ + KQ+++ TSSGS ND + LPFGGVG SG+GRYHG
Sbjct: 354 RREKPLALYAYSNNVEVIKQVLARTSSGSFCGNDGFMHMTLSSLPFGGVGSSGMGRYHGK 413
Query: 429 YSFETFSHEKAIMQRSFFLEL--EPRYPPWN 457
+SF+TFS+++A + +E + RYPP++
Sbjct: 414 FSFDTFSNQRACLLSCSGMEKLNDLRYPPYS 444
|
|
| UNIPROTKB|D4A137 Aldh3a2 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 198/458 (43%), Positives = 281/458 (61%)
Query: 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE 67
+E ++ LRQTFRSG ++ + +R QL AL ++Q+ E I A+ DL K + Y E
Sbjct: 1 MERQVQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHE 60
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALE 127
+ I + L L + + + + LL V EP GVVLI AWN+P L L+
Sbjct: 61 VITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQ 120
Query: 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNK 187
PL+GAIAAGN ++KPSEL+ A LAE +P YLD + NGGV+ +LL+Q+++
Sbjct: 121 PLVGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDH 180
Query: 188 IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
I +TG+ VG IVM AAAKHLTPVTLELGGK P +D D+ V +RI GK+ +C
Sbjct: 181 ILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDR---DCDLDVACRRITWGKYMNC 237
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307
GQ C+ DYIL E +++ +K T+K FYGEN K S RIIN HF+R++ LL+
Sbjct: 238 -GQTCIAPDYILCEASLQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLE 296
Query: 308 DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
+A GG D+ +I PTIL D ++++M EEIFGPILPI+++ N++E+I FI
Sbjct: 297 GQKIA----FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFI 352
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
N R KPLA+Y F+ + K+++ TSSG + ND ++ + LPFGGVG SG+G YHG
Sbjct: 353 NDREKPLALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHG 412
Query: 428 HYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKF 463
YSF+TFSH++ + + E + RYPP ++ K+ +
Sbjct: 413 KYSFDTFSHQRPCLLKGLKGESVNKLRYPPNSESKVSW 450
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q80VQ0 | AL3B1_MOUSE | 1, ., 2, ., 1, ., 5 | 0.4411 | 0.9442 | 0.9764 | yes | no |
| P43353 | AL3B1_HUMAN | 1, ., 2, ., 1, ., 5 | 0.4288 | 0.9586 | 0.9914 | yes | no |
| Q9I6C8 | CALB_PSEAE | 1, ., 2, ., 1, ., 6, 8 | 0.3566 | 0.9194 | 0.9348 | yes | no |
| P39616 | ALDH2_BACSU | 1, ., 2, ., 1, ., 3 | 0.4181 | 0.9090 | 0.9649 | yes | no |
| Q04458 | HFD1_YEAST | 1, ., 2, ., 1, ., - | 0.3376 | 0.9049 | 0.8233 | yes | no |
| Q70E96 | AL3F1_ARATH | 1, ., 2, ., 1, ., 3 | 0.6280 | 1.0 | 1.0 | yes | no |
| Q54DG1 | ALDH3_DICDI | 1, ., 2, ., 1, ., 5 | 0.4464 | 0.9028 | 0.9297 | yes | no |
| Q9A777 | CALB_CAUCR | 1, ., 2, ., 1, ., 6, 8 | 0.3362 | 0.8946 | 0.8927 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 484 | |||
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 0.0 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 0.0 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 0.0 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 0.0 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 0.0 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 0.0 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 0.0 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-167 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-166 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-158 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-120 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-97 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 2e-95 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 2e-79 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 3e-78 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-67 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 3e-61 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 7e-58 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 2e-57 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-52 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-52 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 2e-52 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 6e-51 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 8e-51 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 8e-50 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 5e-49 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 9e-49 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 5e-48 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 2e-47 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 3e-47 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-46 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 4e-46 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 7e-46 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-45 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 2e-45 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 3e-45 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 5e-45 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 2e-44 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 2e-44 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 2e-44 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 4e-44 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 7e-44 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 8e-44 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 2e-43 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 4e-43 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 7e-43 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 8e-43 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 4e-42 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 7e-42 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 2e-41 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 8e-41 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-40 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-40 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-40 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 2e-40 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-39 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 4e-39 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 6e-38 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-37 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 2e-37 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 3e-37 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 2e-36 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 7e-36 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-35 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-34 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-33 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 2e-33 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 5e-33 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 5e-33 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 2e-32 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 6e-32 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-31 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 4e-31 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 7e-31 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-30 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 4e-30 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-28 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 4e-28 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 4e-28 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 5e-28 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 6e-28 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 7e-28 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 7e-28 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 9e-28 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-27 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 3e-27 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 7e-26 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 1e-24 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-24 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 7e-24 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-23 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 2e-19 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 3e-19 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-18 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 6e-17 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-16 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-16 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 1e-14 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-13 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 6e-13 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 8e-12 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 2e-11 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-09 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 2e-09 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 7e-07 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-06 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 9e-06 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 3e-05 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 6e-05 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 9e-05 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 5e-04 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 0.002 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 856 bits (2214), Expect = 0.0
Identities = 328/484 (67%), Positives = 397/484 (82%)
Query: 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
A +E +AELR+T+ SG T+S+ WRK+QL+ L+ LL+DNE+ IFKALHQDLGKH
Sbjct: 1 EEAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHR 60
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNF 120
VE YRDE+G++ KSA ALS L KWMAPKK +LPL+ FPA+ EVV EP GVVLI S+WNF
Sbjct: 61 VEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNF 120
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQL 180
PI L+LEPLIGAIAAGN V+LKPSELA ++FLA IP YLD KA+KV GG V EQL
Sbjct: 121 PIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYLDSKAVKVIEGGPAVGEQL 180
Query: 181 LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240
LQ KW+KIFFTGSPRVG I+M+AAAKHLTPV LELGGKCP I+D+LSS D KV V RI+
Sbjct: 181 LQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIV 240
Query: 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFE 300
GGK+ SC GQ C+ +DY+LVE++FA LIE LK+TIKKF+GENP++SKS++RI+N+ HF+
Sbjct: 241 GGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQ 300
Query: 301 RLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
RL LLKDP VA +IVHGG +D++ LFIEPTILL+PPLD++IMTEEIFGP+LPIIT+ I
Sbjct: 301 RLSNLLKDPRVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKI 360
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
++SI FINS+PKPLAIYAFT +E K++I+S TSSGS+ FND ++Q CD LPFGGVG+S
Sbjct: 361 EDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGES 420
Query: 421 GIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLL 480
G GRYHG YSF+TFSHEKA+++RS E E RYPPWNDFK+ FLRL Y FDYF LLLLLL
Sbjct: 421 GFGRYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLL 480
Query: 481 GLKR 484
GLKR
Sbjct: 481 GLKR 484
|
Length = 484 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 706 bits (1824), Expect = 0.0
Identities = 272/430 (63%), Positives = 339/430 (78%), Gaps = 3/430 (0%)
Query: 12 LAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLI 71
+ ELR+TFRSG T+S WRK+QL+ L+ L+ +NED IF AL QDLGK E++RDE+ ++
Sbjct: 5 VRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVL 64
Query: 72 KKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIG 131
S K A+ L KWMAP+K + PL FPA E+VSEP GVVL+ SAWNFP L+LEP+IG
Sbjct: 65 VSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIG 124
Query: 132 AIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFT 191
AIAAGN V+LKPSELA ++ LA+ IP YLD KAIKV GGV LL+QKW+KIFFT
Sbjct: 125 AIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKVIEGGVPETTALLEQKWDKIFFT 184
Query: 192 GSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQV 251
GSPRVG I+M+AAAKHLTPVTLELGGKCP I+D+ D+KV V+RI GGK+ NGQ
Sbjct: 185 GSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTV---DLKVAVRRIAGGKWGCNNGQA 241
Query: 252 CVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV 311
C+ DY+LVE+ FA TLI++LK T++KF+GENPK+SK +SRI+N +HF+RL +LL DP V
Sbjct: 242 CIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSV 301
Query: 312 ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP 371
AD IVHGG D++NL+IEPTILLDPPLD+ IMTEEIFGP+LPIIT+ I+ESIE INSRP
Sbjct: 302 ADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRP 361
Query: 372 KPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF 431
KPLA Y FTK++ K++IV+ TSSG + FNDT+VQ D LPFGGVG+SG G YHG +SF
Sbjct: 362 KPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSF 421
Query: 432 ETFSHEKAIM 441
+ FSH+KA++
Sbjct: 422 DAFSHKKAVL 431
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 634 bits (1638), Expect = 0.0
Identities = 226/431 (52%), Positives = 297/431 (68%), Gaps = 8/431 (1%)
Query: 12 LAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLI 71
+A LR+TF +G T+S+ WRK QL+AL +L +NE++I AL+ DLGK P E Y EI ++
Sbjct: 4 VARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVV 63
Query: 72 KKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIG 131
+AL L KWM P++ +PLL PA V+ EP GVVLI WN+P+ LAL PLIG
Sbjct: 64 LGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIG 123
Query: 132 AIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFT 191
AIAAGNTV+LKPSELA ++ LA+ IP Y D +A+ V GGV+V LL + ++ IFFT
Sbjct: 124 AIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAVVEGGVEVATALLAEPFDHIFFT 183
Query: 192 GSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQV 251
GSP VG IVM AAAKHLTPVTLELGGK P I+D +++V +RI GKF + GQ
Sbjct: 184 GSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVD---KDANLEVAARRIAWGKFLNA-GQT 239
Query: 252 CVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV 311
C+ DY+LV + LIE LK IK+FYGE+PK+S RIINE HF+RL LL D
Sbjct: 240 CIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDD--- 296
Query: 312 ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP 371
+V GG +DKE +I PTIL D D+ +M EEIFGPILPI+T +++ E+IEFINSRP
Sbjct: 297 -GKVVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRP 355
Query: 372 KPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF 431
KPLA+Y F++D+ ++++++ TSSG + ND L+ LPFGGVG SG+G YHG F
Sbjct: 356 KPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGF 415
Query: 432 ETFSHEKAIMQ 442
+TFSH K++++
Sbjct: 416 DTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 577 bits (1491), Expect = 0.0
Identities = 222/457 (48%), Positives = 299/457 (65%), Gaps = 8/457 (1%)
Query: 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEI 68
E + + R F++G TK V +R QL+ L + ++ E++I +AL +DLGK E Y EI
Sbjct: 1 ESLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEI 60
Query: 69 GLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEP 128
G + YA+ L KWM PK+ + PLL FP+ + EP+GVVLI + WN+P LAL P
Sbjct: 61 GFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAP 120
Query: 129 LIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKI 188
LIGAIAAGNT +LKPSEL + +A+ I D + + V GGV+ ++LL QK++ I
Sbjct: 121 LIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAVVEGGVEENQELLDQKFDYI 180
Query: 189 FFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN 248
FFTGS RVG IVM AAAKHLTPVTLELGGK P I+D + ++K+ KRI+ GKF +
Sbjct: 181 FFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDA---NLKLAAKRIVWGKFLNA- 236
Query: 249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD 308
GQ CV DY+LV + I+ LK IKKFYGE+P +S RIINE HF+RL LL +
Sbjct: 237 GQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN 296
Query: 309 PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFIN 368
IV GG D+E L+IEPTIL + D +M EEIFGPILP++T + + E+IE I
Sbjct: 297 ----GKIVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIK 352
Query: 369 SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGH 428
SRPKPLA+Y F++D+ +K+++ S G NDT++ LPFGGVG SG+G YHG
Sbjct: 353 SRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGK 412
Query: 429 YSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLR 465
YSF+TFSH+K+I+++S + +L RYPP+ K K +
Sbjct: 413 YSFDTFSHKKSILKKSTWFDLPLRYPPYKGKKKKLKK 449
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 561 bits (1449), Expect = 0.0
Identities = 215/462 (46%), Positives = 310/462 (67%), Gaps = 8/462 (1%)
Query: 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE 67
I + +L+++F +G T+ + +RK QLR L+ +L++N+ + +A+H+DLG+HP ET E
Sbjct: 9 IPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTE 68
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALE 127
+ L ++ L LD+++ P+K +F P ++ EP GVVL+ AWN+P+NL L
Sbjct: 69 VLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLI 128
Query: 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNK 187
PL GAIAAGNTV+LKPSEL+ + +A+ + YLD ++V GGV+V +LL++ ++
Sbjct: 129 PLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYLDPSYVRVIEGGVEVTTELLKEPFDH 188
Query: 188 IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
IFFTGSPRVG +VM AAA++LTP TLELGGK P I+D ++KV +RI GKF +
Sbjct: 189 IFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVD---KSCNLKVAARRIAWGKFLNA 245
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307
GQ CV DY+LV + IE+LK IK+F+GE+PK S+ SRI+NE+H +RL +L+K
Sbjct: 246 -GQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK 304
Query: 308 DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
D +V+GG +D EN ++ PTI+++P LD+ +M EEIFGPILPI+T NI E +EFI
Sbjct: 305 D--HGGKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFI 362
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
NSRPKPLA+Y F +D+ K+ ++ TSSG+++ ND + L LPFGGVG SG+G YHG
Sbjct: 363 NSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHG 422
Query: 428 HYSFETFSHEKAIMQRSFFLELEP--RYPPWNDFKMKFLRLA 467
Y F+TFSH K ++ +S + RYPP+ FK L
Sbjct: 423 KYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFL 464
|
Length = 493 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 557 bits (1438), Expect = 0.0
Identities = 214/449 (47%), Positives = 290/449 (64%), Gaps = 10/449 (2%)
Query: 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEI 68
+ + R+ F SG T+ + +R QL AL+ +L++NED+I +AL +DL K E EI
Sbjct: 1 AEAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEI 60
Query: 69 GLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEP 128
L+K KYA+S L +WM P+ + L + EP GVVLI AWN+P+ L L P
Sbjct: 61 LLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVP 120
Query: 129 LIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKI 188
L+GAIAAGN V++KPSE++ A LAE IP YLD + V GGV+ +LL+Q+++ I
Sbjct: 121 LVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLKQRFDYI 180
Query: 189 FFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN 248
F+TGS VG IVM AAAKHLTPVTLELGGK P +D DI V +RI GKF +
Sbjct: 181 FYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVD---KSCDIDVAARRIAWGKFINA- 236
Query: 249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD 308
GQ C+ DY+L + +E+LK T+K+FYGE+PK+S RIIN+ HF+RL+KLL
Sbjct: 237 GQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS- 295
Query: 309 PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFIN 368
+ GG D++ +I PT+L D +M EEIFGPILPI+T+NN+ E+IEFIN
Sbjct: 296 ---GGKVAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFIN 352
Query: 369 SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGH 428
SR KPLA+Y F+ ++ +I+S TSSG + NDT++ D LPFGGVG SG+G YHG
Sbjct: 353 SREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGK 412
Query: 429 YSFETFSHEKAIMQRSFFLEL--EPRYPP 455
YSF+TFSH+++ + +S +E RYPP
Sbjct: 413 YSFDTFSHKRSCLVKSLNMEKLNSLRYPP 441
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 516 bits (1331), Expect = 0.0
Identities = 202/436 (46%), Positives = 273/436 (62%), Gaps = 7/436 (1%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
EI+ + LR TFRSG TK + +R QL+ L ++DNE+ I +AL +DLG+ P ET
Sbjct: 6 EIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLT 65
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRR-LPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
E+ +K + L L KW +K + PL F + EP GVVLI WN+P+ LA
Sbjct: 66 EVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLA 125
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
L PL+GAIAAG TV+LKPSEL A+ LAE +P YLD A +V GGV LL+QK+
Sbjct: 126 LSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYLDPDAFQVVQGGVPETTALLEQKF 185
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+KIF+TGS RVG I+ AAAKHLTPVTLELGGK P I+ D+++ KRI+ GKF
Sbjct: 186 DKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVT---KNADLELAAKRILWGKFG 242
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
+ GQ+CV DY+LV+ +E LK + +FY S +RI+N HF RL+ L
Sbjct: 243 NA-GQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSL 301
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
L +V GG +D+ FI PTI+ D D +M+EE+FGP+LPII ++++ E+I+
Sbjct: 302 LDT--TKGKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIK 359
Query: 366 FINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
INSR PLA+Y FT D++ I++ T SG ++ NDTL+ D PFGGVG SG G Y
Sbjct: 360 VINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAY 419
Query: 426 HGHYSFETFSHEKAIM 441
HG Y F+TF+HE+ ++
Sbjct: 420 HGKYGFDTFTHERTVV 435
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 481 bits (1238), Expect = e-167
Identities = 237/471 (50%), Positives = 333/471 (70%), Gaps = 3/471 (0%)
Query: 12 LAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLI 71
+ ELR++F G+T+ WR QL+ L+ + ++E +I AL DLGK +E+ E+ L+
Sbjct: 16 VTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLL 75
Query: 72 KKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIG 131
+ S K AL L WMAP+K + L FPAS E+VSEP GVVL+ SAWN+P L+++P+IG
Sbjct: 76 RNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIG 135
Query: 132 AIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFT 191
AI+AGN V+LKPSELA ++ LA+ + YLD A++V G V LL+QKW+KIF+T
Sbjct: 136 AISAGNAVVLKPSELAPASSALLAKLLEQYLDSSAVRVVEGAVTETTALLEQKWDKIFYT 195
Query: 192 GSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQV 251
GS ++G ++M+AAAKHLTPV LELGGK P ++D S D+KVTV+RII GK+ NGQ
Sbjct: 196 GSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVD---SDTDLKVTVRRIIAGKWGCNNGQA 252
Query: 252 CVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV 311
C+ DYIL K++A +I+++K ++ FYG+NP +SK +SRI+N HF+RL KLL + V
Sbjct: 253 CISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEV 312
Query: 312 ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP 371
+D IV+GG D+ENL I PTILLD PLD+ IM+EEIFGP+LPI+TLNN++ES + I SRP
Sbjct: 313 SDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRP 372
Query: 372 KPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF 431
KPLA Y FT ++ K++ + S+G ++ ND V LPFGGVG+SG+G YHG +SF
Sbjct: 373 KPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSF 432
Query: 432 ETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGL 482
+ FSH+KA++ RS F + RYPP++ K++ L+ D + F++ +LLGL
Sbjct: 433 DAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGL 483
|
Length = 484 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 475 bits (1224), Expect = e-166
Identities = 185/420 (44%), Positives = 257/420 (61%), Gaps = 7/420 (1%)
Query: 26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW 85
+ A R +L+ L + + ++I AL D K E EI + +A+ L KW
Sbjct: 18 TAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKW 77
Query: 86 MAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE 145
M PK+ R PLL F ++ EP GV LI S WN+P NLA PL+ AIAAGNT +LKPSE
Sbjct: 78 MKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSE 137
Query: 146 LAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAA 205
L ++ +A+ I D + V G +V + LL+ ++ IFFTGSP VG IVM+AAA
Sbjct: 138 LTPHTSAVIAKIIREAFDEDEVAVFEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAA 197
Query: 206 KHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFA 265
KHL VTLELGGK P I+D D+K K+I GKF + GQ C+ DY+ V +
Sbjct: 198 KHLASVTLELGGKSPTIVD---ETADLKKAAKKIAWGKFLNA-GQTCIAPDYVFVHESVK 253
Query: 266 ATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLD 322
+E LK I+KFYG++ K S ++RI+N+ HF+RL+ LL D + A + GG D
Sbjct: 254 DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD 313
Query: 323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382
+I PT+L + D +IM EEIFGP+LPIIT ++ E IE+IN++PKPLA+Y F+KD
Sbjct: 314 AAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKD 373
Query: 383 ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
+ ++++ TSSG ++ ND ++ L LPFGGV SGIG YHG Y F+ FSHE+A+++
Sbjct: 374 KANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVLR 433
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 455 bits (1174), Expect = e-158
Identities = 178/439 (40%), Positives = 247/439 (56%), Gaps = 10/439 (2%)
Query: 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV-ETYRDE 67
+ L + F + S+ R+++L L LL DN+D + +A+ D G ET E
Sbjct: 1 QALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAE 60
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALE 127
I K+A L KWM P +R + LLF PA EV +P GVV I WN+P+ LAL
Sbjct: 61 ILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALG 120
Query: 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNK 187
PLI A+AAGN VM+KPSE ++ LAE + Y D + V GG DV ++
Sbjct: 121 PLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVAVVTGGADVAAAFSSLPFDH 180
Query: 188 IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
+ FTGS VG VM AAA++LTPVTLELGGK PAI ++ D+ +RI GK +
Sbjct: 181 LLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAI---IAPDADLAKAAERIAFGKLLNA 237
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307
GQ CV DY+LV + + + K + K Y D+ + IINE H+ RL+ LL+
Sbjct: 238 -GQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYP-TLADNPDYTSIINERHYARLQGLLE 295
Query: 308 DPLVADAIVH----GGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQES 363
D A V G + PT++L+ D +M EEIFGPILPI+T +++ E+
Sbjct: 296 DARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEA 355
Query: 364 IEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG 423
I++IN+RP+PLA+Y F +D+ + +++ T SG + NDTL+ D LPFGGVG SG+G
Sbjct: 356 IDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMG 415
Query: 424 RYHGHYSFETFSHEKAIMQ 442
YHG F TFSH K + +
Sbjct: 416 AYHGKEGFLTFSHAKPVFK 434
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-120
Identities = 142/440 (32%), Positives = 204/440 (46%), Gaps = 16/440 (3%)
Query: 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEI 68
+ +A R F++ A R LR L +LL++ +++ + GK P+E E+
Sbjct: 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGK-PIEEALGEV 59
Query: 69 GLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEP 128
+ +Y + +P V EP GVV + WNFP+ LA
Sbjct: 60 ARAADTFRYYAGLARRLHGE---VIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWK 116
Query: 129 LIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNGGVDVCEQLL--QQKW 185
L A+AAGNTV+LKPSEL A LAE + L + V G D L +
Sbjct: 117 LAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRV 176
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+KI FTGS VG +M AAA++L VTLELGGK P I+ D+ VK + G F
Sbjct: 177 DKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIV--FDDA-DLDAAVKGAVFGAF- 232
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRK 304
GQVC +LV + +E L +K NP D + + +I+ +R+
Sbjct: 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLA 292
Query: 305 LLKDPLVADA-IVHGGLLDKEN--LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ 361
++D A ++ GG + F+ PT+L D D I EEIFGP+LP+I + +
Sbjct: 293 YIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEE 352
Query: 362 ESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
E+IE N LA FT+D ++ +G++ ND V PFGGV QSG
Sbjct: 353 EAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSV-GAEPSAPFGGVKQSG 411
Query: 422 IGRYHGHYSFETFSHEKAIM 441
IGR G Y E ++ K +
Sbjct: 412 IGREGGPYGLEEYTEPKTVT 431
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 301 bits (774), Expect = 1e-97
Identities = 139/445 (31%), Positives = 201/445 (45%), Gaps = 21/445 (4%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
+++ +A R F + S R LR + +LL+ +++ + + GK E R
Sbjct: 37 DVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEA-RG 95
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
EI +Y + + V EP GVV + WNFP+ LA
Sbjct: 96 EIARAADFIRYYAEEARRLEGETIPTDK----GSKALVRREPLGVVGAITPWNFPLALAA 151
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK-----VTNGGVDVCEQLL 181
L A+AAGNTV+LKPSE A LAE L + VT GG +V + L+
Sbjct: 152 WKLAPALAAGNTVVLKPSEQTPLSALALAE---LAAEAGLPAGVLNVVTGGGAEVGDALV 208
Query: 182 QQKW-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI-LDTLSSPLDIKVTVKRI 239
+ I FTGS VG + +AAA +L PVTLELGGK PAI L+ D+ V
Sbjct: 209 AHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDA----DLDAAVDAA 264
Query: 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYH 298
+ G F + GQ C ++V + +E L +P D + + +I+E
Sbjct: 265 VFGAFFN-AGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQ 323
Query: 299 FERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN 358
+R+ ++D + A + G F+EPTIL D I EEIFGP+LP+I
Sbjct: 324 LDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFK 383
Query: 359 NIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVG 418
+ +E+IE N LA FT+D ++ +G + ND LPFGGV
Sbjct: 384 DEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVK 443
Query: 419 QSGIGRYHGHYSFETFSHEKAIMQR 443
QSG+GR G Y E F+ K + +
Sbjct: 444 QSGLGREGGKYGLEEFTEVKTVTIK 468
|
Length = 472 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 292 bits (750), Expect = 2e-95
Identities = 130/429 (30%), Positives = 184/429 (42%), Gaps = 69/429 (16%)
Query: 16 RQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSA 75
R F++ A R LR + +LL++ +++ + GK P+E E+ +
Sbjct: 4 RAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGK-PIEEALGEVARAIDTF 62
Query: 76 KYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
+YA DK P+ V EP GVV + + WNFP+ LA L A+AA
Sbjct: 63 RYAAGLADKLGGPELPSPDP---GGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAA 119
Query: 136 GNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNGGVDVCEQLL--QQKWNKIFFTG 192
GNTV+LKPSEL A LAE + L + V GG D L + +KI FTG
Sbjct: 120 GNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTG 179
Query: 193 SPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVC 252
S VG +M AAA++L PVTLELGGK P I+D D+ V+ + G F GQ+C
Sbjct: 180 STAVGKAIMKAAAENLKPVTLELGGKSPVIVD---EDADLDAAVEGAVFGAF-FNAGQIC 235
Query: 253 VGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVA 312
+LV ES+ E+L
Sbjct: 236 TAASRLLVH--------ESIYDEFV----------------------EKLV--------- 256
Query: 313 DAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPK 372
T+L+D D I EEIFGP+LP+I + +E+I N
Sbjct: 257 ------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEY 298
Query: 373 PLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFE 432
L FT+D ++ +G++ ND+ + PFGGV SGIGR G Y E
Sbjct: 299 GLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GPEAPFGGVKNSGIGREGGPYGLE 357
Query: 433 TFSHEKAIM 441
++ K ++
Sbjct: 358 EYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 2e-79
Identities = 131/441 (29%), Positives = 200/441 (45%), Gaps = 15/441 (3%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E+ +A R R+ V R +L L D+ D++ + LH + GK P
Sbjct: 19 EVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGK-PRADAGL 77
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
E+ L ++ +A + +AP+K LL V P+GVV + S WN+P+ +
Sbjct: 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPM 137
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIP-LYLDCKAIKVTNGGVDVCEQLLQQKW 185
+I A+AAGN V+LKPSE+ LAE ++V G L+
Sbjct: 138 GDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGV 197
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+K+ FTGS G VM+AAA+ L PV LELGGK P I+ + D++ + G
Sbjct: 198 DKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA---DLERAAAAAVWGAMV 254
Query: 246 SCNGQVCVGVDYILVEK----KFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301
+ GQ C+ V+ + V + +F A L+ + G + I + +
Sbjct: 255 NA-GQTCISVERVYVHESVYDEFVARLVAKARALRP---GADDIGDADIGPMTTARQLDI 310
Query: 302 LRKLLKDPLVADAIVHGGLLDKEN--LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN 359
+R+ + D + A G F EPT+L D P D ++M EE FGP+LP++ + +
Sbjct: 311 VRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVAD 370
Query: 360 IQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQ 419
E+I N L+ F++D + I +G++ ND L+ LPFGGV
Sbjct: 371 EDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKD 430
Query: 420 SGIGRYHGHYSFETFSHEKAI 440
SG GR HG F KAI
Sbjct: 431 SGGGRRHGAEGLREFCRPKAI 451
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 250 bits (642), Expect = 3e-78
Identities = 141/440 (32%), Positives = 205/440 (46%), Gaps = 34/440 (7%)
Query: 16 RQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSA 75
R F++ + R L +LL++ D++ + + GK E R E+
Sbjct: 39 RAAFKAWAKTPPSERAAILLKAADLLEERRDELAELETLETGKPLAEA-RGEVP------ 91
Query: 76 KYALSCLDKWMAPKKRRLPLLFFPASGEVVS----EPFGVVLICSAWNFPINLALEPLIG 131
A+ L ++ A R+L P+ V++ EP GVV + WNFP+ LA +
Sbjct: 92 -RAIDTL-RYYAGLARKLEGETLPSDPGVLAYTRREPLGVVGAITPWNFPLLLAAWKIAP 149
Query: 132 AIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK-----VTNGGVDVCEQLLQ-QKW 185
A+AAGNTV+LKPSEL A LAE L+ + VT G +V + L++
Sbjct: 150 ALAAGNTVVLKPSELTPLTALLLAE---LFEEAGLPPGVLNVVTGSGSEVGDALVEHPDV 206
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGK 243
+K+ FTGS VG + AAAK+L VTLELGGK P I+ D D+ V+ + G
Sbjct: 207 DKVSFTGSTEVGRRIAKAAAKNLKRVTLELGGKNPLIVFDDA-----DLDAAVEGAVFGA 261
Query: 244 FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERL 302
F GQVC +LV + +E L K +P D + I +I++ ER+
Sbjct: 262 F-GNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERV 320
Query: 303 RKLLKDPLVADA-IVHGGLLDKEN-LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
++D A ++ GG E F+EPT+L D D I EEIFGP+L +I +
Sbjct: 321 LSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDE 380
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
E+IE N LA FT D ++ +G + ND + LPFGG QS
Sbjct: 381 DEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVWINDYTTGDP-EALPFGGFKQS 439
Query: 421 GIGRYHGHYSFETFSHEKAI 440
G GR G E ++ K +
Sbjct: 440 GFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 2e-67
Identities = 137/450 (30%), Positives = 221/450 (49%), Gaps = 21/450 (4%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
++++ +A R R S A R+ LR+L++ + +N+++I + +D GK V+
Sbjct: 19 DVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
EI + + ++ L +K + P+ R LL F V EP GVV +WN+P + L
Sbjct: 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLL 138
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL-DCKA----IKVTNGGVDVCEQLL 181
P+I A+ AGN +++K SE + F I L C +++ + E L
Sbjct: 139 GPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALT 198
Query: 182 QQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKR 238
+ I F GSP VG VM+AAA+ LTPV LELGGK PAI+ D D+
Sbjct: 199 SHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLDDA-----DLDQIASI 253
Query: 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK-SISRIINEY 297
I+ G F S GQ C+G++ ++V +K L+E L ++ P D + +I+
Sbjct: 254 IMRGTFQSS-GQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPA 312
Query: 298 HFERLRKLLKDPLVADA-IVHGG-----LLDKENLFIEPTILLDPPLDAEIMTEEIFGPI 351
F+RL +L+ D + A ++ GG + + PT+L+D D +I EE+FGP+
Sbjct: 313 RFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPV 372
Query: 352 LPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDV 411
+ ++ ++ +E++E NS L F KD ++I S +G + ND V
Sbjct: 373 MVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQ 432
Query: 412 LPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
LPFGGV SG GR+ G + K++
Sbjct: 433 LPFGGVKGSGFGRFAGEEGLRGLCNPKSVT 462
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 206 bits (527), Expect = 3e-61
Identities = 139/447 (31%), Positives = 195/447 (43%), Gaps = 65/447 (14%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
WRK LR +L+++ + + + L + GK P+ R E+ YA S
Sbjct: 34 TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGK-PLAEARGEV-------DYAAS 85
Query: 81 CLDKWMAPKKRR-----LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
L+ W A + RR +P V+ +P GVV + WNFP + + A+AA
Sbjct: 86 FLE-WFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAA 144
Query: 136 GNTVMLKPSELAVECASFLAET-----IP---LYLDCKAIKVTNGGVDVCEQLLQQKWN- 186
G TV+LKP+E A LAE +P L + VT ++ E L +
Sbjct: 145 GCTVVLKPAEETPLSALALAELAEEAGLPAGVLNV------VTGSPAEIGEALCA---SP 195
Query: 187 ---KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIG 241
KI FTGS VG ++M+ AA + V+LELGG P I+ D D+ V I
Sbjct: 196 RVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDA-----DLDKAVDGAIA 250
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFE 300
KF GQ CV + I V + +E L +KK N D + + +INE E
Sbjct: 251 SKFR-NAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVE 309
Query: 301 RLRKLLKDPLVADAIVHGG-------LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP 353
++ L V DA+ G L F EPT+L D D IM EE FGP+ P
Sbjct: 310 KVEAL-----VEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAP 364
Query: 354 IITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLP 413
II + E I N P LA Y FT+D ++ +G + N L+ P
Sbjct: 365 IIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS--DAEAP 422
Query: 414 FGGVGQSGIGRYHGHYSFETFSHEKAI 440
FGGV +SG+GR G E + K +
Sbjct: 423 FGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 7e-58
Identities = 131/460 (28%), Positives = 209/460 (45%), Gaps = 52/460 (11%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E++ +A ++ F S A R L + +L++ D++ D GK P+ R
Sbjct: 20 EVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGK-PITLART 78
Query: 67 EIGLIKKSAK----YALSCLDKWMAPKKRRLPLLFFPASGEVVS----EPFGVVLICSAW 118
I ++A +A L +L +P G ++ +P GV + + W
Sbjct: 79 --RDIPRAAANFRFFADYIL---------QLDGESYPQDGGALNYVLRQPVGVAGLITPW 127
Query: 119 NFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA-------IKVTN 171
N P+ L + A+A GNTV+LKPSE A LAE + V +
Sbjct: 128 NLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAEL------ANEAGLPPGVVNVVH 181
Query: 172 G-GVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLS 227
G G + L+ I FTG G +M AAA +L PV+LELGGK P I+ D
Sbjct: 182 GFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA-- 239
Query: 228 SPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDS 287
D+ V + F++ NG+VC+ ILV++ +E K +P D
Sbjct: 240 ---DLDRAVDAAVRSSFSN-NGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDP 295
Query: 288 KS-ISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKEN-----LFIEPTILLDPPLDA 340
+ + +I++ H E++ ++ A I+ GG + F+EPT++ D+
Sbjct: 296 DTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDS 355
Query: 341 EIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400
+ EEIFGP++ +I ++ +E+IE N P LA Y +T+D ++ +G++
Sbjct: 356 RVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWV 415
Query: 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
N LV+ L PFGGV SGIGR G YS E ++ K +
Sbjct: 416 NCWLVRDL--RTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 2e-57
Identities = 113/351 (32%), Positives = 170/351 (48%), Gaps = 28/351 (7%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI----- 158
VV EP GVVL + WN P+ L + +AAGNTV+LK SEL+ +
Sbjct: 94 VVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGL 153
Query: 159 -PLYLDCKAIKVTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELG 216
L+ + +V E L+ K+ FTGS RVG I+ AAKHL PV LELG
Sbjct: 154 PKGVLNVVTHSPEDAP-EVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELG 212
Query: 217 GKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKT 274
GK PAI+ D D+ + G F + +GQ+C+ + I+V + A +E LK
Sbjct: 213 GKAPAIVLEDA-----DLDAAANAALFGAFLN-SGQICMSTERIIVHESIADEFVEKLKA 266
Query: 275 TIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKE--NLFIEPT 331
+K + +++ +R+++L+ D L A +V GGL D+ + PT
Sbjct: 267 AAEKL----FAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPT 322
Query: 332 ILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391
IL + D +I +EE FGP++ II + + +E++ N L+ FT+D +
Sbjct: 323 ILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAK 382
Query: 392 GTSSGSLIFNDTLVQQLCD--VLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
SG++ N V D LP GGV SG GR++G + + F+ K I
Sbjct: 383 RIESGAVHINGMTVH---DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 1e-52
Identities = 120/460 (26%), Positives = 192/460 (41%), Gaps = 58/460 (12%)
Query: 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE 67
IE L F + S A R LR L +LL++ +D++ + + ++GK P+ R E
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGK-PIAEARAE 59
Query: 68 IGLIKKSAK----YALSCLD---KWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNF 120
+ +K A YA + ++A + P+ V EP GVVL WNF
Sbjct: 60 V---EKCAWICRYYA----ENAEAFLADE----PIETDAGKAYVRYEPLGVVLGIMPWNF 108
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC-------KAIKVTNGG 173
P + AGNTV+LK + CA + E L+ + + + + +
Sbjct: 109 PFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE---LFREAGFPEGVFQNLLIDSDQ 165
Query: 174 VDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDI 232
V E ++ + + TGS R G V + A K+L LELGG P I+ L D+
Sbjct: 166 V---EAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIV--LDDA-DL 219
Query: 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS--- 289
VK + G+ GQ C+ +V + +E + +P D +
Sbjct: 220 DKAVKTAVKGRL-QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLG 278
Query: 290 -ISRIINEYHFERLRKLLKDPLVADAI------VHGG-LLDKENLFIEPTILLDPPLDAE 341
++R + LR L + V +A+ + GG D F PT+L D
Sbjct: 279 PLAR-------KDLRDELHE-QVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMP 330
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
EE+FGP+ +I + + +E+I N P L FT D +++ +G + N
Sbjct: 331 AYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFIN 390
Query: 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
+V+ LPFGGV +SG GR G + F + K +
Sbjct: 391 G-MVKSDPR-LPFGGVKRSGYGRELGRFGIREFVNIKTVW 428
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 1e-52
Identities = 117/351 (33%), Positives = 167/351 (47%), Gaps = 29/351 (8%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFL-AET----- 157
V P GVV + S +NFP+ LA+ + A+A GN V+LKP L AE
Sbjct: 94 VRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAG 153
Query: 158 IP---LYLDCKAIKVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTL 213
+P L + V GG ++ + L++ + I FTGS VG + A +HL V L
Sbjct: 154 LPKGVLNV------VPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVAL 207
Query: 214 ELGGKCPAI-LDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESL 272
ELGG P I LD D+ + V G F GQ+C+ ILV + +E L
Sbjct: 208 ELGGNNPLIVLDD----ADLDLAVSAAAFGAFLH-QGQICMAAGRILVHESVYDEFVEKL 262
Query: 273 KTTIKKF-YGENPKDSK-SISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIE 329
K G +P+D I +INE +R+ +++D + A A ++ GG E LF +
Sbjct: 263 VAKAKALPVG-DPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGG--TYEGLFYQ 319
Query: 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389
PT+L D D I EEIFGP+ P+I ++ +E++E N L+ FT+D
Sbjct: 320 PTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAF 379
Query: 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+G + ND V V PFGGV SG GR+ G S E F+ + I
Sbjct: 380 AERLETGMVHINDQTVNDEPHV-PFGGVKASGGGRFGGPASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 182 bits (465), Expect = 2e-52
Identities = 132/435 (30%), Positives = 196/435 (45%), Gaps = 49/435 (11%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE----IGLIKKSAKYALSCLDKW 85
R L + EL++ ++++ K L ++GK P++ R E I L K +A+ A
Sbjct: 45 RYKILMKVAELIERRKEELAKLLTIEVGK-PIKQSRVEVERTIRLFKLAAEEA------- 96
Query: 86 MAPKKRRLPLLFFPASGE---------VVSEPFGVVLICSAWNFPINLALEPLIGAIAAG 136
+ L P V EP GVV + +NFP NL + AIA G
Sbjct: 97 -----KVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVG 151
Query: 137 NTVMLKPSELAVECASFLAETI-----PLYLDCKAIKVTNGGVDVC--EQLLQQKWNKIF 189
N+V++KPS A LA+ + P I V G E + K N I
Sbjct: 152 NSVVVKPSSNTPLTAIELAKILEEAGLPP----GVINVVTGYGSEVGDEIVTNPKVNMIS 207
Query: 190 FTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASC 247
FTGS VG ++ S A V LELGG P I+ D D++ V + G+F +
Sbjct: 208 FTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLKDA-----DLERAVSIAVRGRFENA 262
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLL 306
GQVC V ILVE++ ++ L +KK +P D + + +I+ ER+ L+
Sbjct: 263 -GQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLV 321
Query: 307 KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
D + + G E F PT+L + D +M EE+FGP+LPI + + +E++E
Sbjct: 322 NDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEI 381
Query: 367 INSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND-TLVQQLCDVLPFGGVGQSGIGRY 425
NS L FT D ++ +G ++ ND T + D LPFGG +SGIGR
Sbjct: 382 ANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRW--DNLPFGGFKKSGIGRE 439
Query: 426 HGHYSFETFSHEKAI 440
Y+ + EK I
Sbjct: 440 GVRYTMLEMTEEKTI 454
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 6e-51
Identities = 126/452 (27%), Positives = 203/452 (44%), Gaps = 40/452 (8%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP-----V 61
+ E+ LA R + R L +LL+ ++ K + + GK P V
Sbjct: 22 DAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGK-PIKDARV 80
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRR---LPLLFFPASGE----VVSEPFGVVLI 114
E R I ++ +A+ A ++ R +PL S + EP GVVL
Sbjct: 81 EVDR-AIDTLRLAAEEA----------ERIRGEEIPLDATQGSDNRLAWTIREPVGVVLA 129
Query: 115 CSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP---LYLDCKAIKVTN 171
+ +NFP+NL L AIA G V+LKP+ A LA+ + + +
Sbjct: 130 ITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGE 189
Query: 172 GGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLD 231
V ++ + FTGS VG + + A + LELGG P I+D D
Sbjct: 190 REVLGDAFAADERVAMLSFTGSAAVGEALRANAGG--KRIALELGGNAPVIVD---RDAD 244
Query: 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-I 290
+ ++ + G F GQVC+ V I V ++ IE+ +KK +P D + +
Sbjct: 245 LDAAIEALAKGGFYHA-GQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDV 303
Query: 291 SRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFG 349
+I+E ER+ + +++ + A A ++ GG D +PT+L D P D ++ TEE FG
Sbjct: 304 GPLISEEAAERVERWVEEAVEAGARLLCGGERDGA--LFKPTVLEDVPRDTKLSTEETFG 361
Query: 350 PILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND-TLVQQL 408
P++PII ++ +E+I NS L FT+D + G ++ ND + +
Sbjct: 362 PVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRT- 420
Query: 409 CDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
D +PFGGV +SG+GR Y+ E + EK +
Sbjct: 421 -DWMPFGGVKESGVGREGVPYAMEEMTEEKTV 451
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 178 bits (455), Expect = 8e-51
Identities = 107/451 (23%), Positives = 189/451 (41%), Gaps = 34/451 (7%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
+ L R + + RK + +ELL N D+I + L +G+ P+
Sbjct: 19 AVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGR-PIAQAGG 77
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
EI + + A+Y +S ++ +A + F + EP GVVLI + WN+P A+
Sbjct: 78 EIRGMLERARYMISIAEEALADIRVPEKDGF---ERYIRREPLGVVLIIAPWNYPYLTAV 134
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAET-----IPLYLDCKAIKVTNGGVDVCEQLL 181
+I A+ AGN V+LK S C A +P + +V + + L+
Sbjct: 135 NAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGV----FQVLHLSHETSAALI 190
Query: 182 QQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240
+ + FTGS G + AAA V LELGGK PA + D+ + ++
Sbjct: 191 ADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAY---VRPDADLDAAAESLV 247
Query: 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHF 299
G F + GQ C ++ I V + +E+ +K + G+ S ++ +++
Sbjct: 248 DGAFFNS-GQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAA 306
Query: 300 ERLRKLLKDPLVADAIVH--GGLLDKENL---FIEPTILLDPPLDAEIMTEEIFGPILPI 354
+ +R + D + A G L ++ ++ PT+L + +M EE FGP++ I
Sbjct: 307 DFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGI 366
Query: 355 ITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDV--- 411
+ + + E+I +N L +TKD + + +G++ N CD
Sbjct: 367 MKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNR------CDYLDP 420
Query: 412 -LPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
L + GV SG G ++ + K+
Sbjct: 421 ALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 8e-50
Identities = 110/349 (31%), Positives = 168/349 (48%), Gaps = 26/349 (7%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----I 158
V P GVV + +N+P+ LA + + A+AAGNTV+LKPSE +AE +
Sbjct: 115 SVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGL 174
Query: 159 PLYLDCKAI--KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
P K + VT GG +V ++L+ + + FTGS VG + A +HL +TLEL
Sbjct: 175 P-----KGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLEL 229
Query: 216 GGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLK 273
GGK P I+ D D+ V+ G F GQ+C+ I+VE+ ++
Sbjct: 230 GGKNPLIVLADA-----DLDYAVRAAAFGAFMH-QGQICMSASRIIVEEPVYDEFVKKFV 283
Query: 274 TTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIEPT 331
K +P+D + I +I+ ER+++ ++D + A ++ GG + F +PT
Sbjct: 284 ARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGG--KYDGNFYQPT 341
Query: 332 ILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391
+L D D I EE FGP+ +I + +E++E N L+ T D ++
Sbjct: 342 VLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAE 401
Query: 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
SG + ND + V PFGGV SG GR G +S E F+ K I
Sbjct: 402 RLESGMVHINDPTILDEAHV-PFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 5e-49
Identities = 111/357 (31%), Positives = 172/357 (48%), Gaps = 35/357 (9%)
Query: 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSEL----AVECASFLAET 157
G V+ EP GVV I + WNFP + + L A+AAG TV++KPSE + A L E
Sbjct: 113 GLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEA 172
Query: 158 -IPLYLDCKAI--KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTL 213
+P + VT G V + + + + + FTGS RVG + +AAA++L V+L
Sbjct: 173 GLP-----AGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSL 227
Query: 214 ELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIES 271
ELGGK P I+ D D+ ++ G + + G+ C +LV + A + +
Sbjct: 228 ELGGKNPQIVFADA-----DLDAAADAVVFGVYFN-AGECCNSGSRLLVHESIADAFVAA 281
Query: 272 LKTTIKKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGG--LLDKENLF 327
+ +K G+ + IINE ++ + A ++ GG L LF
Sbjct: 282 VVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLF 341
Query: 328 IEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD----E 383
+PTI D D I EEIFGP+L ++T + + E+I N L+ ++KD
Sbjct: 342 YQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTAL 401
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
T ++I +GT ++ +T + + LPFGG QSGIGR G Y E ++ K +
Sbjct: 402 TVARRIRAGT-----VWVNTFLDGSPE-LPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 9e-49
Identities = 126/450 (28%), Positives = 202/450 (44%), Gaps = 29/450 (6%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV 61
A+ +++ +A + F + R+ L A+ + ++ N +++ + L + GK P+
Sbjct: 15 VASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGK-PL 73
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLP--LLFFPASGEVVSE--PFGVVLICSA 117
+ E+G +Y S LP ++ + V P GVV
Sbjct: 74 AEAQFEVGGAVAWLRYTASL----------DLPDEVIEDDDTRRVELRRKPLGVVAAIVP 123
Query: 118 WNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVC 177
WNFP+ LA + A+ AGNTV+LKPS C L E L + V +GG ++
Sbjct: 124 WNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVLPPGVLNVVSGGDELG 183
Query: 178 EQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKV 234
L KI FTGS G VM++AAK L VTLELGG AI+ D DI
Sbjct: 184 PALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDV-----DIDA 238
Query: 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRI 293
++ G F + GQVC + + V + E+L K + D + + +
Sbjct: 239 VAPKLFWGAFINS-GQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPV 297
Query: 294 INEYHFERLRKLLKDPLVADA-IVHGGL-LDKENLFIEPTILLDPPLDAEIMTEEIFGPI 351
N+ ++++++L++D A ++ GG LD FI PTI+ DPP + I+ EE FGP+
Sbjct: 298 QNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPV 357
Query: 352 LPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDV 411
LP++ ++ E I N L ++ D + + +G++ N T D
Sbjct: 358 LPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWIN-THGALDPDA 416
Query: 412 LPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
PFGG QSGIG G + ++ + I
Sbjct: 417 -PFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 171 bits (437), Expect = 5e-48
Identities = 126/432 (29%), Positives = 201/432 (46%), Gaps = 33/432 (7%)
Query: 24 TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLD 83
T + R + L +LL++N++++ L ++GK T +D + + ++ Y ++
Sbjct: 57 TMPLEERIDCLHKFADLLKENKEEVANLLMWEIGK----TLKDALKEVDRTIDYIRDTIE 112
Query: 84 KWMAPKKRRLPLLFFPAS-------GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAG 136
K+ L +V EP GVVL +N+P+NL + LI A+ G
Sbjct: 113 ---ELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMG 169
Query: 137 NTVMLKPSELAVECASFLAETIPLYLDCKAIK-----VTNGGVDVCEQLLQ-QKWNKIFF 190
NTV+ KP+ V LAE + D K VT G ++ + L+ + + I F
Sbjct: 170 NTVVFKPATQGVLLGIPLAE---AFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISF 226
Query: 191 TGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQ 250
TGS VG+ + + LELGGK PAI+ L D+++ K I+ G S +GQ
Sbjct: 227 TGSTEVGNRLKKQHPM--KRLVLELGGKDPAIV--LPD-ADLELAAKEIVKGAL-SYSGQ 280
Query: 251 VCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKD-SKSISRIINEYHFERLRKLLKDP 309
C + +LV + A L+E LK + K P D I+ +I+ + + L+ D
Sbjct: 281 RCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDA 340
Query: 310 LVADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFIN 368
+ A +++GG + NL I PT+L D + EE FGP+LPII +N+I+E+IE N
Sbjct: 341 VAKGATVLNGGGREGGNL-IYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELAN 399
Query: 369 SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGH 428
L FTKD +++ G++ N Q+ D PF G SGIG
Sbjct: 400 KSNYGLQASIFTKDINKARKLADALEVGTVNINSK-CQRGPDHFPFLGRKDSGIGTQGIG 458
Query: 429 YSFETFSHEKAI 440
+ + + K I
Sbjct: 459 DALRSMTRRKGI 470
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 2e-47
Identities = 130/459 (28%), Positives = 206/459 (44%), Gaps = 33/459 (7%)
Query: 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
AA +++ + R+ F + A R LRA+ E +++ +++ + +D GK
Sbjct: 14 PAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPL 73
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNF 120
E D + YA ++ A +R +PL V EP GVV + + WNF
Sbjct: 74 DEAAWDVDDVAGCFEYYADLA-EQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNF 132
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK--------VTNG 172
P+ +A + A+AAG TV+LKPSEL LAE VT
Sbjct: 133 PLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEI------AAEAGLPPGVLNVVTGT 186
Query: 173 GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSP 229
G + L +KI FTGS GS VM AAA+ + PV+LELGGK P I+ D
Sbjct: 187 GDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDA---- 242
Query: 230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK- 288
D++ V+ + G F + NGQ+C +LV + A +E L T + +P +
Sbjct: 243 -DLEKAVEWAMFGCFWN-NGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGV 300
Query: 289 SISRIINEYHFERLRKLLKDPLVADA-IVHGGL---LDKENLFIEPTILLDPPLDAEIMT 344
+ ++++ +E++ + A ++ GG ++ FI PT+ D P D+ I
Sbjct: 301 RLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWR 360
Query: 345 EEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTL 404
EEIFGP+L + + E+I N LA ++D ++ +G + N
Sbjct: 361 EEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN--- 417
Query: 405 VQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
Q C P+GG +SGIGR G + + + K I +
Sbjct: 418 CSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 3e-47
Identities = 113/376 (30%), Positives = 189/376 (50%), Gaps = 47/376 (12%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R LR L +L+++N D++ K + ++ GK + R E+ + +A Y +D +MA
Sbjct: 59 RAAYLRKLADLIRENADELAKLIVEEQGK-TLSLARVEV---EFTADY----ID-YMAEW 109
Query: 90 KRRLPLLFFPASGEVVS------------EPFGVVLICSAWNFPINLALEPLIGAIAAGN 137
RR+ GE++ P GVV WNFP L L A+ GN
Sbjct: 110 ARRI-------EGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGN 162
Query: 138 TVMLKPSEL----AVECASFLAE-TIPLYLDCKAIKVTNG-GVDVCEQLLQQ-KWNKIFF 190
T+++KPSE A+E A + E +P + + + G G V + L+ K I
Sbjct: 163 TIVIKPSEETPLNALEFAELVDEAGLPAGV----LNIVTGRGSVVGDALVAHPKVGMISL 218
Query: 191 TGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQ 250
TGS G +M AAA+++T V+LELGGK PAI+ D+ + VK I+ + +C GQ
Sbjct: 219 TGSTEAGQKIMEAAAENITKVSLELGGKAPAIV---MKDADLDLAVKAIVDSRIINC-GQ 274
Query: 251 VCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDP 309
VC + + V + +E L +K +P D+ + + ++NE +++ ++++
Sbjct: 275 VCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERA 334
Query: 310 LVADA-IVHGGLLDKEN--LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
+ A A ++ GG + F EPT+L + D EI+ EEIFGP+LP++ +++ E+IE
Sbjct: 335 VEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIEL 394
Query: 367 INSRPKPLAIYAFTKD 382
N L Y +T++
Sbjct: 395 ANDSEYGLTSYIYTEN 410
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 1e-46
Identities = 132/461 (28%), Positives = 198/461 (42%), Gaps = 50/461 (10%)
Query: 7 EIEDKLAELRQTFRSGI-TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
+++ +A R+ F +G + R LR L E L+ ++++ L ++G PV T R
Sbjct: 20 DVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGA-PVMTAR 78
Query: 66 DE-----IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNF 120
IG ++ A A S ++ P L P V EP GVV + WNF
Sbjct: 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVP---ALRGGPGRRVVRREPVGVVAAITPWNF 135
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLYLDCKAIKVTNGGV 174
P L L L A+AAGNTV+LKP+ A L E I ++ VT
Sbjct: 136 PFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNV----VTGSDN 191
Query: 175 DVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI-LDTLSSPLDI 232
V E L + + + FTGS VG +M+ AA L V LELGGK I LD D+
Sbjct: 192 AVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLDDA----DL 247
Query: 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSIS- 291
+G GQ C +LV + ++E+L + +P D ++
Sbjct: 248 AAAAPAAVGV-CMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMG 306
Query: 292 RIINEYHFERLRKLLKDPLVADA-IVHGG----LLDKENLFIEPTILLDPPLDAEIMTEE 346
+I+ +R+ + A +V GG LDK ++EPT+ D D I EE
Sbjct: 307 PLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDK-GFYVEPTLFADVDNDMRIAQEE 365
Query: 347 IFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE----TFKKQIVSGTSS--GSLIF 400
IFGP+L +I ++ E++ N L+ ++ D ++I +G+ G +
Sbjct: 366 IFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGY 425
Query: 401 N-DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
D PFGG QSG+GR +G E F K+I
Sbjct: 426 GPDA---------PFGGYKQSGLGRENGIEGLEEFLETKSI 457
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 4e-46
Identities = 136/454 (29%), Positives = 211/454 (46%), Gaps = 50/454 (11%)
Query: 5 MG--EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE 62
MG E D +A F S + + R LR +L+ N++ + + + + GK P++
Sbjct: 59 MGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGK-PLK 117
Query: 63 TYRDEIGLIKKSAKYALSCLDKWMAPKKRR-----LPLLFFPASGEVVSEPFGVVLICSA 117
E+ Y S L+ + A + +R +P F V+ +P GVV +
Sbjct: 118 EAIGEVA-------YGASFLE-YFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITP 169
Query: 118 WNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IP---LYLDCKAIKV 169
WNFP+ + + A+AAG TV++KPSEL A AE IP L + V
Sbjct: 170 WNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNV------V 223
Query: 170 TNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTL 226
++ + LL K KI FTGS VG +M+ AA + V+LELGG P I+ D
Sbjct: 224 MGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDA- 282
Query: 227 SSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEK----KFAATLIESLKTTIKKFYGE 282
D+ V VK + KF + GQ CV + ILV++ KFA ++++ + G+
Sbjct: 283 ----DLDVAVKGALASKFRNS-GQTCVCANRILVQEGIYDKFAEAFSKAVQKLV---VGD 334
Query: 283 NPKDSKSISRIINEYHFERLRKLLKDPLVADAIVH-GGLLDKENL-FIEPTILLDPPLDA 340
++ + +INE +++ ++D + A V GG F EPT+L D D
Sbjct: 335 GFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDM 394
Query: 341 EIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400
I EE+FGP+ P+ +E+I N LA Y FT+D ++ G +
Sbjct: 395 LIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGV 454
Query: 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
N+ L+ +V PFGGV QSG+GR Y + +
Sbjct: 455 NEGLIST--EVAPFGGVKQSGLGREGSKYGIDEY 486
|
Length = 498 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 7e-46
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 20/342 (5%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GVV + +NFP+NL + AIAAGN V+LKP+ A LAE L L+
Sbjct: 122 EPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAE---LLLEAGL 178
Query: 167 IK-----VTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCP 220
K VT G V + L+ + I FTGSP VG + A L VTLELG
Sbjct: 179 PKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAA 236
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+D + D++ V+R + G FA+ GQVC+ V I V + +E KK
Sbjct: 237 VIVDADA---DLEKAVERCVSGAFAN-AGQVCISVQRIFVHEDIYDEFLERFVAATKKLV 292
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPPL 338
+P D + + +I+E ER+ + +++ + A ++ GG ++ +EPT+L D P
Sbjct: 293 VGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGK--RDGAILEPTVLTDVPP 350
Query: 339 DAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSL 398
D +++ EE+F P++ + + + E+I N P L FT D + G +
Sbjct: 351 DMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGV 410
Query: 399 IFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ ND+ D +P+GGV +SG GR Y+ E + K +
Sbjct: 411 MINDS-STFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLV 451
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 1e-45
Identities = 112/362 (30%), Positives = 159/362 (43%), Gaps = 46/362 (12%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL--- 160
+ EP+GV WN+P+ +A L A+AAGNTV++KP AE PL
Sbjct: 140 TLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKP-----------AENTPLSLL 188
Query: 161 YLDCKAIK----------VTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAAKHL 208
Y +K + G V L + +KI FTGS G +VM AAA++L
Sbjct: 189 YF-ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNL 247
Query: 209 TPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAA 266
VTLE GGK PA++ D D+ VK G + +GQ C I V++
Sbjct: 248 KAVTLECGGKSPALVFEDA-----DLDQAVKWAAAGIMYN-SGQNCTATSRIYVQESIYD 301
Query: 267 TLIESLKTTIKKFY--GENPKDSKSISRIINEYHFERLR------KLLKDPLVADAIVHG 318
+E +K+ Y G D + +++ ++R+ K LV
Sbjct: 302 KFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAP 361
Query: 319 GLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA 378
L K FI PTI D P D I+ EEIFGP++ I +E+I+ N LA
Sbjct: 362 EGLGKGY-FIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAV 420
Query: 379 FTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEK 438
FTKD ++ +G + N + +PFGG SGIGR G Y ET++ K
Sbjct: 421 FTKDIRRAHRVARELEAGMVWINSS--NDSDVGVPFGGFKMSGIGRELGEYGLETYTQTK 478
Query: 439 AI 440
A+
Sbjct: 479 AV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 2e-45
Identities = 121/456 (26%), Positives = 194/456 (42%), Gaps = 37/456 (8%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV 61
A+ +++ +A F S + A R L L + +++N +++ ++ GK
Sbjct: 15 DASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH 74
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS--------EPFGVVL 113
DE+ A+ ++ A R L PA+GE + EP GVV
Sbjct: 75 LVRDDELPG-------AVDNF-RFFAGAARTLE---GPAAGEYLPGHTSMIRREPIGVVA 123
Query: 114 ICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGG 173
+ WN+P+ +A + A+AAGNTV+LKPSE LAE L + V GG
Sbjct: 124 QIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAEVLPPGVVNVVCGG 183
Query: 174 VDVCEQLL--QQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSP 229
L + + TGS R G V AAA L V LELGGK P I+ D
Sbjct: 184 GASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA---- 239
Query: 230 LDIKVTVKRIIGGKFASCN-GQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDS 287
D+ V I + N GQ C + V + + +L + G+ +
Sbjct: 240 -DLDAAVAGIATAGY--YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDED 296
Query: 288 KSISRIINEYHFERLRKLLKDPLVADA-IVHGG-LLDKENLFIEPTILLDPPLDAEIMTE 345
+ + + ER+ + + A A ++ GG + F EPT++ D EI+ E
Sbjct: 297 TEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQE 355
Query: 346 EIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLV 405
EIFGP++ + ++ E+IE N LA +T+D ++ + G++ N +
Sbjct: 356 EIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIP 415
Query: 406 QQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
L +P GG QSG G+ Y+ E ++ K +M
Sbjct: 416 --LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 3e-45
Identities = 108/350 (30%), Positives = 152/350 (43%), Gaps = 22/350 (6%)
Query: 105 VSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC 164
V EP GVV WN P+ LA + A+ AGNTV+LK +E A LAE + L
Sbjct: 114 VREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVLPA 173
Query: 165 KAIKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI 222
+ V G + C L +K+ FTGS VG I+ AAA L PV+LELGGK P I
Sbjct: 174 GVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMI 233
Query: 223 LDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGE 282
+ D+ V I G + GQ C + V + +E L + K
Sbjct: 234 ---VFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIG 290
Query: 283 NPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLL-----DKENLFIEPTILL 334
+P D + I II+E F ++ + L ++ GG L + F++PTI
Sbjct: 291 DPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFS 350
Query: 335 DPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394
+ + EEIFGP+L I + E I N LA Y +T+D +
Sbjct: 351 GVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALE 410
Query: 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFET----FSHEKAI 440
+G + N QQ +GG QSG+GR S E F+ +K +
Sbjct: 411 AGWVQVNQGGGQQPG--QSYGGFKQSGLGR---EASLEGMLEHFTQKKTV 455
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 5e-45
Identities = 127/453 (28%), Positives = 211/453 (46%), Gaps = 50/453 (11%)
Query: 14 ELRQTFRSGITKSVAW-------RKNQLRALIELLQDNEDKIFKALHQDLG----KHPVE 62
++ + +R+ W R L ++L++ D+I + L ++ G K +E
Sbjct: 33 DVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKANIE 92
Query: 63 TYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPI 122
+ + + +++A + L + R LP V EP GVV + S WNFP+
Sbjct: 93 -WGAAMAITREAATFPL-------RMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPL 144
Query: 123 NLALEPLIGAIAAGNTVMLKP-SELAVECASFLAET-----IPLYLDCKAI--KVTNGGV 174
+L++ + A+A GN V+LKP S+ + LA+ +P K + V G
Sbjct: 145 HLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLP-----KGVLNVVVGAGS 199
Query: 175 DVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233
++ + ++ + I FTGS VG + A +HL V LELGG P ++ DI
Sbjct: 200 EIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVV---LEDADID 256
Query: 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISR 292
V + GKF GQ+C+ ++ I+V + +E +K YG+ +
Sbjct: 257 AAVNAAVFGKFLH-QGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGP 315
Query: 293 IINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPI 351
+INE + L ++ + A ++ GG + E +EPT+L D D EI EEIFGP+
Sbjct: 316 LINESQVDGLLDKIEQAVEEGATLLVGG--EAEGNVLEPTVLSDVTNDMEIAREEIFGPV 373
Query: 352 LPIITLNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQIVSGTSSGSLIFNDTLVQQ 407
PII ++ +E++E N L+ FT D F ++I +G + ND V
Sbjct: 374 APIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTH----INDQPVND 429
Query: 408 LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
V PFGG SG+GR++G ++ E F+ +K I
Sbjct: 430 EPHV-PFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 161 bits (411), Expect = 2e-44
Identities = 118/364 (32%), Positives = 165/364 (45%), Gaps = 46/364 (12%)
Query: 101 SGEVVSEPFGVV-LICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI- 158
+ VV EP GV LI + WN+P+N + + A+AAG TV+LKPSE+A A LAE +
Sbjct: 123 NSLVVREPIGVCGLI-TPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILD 181
Query: 159 ----P-----LYLDCKAIKVTNGGVDVCEQLL-QQKWNKIFFTGSPRVGSIVMSAAAKHL 208
P L V G V E L + + FTGS R G V AAA +
Sbjct: 182 EAGLPAGVFNL--------VNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTV 233
Query: 209 TPVTLELGGKCPAI-LDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAAT 267
V LELGGK I LD D++ V R + FA+ +GQ C +LV + A
Sbjct: 234 KRVALELGGKSANIILDD----ADLEKAVPRGVAACFAN-SGQSCNAPTRMLVPRSRYAE 288
Query: 268 LIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKD------PLVADAIVHGGL 320
E + + +P+D + + + + F+R++ ++ LVA GG
Sbjct: 289 AEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVA-----GGP 343
Query: 321 LDKENL----FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI 376
E L F++PT+ D D I EEIFGP+L II ++ E+I N P LA
Sbjct: 344 GRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAG 403
Query: 377 YAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSH 436
Y ++ D + + +G + N PFGG QSG GR G Y E F
Sbjct: 404 YVWSADPERARAVARRLRAGQVHINGAAFNPG---APFGGYKQSGNGREWGRYGLEEFLE 460
Query: 437 EKAI 440
K+I
Sbjct: 461 VKSI 464
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 2e-44
Identities = 125/451 (27%), Positives = 201/451 (44%), Gaps = 49/451 (10%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E E + + F++ + R + LR L+ +N+D + + + + GK P++ +
Sbjct: 20 ETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDLARLITLENGK-PLKEAKG 78
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRL--PLLFFPASGE---VVSEPFGVVLICSAWNFP 121
EI YA S L +W A + +R+ + P S + V+ +P GV + WNFP
Sbjct: 79 EI-------LYAASFL-EWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFP 130
Query: 122 INLALEPLIGAIAAGNTVMLKPSE-----------LAVECASFLAETIPLYLDCKAIKVT 170
+ A+AAG TV++KP+E LA + A + + +A +V
Sbjct: 131 AAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQ-AGIPKGVLNVITGSRAKEV- 188
Query: 171 NGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL 230
G + KI FTGS VG I+M +A + V++ELGG P I+
Sbjct: 189 --GNVLTTS---PLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVF---DDA 240
Query: 231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEK----KFAATLIESLKTTIKKFYGENPKD 286
D+ V+ + KF + GQ CV + + V +FA L E+ +KK N D
Sbjct: 241 DLDQAVEGAMASKFRNA-GQTCVCANRLYVHDGIYDEFAKKLAEA----VKKLKVGNGLD 295
Query: 287 SKS-ISRIINEYHFERLRKLLKDPLV--ADAIVHGGLLDKENLFIEPTILLDPPLDAEIM 343
+INE E++ K + D + A + G + F EPT+L + D +
Sbjct: 296 EGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVS 355
Query: 344 TEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT 403
EE FGP+ P+ ++ +E I N LA Y F++D + ++ G + N
Sbjct: 356 KEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTG 415
Query: 404 LVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
L+ + V PFGGV QSG+GR Y E +
Sbjct: 416 LISNV--VAPFGGVKQSGLGREGSKYGIEEY 444
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 161 bits (411), Expect = 2e-44
Identities = 111/355 (31%), Positives = 160/355 (45%), Gaps = 41/355 (11%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GV WNFP+ + L A+AAGNTV+LKP+E A +LAE I +A
Sbjct: 140 EPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIK-----EA 194
Query: 167 ------IKVTNG-GVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGG 217
+ + G G + +KI FTGS VG +M AAAK +L VTLELGG
Sbjct: 195 GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGG 254
Query: 218 KCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTT 275
K P I+ D D+ V+ G F + GQ C I V++ +E K
Sbjct: 255 KSPNIVFDDA-----DLDKAVEWAAFGIFFN-QGQCCCAGSRIFVQESIYDEFVEKFKAR 308
Query: 276 IKKFYGENPKDSKSI-SRIINEYHFERLRKLLKDPLVADA-IVHGG-LLDKENLFIEPTI 332
+K +P D + +++ F+++ ++ A ++ GG + FI+PT+
Sbjct: 309 AEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTV 368
Query: 333 LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQ 388
D D +I EEIFGP++ I+ E IE N LA FTKD +
Sbjct: 369 FTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRA 428
Query: 389 IVSGTSSGSLIFNDTLVQQLCDV---LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ +GT ++ V +PFGG QSG GR G E ++ KA+
Sbjct: 429 LKAGT-----VW----VNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 4e-44
Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 19/346 (5%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCK 165
EP GVV WNF + +A+ + A+A G T+++KPSE +AE +
Sbjct: 141 EPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDG 200
Query: 166 AIKVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILD 224
+ V NG V QL+ K+ FTGS G + AA LT VTLELGGK A
Sbjct: 201 VLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAF- 259
Query: 225 TLSSPLDIKVTVKRIIGGKFASC---NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYG 281
L + ++ G + GQVC + V + L+ LK + F
Sbjct: 260 -LKD-----ADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQV 313
Query: 282 ENPKDSKS-ISRIINEYHFERLRKLLKDPLVA-DAIVHGG-LLDKENLFIEPTILLDPPL 338
+P D + N+ HF+++ L D D IV GG L E F++PT++L
Sbjct: 314 GSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSA 373
Query: 339 DAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSL 398
D+ +M EE FGP++ + + +E I+ IN P L +T + + + + +G++
Sbjct: 374 DSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTV 433
Query: 399 IFN-DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443
N T + +PFGG+ QSGIGR G + ++ K++M R
Sbjct: 434 WVNMHTFLDP---AVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 7e-44
Identities = 133/454 (29%), Positives = 203/454 (44%), Gaps = 54/454 (11%)
Query: 16 RQTFRSGITKSVAWRKNQ-------LRALIELLQDNEDKIFKALHQDLGKHPVETYRDEI 68
R F G AWRK LR L +L++ N +++ + +D GK ET R ++
Sbjct: 29 RAAFEGG-----AWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRET-RAQV 82
Query: 69 GLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEP 128
+ + +Y DK + +P+ EP GVV + WN P+ L +
Sbjct: 83 RYLAEWYRYYAGLADKI---EGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKK 139
Query: 129 LIGAIAAGNTVMLKPSELA----VECASFLAET-IPLYLDCKAIK-----VTNGGVDVCE 178
L A+AAGNTV+LKPSE +E A E P VT G + E
Sbjct: 140 LAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFP--------PGVVNVVTGFGPETGE 191
Query: 179 QLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVT 235
L++ KI FTG G + AAA++L PVTLELGGK P I+ D D+
Sbjct: 192 ALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDA-----DLDAA 246
Query: 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRII 294
V ++ G FA+ GQ CV +LV++ +E L + +P D ++ + +
Sbjct: 247 VNGVVAGIFAA-AGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLA 305
Query: 295 NEYHFERLRKLLKDPLVADA-IVHGG------LLDKENLFIEPTILLDPPLDAEIMTEEI 347
E E++ + + A ++ GG L F EPTIL D D I EE+
Sbjct: 306 TERQLEKVERYVARAREEGARVLTGGERPSGADLGA-GYFFEPTILADVTNDMRIAQEEV 364
Query: 348 FGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQ 407
FGP+L +I ++ +E+I N LA +T+D ++ +G++ N +
Sbjct: 365 FGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNT--YRA 422
Query: 408 LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
L PFGG SGIGR +G + ++ K++
Sbjct: 423 LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 8e-44
Identities = 123/467 (26%), Positives = 201/467 (43%), Gaps = 57/467 (12%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQ-LRALIELLQDNEDKIFKALHQDLGKHP 60
+++ + R+ F SG + + + L + L++++ D++ + D GK
Sbjct: 15 RGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPL 74
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLL--FFPASGEVVSEPFGVVLICSAW 118
+ D + Y + DK +PL +F V EP GV W
Sbjct: 75 TQARADVEAAARYFEYYGGAA-DKLHG---ETIPLGPGYFVY---TVREPHGVTGHIIPW 127
Query: 119 NFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-PLYLDCKAIKVTNG-GVDV 176
N+P+ + + A+AAGN V++KP+E A A LAE L A+ V G G +
Sbjct: 128 NYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEA 187
Query: 177 CEQLLQQKW-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI------LDTLSSP 229
L+ + I FTGS G VM AAA+++ PVTLELGGK P I L+
Sbjct: 188 GAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADADLEAA--- 244
Query: 230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYG-------E 282
+ V V II GQ C +LV + ++E L +++F E
Sbjct: 245 --LPVVVNAII-----QNAGQTCSAGSRLLVHRSIYDEVLERL---VERFRALRVGPGLE 294
Query: 283 NPKDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENL----FIEPTILLDPP 337
+P + +I+ +R+ + A IV GG + + F+ PT+L D P
Sbjct: 295 DP----DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVP 350
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
D+ + EEIFGP+L ++ ++ E+I N L +T+D ++ +G
Sbjct: 351 PDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQ 410
Query: 398 LIFNDTL----VQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N+ ++ LPFGGV +SG GR G + ++ K +
Sbjct: 411 VFVNNYGAGGGIE-----LPFGGVKKSGHGREKGLEALYNYTQTKTV 452
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 2e-43
Identities = 123/461 (26%), Positives = 212/461 (45%), Gaps = 52/461 (11%)
Query: 7 EIEDKLAELRQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKIFKALHQ--DLGKHPVE 62
+++ +A R+ F SG+ S A RK L L +L++ + D++ AL + D+GK +
Sbjct: 25 DVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDEL--ALLETLDMGKPISD 82
Query: 63 TYRDEIGLIKKSAKYALSCLDKW---MAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWN 119
++ + ++ +DK +AP A + EP GVV WN
Sbjct: 83 ALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPD-------ALALITREPLGVVGAVVPWN 135
Query: 120 FPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IP---LYLDCKAIKVTN 171
FP+ +A + A+AAGN+V+LKP+E + A LAE +P L + V
Sbjct: 136 FPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNV------VPG 189
Query: 172 GGVDVCEQL-LQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSP 229
G E L L + + FTGS VG + + + +L V LE GGK P I+ +
Sbjct: 190 FGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIV--FADA 247
Query: 230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS 289
D+ + G F + G+VC +LV + +E + +++ +P D +
Sbjct: 248 PDLDAAAEAAAAGIFWN-QGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPAT 306
Query: 290 -ISRIINEYHFERLRKLLKDPLVADA-IVHGG---LLDKENLFIEPTILLDPPLDAEIMT 344
+ +++E HF+++ ++ A +V GG L + F+EPT+ D I
Sbjct: 307 RMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAR 366
Query: 345 EEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDET----FKKQIVSGTSSGSLIF 400
EEIFGP+L +IT ++ +E++ N LA +T D + +++ +GT + F
Sbjct: 367 EEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVN-CF 425
Query: 401 NDTLVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
++ D+ PFGG QSG GR ++ + ++ K
Sbjct: 426 DE------GDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 4e-43
Identities = 128/459 (27%), Positives = 195/459 (42%), Gaps = 44/459 (9%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
+++ + + F++ SVA R N L + + +++N + + A D GK ET
Sbjct: 39 DVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAA 98
Query: 67 EIGLIKKSAKYALSC----------LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICS 116
+I L +Y +D+ L F EP GVV
Sbjct: 99 DIPLAIDHFRYFAGVIRAQEGSLSEIDE------DTLSYHF--------HEPLGVVGQII 144
Query: 117 AWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNG-GVD 175
WNFP+ +A L A+AAGNTV+LKP+ L E I L + V G G +
Sbjct: 145 PWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDLLPKGVVNVVTGFGSE 204
Query: 176 VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDI 232
+ L K+ FTGS VG ++M AA++L PVTLELGGK P I D + + D
Sbjct: 205 AGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDF 264
Query: 233 KVTVKRIIGGK--FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS- 289
+ G+ FA G+VC LV++ IE + NP D ++
Sbjct: 265 ---DDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETM 321
Query: 290 ISRIINEYHFERLRKLLK-------DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEI 342
+ +++ E++ + + L + G LDK F EPT++ D I
Sbjct: 322 MGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGY-FYEPTLIKGGNNDMRI 380
Query: 343 MTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
EEIFGP+L +IT + +E+I N L +T+D ++ G +G + N
Sbjct: 381 FQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVN- 439
Query: 403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
Q PFGG +SGIGR + + K I+
Sbjct: 440 -CYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNIL 477
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 7e-43
Identities = 125/445 (28%), Positives = 189/445 (42%), Gaps = 39/445 (8%)
Query: 16 RQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSA 75
++ F++ +VA R N L + +++ +N++ + D GK ET +I L
Sbjct: 48 QEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHF 107
Query: 76 KYALSCL----DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIG 131
+Y + + L + V+ EP GVV WNFP +A L
Sbjct: 108 RYFAGVIRAEEGSANMIDEDTLSI--------VLREPIGVVGQIIPWNFPFLMAAWKLAP 159
Query: 132 AIAAGNTVMLKPSELA----VECASFLAETIPLYLDCKAIK--VTNGGVDVCEQLLQQK- 184
A+AAGNTV++KPS +E A + + +P K + VT G E LL
Sbjct: 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDVLP-----KGVVNIVTGKGSKSGEYLLNHPG 214
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
+K+ FTGS VG V AAAK L P TLELGGK I + + ++ G
Sbjct: 215 LDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANI---IFDDANWDKALEGAQLGIL 271
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSI-SRIINEYHFERLR 303
+ GQVC I V++ + LK + NP D + +N+ +++
Sbjct: 272 FN-QGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKIL 330
Query: 304 KLLKDPLVADA-IVHGGL------LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
+ A I+ GG LDK FIEPT++++ D + EEIFGP+ +I
Sbjct: 331 SYVDIAKEEGAKILTGGHRLTENGLDKGF-FIEPTLIVNVTNDMRVAQEEIFGPVATVIK 389
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGG 416
E I+ N L FTKD ++ +G + N Q+ PFGG
Sbjct: 390 FKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVN--TYNQIPAGAPFGG 447
Query: 417 VGQSGIGRYHGHYSFETFSHEKAIM 441
+SGIGR + ++ K I
Sbjct: 448 YKKSGIGRETHKSMLDAYTQMKNIY 472
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 8e-43
Identities = 106/359 (29%), Positives = 163/359 (45%), Gaps = 46/359 (12%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IPLY 161
EP GV AWN+PI +A A+A GN ++ KPS A LAE +P
Sbjct: 115 EPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDG 174
Query: 162 LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCP 220
+ V GG + + L + K+ FTGS G VMSAAAK + VTLELGGK P
Sbjct: 175 V----FNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSP 230
Query: 221 AIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK 278
I+ D D++ V + F S GQVC + V++ E L KK
Sbjct: 231 LIIFDDA-----DLENAVNGAMMANFLS-QGQVCSNGTRVFVQRSIKDEFTERLVERTKK 284
Query: 279 FYGENPKDSKS-ISRIINEYHFERLRKLLK-------------DPLVADAIVHGGLLDKE 324
+P D + + +I+E H E++ ++ + +V + + G
Sbjct: 285 IRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENG----- 339
Query: 325 NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDET 384
++ P +L D D I+ EEIFGP++ I+ + +E I N LA FT+D
Sbjct: 340 -FYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ 398
Query: 385 FKKQIVSGTSSGSLI---FNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
++++ +G+ +N + V+ +PFGG QSG GR +G + E ++ K +
Sbjct: 399 RAHRVIAQLQAGTCWINTYNISPVE-----VPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 4e-42
Identities = 115/441 (26%), Positives = 196/441 (44%), Gaps = 38/441 (8%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
++E A R R+ + A R +L+ + D++ + + GK +
Sbjct: 18 ADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF- 76
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRR--LPLLFFPASGEVVSEPFGVVLICSAWNFPIN 123
+E+ + A+Y ++ + P++RR +P+L V P GVV + S WN+P+
Sbjct: 77 EEVLDVAIVARYYARRAERLLKPRRRRGAIPVL---TRTTVNRRPKGVVGVISPWNYPLT 133
Query: 124 LALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK-----VTNGGVDVCE 178
LA+ I A+ AGN V+LKP A + E L ++ + VT G +V
Sbjct: 134 LAVSDAIPALLAGNAVVLKPDSQTALTALWAVE---LLIEAGLPRDLWQVVTGPGSEVGG 190
Query: 179 QLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238
++ + + FTGS G +V A + L +LELGGK P I + D+
Sbjct: 191 AIVDNA-DYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMI---VLEDADLDKAAAG 246
Query: 239 IIGGKFASCNGQVCVGVDYILVEK--------KFAATLIESLKTTIKKFYGENPKDSKSI 290
+ F++ GQ+CV ++ I V + +F A +L+ YG D S
Sbjct: 247 AVRACFSN-AGQLCVSIERIYVHESVYDEFVRRFVART-RALRLGAALDYG---PDMGS- 300
Query: 291 SRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENL---FIEPTILLDPPLDAEIMTEEI 347
+I++ +R+ + D + A V G + +L F EPT+L D E+ EE
Sbjct: 301 --LISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEET 358
Query: 348 FGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQ 407
FGP++ I + + E+IE N L +T+D ++I + +G++ N+
Sbjct: 359 FGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAA 418
Query: 408 LCDV-LPFGGVGQSGIGRYHG 427
+ P GG+ SG+GR HG
Sbjct: 419 WASIDAPMGGMKDSGLGRRHG 439
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 7e-42
Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 29/421 (6%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE----IGLIKKSAKYALSCLDKW 85
R L + L++ +++ + + + GK P++ R E I + +A+ A +
Sbjct: 45 RAAILLHCVARLEERFEELAETIVLEAGK-PIKDARGEVARAIDTFRIAAEEATRIYGEV 103
Query: 86 MAPKKRRLPLLFFPAS----GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVML 141
+ PL G V P G V + +NFP+NL + AIAAG +L
Sbjct: 104 L-------PLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVL 156
Query: 142 KPSELAVECASFLAETI-PLYLDCKAIKVTNGGVDVCEQLLQQKWNKIF-FTGSPRVGSI 199
KP+ A L E + L A V D + L+ + K+ FTGSP VG
Sbjct: 157 KPASRTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWD 216
Query: 200 VMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYIL 259
+ + A K V LELGG I+D S D+ +RII G F GQ C+ V +L
Sbjct: 217 LKARAGKK--KVVLELGGNAAVIVD---SDADLDFAAQRIIFGAFYQA-GQSCISVQRVL 270
Query: 260 VEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA-IVH 317
V + L +K +PKD + + +I+E ER+ + + + A A ++
Sbjct: 271 VHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLT 330
Query: 318 GGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIY 377
GG ++ +EPTIL D P D E+ EE+FGP++ + ++ E++ +N L
Sbjct: 331 GG--KRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAG 388
Query: 378 AFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHE 437
FT+D + G ++ ND ++ D +P+GGV SGIGR Y+ E +
Sbjct: 389 VFTRDLEKALRAWDELEVGGVVINDVPTFRV-DHMPYGGVKDSGIGREGVRYAIEEMTEP 447
Query: 438 K 438
+
Sbjct: 448 R 448
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 153 bits (390), Expect = 2e-41
Identities = 108/357 (30%), Positives = 159/357 (44%), Gaps = 28/357 (7%)
Query: 98 FPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET 157
V EP GVV WN P+ LA + A+AAG TV+LKPS A LAE
Sbjct: 127 GGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEA 186
Query: 158 IPLYLDCKA------IKVTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVMSAAAKHLTP 210
+A + V +V E L++ +K+ FTGS G + + + L
Sbjct: 187 AE-----EAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLAR 241
Query: 211 VTLELGGKCPAI-LDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLI 269
VTLELGGK AI LD D+ V ++ + NGQVCV + ILV + ++
Sbjct: 242 VTLELGGKSAAIVLDD----ADLDAAVPGLVPASLMN-NGQVCVALTRILVPRSRYDEVV 296
Query: 270 ESLKTTIKKFYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADA-IVHGG----LLDK 323
E+L + +P D + I + + ER+ + A +V GG LD+
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
F+EPT+ D D I EEIFGP+L +I ++ +++ N L+ +T D
Sbjct: 357 GW-FVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADV 415
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ +G++ N +L PFGG QSGIGR G + + K+I
Sbjct: 416 ERGLAVARRIRTGTVGVNGF---RLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSI 469
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 152 bits (385), Expect = 8e-41
Identities = 117/348 (33%), Positives = 167/348 (47%), Gaps = 27/348 (7%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIG-AIAAGNTVMLKPSELAVECASFLAETIP-LYLDC 164
EP GV WNFP+ L I A+AAGNT++LKPSEL A ++ + IP
Sbjct: 143 EPIGVCGQIIPWNFPL-LMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPP 201
Query: 165 KAIKVTNGGVDVCEQLL--QQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPA 221
I V +G C + +K+ FTGS VG VM AAAK +L VTLELGGK P
Sbjct: 202 GVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPN 261
Query: 222 ILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-- 279
I+ D++ V G F + +GQVC I V++ ++ K KK
Sbjct: 262 IV---FDDADLESAVVWTAYGIFFN-HGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKV 317
Query: 280 ---YGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILL 334
+ E+ +S+I +ER+ ++ A V G E FIEPTI
Sbjct: 318 GDPFAEDTFQGPQVSQI----QYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFT 373
Query: 335 DPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394
D D +I+ EEIFGP++ +I +E+I+ N LA FT + ++ +
Sbjct: 374 DVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALK 433
Query: 395 SGSLIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+G++ N + L Q +PFGG QSGIGR G Y+ E ++ KA+
Sbjct: 434 AGTVWVNCYNLLHHQ----VPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 1e-40
Identities = 117/374 (31%), Positives = 168/374 (44%), Gaps = 43/374 (11%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163
V EP GV + + WN+P+ A L A+AAGNTV++KPSE+ L E L +
Sbjct: 130 TVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFE---LIEE 186
Query: 164 CKAIK-----VTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGG 217
VT G V +L + + + FTG G +M AAA ++ V LELGG
Sbjct: 187 AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGG 246
Query: 218 KCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVE----KKFAATLIES 271
K P I+ D D + V + + G F + GQVC +LVE KF A L E
Sbjct: 247 KNPNIVFADA-----DFETAVDQALNGVFFN-AGQVCSAGSRLLVEESIHDKFVAALAER 300
Query: 272 LKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGG--LLDKE---N 325
K IK G + D++ +++ H E++ ++ A +V GG E
Sbjct: 301 AKK-IKLGNGLDA-DTEM-GPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKG 357
Query: 326 LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETF 385
F+EPTI D I+ EEIFGP+L + + +E+I N P LA +TKD
Sbjct: 358 YFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIAR 417
Query: 386 KKQIVSGTSSGSLIFND---TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
++ +G++ ND + P+GG QSGIGR G E + K I
Sbjct: 418 ANRVARRLRAGTVWINDYHPYFAEA-----PWGGYKQSGIGRELGPTGLEEYQETKHI-- 470
Query: 443 RSFFLELEPRYPPW 456
+ L P+ W
Sbjct: 471 ---NINLSPQPIGW 481
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 1e-40
Identities = 102/336 (30%), Positives = 150/336 (44%), Gaps = 15/336 (4%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS-ELAVECASFLAETIPLY-LDCK 165
P GVV + S +NFP+ LA+ + A+A GN V+LKP V +A L
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAG 169
Query: 166 AIKVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI-L 223
+ V GG D E L++ I FTGS VG V AA +HL V+LELGGK I L
Sbjct: 170 VLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVL 229
Query: 224 DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGEN 283
D D+ + G F GQ+C+ LV + A L K +
Sbjct: 230 DD----ADLDLAASNGAWGAFLH-QGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGD 284
Query: 284 PKDSK-SISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPPLDAE 341
P + ++ +IN +R+ ++ D + A A + GG + LF PT+L
Sbjct: 285 PATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGG--TYDGLFYRPTVLSGVKPGMP 342
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
EEIFGP+ P+ ++ +E++ N L+ ++D + +G L N
Sbjct: 343 AFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHIN 402
Query: 402 DTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSH 436
D V PFGG+G SG G R+ G ++E F+
Sbjct: 403 DQTVNDEP-HNPFGGMGASGNGSRFGGPANWEEFTQ 437
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 1e-40
Identities = 123/458 (26%), Positives = 190/458 (41%), Gaps = 43/458 (9%)
Query: 4 AMGEIED---KLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
A ED +A R F + A R L L EL+ N D++ + D GK
Sbjct: 14 AQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGK-- 71
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGE----VVSEPFGVVLICS 116
R L A W ++ P G V EP GVV
Sbjct: 72 --PIRAARRLDVPRAADTFRYYAGWA----DKIEGEVIPVRGPFLNYTVREPVGVVGAIV 125
Query: 117 AWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDV 176
WNFP+ A + A+AAGNTV+LKP+EL A +AE G ++V
Sbjct: 126 PWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAEL------MAEAGFPAGVLNV 179
Query: 177 C--------EQL-LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DT 225
L +KI FTGS VG +M AA +L V+LELGGK I+ D
Sbjct: 180 VTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADA 239
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK 285
D+ V+ G F + GQ+C +LV + +E + + +P
Sbjct: 240 -----DLDAAVRAAATGIFYN-QGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPL 293
Query: 286 DSKS-ISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKEN-LFIEPTILLDPPLDAEI 342
D K+ + ++++ F+R+ + A ++ GG F+EPTI P + I
Sbjct: 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRI 353
Query: 343 MTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
EEIFGP++ ++ + +E++ N LA +T+D ++ + +G++ N
Sbjct: 354 AQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN- 412
Query: 403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ PFGG QSG GR G + + ++ K++
Sbjct: 413 -TYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 2e-40
Identities = 124/450 (27%), Positives = 195/450 (43%), Gaps = 26/450 (5%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV 61
AA ++E +A R+ S R LR +L+++ +++ K D GK
Sbjct: 31 AATPEDVERAIAAARRAQGEWAAMSPMERGRILRRAADLIRERNEELAKLETLDTGKTLQ 90
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFP 121
ET ++ ++ + + L P+ + EP GV + AWN+P
Sbjct: 91 ETIVADMDSGADVFEFFAGLAPA-LNGEIIPLGG---PSFAYTIREPLGVCVGIGAWNYP 146
Query: 122 INLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-IPLYLDCKAIKVTNG-GVDVCEQ 179
+ +A + A+AAGN ++ KPSE A +AE L V G G +V
Sbjct: 147 LQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPL 206
Query: 180 LLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTV 236
L+ K+ FTG G +M+AAA HL VT+ELGGK P I+ D D++ V
Sbjct: 207 LVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMELGGKSPLIVFDDA-----DLESAV 261
Query: 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIIN 295
+ G F S GQVC + V KK + L ++ +P D + + +I+
Sbjct: 262 DGAMLGNFFS-AGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDEATEMGPLIS 320
Query: 296 EYHFERLRKLLKDPLVADA--IVHGGLLDKENL----FIEPTILLDPPLDAEIMTEEIFG 349
H +++ ++ A GG + L F+EPT+ D D I+ EEIFG
Sbjct: 321 AAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFG 380
Query: 350 PILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC 409
P++ ++T ++ E I N LA FT D ++ +G++ N L
Sbjct: 381 PVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWINTY---NLY 437
Query: 410 DV-LPFGGVGQSGIGRYHGHYSFETFSHEK 438
PFGG QSGIGR +G + ++ K
Sbjct: 438 PAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 2e-39
Identities = 101/349 (28%), Positives = 159/349 (45%), Gaps = 19/349 (5%)
Query: 105 VSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-PLYLD 163
V P G V + + WN P L+ + A+A GNTV+LKP+E + A+ LAE L
Sbjct: 132 VRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLP 191
Query: 164 CKAIKVTNG-GVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPA 221
+ +G G + + L+ K + FTG GSI+M A L ++ELGGK P
Sbjct: 192 DGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPV 251
Query: 222 ILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYG 281
I + D++ + ++ F S NG+ C +LV++ A +E L ++
Sbjct: 252 I---VFDDADLERALDAVVFMIF-SFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRV 307
Query: 282 ENPKD-SKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENL--------FIEPT 331
+P D + +I+ H ++ ++ A I+ GG ++ PT
Sbjct: 308 GHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPT 367
Query: 332 ILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391
+ I EEIFGP+L +I + +E+IE N LA Y +T D ++
Sbjct: 368 VFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVAL 427
Query: 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+G + N V+ L PFGGV SGIGR G YSF+ ++ K +
Sbjct: 428 ALEAGMIWVNSQNVRHLPT--PFGGVKASGIGREGGTYSFDFYTETKNV 474
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 4e-39
Identities = 107/358 (29%), Positives = 163/358 (45%), Gaps = 34/358 (9%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163
V +P GVV + S WN P+ L + A+A GNTV++KPSE A+ L E +
Sbjct: 135 AVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVM----- 189
Query: 164 CKAIKVTNG--------GVDVCEQLLQQK--WNKIFFTGSPRVGSIVMSAAAKHLTPVTL 213
A+ V G G D + L + + I FTG R GS +M AAA + PV+
Sbjct: 190 -NAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSF 248
Query: 214 ELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIES 271
ELGGK AI+ D D V I+ F + GQVC+G + + VE+ + +
Sbjct: 249 ELGGKNAAIVFADC-----DFDAAVAGILRSAFLNT-GQVCLGTERVYVERPIFDRFVAA 302
Query: 272 LKTTIKKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVH--GGLLD-----K 323
LK + G + ++ +I+ H +++ + A V GG+ D
Sbjct: 303 LKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALA 362
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
+++PTI P A ++TEEIFGP I ++ +E I N P LA +T+D
Sbjct: 363 GGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDL 422
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
+ ++ G + N ++ L PFGG SGIGR G +S E ++ +
Sbjct: 423 SRAHRVARQMEVGIVWVNSWFLRDL--RTPFGGSKLSGIGREGGVHSLEFYTELTNVC 478
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 6e-38
Identities = 127/465 (27%), Positives = 206/465 (44%), Gaps = 58/465 (12%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKN-QLRA--LIEL---LQDNEDKIFKALHQDLGKHP 60
E E +A R+ F W + +LRA L+EL + N +++ + L + GK
Sbjct: 20 EAEAAIAAARRAFDET-----DWAHDPRLRARVLLELADAFEANAERLARLLALENGKIL 74
Query: 61 VETYRDEIGLIKKSAKY----ALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICS 116
E R EI +Y A + + + P+ L V+ EP GV I
Sbjct: 75 GEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL--------VLREPMGVAGIIV 125
Query: 117 AWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK------VT 170
WN P+ L + L A+AAG TV++KP A + A A I + + ++ T
Sbjct: 126 PWNSPVVLLVRSLAPALAAGCTVVVKP---AGQTAQINAAIIRILAEIPSLPAGVVNLFT 182
Query: 171 NGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI------L 223
G + L+ + I FTGS G +M+AAA L + LELGGK P I L
Sbjct: 183 ESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDDADL 242
Query: 224 DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGEN 283
D L+ +T+ FA GQ C+ +LV++ A + + L +
Sbjct: 243 DAALPKLERALTI-------FA---GQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGP 292
Query: 284 PKDSKS-ISRIINEYHFERLRKLLKDPLV--ADAIVHGGLLDKE---NLFIEPTILLDPP 337
D S + +I+ + +R+ ++++ + A+ ++ GG + + F+ PT+L
Sbjct: 293 GLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDD 352
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
DA+I+ EEIFGP+L + T ++ E++ N LA +T+D ++ +G+
Sbjct: 353 PDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGT 412
Query: 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
+ ND +L GG QSG+GR HG + E F K I
Sbjct: 413 VWINDW--NKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 1e-37
Identities = 112/358 (31%), Positives = 176/358 (49%), Gaps = 32/358 (8%)
Query: 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELA-VECASFLAETIPL 160
G V+ EP GVV + + WN+P+ +A + A+AAG T +LKPSELA V C LA+
Sbjct: 145 GYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLE-LADI--- 200
Query: 161 YLDCKAIK--------VTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVMSAAAKHLTPV 211
C+ + VT G + L +KI FTGS G +M+AAA+ + PV
Sbjct: 201 ---CREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPV 257
Query: 212 TLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIES 271
+LELGGK P I + +D+ V+ + G F + NGQ+C +LV ++ A+ +E
Sbjct: 258 SLELGGKSPII---VFDDVDLDKAVEWAMFGCFWT-NGQICSATSRLLVHERIASEFLEK 313
Query: 272 LKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLD---KEN 325
L K +P + + + +++E +E++ K + A I+ GG K+
Sbjct: 314 LVKWAKNIKISDPLEEGCR-LGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKG 372
Query: 326 LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETF 385
FIEPTI+ D +I EE+FGP+L + T + E+IE N LA + D
Sbjct: 373 FFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLER 432
Query: 386 KKQIVSGTSSGSLIFNDTLVQQLC-DVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
+++ +G + N Q C P+GG+ +SG GR G + E + K + +
Sbjct: 433 CERVSEAFQAGIVWIN---CSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTK 487
|
Length = 503 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 2e-37
Identities = 116/446 (26%), Positives = 189/446 (42%), Gaps = 68/446 (15%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R L ELL+ ++++ + + +++GK E D + A+ + A +
Sbjct: 61 RAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGD--------VQEAIDMAQ-YAAGE 111
Query: 90 KRRLPLLFFPASGEVV-SE-----------PFGVVLICSAWNFPINLALEPLIGAIAAGN 137
RRL GE V SE P GVV + + WNFP+ + + A+ GN
Sbjct: 112 GRRL-------FGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGN 164
Query: 138 TVMLKPSELAVECASFLAET-----IPLYLDCKAIKVTNGGVDVCEQLLQQ-KWNKIFFT 191
TV+ KP+E CA L E +P V G +V E L++ + + FT
Sbjct: 165 TVVFKPAEDTPACALKLVELFAEAGLP---PGVVNVVHGRGEEVGEALVEHPDVDVVSFT 221
Query: 192 GSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQV 251
GS VG + A+ V LE+GGK P I+ + LD+ ++ + F + GQ
Sbjct: 222 GSTEVGERIGETCARPNKRVALEMGGKNPIIV-MDDADLDL--ALEGALWSAFGT-TGQR 277
Query: 252 CVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERL-------- 302
C ++V + ++ K+ + D ++ + +INE E++
Sbjct: 278 CTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGK 337
Query: 303 ---RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN 359
LL GG F+EPT+ D D I EEIFGP++ +I +++
Sbjct: 338 EEGATLLLGGERLT---GGGYEK--GYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS 392
Query: 360 IQESIEFINSRPKPL--AIYA--FTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFG 415
++E+IE N L AIY K ++ + +G + + V LPFG
Sbjct: 393 LEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVH-----LPFG 447
Query: 416 GVGQSGIG-RYHGHYSFETFSHEKAI 440
GV +SG G R G + + F+ KA+
Sbjct: 448 GVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 3e-37
Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 40/360 (11%)
Query: 103 EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI---- 158
E EP GVV + + WNFPI + + A+A GNTV+ KP+EL A L E +
Sbjct: 130 ETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAG 189
Query: 159 -P---LYLDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTL 213
P L V G +V + L++ + + FTGS VG + +AAA V L
Sbjct: 190 LPAGVFNL------VMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQL 243
Query: 214 ELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEK----KFAATLI 269
E+GGK P ++ D+ + V+ + G F S GQ C ++V + +F L+
Sbjct: 244 EMGGKNPLVVL---DDADLDLAVECAVQGAFFS-TGQRCTASSRLIVTEGIHDRFVEALV 299
Query: 270 ESLKTTIKKFYGENPKDSKSISRIINEYHFER-LRKLLKDPLVADAIVHGG-LLDKEN-- 325
E K +K G+ + I +++E E+ LR + +V+GG L + +
Sbjct: 300 ERTKA-LK--VGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEG 356
Query: 326 LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD--- 382
++ P + D I EEIFGP+ +I + + E++ N L+ T
Sbjct: 357 YYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKH 416
Query: 383 -ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAI 440
FK+++ +G +L +PFGG S G R G + E ++ K +
Sbjct: 417 ATHFKRRVEAGVVMVNLPTAGVDYH-----VPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 2e-36
Identities = 130/481 (27%), Positives = 198/481 (41%), Gaps = 83/481 (17%)
Query: 9 EDKLAELRQTFRSGITKSVA-----------WRKNQ-------LRALIELLQDNEDKIFK 50
+K+ E+++ ++ + K+V WR L L +L++ + +
Sbjct: 32 GEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLAS 91
Query: 51 ALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS---- 106
D GK ++Y ++ K +Y DK P G+ +
Sbjct: 92 LETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHG--------KTIPMDGDFFTYTRH 143
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAET----- 157
EP GV WNFP+ +A L A+A GNTV+LKP+E A+ AS + E
Sbjct: 144 EPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPG 203
Query: 158 ----IPLY-LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPV 211
+P Y A ++ +D K+ FTGS VG ++ AA K +L V
Sbjct: 204 VVNVVPGYGPTAGAAISSHPDID-----------KVAFTGSTEVGKLIQQAAGKSNLKRV 252
Query: 212 TLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEK----KFA 265
TLELGGK P I+ D D+ V++ F + GQ C V++ +F
Sbjct: 253 TLELGGKSPNIVFADA-----DLDYAVEQAHEALFFN-MGQCCCAGSRTFVQESIYDEFV 306
Query: 266 ATLIESLKTTIKKFYGENPKDSKSIS-RIINEYHFERLRKLLKDPLV--ADAIVHGGLLD 322
+E K K+ G NP D K+ I+E F+++ +L++ A G
Sbjct: 307 KRSVERAK---KRVVG-NPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHG 362
Query: 323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382
+ FI+PT+ D D I EEIFGP+ I I E IE N+ LA FTKD
Sbjct: 363 DKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKD 422
Query: 383 ETFKKQIVSGTSSGSL---IFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439
+ +G++ +N Q PFGG SG GR G Y + ++ K
Sbjct: 423 IDKAITFSNALRAGTVWVNCYNVVSPQA-----PFGGYKMSGNGRELGEYGLQEYTEVKT 477
Query: 440 I 440
+
Sbjct: 478 V 478
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 7e-36
Identities = 98/372 (26%), Positives = 153/372 (41%), Gaps = 41/372 (11%)
Query: 99 PASGE---VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLA 155
GE V P GV + S WNFP+ + A+ GNTV+LKP+E A+ L
Sbjct: 154 MVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLV 213
Query: 156 ETIPLYLDCKAIK-----VTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAK--- 206
E + + + G +V + L++ I FTGS VG + AAK
Sbjct: 214 EIL---EEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQP 270
Query: 207 ---HLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC---NGQVCVGVDYILV 260
L V E+GGK I+D + LD G S GQ C ++V
Sbjct: 271 GQKWLKRVIAEMGGKNAIIVDE-DADLDEAAE------GIVRSAFGFQGQKCSACSRVIV 323
Query: 261 EKKFAATLIESLKTTIKKFYGENPKDSK-SISRIINEYHFERLRKLLKDPLVADAIVHGG 319
+ +E L K +P+D + + +I++ +R+R+ ++ ++ GG
Sbjct: 324 HESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGG 383
Query: 320 LLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI 376
+ E F++PTI D P D + EEIFGP+L +I + E++E N L
Sbjct: 384 EVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTG 443
Query: 377 YAFTKD----ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSF 431
F++ E +++ G+L N + L PFGG SG G + G
Sbjct: 444 GVFSRSPEHLERARREFE----VGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYL 499
Query: 432 ETFSHEKAIMQR 443
F K + +
Sbjct: 500 LQFMQPKTVTEN 511
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 1e-35
Identities = 92/359 (25%), Positives = 146/359 (40%), Gaps = 26/359 (7%)
Query: 99 PASGEVVS----EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFL 154
P G + EP+GVV A+N P+ A + +AAGNTV++KP E A A L
Sbjct: 103 PVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRL 162
Query: 155 AETIPLYLDCKAIKVTNGGVDVCEQLL--QQKWNKIFFTGSPRVGSIVMSAAAKHLTPVT 212
AE L + G L +I GS G +M AAA+ + VT
Sbjct: 163 AELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVT 222
Query: 213 LELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIE 270
LELGGK I+ D D + + G + GQ C + V + ++
Sbjct: 223 LELGGKNALIVFPDA-----DPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLA 277
Query: 271 SLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGG------LL 321
+ + +P D + + +++ ++R+ + D + +V GG L
Sbjct: 278 RVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYI-DSAKREGARLVTGGGRPEGPAL 336
Query: 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTK 381
+ ++EPT+ D I EEIFGP+L ++ + E + N L +T
Sbjct: 337 EG-GFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTN 395
Query: 382 DETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
D + + +G + N + L PFGGV SGIGR +++ EK +
Sbjct: 396 DISQAHRTARRVEAGYVWINGSSRHFLG--APFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 1e-34
Identities = 120/445 (26%), Positives = 194/445 (43%), Gaps = 43/445 (9%)
Query: 13 AELRQTFRSGITKSVAWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
E R + AWR N LR L+ +++D + + + + GK P+ +
Sbjct: 48 DETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGK-PLAEAK 106
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNF 120
EI YA S ++ W A + +R+ P V+ +P GV + WNF
Sbjct: 107 GEIS-------YAASFIE-WFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNF 158
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IPLYLDCKAI--KVTNGG 173
P + A+AAG T++LKP+ A LAE IP + VT
Sbjct: 159 PAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIP-----AGVFNVVTGSA 213
Query: 174 VDVCEQLLQQKW-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDI 232
V +L K+ FTGS +G +M AK + V+LELGG P I+ D+
Sbjct: 214 GAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIV---FDDADL 270
Query: 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY-GENPKDSKSIS 291
V+ + KF + GQ CV + + V+ E L+ + K + G+ + +I
Sbjct: 271 DKAVEGALASKFRN-AGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIG 329
Query: 292 RIINEYHFERLRKLLKDPLVADA-IVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFG 349
+I+E ++ + + D L A +V GG + F +PTIL+D P +A++ EE FG
Sbjct: 330 PLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFG 389
Query: 350 PILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC 409
P+ P+ + + I N LA Y + +D + ++ G + N ++
Sbjct: 390 PLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISN-- 447
Query: 410 DVLPFGGVGQSGIGRYHGHYSFETF 434
+V PFGG+ SG+GR Y E +
Sbjct: 448 EVAPFGGIKASGLGREGSKYGIEDY 472
|
Length = 482 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 1e-33
Identities = 97/368 (26%), Positives = 152/368 (41%), Gaps = 62/368 (16%)
Query: 108 PFGVVLICSAWNFPI-----NLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAETI 158
P GVV + +A+NFP+ N A+ A+ GNTV+ KPSE A+ LAE +
Sbjct: 133 PLGVVGVITAFNFPVAVPGWNAAI-----ALVCGNTVVWKPSETTPLTAIAVTKILAEVL 187
Query: 159 PLY-LDCKAIKVTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELG 216
L + + GG D E L+ + FTGS VG V A+ V LELG
Sbjct: 188 EKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELG 247
Query: 217 GKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
G I+ + D+ + V+ ++ + GQ C ++V + +E L
Sbjct: 248 GNNAIIVMDDA---DLDLAVRAVLFAAVGTA-GQRCTTTRRLIVHESVYDEFLERLVKAY 303
Query: 277 KKFYGENPKDSKS-ISRIINEYHFERL-----------RKLLKDPLVADAIVHGGLLDKE 324
K+ +P D + + +IN+ E+ +L D G
Sbjct: 304 KQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPG------ 357
Query: 325 NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD-- 382
++EPTI+ DA I+ EE F PIL +I ++++E+I N P+ L+ FT+D
Sbjct: 358 -NYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416
Query: 383 ETFKKQIVSGTSSGSLIFNDTLVQQLCDV----------LPFGGVGQSGIGRYHGHYSFE 432
E F+ G+ G I N V FGG ++G GR G +++
Sbjct: 417 EAFRWLGPKGSDCG--IVN---------VNIPTSGAEIGGAFGGEKETGGGRESGSDAWK 465
Query: 433 TFSHEKAI 440
+
Sbjct: 466 QYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 96/354 (27%), Positives = 160/354 (45%), Gaps = 39/354 (11%)
Query: 34 LRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRL 93
LR + +++ +I + ++ GK + E+ +A Y +D +MA RR
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGK-IQQLAEVEVAF---TADY----ID-YMAEWARRY 51
Query: 94 PLLFFPASGEVVS------------EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVML 141
GE++ GV WNFP L + A+ GNT+++
Sbjct: 52 -------EGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVI 104
Query: 142 KPSELAVECASFLAETIPLYLDCKAI--KVTNGGVDVCEQLL-QQKWNKIFFTGSPRVGS 198
KPSE A A+ + K + V G V ++L K + TGS G
Sbjct: 105 KPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGE 164
Query: 199 IVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYI 258
+M+AAAK++T V LELGGK PAI+ D+ + VK I+ + + +GQVC + +
Sbjct: 165 KIMAAAAKNITKVCLELGGKAPAIV---MDDADLDLAVKAIVDSRVIN-SGQVCNCAERV 220
Query: 259 LVEKKFAATLIESLKTTIKKFYGENPKDSKSISR--IINEYHFERLRKLLKDPLVADA-I 315
V+K + L ++ NP + I+ +IN ER+ + + + A +
Sbjct: 221 YVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARV 280
Query: 316 VHGG-LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFIN 368
GG ++ + + PT+LLD + IM EE FGP+LP++ + ++E+I N
Sbjct: 281 ALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMAN 334
|
Length = 409 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 5e-33
Identities = 116/459 (25%), Positives = 195/459 (42%), Gaps = 56/459 (12%)
Query: 9 EDKLAELRQT---FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
E+ L E +RS +T+ R L LL+ ++ + + + G +T R
Sbjct: 20 EEALREALALAASYRSTLTRYQ--RSAILNKAAALLEARREEFARLITLESGLCLKDT-R 76
Query: 66 DEIGLIKKSAKYA-----------LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLI 114
E+G ++A SC A K R + EP GVVL
Sbjct: 77 YEVGRAADVLRFAAAEALRDDGESFSCDLT--ANGKARK--------IFTLREPLGVVLA 126
Query: 115 CSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK-----V 169
+ +N P+N + AIAA N ++LKPSE A +LA+ L + V
Sbjct: 127 ITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLAD---LLYEAGLPPDMLSVV 183
Query: 170 TNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLS 227
T ++ ++L+ + + FTG VG + + A K LELGG P I+
Sbjct: 184 TGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQL---LELGGNDPLIV---M 237
Query: 228 SPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESL-KTTIKKFYGENPKD 286
D++ + G +A+ +GQ C V ILV + A ++ L + + G+
Sbjct: 238 DDADLERAATLAVAGSYAN-SGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDP 296
Query: 287 SKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL----DKENLFIEPTILLDPPLDAEI 342
+ + +I+E ++ V +AI G + ++ PT+L P DAE+
Sbjct: 297 ATDMGTVIDEEAAIQIENR-----VEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAEL 351
Query: 343 MTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
+TEE FGP+ P+I + ++ E+I NS L+ T D K++V G++ N+
Sbjct: 352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNE 411
Query: 403 TLVQQLCDVLPFGGVGQSGIGRYHG-HYSFETFSHEKAI 440
+ ++ PFGGV SG+G G + + ++ K
Sbjct: 412 VPGFRS-ELSPFGGVKDSGLGGKEGVREAMKEMTNVKTY 449
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 5e-33
Identities = 109/343 (31%), Positives = 169/343 (49%), Gaps = 21/343 (6%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKP-SELAVECASFLAETIPLYLD-- 163
EP GVV+ SA+N P+NL + + AIAAG V++KP + C +F+ L
Sbjct: 123 EPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEG 182
Query: 164 -CKAIKVTNGGVDVCEQLLQQKWNKIF-FTGSPRVGSIVMSAAAKHLTPVTLELGGKCPA 221
C+A+ N V E+L+ F F GS RVG ++ S A T LE GG P
Sbjct: 183 WCQAVPCEN---AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPV 238
Query: 222 ILDTLSSPLD--IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF 279
I+D S+ LD I VK GG + + GQVCV V + V + A + L +K
Sbjct: 239 IVDR-SADLDAMIPPLVK---GGFYHA--GQVCVSVQRVFVPAEIADDFAQRLAAAAEKL 292
Query: 280 YGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPP 337
+P D + + +I +R+ + + + + A A ++ GG + + PT+LLDPP
Sbjct: 293 VVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY-APTVLLDPP 351
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
DA++ T+EIFGP++ + + +++ E+I NS P FTKD + V + +
Sbjct: 352 RDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATA 411
Query: 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
++ ND ++ D +PF G QSG G Y+ + EK
Sbjct: 412 VMVNDHTAFRV-DWMPFAGRRQSGYGTGGIPYTMHDMTQEKMA 453
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 2e-32
Identities = 104/373 (27%), Positives = 166/373 (44%), Gaps = 52/373 (13%)
Query: 99 PASGE--------VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSEL---- 146
A+GE + +P GVV + WN+P+ +A L A+AAGNTV+LKPSE+
Sbjct: 121 KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLT 180
Query: 147 AVECASFLAETIP---LYLDCKAIKVTNGGVDVCEQLL-QQKWNKIFFTGSPRVGSIVMS 202
A++ A A+ +P L + VT G V + L+ K + TGS G V+S
Sbjct: 181 ALKLAELAADILPPGVLNV------VTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLS 234
Query: 203 AAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCN-GQVCVGVDYIL 259
AAA + LELGGK P I+ D D+ V+ I + N GQ C I
Sbjct: 235 AAADSVKRTHLELGGKAPVIVFDDA-----DLDAVVEGIRTFGY--YNAGQDCTAACRIY 287
Query: 260 VEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA---- 314
++ L+ L + +P D + + +I+ H +R+ V A
Sbjct: 288 AQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAG-----FVERAKALG 342
Query: 315 ---IVHGG-LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR 370
+V GG D + + EPT+L D EI+ E+FGP++ + ++ +++ + N
Sbjct: 343 HIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDS 402
Query: 371 PKPLAIYAFTKDETFKKQIVSGTSSGSLIFND--TLVQQLCDVLPFGGVGQSGIGRYHGH 428
LA +T+D ++ + G N LV + +P GG QSG G+
Sbjct: 403 DYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSE----MPHGGQKQSGYGKDMSL 458
Query: 429 YSFETFSHEKAIM 441
Y E ++ + +M
Sbjct: 459 YGLEDYTVVRHVM 471
|
Length = 475 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 6e-32
Identities = 104/374 (27%), Positives = 161/374 (43%), Gaps = 59/374 (15%)
Query: 84 KWMAPKKRR--LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVML 141
K +AP++R LP+L + +P GVV + S WN+P+ LA+ I A+ AGN V+L
Sbjct: 131 KLLAPRRRAGALPVL---TKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVL 187
Query: 142 KPSELAVECASFLAETIPLY---LDCKAIKVTNG-GVDVCEQLLQQKWNKIFFTGSPRVG 197
KP A E LY L +V G G V L+ + + FTGS G
Sbjct: 188 KPDSQTPLTALAAVEL--LYEAGLPRDLWQVVTGPGPVVGTALVDNA-DYLMFTGSTATG 244
Query: 198 SIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGV 255
++ A + L +LELGGK P I+ D D+ + F++ GQ+C+ +
Sbjct: 245 RVLAEQAGRRLIGFSLELGGKNPMIVLDDA-----DLDKAAAGAVRACFSN-AGQLCISI 298
Query: 256 DYILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADA 314
+ I V + + + ++ G S + +I+E E + V DA
Sbjct: 299 ERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSA-----HVDDA 353
Query: 315 IVHGGLL--------DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
+ G + D LF EPT+L D E+ EE FGP++ + + ++ E++E
Sbjct: 354 VAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVER 413
Query: 367 INSRPKPLAIYAFTKD----ETFKKQIVSGT---------SSGSLIFNDTLVQQLCDVLP 413
N P L +T D +I +GT + GS+ D P
Sbjct: 414 ANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSV---DA---------P 461
Query: 414 FGGVGQSGIGRYHG 427
GG+ SG+GR HG
Sbjct: 462 MGGMKDSGLGRRHG 475
|
Length = 524 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 2e-31
Identities = 117/447 (26%), Positives = 201/447 (44%), Gaps = 28/447 (6%)
Query: 7 EIEDKLAELRQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
+I+ ++ R F G S A RK L L +L++ + +++ D GK +
Sbjct: 58 DIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSL 117
Query: 65 RDEIGLIKKSAKYALSCLDKW---MAPKKRRLPLLFFPASGE---VVSEPFGVVLICSAW 118
RD+I ++ ++ +DK +A +S E +V EP GV+ W
Sbjct: 118 RDDIPGAARAIRWYAEAIDKVYGEVATT----------SSHELAMIVREPVGVIAAIVPW 167
Query: 119 NFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNG-GVDV 176
NFP+ L L A+AAGN+V+LKPSE + A LA L + V G G +
Sbjct: 168 NFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEA 227
Query: 177 CEQL-LQQKWNKIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234
+ L + I FTGS R G ++ A ++ V LE GGK I+ + D++
Sbjct: 228 GQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV--FADCPDLQQ 285
Query: 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKD-SKSISRI 293
G F + GQVC+ +L+E+ A + LK + + +P D + ++ +
Sbjct: 286 AASATAAGIFYN-QGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTL 344
Query: 294 INEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP 353
I+ H + + +++ ++ G I PTI +D +A + EEIFGP+L
Sbjct: 345 IDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLV 404
Query: 354 IITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLP 413
+ + +++++ N L +T+D + ++ +GS+ N+ + +P
Sbjct: 405 VTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDM--TVP 462
Query: 414 FGGVGQSGIGRYHGHYSFETFSHEKAI 440
FGG QSG GR ++ E F+ K I
Sbjct: 463 FGGYKQSGNGRDKSLHALEKFTELKTI 489
|
Length = 494 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 4e-31
Identities = 108/359 (30%), Positives = 158/359 (44%), Gaps = 31/359 (8%)
Query: 99 PASGEVVSEPFGVVLICSAWNFP--INLA-LEPLIGAIAAGNTVMLKPSELAVECASFLA 155
P + E GVV + WNFP INLA L P A+AAGNTV+LKP+ CA+ L
Sbjct: 132 PTRRTLRREAVGVVGAITPWNFPHQINLAKLGP---ALAAGNTVVLKPAPDTPWCAAVLG 188
Query: 156 ETIPLYLDCKA----IKVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTP 210
E I + D I VT+ + L + + + + FTGS G VM+ AA L
Sbjct: 189 ELIAEHTDFPPGVVNI-VTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKK 247
Query: 211 VTLELGGKCPAI-LDTLSSPLDIKVTVKRIIGGKFASC--NGQVCVGVDYILVEKKFAAT 267
V LELGGK I LD D+ F C GQ C ++V +
Sbjct: 248 VFLELGGKSAFIVLDD----ADLAAACSM---AAFTVCMHAGQGCAITTRLVVPRARYDE 300
Query: 268 LIESLKTTIKKFYGENPKDSKSI-SRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKE 324
+ + T+ +P D ++ +I+ +R++ L D VA+ GG +
Sbjct: 301 AVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYL-DLAVAEGGRFACGGGRPAD 359
Query: 325 ---NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTK 381
F+EPT++ +A + EEIFGP+L +I + +++ N P L+ F
Sbjct: 360 RDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGA 419
Query: 382 DETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
D + + +G++ N + PFGG QSGIGR G FE + K I
Sbjct: 420 DPERAAAVAARVRTGTVNVNGGV--WYSADAPFGGYKQSGIGREMGVAGFEEYLETKLI 476
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 7e-31
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 15/334 (4%)
Query: 105 VSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC 164
V P GV ++ S WNFP + + + I GN V+LKP+E A A+ E +
Sbjct: 164 VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLP 223
Query: 165 KAIK--VTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAK------HLTPVTLEL 215
K + V G +V + L+ K + I FTGS VG+ + AAK HL V E+
Sbjct: 224 KGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEM 283
Query: 216 GGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVC-VGVDYILVEKKFAATLIESLKT 274
GGK I+D + DI++ + F GQ C G ++ EK + + ++
Sbjct: 284 GGKDTVIVDEDA---DIELAAQSAFTSAFGF-AGQKCSAGSRAVVHEKVYDEVVERFVEI 339
Query: 275 TIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD-KENLFIEPTIL 333
T G + +I++ F ++ + ++ +V GG D + FI PTI
Sbjct: 340 TESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTIF 399
Query: 334 LDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393
D A + EEIFGP++ I ++ E++E N+ L + + + +
Sbjct: 400 ADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEF 459
Query: 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
G+L FN + + PFGG SG G
Sbjct: 460 EVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAG 493
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-30
Identities = 107/358 (29%), Positives = 158/358 (44%), Gaps = 31/358 (8%)
Query: 99 PASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE----LAVECASFL 154
P + EP GVV WNFP+ + + A+A GNT++LKP+E A+ A
Sbjct: 132 PHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLA 191
Query: 155 AET-IPLYLDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPV 211
AE +P D VT G + +K+ FTGS VG I+M AAK +L PV
Sbjct: 192 AEAGLP---DGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPV 248
Query: 212 TLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIES 271
TLELGGK P I+ D+ V+ F + GQ C V + +E
Sbjct: 249 TLELGGKSPFIV---CEDADVDKAVELAHFALFFN-QGQCCCAGSRTFVHESIYDEFVEK 304
Query: 272 LKTTIKKFYGENPKDSKSISR--IINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLF 327
K K +P K + + +++ FE++ ++ A I G + + +
Sbjct: 305 AKARALKRVVGDPFR-KGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYY 363
Query: 328 IEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK 387
I+PTI D D +I +EIFGP+ I+ + E I+ N+ LA F+K+
Sbjct: 364 IQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTAN 423
Query: 388 QIVSGTSSGSLIFNDTLVQQLC-DVL----PFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ +G++ N C DV PFGG SGIGR G Y+ + KA+
Sbjct: 424 TLSRALKAGTVWVN-------CYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 4e-30
Identities = 104/361 (28%), Positives = 159/361 (44%), Gaps = 51/361 (14%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GV AWN+PI +A A+AAGN ++ KPSE+ A LAE +Y +
Sbjct: 141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAE---IYTEAGL 197
Query: 167 IK----VTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPA 221
V G V L + K+ FTG G VM+AAA L VT+ELGGK P
Sbjct: 198 PDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPL 257
Query: 222 IL--DT-LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK 278
I+ D L DI + F S +GQVC + V+K A L +++
Sbjct: 258 IVFDDADLDRAADIAML------ANFYS-SGQVCTNGTRVFVQKSIKAAFEARLLERVER 310
Query: 279 FYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADAI----------VHGGL-LDKENL 326
+P D + + +++ H ++ V I + GG L +
Sbjct: 311 IRIGDPMDPATNFGPLVSFAHRDK---------VLGYIEKGKAEGARLLCGGERLTEGGF 361
Query: 327 ----FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382
F+ PT+ D D I+ EEIFGP++ ++T ++ E I N LA FT D
Sbjct: 362 ANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTAD 421
Query: 383 ETFKKQIVSGTSSGSL---IFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439
+ +++ +G + ++ + +P GG QSGIGR +G + E ++ K+
Sbjct: 422 LSRAHRVIHQLEAGICWINTWGESPAE-----MPVGGYKQSGIGRENGIATLEHYTQIKS 476
Query: 440 I 440
+
Sbjct: 477 V 477
|
Length = 488 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 3e-28
Identities = 111/460 (24%), Positives = 193/460 (41%), Gaps = 31/460 (6%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE 62
A E E L F++ R L +LL+ ++ L ++GK+ VE
Sbjct: 52 ADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVE 111
Query: 63 ---TYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWN 119
+ I I+ A+ AL + P +P + E G ++ S WN
Sbjct: 112 AIDDVAEAIDFIRYYARAAL----RLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWN 165
Query: 120 FPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI--PLYLDCKAIKVTNG-GVDV 176
FP+ + ++ +A GNTV+ KP+E AV + I ++ G G +V
Sbjct: 166 FPVAIFTGMIVAPVAVGNTVIAKPAEDAV-VVGYKVFEIFHEAGFPPGVVQFLPGVGEEV 224
Query: 177 CEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLT------PVTLELGGKCPAILDTLSSP 229
L + ++ I FTGS G + AAA+ + +E GGK I+D +
Sbjct: 225 GAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETA-- 282
Query: 230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS 289
D ++ V+ ++ F GQ C +++ + ++E L ++ P+++ +
Sbjct: 283 -DFELVVEGVVVSAFGF-QGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGT 340
Query: 290 -ISRIINEYHFERLRKLLKDPLVADAIVHGG-LLDKENLFIEPTILLDPPLDAEIMTEEI 347
+ +I+ ++ ++ +V GG L+ E F+ PT++ + P A I EEI
Sbjct: 341 DLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEI 400
Query: 348 FGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLV 405
FGP+L +I ++ E++E NS P L +++ ++ G+L N +
Sbjct: 401 FGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKIT 460
Query: 406 QQLCDVLPFGGVGQSGIGRYHG--HYSFETFSHEKAIMQR 443
L V PFGG SG G HY F KA+ +R
Sbjct: 461 GALVGVQPFGGFKLSGTNAKTGGPHY-LRRFLEMKAVAER 499
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 4e-28
Identities = 100/342 (29%), Positives = 156/342 (45%), Gaps = 16/342 (4%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-PLYLDCK 165
+P GVV WNFP+ + + A+A GNTV+LKP+E A AE L
Sbjct: 146 KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPG 205
Query: 166 AIKVTNGGVDVCEQL-LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILD 224
+ + G L +K+ FTGS VG + A A ++LELGGK P I+
Sbjct: 206 VLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIV- 264
Query: 225 TLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP 284
+ LD V+ I+ + GQVC +LV++ A LI LK + +P
Sbjct: 265 FDDADLD--SAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDP 321
Query: 285 KD-SKSISRIINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAE 341
D + + I++ +R+R+L+++ A V G L + F PT+ + P +
Sbjct: 322 LDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASR 381
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
I EEIFGP+L ++T +E++ N+ P LA ++++ + ++ +G + N
Sbjct: 382 IAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWIN 441
Query: 402 DTLVQQLCD-VLPFGGVGQSGIGRY---HGHYSFETFSHEKA 439
L D FGG +SG GR G Y + S E A
Sbjct: 442 GH---NLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSWEPA 480
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 4e-28
Identities = 122/440 (27%), Positives = 184/440 (41%), Gaps = 45/440 (10%)
Query: 26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW 85
SVA R N L + + ++ N + + A D GK ET +I L +Y C+
Sbjct: 58 SVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCI--- 114
Query: 86 MAPKKRRLPLLFFPASGEVVS----EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVML 141
R V+ EP GVV WNFP+ +A L A+AAGN V+L
Sbjct: 115 -----RAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVL 169
Query: 142 KPSELAVECASFLAETIPLYLDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSI 199
KP+E L E I L + V NG G++ + L K K+ FTG G +
Sbjct: 170 KPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRL 229
Query: 200 VMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIG-GKFASCNGQVCVGVD 256
+M A++++ PVTLELGGK P I D + + D K + G FA G+VC
Sbjct: 230 IMQYASENIIPVTLELGGKSPNIFFADVMDA--DDAFFDKALEGFVMFALNQGEVCTCPS 287
Query: 257 YILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK--------- 307
L+++ +E +K NP D++++ I + E+L K+L
Sbjct: 288 RALIQESIYDRFMERALERVKAIKQGNPLDTETM--IGAQASLEQLEKILSYIDIGKEEG 345
Query: 308 -DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
+ L G L ++ T I EEIFGP+L + T + +E++E
Sbjct: 346 AEVLTGGERNELGGLLGGGYYVPTTFKGGN--KMRIFQEEIFGPVLAVTTFKDEEEALEI 403
Query: 367 INSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVL-----PFGGVGQSG 421
N L +T+D ++ G +G + N C L FGG QSG
Sbjct: 404 ANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTN-------CYHLYPAHAAFGGYKQSG 456
Query: 422 IGRYHGHYSFETFSHEKAIM 441
IGR + + + K ++
Sbjct: 457 IGRENHKMMLDHYQQTKNLL 476
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 5e-28
Identities = 97/346 (28%), Positives = 155/346 (44%), Gaps = 18/346 (5%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
+P GVV + WN+P+ +A L A+AAGN V+LKPSE+ A LAE
Sbjct: 136 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 195
Query: 167 IKVTNG-GVDVCEQLL-QQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILD 224
+ + G G V + L +K + TGS G ++S A + +ELGGK P I
Sbjct: 196 VNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVI-- 253
Query: 225 TLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP 284
+ DI V+ + F + GQ C I ++ TL+E L + P
Sbjct: 254 -VFDDADIDAVVEGVRTFGFYNA-GQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAP 311
Query: 285 KD-SKSISRIINEYHFERLRKLLKDPLVADAIVH-----GGLLDKEN-LFIEPTILLDPP 337
D S + + + H ER+ K +++ A A+ H GG K N + PT+L
Sbjct: 312 DDESTELGPLSSLAHLERVMKAVEE---AKALGHIKVITGGEKRKGNGYYFAPTLLAGAK 368
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
D I+ +E+FGP++ I + ++ ++ + + N LA +TKD ++ + G
Sbjct: 369 QDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGC 428
Query: 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443
N + L +P GG SG G+ Y E ++ + IM +
Sbjct: 429 TWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 6e-28
Identities = 128/465 (27%), Positives = 199/465 (42%), Gaps = 52/465 (11%)
Query: 4 AMGEIED---KLAELRQTFRSG-ITKSVAW-RKNQLRALIELLQDNEDKIFKALHQDLGK 58
A G+ ED +A R+ F G K A+ R L +LL+ + D++ D GK
Sbjct: 90 AEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGK 149
Query: 59 HPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASG----EVVSEPFGVVLI 114
++ + E+ + + +Y DK L PA G + + EP GV
Sbjct: 150 PYEQSAKAELPMFARLFRYYAGWADKIHG--------LTVPADGPHHVQTLHEPIGVAGQ 201
Query: 115 CSAWNFPINLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAETIPLYLDCKAIKVT 170
WNFP+ + + A+A GNT++LK +E A+ A L E L + V
Sbjct: 202 IIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEA---GLPPGVLNVV 258
Query: 171 NG-----GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILD 224
+G G + + +K+ FTGS G IV+ AAK +L PVTLELGGK P I+
Sbjct: 259 SGFGPTAGAALASHM---DVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIV- 314
Query: 225 TLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKT-TIKKFYGEN 283
D+ V+ F + GQ C V ++ +E K +K+ G+
Sbjct: 315 --CEDADVDKAVELAHFALFFN-QGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDP 371
Query: 284 PKDSKSISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAE 341
K I+ FE++ + +K + + A G + +I+PT+ + D
Sbjct: 372 FKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDML 431
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
I +EIFGP+ I+ ++ E I N+ LA FT++ + G++ N
Sbjct: 432 IAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVN 491
Query: 402 DTLVQQLC-DV----LPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
C DV +PFGG SGIGR G YS + KA++
Sbjct: 492 -------CFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 529
|
Length = 538 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 7e-28
Identities = 101/372 (27%), Positives = 157/372 (42%), Gaps = 73/372 (19%)
Query: 37 LIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKS---AKYALSCLDKWMAPKKRRL 93
+LL++N D++ + + + GK T D G + + ++A S +
Sbjct: 69 FRQLLEENLDELARLITLEHGK----TLADARGDVLRGLEVVEFACS------------I 112
Query: 94 PLLFFPASGEVVS---------EPFGVVLICSAWNFP--INLALEPLIGAIAAGNTVMLK 142
P L E V+ +P GVV + +NFP I L + P+ AIA GNT +LK
Sbjct: 113 PHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPM--AIACGNTFVLK 170
Query: 143 PSELAVECASFLAETIPLYLDCKA------IKVTNGGVDVCEQLLQQKWNK-IFFTGSPR 195
PSE A LAE L +A + V +GG + LL K + F GS
Sbjct: 171 PSERVPGAAMRLAE-----LLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTP 225
Query: 196 VGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCV 253
VG + AA + V G K A++ D D++ T ++G F GQ C+
Sbjct: 226 VGEYIYERAAANGKRVQALGGAKNHAVVMPDA-----DLEQTANALVGAAFG-AAGQRCM 279
Query: 254 GVDYILVEKKFAATLIESLKTTIKKF---YGENPKDSKSISRIINEYHFERLRKLLKDPL 310
+ + A I L KK G++P + +I+ ER+ L
Sbjct: 280 ALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDP--GADMGPVISPAAKERIEGL----- 332
Query: 311 VADAIVHGG--LLDKENL---------FIEPTILLDPPLDAEIMTEEIFGPILPIITLNN 359
+ + G +LD + F+ PTIL + D +I EEIFGP+L I+ ++
Sbjct: 333 IESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDT 392
Query: 360 IQESIEFINSRP 371
+ E+I IN+ P
Sbjct: 393 LDEAIAIINANP 404
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 7e-28
Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 25/353 (7%)
Query: 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161
G + EP GVV WNFP + + A+AAG T+++KP+E A F A
Sbjct: 152 GYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHL---- 207
Query: 162 LDCKAIKVTNGGVDVCEQL---------LQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPV 211
K V +G ++V +K+ FTGS VG +M AAA +L V
Sbjct: 208 --AKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQV 265
Query: 212 TLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIES 271
+LELGGK P ++ D+ + V + G F + G++CV + V++ ++
Sbjct: 266 SLELGGKSPLLI---FDDADVDMAVDLALLGIFYN-KGEICVASSRVYVQEGIYDEFVKK 321
Query: 272 LKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA-IVHGGL-LDKENLFI 328
L K + +P D ++ +++ FE++ ++ A ++ GG + +I
Sbjct: 322 LVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYI 381
Query: 329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388
EPTI D D +I +EIFGP++ ++ ++E+I+ N+ LA TKD
Sbjct: 382 EPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANT 441
Query: 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
+ +G++ N D PFGG SG GR G + + + K+++
Sbjct: 442 VSRSIRAGTIWVNCYFAFDP-DC-PFGGYKMSGFGRDQGMDALDKYLQVKSVV 492
|
Length = 501 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 9e-28
Identities = 97/363 (26%), Positives = 151/363 (41%), Gaps = 34/363 (9%)
Query: 77 YALSCLDKWMAPKKRRLPLLFFPASGEV---VSEPFGVVLICSAWNFPINLALEPLIGAI 133
YA L K K P+ P GE P GV ++ S WNFP + + AI
Sbjct: 144 YARQML-KLADGK----PVESRP--GEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAI 196
Query: 134 AAGNTVMLKPSELAVECASFLAET-----IPLYLDCKAIK--VTNGGVDVCEQLLQQKWN 186
AGNTV+LKP+ A+ E +P + V G +V + L+
Sbjct: 197 VAGNTVLLKPASDTPVIAAKFVEVLEEAGLP-----AGVVNFVPGSGSEVGDYLVDHPKT 251
Query: 187 K-IFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239
+ I FTGS VG + AAK L V E+GGK ++D D+ + + I
Sbjct: 252 RFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVD---EDADLDLAAESI 308
Query: 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHF 299
+ F +GQ C +V + ++E + K+ NP+D+ + +IN+ F
Sbjct: 309 VASAFGF-SGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASF 367
Query: 300 ERLRKLL-KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN 358
+++ + ++ G D + FI+PTI D A IM EEIFGP++ I
Sbjct: 368 DKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427
Query: 359 NIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVG 418
+ ++E N+ L + + ++ G+L FN + PFGG
Sbjct: 428 DFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFN 487
Query: 419 QSG 421
SG
Sbjct: 488 MSG 490
|
Length = 514 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 1e-27
Identities = 118/459 (25%), Positives = 185/459 (40%), Gaps = 58/459 (12%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV 61
A E++ +A FR T + A R A +LL+ D++ + ++GK +
Sbjct: 19 ALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGK-TL 77
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS--------EPFGVVL 113
+ + E K A ++ A L L PA V +P GVVL
Sbjct: 78 ASAKAEA------LKCAKGF--RYYAEHAEAL-LADEPADAAAVGASRAYVRYQPLGVVL 128
Query: 114 ICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-----PLYLDC-KAI 167
WNFP+ + A+ AGN +LK + + A +LA+ P C + +
Sbjct: 129 AVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPD--GCFQTL 186
Query: 168 KVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLS 227
V +G V+ L + TGS G V + A + LELGG P I+ S
Sbjct: 187 LVGSGAVEAI--LRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIV-MPS 243
Query: 228 SPLDIKVTVKRIIGGKFASC--NGQVCVGVDYILVE--------KKFAATLIESLKTTIK 277
+ LD A NGQ C+ +V +KF A + +L+
Sbjct: 244 ADLDRAAETAVT-----ARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARM-AALRV--- 294
Query: 278 KFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLD 335
G+ + + E + + K + D + A A + G D F PT++ D
Sbjct: 295 ---GDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITD 351
Query: 336 PPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395
D + TEE+FGP+ + + +I E+IE N+ L A+T+DE +++ + +
Sbjct: 352 ITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEA 411
Query: 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRY---HGHYSF 431
G + N V LPFGGV +SG GR HG F
Sbjct: 412 GQVFINGMTVSY--PELPFGGVKRSGYGRELSAHGIREF 448
|
Length = 457 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-27
Identities = 101/351 (28%), Positives = 156/351 (44%), Gaps = 31/351 (8%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GV I WN+P+ + + +AAGNTV+LKP+++ A AE L KA
Sbjct: 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAE-----LTVKA 200
Query: 167 ------IKVTNGGVDVCEQLLQQKWN--KIFFTGSPRVGSIVM-SAAAKHLTPVTLELGG 217
I + G + Q L + K+ FTGS +G +M S A +L V+LELGG
Sbjct: 201 GFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGG 260
Query: 218 KCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIK 277
K P I + + D+ V+ + F + G+ C+ + VE+ + + +K
Sbjct: 261 KSPLI---IFADCDMDKAVRMGMSSVFFN-KGENCIAAGRLFVEESIHDEFVRRVVEEVK 316
Query: 278 KFYGENPKDSKSISRIINEYHFERLRKLLK--DPLVADA--IVHGG-LLDKENLFIEPTI 332
K +P D + N H L KL++ + V + +V+GG +D+ F EPT+
Sbjct: 317 KMKIGDPLDRSTDHGPQN--HKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTV 374
Query: 333 LLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRPKPLAIYAFTKDETFKKQIV 390
D I EE FGPI+ I ++ + ++ N LA FTKD +
Sbjct: 375 FTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVS 434
Query: 391 SGTSSGSLIFNDTLVQQLCDVL-PFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+G++ N DV PFGG QSG G+ G + + K +
Sbjct: 435 DKLEAGTVFVN---TYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 7e-26
Identities = 103/337 (30%), Positives = 151/337 (44%), Gaps = 48/337 (14%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKP-SELAVEC----ASFLAETIPLYL 162
P GVVL +N+P+NLA+ + A+ AGN V+LKP ++ AV F P L
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217
Query: 163 -DCKAIKVTNGGVDVCEQL-LQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGK- 218
C VT G ++ + L + N I FTG G ++ + K + P+ +ELGGK
Sbjct: 218 ISC----VTGKGSEIGDFLTMHPGVNCISFTG----GDTGIAISKKAGMVPLQMELGGKD 269
Query: 219 -CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIK 277
C + D D+ + II G F S +GQ C V +LV + A L+E + +
Sbjct: 270 ACIVLEDA-----DLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKVNAKVA 323
Query: 278 KFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPP 337
K P+D I+ +++E + L+ D A + NL I P +L +
Sbjct: 324 KLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNL-IWPLLLDNVR 382
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD-----------ETFK 386
D I EE FGP+LP+I +N+++E I N+ L FT+D ET
Sbjct: 383 PDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGT 442
Query: 387 KQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG 423
QI S + G D PF G+ SGIG
Sbjct: 443 VQINSAPARGP------------DHFPFQGLKDSGIG 467
|
Length = 496 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 1e-24
Identities = 104/435 (23%), Positives = 180/435 (41%), Gaps = 28/435 (6%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
+++ +A R F S+ R LR ELL+ N++++ + + ++ GK E +
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QT 59
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
E+ + K +S +R P+ A + P GV+ + +NFP +L
Sbjct: 60 EVAAMA--GKIDISIKAYHERTGERATPMAQGRAV--LRHRPHGVMAVFGPFNFPGHLPN 115
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCK----AIKVTNGGVDVCEQLLQ 182
++ A+ AGNTV+ KPSEL A + E L+ + + + GG + E L
Sbjct: 116 GHIVPALLAGNTVVFKPSELTPAVAELMVE---LWEEAGLPPGVLNLVQGGRETGEALAA 172
Query: 183 QKW-NKIFFTGSPRVGSIVMSAAAKHLTP---VTLELGGKCPAILDTLSSPLDIKVTVKR 238
+ + + FTGS G ++ A P + LE+GG P ++ DI
Sbjct: 173 HEGIDGLLFTGSAATGLLLHRQFAGR--PGKILALEMGGNNPLVVW---DVADIDAAAYL 227
Query: 239 IIGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKS-ISRIINE 296
I+ F + GQ C ++V +E L K+ P + +I
Sbjct: 228 IVQSAFLTA-GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIA 286
Query: 297 YHFERLRKLLKDPLV--ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPI 354
R +D L + ++ L F+ P I +D A++ EEIFGP+L +
Sbjct: 287 AAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGI-IDVTDAADVPDEEIFGPLLQV 345
Query: 355 ITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPF 414
++ E+I N+ L+ + DE ++ ++ +G + +N PF
Sbjct: 346 YRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASST-APF 404
Query: 415 GGVGQSGIGRYHGHY 429
GGVG SG R +Y
Sbjct: 405 GGVGLSGNHRPSAYY 419
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 5e-24
Identities = 109/454 (24%), Positives = 193/454 (42%), Gaps = 50/454 (11%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE 62
A +IE+ L FR ++ +R +LR + + L+ +++ + + +++GK P+
Sbjct: 26 AGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGK-PIN 84
Query: 63 TYRDEIGLIKKSAKYALSCLDKWMAPKKRRL----PLLFFPASGEVVSEPFGVVLICSAW 118
R E+ AK A C W A + P L + P G +L W
Sbjct: 85 QARAEV------AKSANLC--DWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPW 136
Query: 119 NFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IP--LYLDCKAIKVTN 171
NFP+ + + + AGN +LK + + CA +A+ IP +Y + N
Sbjct: 137 NFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVY---GWLNADN 193
Query: 172 GGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLD 231
GV + + + + TGS R G+ + + A L LELGG P I + + D
Sbjct: 194 DGVS--QMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI---VLNDAD 248
Query: 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-- 289
+++ VK + G++ + GQVC ++E+ A+ E +P+D ++
Sbjct: 249 LELAVKAAVAGRYQN-TGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENAL 307
Query: 290 --ISR--IINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTE 345
++R + +E H ++ L + A ++ G + + PT+L + + E
Sbjct: 308 GPMARFDLRDELH-HQVEATLAEG--ARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFRE 364
Query: 346 EIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN---- 401
E+FGP+ I + + ++E N L+ FT DET +Q+ + G + N
Sbjct: 365 ELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCA 424
Query: 402 -DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
D V FGGV +SG GR H+ F
Sbjct: 425 SDARVA-------FGGVKKSGFGRELSHFGLHEF 451
|
Length = 462 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 7e-24
Identities = 102/441 (23%), Positives = 184/441 (41%), Gaps = 59/441 (13%)
Query: 12 LAELRQTFRSGITKSVAW-------RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY 64
LA ++ S W R +L L +LL+ + ++ ++ GK T
Sbjct: 73 LAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGK----TI 128
Query: 65 RDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINL 124
+ I ++++ + ++ A + R GE E GV + S WNFP+ +
Sbjct: 129 HNAIAEVREAVDFC-----RYYAKQVRD-------VLGEFSVESRGVFVCISPWNFPLAI 176
Query: 125 ALEPLIGAIAAGNTVMLKPSE----LAVECASFLAET-IPLYLDCKAIKVTNG-GVDVCE 178
+ A+AAGNTV+ KP+E +A + E P I++ G G DV
Sbjct: 177 FTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFP----AGTIQLLPGRGADVGA 232
Query: 179 QLL-QQKWNKIFFTGSPRVGSIVMSAAAKHL-TPVTL--ELGGKCPAILDTLSSPLDIKV 234
L + + FTGS V ++ A+ PV L E GG+ I+D S+ L +V
Sbjct: 233 ALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVD--STALPEQV 290
Query: 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK--------- 285
V+ ++ F S GQ C + + V++ A ++ ++ +++ P
Sbjct: 291 -VRDVLRSAFDSA-GQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPV 348
Query: 286 -DSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMT 344
D+++ ++ H E + + K +A + + F+ PT+ + ++
Sbjct: 349 IDAEAKQNLLA--HIEHMSQTQKK--IAQLTLDDSRACQHGTFVAPTLFELDDIAE--LS 402
Query: 345 EEIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
EE+FGP+L ++ + + ++ IN L + ++ ET + I G+ N
Sbjct: 403 EEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNR 462
Query: 403 TLVQQLCDVLPFGGVGQSGIG 423
V + V PFGG G SG G
Sbjct: 463 NQVGAVVGVQPFGGQGLSGTG 483
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 24/289 (8%)
Query: 108 PFGVVLICSAWNFPI-----NLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAETI 158
P GVV + +A+NFP+ N A+ A+ GN V+ KPS A+ +A +
Sbjct: 132 PLGVVGVITAFNFPVAVWGWNAAI-----ALVCGNVVVWKPSPTTPLTAIAVTKIVARVL 186
Query: 159 PLYLDCKAI-KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELG 216
AI + GG DV E L++ + + FTGS VG V A A LELG
Sbjct: 187 EKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELG 246
Query: 217 GKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
G I+ + D+ + V+ ++ + GQ C ++V + ++E LK
Sbjct: 247 GNNAIIVMEDA---DLDLAVRAVLFAAVGTA-GQRCTTTRRLIVHESIYDEVLERLKKAY 302
Query: 277 KKFYGENPKDSKSI-SRIINEYHFERLRKLLKDPLVADAIVHGG--LLDKENLFIEPTIL 333
K+ +P D ++ + + + +++ V G ++D ++EPTI+
Sbjct: 303 KQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIV 362
Query: 334 LDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382
+ DA I+ EE F PIL ++ + ++E+I + N P+ L+ FT D
Sbjct: 363 -EGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD 410
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 2e-19
Identities = 91/343 (26%), Positives = 150/343 (43%), Gaps = 34/343 (9%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC-- 164
GV + S WNFP+ + + A+AAGNTV+ KP+E A+ E L +
Sbjct: 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVE---LLHEAGV 222
Query: 165 --KAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGG 217
+++ G G ++ E L+ + + FTGS ++ A A+ + P+ E GG
Sbjct: 223 PRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGG 282
Query: 218 KCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIK 277
K I+D+ + + VK ++ F S GQ C + + ++++ A IE LK +
Sbjct: 283 KNAMIVDSTA---LPEQAVKDVVQSAFGSA-GQRCSALRLLYLQEEIAERFIEMLKGAMA 338
Query: 278 KFYGENPKDSKS-ISRIINEYHFERLRKL-LKDPLVADAIVHGGLLDKENLFIEPTILLD 335
+P D + + +I++ + LR A I L D F+ P I+
Sbjct: 339 SLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEI 398
Query: 336 PPLDAEIMTEEIFGPILPIIT--LNNIQESIEFINSRPKPLAIYAFT-----KDETFKKQ 388
+ +T E+FGPIL +I ++ E+IE IN+ Y T +DE +
Sbjct: 399 VGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATG-----YGLTLGIHSRDEREIEY 451
Query: 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG--HY 429
+G+L N + + PFGG G SG G G +Y
Sbjct: 452 WRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNY 494
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 3e-19
Identities = 99/408 (24%), Positives = 179/408 (43%), Gaps = 56/408 (13%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE 62
A++ E++ +A R+TF + S+A R + L LL+++ D+I + + + GK
Sbjct: 35 ASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGK---- 90
Query: 63 TYRDEIGLIKKSAKYA-LSC------LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLIC 115
T+ D +G + + + +C + R+ + + +P GV
Sbjct: 91 THSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDV-------YSIRQPLGVCAGI 143
Query: 116 SAWNFP--INLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA----IKV 169
+ +NFP I L + P+ AIA GNT +LKPSE A LAE L+ + A + V
Sbjct: 144 TPFNFPAMIPLWMFPI--AIACGNTFVLKPSEKVPSAAVKLAE---LFSEAGAPDGVLNV 198
Query: 170 TNGGVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSS 228
+G + ++LL+ K + F GS +G + + + H V G K ++
Sbjct: 199 VHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVV---MP 255
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDY-ILV--EKKFAATLIESLKTTIKKFYGENPK 285
D ++G + + GQ C+ + +LV ++ + E + I+ G++P
Sbjct: 256 DADKDAAADALVGAAYGAA-GQRCMAISAAVLVGAADEWVPEIRERAEK-IRIGPGDDP- 312
Query: 286 DSKSISRIINEYHFERLRKLLKDPLVADAIVHGG--LLD---------KENLFIEPTILL 334
+ +I +R+ L +A G LLD +E ++ PT+L
Sbjct: 313 -GAEMGPLITPQAKDRVASL-----IAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLE 366
Query: 335 DPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382
P + EEIFGP+L ++ + ++E+I IN+ P FT+D
Sbjct: 367 RVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRD 414
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 2e-18
Identities = 90/343 (26%), Positives = 153/343 (44%), Gaps = 36/343 (10%)
Query: 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161
G + P G V+ S WNFP+ + + A+AAGN+V+ KP+E + A+ + L
Sbjct: 230 GNLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAE---QTPLIAAQAVRLL 286
Query: 162 ----LDCKAIKVTNG-GVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSA-AAKHLTPVTL- 213
+ +++ G G V L + + FTGS V ++ A + P+ L
Sbjct: 287 HEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLI 346
Query: 214 -ELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESL 272
E GG+ I+D SS L +V V ++ F S GQ C + + +++ A ++ L
Sbjct: 347 AETGGQNAMIVD--SSALAEQV-VADVLASAFDSA-GQRCSALRVLCLQEDVADRILTML 402
Query: 273 KTTIKKFYGENPK----------DSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD 322
K + + NP D+++ + I E H + +R + LV A L
Sbjct: 403 KGAMAELRVGNPDRLTTDVGPVIDAEAKANI--EKHIQTMRSKGR--LVHQAAAPNSLQK 458
Query: 323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFT 380
F+ PT++ LD + E+FGP+L ++ + + E I+ IN+ L + T
Sbjct: 459 --GTFVAPTLIELENLDE--LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHT 514
Query: 381 KDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG 423
+ + + +G+L N +V + V PFGG G SG G
Sbjct: 515 RIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 6e-17
Identities = 87/342 (25%), Positives = 145/342 (42%), Gaps = 41/342 (11%)
Query: 105 VSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI----- 158
EP GV+ + +N P+N + AIA N +++KPSE A +LA+ +
Sbjct: 135 QREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGL 194
Query: 159 -PLYLDCKAIKVTNGGVDVCEQLL-QQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELG 216
P L VT ++ ++L+ + + FTG +G + AA LELG
Sbjct: 195 PPQMLQV----VTGDPREIADELITNPHVDLVTFTGGVAIGKYI--AARAGYRRQVLELG 248
Query: 217 GKCPAIL---DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLK 273
G P I+ L D+ V G + + +GQ C V +LV++ A E L
Sbjct: 249 GNDPLIVMEDADLDRAADLAV------KGSYKN-SGQRCTAVKRMLVQESVADRFTELLV 301
Query: 274 TTIKKFYGENPKD-SKSISRIINE---YHFERLRKLLKDPLVADAIVHGGLL----DKEN 325
+ + +P D S + +I+E FE V +AI G L ++
Sbjct: 302 EKTRAWRYGDPMDPSVDMGTVIDEAAAILFEAR--------VNEAIAQGARLLLGNVRDG 353
Query: 326 LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETF 385
PT+L ++ EE FGP+ P+I +I ++I NS L+ T +
Sbjct: 354 ALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDY 413
Query: 386 KKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
+ ++ G++ + +L ++ PFGG+ SG+G G
Sbjct: 414 ITRFIAELQVGTVNVWEVPGYRL-ELTPFGGIKDSGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 2e-16
Identities = 117/448 (26%), Positives = 191/448 (42%), Gaps = 41/448 (9%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV 61
AA+ ++E +A R F + S+ R ++ LL++ ++ + + + ++ GK
Sbjct: 31 AASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW 90
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS-EPFGVVLICSAWNF 120
ET R E+ + K A+S + P+ P V+ P GVV + +NF
Sbjct: 91 ET-RTEVASM--IGKVAISIKAYHERTGESENPM---PDGRAVLRHRPHGVVAVFGPYNF 144
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY----LDCKAIKVTNGGVDV 176
P +L ++ A+ AGNTV+ KPSEL A ET+ L+ L + + G +
Sbjct: 145 PGHLPNGHIVPALLAGNTVVFKPSELTPWVAE---ETVKLWEKAGLPAGVLNLVQGARET 201
Query: 177 CEQLLQQK-WNKIFFTGSPRVGSIVMSAAA----KHLTPVTLELGGKCPAILDTLSSPLD 231
L + + FTGS G ++ A K L LE+GG P I+D ++ D
Sbjct: 202 GVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKIL---ALEMGGNNPLIVDEVA---D 255
Query: 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEK-----KFAATLIESLKTTIKKFYGENPKD 286
I V II F S GQ C +LV F A L+E + + P+
Sbjct: 256 IDAAVHLIIQSAFISA-GQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQ- 313
Query: 287 SKSISRIINEYHFERL----RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEI 342
+ +I+ +RL KLL +++ LD + P I +D AE+
Sbjct: 314 -PFMGAVISLQAAQRLLAAQAKLLALG--GKSLLAMRQLDPGAALLTPGI-IDVTGVAEL 369
Query: 343 MTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
EE FGP+L +I ++ E+I N+ L+ + D + + +G + +N
Sbjct: 370 PDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNK 429
Query: 403 TLVQQLCDVLPFGGVGQSGIGRYHGHYS 430
L PFGG+G SG R +Y+
Sbjct: 430 PLTGA-SSAAPFGGIGASGNHRPSAYYA 456
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 3e-16
Identities = 111/467 (23%), Positives = 181/467 (38%), Gaps = 95/467 (20%)
Query: 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
A +++ + R F + S R+ + LL++N++++ + + ++ GK
Sbjct: 32 NDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPL 91
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSE-----------PF 109
E E+ + K A+S A +R +GE SE P
Sbjct: 92 WEA-ATEVTAM--INKIAISIQ----AYHER---------TGEKRSEMADGAAVLRHRPH 135
Query: 110 GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY----LDCK 165
GVV + +NFP +L ++ A+ AGNTV+ KPSEL A T+ L+ L
Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEL---TVKLWQQAGLPAG 192
Query: 166 AIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTP---VTLELGGKCPA 221
+ + GG + + L + + FTGS G ++ A P + LE+GG P
Sbjct: 193 VLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQ--PEKILALEMGGNNPL 250
Query: 222 ILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEK-KFAATLIESLKTTIKK-- 278
++D ++ DI V II F S GQ C +LV + + L K+
Sbjct: 251 VIDEVA---DIDAAVHLIIQSAFISA-GQRCTCARRLLVPQGAQGDAFLARLVAVAKRLT 306
Query: 279 ----------FYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFI 328
F G IS + +LL L +++ L +
Sbjct: 307 VGRWDAEPQPFMG------AVISEQAAQGLVAAQAQLLA--LGGKSLLEMTQLQAGTGLL 358
Query: 329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDET---- 384
P I+ D AE+ EE FGP+L ++ ++ E+I N+ L+ + D
Sbjct: 359 TPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQ 417
Query: 385 FKKQI----------VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
F +I ++G SS + PFGGVG SG
Sbjct: 418 FLLEIRAGIVNWNKPLTGASSAA---------------PFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 1e-14
Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 27/348 (7%)
Query: 105 VSEPFGVVLICSAWNFPIN-LALEPLIGAIAAGNTVMLK--PSELAVECAS--FLAETIP 159
V P G+V + +A+NFP L I A+ GN V+ K P+ + A +AE +
Sbjct: 151 VWNPLGIVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLE 209
Query: 160 LYLDCKAIKVT-NGGVDVCEQL-LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGG 217
AI + GG ++ E + + + FTGS +VG +V LEL G
Sbjct: 210 KNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSG 269
Query: 218 KCPAILDTLSSPLDIKVTVKRIIGGKFASCN--GQVCVGVDYILVEKKFAATLIESLKTT 275
I+ DI++ V+ ++ FA+ GQ C +L+ + ++E L T
Sbjct: 270 NNAIIV---MDDADIQLAVRSVL---FAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTV 323
Query: 276 IKKFYGENPKDSKSISRIINEYH----FERLRKLLKDPLVADAIVHGG-LLDKENLFIEP 330
K+ +P + ++ ++ FE+ +++K I+ GG ++ E F++P
Sbjct: 324 YKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQ--GGKILTGGSAIESEGNFVQP 381
Query: 331 TILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD-ETFKKQI 389
TI+ P DA+++ EE+FGP+L ++ ++E+IE NS P+ L+ FT++ ET K I
Sbjct: 382 TIVEISP-DADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWI 440
Query: 390 VSGTSSGSLIFNDTLVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSH 436
S I N + ++ FGG +G GR G S++ +
Sbjct: 441 -GPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 2e-13
Identities = 97/341 (28%), Positives = 151/341 (44%), Gaps = 39/341 (11%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAET-IPLYL 162
P G V+ S WNFP+ + + A+AAGN+V+ KP+E +A + L E +P
Sbjct: 768 PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPA-- 825
Query: 163 DCKAIKVTNG-GVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHL------TPVTLE 214
+++ G G V L+ + + FTGS V ++ A L P+ E
Sbjct: 826 --GVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAE 883
Query: 215 LGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKT 274
GG+ I+D SS L +V V ++ F S GQ C + + ++ A ++ L+
Sbjct: 884 TGGQNAMIVD--SSALTEQV-VADVLASAFDSA-GQRCSALRVLCLQDDVADRTLKMLRG 939
Query: 275 TIKKFYGENPKD-SKSISRIIN-------EYHFERLRKLLKDPLVADAIVHGGLLDKENL 326
+ + NP S I +I+ E H + +R K V A +
Sbjct: 940 AMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRA--KGRPVFQAARENSEDWQSGT 997
Query: 327 FIEPT-ILLDPPLDAEIMTEEIFGPILPII--TLNNIQESIEFINSRPKPLAIYAFTK-D 382
F+ PT I LD + + E+FGP+L ++ N + E IE IN+ L + T+ D
Sbjct: 998 FVPPTLIELD---SFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRID 1054
Query: 383 ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG 423
ET Q+ G+L N +V + V PFGG G SG G
Sbjct: 1055 ETI-AQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
|
Length = 1318 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 70.9 bits (173), Expect = 6e-13
Identities = 102/453 (22%), Positives = 176/453 (38%), Gaps = 31/453 (6%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E + ++ +Q F + R+ + EL++ N DK+ + + GK T +D
Sbjct: 152 EFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGK----TLKD 207
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
G I + + LP + + EP GV +NFP + L
Sbjct: 208 SHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPL 267
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKAIKVTNGGVDVCEQLLQ-QK 184
A+ GNT +LKPSE + LAE + L + + +G D + +
Sbjct: 268 WMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDED 327
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
+ F GS G + + AA + +G K ++ +I T+ ++ F
Sbjct: 328 IRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLV---LPDANIDATLNALLAAGF 384
Query: 245 ASCNGQVCVGVDYILV---EKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301
+ GQ C+ + ++ K + L+E K +K G P + +I++ ER
Sbjct: 385 GAA-GQRCMALSTVVFVGDAKSWEDKLVERAKA-LKVTCGSEP--DADLGPVISKQAKER 440
Query: 302 LRKLLKDPLVADAIVHGGLLDKENL---------FIEPTILLDPPLDAEIMTEEIFGPIL 352
+ +L++ + A + LLD ++ FI PTIL D E EEIFGP+L
Sbjct: 441 ICRLIQSGVDDGAKL---LLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVL 497
Query: 353 PIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVL 412
+ N+ E+I IN FT ++ +G + N + L
Sbjct: 498 VCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPL-PFF 556
Query: 413 PFGGVGQSGIG--RYHGHYSFETFSHEKAIMQR 443
F G S G ++G + F+ K + Q+
Sbjct: 557 SFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQK 589
|
Length = 604 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 8e-12
Identities = 61/267 (22%), Positives = 101/267 (37%), Gaps = 21/267 (7%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI--PLYLDCK 165
P+G VL+ A+NFP+ + L L GA+A GN V++KP + + L +
Sbjct: 100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159
Query: 166 AIKVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILD 224
+ + NG + LL + FTGS RV + A + LEL G +
Sbjct: 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDA--KQARIYLELAGFNWKV-- 215
Query: 225 TLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAAT-LIESLKTTIKKFYGEN 283
L V +C+GQ C + V + ++ T L+E LK + +
Sbjct: 216 -LGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLAR---RK 271
Query: 284 PKDSKSISRIIN---EYHFERLRKLLKDPLVAD-AIVHGGLLDKENLFIEPTILLDP--P 337
+D + + + LL L+ + + + L P
Sbjct: 272 LEDL-LLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDE 330
Query: 338 LDA--EIMTEEIFGPILPIITLNNIQE 362
+ E++TEEIFGP ++ Q
Sbjct: 331 ILKTYELVTEEIFGPFAIVVEYKKDQL 357
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 2e-11
Identities = 98/361 (27%), Positives = 154/361 (42%), Gaps = 80/361 (22%)
Query: 106 SEPFGVVLICSAWNFPINLALEPLIG----AIAAGNTVMLKPSE-------LAVECASFL 154
+P G V+ S WNFP LA+ G A+ AGNTV+ KP+E AV L
Sbjct: 674 HKPLGPVVCISPWNFP--LAI--FTGQIAAALVAGNTVLAKPAEQTPLIAARAVR---LL 726
Query: 155 AET-IPLYLDCKAIKVTNG-GVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLT-P 210
E +P A+++ G G V L+ + + FTGS V ++ AK P
Sbjct: 727 HEAGVP----KDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPP 782
Query: 211 VTL--ELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATL 268
V L E GG+ I+D SS L +V V +I F S GQ C + + +++ A +
Sbjct: 783 VPLIAETGGQNAMIVD--SSALPEQV-VADVIASAFDSA-GQRCSALRVLCLQEDVADRV 838
Query: 269 IESLKTTIKKFYGENPK----------DSKSISRIINEYHFERLR---KLLKDPLVADAI 315
+ LK + + +P D+++ + I E H E +R +L+ +
Sbjct: 839 LTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANI--EAHIEAMRAAGRLVHQLPLPAET 896
Query: 316 VHGGLLDKENLFIEPTILLDPPLDAEI-----MTEEIFGPILPIITL--NNIQESIEFIN 368
G F+ PT++ EI + E+FGP+L ++ + + I+ IN
Sbjct: 897 EKGT-------FVAPTLI-------EIDSISDLEREVFGPVLHVVRFKADELDRVIDDIN 942
Query: 369 SRPKPLAIYAFTK------DETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI 422
+ Y T DET + S +G++ N ++ + V PFGG G SG
Sbjct: 943 ATG-----YGLTFGLHSRIDETI-AHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGT 996
Query: 423 G 423
G
Sbjct: 997 G 997
|
Length = 1208 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 79/405 (19%), Positives = 144/405 (35%), Gaps = 42/405 (10%)
Query: 23 ITKSVAW-RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR--DEIGLIKKSAKY-- 77
+ +VAW R+ AL L ++ KAL Q L + Y G ++
Sbjct: 38 VAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYALAATTGATRRDNWVDI 97
Query: 78 --ALSCLDKWMAPKKRRLPLLFFPASGEVVSEPF----------------GVVLICSAWN 119
+ L + + +R LP E EP GV + +A+N
Sbjct: 98 DGGIGTLFTYSSLGRRELPDANLIPEDEF--EPLSKDGSFQGRHILTPKGGVAVQINAFN 155
Query: 120 FPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCK-----AIKVTNGGV 174
FP+ LE A AG + KP+ A L T+ ++ ++++ G
Sbjct: 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTM---VESGLLPEGSLQLICGSA 212
Query: 175 -DVCEQLLQQKWNKIFFTGSPRVGSI--VMSAAAKHLTPVTLELGGKCPAILDTLSSPLD 231
D+ + L + + + FTGS + E AIL ++P +
Sbjct: 213 GDLLDHLDHR--DVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDE 270
Query: 232 IKVTV-KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDSKS 289
+ + + I + GQ C + ++V K ++++L+ + K G+ ++
Sbjct: 271 PEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVD 330
Query: 290 ISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPPLDAE-IMTEEI 347
+ +++ + + L A A + GG + F PT+LL A + E
Sbjct: 331 MGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEA 390
Query: 348 FGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392
FGP+ + E+ L T D +Q + G
Sbjct: 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILG 435
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 83/318 (26%), Positives = 128/318 (40%), Gaps = 34/318 (10%)
Query: 129 LIGAIA-AGNTVMLKPSELAVECASFLAETI--PLYLDCKAIK-VTNGGVDVCEQLLQQK 184
L GA A GNTV+ KPS+ A+ +++L I L I V G V + +L
Sbjct: 188 LAGAPALMGNTVIWKPSDTAM-LSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADP 246
Query: 185 -WNKIFFTGSPRV-----GSIVMSAAAKHLTP-VTLELGGKCPAILDTLSSPLDIKVTVK 237
I FTGS + + H P + E GGK + S+ D++ V
Sbjct: 247 DLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGK-DFHVVHPSA--DVEHVVS 303
Query: 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINE 296
I G F GQ C + V L + + +P D + + +I+E
Sbjct: 304 GTIRGAF-EYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDE 362
Query: 297 YHFERLRKLL----KDPLVADAIVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPI 351
F ++ K + DP A I+ GG D F+EPT++ +M EEIFGP+
Sbjct: 363 KSFAKIVKYIEHAKSDP-SALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPV 421
Query: 352 LPIITLNN--IQESIEFINS-RPKPLAIYAFTKDETFKKQIVSGT-----SSGSLIFNDT 403
L + + +E ++ ++S L F KD + I+ ++G+ ND
Sbjct: 422 LTVYVYPDDKYKEILDLVDSTTSYGLTGAVFAKD---RDAILEADKVLRFAAGNFYINDK 478
Query: 404 LVQQLCDVLPFGGVGQSG 421
+ PFGG SG
Sbjct: 479 PTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 51.7 bits (125), Expect = 7e-07
Identities = 99/377 (26%), Positives = 155/377 (41%), Gaps = 85/377 (22%)
Query: 110 GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE-------LAVECASFLAETIP--- 159
GV + S WNFP+ + L + A+AAGNTV+ KP+E AV+ IP
Sbjct: 686 GVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKL--LHEAGIPKDV 743
Query: 160 LYL---DCKAIK---VTNGGVD-VCEQLLQQKWNKIFFTGSPRVG-SIVMSAAAKHLTPV 211
L L D + + + V FTGS I + AA+ V
Sbjct: 744 LQLLPGDGATVGAALTADPRIAGVA------------FTGSTETARIINRTLAARDGPIV 791
Query: 212 TL--ELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLI 269
L E GG+ I+D S+ L +V V ++ F S GQ C + + V++ A +I
Sbjct: 792 PLIAETGGQNAMIVD--STALPEQV-VDDVVTSAFRSA-GQRCSALRVLFVQEDIADRVI 847
Query: 270 ESLKTTIKKFYGENPK----------DSKSISRIINEYHFERLR---KLLKDPLVADAIV 316
E LK + + +P+ D+++ + + + H ER++ +LL +
Sbjct: 848 EMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANL--DAHIERMKREARLLAQLPLPAGTE 905
Query: 317 HGGLLDKENLFIEPTIL-LDPPLDAEIMTEEIFGPILPIIT-----LNNIQESIEFINSR 370
+G F+ PT +D + E+FGPIL +I L+ + I+ IN+
Sbjct: 906 NG-------HFVAPTAFEID---SISQLEREVFGPILHVIRYKASDLDKV---IDAINAT 952
Query: 371 PKPLAIYAFT-----KDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
Y T + E +I G++ N + + V PFGG G SG G
Sbjct: 953 G-----YGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPK 1007
Query: 426 HG--HYSFETFSHEKAI 440
G HY F+ EK +
Sbjct: 1008 AGGPHYLLR-FATEKTV 1023
|
Length = 1038 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 19/133 (14%)
Query: 231 DIKVTVKRIIGGKFASCNGQVCVGVDYILV----EKKFAATLIESLKTTIKKFYGENPKD 286
D+ V + G F GQ C V + L+E LK IK G+
Sbjct: 298 DVDSLVTATVRGAFEYQ-GQKCSAASRAYVPESLWPEVKERLLEELKE-IK--MGDPDDF 353
Query: 287 SKSISRIINEYHFERLRKLL----KDPLVADAIVHGGLLDK-ENLFIEPTILL--DPPLD 339
S + +I+E F+R++ + DP I+ GG D F+EPT++ DP
Sbjct: 354 SNFMGAVIDEKAFDRIKGYIDHAKSDPEAE--IIAGGKCDDSVGYFVEPTVIETTDP--K 409
Query: 340 AEIMTEEIFGPIL 352
++MTEEIFGP+L
Sbjct: 410 HKLMTEEIFGPVL 422
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 9e-06
Identities = 74/336 (22%), Positives = 114/336 (33%), Gaps = 73/336 (21%)
Query: 108 PFGVVLICSAWNFPINLALEPLIG----AIAAGNTVMLKP-------SELAVECASFLAE 156
P G V + A NFP LA G A+AAG V++K SEL
Sbjct: 105 PLGPVAVFGASNFP--LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIR---- 158
Query: 157 TIPLYLDCKAIKVTN-----------GGVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAA 204
A++ T GG +V L++ K + FTGS R G + AA
Sbjct: 159 --------AALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAA 210
Query: 205 AKHLT--PVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC---NGQVCV--GVDY 257
A P ELG P + P + + I G S GQ C G+
Sbjct: 211 AARPEPIPFYAELGSVNPVFI----LPGALAERGEAIAQGFVGSLTLGAGQFCTNPGL-- 264
Query: 258 ILVEKKFAAT-LIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIV 316
+LV A I +L + + I+ + + + L +
Sbjct: 265 VLVPAGPAGDAFIAALAEALAAA-PAQTMLTPGIAE-----AYRQGVEALAAAPGVRVLA 318
Query: 317 HGGLLDKENLFIEPTIL-------LDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS 369
G + N PT+ L P + EE+FGP ++ ++ E + +
Sbjct: 319 GGAAAEGGNQA-APTLFKVDAAAFLADPA----LQEEVFGPASLVVRYDDAAELLAVAEA 373
Query: 370 RPKPL--AIYAFTKDETFKKQIVSGTSS--GSLIFN 401
L I+ D ++++ G L+FN
Sbjct: 374 LEGQLTATIHGEEDDLALARELLPVLERKAGRLLFN 409
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 48/263 (18%), Positives = 83/263 (31%), Gaps = 22/263 (8%)
Query: 24 TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIG--LIKKSAKYALSC 81
R + A+ L D ++ + G + + I +S Y
Sbjct: 12 VNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNID 71
Query: 82 LDKWMAPKKRRLPLLFFPASGE--VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTV 139
++ + + + P +GE V + P GV + P+ + + IA N
Sbjct: 72 TERGITASVGHIQDVLLPDNGETYVRAFPIGVTMHILPSTNPL-SGITSALRGIATRNQC 130
Query: 140 MLKPSELAVECASFLA----ETIPLYLDCKAIK-VTNGGVDVCEQLLQQ-KWNKIFFTGS 193
+ +P A LA + + V + ++ E+LL K + I TG
Sbjct: 131 IFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGG 190
Query: 194 PRVGSIVMSAAAKH--LTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQV 251
+ AA KH PV G P ++D D + + KF +
Sbjct: 191 RD----AVDAAVKHSPHIPVIGFGAGNSPVVVD---ETADEERASGSVHDSKFF--DQNA 241
Query: 252 CVGVDYILVEKKFAATLIESLKT 274
C + V L E K
Sbjct: 242 CASEQNLYVVDDVLDPLYEEFKL 264
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 37/320 (11%)
Query: 110 GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKP----SELAVECASFLAETIPLYLDCK 165
GV + +A+NFP+ LE A+ AG V++KP + L + E+ L
Sbjct: 146 GVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGL--LPEG 203
Query: 166 AIKVTNGGV-DVCEQLLQQKWNKIFFTGSPRVGSIVMS--AAAKHLTPVTLELGGKCPAI 222
A+++ G V D+ + L +Q + + FTGS + + + E AI
Sbjct: 204 ALQLICGSVGDLLDHLGEQ--DVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAI 261
Query: 223 L------DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
L T L +K V R + K GQ C + V + +IE+LK +
Sbjct: 262 LGPDATPGTPEFDLFVK-EVAREMTVK----AGQKCTAIRRAFVPEARVDAVIEALKARL 316
Query: 277 KKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENL-------- 326
K +P + + +++ E +R + L+A+A +V GG E +
Sbjct: 317 AKVVVGDPRLEGVRMGPLVSREQREDVRAAVAT-LLAEAEVVFGGPDRFEVVGADAEKGA 375
Query: 327 FIEPTILL-DPPLDAEIMTE-EIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDET 384
F PT+LL D P A + + E FGP+ ++ +++ E+IE L T D
Sbjct: 376 FFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPA 435
Query: 385 FKKQIVSGTSS--GSLIFND 402
F +++V G + G L+ +
Sbjct: 436 FARELVLGAAPYHGRLLVLN 455
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 9e-05
Identities = 75/373 (20%), Positives = 128/373 (34%), Gaps = 61/373 (16%)
Query: 85 WMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
W P+ + PL +V +V+ CS FP L ++A GN V++KP
Sbjct: 173 WEKPQGKNDPLKL-KKRFTIVPRGIALVIGCST--FPTWNTYPGLFASLATGNPVLVKPH 229
Query: 145 E-------LAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQL-LQQKWNKIFFTGSPRV 196
L V+ A + + + + G + ++L I FTGS
Sbjct: 230 PGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289
Query: 197 GSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC--NGQVCVG 254
G + A + V E G I++ S D K ++ + F+ +GQ+C
Sbjct: 290 GQWLEQNARQAQ--VYTEKAGVNTVIIE---STDDYKAMLRNL---AFSLSLYSGQMCTT 341
Query: 255 VDYILV---------EKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERL--- 302
ILV +K + L T I G+ + + + I + R+
Sbjct: 342 TQAILVPRDGIRTDQGRKSYDEVAADLATAIDGLLGDPARATAVLGAIQSPDTLARIAEA 401
Query: 303 ---------RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP 353
++ P A V P +L D +E FGPI
Sbjct: 402 RALGEVLLASTKIEHPEFPGARVR-----------TPLLLKCDAADEAAYMQERFGPIAF 450
Query: 354 IITLNNIQESIEFINS--RPK-PLAIYAFTKDETFKKQIVSGT--SSGSLIFNDT---LV 405
++ +++ ++E R K + + A+T D + ++ +L N T V
Sbjct: 451 VVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFV 510
Query: 406 QQLCDVLPFGGVG 418
Q F G G
Sbjct: 511 NQSAAFSDFHGTG 523
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 5e-04
Identities = 72/354 (20%), Positives = 120/354 (33%), Gaps = 82/354 (23%)
Query: 85 WMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
W P+ + PL + VV +V+ CS FP L ++A GN V++KP
Sbjct: 173 WEKPQGKHDPLAM-EKTFTVVPRGVALVIGCST--FPTWNGYPGLFASLATGNPVIVKPH 229
Query: 145 ELAV--------ECASFLAET------IPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFF 190
A+ LAE + L D + E + I F
Sbjct: 230 PAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRI------IDF 283
Query: 191 TGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC--N 248
TGS G + + A + V E G ++D+ D+K ++ + F+ +
Sbjct: 284 TGSNAFGDWLEANARQAQ--VYTEKAGVNTVVVDSTD---DLKAMLRNL---AFSLSLYS 335
Query: 249 GQVCVGVDYILVEK-------------KFAATLIESLKTTIKKFYGENPKDSKSISRIIN 295
GQ+C I V + + AA L + I + + + + I +
Sbjct: 336 GQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAA----IDGLLADPARAAALLGAIQS 391
Query: 296 EYHFERLRK------LLKD------PLVADAIVHGGLLDKENLFIEPTILLDPPLDAE-- 341
R+ + +L P DA V LL K LDA
Sbjct: 392 PDTLARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLK--------------LDASDE 437
Query: 342 -IMTEEIFGPILPIITLNNIQESIEFINS--RPK-PLAIYAFTKDETFKKQIVS 391
EE FGPI ++ ++ SIE R + + ++ D +++
Sbjct: 438 AAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQE 491
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 42/314 (13%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLK-PSELAVECASFLAETIPLYL---D 163
P+G V I + +NFP+ + L+GA+ GN +LK S+++V FL + D
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATD 201
Query: 164 CKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVT-----LELGGK 218
I + G + + LL+ FTGS +V A+ L LE G
Sbjct: 202 VDLIH--SDGPTMNKILLEANPRMTLFTGSSKV--------AERLALELHGKVKLEDAGF 251
Query: 219 CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK 278
IL S +D V +C+GQ C + + + I +K
Sbjct: 252 DWKILGPDVSDVDY---VAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILD---KLKA 305
Query: 279 FYGENPKDSKSISRII---NEYHFERLRKLLKDPLVADAIVHGGLLDKENL-----FIEP 330
+ + +I ++ E + + KLL P A + G L ++ EP
Sbjct: 306 LAEQRKLEDLTIGPVLTWTTERILDHVDKLLAIP-GAKVLFGGKPLTNHSIPSIYGAYEP 364
Query: 331 TILLDP------PLDAEIMTEEIFGPILPIITLNNIQES--IEFINSRPKPLAIYAFTKD 382
T + P + E++T E+FGP + + Q +E + L + D
Sbjct: 365 TAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSND 424
Query: 383 ETFKKQIVSGTSSG 396
F +++++ T +G
Sbjct: 425 IRFLQEVLANTVNG 438
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.97 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.77 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.49 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.14 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.33 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.31 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.94 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.75 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.75 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 95.86 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 95.82 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 95.3 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 94.73 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 94.68 | |
| PLN02926 | 431 | histidinol dehydrogenase | 92.77 |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-104 Score=817.02 Aligned_cols=475 Identities=50% Similarity=0.883 Sum_probs=441.3
Q ss_pred CHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHH
Q 038617 4 AMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLD 83 (484)
Q Consensus 4 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~ 83 (484)
...|+++++++|++||++|+++++++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.++++++.++
T Consensus 8 ~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~ 87 (484)
T PLN02174 8 GAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLK 87 (484)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999876799999999999999999
Q ss_pred HhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccC
Q 038617 84 KWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp 163 (484)
+|.++..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~lp 167 (484)
T PLN02174 88 NWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLD 167 (484)
T ss_pred HHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 88775443222222234568899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhh
Q 038617 164 CKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGK 243 (484)
Q Consensus 164 ~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~ 243 (484)
+|++|+++|+.+.+..|+++++|+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.+++++
T Consensus 168 ~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~---dADl~~Aa~~i~~g~ 244 (484)
T PLN02174 168 SSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDS---DTDLKVTVRRIIAGK 244 (484)
T ss_pred CCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcC---CCCHHHHHHHHHHHH
Confidence 99999999977778888875599999999999999999999999999999999999999999 999999999999999
Q ss_pred c-ccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcC
Q 038617 244 F-ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD 322 (484)
Q Consensus 244 ~-~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~ 322 (484)
| . |+||.|++++|+|||++++|+|+++|+++++++++|+|.+++++||++++.+++++.++|+++.+++++++||..+
T Consensus 245 f~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~ 323 (484)
T PLN02174 245 WGC-NNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKD 323 (484)
T ss_pred hhC-CCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcC
Confidence 8 8 9999999999999999999999999999999999999955889999999999999999999986678999999765
Q ss_pred CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECC
Q 038617 323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402 (484)
Q Consensus 323 ~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 402 (484)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+
T Consensus 324 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~ 403 (484)
T PLN02174 324 RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVND 403 (484)
T ss_pred CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCCchHHHHHHHHHhhhhhHHHHHHhhcc
Q 038617 403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGL 482 (484)
Q Consensus 403 ~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (484)
+..+...+.+||||+|.||+|+++|.+|+++||+.|+|+++..+.+.+++||||+++|.++++.+++..+|++++-+.|+
T Consensus 404 ~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (484)
T PLN02174 404 IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGL 483 (484)
T ss_pred CcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCccCcccccCCCCChHHHHHHHHHHhhchhhhhhccccC
Confidence 87654457899999999999999999999999999999988776788999999999999999999987888877666554
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-101 Score=797.16 Aligned_cols=481 Identities=68% Similarity=1.159 Sum_probs=446.8
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
+..+|+++++++|++||+.|+.+++.+|.++|++++++|++++++|+++++.|+|||..++...|+..+++.++++++.+
T Consensus 3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~ 82 (484)
T PLN02203 3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL 82 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999997669999999999999999
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcccc
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~al 162 (484)
+++.++.....+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~l 162 (484)
T PLN02203 83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYL 162 (484)
T ss_pred HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhC
Confidence 88876432111111223466889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617 163 DCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242 (484)
Q Consensus 163 p~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~ 242 (484)
|+|++|+++|+.++++.|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++...|||++.|++.++++
T Consensus 163 P~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~ 242 (484)
T PLN02203 163 DSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGG 242 (484)
T ss_pred CcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHH
Confidence 99999999998889999999999999999999999999999999999999999999999999611149999999999999
Q ss_pred hc-ccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617 243 KF-ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321 (484)
Q Consensus 243 ~~-~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~ 321 (484)
+| . |+||.|++++|+|||++++|+|+++|++++.++++|+|.+.+++||++++.+++++.++++++.+++++++||..
T Consensus 243 ~f~~-~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~ 321 (484)
T PLN02203 243 KWGS-CAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSI 321 (484)
T ss_pred hccc-CCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCc
Confidence 99 5 799999999999999999999999999999999999995457899999999999999999998766889999876
Q ss_pred CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401 (484)
Q Consensus 322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 401 (484)
+.+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.|+||
T Consensus 322 ~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN 401 (484)
T PLN02203 322 DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFN 401 (484)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEC
Confidence 55699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCCchHHHHHHHHHhhhhhHHHHHHhhc
Q 038617 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLG 481 (484)
Q Consensus 402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (484)
++..+...+.+||||+|.||+|+++|.+++++||+.|+|+.++.+.+.+++||||+++|.++||.++|+.+|.+.+-++|
T Consensus 402 ~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (484)
T PLN02203 402 DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLLG 481 (484)
T ss_pred CcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCccCcccccCCCCChHHHHHHHHHHhhcchhhhccccc
Confidence 88655456789999999999999999999999999999998887678899999999999999999999999999999999
Q ss_pred ccC
Q 038617 482 LKR 484 (484)
Q Consensus 482 ~~~ 484 (484)
++|
T Consensus 482 ~~~ 484 (484)
T PLN02203 482 LKR 484 (484)
T ss_pred cCC
Confidence 997
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-99 Score=786.68 Aligned_cols=462 Identities=47% Similarity=0.827 Sum_probs=431.6
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
++.+|+++++++|++||++|++++.++|.++|++++++|++++++|++++++|+||+..|+...|+..++..++++++++
T Consensus 4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~ 83 (493)
T PTZ00381 4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL 83 (493)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999998779999999999999999
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcccc
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~al 162 (484)
++|++++....+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~l 163 (493)
T PTZ00381 84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYL 163 (493)
T ss_pred HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhC
Confidence 99987654322211223467889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617 163 DCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242 (484)
Q Consensus 163 p~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~ 242 (484)
|+|++++++|+.+.+..|+++++|+|+||||+.+|+.|+++++++++|+++|+|||||+||++ |||++.|++.++++
T Consensus 164 p~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~---dAdl~~Aa~~i~~g 240 (493)
T PTZ00381 164 DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDK---SCNLKVAARRIAWG 240 (493)
T ss_pred CcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcC---CCCHHHHHHHHHHH
Confidence 999999999988889999998999999999999999999999999999999999999999999 99999999999999
Q ss_pred hcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcC
Q 038617 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD 322 (484)
Q Consensus 243 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~ 322 (484)
+|. |+||.|++++++|||++++|+|+++|++.+.+++++++++++++||++++.+.+++.+++++ +++++++||..+
T Consensus 241 ~~~-naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~--~ga~~~~gG~~~ 317 (493)
T PTZ00381 241 KFL-NAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKD--HGGKVVYGGEVD 317 (493)
T ss_pred HHh-hcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHh--CCCcEEECCCcC
Confidence 999 99999999999999999999999999999999886666888999999999999999999974 378899999776
Q ss_pred CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECC
Q 038617 323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402 (484)
Q Consensus 323 ~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 402 (484)
..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+
T Consensus 318 ~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~ 397 (493)
T PTZ00381 318 IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVIND 397 (493)
T ss_pred CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec--CcCCCCCCCCCCchHHHHHHHHHhhh
Q 038617 403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS--FFLELEPRYPPWNDFKMKFLRLAYDF 470 (484)
Q Consensus 403 ~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~ 470 (484)
+..+...+.+||||+|.||+|++||.+|+++||+.|+|+.+. .+.+.+++||||+.++.++++++++-
T Consensus 398 ~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~ 467 (493)
T PTZ00381 398 CVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLLKL 467 (493)
T ss_pred ccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccccCcccccCCCCChHHHHHHHHHHhc
Confidence 876666789999999999999999999999999999998886 34567899999999999999888643
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-99 Score=719.99 Aligned_cols=469 Identities=49% Similarity=0.858 Sum_probs=451.3
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMA 87 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 87 (484)
+++.++.+|.+|.+.++.|.+.|.++|+++.+.+++|+++|.+++..|.+|+..|+...|+...+..++++++++++|.+
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 55668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccce
Q 038617 88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI 167 (484)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v 167 (484)
++...........+.+++.+|+|||++|+|||||+.+++.++++||+|||+||+|||+.+|.++..|++++-++++++.+
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~ 163 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI 163 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence 88776555555678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccC
Q 038617 168 KVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247 (484)
Q Consensus 168 ~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~ 247 (484)
.+|.|+.+...+|+++++|.|+||||+.+|+.|+.+++++++|++||||||||++|++ |+|++.|++.|.|+++. |
T Consensus 164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~---~~d~~ia~~RI~~gk~~-N 239 (477)
T KOG2456|consen 164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDK---NCDLKIAARRIAWGKWM-N 239 (477)
T ss_pred EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecC---CcCHHHHHHHHHHHhhc-c
Confidence 9999999888999999999999999999999999999999999999999999999999 99999999999999999 9
Q ss_pred CCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCe
Q 038617 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLF 327 (484)
Q Consensus 248 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~ 327 (484)
+||.|.|+++|+++.+++.+|+++++..+.++++.++.++.+++.+||..|++|+..++++. ++++.||..+....|
T Consensus 240 ~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~---~kv~~Gg~~d~~d~~ 316 (477)
T KOG2456|consen 240 SGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET---GKVAIGGESDESDRY 316 (477)
T ss_pred CCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC---CceecCCccchhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999863 899999999888899
Q ss_pred eeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCcccc
Q 038617 328 IEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQ 407 (484)
Q Consensus 328 ~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~ 407 (484)
+.|||+.|+++++++|+||+||||++|+.|++++|+|+.+|+.+-.|++|+||+|....+++.+++.+|.|.+|+...|.
T Consensus 317 I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~ 396 (477)
T KOG2456|consen 317 IAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHV 396 (477)
T ss_pred cCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCC--CCCCCCCchHHHHHHHHHhhhhhHHHHHHhhccc
Q 038617 408 LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGLK 483 (484)
Q Consensus 408 ~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (484)
....+||||+|.||+|++||++|++.|++.|++..++++.+. .+|||||++.|..++|.+++.++++.++..+|+.
T Consensus 397 ~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S~~K~~~lr~~~~~~~~~~i~~~~~~~ 474 (477)
T KOG2456|consen 397 TLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYSPQKLTLLRFLLESRLFQAILLSAGLL 474 (477)
T ss_pred EeeccCcCCcCccccccccccccccccccchhhhhcccccchhhhhcCCCCChHHHHHHHHHHHhHHHHHHHHhheeE
Confidence 889999999999999999999999999999999999988886 8999999999999999999999999888777764
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-96 Score=761.25 Aligned_cols=432 Identities=32% Similarity=0.452 Sum_probs=405.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|+.||+.|+++++.+|.++|++++++|++++++|+.++++|+|||+.+++. |+..+++.++|++..
T Consensus 32 ~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~ 110 (472)
T COG1012 32 AATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEARG-EIARAADFIRYYAEE 110 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688899999999999999999999999999999999999999999999999999999999986 799999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+.. .... .....+++++|+|||++|+|||||+++.+++++|||++||+||+|||+.+|+++..+++++.++
T Consensus 111 ~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~a 186 (472)
T COG1012 111 ARRLEGET-IPTD---KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEA 186 (472)
T ss_pred HHHhcCCc-cCCC---CCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHh
Confidence 98765543 1111 1557889999999999999999999999999999999999999999999999999999999887
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.
T Consensus 187 glP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~---dAdl~~Av~~ 263 (472)
T COG1012 187 GLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLE---DADLDAAVDA 263 (472)
T ss_pred CCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECC---CCCHHHHHHH
Confidence 99999999999 666899999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCC-CCCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGEN-PKDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
+++++|+ |+||.|++++|+|||+++||+|+++|.++ ++ +++|| .|+++++||++++.+++++.++|+++.+ |+.+
T Consensus 264 ~~~g~f~-n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~ 341 (472)
T COG1012 264 AVFGAFF-NAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARL 341 (472)
T ss_pred HHHHHHh-CCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 9999999 99999999999999999999999999999 66 78999 5999999999999999999999999975 5677
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+.||..+. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++
T Consensus 342 ~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~a 420 (472)
T COG1012 342 LAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEA 420 (472)
T ss_pred EeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCe
Confidence 88887444 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|+|+||+...+...+.+||||+|.||+|+++|.+++++|++.|++..+.
T Consensus 421 G~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 421 GMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred eEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 9999998864456788999999999999999999999999999998764
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-95 Score=761.73 Aligned_cols=431 Identities=25% Similarity=0.372 Sum_probs=402.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 44 ~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~ 122 (482)
T PRK11241 44 KMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEE 122 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999997 4999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.++..+... +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 123 ~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 199 (482)
T PRK11241 123 GKRIYGDTI---PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA 199 (482)
T ss_pred HHHhcCccc---ccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 765433211 11111234578999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||.|+||||+++|+.|++.++++++|+++|+|||||+||++ |||+|.|++.
T Consensus 200 glP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~---dADld~aa~~ 276 (482)
T PRK11241 200 GIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFD---DADLDKAVEG 276 (482)
T ss_pred CCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcC---CCCHHHHHHH
Confidence 99999999999 567889999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 277 i~~~~f~-~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl 355 (482)
T PRK11241 277 ALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVV 355 (482)
T ss_pred HHHHHHh-cCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999874 77999
Q ss_pred eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 356 ~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~ 435 (482)
T PRK11241 356 CGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEY 435 (482)
T ss_pred ecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCc
Confidence 999754 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 436 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 436 GIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred cEEEECCCCC--CCCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence 9999998764 34578999999999999999999999999999865
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-95 Score=765.89 Aligned_cols=433 Identities=21% Similarity=0.278 Sum_probs=404.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||+.++.. |+..+++.+++++..
T Consensus 147 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~ 225 (604)
T PLN02419 147 LTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGM 225 (604)
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999974 999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+... +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 226 a~~~~g~~~---~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eA 302 (604)
T PLN02419 226 ATLQMGEYL---PNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEA 302 (604)
T ss_pred HHHhhCCcc---cccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHh
Confidence 877654321 11112345678999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|+||+++|+.+.++.|+.|+ ||+|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 303 GlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~---DADld~Aa~~i 379 (604)
T PLN02419 303 GLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLP---DANIDATLNAL 379 (604)
T ss_pred CcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcC---CCCHHHHHHHH
Confidence 99999999999777889999987 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|||||++ +|+|+++|.++++++++|+| ++++++||++++.+++++.++|+++.+ |+++++
T Consensus 380 v~g~f~-naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~ 457 (604)
T PLN02419 380 LAAGFG-AAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLL 457 (604)
T ss_pred HHHHHh-hCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEe
Confidence 999999 99999999999999999 89999999999999999999 889999999999999999999999874 779999
Q ss_pred CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
||... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++++
T Consensus 458 GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~ 537 (604)
T PLN02419 458 DGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMD 537 (604)
T ss_pred CCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHh
Confidence 98642 3589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++|.|+||+.. +...+.+||||+|.||+| +++|.+|+++|++.|+|++..
T Consensus 538 l~aG~V~IN~~~-~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 538 IEAGQIGINVPI-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred CCeeeEEEcCCC-CCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 999999999874 234578999999999999 799999999999999998765
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-96 Score=692.11 Aligned_cols=433 Identities=26% Similarity=0.379 Sum_probs=409.8
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
.+.+|.++||++|.+||.+|+.++..+|.++|+++.++|.+|.++|+++++.|.|||+.|++. ||..+...++|+++..
T Consensus 58 ~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA 136 (503)
T KOG2451|consen 58 MTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEA 136 (503)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHh
Confidence 567899999999999999999999999999999999999999999999999999999999984 9999999999999999
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY- 161 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a- 161 (484)
++.+++.. +.........+.++|+||+++|+|||||.+...++..+||++||+||+||++++|++++.++++..++
T Consensus 137 ~RvyGdii---~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AG 213 (503)
T KOG2451|consen 137 RRVYGDII---PSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAG 213 (503)
T ss_pred hhhhcccc---CCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcC
Confidence 98877653 22234457788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccCC----hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 162 LDCKAIKVTNGG----VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 162 lp~g~v~~v~g~----~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
+|+|++|+|+++ .+.++.|+.+| |..|+||||+.+|+.++++++.+.|++.+|||||.|+||++ |||+|+|+
T Consensus 214 iP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIVFd---dadld~Av 290 (503)
T KOG2451|consen 214 IPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIVFD---DADLDQAV 290 (503)
T ss_pred CCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEEec---CcCHHHHH
Confidence 999999999962 47899999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+..+..+|. ++||.|.+.+|+|||++|||+|++.|.+++.++++||. ++++..||+||+.+.++++.++++|.. |++
T Consensus 291 ~g~mA~KFr-~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ 369 (503)
T KOG2451|consen 291 EGAMACKFR-NSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAK 369 (503)
T ss_pred HHHHHhhhc-cCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCe
Confidence 999999999 99999999999999999999999999999999999998 999999999999999999999999985 689
Q ss_pred eeeCCC-cCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 315 IVHGGL-LDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 315 ~~~gg~-~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+++||+ +.+ ..+|++|||+.+++++|-+..||+|||+.+|++|+|.||+|+++|+++.||++|+||+|..+..+++++
T Consensus 370 ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~ 449 (503)
T KOG2451|consen 370 IILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEA 449 (503)
T ss_pred EEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHH
Confidence 999998 444 458999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
|++|+|-+|.... .....||||+|+||+||+++.+|+++|+..|++++...
T Consensus 450 LEvGmVGvNegli--s~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L 500 (503)
T KOG2451|consen 450 LEVGMVGVNEGLI--SDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTL 500 (503)
T ss_pred Hhcceeeccccee--cccccCcCCccccccCccccccchhhhhhhheeeecCc
Confidence 9999999998765 57889999999999999999999999999999988753
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-96 Score=725.21 Aligned_cols=433 Identities=28% Similarity=0.404 Sum_probs=407.6
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+||++|+++||+||+ .|++++..+|.++|++++++++++++.|+...+.+.|||..+++..++..+++.++|++
T Consensus 54 ~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~a 133 (501)
T KOG2450|consen 54 EATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYA 133 (501)
T ss_pred cccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhc
Confidence 4789999999999999999 79999999999999999999999999999999999999999999679999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...++.... ..........+++++|+||++.|.|||||+....|+++|||++||+||+||++++|+|+..+++++.
T Consensus 134 g~ad~~~~~----~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~ 209 (501)
T KOG2450|consen 134 GWADKIHGS----TIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCK 209 (501)
T ss_pred cchhhcccc----cCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhH
Confidence 888665221 1122233467899999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
++ +|+|++|+|+| +.+.+.+|.+|+ ||.|.||||+.+|+.|+++++ .++||++||+|||+|.||++ |||++.|
T Consensus 210 eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~---Dadld~a 286 (501)
T KOG2450|consen 210 EAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFD---DADLDLA 286 (501)
T ss_pred HhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEec---ccchHHH
Confidence 99 99999999999 789999999997 999999999999999999888 45899999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VA 312 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~ 312 (484)
++.+..+.|+ |+||.|++.+|+|||++|||+|++.++++..+ +++||| ++.+.+||.+++.|++|+.+||+.+. +|
T Consensus 287 v~~~~~~iF~-nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eG 365 (501)
T KOG2450|consen 287 VENAAFGIFF-NQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEG 365 (501)
T ss_pred HHHHHHHhhc-ccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcC
Confidence 9999999999 99999999999999999999999999999976 899999 89999999999999999999999987 47
Q ss_pred CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||.+ ...|+|+.|||+.++.++|.|++||+||||++|++|++.||+|+++|++.|||+++|||+|.+++.++++
T Consensus 366 a~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~ 445 (501)
T KOG2450|consen 366 ATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVAN 445 (501)
T ss_pred CEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHH
Confidence 899999966 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+||||+... .....||||+|+||+||+.|.+++.+|++.|+|+++-
T Consensus 446 ~l~aGtVwiN~y~~--~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~ 496 (501)
T KOG2450|consen 446 ALQAGTVWINCYNV--FDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL 496 (501)
T ss_pred HhcCceEEEecccc--ccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence 99999999999865 5789999999999999999999999999999998763
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-94 Score=749.04 Aligned_cols=432 Identities=24% Similarity=0.360 Sum_probs=401.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||++|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus 34 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~ 113 (472)
T TIGR03374 34 EASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGA 113 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999988756999999999999877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+... .. .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 114 ~~~~~~~-~~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~ 190 (472)
T TIGR03374 114 ARCLSGL-AA--GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI 190 (472)
T ss_pred HHHhcCc-cc--CccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh
Confidence 6554321 11 11112345678999999999999999999999999999999999999999999999999999999888
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ +|+|.||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 191 lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~---dadl~~aa~~i 267 (472)
T TIGR03374 191 FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFD---DADIDAVVEGV 267 (472)
T ss_pred CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECC---CCCHHHHHHHH
Confidence 99999999999 667899999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C-Ccee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A-DAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~-~~~~ 316 (484)
++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ | ++++
T Consensus 268 ~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~ 346 (472)
T TIGR03374 268 RTFGFY-NAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVI 346 (472)
T ss_pred HHHHHh-hcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999875 4 5899
Q ss_pred eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 347 ~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~ 426 (472)
T TIGR03374 347 TGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQY 426 (472)
T ss_pred eCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 998754 3589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+++.
T Consensus 427 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 427 GCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred ceEEECCCCC--CCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 9999998764 46789999999999999999999999999999864
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=738.00 Aligned_cols=445 Identities=50% Similarity=0.853 Sum_probs=411.4
Q ss_pred HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89 (484)
Q Consensus 10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 89 (484)
+.+++|++||+.|+++++.+|.++|++++++|++++++|+++++.|+|||+.++...|+..+++.+++++..++.+.+++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999999999999999999999999976699999999999999888876543
Q ss_pred cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617 90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV 169 (484)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~ 169 (484)
.........+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~ 161 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV 161 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence 22111111234567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617 170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG 249 (484)
Q Consensus 170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G 249 (484)
++|+.+.+..|+.|+||.|.||||+++|+.|++.++++++|+++|+|||||+||++ |||+|.|++.+++++|. |+|
T Consensus 162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~---dADld~aa~~i~~~~~~-~~G 237 (449)
T cd07136 162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDE---DANLKLAAKRIVWGKFL-NAG 237 (449)
T ss_pred EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECC---CCCHHHHHHHHHHHHHc-ccC
Confidence 99977888999977899999999999999999999999999999999999999999 99999999999999999 999
Q ss_pred CccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeee
Q 038617 250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIE 329 (484)
Q Consensus 250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~ 329 (484)
|.|++++|+|||++++|+|+++|+++++++++|+|..++++||++++.+.+++.++++++ ++++||..+.+|+|+.
T Consensus 238 Q~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a----~~~~gG~~~~~g~~~~ 313 (449)
T cd07136 238 QTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG----KIVFGGNTDRETLYIE 313 (449)
T ss_pred CcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcc----eEEECCCcCCCCCEEe
Confidence 999999999999999999999999999999999984488999999999999999999864 7889987655689999
Q ss_pred eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCC
Q 038617 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC 409 (484)
Q Consensus 330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 409 (484)
|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+...+...
T Consensus 314 Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~ 393 (449)
T cd07136 314 PTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLAN 393 (449)
T ss_pred eEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987654445
Q ss_pred CCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCCchHHHH
Q 038617 410 DVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMK 462 (484)
Q Consensus 410 ~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~~~ 462 (484)
+.+||||+|.||+|+++|.+++++||+.|+|++...+.+..++|||++.++.+
T Consensus 394 ~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~~~~~ 446 (449)
T cd07136 394 PYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKSTWFDLPLRYPPYKGKKKK 446 (449)
T ss_pred CCCCccCcCcccCCcccCHHHHHHhccceEEEEcCCcCCccccCCCCchHHHh
Confidence 78999999999999999999999999999998876677789999999866554
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-93 Score=746.95 Aligned_cols=433 Identities=24% Similarity=0.372 Sum_probs=403.4
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 54 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 133 (501)
T PLN02766 54 EGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYA 133 (501)
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999997 59999999999999999999999999999999999999999987569999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+++.+.. .. .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 134 ~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ 209 (501)
T PLN02766 134 GAADKIHGET-LK---MSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAK 209 (501)
T ss_pred HHHHHhcCce-ec---cCCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHH
Confidence 8887764321 11 1122346788999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
++ +|+|++|+|+| +.+.++.|++|+ +|.|.||||+.+|+.|++.++ ++++|+++|+|||||+||++ |||++.|
T Consensus 210 ~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~---dADl~~A 286 (501)
T PLN02766 210 LAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFD---DADVDMA 286 (501)
T ss_pred hcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECC---CCCHHHH
Confidence 98 99999999999 567889999997 999999999999999999998 58999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |+
T Consensus 287 a~~i~~g~f~-n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga 365 (501)
T PLN02766 287 VDLALLGIFY-NKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGA 365 (501)
T ss_pred HHHHHHHHHh-hcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 9999999999 99999999999999999999999999999999999999 888999999999999999999999864 67
Q ss_pred ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus 366 ~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~ 445 (501)
T PLN02766 366 TLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRS 445 (501)
T ss_pred EEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 899999753 4689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++++..
T Consensus 446 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (501)
T PLN02766 446 IRAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL 495 (501)
T ss_pred CCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999997653 5678999999999999999999999999999998764
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-93 Score=739.03 Aligned_cols=431 Identities=21% Similarity=0.362 Sum_probs=402.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 25 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 103 (462)
T PRK13968 25 WAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR-AEVAKSANLCDWYAEH 103 (462)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999997 4999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+.... ...+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 104 ~~~~~~~~~~----~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~a 179 (462)
T PRK13968 104 GPAMLKAEPT----LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDA 179 (462)
T ss_pred HHHhhCCccc----cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHc
Confidence 8777554321 112345688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.+..|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 180 GlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~---dAdl~~aa~~i 256 (462)
T PRK13968 180 GIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN---DADLELAVKAA 256 (462)
T ss_pred CcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECC---CCCHHHHHHHH
Confidence 99999999998555556688887 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|+|||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.. |+++++
T Consensus 257 ~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~ 335 (462)
T PRK13968 257 VAGRYQ-NTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLL 335 (462)
T ss_pred HHHHHh-ccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 888999999999999999999999864 778999
Q ss_pred CCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 318 GGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 318 gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|
T Consensus 336 gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G 415 (462)
T PRK13968 336 GGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECG 415 (462)
T ss_pred CCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcc
Confidence 98753 35899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+|+||+... ..+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus 416 ~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 416 GVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred eEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 999998754 467899999999999999999999999999999764
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-93 Score=737.94 Aligned_cols=433 Identities=24% Similarity=0.357 Sum_probs=403.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus 19 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 97 (457)
T PRK09406 19 ALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA-EALKCAKGFRYYAEH 97 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999974 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++......... .......+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 98 ~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~a 176 (457)
T PRK09406 98 AEALLADEPADAA-AVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176 (457)
T ss_pred HHHHhCCcccccc-CCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHh
Confidence 8887654321111 112235678999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++++.+.+..|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 177 GlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~---dadl~~aa~~i 253 (457)
T PRK09406 177 GFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMP---SADLDRAAETA 253 (457)
T ss_pred CCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECC---CCCHHHHHHHH
Confidence 99999999987656788899887 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus 254 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~ 332 (457)
T PRK09406 254 VTARVQ-NNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILC 332 (457)
T ss_pred HHHHhh-CCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 888999999999999999999999864 778999
Q ss_pred CCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 318 GGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 318 gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
||..+ .+|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|
T Consensus 333 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G 412 (457)
T PRK09406 333 GGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG 412 (457)
T ss_pred CCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcc
Confidence 99763 36899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
+|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|++.+
T Consensus 413 ~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 413 QVFINGMTV--SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred eEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 999998765 46789999999999999999999999999999864
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-92 Score=738.69 Aligned_cols=431 Identities=27% Similarity=0.379 Sum_probs=402.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||++|+++|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++..
T Consensus 34 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~ 113 (475)
T cd07117 34 DATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGV 113 (475)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999766999999999999877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+...... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 114 ~~~~~~~~----~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~ 189 (475)
T cd07117 114 IRAEEGSA----NMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV 189 (475)
T ss_pred HHHhcCcc----cccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh
Confidence 65442211 11112335678999999999999999999999999999999999999999999999999999999988
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 190 lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~---dADl~~aa~~i 266 (475)
T cd07117 190 LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFD---DANWDKALEGA 266 (475)
T ss_pred CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECC---CCChHHHHHHH
Confidence 99999999998 567889999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|||||++++|+|+++|.++++++++|+| ++++++||++++.+++++.++++++.. |+++++
T Consensus 267 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~ 345 (475)
T cd07117 267 QLGILF-NQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILT 345 (475)
T ss_pred HHHHhh-ccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999864 778999
Q ss_pred CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
||... ++|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus 346 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~ 425 (475)
T cd07117 346 GGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARA 425 (475)
T ss_pred CCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHh
Confidence 98653 2589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
+++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 426 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 426 VETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred CCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence 9999999998654 46789999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-92 Score=739.08 Aligned_cols=435 Identities=24% Similarity=0.349 Sum_probs=401.1
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 39 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 118 (486)
T cd07140 39 LATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFA 118 (486)
T ss_pred CCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999998 59999999999999999999999999999999999999999987569999999999999
Q ss_pred HHHHHhhcCccccCcc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 80 SCLDKWMAPKKRRLPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
...++...... .... .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 119 ~~~~~~~g~~~-~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~ 197 (486)
T cd07140 119 GWCDKIQGKTI-PINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELT 197 (486)
T ss_pred HHHHHhcCccc-cccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHH
Confidence 87766533211 1100 011123578899999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+++| +.+.++.|+.|+ ||.|+||||+.+|+.|++.++. ++||+++|+|||||+||++ |||++.
T Consensus 198 ~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~---dadl~~ 274 (486)
T cd07140 198 VKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFA---DCDMDK 274 (486)
T ss_pred HHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECC---CCCHHH
Confidence 998 99999999998 567789999998 9999999999999999999986 8999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |
T Consensus 275 a~~~i~~~~~~-~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G 353 (486)
T cd07140 275 AVRMGMSSVFF-NKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEG 353 (486)
T ss_pred HHHHHHHHHHh-ccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999874 7
Q ss_pred CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+ |++|||+++|+++|||++||||+|.++++++
T Consensus 354 a~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 433 (486)
T cd07140 354 ATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYV 433 (486)
T ss_pred CEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHH
Confidence 899999965 3468999999999999999999999999999999998 6999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus 434 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 434 SDKLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred HHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 9999999999998654 456789999999999999999999999999998753
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-92 Score=741.04 Aligned_cols=433 Identities=28% Similarity=0.417 Sum_probs=403.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 58 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~ 136 (498)
T PLN02278 58 CMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEE 136 (498)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999974 999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+.. .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|.+++.++
T Consensus 137 ~~~~~g~~---~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~ea 213 (498)
T PLN02278 137 AKRVYGDI---IPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQA 213 (498)
T ss_pred HHHhcCcc---cccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 87764321 111112334577899999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 214 glP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~---dAdl~~aa~~ 290 (498)
T PLN02278 214 GIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFD---DADLDVAVKG 290 (498)
T ss_pred CCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECC---CCCHHHHHHH
Confidence 99999999998 456789999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 291 i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl 369 (498)
T PLN02278 291 ALASKFR-NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVL 369 (498)
T ss_pred HHHHHhc-cCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999864 77999
Q ss_pred eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 370 ~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~ 449 (498)
T PLN02278 370 LGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEY 449 (498)
T ss_pred eCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 998653 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|.|+||+...+ .+.+||||+|.||+|+++|++|+++||+.|++.++.
T Consensus 450 G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~ 496 (498)
T PLN02278 450 GIVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGN 496 (498)
T ss_pred CeEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHhheeEEEEEec
Confidence 99999987653 467899999999999999999999999999987653
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-92 Score=739.34 Aligned_cols=436 Identities=28% Similarity=0.384 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++++++|++||+. |++++.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++++
T Consensus 33 ~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 112 (477)
T cd07113 33 SATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAG 112 (477)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999985 99999999999999999999999999999999999999999875699999999999987
Q ss_pred HHHHhhcCcccc-Ccc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 81 CLDKWMAPKKRR-LPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 81 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
....+....... .+. .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~ 192 (477)
T cd07113 113 WATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELA 192 (477)
T ss_pred HHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH
Confidence 766543221100 010 011234578999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 159 PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
.++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|+
T Consensus 193 ~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~---dAdl~~aa 269 (477)
T cd07113 193 KEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLK---DADIDWVV 269 (477)
T ss_pred HHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEECC---CCCHHHHH
Confidence 998 99999999999545889999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. +|++
T Consensus 270 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~ 348 (477)
T cd07113 270 EGLLTAGFL-HQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDE 348 (477)
T ss_pred HHHHHHHHh-hCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 88999999999999999999999986 4789
Q ss_pred eeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 315 IVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 315 ~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus 349 ~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l 428 (477)
T cd07113 349 IVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRI 428 (477)
T ss_pred EEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999753 35899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++|+|+||.+.. ..+.+||||+|.||+|+++|.+++++||+.|+|+.+
T Consensus 429 ~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 429 EAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred CcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 999999997654 457899999999999999999999999999998764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-92 Score=736.99 Aligned_cols=432 Identities=27% Similarity=0.356 Sum_probs=403.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||++.++...|+..+++.++++++.
T Consensus 34 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 113 (480)
T cd07559 34 RSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGV 113 (480)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999767999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+...... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 114 ~~~~~~~~----~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~ 189 (480)
T cd07559 114 IRAQEGSL----SEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL 189 (480)
T ss_pred HHHhcCcc----ccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh
Confidence 76543211 11112345678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC-----CHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL-----DIKV 234 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da-----Dl~~ 234 (484)
+|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ || |++.
T Consensus 190 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~---dA~~~~~Dl~~ 266 (480)
T cd07559 190 LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFD---DAMDADDDFDD 266 (480)
T ss_pred CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcC---CccccccCHHH
Confidence 99999999999 567899999997 99999999999999999999999999999999999999999 99 9999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |
T Consensus 267 aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 345 (480)
T cd07559 267 KAEEGQLGFAF-NQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEG 345 (480)
T ss_pred HHHHHHHHHHh-hCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999874 6
Q ss_pred CceeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617 313 DAIVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK 387 (484)
Q Consensus 313 ~~~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 387 (484)
+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.
T Consensus 346 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~ 425 (480)
T cd07559 346 AEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRAL 425 (480)
T ss_pred CEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHH
Confidence 7999998753 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus 426 ~~a~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 426 RVARGIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS 479 (480)
T ss_pred HHHHhcCcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 999999999999997643 457899999999999999999999999999998764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-92 Score=739.69 Aligned_cols=433 Identities=27% Similarity=0.370 Sum_probs=401.1
Q ss_pred CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+. |+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 91 ~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a 170 (538)
T PLN02466 91 EGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYA 170 (538)
T ss_pred CCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999974 9999999999999999999999999999999999999999987669999999999998
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...++..+... + ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 171 ~~~~~~~g~~~---~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~ 246 (538)
T PLN02466 171 GWADKIHGLTV---P-ADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLH 246 (538)
T ss_pred HHHHHhcCccc---c-cCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHH
Confidence 77665432211 1 1122345789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
++ +|+|++|+|+| +.+.+..|++|+ ||.|.||||+.+|+.|++.++. ++||+++|+|||||+||++ |||++.|
T Consensus 247 eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~---dADl~~A 323 (538)
T PLN02466 247 EAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCE---DADVDKA 323 (538)
T ss_pred hcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcC---CCCHHHH
Confidence 99 99999999999 567788999997 9999999999999999999884 8999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|+|||+++||+|+++|+++..++++|+| ++++++||++++++++++.++++++.+ |+
T Consensus 324 a~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga 402 (538)
T PLN02466 324 VELAHFALFF-NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGA 402 (538)
T ss_pred HHHHHHHHHh-hcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999864 67
Q ss_pred ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus 403 ~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~ 482 (538)
T PLN02466 403 TLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRA 482 (538)
T ss_pred EEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 899998753 3688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+++...
T Consensus 483 l~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 532 (538)
T PLN02466 483 LRVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL 532 (538)
T ss_pred CCeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence 9999999997643 4678999999999999999999999999999997754
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-91 Score=735.00 Aligned_cols=435 Identities=29% Similarity=0.429 Sum_probs=404.4
Q ss_pred CCCHHHHHHHHHHHHHHh-----HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTF-----RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAK 76 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~ 76 (484)
.++.+|+++|+++|++|| +.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++
T Consensus 41 ~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~ 119 (503)
T PLN02467 41 AATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFE 119 (503)
T ss_pred CCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHH
Confidence 478899999999999999 8999999999999999999999999999999999999999999984 9999999999
Q ss_pred HHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 77 YALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
+++...+++.+...............+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus 120 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~ 199 (503)
T PLN02467 120 YYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELAD 199 (503)
T ss_pred HHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHH
Confidence 99988887644321111111112346789999999999999999999999999999999999999999999999999999
Q ss_pred Hhccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617 157 TIPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233 (484)
Q Consensus 157 ~l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~ 233 (484)
++.++ +|+|++|+++| +.+.++.|+.|+ ||.|+||||+.+|+.|++.++.++||+++|+|||||+||++ |||++
T Consensus 200 ~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~---dADl~ 276 (503)
T PLN02467 200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFD---DVDLD 276 (503)
T ss_pred HHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCceEECC---CCCHH
Confidence 99998 99999999999 567889999998 99999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV- 311 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~- 311 (484)
.|++.+++++|. |+||.|++++|||||++++|+|+++|.++++++++||| ++++++||++++.+++++.++++++..
T Consensus 277 ~A~~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~ 355 (503)
T PLN02467 277 KAVEWAMFGCFW-TNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSE 355 (503)
T ss_pred HHHHHHHHHHHh-hcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999 99999999999999999999999999999999999999 889999999999999999999999864
Q ss_pred CCceeeCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 312 ADAIVHGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 312 ~~~~~~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+
T Consensus 356 Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~ 435 (503)
T PLN02467 356 GATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCER 435 (503)
T ss_pred CCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 77999998653 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++++|+|+||+... ....+||||+|.||+|+++|.+|+++|++.|++...
T Consensus 436 ~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 488 (503)
T PLN02467 436 VSEAFQAGIVWINCSQP--CFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKY 488 (503)
T ss_pred HHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEe
Confidence 99999999999998654 356899999999999999999999999999999885
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-92 Score=724.27 Aligned_cols=428 Identities=64% Similarity=1.068 Sum_probs=398.3
Q ss_pred HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89 (484)
Q Consensus 10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 89 (484)
+++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..+..+..+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999999999999999999999999999998876699999999999999887766543
Q ss_pred cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617 90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV 169 (484)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~ 169 (484)
....+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.+++|+|++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~ 162 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV 162 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence 21111111233567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhc-ccCC
Q 038617 170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF-ASCN 248 (484)
Q Consensus 170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~-~~~~ 248 (484)
++|+.+.++.|++|++|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.+++++| . |+
T Consensus 163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~---dAdl~~aa~~i~~~~f~~-~~ 238 (432)
T cd07137 163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDS---TVDLKVAVRRIAGGKWGC-NN 238 (432)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcC---CCCHHHHHHHHHHHhhhc-cC
Confidence 99977888999988899999999999999999999999999999999999999999 9999999999999999 8 99
Q ss_pred CCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCee
Q 038617 249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFI 328 (484)
Q Consensus 249 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~ 328 (484)
||.|++++|+|||++++|+|+++|+++++++++|||++++++||++++.+++++.++++++..++++++||..+.+|+|+
T Consensus 239 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~ 318 (432)
T cd07137 239 GQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYI 318 (432)
T ss_pred CCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEE
Confidence 99999999999999999999999999999999999977889999999999999999999987778899998765568999
Q ss_pred eeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccC
Q 038617 329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQL 408 (484)
Q Consensus 329 ~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~ 408 (484)
.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||++..+..
T Consensus 319 ~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~ 398 (432)
T cd07137 319 EPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYA 398 (432)
T ss_pred eeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998765445
Q ss_pred CCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 409 CDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 409 ~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
.+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 399 ~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 399 IDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 578999999999999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-92 Score=735.03 Aligned_cols=433 Identities=22% Similarity=0.290 Sum_probs=398.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 52 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~ 130 (508)
T PLN02315 52 EASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGL 130 (508)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999996 5999999999999987
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH----HHHH
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF----LAET 157 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~----l~~~ 157 (484)
.+++.+... +....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.. +.++
T Consensus 131 ~~~l~~~~~---~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~ 207 (508)
T PLN02315 131 SRQLNGSII---PSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEV 207 (508)
T ss_pred HHHhcCccc---cCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHH
Confidence 766533211 111112344678999999999999999999999999999999999999999999999887 5677
Q ss_pred hccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 158 IPLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 158 l~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+.++ +|+|++|+++|+.+.++.|++|+ +|+|.||||+++|+.|++.++++++|+++|+|||||+||++ |||++.|
T Consensus 208 ~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~---dADl~~A 284 (508)
T PLN02315 208 LEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMD---DADIQLA 284 (508)
T ss_pred HHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECC---CCCHHHH
Confidence 7888 99999999999777899999997 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++.+||++++.+.+++.++++++.+ |+
T Consensus 285 a~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga 363 (508)
T PLN02315 285 VRSVLFAAVG-TAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGG 363 (508)
T ss_pred HHHHHHHHHH-hcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 888999999999999999999999874 78
Q ss_pred ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh-
Q 038617 314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS- 391 (484)
Q Consensus 314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~- 391 (484)
++++||.. +.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 364 ~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~ 442 (508)
T PLN02315 364 KILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGP 442 (508)
T ss_pred EEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhh
Confidence 89999975 346899999999 599999999999999999999999999999999999999999999999999999984
Q ss_pred -ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 392 -GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 -~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||.++.+ ..+.+||||+|.||+|+++|.+++++||+.|+|+...
T Consensus 443 ~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 443 LGSDCGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
T ss_pred cccceeEEEEcCCCCC-CCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence 799999999986542 3567899999999999999999999999999988763
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-92 Score=736.73 Aligned_cols=433 Identities=27% Similarity=0.341 Sum_probs=402.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++..
T Consensus 40 ~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~ 119 (488)
T PRK13252 40 AATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGL 119 (488)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999766999999999999987
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+...+.. . .. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 120 ~~~~~g~~-~--~~-~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~a 195 (488)
T PRK13252 120 APALEGEQ-I--PL-RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA 195 (488)
T ss_pred HHHhcCce-e--cc-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHc
Confidence 76542211 1 11 12345678999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|+||+++|+.+.++.|+.|+ +|+|+||||+.+|+.|.+.++.+++|+++|+|||||+||++ |||++.|++.+
T Consensus 196 glP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~---dAdl~~A~~~i 272 (488)
T PRK13252 196 GLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFD---DADLDRAADIA 272 (488)
T ss_pred CcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECC---CCCHHHHHHHH
Confidence 99999999999656889999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.++++++++++++.. |+++++
T Consensus 273 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~ 351 (488)
T PRK13252 273 MLANFY-SSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLC 351 (488)
T ss_pred HHHHHh-hcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999998864 779999
Q ss_pred CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus 352 gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~ 431 (488)
T PRK13252 352 GGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQ 431 (488)
T ss_pred CCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHh
Confidence 98642 3589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+|++..
T Consensus 432 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 481 (488)
T PRK13252 432 LEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481 (488)
T ss_pred cCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence 9999999998553 4567899999999999999999999999999998753
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-91 Score=734.72 Aligned_cols=436 Identities=27% Similarity=0.358 Sum_probs=400.9
Q ss_pred CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++
T Consensus 32 ~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~ 111 (481)
T TIGR03216 32 EAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFAD 111 (481)
T ss_pred CCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHH
Confidence 47889999999999999997 99999999999999999999999999999999999999998875699999999999988
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
..+...............+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~ 191 (481)
T TIGR03216 112 VVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA 191 (481)
T ss_pred HHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence 87654322110000011123457889999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-Ch-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
+ +|+|++|+++| +. +.++.|..|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|+
T Consensus 192 aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~---dadl~~aa 268 (481)
T TIGR03216 192 VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFA---DCDFDAAV 268 (481)
T ss_pred cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEECC---CCCHHHHH
Confidence 8 99999999998 44 4778888887 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++++|||++++|+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus 269 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 347 (481)
T TIGR03216 269 AGILRSAFL-NTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT 347 (481)
T ss_pred HHHHHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999874 779
Q ss_pred eeeCCCcC------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 315 IVHGGLLD------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 315 ~~~gg~~~------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
+++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++
T Consensus 348 v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 427 (481)
T TIGR03216 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHR 427 (481)
T ss_pred EEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHH
Confidence 99998653 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++++|+|+||+...+ .+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 428 ~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 428 VARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCIK 480 (481)
T ss_pred HHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999987653 57789999999999999999999999999998753
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-91 Score=723.51 Aligned_cols=440 Identities=49% Similarity=0.832 Sum_probs=404.9
Q ss_pred HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89 (484)
Q Consensus 10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 89 (484)
+|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.++++....
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999876799999999999999998886543
Q ss_pred cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617 90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV 169 (484)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~ 169 (484)
.............++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v 161 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV 161 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence 22111111223568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617 170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG 249 (484)
Q Consensus 170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G 249 (484)
++|+.+.+..|+.+.||.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.+++++|. |+|
T Consensus 162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~---dADl~~aa~~i~~~~f~-~~G 237 (443)
T cd07132 162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDK---SCDIDVAARRIAWGKFI-NAG 237 (443)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcC---CCCHHHHHHHHHHHHHh-cCC
Confidence 99977677788876799999999999999999999999999999999999999999 99999999999999999 999
Q ss_pred CccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeee
Q 038617 250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIE 329 (484)
Q Consensus 250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~ 329 (484)
|.|++++|+|||++++|+|+++|.+++.++++|+|++++++||++++.+++++.+++++ +++++||..+.+++|+.
T Consensus 238 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~ 313 (443)
T cd07132 238 QTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIA 313 (443)
T ss_pred CceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEe
Confidence 99999999999999999999999999999998888888999999999999999999985 47889987655689999
Q ss_pred eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCC
Q 038617 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC 409 (484)
Q Consensus 330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 409 (484)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|.|+||+...+...
T Consensus 314 Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~ 393 (443)
T cd07132 314 PTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTL 393 (443)
T ss_pred eEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987765445
Q ss_pred CCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCC--CCCCCCCc
Q 038617 410 DVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWN 457 (484)
Q Consensus 410 ~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~--~~~~~p~~ 457 (484)
+.+||||+|.||+|+++|.+|+++|++.|+++.++...+. +++|+|++
T Consensus 394 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~ 443 (443)
T cd07132 394 DSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPYS 443 (443)
T ss_pred CCCCCCCCCcccCCCcccHHHHHHhccccEEEEccccccccccccCCCCC
Confidence 7899999999999999999999999999999877632243 78899874
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-91 Score=722.28 Aligned_cols=433 Identities=46% Similarity=0.780 Sum_probs=402.9
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
.+.+|+++|+++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++...|+..+++.+++++..+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999987569999999999999988
Q ss_pred HHhhcCccccCcc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 83 DKWMAPKKRRLPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 83 ~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+++...+...... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~ 161 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY 161 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHh
Confidence 8775443221100 012345678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHH
Q 038617 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241 (484)
Q Consensus 162 lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~ 241 (484)
+|+|++|+++|+.+....|+.|++|.|.||||+.+|+.|++.++.+++|+++|+|||||+||++ |||++.|++.+++
T Consensus 162 lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~---dADl~~aa~~i~~ 238 (436)
T cd07135 162 LDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTK---NADLELAAKRILW 238 (436)
T ss_pred CCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECC---CCCHHHHHHHHHH
Confidence 9999999999865555678888899999999999999999999999999999999999999999 9999999999999
Q ss_pred hhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321 (484)
Q Consensus 242 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~ 321 (484)
++|. |+||.|+++++||||++++|+|+++|+++++++++|+|++++++||++++.+.+++.++++++ ++++++||..
T Consensus 239 ~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~ 315 (436)
T cd07135 239 GKFG-NAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEM 315 (436)
T ss_pred HHhc-cCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCc
Confidence 9999 999999999999999999999999999999999999988888999999999999999999987 7899999977
Q ss_pred CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401 (484)
Q Consensus 322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 401 (484)
+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 316 ~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN 395 (436)
T cd07135 316 DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVIN 395 (436)
T ss_pred CCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEEC
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+.+.+...+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus 396 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 396 DTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 8776555678999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-91 Score=732.08 Aligned_cols=431 Identities=24% Similarity=0.351 Sum_probs=402.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 33 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~ 111 (473)
T cd07097 33 RASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGE 111 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999985 999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 112 ~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 188 (473)
T cd07097 112 ALRLSGETL---PSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEA 188 (473)
T ss_pred HHHhcCccc---ccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc
Confidence 877643321 11112345688999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 189 GlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~---dadl~~aa~~ 265 (473)
T cd07097 189 GLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLD---DADLDLAVEC 265 (473)
T ss_pred CCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECC---CCCHHHHHHH
Confidence 99999999999 456889999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. +|++++
T Consensus 266 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 344 (473)
T cd07097 266 AVQGAFF-STGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLV 344 (473)
T ss_pred HHHHHHh-ccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 88999999999999999999999987 478999
Q ss_pred eCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 317 HGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 317 ~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+||... ..|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++
T Consensus 345 ~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l 424 (473)
T cd07097 345 YGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRV 424 (473)
T ss_pred eCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 998653 25789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEE
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~ 441 (484)
++|+|+||+++.+ ..+.+||||+|.||+| +++|.+|+++|++.|+|.
T Consensus 425 ~~g~v~iN~~~~~-~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 425 EAGVVMVNLPTAG-VDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred CcCeEEECCCCCC-CCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 9999999987654 3468999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-91 Score=732.54 Aligned_cols=434 Identities=25% Similarity=0.371 Sum_probs=404.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|+++|++++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus 35 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 114 (475)
T PRK13473 35 EASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGA 114 (475)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999888656999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+.... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 115 ~~~~~g~~~~---~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 191 (475)
T PRK13473 115 ARCLEGKAAG---EYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI 191 (475)
T ss_pred HHHhcCcccc---cCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 7665332211 1112335678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.+..|++|+ +|.|+||||+++|+.|++.++.+++|+++|+|||||+||++ |||+|.|++.+
T Consensus 192 lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~---dADld~Aa~~i 268 (475)
T PRK13473 192 LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFD---DADLDAVVEGI 268 (475)
T ss_pred CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECC---CCCHHHHHHHH
Confidence 99999999999 678899999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C-Ccee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A-DAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~-~~~~ 316 (484)
++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ | ++++
T Consensus 269 ~~~~f~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~ 347 (475)
T PRK13473 269 RTFGYY-NAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVV 347 (475)
T ss_pred HHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999875 5 7999
Q ss_pred eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||... ..|+|+.|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 348 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~ 427 (475)
T PRK13473 348 TGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQY 427 (475)
T ss_pred ECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999764 3588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|++++.+
T Consensus 428 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 428 GCTWVNTHFM--LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred ceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 9999998765 3567999999999999999999999999999998764
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-91 Score=727.64 Aligned_cols=427 Identities=27% Similarity=0.391 Sum_probs=397.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++. |+..++..+++++..
T Consensus 15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 93 (448)
T TIGR01780 15 DQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG-EILYAASFLEWFAEE 93 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999974 999999999998877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+... +....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 94 ~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 170 (448)
T TIGR01780 94 AKRVYGDTI---PSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA 170 (448)
T ss_pred HHHhcCccc---cCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHc
Confidence 766543211 11112335567889999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCC--hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 162 -LDCKAIKVTNGG--VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 162 -lp~g~v~~v~g~--~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+|+|++|+++|+ .+.++.|++|+ +|.|+||||+.+|+.|++.++.++||+++|+|||||+||++ |+|++.|++
T Consensus 171 GlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~---dadl~~aa~ 247 (448)
T TIGR01780 171 GIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD---DADIDQAVE 247 (448)
T ss_pred CCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECC---CCCHHHHHH
Confidence 999999999985 56789999997 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|+++++||||+++||+|+++|.++++++++|+| ++++++||++++.+++++.++|+++.+ |+++
T Consensus 248 ~iv~~~f~-~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~i 326 (448)
T TIGR01780 248 GAMASKFR-NAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKV 326 (448)
T ss_pred HHHHHHHH-hcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999874 7799
Q ss_pred eeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 316 VHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 316 ~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++
T Consensus 327 l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~ 406 (448)
T TIGR01780 327 VTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALE 406 (448)
T ss_pred EeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCC
Confidence 9999754 358899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEK 438 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k 438 (484)
+|.|+||+... ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus 407 ~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 407 YGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred ccEEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 99999998764 3567899999999999999999999999865
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-91 Score=727.39 Aligned_cols=431 Identities=23% Similarity=0.333 Sum_probs=400.2
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus 15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~ 93 (456)
T cd07107 15 AASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GDVMVAAALLDYFAGL 93 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999986 5999999999999876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
...+ .++.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 94 ~~~~-~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~ 169 (456)
T cd07107 94 VTEL-KGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV 169 (456)
T ss_pred HHHh-CCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh
Confidence 6543 3222111 12335678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+ .+.++.|++|+ +|+|.||||+++|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 170 lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~---dadl~~Aa~~i 246 (456)
T cd07107 170 LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFP---DADPEAAADAA 246 (456)
T ss_pred CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECC---CCCHHHHHHHH
Confidence 999999999984 56789999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhh-cccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 240 IGGK-FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 240 ~~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
++++ |. |+||.|++++|||||+++||+|+++|++++.++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 247 ~~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 325 (456)
T cd07107 247 VAGMNFT-WCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLV 325 (456)
T ss_pred HHhchhh-cCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9996 88 99999999999999999999999999999999999999 889999999999999999999998864 67999
Q ss_pred eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 326 ~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~ 405 (456)
T cd07107 326 TGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTAR 405 (456)
T ss_pred eCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHH
Confidence 999642 358999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||++..+ .+.+||||+|.||+|+++|++|+++||+.|+++++
T Consensus 406 ~l~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 406 RVEAGYVWINGSSRH--FLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred hcCcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999987753 56899999999999999999999999999998753
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-91 Score=729.25 Aligned_cols=430 Identities=27% Similarity=0.377 Sum_probs=399.0
Q ss_pred CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++++++|++||+. |++++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++
T Consensus 37 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 116 (476)
T cd07142 37 EGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYA 116 (476)
T ss_pred CCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999975 9999999999999999999999999999999999999999987669999999999998
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+...+.. .+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 117 ~~~~~~~g~~---~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~ 192 (476)
T cd07142 117 GWADKIHGMT---LP-ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAA 192 (476)
T ss_pred HHHHHhcCcc---cc-cCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHH
Confidence 7765543221 11 1112345788999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++ |||++.|
T Consensus 193 ~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~---dADl~~A 269 (476)
T cd07142 193 EAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKA 269 (476)
T ss_pred HcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECC---CCCHHHH
Confidence 99 99999999999 556888999987 9999999999999999999986 8999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus 270 a~~i~~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga 348 (476)
T cd07142 270 VELAHFALFF-NQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGA 348 (476)
T ss_pred HHHHHHHHhc-CCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCC
Confidence 9999999999 99999999999999999999999999999999999999 888999999999999999999998864 67
Q ss_pred ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++++||... .+|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.+++++
T Consensus 349 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~ 428 (476)
T cd07142 349 TLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRA 428 (476)
T ss_pred EEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 999999753 4689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 429 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 429 LKAGTVWVNCYDV--FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred CCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 9999999997653 5678999999999999999999999999999875
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-91 Score=731.94 Aligned_cols=432 Identities=25% Similarity=0.375 Sum_probs=403.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..+++ .|+..+++.++++++.
T Consensus 34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 112 (488)
T TIGR02299 34 RGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAENFRFFADK 112 (488)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999999999999999999999999999999999998 5999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++..+.... ......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 113 ~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 188 (488)
T TIGR02299 113 CEEAMDGRTYP----VDTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEA 188 (488)
T ss_pred HHHhcCCcccc----CCCceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHc
Confidence 87554333211 11234578899999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|+.|+ ||.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 189 GlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~---dAdl~~A~~~ 265 (488)
T TIGR02299 189 GLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFD---DADLERALDA 265 (488)
T ss_pred CcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECC---CCCHHHHHHH
Confidence 99999999998 567788999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++.+||++++.+.+++.++++++.+ |++++
T Consensus 266 i~~~~~~-~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 344 (488)
T TIGR02299 266 VVFMIFS-FNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATIL 344 (488)
T ss_pred HHHHHHh-ccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 888999999999999999999998864 67899
Q ss_pred eCCCcC--------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 317 HGGLLD--------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 317 ~gg~~~--------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++
T Consensus 345 ~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~ 424 (488)
T TIGR02299 345 VGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHR 424 (488)
T ss_pred eCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 998652 248899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+++++.
T Consensus 425 ~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 425 VALALEAGMIWVNSQNV--RHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred HHHhCCcCeEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999998764 3567899999999999999999999999999998763
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-91 Score=726.53 Aligned_cols=433 Identities=29% Similarity=0.428 Sum_probs=402.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+++|+++|.++|++++++|++++++|++++++|+||+..++.. |+..+++.+++++..
T Consensus 15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 93 (456)
T cd07110 15 AATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW-DVDDVAGCFEYYADL 93 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999975 999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++........+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a 173 (456)
T cd07110 94 AEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEA 173 (456)
T ss_pred HHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHc
Confidence 88764221111111122345688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |+|++.|++.
T Consensus 174 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~---dadl~~aa~~ 250 (456)
T cd07110 174 GLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD---DADLEKAVEW 250 (456)
T ss_pred CCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC---CCCHHHHHHH
Confidence 99999999999 556889999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.. |++++
T Consensus 251 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~ 329 (456)
T cd07110 251 AMFGCFW-NNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLL 329 (456)
T ss_pred HHHHHHh-cCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999864 67999
Q ss_pred eCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 317 HGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 317 ~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+||..+ ..|+|+.|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++
T Consensus 330 ~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l 409 (456)
T cd07110 330 CGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEAL 409 (456)
T ss_pred eCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 998763 35889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+++
T Consensus 410 ~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 410 EAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999998653 4678999999999999999999999999999875
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-91 Score=721.39 Aligned_cols=423 Identities=25% Similarity=0.378 Sum_probs=397.8
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMA 87 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 87 (484)
+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++...+++..
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~ 79 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAFLA 79 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999999999999999999999999974 999999999999999888765
Q ss_pred CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccc
Q 038617 88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKA 166 (484)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~ 166 (484)
...... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|.+++.++ +|+|+
T Consensus 80 ~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv 155 (429)
T cd07100 80 DEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV 155 (429)
T ss_pred CeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence 432221 1345678999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred eeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcc
Q 038617 167 IKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245 (484)
Q Consensus 167 v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~ 245 (484)
+|+++|+.+.+..|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+++++|.
T Consensus 156 v~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---daDl~~aa~~i~~~~~~ 232 (429)
T cd07100 156 FQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLD---DADLDKAVKTAVKGRLQ 232 (429)
T ss_pred EEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECC---CCCHHHHHHHHHHHHHh
Confidence 999999667788999987 99999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCCcC-
Q 038617 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGLLD- 322 (484)
Q Consensus 246 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~~~- 322 (484)
|+||.|+++++||||+++||+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |+++++||...
T Consensus 233 -~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~ 311 (429)
T cd07100 233 -NAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPD 311 (429)
T ss_pred -ccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 99999999999999999999999999999999999999 889999999999999999999999864 67899998753
Q ss_pred CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECC
Q 038617 323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402 (484)
Q Consensus 323 ~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 402 (484)
..|+|+.|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+
T Consensus 312 ~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 391 (429)
T cd07100 312 GPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFING 391 (429)
T ss_pred CCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 403 ~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+.. ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 392 ~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 392 MVK--SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCC--CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 764 3677999999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-91 Score=724.74 Aligned_cols=433 Identities=24% Similarity=0.413 Sum_probs=402.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..++..+++++..
T Consensus 14 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 92 (454)
T cd07101 14 QSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEVLDVAIVARYYARR 92 (454)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999986 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
..++.++........ .....+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 93 ~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~a 171 (454)
T cd07101 93 AERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA 171 (454)
T ss_pred HHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence 888876543221111 1235688999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.+..|++| +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 172 glP~gv~~~v~g~~~~~~~~l~~~-~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~---dAdl~~a~~~i 247 (454)
T cd07101 172 GLPRDLWQVVTGPGSEVGGAIVDN-ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLE---DADLDKAAAGA 247 (454)
T ss_pred CcCCCcEEEEeCCcHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECC---CCCHHHHHHHH
Confidence 99999999999 56778889876 69999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.++++++++++++.+ |+++++
T Consensus 248 ~~~~~~-~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~ 326 (454)
T cd07101 248 VRACFS-NAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLA 326 (454)
T ss_pred HHHHHh-cCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999998 889999999999999999999999864 678999
Q ss_pred CCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 318 GGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 318 gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 327 gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~ 406 (454)
T cd07101 327 GGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRA 406 (454)
T ss_pred CCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCc
Confidence 98642 2478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 396 GSLIFNDTLVQ-QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 396 g~v~iN~~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+|+||++..+ ...+.+||||+|.||+|+++|.+|+++||+.|++.
T Consensus 407 G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 407 GTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred ceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 99999987643 24567899999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-91 Score=732.52 Aligned_cols=434 Identities=24% Similarity=0.365 Sum_probs=404.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|++.|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus 65 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 143 (511)
T TIGR01237 65 KASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYARE 143 (511)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999875 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 144 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 220 (511)
T TIGR01237 144 MERLAGQGV---NLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEA 220 (511)
T ss_pred HHHhcCccc---cCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 887754321 11122345678899999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------cccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA------KHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++ ++++|+++|+|||||+||++ |||+
T Consensus 221 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~---dAdl 297 (511)
T TIGR01237 221 GLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDE---SADI 297 (511)
T ss_pred CCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECC---CCCH
Confidence 99999999999 567899999997 999999999999999999887 58899999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++++|. |+||.|++++|||||++++|+|+++|.++++++++|+| ++++++||++++.+++++.++++++.+
T Consensus 298 ~~aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 376 (511)
T TIGR01237 298 EQAVAGAVYSAFG-FTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKA 376 (511)
T ss_pred HHHHHHHHHHHHh-cCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999 889999999999999999999999876
Q ss_pred CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 312 ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 312 ~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++
T Consensus 377 ~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~ 456 (511)
T TIGR01237 377 EGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAA 456 (511)
T ss_pred CCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 66888888653 35899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++|+|+||+...+...+.+||||+|.||+|+ .+|.+++++||+.|+++.+
T Consensus 457 ~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~ 510 (511)
T TIGR01237 457 AEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN 510 (511)
T ss_pred HhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence 9999999999998765455678999999999995 6899999999999998765
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-91 Score=728.23 Aligned_cols=433 Identities=23% Similarity=0.305 Sum_probs=402.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 31 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 109 (478)
T cd07086 31 PASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLG-EVQEMIDICDYAVGL 109 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999874 999999999999888
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 110 ~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 186 (478)
T cd07086 110 SRMLYGLTI---PSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEV 186 (478)
T ss_pred HHHhcCccc---ccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHh
Confidence 776543221 11112335678999999999999999999999999999999999999999999999999999999886
Q ss_pred -----cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 162 -----LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 162 -----lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+|+|++|+++|+.+.++.|.+|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|
T Consensus 187 l~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~---dAdl~~A 263 (478)
T cd07086 187 LEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMD---DADLDLA 263 (478)
T ss_pred hhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcC---CCCHHHH
Confidence 99999999999656888889898 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus 264 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga 342 (478)
T cd07086 264 VRAVLFAAVG-TAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGG 342 (478)
T ss_pred HHHHHHHHHh-ccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 888999999999999999999999874 78
Q ss_pred ceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 314 AIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 314 ~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++++||.... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 343 ~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~ 422 (478)
T cd07086 343 TVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWL 422 (478)
T ss_pred EEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHH
Confidence 9999997643 5889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc--cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 391 SG--TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~--l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++ +++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 423 ~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 423 GPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred hcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 99 99999999987654 457899999999999999999999999999999765
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-91 Score=728.28 Aligned_cols=433 Identities=24% Similarity=0.319 Sum_probs=400.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 112 (478)
T cd07085 34 LATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSI 112 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999997 5999999999998876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+... ++.... ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 113 ~~~~~-g~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~a 189 (478)
T cd07085 113 PHLLK-GEYLEN--VARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEA 189 (478)
T ss_pred HHHhC-Ceeccc--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHh
Confidence 54332 221111 112335688999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 190 GlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~---dADl~~aa~~i 266 (478)
T cd07085 190 GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMP---DADLEQTANAL 266 (478)
T ss_pred CCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECC---CCCHHHHHHHH
Confidence 99999999999778899999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~ 317 (484)
++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. +|+++++
T Consensus 267 ~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~ 345 (478)
T cd07085 267 VGAAFG-AAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVL 345 (478)
T ss_pred HHHHHh-cCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 88999999999999999999999986 4789999
Q ss_pred CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 346 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~ 425 (478)
T cd07085 346 DGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQRE 425 (478)
T ss_pred CCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 98641 3589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEe
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++|+|+||++.. ...+.+||||+|.||+| +++|.+++++||+.|+++..
T Consensus 426 l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 426 VDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred CCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 9999999998753 34577999999999999 47899999999999998764
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-91 Score=726.18 Aligned_cols=432 Identities=22% Similarity=0.292 Sum_probs=396.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 30 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 108 (474)
T cd07130 30 QATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGL-GEVQEMIDICDFAVGL 108 (474)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999999999999999999999999999999999997 5999999999998876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh---
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI--- 158 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l--- 158 (484)
.+.+.+.. . +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 109 ~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~ 185 (474)
T cd07130 109 SRQLYGLT-I--PSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARV 185 (474)
T ss_pred HHHhcCcc-c--cCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHH
Confidence 65443221 1 11112334577899999999999999999999999999999999999999999999999888775
Q ss_pred -ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 -PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 -~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
.++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+++|+.|++.++++++|+++|+|||||+||++ |||++.|
T Consensus 186 ~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~---dadl~~A 262 (474)
T cd07130 186 LEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVME---DADLDLA 262 (474)
T ss_pred HHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECC---CCCHHHH
Confidence 466 89999999999777899999987 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VAD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|++++.++++||| ++++++||++++.+++++.++++++. +|+
T Consensus 263 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 341 (474)
T cd07130 263 VRAVLFAAVG-TAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGG 341 (474)
T ss_pred HHHHHHHHHh-cCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 77889999999999999999999997 478
Q ss_pred ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++++||.. +.+|+|++|||+.++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 342 ~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 420 (474)
T cd07130 342 TVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGP 420 (474)
T ss_pred EEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhh
Confidence 99999975 33589999999998766 99999999999999999999999999999999999999999999999999887
Q ss_pred --cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 393 --TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 393 --l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++|+|+||..+. ...+.+||||+|.||+|+++|++++++|++.|++++.
T Consensus 421 ~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 421 KGSDCGIVNVNIGTS-GAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred cCcceEEEEEcCCCC-CCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 9999999998653 2457899999999999999999999999999998764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-91 Score=732.11 Aligned_cols=433 Identities=25% Similarity=0.356 Sum_probs=405.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 65 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~ 143 (512)
T cd07124 65 KATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYARE 143 (512)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999975 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.. ..... ..+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 144 ~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 219 (512)
T cd07124 144 MLRLRG-FPVEM---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA 219 (512)
T ss_pred HHHhcC-ccccC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence 887732 21111 12346688999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc------ccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~------~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++ |||+
T Consensus 220 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~---daDl 296 (512)
T cd07124 220 GLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDE---DADL 296 (512)
T ss_pred CcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECC---CCCH
Confidence 99999999999 557889999997 9999999999999999999886 6899999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++|+++.+
T Consensus 297 ~~Aa~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~ 375 (512)
T cd07124 297 DEAAEGIVRSAFG-FQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS 375 (512)
T ss_pred HHHHHHHHHHHHh-hCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999999999999999 888999999999999999999999877
Q ss_pred CCceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 312 ADAIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 312 ~~~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
++++++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+
T Consensus 376 g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 455 (512)
T cd07124 376 EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLER 455 (512)
T ss_pred CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHH
Confidence 889999997643 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++||+.|+++++
T Consensus 456 ~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 456 ARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred HHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence 99999999999998876555577999999999999 78899999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=724.01 Aligned_cols=435 Identities=29% Similarity=0.445 Sum_probs=406.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++.++++++.
T Consensus 14 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~ 92 (453)
T cd07099 14 VTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-LEVLLALEAIDWAARN 92 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999776 4999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+.++.+.+.........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~a 172 (453)
T cd07099 93 APRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAA 172 (453)
T ss_pred HHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence 88876543222111113446688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~ 240 (484)
+|+|++|+++|+.+.+..|++|++|.|+||||+++|+.|.+.++++++|+++|+|||||+||++ |||++.|++.++
T Consensus 173 g~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---dadl~~a~~~i~ 249 (453)
T cd07099 173 GPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLA---DADLERAAAAAV 249 (453)
T ss_pred CCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECC---CCCHHHHHHHHH
Confidence 9999999999966888999988899999999999999999999999999999999999999999 999999999999
Q ss_pred HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHG 318 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~g 318 (484)
+++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++|
T Consensus 250 ~~~~~-~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~g 328 (453)
T cd07099 250 WGAMV-NAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTG 328 (453)
T ss_pred HHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeC
Confidence 99999 99999999999999999999999999999999999998 889999999999999999999999864 6789999
Q ss_pred CCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617 319 GLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397 (484)
Q Consensus 319 g~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 397 (484)
|... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.
T Consensus 329 g~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~ 408 (453)
T cd07099 329 GARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGA 408 (453)
T ss_pred CCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeee
Confidence 8764 468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+||+.+.+...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 409 v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 409 VSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred EEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 99999876666789999999999999999999999999999975
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=726.64 Aligned_cols=430 Identities=26% Similarity=0.341 Sum_probs=396.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||+..++...|+..+++.++++++.
T Consensus 34 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 113 (479)
T cd07116 34 RSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGC 113 (479)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 47889999999999999999999999999999999999999999999999999999999998766999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+...... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 114 ~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a 189 (479)
T cd07116 114 IRAQEGSI----SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL 189 (479)
T ss_pred HHHcCCee----ecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH
Confidence 76542211 11112334678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCC------CCHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSP------LDIK 233 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~d------aDl~ 233 (484)
+|+|++|+++| +.+.+..|++|+ ||.|+||||+.+|+.|++.++.+++|+++|+|||||+||++ | ||++
T Consensus 190 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~---da~~~~~adl~ 266 (479)
T cd07116 190 LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFA---DVMDADDAFFD 266 (479)
T ss_pred CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEec---CcccccccCHH
Confidence 99999999999 667899999997 99999999999999999999999999999999999999999 7 7999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV- 311 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~- 311 (484)
.|++.++++ ++ |+||.|++++|||||+++||+|+++|.++++++++|+| ++++.+||++++.+++++.++++++.+
T Consensus 267 ~A~~~i~~~-~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 344 (479)
T cd07116 267 KALEGFVMF-AL-NQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEE 344 (479)
T ss_pred HHHHHHHHH-Hh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC
Confidence 999999986 57 89999999999999999999999999999999999999 888999999999999999999999874
Q ss_pred CCceeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 038617 312 ADAIVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFK 386 (484)
Q Consensus 312 ~~~~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 386 (484)
|+++++||... .+|+|+.|||+.+++ +|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 345 Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a 423 (479)
T cd07116 345 GAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTA 423 (479)
T ss_pred CCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHH
Confidence 67899998653 258899999999874 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 387 KQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 387 ~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 424 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 478 (479)
T cd07116 424 YRMGRGIQAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVS 478 (479)
T ss_pred HHHHHhcCcCeEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 9999999999999997654 457889999999999999999999999999998763
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=722.75 Aligned_cols=435 Identities=27% Similarity=0.373 Sum_probs=404.6
Q ss_pred CCCCHHHHHHHHHHHHHHhHhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 1 MAAAMGEIEDKLAELRQTFRSGI-TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 1 ~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
+.++.+|+++++++|++|++.|+ ++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 14 ~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~ 93 (459)
T cd07089 14 PDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFA 93 (459)
T ss_pred eCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999 99999999999999999999999999999999999998776569999999999999
Q ss_pred HHHHHhhcCccccCc-cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 80 SCLDKWMAPKKRRLP-LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
+.++++......... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~ 173 (459)
T cd07089 94 DLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII 173 (459)
T ss_pred HHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 998887554322111 0112446689999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|
T Consensus 174 ~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~---dadl~~a 250 (459)
T cd07089 174 AETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLD---DADLAAA 250 (459)
T ss_pred HHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEECC---CCCHHHH
Confidence 998 99999999999 455789999997 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VAD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~ 313 (484)
++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++. +|+
T Consensus 251 a~~i~~~~~~-~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga 329 (459)
T cd07089 251 APAAVGVCMH-NAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGA 329 (459)
T ss_pred HHHHHHHHHH-hcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 88899999999999999999999886 478
Q ss_pred ceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 314 AIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 314 ~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++++||..+. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus 330 ~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 409 (459)
T cd07089 330 RLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVA 409 (459)
T ss_pred EEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 9999987543 6899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 410 ~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 410 RRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred HhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 999999999998763 4677899999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=721.58 Aligned_cols=427 Identities=28% Similarity=0.400 Sum_probs=399.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus 15 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 93 (446)
T cd07106 15 VASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF-EVGGAVAWLRYTASL 93 (446)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHhh
Confidence 4788999999999999999999999999999999999999999999999999999999999875 999999999888765
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.. ..... ....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 94 ~~---~~~~~---~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~ 167 (446)
T cd07106 94 DL---PDEVI---EDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV 167 (446)
T ss_pred hh---cCccc---cCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh
Confidence 42 11111 1112445688999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617 162 LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 162 lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~ 240 (484)
+|+|++|+++|+.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.++
T Consensus 168 lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~---dADl~~aa~~iv 244 (446)
T cd07106 168 LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP---DVDIDAVAPKLF 244 (446)
T ss_pred CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECC---CCCHHHHHHHHH
Confidence 99999999999777889999998 99999999999999999999999999999999999999999 999999999999
Q ss_pred HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCceeeC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIVHG 318 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~g 318 (484)
+++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++. +++++++|
T Consensus 245 ~~~~~-~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~g 323 (446)
T cd07106 245 WGAFI-NSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAG 323 (446)
T ss_pred HHHHH-hcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 99999 99999999999999999999999999999999999999 88999999999999999999999886 47899999
Q ss_pred CCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617 319 GLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397 (484)
Q Consensus 319 g~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 397 (484)
|...+ .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 324 g~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~ 403 (446)
T cd07106 324 GEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGT 403 (446)
T ss_pred CCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccE
Confidence 97643 58899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|.
T Consensus 404 v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 404 VWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred EEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99998774 4678999999999999999999999999999875
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-90 Score=721.16 Aligned_cols=432 Identities=25% Similarity=0.352 Sum_probs=399.3
Q ss_pred CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++
T Consensus 17 ~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~ 95 (455)
T cd07148 17 TVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAAD 95 (455)
T ss_pred CCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHH
Confidence 57889999999999999997 56799999999999999999999999999999999999999975 99999999999999
Q ss_pred HHHHhhcCccccCc-cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 81 CLDKWMAPKKRRLP-LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
.++++.+....... ....+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~ 175 (455)
T cd07148 96 ELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLH 175 (455)
T ss_pred HHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHH
Confidence 98877543211110 01123356789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 160 LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
++ +|+|++|+++|+.+.++.|+.|+ +|.|.||||+++|+.|++.++. .+|+++|+|||||+||++ |||++.|++
T Consensus 176 ~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV~~---dADl~~aa~ 251 (455)
T cd07148 176 EAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIVDR---SADLDAMIP 251 (455)
T ss_pred HcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEECC---CCCHHHHHH
Confidence 98 99999999999777889999987 9999999999999999998876 599999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |+++
T Consensus 252 ~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v 330 (455)
T cd07148 252 PLVKGGFY-HAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARL 330 (455)
T ss_pred HHHHHHHh-cCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999874 6789
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
++||... .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++
T Consensus 331 l~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~ 409 (455)
T cd07148 331 LCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDA 409 (455)
T ss_pred EeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCc
Confidence 9998764 478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+|+||+++. ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 410 g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 410 TAVMVNDHTA-FRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CeEEECCCCC-CCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 9999998763 24457899999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-90 Score=719.56 Aligned_cols=428 Identities=25% Similarity=0.355 Sum_probs=399.0
Q ss_pred CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|++.|++||+. |+. ++++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++
T Consensus 15 ~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-Ev~~~i~~l~~~~ 92 (455)
T cd07120 15 DGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF-EISGAISELRYYA 92 (455)
T ss_pred CCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHH
Confidence 57899999999999999985 998 9999999999999999999999999999999999999975 9999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...++..+... . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 93 ~~~~~~~g~~~---~-~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~ 168 (455)
T cd07120 93 GLARTEAGRMI---E-PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILA 168 (455)
T ss_pred HHHHHhcCccc---c-cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHH
Confidence 88876543221 1 1123456889999999999999999999999999999999999999999999999999999999
Q ss_pred c-c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 160 L-Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 160 ~-a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+ + +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++ |+|+|.|
T Consensus 169 ~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~---daDl~~a 245 (455)
T cd07120 169 EIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD---DADLDAA 245 (455)
T ss_pred HhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC---CCCHHHH
Confidence 9 5 99999999998 567889999997 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.++++++++++++.+ ++
T Consensus 246 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga 324 (455)
T cd07120 246 LPKLERALTI-FAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGA 324 (455)
T ss_pred HHHHHHHHHH-hCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999874 67
Q ss_pred ceeeCCCc-C---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 314 AIVHGGLL-D---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 314 ~~~~gg~~-~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
++++||.. + .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus 325 ~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~ 404 (455)
T cd07120 325 EVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRV 404 (455)
T ss_pred EEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 88887753 2 2589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 405 ~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 405 ARAIRAGTVWINDWNK--LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHhcCcceEEECCCCC--CCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 9999999999998765 3567899999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-90 Score=723.22 Aligned_cols=431 Identities=28% Similarity=0.421 Sum_probs=399.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++.. |+..+++.+++++..
T Consensus 28 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~ 106 (465)
T cd07151 28 AASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKANI-EWGAAMAITREAATF 106 (465)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999875 999999999999877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~ 160 (484)
...+.+.. . +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+.+++.+
T Consensus 107 ~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~ 183 (465)
T cd07151 107 PLRMEGRI-L--PSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEE 183 (465)
T ss_pred HHHhcCcc-c--cCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHH
Confidence 65542211 1 1111234567889999999999999999999999999999999999999999999996 689999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++
T Consensus 184 aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~---daDl~~Aa~ 260 (465)
T cd07151 184 AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLE---DADIDAAVN 260 (465)
T ss_pred cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHH
Confidence 8 99999999998 567889999998 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++.+||++++.+++++.++++++.+ |+++
T Consensus 261 ~i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~v 339 (465)
T cd07151 261 AAVFGKFL-HQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATL 339 (465)
T ss_pred HHHHHHHh-cCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999 99999999999999999999999999999999999999 788999999999999999999998864 6789
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 340 l~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~ 417 (465)
T cd07151 340 LVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDA 417 (465)
T ss_pred EecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCc
Confidence 999864 588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+.+.+ ..+.+||||+|.||+|+++|++++++|++.|++++.
T Consensus 418 G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 418 GMTHINDQPVN-DEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred CeEEECCCCCC-CCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999987754 356799999999999999999999999999998764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-90 Score=725.57 Aligned_cols=431 Identities=28% Similarity=0.374 Sum_probs=401.3
Q ss_pred CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA 78 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 78 (484)
.++.+++++++++|++|++ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++...|+..+++.++++
T Consensus 40 ~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~ 119 (481)
T cd07141 40 EGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYY 119 (481)
T ss_pred CCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999998 6999999999999999999999999999999999999999777656999999999999
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
+...+++.+... +. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 120 a~~~~~~~g~~~---~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l 195 (481)
T cd07141 120 AGWADKIHGKTI---PM-DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLI 195 (481)
T ss_pred HHHHHHhcCcee---cC-CCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH
Confidence 988877644221 11 12234678999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++. ++||+++|+|||||+||++ |||++.
T Consensus 196 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~---dADl~~ 272 (481)
T cd07141 196 KEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFA---DADLDY 272 (481)
T ss_pred HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECC---CCCHHH
Confidence 998 99999999999 557788999997 9999999999999999998886 8999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |
T Consensus 273 A~~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 351 (481)
T cd07141 273 AVEQAHEALFF-NMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEG 351 (481)
T ss_pred HHHHHHHHHHh-cCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 888999999999999999999999864 6
Q ss_pred CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus 352 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~ 431 (481)
T cd07141 352 AKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSN 431 (481)
T ss_pred CEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 7999999763 468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 432 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 432 ALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred hcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 99999999998653 56789999999999999999999999999999865
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-90 Score=721.85 Aligned_cols=432 Identities=29% Similarity=0.404 Sum_probs=400.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++.
T Consensus 17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~ 95 (456)
T cd07145 17 SLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV-EVERTIRLFKLAAEE 95 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999985 999999999999987
Q ss_pred HHHhhcCccccCcc--ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 82 LDKWMAPKKRRLPL--LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 82 ~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
.+.+. ++...... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 96 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~ 174 (456)
T cd07145 96 AKVLR-GETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILE 174 (456)
T ss_pred HHHhc-CccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH
Confidence 76432 22111110 0112345678999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|+
T Consensus 175 ~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~~---dAdl~~aa 251 (456)
T cd07145 175 EAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLK---DADLERAV 251 (456)
T ss_pred HcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEECC---CCCHHHHH
Confidence 98 99999999999 567889999997 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. +++
T Consensus 252 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 330 (456)
T cd07145 252 SIAVRGRFE-NAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGK 330 (456)
T ss_pred HHHHHHHHh-ccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999864 678
Q ss_pred eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+++||..+. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++++++
T Consensus 331 vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~ 409 (456)
T cd07145 331 ILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELE 409 (456)
T ss_pred EEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC
Confidence 999987643 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+|+|+||+.+.. ..+.+||||+|.||+|+++|++|+++|++.|+|.
T Consensus 410 ~g~v~vN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 410 AGGVVINDSTRF-RWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred cceEEECCCCCC-CCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 999999987642 3468999999999999999999999999999885
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-90 Score=726.98 Aligned_cols=434 Identities=20% Similarity=0.285 Sum_probs=399.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQD-NEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++ ++++|++++++|+||+..++...|+...++.+++++.
T Consensus 65 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~ 144 (522)
T cd07123 65 YADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVK 144 (522)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999996 8999999999999999999876688889999999998
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...++....... ...+...+++++|+ |||++|+|||||+.+..+++++|| +||+||+|||+.+|.++..|++++.
T Consensus 145 ~~~~~~~~~~~~---~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~ 220 (522)
T cd07123 145 YAEELYAQQPLS---SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILE 220 (522)
T ss_pred HHHHhcCccccC---CCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHH
Confidence 877764432211 11234567899998 999999999999999999999999 6999999999999999999999999
Q ss_pred cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccC------ceeeecCCcCceEEcCCCCCC
Q 038617 160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLT------PVTLELGGKCPAILDTLSSPL 230 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~------~~~lelgG~~p~iV~~~~~da 230 (484)
++ +|+|++|+++|+ .+.++.|+.|+ ||.|+||||+++|+.|++.++++++ |+++|+|||||+||++ ||
T Consensus 221 ~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~---dA 297 (522)
T cd07123 221 EAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHP---SA 297 (522)
T ss_pred HcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECC---CC
Confidence 99 999999999994 56889999997 9999999999999999999998887 8999999999999999 99
Q ss_pred CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhch
Q 038617 231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDP 309 (484)
Q Consensus 231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a 309 (484)
|+|.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++
T Consensus 298 dl~~Aa~~i~~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a 376 (522)
T cd07123 298 DVDSLVTATVRGAFE-YQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHA 376 (522)
T ss_pred CHHHHHHHHHHHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999 8889999999999999999999998
Q ss_pred hc--CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCC-CCceEEEecCCH
Q 038617 310 LV--ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRP-KPLAIYAFTKDE 383 (484)
Q Consensus 310 ~~--~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~a~v~t~d~ 383 (484)
.+ |+++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|++. |||++||||+|.
T Consensus 377 ~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~ 456 (522)
T cd07123 377 KSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDR 456 (522)
T ss_pred HHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCH
Confidence 64 67899998654 3589999999999999999999999999999999994 799999999985 999999999999
Q ss_pred HHHHHHhhcc--ceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617 384 TFKKQIVSGT--SSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 384 ~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 443 (484)
+.+.++++++ ++|+|+||+...+...+.+||||+|.||+| +++|++++++|++.|++...
T Consensus 457 ~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 457 KAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred HHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence 9999999996 599999998776555568999999999996 99999999999999998765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-89 Score=724.45 Aligned_cols=436 Identities=25% Similarity=0.407 Sum_probs=404.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++..++++++.
T Consensus 50 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~ 128 (524)
T PRK09407 50 VSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAF-EEVLDVALTARYYARR 128 (524)
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999986 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+++...... ......+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 129 ~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~ea 207 (524)
T PRK09407 129 APKLLAPRRRAGAL-PVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEA 207 (524)
T ss_pred HHHhhCCccccccC-CCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 88876654321111 11245688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++| +|.|+||||+++|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 208 GlP~gvv~~v~g~~~~~~~~L~~~-~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~---dADl~~Aa~~i 283 (524)
T PRK09407 208 GLPRDLWQVVTGPGPVVGTALVDN-ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLD---DADLDKAAAGA 283 (524)
T ss_pred CCCcccEEEEecCCchHHHHHHhc-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECC---CCCHHHHHHHH
Confidence 99999999999 56788889876 79999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus 284 ~~~~f~-~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~ 362 (524)
T PRK09407 284 VRACFS-NAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLA 362 (524)
T ss_pred HHHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 999999 99999999999999999999999999999999999998 889999999999999999999999864 679999
Q ss_pred CCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 318 GGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 318 gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 363 gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~ 442 (524)
T PRK09407 363 GGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRA 442 (524)
T ss_pred CCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 98642 2478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 396 GSLIFNDTLVQ-QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 396 g~v~iN~~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|.|+||+...+ ...+.+||||+|.||+|+++|.+++++|++.|+|+.++
T Consensus 443 G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 443 GTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred ceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 99999986643 23567899999999999999999999999999998774
|
|
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-90 Score=719.70 Aligned_cols=431 Identities=27% Similarity=0.382 Sum_probs=402.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..+++. |+..+++.++++++.
T Consensus 15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 93 (457)
T cd07090 15 CAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGL 93 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999998875 999999999999987
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.... +... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 94 ~~~~~~-~~~~---~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~a 169 (457)
T cd07090 94 APTLSG-EHVP---LPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEA 169 (457)
T ss_pred HHHhCC-eeec---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHc
Confidence 765422 2111 112446678999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.++.|+.|+ +|+|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 170 GlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---dAdl~~Aa~~i 246 (457)
T cd07090 170 GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD---DADLENAVNGA 246 (457)
T ss_pred CCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECC---CCCHHHHHHHH
Confidence 99999999999777889999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |+++++
T Consensus 247 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~ 325 (457)
T cd07090 247 MMANFL-SQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLC 325 (457)
T ss_pred HHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999874 779999
Q ss_pred CCCcC------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 318 GGLLD------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 318 gg~~~------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
||... ++|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 326 gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~ 405 (457)
T cd07090 326 GGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIA 405 (457)
T ss_pred CCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHH
Confidence 98652 258899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++.+.
T Consensus 406 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 406 QLQAGTCWINTYNI--SPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred hCCcCeEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 99999999998654 457799999999999999999999999999998754
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-90 Score=716.87 Aligned_cols=428 Identities=26% Similarity=0.376 Sum_probs=398.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..++.. |+..+++.+++++..
T Consensus 9 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~ 87 (443)
T cd07152 9 VADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAAIGELHEAAGL 87 (443)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999999999999999999999999998875 999999999999876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~ 160 (484)
..+..+.. .+ ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++ ..+.++|.+
T Consensus 88 ~~~~~~~~---~~-~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ 163 (443)
T cd07152 88 PTQPQGEI---LP-SAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEE 163 (443)
T ss_pred HHHhCCcc---cc-ccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHH
Confidence 65432211 11 11244567899999999999999999999999999999999999999999999996 789999999
Q ss_pred c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 161 Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 161 a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+ +|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 164 ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~---dAdl~~aa~~ 240 (443)
T cd07152 164 AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLD---DADLDLAASN 240 (443)
T ss_pred hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence 8 99999999999778899999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||+++||+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.. |++++
T Consensus 241 i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl 319 (443)
T cd07152 241 GAWGAFL-HQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLE 319 (443)
T ss_pred HHHHHHh-hcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 888999999999999999999999874 77899
Q ss_pred eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
+||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 320 ~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G 397 (443)
T cd07152 320 AGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTG 397 (443)
T ss_pred eccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcC
Confidence 99865 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEE
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~ 441 (484)
+|+||+++.+ ..+.+||||+|.||+| +++|++++++|++.|+++
T Consensus 398 ~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 398 MLHINDQTVN-DEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred eEEECCCCCC-CCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 9999987764 4578999999999999 888999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-90 Score=719.54 Aligned_cols=432 Identities=29% Similarity=0.401 Sum_probs=399.5
Q ss_pred CCCHHHHHHHHHHHHHHhH-hcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR-SGI-TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+ .|+ .+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 40 ~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a 119 (481)
T cd07143 40 EATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYG 119 (481)
T ss_pred CCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999998 599 99999999999999999999999999999999999997765569999999999998
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+...+.. . . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 120 ~~a~~~~g~~-~--~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~ 195 (481)
T cd07143 120 GWADKIHGQV-I--E-TDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIP 195 (481)
T ss_pred HHHHHhcCcc-c--c-CCCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH
Confidence 8776543221 1 1 1123356789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++ |||++.|
T Consensus 196 ~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~---dADl~~A 272 (481)
T cd07143 196 EAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFD---DADLESA 272 (481)
T ss_pred hcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECC---CCCHHHH
Confidence 98 99999999999 457889999997 9999999999999999998885 7899999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VAD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~ 313 (484)
++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. .++
T Consensus 273 a~~i~~~~~~-naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga 351 (481)
T cd07143 273 VVWTAYGIFF-NHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGA 351 (481)
T ss_pred HHHHHHHHHh-ccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCC
Confidence 9999999999 99999999999999999999999999999999999999 88999999999999999999999886 477
Q ss_pred ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++++
T Consensus 352 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~ 431 (481)
T cd07143 352 TVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANA 431 (481)
T ss_pred EEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 999999764 3689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 432 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 432 LKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred cCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 9999999998754 467899999999999999999999999999998753
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-90 Score=717.36 Aligned_cols=430 Identities=28% Similarity=0.408 Sum_probs=399.9
Q ss_pred CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|++++++.|++||+. |+++|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++
T Consensus 15 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~ 93 (454)
T cd07118 15 EGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-GEIEGAADLWRYAA 93 (454)
T ss_pred CCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHH
Confidence 47899999999999999985 9999999999999999999999999999999999999999997 59999999999988
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+++.+... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 94 ~~~~~~~~~~~---~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~ 170 (454)
T cd07118 94 SLARTLHGDSY---NNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLI 170 (454)
T ss_pred HHHHHhcCccc---ccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHH
Confidence 76655432211 111123356789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+++|+.|.+.++.+++|+++|+|||||+||++ |||++.|+
T Consensus 171 ~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~---dAdl~~aa 247 (454)
T cd07118 171 EAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFA---DADLDAAA 247 (454)
T ss_pred hcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECC---CCCHHHHH
Confidence 99 999999999984 56889999997 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++|+++.+ +++
T Consensus 248 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 326 (454)
T cd07118 248 DAVVFGVYF-NAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGAT 326 (454)
T ss_pred HHHHHHHHh-ccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCE
Confidence 999999999 99999999999999999999999999999999999999 888999999999999999999999864 679
Q ss_pred eeeCCCcCC--CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 315 IVHGGLLDK--ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 315 ~~~gg~~~~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+++||.... .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++
T Consensus 327 v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~ 406 (454)
T cd07118 327 LLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARR 406 (454)
T ss_pred EEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHh
Confidence 999997643 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|.|+||+... ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 407 l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 407 IRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred cCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9999999998765 4678999999999999999999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-90 Score=710.56 Aligned_cols=427 Identities=41% Similarity=0.676 Sum_probs=393.8
Q ss_pred HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCC-hhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Q 038617 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKH-PVETYRDEIGLIKKSAKYALSCLDKWMAP 88 (484)
Q Consensus 10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~ea~~~ev~~~~~~~~~~~~~~~~~~~~ 88 (484)
+.+++|++||+.|+++|+.+|.++|++++++|++++++|++++++|+||+ ..++...|+..+++.+++++....++.++
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~ 81 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP 81 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35788999999999999999999999999999999999999999999985 56776569999999999999988877655
Q ss_pred ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCcccee
Q 038617 89 KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK 168 (484)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~ 168 (484)
..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~ 161 (434)
T cd07133 82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA 161 (434)
T ss_pred cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEE
Confidence 42211111123456889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCC
Q 038617 169 VTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN 248 (484)
Q Consensus 169 ~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~ 248 (484)
+++|+.+.++.|+.+++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |+|++.|++.+++++|. |+
T Consensus 162 ~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~---dadl~~aa~~i~~~~~~-~~ 237 (434)
T cd07133 162 VVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAP---DADLAKAAERIAFGKLL-NA 237 (434)
T ss_pred EEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeC---CCCHHHHHHHHHHHHhc-cC
Confidence 999977788888877899999999999999999999999999999999999999999 99999999999999999 99
Q ss_pred CCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCCcC---CC
Q 038617 249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGLLD---KE 324 (484)
Q Consensus 249 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~~~---~~ 324 (484)
||.|++++++|||++++|+|+++|+++++++++|+ ++++++||++++.+++++.++++++.+ |+++++||... .+
T Consensus 238 GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~ 316 (434)
T cd07133 238 GQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAA 316 (434)
T ss_pred CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCC
Confidence 99999999999999999999999999999998876 577899999999999999999999864 77899888653 35
Q ss_pred CCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCc
Q 038617 325 NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTL 404 (484)
Q Consensus 325 g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 404 (484)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.
T Consensus 317 g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 396 (434)
T cd07133 317 TRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTL 396 (434)
T ss_pred CcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred cccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 405 VQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 405 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
.+...+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 397 ~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 397 LHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 5555688999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-90 Score=725.82 Aligned_cols=433 Identities=24% Similarity=0.338 Sum_probs=403.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus 69 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 147 (514)
T PRK03137 69 KATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQ 147 (514)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999985 999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
..++.+.+... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 148 ~~~~~~~~~~~---~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~a 224 (514)
T PRK03137 148 MLKLADGKPVE---SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEA 224 (514)
T ss_pred HHHhcCCcccc---CCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 88775333211 123446688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc------ccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~------~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++ |||+
T Consensus 225 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~---daDl 301 (514)
T PRK03137 225 GLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDE---DADL 301 (514)
T ss_pred CCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECC---CCCH
Confidence 99999999998 567889999997 9999999999999999999886 7899999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++. ++||++++.+++++.++++++.+
T Consensus 302 ~~Aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~ 379 (514)
T PRK03137 302 DLAAESIVASAFG-FSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKE 379 (514)
T ss_pred HHHHHHHHHHHHh-CCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999999999999999 666 99999999999999999999877
Q ss_pred CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 312 ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 312 ~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++++++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++
T Consensus 380 ~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~ 459 (514)
T PRK03137 380 EGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKAR 459 (514)
T ss_pred CCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 78999998754 35899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++|+|+||+...+...+.+||||+|.||+| +++|.+++++||+.|+|...
T Consensus 460 ~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 460 REFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM 513 (514)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence 999999999998766555567999999999999 68899999999999998653
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-90 Score=721.22 Aligned_cols=432 Identities=26% Similarity=0.367 Sum_probs=402.7
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 53 ~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a 132 (494)
T PRK09847 53 RGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYA 132 (494)
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999997 59999999999999999999999999999999999999999886669999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
+..+.+.+... + ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 133 ~~~~~~~g~~~---~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~ 208 (494)
T PRK09847 133 EAIDKVYGEVA---T-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAK 208 (494)
T ss_pred HHHHHhcCccc---c-CCCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH
Confidence 98887754321 1 1123355789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCC-CHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPL-DIKV 234 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~da-Dl~~ 234 (484)
++ +|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.++ .+++|+++|+|||||+||.+ |+ |++.
T Consensus 209 ~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~---daaDl~~ 285 (494)
T PRK09847 209 EAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFA---DCPDLQQ 285 (494)
T ss_pred HcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcC---CccCHHH
Confidence 98 99999999999 667889999997 999999999999999999888 58899999999999999999 97 9999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCC
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVAD 313 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~ 313 (484)
|++.+++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++.+||++++.+++++.++|+++.+.+
T Consensus 286 Aa~~i~~~~~~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G 364 (494)
T PRK09847 286 AASATAAGIFY-NQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG 364 (494)
T ss_pred HHHHHHHHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 88999999999999999999999997655
Q ss_pred ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
++++||.....+.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++
T Consensus 365 ~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l 444 (494)
T PRK09847 365 QLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRL 444 (494)
T ss_pred eEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 88999876556889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+|++.
T Consensus 445 ~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 445 KAGSVFVNNYND--GDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred CcceEEECCCCC--CCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence 999999998654 456789999999999999999999999999998764
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-90 Score=721.78 Aligned_cols=432 Identities=28% Similarity=0.406 Sum_probs=400.7
Q ss_pred CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++++++|++|++. |+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++
T Consensus 41 ~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 120 (484)
T cd07144 41 AAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAG 120 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999996 88999999999999999999999999999999999999877645699999999999998
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
..+++.+.. .. ...+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 121 ~~~~~~g~~-~~---~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ 196 (484)
T cd07144 121 WADKIQGKT-IP---TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKE 196 (484)
T ss_pred HHHHhcCce-ec---CCCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence 887763221 11 11233457889999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++
T Consensus 197 aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~---dADl~~Aa~ 273 (484)
T cd07144 197 AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFE---DADLDQAVK 273 (484)
T ss_pred hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECC---CCCHHHHHH
Confidence 9 99999999999 667889999997 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCc
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADA 314 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~ 314 (484)
.+++++|. |+||.|+++++||||+++||+|+++|++++.+ +++|+| ++++++||++++.+++++.++++++. ++++
T Consensus 274 ~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 352 (484)
T cd07144 274 WAAAGIMY-NSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK 352 (484)
T ss_pred HHHHHHHh-cCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 99999999 99999999999999999999999999999985 788999 88999999999999999999999986 4778
Q ss_pred eeeCCCcCC----CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 315 IVHGGLLDK----ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 315 ~~~gg~~~~----~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
+++||.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++
T Consensus 353 v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~ 432 (484)
T cd07144 353 LVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVA 432 (484)
T ss_pred EEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 999987532 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+++.+
T Consensus 433 ~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 433 RELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HhcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999998754 457799999999999999999999999999998764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=722.16 Aligned_cols=435 Identities=24% Similarity=0.361 Sum_probs=404.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus 51 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 129 (500)
T cd07083 51 KADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARA 129 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999976 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+..+.+...... ...+....++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 130 ~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea 207 (500)
T cd07083 130 ALRLRYPAVEVV--PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA 207 (500)
T ss_pred HHHhcCcccccC--CCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHc
Confidence 887754432111 112445678899999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc------CceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL------TPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~------~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.+++++ +|+++|+|||||+||++ |||+
T Consensus 208 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~---dadl 284 (500)
T cd07083 208 GFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDE---TADF 284 (500)
T ss_pred CCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECC---CCCH
Confidence 99999999999 567889999997 999999999999999999998886 99999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++++|. |+||.|++++++|||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++..
T Consensus 285 ~~aa~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 363 (500)
T cd07083 285 ELVVEGVVVSAFG-FQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKN 363 (500)
T ss_pred HHHHHHHHHHHHh-hcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999999999999999 888999999999999999999999877
Q ss_pred CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 312 ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 312 ~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
++++++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+ |+||||+++|+++|||+++|||+|.+.+.+
T Consensus 364 ~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 443 (500)
T cd07083 364 EGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEE 443 (500)
T ss_pred CCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHH
Confidence 67999998764 358899999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++++|+|+||+.+.+...+.+||||+|.||+| +.+|.+++++|++.|++..+
T Consensus 444 ~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 444 ARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred HHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence 99999999999999876555567999999999999 67899999999999998653
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-90 Score=717.00 Aligned_cols=430 Identities=27% Similarity=0.405 Sum_probs=400.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGI-TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|++++++.|++|++.|. ++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++
T Consensus 15 ~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~ 93 (454)
T cd07109 15 RGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARA-DVEAAARYFEYYGG 93 (454)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHH
Confidence 5789999999999999999876 999999999999999999999999999999999999999974 99999999999988
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
..+++.+... + ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 94 ~~~~~~g~~~---~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~ 169 (454)
T cd07109 94 AADKLHGETI---P-LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEE 169 (454)
T ss_pred HHHHhcCccc---c-cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 8776643221 1 11234678899999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++
T Consensus 170 aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~---daDl~~Aa~ 246 (454)
T cd07109 170 AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFA---DADLEAALP 246 (454)
T ss_pred cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECC---CCCHHHHHH
Confidence 8 99999999999 678899999998 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+|.+++++||++++.+.+++.++++++.+ |++++
T Consensus 247 ~i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l 325 (454)
T cd07109 247 VVVNAIIQ-NAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIV 325 (454)
T ss_pred HHHHHHHh-ccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHHhCCCEEE
Confidence 99999999 99999999999999999999999999999999999999557899999999999999999999864 67899
Q ss_pred eCCCcC----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 317 HGGLLD----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 317 ~gg~~~----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++
T Consensus 326 ~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~ 405 (454)
T cd07109 326 AGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARR 405 (454)
T ss_pred eCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHh
Confidence 988653 2589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|+|+||+...+ ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 406 l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 406 LRAGQVFVNNYGAG-GGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred cCcCeEEECCCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 99999999987633 3568899999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=721.00 Aligned_cols=432 Identities=27% Similarity=0.371 Sum_probs=402.4
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|++++++.|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++
T Consensus 31 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~ 109 (482)
T cd07119 31 EGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTLRESEI-DIDDVANCFRYYA 109 (482)
T ss_pred CCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHH
Confidence 4788999999999999997 599999999999999999999999999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...++..... .. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 110 ~~~~~~~~~~-~~---~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~ 185 (482)
T cd07119 110 GLATKETGEV-YD---VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIE 185 (482)
T ss_pred HHHHHhcCcc-cc---CCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHH
Confidence 8887643322 11 1133456789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++|+ .+.++.|++|+ +|+|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|+
T Consensus 186 ~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~---dADl~~Aa 262 (482)
T cd07119 186 EAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFA---DADFETAV 262 (482)
T ss_pred HcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEECC---CCCHHHHH
Confidence 98 999999999984 45889999997 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|+++++||||+++||+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus 263 ~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~ 341 (482)
T cd07119 263 DQALNGVFF-NAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGAR 341 (482)
T ss_pred HHHHHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999998 888999999999999999999998864 678
Q ss_pred eeeCCCcCC-----CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 315 IVHGGLLDK-----ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 315 ~~~gg~~~~-----~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++||.... .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++
T Consensus 342 v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~ 421 (482)
T cd07119 342 LVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRV 421 (482)
T ss_pred EEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 999986532 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++|+|+||+... ..+.+||||+|.||+|+++|++|+++||+.|+++...
T Consensus 422 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 422 ARRLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred HHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999998643 4678999999999999999999999999999998764
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-90 Score=716.98 Aligned_cols=432 Identities=27% Similarity=0.413 Sum_probs=401.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.++++++++.|++|++.|+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.+++++..
T Consensus 15 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~ 94 (453)
T cd07115 15 QASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGW 94 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999766999999999998876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.++..+.. .+ ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 95 ~~~~~g~~---~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a 170 (453)
T cd07115 95 ADKIEGEV---IP-VRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEA 170 (453)
T ss_pred HHHhcCce---ec-CCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 65543211 11 112345688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++.++||+++|+|||||+||++ |||++.|++.
T Consensus 171 GlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~---dAdl~~aa~~ 247 (453)
T cd07115 171 GFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFA---DADLDAAVRA 247 (453)
T ss_pred CcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECC---CCCHHHHHHH
Confidence 99999999999 556889999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++|+++.. |++++
T Consensus 248 i~~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~ 326 (453)
T cd07115 248 AATGIFY-NQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLL 326 (453)
T ss_pred HHHHHHh-ccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999998864 67899
Q ss_pred eCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 327 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~ 406 (453)
T cd07115 327 TGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKA 406 (453)
T ss_pred eCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCc
Confidence 9987543 688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus 407 G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 407 GTVWINTYNR--FDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred cEEEECCCCC--CCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999998653 467899999999999999999999999999998653
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-90 Score=719.29 Aligned_cols=427 Identities=29% Similarity=0.415 Sum_probs=397.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus 31 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~ 110 (467)
T TIGR01804 31 EATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGL 110 (467)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999556999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.++..+.. . .. ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++
T Consensus 111 ~~~~~~~~-~--~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~a 186 (467)
T TIGR01804 111 ADKDGGEI-I--PL-PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEA 186 (467)
T ss_pred HHHhCCcc-c--cC-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHc
Confidence 77643221 1 11 11234578999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+ .+.++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 187 glP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~---dADl~~Aa~~ 263 (467)
T TIGR01804 187 GLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFD---DADLELAVDQ 263 (467)
T ss_pred CcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECC---CCCHHHHHHH
Confidence 999999999984 77889999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.. +++++
T Consensus 264 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl 342 (467)
T TIGR01804 264 AMNGNFF-SAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLA 342 (467)
T ss_pred HHHHHHH-hcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999998864 67899
Q ss_pred eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||..+ .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus 343 ~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~ 422 (467)
T TIGR01804 343 CGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVAN 422 (467)
T ss_pred eCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 998653 258899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEK 438 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k 438 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 423 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 423 QLKAGTVWINDFHP--YPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999998654 4567899999999999999999999999865
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-90 Score=723.58 Aligned_cols=435 Identities=21% Similarity=0.271 Sum_probs=400.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQ-DNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++|+++|++||+.|+++|..+|.++|++++++|+ +++++|+++++.|+||++.++...++..+++.+++++.
T Consensus 65 ~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~ 144 (533)
T TIGR01236 65 NATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVK 144 (533)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999 59999999999999999999976459999999999998
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
..+++.+... .....+...++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|.++..|++++.
T Consensus 145 ~a~~~~~~~~---~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~ 220 (533)
T TIGR01236 145 YARELYEQQP---SESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILE 220 (533)
T ss_pred HHHHhcCccc---cCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHH
Confidence 8776643321 0111234568899999 999999999999999999999999 7999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCc------eeeecCCcCceEEcCCCCCC
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTP------VTLELGGKCPAILDTLSSPL 230 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~------~~lelgG~~p~iV~~~~~da 230 (484)
++ +|+|++|+++| +.+.++.|+.|+ ||.|+||||+++|+.|++.++++++| +++|+|||||+||++ ||
T Consensus 221 ~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~---dA 297 (533)
T TIGR01236 221 EAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHP---SA 297 (533)
T ss_pred hcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECC---CC
Confidence 99 99999999999 578899999997 99999999999999999999998874 999999999999999 99
Q ss_pred CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhch
Q 038617 231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDP 309 (484)
Q Consensus 231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a 309 (484)
|++.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++
T Consensus 298 Dl~~Aa~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a 376 (533)
T TIGR01236 298 DIDHAVTATIRGAFE-YQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERA 376 (533)
T ss_pred CHHHHHHHHHHHHHh-hCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999 8889999999999999999999998
Q ss_pred hc-C--CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHH-hcCCCCceEEEecCC
Q 038617 310 LV-A--DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFI-NSRPKPLAIYAFTKD 382 (484)
Q Consensus 310 ~~-~--~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d 382 (484)
.+ + +++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++ |+++|||++||||+|
T Consensus 377 ~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d 456 (533)
T TIGR01236 377 KGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKD 456 (533)
T ss_pred HhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCC
Confidence 75 3 5899998754 3589999999999999999999999999999999998 59999999 889999999999999
Q ss_pred HHHHHHHhhccc--eeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617 383 ETFKKQIVSGTS--SGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 383 ~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 444 (484)
.+.+.+++++++ +|+|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|++....
T Consensus 457 ~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 457 RQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred HHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence 999999999977 99999998776555578999999999998 999999999999999987764
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=715.70 Aligned_cols=438 Identities=30% Similarity=0.496 Sum_probs=403.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 14 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~ 93 (465)
T cd07098 14 ADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKH 93 (465)
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999777999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh---
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI--- 158 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l--- 158 (484)
.+.+.................+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~ 173 (465)
T cd07098 94 GEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIREC 173 (465)
T ss_pred HHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHH
Confidence 77655432211111011234578899999999999999999999999999999999999999999999999877665
Q ss_pred -ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 -PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 -~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
.++ +|+|++|+++|+.+.++.|+.|+ ||.|.||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|
T Consensus 174 l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~---dadl~~a 250 (465)
T cd07098 174 LAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLD---DADLDQI 250 (465)
T ss_pred HHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECC---CCCHHHH
Confidence 466 99999999999668899999997 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. |+
T Consensus 251 ~~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 329 (465)
T cd07098 251 ASIIMRGTFQ-SSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGA 329 (465)
T ss_pred HHHHHHHHHh-cCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999998864 78
Q ss_pred ceeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 314 AIVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 314 ~~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.+.+++
T Consensus 330 ~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~ 409 (465)
T cd07098 330 RLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARR 409 (465)
T ss_pred EEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 999988542 258999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++++|.|+||....+...+.+||||+|.||+|+++|.+++++|++.|++.++
T Consensus 410 ~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 410 IASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred HHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 9999999999999876555567899999999999999999999999999998764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=718.47 Aligned_cols=430 Identities=27% Similarity=0.352 Sum_probs=401.3
Q ss_pred CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++++++|++|++. |+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..++..+++++
T Consensus 32 ~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~ 111 (471)
T cd07139 32 EATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYA 111 (471)
T ss_pred CCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999985 9999999999999999999999999999999999999998876669999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+++...+.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 112 ~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~ 188 (471)
T cd07139 112 ALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAE 188 (471)
T ss_pred HHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHH
Confidence 88877643332111 123456789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 160 LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
++ +|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++
T Consensus 189 ~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~---dADl~~aa~ 265 (471)
T cd07139 189 EAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLD---DADLDAAVP 265 (471)
T ss_pred HcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECC---CCCHHHHHH
Confidence 99 99999999999777889999997 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~ 315 (484)
.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++. +++++
T Consensus 266 ~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v 344 (471)
T cd07139 266 GLVPASLM-NNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARL 344 (471)
T ss_pred HHHHHHHh-cCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 88899999999999999999999876 46799
Q ss_pred eeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 316 VHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 316 ~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++||..+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+++++
T Consensus 345 ~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~ 424 (471)
T cd07139 345 VTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARR 424 (471)
T ss_pred EeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 99987532 488999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|+|+||++. ..+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 425 l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 425 IRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred CCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 999999999865 3578999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-89 Score=714.57 Aligned_cols=430 Identities=24% Similarity=0.374 Sum_probs=402.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus 14 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~~~~~~~~ 92 (452)
T cd07102 14 LASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGMLERARYMISI 92 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999987 5999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+..... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|.+++.++
T Consensus 93 ~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a 169 (452)
T cd07102 93 AEEALADIRVP---EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEA 169 (452)
T ss_pred HHHhcCCcccC---CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 88775543211 112345678999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 170 GlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~---dADl~~aa~~i 246 (452)
T cd07102 170 GLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRP---DADLDAAAESL 246 (452)
T ss_pred CCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcC---CCCHHHHHHHH
Confidence 99999999999668899999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|+ |+||.|++++++|||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++.. ++++++
T Consensus 247 ~~~~~~-~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~ 325 (452)
T cd07102 247 VDGAFF-NSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALI 325 (452)
T ss_pred HHHHHH-hCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 888999999999999999999998864 678999
Q ss_pred CCCc----CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 318 GGLL----DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 318 gg~~----~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
||.. +..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++
T Consensus 326 gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l 405 (452)
T cd07102 326 DGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQL 405 (452)
T ss_pred CCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHc
Confidence 9864 236899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 406 ~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 406 ETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred CcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 999999998764 4577899999999999999999999999999875
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=718.01 Aligned_cols=433 Identities=24% Similarity=0.394 Sum_probs=401.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 33 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~ 111 (478)
T cd07131 33 LSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGE 111 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999974 999999999999888
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+...... . .....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 112 ~~~~~~~~-~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a 188 (478)
T cd07131 112 GRRLFGET-V--PSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEA 188 (478)
T ss_pred HHHhCCcc-c--ccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhc
Confidence 77643221 1 11112235678999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 189 GlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---dADl~~Aa~~ 265 (478)
T cd07131 189 GLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMD---DADLDLALEG 265 (478)
T ss_pred CcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999 556889999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus 266 i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~ 344 (478)
T cd07131 266 ALWSAFG-TTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLL 344 (478)
T ss_pred HHHHHHh-cCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 888999999999999999999999874 77899
Q ss_pred eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++
T Consensus 345 ~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~ 424 (478)
T cd07131 345 LGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARR 424 (478)
T ss_pred eCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHH
Confidence 998652 358999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||+++.+ ..+.+||||+|.||+| +++|.+|+++||+.|+|+++
T Consensus 425 ~l~~G~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 425 DLEAGITYVNAPTIG-AEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred hcCccEEEECCCCCC-CCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 999999999987654 4578999999999999 77899999999999999764
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-89 Score=717.98 Aligned_cols=430 Identities=29% Similarity=0.413 Sum_probs=399.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcC--CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|++.++++|++|+++|+ +++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 37 ~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a 116 (476)
T cd07091 37 EADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYA 116 (476)
T ss_pred CCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999855 99999999999999999999999999999999999987776669999999999998
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...++..+.. . . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 117 ~~~~~~~~~~-~--~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~ 192 (476)
T cd07091 117 GWADKIQGKT-I--P-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIK 192 (476)
T ss_pred HHHHHhcCcc-c--c-CCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH
Confidence 7766543321 1 1 1123456789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++ |||++.|
T Consensus 193 ~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~---dADl~~A 269 (476)
T cd07091 193 EAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFD---DADLDKA 269 (476)
T ss_pred HcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECC---CCCHHHH
Confidence 99 99999999998 567888999987 9999999999999999999987 8899999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. |+
T Consensus 270 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga 348 (476)
T cd07091 270 VEWAAFGIFF-NQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGA 348 (476)
T ss_pred HHHHHHHHHh-ccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999998874 67
Q ss_pred ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++
T Consensus 349 ~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~ 428 (476)
T cd07091 349 TLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRA 428 (476)
T ss_pred EEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 999998764 4689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 429 l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 429 LKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred cCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 9999999998654 5678999999999999999999999999999875
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-89 Score=714.38 Aligned_cols=430 Identities=26% Similarity=0.374 Sum_probs=401.1
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|++++++.|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 20 ~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~ 99 (462)
T cd07112 20 ACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYA 99 (462)
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999998 49999999999999999999999999999999999999999987569999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+++.+... + ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 100 ~~~~~~~~~~~---~-~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~ 175 (462)
T cd07112 100 EAIDKVYGEVA---P-TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELAL 175 (462)
T ss_pred HHHHHhcCcee---c-CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHH
Confidence 99887654321 1 1123456789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCC-CHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPL-DIKV 234 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~da-Dl~~ 234 (484)
++ +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++ .++||+++|+||+||+||++ |+ |++.
T Consensus 176 ~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~---da~dl~~ 252 (462)
T cd07112 176 EAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFA---DAPDLDA 252 (462)
T ss_pred hcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECC---CCcCHHH
Confidence 99 99999999999 567889999987 999999999999999999888 48999999999999999999 99 9999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cC
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VA 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~ 312 (484)
|++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. .|
T Consensus 253 aa~~i~~~~~~-~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G 331 (462)
T cd07112 253 AAEAAAAGIFW-NQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEG 331 (462)
T ss_pred HHHHHHHHHHh-ccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 88999999999999999999999987 47
Q ss_pred CceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 313 DAIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 313 ~~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++++||.... +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++
T Consensus 332 a~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~ 411 (462)
T cd07112 332 ARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRV 411 (462)
T ss_pred CEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHH
Confidence 78999986532 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 412 ~~~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 412 ARRLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred HHhcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 9999999999998654 4678999999999999999999999999999875
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-89 Score=716.27 Aligned_cols=425 Identities=29% Similarity=0.435 Sum_probs=398.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 32 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~ 111 (466)
T cd07138 32 LGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADA 111 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 47889999999999999999999999999999999999999999999999999999999988756999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.... .....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 112 ~~~~~~~~--------~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a 183 (466)
T cd07138 112 LKDFEFEE--------RRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEA 183 (466)
T ss_pred hhhccccc--------cCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHc
Confidence 76653321 1224567899999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|.+.++.+++|+++|+|||||+||++ |||++.|++.
T Consensus 184 GlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~---dADl~~aa~~ 260 (466)
T cd07138 184 GLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILD---DADLEKAVPR 260 (466)
T ss_pred CCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECC---CCCHHHHHHH
Confidence 99999999998 456889999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|++.|++++.++++||| ++++++||++++.+.+++.++++++.+ |++++
T Consensus 261 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l 339 (466)
T cd07138 261 GVAACFA-NSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLV 339 (466)
T ss_pred HHHHHHh-ccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999998864 77899
Q ss_pred eCCCcC----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 317 HGGLLD----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 317 ~gg~~~----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+++++
T Consensus 340 ~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~ 419 (466)
T cd07138 340 AGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARR 419 (466)
T ss_pred eCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 998632 2589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|+|+||+.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 420 l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 420 LRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred cCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999853 3678999999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-89 Score=714.13 Aligned_cols=429 Identities=27% Similarity=0.397 Sum_probs=400.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+++++.|+|||..++.. |+..+++.+++++..
T Consensus 17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 95 (451)
T cd07150 17 VGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF-ETTFTPELLRAAAGE 95 (451)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999875 999999999999888
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++..... +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 96 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~a 172 (451)
T cd07150 96 CRRVRGETL---PSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA 172 (451)
T ss_pred HHHhcCccc---cCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHh
Confidence 766532211 11112345678999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.+..|+.|+ +|+|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 173 g~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~---dadl~~aa~~ 249 (451)
T cd07150 173 GLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLA---DADLDYAVRA 249 (451)
T ss_pred CCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECC---CCChHHHHHH
Confidence 99999999998 567889999987 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.. |++++
T Consensus 250 i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl 328 (451)
T cd07150 250 AAFGAFM-HQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLL 328 (451)
T ss_pred HHHHHHh-hcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 788999999999999999999999864 67899
Q ss_pred eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
+||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 329 ~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G 406 (451)
T cd07150 329 TGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESG 406 (451)
T ss_pred eCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcC
Confidence 98864 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+|+||+++.+ ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 407 ~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 407 MVHINDPTIL-DEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred EEEECCCCCC-CCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 9999998754 4578999999999999999999999999999885
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-89 Score=704.13 Aligned_cols=428 Identities=43% Similarity=0.737 Sum_probs=397.7
Q ss_pred HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89 (484)
Q Consensus 10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 89 (484)
+++++|++||+.|+++|.++|.++|.+++++|++++++|+++++.|+||+..++...|+..+++.+++++.....+....
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 67899999999999999999999999999999999999999999999999999875699999999999998877665543
Q ss_pred cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617 90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV 169 (484)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~ 169 (484)
....+....+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.+++|+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~ 161 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV 161 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence 22111112244568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617 170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG 249 (484)
Q Consensus 170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G 249 (484)
++|+.+.+..|++|++|.|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.+++++|. ++|
T Consensus 162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~---dAD~~~aa~~i~~~~~~-~~G 237 (433)
T cd07134 162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDE---TADLKKAAKKIAWGKFL-NAG 237 (433)
T ss_pred EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECC---CCCHHHHHHHHHHHhhc-CcC
Confidence 99987888999999999999999999999999999999999999999999999999 99999999999999999 999
Q ss_pred CccccCCceEEccchHHHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhchh-cCCceeeCCCcCCCCC
Q 038617 250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPL-VADAIVHGGLLDKENL 326 (484)
Q Consensus 250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~gg~~~~~g~ 326 (484)
|.|++++++|||++++|+|+++|+++++++.+++| +.++++||++++.+.+++.++++++. +++++++||..+.+|+
T Consensus 238 Q~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~ 317 (433)
T cd07134 238 QTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQR 317 (433)
T ss_pred CcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999988874 77889999999999999999999986 4789999997766689
Q ss_pred eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccc
Q 038617 327 FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQ 406 (484)
Q Consensus 327 ~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 406 (484)
|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+.+
T Consensus 318 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 397 (433)
T cd07134 318 YIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLH 397 (433)
T ss_pred EEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987765
Q ss_pred cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 407 QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 407 ~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
...+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus 398 ~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 398 FLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred cCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 45678999999999999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-89 Score=713.08 Aligned_cols=430 Identities=25% Similarity=0.390 Sum_probs=399.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 31 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 109 (468)
T cd07088 31 AATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEW 109 (468)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999974 999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.++..+.. .+....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 110 a~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~a 186 (468)
T cd07088 110 ARRIEGEI---IPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEA 186 (468)
T ss_pred HHHhCCcc---ccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 76543221 111112345678899999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+ .+.++.|++|+ +|+|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 187 glP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~---dadl~~aa~~ 263 (468)
T cd07088 187 GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMK---DADLDLAVKA 263 (468)
T ss_pred CcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence 999999999994 45788999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++.+||++++.+++++.++++++.+ +++++
T Consensus 264 iv~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl 342 (468)
T cd07088 264 IVDSRII-NCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLL 342 (468)
T ss_pred HHHHHhc-ccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 888999999999999999999999864 78999
Q ss_pred eCCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 317 HGGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 317 ~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++
T Consensus 343 ~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~ 422 (468)
T cd07088 343 TGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELE 422 (468)
T ss_pred eCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC
Confidence 999754 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+|+|+||++..+ ....||||+|.||+|+++|++|+++||+.|+++
T Consensus 423 ~g~v~iN~~~~~--~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 423 FGETYINRENFE--AMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred cceEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999987753 345699999999999999999999999999885
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-89 Score=710.84 Aligned_cols=431 Identities=26% Similarity=0.382 Sum_probs=398.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..++..+++++..
T Consensus 17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 95 (452)
T cd07147 17 LAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG-EVARAIDTFRIAAEE 95 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999975 999999999999988
Q ss_pred HHHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
+.++.+.... .......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ 175 (452)
T cd07147 96 ATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAE 175 (452)
T ss_pred HHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 8766432211 011111233567889999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 161 Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 161 a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+ +|+|++|+++|+.+.+..|+.|+ +|.|+||||+.+|+.|.+.++. +|+++|+|||||+||++ |||++.|++.
T Consensus 176 ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV~~---dadl~~aa~~ 250 (452)
T cd07147 176 TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIVDS---DADLDFAAQR 250 (452)
T ss_pred cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEECC---CCCHHHHHHH
Confidence 8 99999999999777889999887 9999999999999999998763 79999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++.+||++++.+++++.++++++.+ |++++
T Consensus 251 i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l 329 (452)
T cd07147 251 IIFGAFY-QAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLL 329 (452)
T ss_pred HHHHHHh-ccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 888999999999999999999999864 67899
Q ss_pred eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
+||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 330 ~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G 407 (452)
T cd07147 330 TGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVG 407 (452)
T ss_pred ecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcc
Confidence 99865 4889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
+|+||+.+.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 408 ~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 408 GVVINDVPTF-RVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred eEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 9999987642 35679999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-89 Score=713.28 Aligned_cols=431 Identities=23% Similarity=0.332 Sum_probs=396.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++.
T Consensus 33 ~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 111 (487)
T PRK09457 33 DATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT-EVTAMINKIAISIQA 111 (487)
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999974 999999999998888
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+.++.++.. . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 112 ~~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~a 187 (487)
T PRK09457 112 YHERTGEKR---S-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA 187 (487)
T ss_pred HHHhcCcee---c-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 776654322 1 112345688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc-cCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH-LTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~-~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+.+.++.|++|+ +|.|+||||+++|+.|++.++.+ .+++++|+|||||+||++ |||++.|++.
T Consensus 188 GlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~---dADl~~aa~~ 264 (487)
T PRK09457 188 GLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDE---VADIDAAVHL 264 (487)
T ss_pred CcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999878899999997 99999999999999999987755 578899999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchH-HHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFA-ATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+++++|. |+||.|++++|||||+++| |+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus 265 i~~~~f~-~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 343 (487)
T PRK09457 265 IIQSAFI-SAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGK 343 (487)
T ss_pred HHHHHhh-ccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 9999999 9999999999999999998 9999999999999999998 467899999999999999999999875 788
Q ss_pred eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+++||.. +.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 344 ~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l 422 (487)
T PRK09457 344 SLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEI 422 (487)
T ss_pred EEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 8888754 345799999999 79999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++|+|+||+...+ ..+.+||||+|.||+|+++|..+ .+|++.|+++.+.
T Consensus 423 ~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 423 RAGIVNWNKPLTG-ASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred CcceEEEECCCCC-CCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence 9999999987654 45679999999999999999555 5599999988774
|
|
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-88 Score=708.51 Aligned_cols=431 Identities=26% Similarity=0.378 Sum_probs=400.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus 15 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~ 94 (450)
T cd07092 15 DASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGA 94 (450)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999877656999999999999877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+.... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|.++|.+.
T Consensus 95 ~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~g 171 (450)
T cd07092 95 ARTLEGPAAG---EYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAEV 171 (450)
T ss_pred HHHhcCcccC---ccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHhc
Confidence 6654322110 1112335678999999999999999999999999999999999999999999999999999999889
Q ss_pred cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+ .+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 172 lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~---dAdl~~aa~~i 248 (450)
T cd07092 172 LPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFD---DADLDAAVAGI 248 (450)
T ss_pred CCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECC---CCCHHHHHHHH
Confidence 999999999984 45889999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCceeeC
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAIVHG 318 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~g 318 (484)
++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.+++++++|
T Consensus 249 v~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ga~~~~g 327 (450)
T cd07092 249 ATAGYY-NAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTG 327 (450)
T ss_pred HHHHHh-hCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHcCCEEEeC
Confidence 999999 99999999999999999999999999999999999999 8889999999999999999999988777899999
Q ss_pred CCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617 319 GLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397 (484)
Q Consensus 319 g~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 397 (484)
|... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 328 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~ 407 (450)
T cd07092 328 GRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGT 407 (450)
T ss_pred CCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccE
Confidence 9753 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+||+... ..+.+||||+|.||+|+++|++++++|++.|++.
T Consensus 408 v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 408 VWVNTHIP--LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred EEECCCCC--CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 99998765 3678999999999999999999999999999874
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-89 Score=710.32 Aligned_cols=429 Identities=27% Similarity=0.391 Sum_probs=396.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh-hhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP-VETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+||+. .+++ .|+..+++.+++++.
T Consensus 15 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ev~~~~~~~~~~~~ 93 (457)
T cd07108 15 RSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-PEAAVLADLFRYFGG 93 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-HHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999997 5776 599999999998887
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
....+. +.... ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 94 ~~~~~~-~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~ 169 (457)
T cd07108 94 LAGELK-GETLP---FGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQ 169 (457)
T ss_pred HHHHhC-Cceec---cCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 665432 22111 11233457889999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 161 YLDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 161 alp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
++|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 170 ~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~---dAdl~~Aa~~ 246 (457)
T cd07108 170 VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFP---DADLDDAVDG 246 (457)
T ss_pred hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECC---CCCHHHHHHH
Confidence 999999999998 567889999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhh-cccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc--CCc
Q 038617 239 IIGGK-FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV--ADA 314 (484)
Q Consensus 239 i~~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~--~~~ 314 (484)
+++++ |. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ +++
T Consensus 247 iv~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~ 325 (457)
T cd07108 247 AIAGMRFT-RQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGAT 325 (457)
T ss_pred HHHhhHhh-cCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCE
Confidence 99995 99 99999999999999999999999999999999999999 888999999999999999999998854 789
Q ss_pred eeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 315 IVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 315 ~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus 326 vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~ 405 (457)
T cd07108 326 VLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRA 405 (457)
T ss_pred EEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHH
Confidence 99998753 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHH-HHHhhhccEEE
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYS-FETFSHEKAIM 441 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~-~~~f~~~k~v~ 441 (484)
++++++|.|+||++.. ..+.+||||+|.||+|+++|.++ +++||+.|+++
T Consensus 406 ~~~l~~g~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 406 AHALEAGWVQVNQGGG--QQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred HHhcCcceEEECCCCC--CCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 9999999999999864 36789999999999999999977 69999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-88 Score=709.38 Aligned_cols=431 Identities=27% Similarity=0.398 Sum_probs=398.7
Q ss_pred CCCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 1 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
+.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++.
T Consensus 16 ~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~ 94 (453)
T cd07094 16 PADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV-EVDRAIDTLRLAAE 94 (453)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999974 99999999999999
Q ss_pred HHHHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 81 CLDKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
.++++.+.... .......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~ 174 (453)
T cd07094 95 EAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILV 174 (453)
T ss_pred HHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH
Confidence 88877532211 00000123356788999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++|+ .+.++.|++|+ +|.|+||||+++|+.|.+.+ +++|+++|+|||||+||++ |||++.|+
T Consensus 175 ~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV~~---dadl~~aa 249 (453)
T cd07094 175 EAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIVDR---DADLDAAI 249 (453)
T ss_pred HcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEECC---CCCHHHHH
Confidence 98 999999999994 56689999997 99999999999999999987 6799999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus 250 ~~i~~~~~~-~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~ 328 (453)
T cd07094 250 EALAKGGFY-HAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGAR 328 (453)
T ss_pred HHHHHHHHH-hcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 888999999999999999999999864 678
Q ss_pred eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+++||.. +|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++
T Consensus 329 v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~ 406 (453)
T cd07094 329 LLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLE 406 (453)
T ss_pred EEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcC
Confidence 9998864 58899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+|+|+||++... ..+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 407 ~g~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 407 VGGVMVNDSSAF-RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred cCeEEEcCCCCC-CCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 999999998642 4578999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=708.55 Aligned_cols=418 Identities=25% Similarity=0.358 Sum_probs=391.2
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.++++...
T Consensus 55 ~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~ 134 (480)
T cd07111 55 QAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGW 134 (480)
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999998756898888888777655
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+... .....++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 135 ~~~~~--------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a 200 (480)
T cd07111 135 AQLLD--------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA 200 (480)
T ss_pred HHHhc--------------CCcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 44221 1234589999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |+|++.|++.+
T Consensus 201 GlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~---daDl~~aa~~i 277 (480)
T cd07111 201 GLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFD---DADLDSAVEGI 277 (480)
T ss_pred CCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECC---CCCHHHHHHHH
Confidence 99999999999667889999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. +++++.
T Consensus 278 ~~~~f~-~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~ 356 (480)
T cd07111 278 VDAIWF-NQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQ 356 (480)
T ss_pred HHHHHh-cCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999864 678888
Q ss_pred CCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 318 GGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 318 gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
||.. +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|
T Consensus 357 gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG 436 (480)
T cd07111 357 PGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAG 436 (480)
T ss_pred CCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEe
Confidence 8754 446899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 437 ~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 437 VVWINGHNL--FDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred eEEECCCCC--CCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 999998765 45678999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=701.92 Aligned_cols=422 Identities=23% Similarity=0.347 Sum_probs=390.6
Q ss_pred HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 038617 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM 86 (484)
Q Consensus 7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~ 86 (484)
|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..++..+++++....++.
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~ 79 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHERT 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999999999999999999999999999999999999999999974 99999999999998887775
Q ss_pred cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCcc
Q 038617 87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCK 165 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g 165 (484)
..... ...+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus 80 ~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g 155 (431)
T cd07095 80 GERAT----PMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPG 155 (431)
T ss_pred CCccc----CCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChh
Confidence 43321 112446788999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc-cCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhh
Q 038617 166 AIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH-LTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGK 243 (484)
Q Consensus 166 ~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~-~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~ 243 (484)
++|+++|+.+.+..|++|+ +|.|.||||+++|+.|++.++.+ ++++++|+|||||+||++ |||++.|++.+++++
T Consensus 156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~---daDl~~aa~~i~~~~ 232 (431)
T cd07095 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWD---VADIDAAAYLIVQSA 232 (431)
T ss_pred HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECC---CCCHHHHHHHHHHHH
Confidence 9999999777889999998 99999999999999999987654 699999999999999999 999999999999999
Q ss_pred cccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCC
Q 038617 244 FASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGL 320 (484)
Q Consensus 244 ~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~ 320 (484)
|. |+||.|+++++||||++ ++|+|+++|++++.++++|+| ++++.+||++++.+++++.++++++.+ |+++++||.
T Consensus 233 ~~-~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~ 311 (431)
T cd07095 233 FL-TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAME 311 (431)
T ss_pred HH-hCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCC
Confidence 99 99999999999999999 999999999999999999999 778999999999999999999999875 788999986
Q ss_pred c-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEE
Q 038617 321 L-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLI 399 (484)
Q Consensus 321 ~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~ 399 (484)
. +.+|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 312 ~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~ 390 (431)
T cd07095 312 RLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVN 390 (431)
T ss_pred cCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEE
Confidence 4 346899999999 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617 400 FNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 400 iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
||++... ..+.+||||+|.||+|+++|.+|++.|+ .|++
T Consensus 391 iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~ 429 (431)
T cd07095 391 WNRPTTG-ASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA 429 (431)
T ss_pred ECCCCCC-CCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence 9987653 4567999999999999999999999554 4443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-88 Score=709.77 Aligned_cols=432 Identities=24% Similarity=0.333 Sum_probs=395.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|+++|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++..+++++..
T Consensus 49 ~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~ 127 (496)
T PLN00412 49 ACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEE 127 (496)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999997 5999999999999887
Q ss_pred HHHhhcCc-cccC-cccc--CCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHH
Q 038617 82 LDKWMAPK-KRRL-PLLF--FPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET 157 (484)
Q Consensus 82 ~~~~~~~~-~~~~-~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~ 157 (484)
..++.... .... .... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~ 207 (496)
T PLN00412 128 GVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHC 207 (496)
T ss_pred HHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHH
Confidence 77665321 1111 0001 122346789999999999999999999999999999999999999999999999999999
Q ss_pred hccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 158 IPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 158 l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
+.++ +|+|++|+++| +.+.++.|+.|+ +|.|.|||| .+|+.|++.++ ++|+++|+|||||+||++ |||++.
T Consensus 208 l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~---dADl~~ 281 (496)
T PLN00412 208 FHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLE---DADLDL 281 (496)
T ss_pred HHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcC---CCCHHH
Confidence 9998 99999999998 467888899997 999999999 99999998875 799999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+|.+++++||++++.+++++.++++++.. |+
T Consensus 282 Aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga 360 (496)
T PLN00412 282 AAANIIKGGFS-YSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGA 360 (496)
T ss_pred HHHHHHHHHHh-cCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHHHHHCCC
Confidence 99999999999 99999999999999999999999999999999999999558899999999999999999998864 67
Q ss_pred ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus 361 ~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l 438 (496)
T PLN00412 361 TFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM 438 (496)
T ss_pred EEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 88887643 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++|+|+||++.. ...+.+||||+|.||+|+++|.+|+++||+.|++++..
T Consensus 439 ~~G~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 439 ETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINL 488 (496)
T ss_pred CcceEEEcCCCC-CCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEec
Confidence 999999998764 24467999999999999999999999999999997753
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-88 Score=714.14 Aligned_cols=433 Identities=23% Similarity=0.327 Sum_probs=402.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 65 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~ 143 (518)
T cd07125 65 LADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQ 143 (518)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999997 4999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+...... ..+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 144 ~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~ea 220 (518)
T cd07125 144 ARELFSDPELPG---PTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEA 220 (518)
T ss_pred HHHhcCCccccC---CCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHc
Confidence 888765432111 12445688999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 162 -LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 162 -lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+|+|++|+++|+. +.+..|++|+ +|.|+||||+.+|+.|++.++++ ++|+++|+|||||+||++ |||++.|
T Consensus 221 GlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~---dADl~~A 297 (518)
T cd07125 221 GVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDS---TALPEQA 297 (518)
T ss_pred CCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECC---CCCHHHH
Confidence 9999999999954 5888999987 99999999999999999988855 799999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCc
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA 314 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~ 314 (484)
++.+++++|. |+||.|++++|||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++..+++
T Consensus 298 a~~iv~g~f~-nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~ 376 (518)
T cd07125 298 VKDVVQSAFG-SAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAW 376 (518)
T ss_pred HHHHHHHHHh-cCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCE
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999877788
Q ss_pred eeeCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 315 IVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 315 ~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++||..+. .|+|+.|||+.++ +|++++||+||||++|++|+ |+||||+++|+++|||++||||+|.+.++++++
T Consensus 377 vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~ 454 (518)
T cd07125 377 LIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRE 454 (518)
T ss_pred EEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHH
Confidence 899987643 6899999999887 89999999999999999999 999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||+.+.+...+.+||||+|.||+|+ .+|.+++++||+.|++++..
T Consensus 455 ~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 455 RVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT 508 (518)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence 999999999998765555779999999999995 67899999999999998764
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-88 Score=708.07 Aligned_cols=432 Identities=21% Similarity=0.290 Sum_probs=399.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|++.|+++|.++|.++|++++++|++++++|+++++.|+|||..++. .|+..+++.+++++..
T Consensus 34 ~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~ 112 (477)
T TIGR01722 34 FASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGV 112 (477)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999997 5999999999998876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
...+.+.. .. ....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 113 ~~~~~g~~-~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~a 189 (477)
T TIGR01722 113 NSLLKGET-ST--QVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEA 189 (477)
T ss_pred HHHhcCcc-cc--cCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHh
Confidence 66543221 11 1112334577899999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.++.|++|+ ||.|+||||+.+|+.|.+.++.++||+++|+|||||+||++ |||++.|++.+
T Consensus 190 glP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~---dADl~~a~~~i 266 (477)
T TIGR01722 190 GAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMP---DADKDAAADAL 266 (477)
T ss_pred CcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECC---CCCHHHHHHHH
Confidence 99999999999877889999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|+|||+++ |+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus 267 ~~~~f~-~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~ 344 (477)
T TIGR01722 267 VGAAYG-AAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLL 344 (477)
T ss_pred HHHHHH-hcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 999999999999999999 9999999999999999999 889999999999999999999999864 779999
Q ss_pred CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
||... ++|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++
T Consensus 345 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~ 424 (477)
T TIGR01722 345 DGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHE 424 (477)
T ss_pred CCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHh
Confidence 98641 3589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEe
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++|.|+||++... ..+.+||||+|.||+| +++|.+++++||+.|++++.
T Consensus 425 l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 425 IEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred CCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 99999999986543 4568999999999999 57899999999999998765
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-88 Score=706.35 Aligned_cols=429 Identities=21% Similarity=0.303 Sum_probs=392.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++|+ +.++..+|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 35 ~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 110 (472)
T TIGR03250 35 KASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSLY-EVGRVADVLTFAAAE 110 (472)
T ss_pred CCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 578899999999999887 4689999999999999999999999999999999999999975 999999999999988
Q ss_pred HHHhhcCcccc-CccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 82 LDKWMAPKKRR-LPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
+.++.+..... ......+...++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~ 190 (472)
T TIGR03250 111 ALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILY 190 (472)
T ss_pred HHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH
Confidence 87654322110 00111123457899998 99999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++ ++|+++|+|||||+||++ |||++.|+
T Consensus 191 ~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--~~~~~lElGGk~p~iV~~---dAdl~~aa 265 (472)
T TIGR03250 191 EAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPLIVME---DADLDRAA 265 (472)
T ss_pred HcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc--CCceEEecCCCCeEEECC---CCCHHHHH
Confidence 98 99999999998 567899999997 999999999999999998775 689999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.++++++++++++.+ |++
T Consensus 266 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 344 (472)
T TIGR03250 266 DLAVKGSYK-NSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGAR 344 (472)
T ss_pred HHHHHHHHH-hhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999998 888999999999999999999999864 679
Q ss_pred eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+++||.. +|+|++|||+++++++|++++||+||||++|++|+|++||++++|+++|||++||||+|.+.+.+++++++
T Consensus 345 vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~ 422 (472)
T TIGR03250 345 LLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQ 422 (472)
T ss_pred EEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCC
Confidence 9999865 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 443 (484)
+|+|+||+.+.. ..+.+||||+|.||+| +.+|.+|+++||+.|+++++
T Consensus 423 ~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 423 VGTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred cceEEEcCCCCC-CCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence 999999987642 3456999999999999 56678999999999998765
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-88 Score=700.68 Aligned_cols=422 Identities=29% Similarity=0.457 Sum_probs=391.4
Q ss_pred HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 038617 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM 86 (484)
Q Consensus 7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~ 86 (484)
|+++++++|++||+.|++++.++|.++|++++++|+++.++|++++++|+|||..++.. |+..+++.+++++...+.+.
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~ 79 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQII 79 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 58899999999999999999999999999999999999999999999999999887764 99999999999998887652
Q ss_pred cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCcc
Q 038617 87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCK 165 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g 165 (484)
... .+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus 80 ~~~---~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~g 156 (432)
T cd07105 80 GGS---IPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKG 156 (432)
T ss_pred Cee---cccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCC
Confidence 221 111112345678999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCC----hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617 166 AIKVTNGG----VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 166 ~v~~v~g~----~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~ 240 (484)
++|+++|+ .++++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |+|++.|++.++
T Consensus 157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~---dadl~~aa~~i~ 233 (432)
T cd07105 157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLE---DADLDAAANAAL 233 (432)
T ss_pred cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECC---CCCHHHHHHHHH
Confidence 99999974 24688999998 99999999999999999999999999999999999999999 999999999999
Q ss_pred HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCceeeCC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGG 319 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg 319 (484)
+++|. |+||.|+++++||||+++||+|+++|++++.++++| ++++||++++.+++++.++++++.. ++++++||
T Consensus 234 ~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg 308 (432)
T cd07105 234 FGAFL-NSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGG 308 (432)
T ss_pred HHHHh-cCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 99999 999999999999999999999999999999999877 6789999999999999999998864 67899998
Q ss_pred CcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617 320 LLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397 (484)
Q Consensus 320 ~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 397 (484)
..+ ..|+|+.|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 309 ~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~ 388 (432)
T cd07105 309 LADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGA 388 (432)
T ss_pred CcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCe
Confidence 764 468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus 389 v~vN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 389 VHINGMTVH-DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred EEECCCCCC-CCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 999987754 4678999999999999999999999999999885
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-88 Score=695.85 Aligned_cols=424 Identities=53% Similarity=0.907 Sum_probs=393.6
Q ss_pred HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89 (484)
Q Consensus 10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 89 (484)
+++++|++||+.|+++|+.+|.++|++++++|++++++|+++++.|+|||..++...|+..+++.++++++.++.+.++.
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 48899999999999999999999999999999999999999999999999888766699999999999998887765443
Q ss_pred cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617 90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV 169 (484)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~ 169 (484)
.........+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v 161 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV 161 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence 22111111234568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617 170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG 249 (484)
Q Consensus 170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G 249 (484)
++|+.+.+..|++|++|.|+||||+.+|+.|.+.+++++||+++|+|||||+||++ |||++.|++.+++++|. |+|
T Consensus 162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~---dadl~~aa~~i~~~~~~-~~G 237 (426)
T cd07087 162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDK---DANLEVAARRIAWGKFL-NAG 237 (426)
T ss_pred EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecC---CCCHHHHHHHHHHHHHh-ccC
Confidence 99977788999998999999999999999999999999999999999999999999 99999999999999999 999
Q ss_pred CccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeee
Q 038617 250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIE 329 (484)
Q Consensus 250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~ 329 (484)
|.|+++++||||++++|+|+++|++.++++++++|++++++||++++.+.+++.++++++ ++++||..+.+|+|++
T Consensus 238 Q~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~ 313 (426)
T cd07087 238 QTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIA 313 (426)
T ss_pred CccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEe
Confidence 999999999999999999999999999999888888889999999999999999999865 7888987655689999
Q ss_pred eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCC
Q 038617 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC 409 (484)
Q Consensus 330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 409 (484)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.+...
T Consensus 314 Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 393 (426)
T cd07087 314 PTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAI 393 (426)
T ss_pred eEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987654456
Q ss_pred CCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 410 DVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 410 ~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 394 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 394 PNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 78999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-88 Score=704.04 Aligned_cols=430 Identities=29% Similarity=0.440 Sum_probs=398.5
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+++++++++|++|++ .|+++|.++|.++|++++++|.+++++|++++++|+|||..++.. |+..+++.+++++
T Consensus 15 ~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~~~~~a 93 (457)
T cd07114 15 EASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA-QVRYLAEWYRYYA 93 (457)
T ss_pred CCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHH
Confidence 4788999999999999997 499999999999999999999999999999999999999999875 9999999999988
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+...... .+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|+++|.
T Consensus 94 ~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~ 170 (457)
T cd07114 94 GLADKIEGAV---IPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAE 170 (457)
T ss_pred HHHHHhcCcc---cccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHH
Confidence 7665442211 1111123456789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.+++.++++++|+++|+|||||+||++ |||++.|+
T Consensus 171 ~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dAdl~~aa 247 (457)
T cd07114 171 EAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFD---DADLDAAV 247 (457)
T ss_pred HcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECC---CCCHHHHH
Confidence 99 99999999999 556889999997 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.|++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.+ |++
T Consensus 248 ~~i~~~~~~-~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 326 (457)
T cd07114 248 NGVVAGIFA-AAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGAR 326 (457)
T ss_pred HHHHHHHHh-ccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999998864 678
Q ss_pred eeeCCCcCC-----CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 315 IVHGGLLDK-----ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 315 ~~~gg~~~~-----~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++||.... .|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus 327 ~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~ 406 (457)
T cd07114 327 VLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRV 406 (457)
T ss_pred EEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHH
Confidence 999986532 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 407 ~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 407 ARAIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred HHhcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999998654 4678999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-89 Score=714.85 Aligned_cols=429 Identities=32% Similarity=0.509 Sum_probs=399.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|++.|+.++..+|.++|++++++|+++.++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 25 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 103 (462)
T PF00171_consen 25 SATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAEARG-EVDRAIDFLRYYADA 103 (462)
T ss_dssp EBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccccccc-hhhhhhhhhhhhhhc
Confidence 4688999999999999999999999999999999999999999999999999999999999987 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.. +.... ..+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 104 ~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~A 179 (462)
T PF00171_consen 104 ARKLAG-EVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEA 179 (462)
T ss_dssp HHHHTE-EEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHH
T ss_pred ccceeh-hhccc---ccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccchhhcccc
Confidence 988543 32211 24567889999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.+..|+.|+ +|.|.||||+++|+.|.+.++++++|+++|+|||||+||++ |||+|.|++.
T Consensus 180 glP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~---daDld~aa~~ 256 (462)
T PF00171_consen 180 GLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDP---DADLDKAAEA 256 (462)
T ss_dssp TSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-T---TSHHHHHHHH
T ss_pred ccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccccceeeEec---cccccccccc
Confidence 99999999999 778999999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||+++..+.+++.++++++.. |++++
T Consensus 257 iv~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 335 (462)
T PF00171_consen 257 IVRGAFF-NSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVL 335 (462)
T ss_dssp HHHHHHG-GGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEE
T ss_pred ccchhcc-cccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccccccccc
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999875 78999
Q ss_pred eCC----CcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 317 HGG----LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 317 ~gg----~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+|| .....|+|++|||+.+++++|+++++|+||||++|++|+|+|||++++|+++|||+++|||+|.+.+++++++
T Consensus 336 ~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~ 415 (462)
T PF00171_consen 336 CGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARR 415 (462)
T ss_dssp EETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEeccccccccccccc
Confidence 998 2346799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
+++|+|+||+++.+.... +||||+|.||+|+++|.+|+++|++.|+|
T Consensus 416 l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 416 LEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp STSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred ccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999999999998764444 89999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-87 Score=703.97 Aligned_cols=431 Identities=23% Similarity=0.319 Sum_probs=395.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++|+++|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 31 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 109 (484)
T TIGR03240 31 AASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKA 109 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999987 5999999999988877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
...+.+... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 110 ~~~~~g~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~a 185 (484)
T TIGR03240 110 YHERTGESE----NPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKA 185 (484)
T ss_pred HHHhcCccc----cCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence 766543221 1112334678899999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc-cCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH-LTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~-~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+.+.++.|++|+ +|.|+||||+++|+.|++.++.+ .+++++|+|||||+||++ |||++.|++.
T Consensus 186 GlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~---dADl~~aa~~ 262 (484)
T TIGR03240 186 GLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDE---VADIDAAVHL 262 (484)
T ss_pred CcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999778899999996 99999999999999999987765 588999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchH-HHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFA-ATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+++++|. |+||.|++++|||||++++ |+|+++|.+.++++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus 263 i~~~~~~-~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 341 (484)
T TIGR03240 263 IIQSAFI-SAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGK 341 (484)
T ss_pred HHHHHHh-cCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCE
Confidence 9999999 9999999999999999985 9999999999999999986 667899999999999999999999865 778
Q ss_pred eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+++||.. +.+++|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 342 ~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l 420 (484)
T TIGR03240 342 SLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEI 420 (484)
T ss_pred EEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 8888754 345789999999 68999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++|+|+||+...+ ..+.+||||+|.||+|+++|.++++ |++.|++.++.
T Consensus 421 ~aG~v~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 421 RAGIVNWNKPLTG-ASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred CcceEEEECCCCC-CCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 9999999987654 4577999999999999999977766 99999998874
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-87 Score=696.05 Aligned_cols=424 Identities=29% Similarity=0.421 Sum_probs=394.0
Q ss_pred HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 038617 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM 86 (484)
Q Consensus 7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~ 86 (484)
|++++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..++.. |+..+++.+++++....+..
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~ 79 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRRPE 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999999999999999999999999999999999999999999875 99999999999988776542
Q ss_pred cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHH-HHHHHHHhccc-cCc
Q 038617 87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVEC-ASFLAETIPLY-LDC 164 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t-~~~l~~~l~~a-lp~ 164 (484)
.. .. +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+ +..+.+++.++ +|+
T Consensus 80 ~~-~~--~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~ 156 (431)
T cd07104 80 GE-IL--PSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPK 156 (431)
T ss_pred Cc-cc--cCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCc
Confidence 21 11 111134466889999999999999999999999999999999999999999999998 67899999998 999
Q ss_pred cceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617 165 KAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242 (484)
Q Consensus 165 g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~ 242 (484)
|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.++++
T Consensus 157 gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dadl~~aa~~i~~~ 233 (431)
T cd07104 157 GVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLD---DADLDLAVSAAAFG 233 (431)
T ss_pred ccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECC---CCCHHHHHHHHHHH
Confidence 99999998 456889999997 99999999999999999999999999999999999999999 99999999999999
Q ss_pred hcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCC
Q 038617 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGL 320 (484)
Q Consensus 243 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~ 320 (484)
+|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. |+++++||.
T Consensus 234 ~~~-~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~ 312 (431)
T cd07104 234 AFL-HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGT 312 (431)
T ss_pred HHh-cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 999 99999999999999999999999999999999999999 788899999999999999999998864 778999986
Q ss_pred cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEE
Q 038617 321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400 (484)
Q Consensus 321 ~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 400 (484)
. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+|
T Consensus 313 ~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~i 390 (431)
T cd07104 313 Y--EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHI 390 (431)
T ss_pred C--CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEE
Confidence 4 58999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 401 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+++.+ ..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus 391 N~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 391 NDQTVN-DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 998765 4578999999999999999999999999999875
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-87 Score=699.36 Aligned_cols=430 Identities=28% Similarity=0.418 Sum_probs=401.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+++++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++++.
T Consensus 15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~ 94 (455)
T cd07093 15 EGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADY 94 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 57889999999999999999999999999999999999999999999999999999999988767999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
..+... .... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++|.++
T Consensus 95 ~~~~~~-~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~a 170 (455)
T cd07093 95 ILQLDG-ESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEA 170 (455)
T ss_pred HHHhCC-cccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhc
Confidence 765321 1111 112446678899999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ +|+|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 171 glP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dAdl~~a~~~ 247 (455)
T cd07093 171 GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFA---DADLDRAVDA 247 (455)
T ss_pred CCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECC---CCCHHHHHHH
Confidence 99999999998 567889999987 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++. +|++++
T Consensus 248 i~~~~~~-~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~ 326 (455)
T cd07093 248 AVRSSFS-NNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATIL 326 (455)
T ss_pred HHHHHHh-ccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 88899999999999999999999886 477999
Q ss_pred eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||... ..|+|+.|||++++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 327 ~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~ 406 (455)
T cd07093 327 TGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVAR 406 (455)
T ss_pred eCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 998653 248899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
++++|+|+||+...+ .+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 407 ~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 407 RLEAGTVWVNCWLVR--DLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred hCCcceEEECCCCCC--CCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999998764 467899999999999999999999999999875
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-87 Score=698.11 Aligned_cols=430 Identities=29% Similarity=0.426 Sum_probs=401.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..+++. |+..+++.++++...
T Consensus 15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 93 (451)
T cd07103 15 DAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG-EVDYAASFLEWFAEE 93 (451)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999975 999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.++..+.. .+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++
T Consensus 94 ~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~a 170 (451)
T cd07103 94 ARRIYGRT---IPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEA 170 (451)
T ss_pred HHHhcCcc---cccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHc
Confidence 76654322 111113446788999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 171 glP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dadl~~aa~~ 247 (451)
T cd07103 171 GLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFD---DADLDKAVDG 247 (451)
T ss_pred CCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999 457788899886 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~ 316 (484)
+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++. ++++++
T Consensus 248 i~~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l 326 (451)
T cd07103 248 AIASKFR-NAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVL 326 (451)
T ss_pred HHHHHHH-hcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999998 88899999999999999999999986 477899
Q ss_pred eCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||.... +|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++
T Consensus 327 ~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~ 406 (451)
T cd07103 327 TGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEA 406 (451)
T ss_pred eCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 9987543 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|.|+||++.. ..+.+||||+|.||+|+++|++++++||+.|++.
T Consensus 407 g~v~vN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 407 GMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred ceEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999875 3577999999999999999999999999999874
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-87 Score=700.65 Aligned_cols=429 Identities=21% Similarity=0.273 Sum_probs=383.8
Q ss_pred HHHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHH
Q 038617 5 MGEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLD 83 (484)
Q Consensus 5 ~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~ 83 (484)
.+|+++|+++|++| |+.|+.++.++|.++|++++++|++++++|+++ +.|+|||+.+++. |+..+++.++++++..+
T Consensus 35 ~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~ 112 (513)
T cd07128 35 GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGR 112 (513)
T ss_pred HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 37999999999998 799999999999999999999999999999995 9999999999984 99999999999999888
Q ss_pred HhhcCcccc-----CccccCC-CcceEEeec-ceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 84 KWMAPKKRR-----LPLLFFP-ASGEVVSEP-FGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 84 ~~~~~~~~~-----~~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
++..+.... .+....+ ...+++++| +|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 192 (513)
T cd07128 113 RELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVK 192 (513)
T ss_pred hhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHH
Confidence 765321110 0111111 134678999 599999999999999999999999999999999999999999999999
Q ss_pred Hhccc--cCccceeeccCCh-hHHHHHHhCCCCeEEEeCChHHHHHHHHHH--hcccCceeeecCCcCceEEcCCCCCCC
Q 038617 157 TIPLY--LDCKAIKVTNGGV-DVCEQLLQQKWNKIFFTGSPRVGSIVMSAA--AKHLTPVTLELGGKCPAILDTLSSPLD 231 (484)
Q Consensus 157 ~l~~a--lp~g~v~~v~g~~-~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~~~~daD 231 (484)
++.++ +|+|++|+++|+. +.++.| ..+|+|.||||+++|+.|++.+ +++++|+++|+|||||+||++ |||
T Consensus 193 ~~~eaG~lP~gv~~~v~g~~~~~~~~l--~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~---DAd 267 (513)
T cd07128 193 DIVESGLLPEGALQLICGSVGDLLDHL--GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGP---DAT 267 (513)
T ss_pred HHHHhCCCCCCcEEEecCChHHHhccc--CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECC---CCC
Confidence 99997 7999999999853 333332 1389999999999999999975 478999999999999999999 999
Q ss_pred -----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHH
Q 038617 232 -----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 232 -----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~ 305 (484)
++.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++
T Consensus 268 ~~~~dld~aa~~iv~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~ 346 (513)
T cd07128 268 PGTPEFDLFVKEVAREMTV-KAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAA 346 (513)
T ss_pred cchhhHHHHHHHHHHHHHH-hcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999 889999999999999999999
Q ss_pred hhchhcCCceeeCCCcC--------CCCCeeeeEEEeCCCCC--CcccccceecceeeeeeeCCHHHHHHHHhcCCCCce
Q 038617 306 LKDPLVADAIVHGGLLD--------KENLFIEPTILLDPPLD--AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA 375 (484)
Q Consensus 306 i~~a~~~~~~~~gg~~~--------~~g~~~~Ptil~~~~~~--~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 375 (484)
|+++.+++++++||... .+|+|++|||+.+++++ |.+++||+||||++|++|+|+||||+++|+++|||+
T Consensus 347 i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~ 426 (513)
T cd07128 347 VATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLV 426 (513)
T ss_pred HHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCee
Confidence 99987668899998642 35899999999988874 899999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHhhccc--eeeEEECCCcc-------ccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEE
Q 038617 376 IYAFTKDETFKKQIVSGTS--SGSLIFNDTLV-------QQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIM 441 (484)
Q Consensus 376 a~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~-------~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~ 441 (484)
+||||+|.+.+++++++++ +|+|+||+... +...+.+||||+|.||+|+++ |.+++++|++.|+|.
T Consensus 427 asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 427 ASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred EEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 9999999999999999997 99999998642 123467899999999999995 799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-87 Score=683.05 Aligned_cols=400 Identities=24% Similarity=0.366 Sum_probs=370.3
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEE
Q 038617 34 LRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVL 113 (484)
Q Consensus 34 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 113 (484)
|++++++|++++++|++++++|+|||..++. .|+..+++.+++++...+.+..... .....+...+++++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII---QSDRPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc---CCCCCCceeEEEEecccEEE
Confidence 5789999999999999999999999999998 4999999999999887766533211 11112335678999999999
Q ss_pred EEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEE
Q 038617 114 ICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFF 190 (484)
Q Consensus 114 ~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~f 190 (484)
+|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|++|+ +|+|+|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999998 99999999999 567889999987 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHH
Q 038617 191 TGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIE 270 (484)
Q Consensus 191 tGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 270 (484)
|||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+++++|. |+||.|++++|+|||++++|+|++
T Consensus 157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~---dADld~aa~~iv~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~ 232 (409)
T PRK10090 157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMD---DADLDLAVKAIVDSRVI-NSGQVCNCAERVYVQKGIYDQFVN 232 (409)
T ss_pred ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcC---CCCHHHHHHHHHHHHHH-hcCCCCCCCeEEEEcHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999 999999999999999999999999
Q ss_pred HHHHHHHhhcCCCC-CC-CCccccccCHHHHHHHHHHhhchhc-CCceeeCCCcCC-CCCeeeeEEEeCCCCCCcccccc
Q 038617 271 SLKTTIKKFYGENP-KD-SKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEE 346 (484)
Q Consensus 271 ~l~~~~~~~~~g~~-~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE 346 (484)
+|.++++++++||| ++ ++++||++++.+++++.++++++.+ |+++++||..+. .|+|++|||+.+++++|++++||
T Consensus 233 ~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE 312 (409)
T PRK10090 233 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 312 (409)
T ss_pred HHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCC
Confidence 99999999999999 66 8899999999999999999999864 778999997643 58899999999999999999999
Q ss_pred eecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcc
Q 038617 347 IFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH 426 (484)
Q Consensus 347 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~ 426 (484)
+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||+...+ .+..||||+|.||+|+++
T Consensus 313 ~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~ 390 (409)
T PRK10090 313 TFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGAD 390 (409)
T ss_pred CCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccccCCccc
Confidence 999999999999999999999999999999999999999999999999999999997764 345799999999999999
Q ss_pred hHHHHHHhhhccEEEEe
Q 038617 427 GHYSFETFSHEKAIMQR 443 (484)
Q Consensus 427 g~~~~~~f~~~k~v~~~ 443 (484)
|.+|+++|++.|++++.
T Consensus 391 g~~gl~~f~~~k~v~~~ 407 (409)
T PRK10090 391 GKHGLHEYLQTQVVYLQ 407 (409)
T ss_pred hHHHHHHhcceEEEEEe
Confidence 99999999999998764
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=691.35 Aligned_cols=426 Identities=24% Similarity=0.342 Sum_probs=391.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+++++++++|+++ |++++.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 17 ~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~ 92 (451)
T cd07146 17 AGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY-EVGRAADVLRFAAAE 92 (451)
T ss_pred CCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 47889999999999875 88899999999999999999999999999999999999999974 999999999999988
Q ss_pred HHHhhcCccccCcc--ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 82 LDKWMAPKKRRLPL--LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 82 ~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+.+... .... ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 93 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~ 171 (451)
T cd07146 93 ALRDDGESF-SCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLY 171 (451)
T ss_pred HHHhcCccc-ccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHH
Confidence 766533221 1110 0123345789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++ .+|+++|+|||||+||++ |||++.|+
T Consensus 172 ~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV~~---daDl~~aa 246 (451)
T cd07146 172 EAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIVMD---DADLERAA 246 (451)
T ss_pred HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEECC---CCCHHHHH
Confidence 98 99999999998 467799999997 999999999999999998775 689999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.++++++++++++.. |++
T Consensus 247 ~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~ 325 (451)
T cd07146 247 TLAVAGSYA-NSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGAR 325 (451)
T ss_pred HHHHHHHHh-hCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence 999999999 99999999999999999999999999999999999999 888999999999999999999999864 778
Q ss_pred eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++++++
T Consensus 326 vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~ 403 (451)
T cd07146 326 VLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLD 403 (451)
T ss_pred EEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCC
Confidence 9999864 48899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCC-CCcchHHHHHHhhhccEEE
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGI-GRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~-G~~~g~~~~~~f~~~k~v~ 441 (484)
+|+|+||+.+. ...+.+||||+|.||+ |+++|.+|+++||+.|+++
T Consensus 404 ~G~v~iN~~~~-~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 404 VGTVNVNEVPG-FRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred cceEEECCCCC-CCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999998753 3456899999999995 8999999999999999874
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-86 Score=690.76 Aligned_cols=430 Identities=27% Similarity=0.420 Sum_probs=395.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+++++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..++.. |+..+++.++++++.
T Consensus 17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 95 (453)
T cd07149 17 VASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK-EVDRAIETLRLSAEE 95 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999974 999999999999887
Q ss_pred HHHhhcCccccCccc-cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLL-FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
...+.+......... ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ 175 (453)
T cd07149 96 AKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLE 175 (453)
T ss_pred HHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH
Confidence 766543221100000 1122457789999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++|+ .+.+..|++|+ +|+|+||||+++|+.|++.++ ++|+++|+|||||+||++ |+|++.|++
T Consensus 176 ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~iV~~---dadl~~aa~ 250 (453)
T cd07149 176 AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVDA---DADLEKAVE 250 (453)
T ss_pred cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEEECC---CCCHHHHHH
Confidence 8 999999999984 45689999997 999999999999999998874 789999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++++|||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++.. ++++
T Consensus 251 ~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v 329 (453)
T cd07149 251 RCVSGAFA-NAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARL 329 (453)
T ss_pred HHHHHHHH-hcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 888999999999999999999999864 6788
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 330 ~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~ 407 (453)
T cd07149 330 LTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEV 407 (453)
T ss_pred EeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCc
Confidence 899865 488999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
|+|+||+.+.. ..+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus 408 g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 408 GGVMINDSSTF-RVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CeEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999987643 3568999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-86 Score=691.92 Aligned_cols=416 Identities=22% Similarity=0.330 Sum_probs=384.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 70 ~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~ 148 (500)
T TIGR01238 70 HANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQ 148 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999974 999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.. ...++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 149 ~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a 213 (500)
T TIGR01238 149 VRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA 213 (500)
T ss_pred HHHhcC---------------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHc
Confidence 755421 13589999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc---CceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL---TPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~---~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.+++++ +|+++|+|||||+||++ |||++.|
T Consensus 214 GlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~---dAdld~A 290 (500)
T TIGR01238 214 GFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDS---TALPEQV 290 (500)
T ss_pred CCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECC---CCCHHHH
Confidence 99999999998 457889999987 999999999999999999998876 79999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ ++
T Consensus 291 a~~i~~~~f~-nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 369 (500)
T TIGR01238 291 VRDVLRSAFD-SAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQK 369 (500)
T ss_pred HHHHHHHHHh-cCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999998875 45
Q ss_pred ceeeCCC---c-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617 314 AIVHGGL---L-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKK 387 (484)
Q Consensus 314 ~~~~gg~---~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 387 (484)
+++.++. . ..+|+|++|||+.+ ++|.+++||+||||++|++|+ ++||||+++|+++|||++||||+|.+.+.
T Consensus 370 ~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~ 447 (500)
T TIGR01238 370 KIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYR 447 (500)
T ss_pred EEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHH
Confidence 5543321 1 23689999999974 688899999999999999998 79999999999999999999999999999
Q ss_pred HHhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccE
Q 038617 388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKA 439 (484)
Q Consensus 388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~ 439 (484)
++++++++|+|+||+...+...+.+||||+|.||+| +.+|.+++++|++.|+
T Consensus 448 ~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 448 WIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500 (500)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhcC
Confidence 999999999999998765544466899999999999 7999999999998773
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-86 Score=709.61 Aligned_cols=430 Identities=20% Similarity=0.238 Sum_probs=383.5
Q ss_pred CCHHHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
++ +|+++|+++|++| |+.|+++|.++|.++|++++++|++++++|++ +++|+|||+.+++. |+..+++.++++++.
T Consensus 34 ~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~ 110 (663)
T TIGR02278 34 EG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSL 110 (663)
T ss_pred Cc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence 45 5899999999996 99999999999999999999999999999999 59999999999975 999999999999988
Q ss_pred HHHhhcCcc----ccC-ccccC-CCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617 82 LDKWMAPKK----RRL-PLLFF-PASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFL 154 (484)
Q Consensus 82 ~~~~~~~~~----~~~-~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l 154 (484)
.+++..... ... +.... ....++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|.++..+
T Consensus 111 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l 190 (663)
T TIGR02278 111 GRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEAL 190 (663)
T ss_pred hhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH
Confidence 876431110 000 11111 12457899997 999999999999999999999999999999999999999999999
Q ss_pred HHHhccc--cCccceeeccCChhHHHHHHhC-C-CCeEEEeCChHHHHHHHHHH--hcccCceeeecCCcCceEEcCCCC
Q 038617 155 AETIPLY--LDCKAIKVTNGGVDVCEQLLQQ-K-WNKIFFTGSPRVGSIVMSAA--AKHLTPVTLELGGKCPAILDTLSS 228 (484)
Q Consensus 155 ~~~l~~a--lp~g~v~~v~g~~~~~~~L~~~-~-vd~v~ftGs~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~~~~ 228 (484)
.+++.++ +|+|++|+++|+. +. +..+ + +|+|+||||+++|+.|++.+ +++++|+++|||||||+||++
T Consensus 191 ~~~~~~aG~lP~gv~~~v~g~~--~~-~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~--- 264 (663)
T TIGR02278 191 VRTMVESGLLPEGSLQLICGSA--GD-LLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE--- 264 (663)
T ss_pred HHHHHHhCCCCCCcEEEEeCCh--HH-HHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcC---
Confidence 9999997 7999999999852 22 3333 4 89999999999999999864 478999999999999999999
Q ss_pred CCC-----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHH
Q 038617 229 PLD-----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERL 302 (484)
Q Consensus 229 daD-----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~ 302 (484)
||| ++.|++.+++++|. |+||.|++++|||||++++|+|+++|.++++++++|+| ++++++||++++.+++++
T Consensus 265 dAd~~~~dl~~aa~~i~~~~f~-~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i 343 (663)
T TIGR02278 265 DATPDEPEFDLFAQEIVRELTI-KAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADV 343 (663)
T ss_pred CCCccchhHHHHHHHHHHHHHh-cCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHH
Confidence 999 99999999999999 99999999999999999999999999999999999999 888999999999999999
Q ss_pred HHHhhchhc-CCceeeCCCcCCCCCeeeeEEEeCCCCCC-cccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEec
Q 038617 303 RKLLKDPLV-ADAIVHGGLLDKENLFIEPTILLDPPLDA-EIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFT 380 (484)
Q Consensus 303 ~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~-~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 380 (484)
+++|+++.+ |+++++||..+.+|+|++|||+.+++++| .+++||+||||++|++|+|++|||+++|+++|||++||||
T Consensus 344 ~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft 423 (663)
T TIGR02278 344 EAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLAT 423 (663)
T ss_pred HHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEe
Confidence 999999875 78999999765568999999999998876 7999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcc--ceeeEEE-CCCc-----cc-cCCCCCCcccCCCCCCCCc-chHHHHHHhhhccEEEE
Q 038617 381 KDETFKKQIVSGT--SSGSLIF-NDTL-----VQ-QLCDVLPFGGVGQSGIGRY-HGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 381 ~d~~~~~~~~~~l--~~g~v~i-N~~~-----~~-~~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~~k~v~~ 442 (484)
+|.+.++++++++ ++|+|+| |.+. .+ ...+.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 424 ~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 424 SDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEc
Confidence 9999999999999 8999999 6421 11 1246789999999999999 46899999999999855
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-86 Score=690.31 Aligned_cols=431 Identities=27% Similarity=0.395 Sum_probs=398.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCC-CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITK-SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++++++|++|++.|++. +.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++
T Consensus 34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~ 112 (473)
T cd07082 34 ALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIE 112 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHH
Confidence 478899999999999999999988 9999999999999999999999999999999999999875 99999999999998
Q ss_pred HHHHhhcCccccCccc--cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 81 CLDKWMAPKKRRLPLL--FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
..+++.+.... .... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++
T Consensus 113 ~~~~~~g~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l 191 (473)
T cd07082 113 ELKRLDGDSLP-GDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAF 191 (473)
T ss_pred HHHHhcCCccc-ccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH
Confidence 88776443211 1110 12345678999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
.++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+++|+.|.+.++ ++|+++|+|||||+||++ |||++.|
T Consensus 192 ~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelgg~n~~iV~~---dadl~~a 266 (473)
T cd07082 192 HDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--MKRLVLELGGKDPAIVLP---DADLELA 266 (473)
T ss_pred HHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC--CCcEEEEcCCCCeEEECC---CCCHHHH
Confidence 997 99999999999 556789999887 999999999999999999876 799999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|+++++||||++++|+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.. ++
T Consensus 267 a~~i~~~~~~-~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga 345 (473)
T cd07082 267 AKEIVKGALS-YSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGA 345 (473)
T ss_pred HHHHHHHHHH-hCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999998 788999999999999999999998864 67
Q ss_pred ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
++++||... .|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++
T Consensus 346 ~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l 424 (473)
T cd07082 346 TVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADAL 424 (473)
T ss_pred EEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhC
Confidence 899998764 3899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 425 ~~G~v~iN~~~~~-~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 425 EVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred CcceEEECCCCCC-CCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 9999999997754 34578999999999999999999999999999865
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-86 Score=692.78 Aligned_cols=431 Identities=19% Similarity=0.232 Sum_probs=381.8
Q ss_pred CHHHHHHHHHHHHHHh-HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 4 AMGEIEDKLAELRQTF-RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 4 ~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
+.+|+++|+++|++|+ +.|+++|+.+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++.+++++...
T Consensus 38 ~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a 116 (521)
T PRK11903 38 TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLG 116 (521)
T ss_pred ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHH
Confidence 6689999999999995 9999999999999999999999999999999999999999999975 9999999999999887
Q ss_pred HHhhcCccccCc--c--cc-CCCcceEEeec-ceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 83 DKWMAPKKRRLP--L--LF-FPASGEVVSEP-FGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 83 ~~~~~~~~~~~~--~--~~-~~~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
+.+.+....... . .. ......+.++| +|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~ 196 (521)
T PRK11903 117 AALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVK 196 (521)
T ss_pred HHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHH
Confidence 655322111000 0 00 11234677899 699999999999999999999999999999999999999999999999
Q ss_pred Hhccc--cCccceeeccCC-hhHHHHHHhCCCCeEEEeCChHHHHHHHHHH--hcccCceeeecCCcCceEEcCCCCCCC
Q 038617 157 TIPLY--LDCKAIKVTNGG-VDVCEQLLQQKWNKIFFTGSPRVGSIVMSAA--AKHLTPVTLELGGKCPAILDTLSSPLD 231 (484)
Q Consensus 157 ~l~~a--lp~g~v~~v~g~-~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~~~~daD 231 (484)
++.++ +|+|++|+++|+ .+.++.| ..+|.|.||||+.+|+.|++.+ +.+++|+++|+|||||+||++ |||
T Consensus 197 ~~~~ag~lP~gv~~~v~g~~~~~~~~l--~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~---dAd 271 (521)
T PRK11903 197 DVVAAGILPAGALSVVCGSSAGLLDHL--QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGP---DAA 271 (521)
T ss_pred HHHHhCCCCcCceEEeeCCchHHHhcc--cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEcc---CCc
Confidence 99886 799999999984 4444444 3499999999999999999864 478999999999999999999 999
Q ss_pred -----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHH
Q 038617 232 -----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 232 -----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~ 305 (484)
++.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++
T Consensus 272 ~~~~~~~~aa~~i~~~~f~-~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~ 350 (521)
T PRK11903 272 PGSEAFDLFVKEVVREMTV-KSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAG 350 (521)
T ss_pred ccchhHHHHHHHHHHHHHh-ccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHH
Confidence 59999999999999 99999999999999999999999999999999999999 888999999999999999999
Q ss_pred hhchhcCCceeeCCCcC-------CCCCeeeeEEEeCCCC--CCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceE
Q 038617 306 LKDPLVADAIVHGGLLD-------KENLFIEPTILLDPPL--DAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI 376 (484)
Q Consensus 306 i~~a~~~~~~~~gg~~~-------~~g~~~~Ptil~~~~~--~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 376 (484)
|+...+++++++||... .+|+|++|||+.++++ ++.+++||+||||++|++|+|+||||+++|+++|||++
T Consensus 351 i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~a 430 (521)
T PRK11903 351 LAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVA 430 (521)
T ss_pred HHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceE
Confidence 98766688999998641 2488999999986654 46889999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHhhcc--ceeeEEECCCcc-------ccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEE
Q 038617 377 YAFTKDETFKKQIVSGT--SSGSLIFNDTLV-------QQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIM 441 (484)
Q Consensus 377 ~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~-------~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~ 441 (484)
||||+|.+.+.++++++ ++|+|+||+.+. ....+.+||||+|.||+|+++ |.+++++||+.|++.
T Consensus 431 svft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 431 SVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred EEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceee
Confidence 99999999999999999 899999997542 113457899999999999995 589999999977654
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-85 Score=726.49 Aligned_cols=433 Identities=23% Similarity=0.332 Sum_probs=401.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+++++|+++|++|++.|+.+|.++|.++|++++++|++++++|+.++++|+||+..++. .|+..+++.++|++..
T Consensus 581 ~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~ 659 (1038)
T PRK11904 581 FADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQ 659 (1038)
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999996 5999999999999999
Q ss_pred HHHhhcC-ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAP-KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
.+++... .... ...+..+..+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 660 a~~~~~~~~~l~---g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e 736 (1038)
T PRK11904 660 ARRLFGAPEKLP---GPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE 736 (1038)
T ss_pred HHHhhCCCcccC---CCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH
Confidence 8877532 1111 12355778899999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
+ +|+|++|+++| +.+.+..|++|+ ||.|+||||+.+|+.|.+.++.+ .+|+++|+|||||+||++ |||+|.
T Consensus 737 AGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~---dAdld~ 813 (1038)
T PRK11904 737 AGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDS---TALPEQ 813 (1038)
T ss_pred hCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECC---CCCHHH
Confidence 8 99999999999 456899999997 99999999999999999988765 689999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCC
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVAD 313 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~ 313 (484)
|++.+++|+|. |+||.|++++++|||++++|+|+++|+++++++++|+| +.++++||+|++.+++++.++|+++.+++
T Consensus 814 Av~~iv~saF~-~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga 892 (1038)
T PRK11904 814 VVDDVVTSAFR-SAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREA 892 (1038)
T ss_pred HHHHHHHHHHh-CCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCC
Confidence 99999999999 99999999999999999999999999999999999999 88999999999999999999999988788
Q ss_pred ceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 314 AIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 314 ~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
++++||..++ +|+|+.|||+.. +++.+++||+||||++|++|+ +++|||+++|+++|||+++|||+|.+.+++
T Consensus 893 ~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~ 970 (1038)
T PRK11904 893 RLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADR 970 (1038)
T ss_pred EEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHH
Confidence 9999987643 499999999963 577789999999999999998 699999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++++|+||||+.+++...+.+||||+|.||+| +.+|++++.+|++.|+|.++.
T Consensus 971 ~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 971 IADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred HHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 99999999999999877666677899999999999 578899999999999998764
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-85 Score=704.39 Aligned_cols=429 Identities=21% Similarity=0.289 Sum_probs=381.5
Q ss_pred HHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHH
Q 038617 6 GEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDK 84 (484)
Q Consensus 6 ~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~ 84 (484)
+|+++|+++|++| ++.|+++++.+|.++|++++++|++++++|++ ++.|+|||..+++. |+..+++.+++++...++
T Consensus 40 ~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~ 117 (675)
T PRK11563 40 LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRR 117 (675)
T ss_pred HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence 6999999999998 79999999999999999999999999999998 59999999999985 999999999999988765
Q ss_pred hhcCcc----ccC-ccccCC-CcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHH
Q 038617 85 WMAPKK----RRL-PLLFFP-ASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET 157 (484)
Q Consensus 85 ~~~~~~----~~~-~~~~~~-~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~ 157 (484)
...... ... +....+ ...++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|+++..|+++
T Consensus 118 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~ 197 (675)
T PRK11563 118 ELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRL 197 (675)
T ss_pred hccccccccCCccccccCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHH
Confidence 432110 000 111111 1246788997 999999999999999999999999999999999999999999999999
Q ss_pred hccc--cCccceeeccCChhHHHHHHhC-C-CCeEEEeCChHHHHHHHHH--HhcccCceeeecCCcCceEEcCCCCCCC
Q 038617 158 IPLY--LDCKAIKVTNGGVDVCEQLLQQ-K-WNKIFFTGSPRVGSIVMSA--AAKHLTPVTLELGGKCPAILDTLSSPLD 231 (484)
Q Consensus 158 l~~a--lp~g~v~~v~g~~~~~~~L~~~-~-vd~v~ftGs~~~g~~i~~~--a~~~~~~~~lelgG~~p~iV~~~~~daD 231 (484)
+.++ +|+|++|+++|+.. + +..+ + +|.|.||||+++|+.|++. ++++++|+++|||||||+||++ |||
T Consensus 198 ~~eaG~~P~gv~~vv~g~~~--~-~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~---DAd 271 (675)
T PRK11563 198 IVESGLLPEGALQLICGSAG--D-LLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGP---DAT 271 (675)
T ss_pred HHHcCCCCCCcEEEeeCCHH--H-HhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECC---CCC
Confidence 9986 89999999998522 2 3333 3 8999999999999999985 4588999999999999999999 995
Q ss_pred -----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHH
Q 038617 232 -----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 232 -----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~ 305 (484)
+|.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++
T Consensus 272 ~~~~dld~aa~~i~~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~ 350 (675)
T PRK11563 272 PGTPEFDLFVKEVVREMTV-KAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREK 350 (675)
T ss_pred cCchhHHHHHHHHHHHHHH-hCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999 889999999999999999999
Q ss_pred hhchhcCCceeeCCCcC--------CCCCeeeeEEEeCCCC--CCcccccceecceeeeeeeCCHHHHHHHHhcCCCCce
Q 038617 306 LKDPLVADAIVHGGLLD--------KENLFIEPTILLDPPL--DAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA 375 (484)
Q Consensus 306 i~~a~~~~~~~~gg~~~--------~~g~~~~Ptil~~~~~--~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 375 (484)
|+++.+.+++++||... .+|+|++|||+.++++ ++.+++||+||||++|++|+|+||||+++|+++|||+
T Consensus 351 i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~ 430 (675)
T PRK11563 351 VAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLV 430 (675)
T ss_pred HHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCce
Confidence 99997668999998521 3589999999999998 5799999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHhhccc--eeeEEECCCcc------cc-CCCCCCcccCCCCCCCCc-chHHHHHHhhhccEEEEe
Q 038617 376 IYAFTKDETFKKQIVSGTS--SGSLIFNDTLV------QQ-LCDVLPFGGVGQSGIGRY-HGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 376 a~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~------~~-~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~~k~v~~~ 443 (484)
+||||+|.+.+.+++++++ +|.|+||+.+. +. ..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 431 asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 431 ASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecC
Confidence 9999999999999999997 99999997531 11 236789999999999999 469999999999998653
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-82 Score=709.89 Aligned_cols=416 Identities=22% Similarity=0.340 Sum_probs=386.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++|++.|+.+|.++|.++|++++++|++++++|+.++++|+||+..++. .|+..+++.++|++..
T Consensus 678 ~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~-~EV~eaidflryyA~~ 756 (1318)
T PRK11809 678 EATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQ 756 (1318)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999996 4999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+..+ ....++|+|||++|+|||||+.++++++++||++||+||+|||+++|+++..+++++.++
T Consensus 757 a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eA 821 (1318)
T PRK11809 757 VRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA 821 (1318)
T ss_pred HHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHh
Confidence 65421 124689999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc------CceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL------TPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~------~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+++..|+.|+ ||.|+||||+++|+.|.+.+++++ +|+++|+|||||+||++ |||+
T Consensus 822 GlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVds---dAdl 898 (1318)
T PRK11809 822 GVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDS---SALT 898 (1318)
T ss_pred CcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECC---CCCH
Confidence 99999999999 556899999997 999999999999999999988775 79999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
|.|++.+++|+|. ++||+|++.+++|||++++|+|+++|+++++++++|+| +.++++||+|++.+.+++.++|+++.+
T Consensus 899 e~Av~~iv~sAF~-~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~ 977 (1318)
T PRK11809 899 EQVVADVLASAFD-SAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRA 977 (1318)
T ss_pred HHHHHHHHHHHHh-cCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999 789999999999999999999999875
Q ss_pred -CCceeeCCCcC----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHH
Q 038617 312 -ADAIVHGGLLD----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDET 384 (484)
Q Consensus 312 -~~~~~~gg~~~----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~ 384 (484)
|+.++.||... ..|+|+.|||+.. +++.++++|+||||++|++|+ ++||+|+++|+++|||+++|||+|.+
T Consensus 978 ~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~ 1055 (1318)
T PRK11809 978 KGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDE 1055 (1318)
T ss_pred cCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHH
Confidence 55677766432 3599999999974 567889999999999999996 79999999999999999999999999
Q ss_pred HHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccE
Q 038617 385 FKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKA 439 (484)
Q Consensus 385 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~ 439 (484)
.++++++++++|+||||+...+...+.+||||+|.||+|. .+|++++..|+..+.
T Consensus 1056 ~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1056 TIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred HHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 9999999999999999998776555678999999999994 689999999998874
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-82 Score=655.31 Aligned_cols=411 Identities=19% Similarity=0.248 Sum_probs=364.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhc--CCCCHHHH----HHHHHHHHHHHHhc--HHHHHHHHHHHcCCChhhhhHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSG--ITKSVAWR----KNQLRALIELLQDN--EDKIFKALHQDLGKHPVETYRDEIGLIKK 73 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~ea~~~ev~~~~~ 73 (484)
.++.+|+++|+++|++||+.| +.++..+| .++|.++++.|+++ .++|++++++|+|||+.+++ .|+..+++
T Consensus 30 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~ 108 (489)
T cd07126 30 DTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRK 108 (489)
T ss_pred CCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 578999999999999999998 55779999 89999999999998 59999999999999999997 49999999
Q ss_pred HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
.+++++....++.+... ..+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 109 ~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~ 187 (489)
T cd07126 109 FLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQ 187 (489)
T ss_pred HHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHH
Confidence 99999987766543221 00111123466889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC-
Q 038617 154 LAETIPLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL- 230 (484)
Q Consensus 154 l~~~l~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da- 230 (484)
|++++.++ +|+|++|+++|+.+.+..|+.|+ +|+|+||||+++|+.|...++ +++++|+|||||+||++ ||
T Consensus 188 l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g---~k~~lElgg~~~~IV~~---Da~ 261 (489)
T cd07126 188 FLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELH---GKVKLEDAGFDWKILGP---DVS 261 (489)
T ss_pred HHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC---CCEEeecCCCCceEECC---Ccc
Confidence 99999998 99999999999544466688776 999999999999999988766 67999999999999999 99
Q ss_pred CHHHHHHHHHHhhcccCCCCccccCCceEEccch-HHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhch
Q 038617 231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKF-AATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP 309 (484)
Q Consensus 231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a 309 (484)
|+|.|++.+++++|. |+||.|++++|+|||+++ +|+|+++|++.++++++++ +++||+++.. .+++.++++++
T Consensus 262 dld~a~~~~~~g~f~-naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~----~~~Gpli~~~-~~~v~~~i~~a 335 (489)
T cd07126 262 DVDYVAWQCDQDAYA-CSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED----LTIGPVLTWT-TERILDHVDKL 335 (489)
T ss_pred cHHHHHHHHHHHHHh-cCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC----CcCCCCcCHH-HHHHHHHHHHH
Confidence 999999999999999 999999999999999995 6899999999999988763 5899999998 89999999998
Q ss_pred h--cCCceeeCCCcCC-----CC-CeeeeEEEeC------CCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCCCC
Q 038617 310 L--VADAIVHGGLLDK-----EN-LFIEPTILLD------PPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRPKP 373 (484)
Q Consensus 310 ~--~~~~~~~gg~~~~-----~g-~~~~Ptil~~------~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~g 373 (484)
. +|+++++||..+. .+ .|++|||+.. ++++|++++||+||||++|++|+| +||||+++|+++||
T Consensus 336 ~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~g 415 (489)
T cd07126 336 LAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAH 415 (489)
T ss_pred HhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCC
Confidence 6 4789999997632 23 3899999852 578999999999999999999999 99999999999999
Q ss_pred ceEEEecCCHHHHHHHhhccceee--EEECCCccccCCC---CCCcccCCCCCCCCcch
Q 038617 374 LAIYAFTKDETFKKQIVSGTSSGS--LIFNDTLVQQLCD---VLPFGGVGQSGIGRYHG 427 (484)
Q Consensus 374 l~a~v~t~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~~---~~pfGG~~~SG~G~~~g 427 (484)
|++||||+|.++++++++++++|+ |+||..+.+. .. ..||||+|.||+|+++.
T Consensus 416 L~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~-~~~~~~~pfgg~k~sg~g~~~~ 473 (489)
T cd07126 416 LTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGA-PQNHWFGPAGDPRGAGIGTPEA 473 (489)
T ss_pred ceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCC-CcccCcCCCCCCcccCCCCHhH
Confidence 999999999999999999999999 6699877653 33 39999999999998754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-82 Score=707.82 Aligned_cols=421 Identities=21% Similarity=0.339 Sum_probs=389.2
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+++++|++.|++|++.|+.+|.++|.++|++++++|++++++|+.++++|+||+..++. .|+..+++.++|++..
T Consensus 586 ~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~ 664 (1208)
T PRK11905 586 EASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQ 664 (1208)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999996 5999999999999987
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.. ...++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..++++|.++
T Consensus 665 a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eA 729 (1208)
T PRK11905 665 ARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA 729 (1208)
T ss_pred HHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHc
Confidence 765421 13578999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+|+|++|+++| +.+++..|++|+ |+.|+||||+.+|+.|.+.++.+ .+|+++|+|||||+||++ |||+|.|
T Consensus 730 GlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~---dAdle~A 806 (1208)
T PRK11905 730 GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDS---SALPEQV 806 (1208)
T ss_pred CCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcC---CCCHHHH
Confidence 99999999999 556899999997 99999999999999999998876 389999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCc
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA 314 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~ 314 (484)
++.+++|+|. ++||.|++++++|||++++|+|+++|+++++++++||| +.++++||+|++.+.+++.++|+++.+.+.
T Consensus 807 v~~iv~saF~-~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~ 885 (1208)
T PRK11905 807 VADVIASAFD-SAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGR 885 (1208)
T ss_pred HHHHHHHHHh-cCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999876554
Q ss_pred -eeeCCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 315 -IVHGGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 315 -~~~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+..|+... .+|+|+.|||+.. +++.++++|+||||++|++|+ ++||+|+++|+++|||+++|||+|.+.++++
T Consensus 886 ~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~ 963 (1208)
T PRK11905 886 LVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHV 963 (1208)
T ss_pred EEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHH
Confidence 44443221 4699999999973 578889999999999999997 7999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEec
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++|+||||+..++...+.+||||+|.||+|. .+|++++.+|++.|++....
T Consensus 964 ~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905 964 TSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred HHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence 99999999999998876656778999999999995 88999999999999987653
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=646.70 Aligned_cols=416 Identities=20% Similarity=0.262 Sum_probs=366.9
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHh--
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW-- 85 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~-- 85 (484)
+++|++.|++|+++|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..+++.
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~ 79 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW 79 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999999999999999999999998886 59999999999999877642
Q ss_pred hcCccccC-cc--ccCCCcceEEeecceEEEEEccCchhHHH--HHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc-
Q 038617 86 MAPKKRRL-PL--LFFPASGEVVSEPFGVVLICSAWNFPINL--ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP- 159 (484)
Q Consensus 86 ~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~- 159 (484)
........ +. ...+...+++++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~ 159 (454)
T cd07129 80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA 159 (454)
T ss_pred ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 11111000 00 01123457889999999999999999987 55899999999999999999999999999988874
Q ss_pred ---cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc--ccCceeeecCCcCceEEcCCCCCC-
Q 038617 160 ---LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK--HLTPVTLELGGKCPAILDTLSSPL- 230 (484)
Q Consensus 160 ---~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~--~~~~~~lelgG~~p~iV~~~~~da- 230 (484)
++ +|+|++|+++| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++ |+
T Consensus 160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~---da~ 236 (454)
T cd07129 160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILP---GAL 236 (454)
T ss_pred HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeC---Ccc
Confidence 66 99999999999 557899999998 9999999999999999999987 6999999999999999999 99
Q ss_pred --CHHHHHHHHHHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhh
Q 038617 231 --DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307 (484)
Q Consensus 231 --Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~ 307 (484)
|++.|++.+++++|. |+||.|++++|||||++ ++|+|+++|+++++++++ ||++++.+.++..+.++
T Consensus 237 ~~dl~~aa~~i~~~~~~-~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~---------g~~~~~~~~~~~~~~i~ 306 (454)
T cd07129 237 AERGEAIAQGFVGSLTL-GAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA---------QTMLTPGIAEAYRQGVE 306 (454)
T ss_pred hHHHHHHHHHHHHHHhc-CCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC---------CCCcChHHHHHHHHHHH
Confidence 899999999999999 99999999999999999 999999999999998764 46666666677777777
Q ss_pred chhc--CCceeeCCCcCCCCCeeeeEEEeCCC---CCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 038617 308 DPLV--ADAIVHGGLLDKENLFIEPTILLDPP---LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382 (484)
Q Consensus 308 ~a~~--~~~~~~gg~~~~~g~~~~Ptil~~~~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 382 (484)
++.+ ++++++||..+.+|+|++|||+...+ ++|++++||+||||++|++|+|.||+|+++|+++|||++||||+|
T Consensus 307 ~a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d 386 (454)
T cd07129 307 ALAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE 386 (454)
T ss_pred HHHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence 7653 67899999765568999999998655 689999999999999999999999999999999999999999999
Q ss_pred --HHHHHHHhhcc--ceeeEEECCCccccC-CCCCCccc-CCCCCCCCc--chHHHHHHhhhc
Q 038617 383 --ETFKKQIVSGT--SSGSLIFNDTLVQQL-CDVLPFGG-VGQSGIGRY--HGHYSFETFSHE 437 (484)
Q Consensus 383 --~~~~~~~~~~l--~~g~v~iN~~~~~~~-~~~~pfGG-~~~SG~G~~--~g~~~~~~f~~~ 437 (484)
.+.++++++++ ++|+|+||+++.+.. .+.+|||| +|.||.|++ +|.+++++||++
T Consensus 387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 79999999999 699999998765432 25899999 999999999 799999999954
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-80 Score=641.00 Aligned_cols=417 Identities=18% Similarity=0.206 Sum_probs=368.4
Q ss_pred HHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh-c
Q 038617 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM-A 87 (484)
Q Consensus 9 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~-~ 87 (484)
++|+++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||. +.. .|+..+++.+++++.....+. .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~ 79 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP 79 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence 6799999999999999999999999999999999999999999999999999 665 499999999999988776431 1
Q ss_pred CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-c-Ccc
Q 038617 88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-L-DCK 165 (484)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-l-p~g 165 (484)
...............+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ + |+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g 159 (442)
T cd07084 80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159 (442)
T ss_pred ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCcc
Confidence 11110100111235688999999999999999999999999999999999999999999999999999999998 6 999
Q ss_pred ceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC-CHHHHHHHHHHhh
Q 038617 166 AIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL-DIKVTVKRIIGGK 243 (484)
Q Consensus 166 ~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da-Dl~~aa~~i~~~~ 243 (484)
++|+++|+.+.+..|++|+ +|+|+||||+++|+.|++.++. +|+++|+|||||+||++ || |++.|++.+++++
T Consensus 160 ~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~---dadd~~~a~~~i~~~~ 234 (442)
T cd07084 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGP---DAQAVDYVAWQCVQDM 234 (442)
T ss_pred ceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECC---ChhhHHHHHHHHHHHH
Confidence 9999999656888999997 9999999999999999998865 89999999999999999 99 6999999999999
Q ss_pred cccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcC
Q 038617 244 FASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD 322 (484)
Q Consensus 244 ~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~ 322 (484)
|. |+||.|++++++|||++ ++|+|+++|.++++++++| ++.+||++++...+++.+.+++. ++++++||...
T Consensus 235 ~~-~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~~~~i~~a~~~g--ga~~~~gg~~~ 307 (442)
T cd07084 235 TA-CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTTLAMIAHMENLL--GSVLLFSGKEL 307 (442)
T ss_pred hc-ccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHHHHHHHHHHhcC--CcEEEeCCccc
Confidence 99 99999999999999999 9999999999999999887 67899998876666655555431 36888998642
Q ss_pred -------CCCCeeeeEEEeCCCCCC---cccccceecceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 323 -------KENLFIEPTILLDPPLDA---EIMTEEIFGPILPIITLNN--IQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 323 -------~~g~~~~Ptil~~~~~~~---~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
..|+|++|||+.+++++| ++++||+||||++|++|+| ++|||+++|+++|||++||||+|.+.+++++
T Consensus 308 ~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 387 (442)
T cd07084 308 KNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELI 387 (442)
T ss_pred ccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHH
Confidence 148999999999999997 9999999999999999999 9999999999999999999999999999999
Q ss_pred hcc-ceeeEEECCCccccCCCCCCccc-CCCCCCCCcc-hHHHHHHhhhccE
Q 038617 391 SGT-SSGSLIFNDTLVQQLCDVLPFGG-VGQSGIGRYH-GHYSFETFSHEKA 439 (484)
Q Consensus 391 ~~l-~~g~v~iN~~~~~~~~~~~pfGG-~~~SG~G~~~-g~~~~~~f~~~k~ 439 (484)
+++ ++|+|+||+.++....+..|||| .|.||+|++. |.+++++|++...
T Consensus 388 ~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~ 439 (442)
T cd07084 388 GNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHA 439 (442)
T ss_pred HHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeee
Confidence 999 99999999763223455677766 8899999986 9999999997654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=638.19 Aligned_cols=424 Identities=33% Similarity=0.466 Sum_probs=396.2
Q ss_pred HHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Q 038617 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAP 88 (484)
Q Consensus 9 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~ 88 (484)
+++++.|++|++.|++++.++|.++|+++++.|.+++++|+++++.|+||+..+.. .|+..++..+++++...+++.+.
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~ 79 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE 79 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc
Confidence 36899999999999999999999999999999999999999999999999887775 59999999999999888877654
Q ss_pred ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccce
Q 038617 89 KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAI 167 (484)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v 167 (484)
.. .....+.....+++|+|||++|+|||||+..+++.+++||++||+||+|||+.+|.++..+.++|.++ +|++++
T Consensus 80 ~~---~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~ 156 (432)
T cd07078 80 VI---PSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVL 156 (432)
T ss_pred cc---cccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcE
Confidence 32 11123456788999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred eeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcc
Q 038617 168 KVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245 (484)
Q Consensus 168 ~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~ 245 (484)
++++|+. +.+..|+.|+ +|.|.||||..+++.|.+.++++++|+++|+||+||+||++ |+|++.|++.+++++|.
T Consensus 157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~---~ad~~~aa~~i~~~~~~ 233 (432)
T cd07078 157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFD---DADLDAAVKGAVFGAFG 233 (432)
T ss_pred EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECC---CCCHHHHHHHHHHHHHh
Confidence 9999854 4788899987 89999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCceeeCCCcCC
Q 038617 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIVHGGLLDK 323 (484)
Q Consensus 246 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~gg~~~~ 323 (484)
++||.|++++++|||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++. .++++++||..+.
T Consensus 234 -~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~ 312 (432)
T cd07078 234 -NAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLE 312 (432)
T ss_pred -ccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC
Confidence 99999999999999999999999999999999999999 89999999999999999999999876 4678999987654
Q ss_pred --CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617 324 --ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401 (484)
Q Consensus 324 --~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 401 (484)
.|+|+.|||+.+++++++++++|+||||++|++|+++||||+++|+.++||++||||+|.+.++++++++++|+|+||
T Consensus 313 ~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN 392 (432)
T cd07078 313 GGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWIN 392 (432)
T ss_pred CCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEEC
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+.+.+ ..+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 393 ~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 393 DYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 98875 5789999999999999999999999999999874
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-81 Score=590.82 Aligned_cols=465 Identities=28% Similarity=0.427 Sum_probs=426.2
Q ss_pred CCCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 1 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
|+-++.|+|+.+..|++|+++|.+.+...|.++|+.+.+.+-+|.|.+++..++|+||+..++..+||-.+++.+.|.+.
T Consensus 81 p~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~ 160 (583)
T KOG2454|consen 81 PALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLS 160 (583)
T ss_pred ccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhh
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
+.++|+++...+......-...+++++|+||+..|.|||||+.+.+.+++.||.+||++|+|-|+.+..+.....|+++.
T Consensus 161 ~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~ 240 (583)
T KOG2454|consen 161 EGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRA 240 (583)
T ss_pred cchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHH
Confidence 99999988765433222233568999999999999999999999999999999999999999999999999988888776
Q ss_pred c-----cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 161 Y-----LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 161 a-----lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
+ -|++++|++++-.+.+++|.+|+ +++|.|.||..+++.|++.++++++|+++|||||+++||++ |+|++.
T Consensus 241 ~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~d---da~l~~ 317 (583)
T KOG2454|consen 241 ALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICD---DADLSH 317 (583)
T ss_pred HHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEec---cccHHH
Confidence 4 59999999999789999999997 99999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
.+.-+++|.|. .+||.|++.+|++||+++||.|+..|.+++..++.|.| ....|||.+++..+++.++.++++|.+ |
T Consensus 318 v~si~mRGtfQ-SsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KG 396 (583)
T KOG2454|consen 318 VASIAMRGTFQ-SSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKG 396 (583)
T ss_pred HHHHHHhhhhh-hcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhc
Confidence 99999999999 99999999999999999999999999999999999988 788999999999999999999999985 6
Q ss_pred CceeeCCCc-----CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617 313 DAIVHGGLL-----DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK 387 (484)
Q Consensus 313 ~~~~~gg~~-----~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 387 (484)
+++++||.+ .+.|.|+.||++.+++++|+|++||.||||+++..+++.|++|+++|+++|||.++||+.|..+++
T Consensus 397 Arl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~ 476 (583)
T KOG2454|consen 397 ARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCK 476 (583)
T ss_pred chhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHH
Confidence 899999975 256899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC-----cCCCCCCCCCCchHHH-
Q 038617 388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF-----FLELEPRYPPWNDFKM- 461 (484)
Q Consensus 388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~-----~~~~~~~~~p~~~~~~- 461 (484)
+++.+++.|.|.||+....+. -++||||++.||+|+.+|.+|++...+.|+|.+..+ ..+..+.||=|...|-
T Consensus 477 y~a~~lqtG~vAiNDFasfY~-cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~~~~~t~ip~aldypi~~s~kaW 555 (583)
T KOG2454|consen 477 YIASQLQTGVVAINDFASFYM-CQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRVAENATEIPEALDYPIYGSLKAW 555 (583)
T ss_pred HHHhhhhccceeehhhhhhhe-eccccCCccCCCccccccHHHHHHHhcccceeccchhhhhccCCccccccCcChhhHH
Confidence 999999999999999776543 459999999999999999999999999999977643 2356677877765444
Q ss_pred HHHHHHhhh
Q 038617 462 KFLRLAYDF 470 (484)
Q Consensus 462 ~~~~~~~~~ 470 (484)
.++|+|..-
T Consensus 556 ~fvrsli~~ 564 (583)
T KOG2454|consen 556 DFVRSLIDV 564 (583)
T ss_pred HHHHHHHHH
Confidence 455666543
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-79 Score=630.26 Aligned_cols=388 Identities=18% Similarity=0.212 Sum_probs=338.4
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHH
Q 038617 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDK 84 (484)
Q Consensus 5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~ 84 (484)
-+|+++|+++|++||+.|++++.++|.++|++++++|+++.++|++++++|+|||..++.. +.++++.+....
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~-------~~~~~~~~~~~~ 75 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI-------AKNHLAAEKTPG 75 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-------HHHHHHHHhcCc
Confidence 3789999999999999999999999999999999999999999999999999999877643 444554432211
Q ss_pred hhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc----c
Q 038617 85 WMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP----L 160 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~----~ 160 (484)
. ...............+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. +
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 76 T--EDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred c--cccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 0 000000001112345788899999999999999999999999999999999999999999999999999885 5
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.++.|++|+ ||.|+||||+.+|+.|++. .||+++|+|||||+||++ |||++.|++
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~---dADld~Aa~ 226 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDE---TADIEKAAR 226 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEec---CCCHHHHHH
Confidence 5 89999999998 567899999998 9999999999999999875 499999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc---CCc
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV---ADA 314 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~---~~~ 314 (484)
.+++++|. |+||.|++++|+|||+++||+|+++|+++ . .+++++++.+++.++++++.+ +++
T Consensus 227 ~i~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~-------------~~~i~~~~~~~v~~~i~~a~~~~~ga~ 291 (429)
T cd07121 227 DIVQGASF-DNNLPCIAEKEVIAVDSVADYLIAAMQRN-G-------------AYVLNDEQAEQLLEVVLLTNKGATPNK 291 (429)
T ss_pred HHHhcccc-cCCCCCCccceEEEeHHHHHHHHHHHHHC-C-------------CEEcCHHHHHHHHHhhcccCCCccccc
Confidence 99999999 99999999999999999999999999876 1 147899999999999998865 367
Q ss_pred eeeCCCc----CCCCCeee---eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCc--eEEEecCCHHH
Q 038617 315 IVHGGLL----DKENLFIE---PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPL--AIYAFTKDETF 385 (484)
Q Consensus 315 ~~~gg~~----~~~g~~~~---Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~~~ 385 (484)
++.||.. +..|+|+. |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++
T Consensus 292 ~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~ 371 (429)
T cd07121 292 KWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371 (429)
T ss_pred cccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHH
Confidence 8888753 12477877 599999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHhhccceeeEEECCCccccCCCCCCcccCCCCCC--CCcch
Q 038617 386 KKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI--GRYHG 427 (484)
Q Consensus 386 ~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~g 427 (484)
++++++++++|+|+||+++. +.+||||+|.|++ |..-|
T Consensus 372 a~~~a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~ 411 (429)
T cd07121 372 LTKMARAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG 411 (429)
T ss_pred HHHHHhhCCceEEEEcCCCc----CccccCCCccceEEecCCcC
Confidence 99999999999999997643 5689999999998 54434
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-78 Score=627.91 Aligned_cols=403 Identities=16% Similarity=0.209 Sum_probs=346.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
....+|+++++++|++||++|+.++.++|.++|++++++|++++++|++++++|+||+..+++. ..++++++.
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~ 104 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEK 104 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHH
Confidence 3457899999999999999999999999999999999999999999999999999999888764 334444443
Q ss_pred HH--HhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 82 LD--KWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 82 ~~--~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
.. .+.... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 105 ~~~~~~~~~~----~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~ 180 (465)
T PRK15398 105 TPGVEDLTTE----ALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN 180 (465)
T ss_pred hccccccccC----cccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence 32 111111 011122356788899999999999999999999999999999999999999999999999999986
Q ss_pred ----cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCH
Q 038617 160 ----LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 160 ----~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+++|+.|++ ..+|+++|+|||||+||++ |||+
T Consensus 181 ~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~---dADl 253 (465)
T PRK15398 181 EAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDE---TADI 253 (465)
T ss_pred HHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEec---CCCH
Confidence 45 89999999998 667899999998 999999999999999988 3599999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchh-c
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPL-V 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~-~ 311 (484)
+.|++.+++++|. |+||.|++++|||||+++||+|+++|+++. +|++++.+++++.++++++. +
T Consensus 254 d~Aa~~i~~g~~~-n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~--------------~~li~~~~~~~v~~~l~~~~~~ 318 (465)
T PRK15398 254 EKAARDIVKGASF-DNNLPCIAEKEVIVVDSVADELMRLMEKNG--------------AVLLTAEQAEKLQKVVLKNGGT 318 (465)
T ss_pred HHHHHHHHHhccc-CCCCcCCCCceEEEeHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHhhcccc
Confidence 9999999999999 999999999999999999999999998761 27999999999999998653 2
Q ss_pred CCceeeCCCc----CCCCCee---eeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCc--eEEEecCC
Q 038617 312 ADAIVHGGLL----DKENLFI---EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPL--AIYAFTKD 382 (484)
Q Consensus 312 ~~~~~~gg~~----~~~g~~~---~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d 382 (484)
+++++.||.. ...|+++ .|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|
T Consensus 319 ~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d 398 (465)
T PRK15398 319 VNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRN 398 (465)
T ss_pred cchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCC
Confidence 3356666532 1236665 3799999999999999999999999999999999999999999988 99999999
Q ss_pred HHHHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 383 ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 383 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
.++++++++++++|+|+||+++. +.+||||+|.|.+- .+|+.| ...|..|++..+
T Consensus 399 ~~~a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 399 VDNLNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHHHHHHHhCCceEEEECCCCc----cccCcCCCCCceee-ecccCC-CCccchhhhhhh
Confidence 99999999999999999997642 57899999999852 236666 666666655443
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-78 Score=620.04 Aligned_cols=407 Identities=15% Similarity=0.162 Sum_probs=340.6
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMA 87 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 87 (484)
+++|+++|++||+.|+++|+++|.++|++++++|++++++|+++++.|+|||+.+++. ++........ .. .+..
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~--~~---~~~~ 74 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYI--YN---VYKD 74 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHH--HH---HHhc
Confidence 4789999999999999999999999999999999999999999999999999998874 5443332111 11 1111
Q ss_pred CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc----cc-c
Q 038617 88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP----LY-L 162 (484)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~----~a-l 162 (484)
...........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. ++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 110001011113345789999999999999999999999999999999999999999999999999999885 55 9
Q ss_pred CccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617 163 DCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 163 p~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~ 240 (484)
|+|++|+++| +.+.++.|++|+ ||+|.||||+. +++.+++++||+++|+|||||+||++ |||++.|++.++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~---dADl~~Aa~~iv 227 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDE---TADIKRAVQSIV 227 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcC---CCCHHHHHHHHH
Confidence 9999999998 667899999998 99999999997 56677788999999999999999999 999999999999
Q ss_pred HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGL 320 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~ 320 (484)
+++|. |+||.|++.+|+|||+++||+|+++|+++. ||+++.++++++.++|+++.+.+..+.||.
T Consensus 228 ~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~ 292 (439)
T cd07081 228 KSKTF-DNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQPVILKNGDVNRDIVGQD 292 (439)
T ss_pred HHHhc-CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHHhcCCcCCcccCCC
Confidence 99999 999999999999999999999999998763 799999999999999999875433445553
Q ss_pred c----CCCCCeeeeE---EEeCCC--CCCcccccceecceeeeeeeCCHHHHHHHHhcC----CCCceEEEecCC---HH
Q 038617 321 L----DKENLFIEPT---ILLDPP--LDAEIMTEEIFGPILPIITLNNIQESIEFINSR----PKPLAIYAFTKD---ET 384 (484)
Q Consensus 321 ~----~~~g~~~~Pt---il~~~~--~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d---~~ 384 (484)
. ...|+|+.|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+
T Consensus 293 ~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~ 372 (439)
T cd07081 293 AYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIE 372 (439)
T ss_pred HHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHH
Confidence 2 1248899998 998888 999999999999999999999999999999965 899999999999 99
Q ss_pred HHHHHhhccceeeEEECCCc-cccCCCCCCcccCCCC--CCCCcchH-----HHHHHhhhccEEEE
Q 038617 385 FKKQIVSGTSSGSLIFNDTL-VQQLCDVLPFGGVGQS--GIGRYHGH-----YSFETFSHEKAIMQ 442 (484)
Q Consensus 385 ~~~~~~~~l~~g~v~iN~~~-~~~~~~~~pfGG~~~S--G~G~~~g~-----~~~~~f~~~k~v~~ 442 (484)
+++++++++++|+|+||.++ ++.....--|||+..+ |.|..+|. .+..+|++.|.+.+
T Consensus 373 ~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 373 NMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999999999999876 4333334456676654 33443333 34677887776653
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-76 Score=618.48 Aligned_cols=425 Identities=17% Similarity=0.176 Sum_probs=353.2
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-H---HHHHHHHHHHHHHHHHH
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR-D---EIGLIKKSAKYALSCLD 83 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-~---ev~~~~~~~~~~~~~~~ 83 (484)
.++++++|++||+.|+++++.+|.++|++++++|+++.++|+++++.|+|||..++.. + ++...++.+++++....
T Consensus 86 ~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~ 165 (551)
T TIGR02288 86 GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMS 165 (551)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999988741 1 66777888999888776
Q ss_pred HhhcCccccCccccCC---CcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHH----HHHH
Q 038617 84 KWMAPKKRRLPLLFFP---ASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECAS----FLAE 156 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~----~l~~ 156 (484)
++.+......+....+ .....+++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++. .+.+
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e 245 (551)
T TIGR02288 166 RIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVARE 245 (551)
T ss_pred hccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHH
Confidence 6543211000100001 12235789999999999999999999999999999999999999999998655 6678
Q ss_pred Hhccc-cCccceeeccC--ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCH
Q 038617 157 TIPLY-LDCKAIKVTNG--GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 157 ~l~~a-lp~g~v~~v~g--~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
++.++ +|+|+||+++| +.+.++.|+.|+ |+.|.||||+.+|+.|.+.++ .+++++|+|||||+||++ |+|+
T Consensus 246 ~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~lElGGknp~IV~~---dADl 320 (551)
T TIGR02288 246 VLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYTEKAGVNTVIIES---TDDY 320 (551)
T ss_pred HHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEeecCCcCeEEEcC---CCCH
Confidence 89898 99999999998 357899999998 999999999999999998876 489999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccc---------hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHH
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKK---------FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERL 302 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~ 302 (484)
+.|++.+++++|. |+||.|++++|+|||++ +||+|++.|++++.++ +||| ++.+++||++++.+++++
T Consensus 321 d~aa~~i~~~~f~-~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri 398 (551)
T TIGR02288 321 KAMLRNLAFSLSL-YSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI 398 (551)
T ss_pred HHHHHHHHHHHHh-hCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH
Confidence 9999999999999 99999999999999999 7999999999999999 8998 778899999999999997
Q ss_pred HHHhhchhcCCceeeCCCcC----CCC-CeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcC--CCC-c
Q 038617 303 RKLLKDPLVADAIVHGGLLD----KEN-LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR--PKP-L 374 (484)
Q Consensus 303 ~~~i~~a~~~~~~~~gg~~~----~~g-~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~--~~g-l 374 (484)
.+.++ .+++++||... .+| +|+.|||+...+++|++++||+||||++|++|+|.||||+++|++ +|| |
T Consensus 399 ~~a~~----~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~L 474 (551)
T TIGR02288 399 AEARA----LGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAM 474 (551)
T ss_pred HHHHh----CCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCc
Confidence 65544 44777777532 135 588999995444599999999999999999999999999999998 566 9
Q ss_pred eEEEecCCHHHHHHHhhcc--ceeeEEECCCccccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEEEe
Q 038617 375 AIYAFTKDETFKKQIVSGT--SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIMQR 443 (484)
Q Consensus 375 ~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~~~ 443 (484)
++||||+|.+.++++.+++ ..|.++||....-+.+...||++...||..... ..+.--.|...|.-..+
T Consensus 475 ta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~~~~~~r~~~~~ 546 (551)
T TIGR02288 475 TVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSDGAFVANRFRVVQ 546 (551)
T ss_pred eEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccchhhhhcceEEEE
Confidence 9999999999999999998 234444443322222334568888888887554 33445556655544333
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-75 Score=610.46 Aligned_cols=426 Identities=16% Similarity=0.203 Sum_probs=364.6
Q ss_pred HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH----HHHHHHHHHHHHHHHHH
Q 038617 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR----DEIGLIKKSAKYALSCL 82 (484)
Q Consensus 7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~----~ev~~~~~~~~~~~~~~ 82 (484)
|+++++++|++|++.|+++++++|.++|.+++++|++++++|+++++.|+||+..++.. .|+..+++.++|+.+..
T Consensus 85 dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~ 164 (549)
T cd07127 85 DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREM 164 (549)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999987753 27999999999998887
Q ss_pred HHhhcCccccCc-cc--cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHH----HHH
Q 038617 83 DKWMAPKKRRLP-LL--FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECAS----FLA 155 (484)
Q Consensus 83 ~~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~----~l~ 155 (484)
.++.....-..+ .. ........+++|+||+++|+|||||+++.+.++++||++||+||+|||+.+|+++. .+.
T Consensus 165 ~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~ 244 (549)
T cd07127 165 SRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAR 244 (549)
T ss_pred HhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHH
Confidence 765321100000 00 00112245789999999999999999999999999999999999999999998764 456
Q ss_pred HHhccc-cCccceeeccCC--hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCC
Q 038617 156 ETIPLY-LDCKAIKVTNGG--VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLD 231 (484)
Q Consensus 156 ~~l~~a-lp~g~v~~v~g~--~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daD 231 (484)
++|.++ +|+|+||+++|+ .+.++.|++|+ ++.|.||||+.+|+.|.+.++ .+|+++|+|||||+||++ |+|
T Consensus 245 ~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~--~~~v~~ElGGkn~~IV~~---dAD 319 (549)
T cd07127 245 EVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR--QAQVYTEKAGVNTVVVDS---TDD 319 (549)
T ss_pred HHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc--cCcEEEecCCcCeEEECC---CCC
Confidence 888888 999999999983 57899999998 999999999999999999886 389999999999999999 999
Q ss_pred HHHHHHHHHHhhcccCCCCccccCCceEEccc---------hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHH
Q 038617 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKK---------FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFER 301 (484)
Q Consensus 232 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~ 301 (484)
++.+++.+++++|. |+||.|++++|+|||++ +||+|++.|+++++++ +||| +..+.+||++++.++++
T Consensus 320 l~~aa~~i~~~~f~-~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~r 397 (549)
T cd07127 320 LKAMLRNLAFSLSL-YSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLAR 397 (549)
T ss_pred HHHHHHHHHHHHHc-cCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHH
Confidence 99999999999999 99999999999999999 8999999999999999 8888 78899999999999999
Q ss_pred HHHHhhchhcCCceeeCCCcCC----CCC-eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCC--C-C
Q 038617 302 LRKLLKDPLVADAIVHGGLLDK----ENL-FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP--K-P 373 (484)
Q Consensus 302 ~~~~i~~a~~~~~~~~gg~~~~----~g~-~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~--~-g 373 (484)
+.+.++ .+++++||.... .|+ |+.|||+..++++|++++||+||||++|++|+|.||||+++|++. + |
T Consensus 398 i~~a~~----~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~gg 473 (549)
T cd07127 398 IAEARQ----LGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGA 473 (549)
T ss_pred HHHHHh----CCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCC
Confidence 987664 455888876421 344 569999998889999999999999999999999999999999974 4 6
Q ss_pred ceEEEecCCHHHHHHHhhc-ccee-eEEECCCccccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEEEe
Q 038617 374 LAIYAFTKDETFKKQIVSG-TSSG-SLIFNDTLVQQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIMQR 443 (484)
Q Consensus 374 l~a~v~t~d~~~~~~~~~~-l~~g-~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~~~ 443 (484)
|++||||+|.+.++++.++ .++| .++||.....+.+..+||||...||..... ..+..-.|...|--..+
T Consensus 474 Lt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~~~~ 546 (549)
T cd07127 474 MTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFRVVQ 546 (549)
T ss_pred ceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceEEEE
Confidence 9999999999999999998 4555 999995543334445669999999998655 44556667766654443
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=601.35 Aligned_cols=411 Identities=15% Similarity=0.117 Sum_probs=353.4
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
.+.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+||+..+++..+.......+.+++...
T Consensus 5 ~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~ 84 (488)
T TIGR02518 5 YSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDM 84 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhC
Confidence 57889999999999999999999999999999999999999999999999999999988875423333444444443322
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh----
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI---- 158 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l---- 158 (484)
+. . .......+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+++++
T Consensus 85 ~~-~-----G~~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l 158 (488)
T TIGR02518 85 KT-I-----GILSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAA 158 (488)
T ss_pred cc-c-----ceecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHH
Confidence 11 1 1111122345678899999999999999999999999999999999999999999999999865554
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
.++ +|+|+||++++ +.+.++.|++|+ ||+|+||||+.+++. ++.+++|+++|+|||+|+||++ |||++.|
T Consensus 159 ~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~~~~pv~~e~gGn~p~iV~~---dADld~A 231 (488)
T TIGR02518 159 EEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYSSGTPAIGVGPGNGPAYIER---TANVKKA 231 (488)
T ss_pred HHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHHcCCCEEEEcCCCCeEEEeC---CCCHHHH
Confidence 676 99999999998 678899999997 999999999996644 4556799999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHH-------HHhhcCCCC--CCCCccccccCHHHHHHHHHHh
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTT-------IKKFYGENP--KDSKSISRIINEYHFERLRKLL 306 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i 306 (484)
++.+++++|+ |+||.|++.+|+|||+++||+|+++|+++ .+.+++|+| ++++++||+++.++++++.+++
T Consensus 232 a~~iv~sk~~-~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i 310 (488)
T TIGR02518 232 VRDIIDSKTF-DNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLA 310 (488)
T ss_pred HHHHHHHHhc-CCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHh
Confidence 9999999999 99999999999999999999999999998 888888885 5788999999999999999999
Q ss_pred hchhc-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhc----CCCCceEEEecC
Q 038617 307 KDPLV-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS----RPKPLAIYAFTK 381 (484)
Q Consensus 307 ~~a~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v~t~ 381 (484)
+++.. ++++++||.. .+++++++ .+|+||||++|++|+|+||||+++|+ ++|||+++|||+
T Consensus 311 ~~av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~ 376 (488)
T TIGR02518 311 GLTVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSE 376 (488)
T ss_pred ccccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeC
Confidence 99874 7889988742 35677885 79999999999999999999999887 699999999999
Q ss_pred CHHHHHHHhhccceeeEEECCCccc---------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 382 DETFKKQIVSGTSSGSLIFNDTLVQ---------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 382 d~~~~~~~~~~l~~g~v~iN~~~~~---------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|.+++++|++++++|+|+||++..+ .....+.||+++.+++. .+-|++++++.|+|...-
T Consensus 377 d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 377 NKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 9999999999999999999964321 12233448888877776 389999999999987653
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-75 Score=598.97 Aligned_cols=387 Identities=20% Similarity=0.217 Sum_probs=328.5
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhH-------HHHHHHHH
Q 038617 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYR-------DEIGLIKK 73 (484)
Q Consensus 5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~-------~ev~~~~~ 73 (484)
.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+. .++.. .|+..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999998887764 34432 36666666
Q ss_pred HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
.+++++...+.. + ..........+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.|+.+
T Consensus 83 ~~~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~ 158 (417)
T PRK00197 83 GLRQVAALPDPV-G-EVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA 158 (417)
T ss_pred HHHHHhhcCCCc-c-ccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence 666665443221 1 1100000011235688999999999999986 4 7788999999999999999999999999999
Q ss_pred HHHHh----ccc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 154 LAETI----PLY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 154 l~~~l----~~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
+++++ .++ +|+|++|+++| +.+ .+..|..|+ +|+|+||||+.+|+.|++.+ +||+++|+|||||+||++
T Consensus 159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~ 235 (417)
T PRK00197 159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDE 235 (417)
T ss_pred HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeC
Confidence 99886 466 99999999996 544 566677787 99999999999999998865 599999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~ 305 (484)
|||++.|++.+++++|. |+| .|++++|+|||+++||+|+++|+++++++.++
T Consensus 236 ---dAdl~~Aa~~iv~~~~~-n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------- 287 (417)
T PRK00197 236 ---SADLDKALKIVLNAKTQ-RPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------- 287 (417)
T ss_pred ---CCCHHHHHHHHHHhccC-CCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-----------------------
Confidence 99999999999999999 999 99999999999999999999999999876431
Q ss_pred hhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 038617 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETF 385 (484)
Q Consensus 306 i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 385 (484)
++ ||... .+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 288 ---------~~-~~~~~-~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~ 351 (417)
T PRK00197 288 ---------LR-GDEAA-LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAA 351 (417)
T ss_pred ---------Ee-cCHHH-HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHH
Confidence 11 11100 12 23 9998 4689999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEec
Q 038617 386 KKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG----RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 386 ~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++++++|+|+||+++.+ .+..||||.+.||+| +++|.+|+++|++.|++++..
T Consensus 352 ~~~~~~~l~~G~v~VN~~~~~--~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 352 AERFLNEVDSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HHHHHHhCCeeEEEEeCCCcc--CCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 999999999999999987653 456899999999999 999999999999999998753
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-75 Score=596.21 Aligned_cols=381 Identities=20% Similarity=0.231 Sum_probs=323.0
Q ss_pred HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChh----hhhH-------HHHHHHHHHHHHH
Q 038617 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV----ETYR-------DEIGLIKKSAKYA 78 (484)
Q Consensus 10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~~-------~ev~~~~~~~~~~ 78 (484)
..+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.. ++.. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999777766643 3332 2666666666665
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
+...+ ..+ ..........+...+++++|+|||++|+|| +| .++++++++||++||+||+|||+.+|.++..+++++
T Consensus 82 a~~~~-~~g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 157 (406)
T cd07079 82 AALPD-PVG-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII 157 (406)
T ss_pred HhcCC-CCc-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence 54322 111 100000001123567899999999999996 56 778899999999999999999999999999999998
Q ss_pred c----cc-cCccceeeccC-Ch-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC
Q 038617 159 P----LY-LDCKAIKVTNG-GV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL 230 (484)
Q Consensus 159 ~----~a-lp~g~v~~v~g-~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da 230 (484)
. ++ +|+|++|+++| +. +.++.|..|+ +|+|+||||+.+|+.|++.+ ++|+++|||||||+||++ ||
T Consensus 158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~---dA 231 (406)
T cd07079 158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDE---SA 231 (406)
T ss_pred HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeC---CC
Confidence 7 56 99999999998 45 4577777887 99999999999999998876 699999999999999999 99
Q ss_pred CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchh
Q 038617 231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPL 310 (484)
Q Consensus 231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~ 310 (484)
|++.|++.+++++|. |+| .|++++|||||+++||+|+++|++++.+.
T Consensus 232 Dl~~Aa~~i~~~~f~-n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~------------------------------- 278 (406)
T cd07079 232 DLEMAVRIVVNAKTQ-RPS-VCNALETLLVHRDIAEEFLPKLAEALREA------------------------------- 278 (406)
T ss_pred CHHHHHHHHHHcccC-CCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC-------------------------------
Confidence 999999999999999 999 99999999999999999999999887642
Q ss_pred cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 311 VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 311 ~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
+++++ ||... ..|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus 279 -ga~~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~ 350 (406)
T cd07079 279 -GVELR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFL 350 (406)
T ss_pred -CCEEe-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHH
Confidence 33433 33221 1377888 7889999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCC----CCcchHHHHHHhhhccEEEEe
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI----GRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++++|+|+||+++.. .+.+||||.+.||. |+++|.+++++|++.|++++.
T Consensus 351 ~~~~~G~v~iN~~~~~--~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~ 405 (406)
T cd07079 351 REVDSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG 405 (406)
T ss_pred HhCCeeEEEEeCCCcc--cCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence 9999999999987653 45689999999988 899999999999999998764
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=592.09 Aligned_cols=369 Identities=17% Similarity=0.165 Sum_probs=319.8
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHH-HHHHHHHHHHHhh
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK-SAKYALSCLDKWM 86 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~-~~~~~~~~~~~~~ 86 (484)
+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||+.+++..|+...++ .++++... ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 478999999999999999999999999999999999999999999999999999887546666655 45555431 111
Q ss_pred cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc----cc-
Q 038617 87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP----LY- 161 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~----~a- 161 (484)
. . . ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. ++
T Consensus 79 g-~---~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG 153 (436)
T cd07122 79 G-V---I-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153 (436)
T ss_pred e-e---e-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence 0 0 1 11123356789999999999999999999999999999999999999999999999999888875 56
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+++++ .++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~---dADl~~A~~~i 226 (436)
T cd07122 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDE---TADIKRAVKDI 226 (436)
T ss_pred CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcC---CCCHHHHHHHH
Confidence 99999999998 667899999998 99999999999764 45677899999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhh-------cCCCC--CCCCccccccCHHHHHHHHHHhhchh
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-------YGENP--KDSKSISRIINEYHFERLRKLLKDPL 310 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~ 310 (484)
++++|. |+||.|++++|+|||+++||+|+++|+++...+ +++++ +.++.+||+++..+.+++.+++..+.
T Consensus 227 ~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~ 305 (436)
T cd07122 227 ILSKTF-DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEV 305 (436)
T ss_pred HHHhhc-cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCC
Confidence 999999 999999999999999999999999999988765 66665 45677899998888888877766543
Q ss_pred c-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcC----CCCceEEEecCCHHH
Q 038617 311 V-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR----PKPLAIYAFTKDETF 385 (484)
Q Consensus 311 ~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d~~~ 385 (484)
. +++++.|+ +++++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++
T Consensus 306 ~~ga~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~ 371 (436)
T cd07122 306 PEDTKVLVAE-------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEV 371 (436)
T ss_pred CCCCeEEEEe-------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHH
Confidence 3 33444333 56888999987 56799999999999999999999997 899999999999999
Q ss_pred HHHHhhccceeeEEECCCcc
Q 038617 386 KKQIVSGTSSGSLIFNDTLV 405 (484)
Q Consensus 386 ~~~~~~~l~~g~v~iN~~~~ 405 (484)
++++++++++|+|+||+++.
T Consensus 372 a~~~~~~l~aG~V~IN~~~~ 391 (436)
T cd07122 372 IEEFALRMPVSRILVNTPSS 391 (436)
T ss_pred HHHHHhhCCceEEEEeCCcc
Confidence 99999999999999998764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-73 Score=616.32 Aligned_cols=385 Identities=20% Similarity=0.210 Sum_probs=334.8
Q ss_pred HHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHHcC--CChhhhh---HHHHHHHHHH
Q 038617 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKAL------HQDLG--KHPVETY---RDEIGLIKKS 74 (484)
Q Consensus 6 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~ea~---~~ev~~~~~~ 74 (484)
+.+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++ ++|+| ||+.++. ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 8877764 3599999999
Q ss_pred HHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617 75 AKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFL 154 (484)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l 154 (484)
+++++.. ....+.. ........+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|.++..|
T Consensus 374 ~~~~a~~-~~~~g~~-~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l 449 (718)
T PLN02418 374 IRQLADM-EDPIGRV-LKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAIL 449 (718)
T ss_pred HHHHhcC-ccccCcc-ccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHH
Confidence 9999876 3332211 11000112234678999999999999999 99999 8999999999999999999999999999
Q ss_pred HHHhccccCccc----eeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCC
Q 038617 155 AETIPLYLDCKA----IKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSP 229 (484)
Q Consensus 155 ~~~l~~alp~g~----v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~d 229 (484)
++++.+++|+|+ +|+++|+.+.++.|..|+ ||+|+||||+.. +.+.++.++||+++|+|||||+||++ |
T Consensus 450 ~~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~---D 523 (718)
T PLN02418 450 HKVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDK---S 523 (718)
T ss_pred HHHHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeC---C
Confidence 999999999996 999998667888999997 999999999964 44456667899999999999999999 9
Q ss_pred CCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhch
Q 038617 230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP 309 (484)
Q Consensus 230 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a 309 (484)
||++.|++.+++++|. | ||.|++.+|+|||+++||+ | .+.++|+++
T Consensus 524 ADld~A~~~i~~~~~~-n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a 569 (718)
T PLN02418 524 ADMDMAKRIVVDAKTD-Y-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVAL 569 (718)
T ss_pred CCHHHHHHHHHHHhCC-C-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHH
Confidence 9999999999999999 8 9999999999999999987 1 246778887
Q ss_pred hc-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 310 LV-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 310 ~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
.+ |+++ +||.... | ++. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+++.+
T Consensus 570 ~~~Ga~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~ 639 (718)
T PLN02418 570 RSAGVTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEI 639 (718)
T ss_pred HHCCCEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHH
Confidence 64 6677 7875432 3 233 3 789999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCC--CCcc--hHHHHHHhhhccEEEEecCc
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI--GRYH--GHYSFETFSHEKAIMQRSFF 446 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~--g~~~~~~f~~~k~v~~~~~~ 446 (484)
+++++++|.|+||+++.. .+..||||+|.||+ |+++ |++|+++|++.|++++....
T Consensus 640 ~a~~l~aG~V~IN~~~~~--~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~ 699 (718)
T PLN02418 640 FLRQVDSAAVFHNASTRF--SDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQ 699 (718)
T ss_pred HHHhCCeeEEEEeCCCCC--CCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCe
Confidence 999999999999987643 45679999999999 9875 99999999999999988754
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-73 Score=632.37 Aligned_cols=411 Identities=16% Similarity=0.150 Sum_probs=355.3
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++..+...+.. ..
T Consensus 9 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~-------~~ 81 (862)
T PRK13805 9 TNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASE-------YI 81 (862)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH-------HH
Confidence 67899999999999999999999999999999999999999999999999999999998876423322222 22
Q ss_pred HHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc-
Q 038617 83 DKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL- 160 (484)
Q Consensus 83 ~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~- 160 (484)
..+...+.. ...........+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 82 YNSYKDEKTVGVIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred HHHhcCCCcccccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 222211111 111111233567889999999999999999999999999999999999999999999999999999864
Q ss_pred ---c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 161 ---Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 161 ---a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
+ +|+|+||+++| +.+.++.|++|+ ||+|+||||+.++ +.++++++|+++|+|||||+||++ |||++.
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~---dADl~~ 234 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDK---TADIKR 234 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeC---CCCHHH
Confidence 4 99999999998 778899999998 9999999999865 455678999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCC-
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVAD- 313 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~- 313 (484)
|++.|++++|+ |+||.|+++++||||+++||+|+++|+++. +|++++.+++++.++++++.+++
T Consensus 235 Aa~~i~~~k~~-n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------------~~l~~~~~~~~v~~~i~~a~~~~~ 299 (862)
T PRK13805 235 AVNDILLSKTF-DNGMICASEQAVIVDDEIYDEVKEEFASHG--------------AYFLNKKELKKLEKFIFGKENGAL 299 (862)
T ss_pred HHHHHHHhhhc-cCCCccCCCceEEEehhhHHHHHHHHHHhC--------------CeeCCHHHHHHHHHHHhhccCCCc
Confidence 99999999999 999999999999999999999999988762 58999999999999999875432
Q ss_pred c-eeeCCCcC----CCCCeeeeEE------EeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhc----CCCCceEEE
Q 038617 314 A-IVHGGLLD----KENLFIEPTI------LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS----RPKPLAIYA 378 (484)
Q Consensus 314 ~-~~~gg~~~----~~g~~~~Pti------l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v 378 (484)
. .+.||... ..|+++.||+ +.+++++|++++ |+||||++|++|+|+||||+++|+ ++|||+++|
T Consensus 300 ~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i 378 (862)
T PRK13805 300 NADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVI 378 (862)
T ss_pred CccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 1 24465321 2478889987 678999999876 799999999999999999999988 589999999
Q ss_pred ecCCHHHHHHHhhccceeeEEECCCccc--------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 379 FTKDETFKKQIVSGTSSGSLIFNDTLVQ--------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 379 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~--------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
||+|.+.+++|++++++|+|+||.++.+ ...+.+|||| |.||+|.++|+.|+++|++.|+|..+.
T Consensus 379 ~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 379 YTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred ECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence 9999999999999999999999987522 3578899998 999999999999999999999998764
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-70 Score=540.48 Aligned_cols=416 Identities=22% Similarity=0.345 Sum_probs=379.4
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
++.+|+++|++.|..|+..|..+|+++|+.+|++++++++.+..+|..++++|.||+...+. .|+..+++.++||+...
T Consensus 147 a~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naI-AEVREAVDFlrYYA~~a 225 (769)
T COG4230 147 ATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQA 225 (769)
T ss_pred cCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH-HHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999996 59999999999999887
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY- 161 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a- 161 (484)
+.-++. ....|+|.+.+|+|||||+.+....++.||++||+|+-||.+++|+.+..-+++++++
T Consensus 226 r~~~g~---------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAG 290 (769)
T COG4230 226 RDTFGN---------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAG 290 (769)
T ss_pred hcccCc---------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcC
Confidence 642211 2467999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-c--cCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 162 LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-H--LTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 162 lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~--~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
+|++++|+++|+ ..++..|+.++ ++.|+||||+++++.|.+..++ + ..|++.|.||-|.+|||. +|--|.++
T Consensus 291 vP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDS---sAL~EQVv 367 (769)
T COG4230 291 VPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDS---SALAEQVV 367 (769)
T ss_pred CChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeec---hhhHHHHH
Confidence 999999999995 46899999986 9999999999999999988776 3 478999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCce
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAI 315 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~ 315 (484)
.+++.|+|. .+||+|++.+.+++++++.|..+++|+-++.++++|+| .-.+|+||+|+.++...++++|+.....++.
T Consensus 368 ~Dvl~SAFd-SAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~ 446 (769)
T COG4230 368 ADVLASAFD-SAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRL 446 (769)
T ss_pred HHHHHHHhh-cccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccc
Confidence 999999999 99999999999999999999999999999999999999 6789999999999999999999877655655
Q ss_pred eeCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 316 VHGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 316 ~~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++--..+ .+|.|+.||++.-.+-+ -++.|+||||+.|++|+ ++++.|+-+|.++||||.+|||+-.+.+.++.
T Consensus 447 v~q~~~~~~~q~GtFv~Ptl~El~~~~--eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~ 524 (769)
T COG4230 447 VHQAAAPNSLQKGTFVAPTLIELENLD--ELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVT 524 (769)
T ss_pred hhhccCCCccCCceeeCceeEEcCCHH--HHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHH
Confidence 4332222 36999999999743333 36899999999999996 78999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCc-chHHHHHHhhhccEE
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY-HGHYSFETFSHEKAI 440 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~~k~v 440 (484)
+++++|++|||....++....+||||.|.||+|.. +|+.-+..|...+..
T Consensus 525 ~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 525 ERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred hhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 99999999999998888888999999999999965 689999999877664
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-70 Score=556.93 Aligned_cols=373 Identities=15% Similarity=0.107 Sum_probs=326.4
Q ss_pred HHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh----------HHHHHHHHHHHHHHHHHH
Q 038617 13 AELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY----------RDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 13 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~----------~~ev~~~~~~~~~~~~~~ 82 (484)
++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||++.+.. ..|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 126777777777666543
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY- 161 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a- 161 (484)
.+..... .. .....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 81 ~~~~~~~-----~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~ 153 (397)
T cd07077 81 GHIQDVL-----LP-DNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153 (397)
T ss_pred CcccceE-----ec-CCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence 2221110 01 12356889999999999999999999 9999999999999999999999999999999998763
Q ss_pred ---cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 162 ---LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 162 ---lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
+|++++++++| +.+.++.|++|+ +|.|+||||+.+++.+.+.+. ++|+++|+||++|+||++ |||++.|+
T Consensus 154 ~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~---dad~~~a~ 228 (397)
T cd07077 154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDE---TADEERAS 228 (397)
T ss_pred hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcC---CCCHHHHH
Confidence 89999999997 667889999998 999999999999999988773 699999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCcee
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIV 316 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~ 316 (484)
+.+++++|. | ||.|+++++||||+++||+|+++|.+++.. .|+++.
T Consensus 229 ~~~~~~~~~-~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------~G~~~~ 274 (397)
T cd07077 229 GSVHDSKFF-D-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------EGLKVP 274 (397)
T ss_pred HHHHHhhcc-C-CccCCCCeEEEEehhhhHHHHHHHHHHHHh--------------------------------cCcCcC
Confidence 999999999 9 999999999999999999999999988863 245566
Q ss_pred eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHH----HHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ----ESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~----eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
.||. +.|+.|| ++|++.+||+||||++|++|+|+| +|++++|+++|||+++|||+|.+++++++++
T Consensus 275 ~g~~----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~ 344 (397)
T cd07077 275 QETK----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQY 344 (397)
T ss_pred CCce----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHh
Confidence 5552 4677776 788999999999999999999996 6677889999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCC--CCCCCCcch-HHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVG--QSGIGRYHG-HYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~--~SG~G~~~g-~~~~~~f~~~k~v~ 441 (484)
+++|+|+||++..+.....+||||++ .||+|+++| .+++++|++.|++.
T Consensus 345 l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 345 IDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred CCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999999998765444778999999 899999999 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-68 Score=542.14 Aligned_cols=362 Identities=36% Similarity=0.528 Sum_probs=337.4
Q ss_pred HHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCccccC
Q 038617 14 ELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRL 93 (484)
Q Consensus 14 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (484)
+|++|+.+|++++.++|.++|+++++.|.++.++|+++++.|+||+..++. .|+..+++.++++++..+++.+.. .
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~---~ 77 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPE---L 77 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc---c
Confidence 588999999999999999999999999999999999999999999999887 499999999999998887765422 1
Q ss_pred ccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccceeeccC
Q 038617 94 PLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNG 172 (484)
Q Consensus 94 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v~~v~g 172 (484)
.....+....++++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..|.+++.++ +|++++++++|
T Consensus 78 ~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~ 157 (367)
T cd06534 78 PSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPG 157 (367)
T ss_pred cccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEc
Confidence 12233456788999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred Ch-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCC
Q 038617 173 GV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQ 250 (484)
Q Consensus 173 ~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq 250 (484)
+. +.++.|+.|+ +|.|+||||+++++.|.+.++++++|+++|+||+|++||++ |+|++.|++.+++++|. ++||
T Consensus 158 ~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~---~ad~~~aa~~i~~~~~~-~~gq 233 (367)
T cd06534 158 GGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDE---DADLDAAVEGAVFGAFF-NAGQ 233 (367)
T ss_pred CchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECC---CCCHHHHHHHHHHHHHh-cCCC
Confidence 54 5888999997 99999999999999999999999999999999999999999 99999999999999999 9999
Q ss_pred ccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeeee
Q 038617 251 VCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEP 330 (484)
Q Consensus 251 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~P 330 (484)
.|+++++||||++++|+|+++|+
T Consensus 234 ~C~s~~~v~v~~~~~~~f~~~l~--------------------------------------------------------- 256 (367)
T cd06534 234 ICTAASRLLVHESIYDEFVEKLV--------------------------------------------------------- 256 (367)
T ss_pred CCCCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------
Confidence 99999999999999999998886
Q ss_pred EEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCCC
Q 038617 331 TILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCD 410 (484)
Q Consensus 331 til~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~ 410 (484)
||+.+++++++++++|+||||++|++|++++||++++|++++||++||||+|.+.++++++++++|+|+||+.+.+. .+
T Consensus 257 tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~ 335 (367)
T cd06534 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GP 335 (367)
T ss_pred eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CC
Confidence 67777888999999999999999999999999999999999999999999999999999999999999999988653 78
Q ss_pred CCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 411 VLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 411 ~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
.+||||.+.||+|+++|++++++|++.|++.
T Consensus 336 ~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 336 EAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 8999999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-68 Score=577.85 Aligned_cols=384 Identities=18% Similarity=0.200 Sum_probs=316.7
Q ss_pred HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh--------HHHHHHHHHHHHHH
Q 038617 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY--------RDEIGLIKKSAKYA 78 (484)
Q Consensus 7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~--------~~ev~~~~~~~~~~ 78 (484)
+++..+++|++||++|+.+|.++|.++|++++++|++++++|++ |+||++.+++ ..|+.....+++++
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~~----e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEILA----ENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 48888999999999999999999999999999999999999974 6666665443 23455555556666
Q ss_pred HHHHHHhhcCcccc--Cc---cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 79 LSCLDKWMAPKKRR--LP---LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 79 ~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
+..++.+.+..... .. ....+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.|+..
T Consensus 363 ~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~ 440 (715)
T TIGR01092 363 AISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAI 440 (715)
T ss_pred HHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHH
Confidence 66666554321100 00 0111223467899999999999999 9998 5899999999999999999999999999
Q ss_pred HHHHhccccCcc----ceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCC
Q 038617 154 LAETIPLYLDCK----AIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSS 228 (484)
Q Consensus 154 l~~~l~~alp~g----~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~ 228 (484)
|++++.+++|+| ++|++++..+.++.|..|+ +|+|+||||+.+|+.|++.++ +|+++|+|||||+||++
T Consensus 441 l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~--- 514 (715)
T TIGR01092 441 LHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK--- 514 (715)
T ss_pred HHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC---
Confidence 999999999987 6899986555677777776 999999999999999998874 99999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhc
Q 038617 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD 308 (484)
Q Consensus 229 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~ 308 (484)
|||++.|++.+..++|. +||.|+|++|||||+++||+ | .+.+++++
T Consensus 515 dADl~~A~~~i~~~~~~--~GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v~~ 560 (715)
T TIGR01092 515 SASVDMAKRIVRDAKCD--YPAACNAMETLLVHKDLLRN------------------------G--------LLDDLIDM 560 (715)
T ss_pred CCCHHHHHHHHHHHhCC--CCCccccCcEEEEehhhccc------------------------h--------hHHHHHHH
Confidence 99999998777777765 59999999999999999985 0 13344444
Q ss_pred hh-cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617 309 PL-VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK 387 (484)
Q Consensus 309 a~-~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 387 (484)
+. +|+++ +||.... .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus 561 ~~~~Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~ 632 (715)
T TIGR01092 561 LRTEGVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAE 632 (715)
T ss_pred HHHCCCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHH
Confidence 43 25555 5775432 2332 23578999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCC----cchHHHHHHhhhccEEEEecCc
Q 038617 388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR----YHGHYSFETFSHEKAIMQRSFF 446 (484)
Q Consensus 388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~f~~~k~v~~~~~~ 446 (484)
+|++++++|.|+||+++. ..+.+||||+|.||+|+ .+|++++++|++.|+|.+....
T Consensus 633 ~~~~~i~sG~V~vN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~ 693 (715)
T TIGR01092 633 FFLQHVDSAAVFHNASTR--FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQ 693 (715)
T ss_pred HHHHhCCeeEEEEeCCCC--CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCe
Confidence 999999999999998754 34678999999999995 4799999999999999887643
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-68 Score=539.69 Aligned_cols=374 Identities=20% Similarity=0.198 Sum_probs=310.6
Q ss_pred HHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHHcCCCh------hhhhHHHHHHHHHHHHHHHHHH
Q 038617 15 LRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKA------LHQDLGKHP------VETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 15 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
|++||+.|+++|.++|.++|++++++|++++++|+++ +++|+|||. .++. .|+..+++.++++++..
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a 79 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELA 79 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999999999 999999993 2344 48999999999888766
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh----
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI---- 158 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l---- 158 (484)
+.+ + +.........+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..+++++
T Consensus 80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 432 2 1111100112446688999999999999997 6 678889999999999999999999999999999995
Q ss_pred ccc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+++| +.+ .++.|..|+ ||+|+||||+.+|+.+++. ..+|+++|+|||||+||++ |||++.
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~---dADl~~ 229 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDE---SADLIK 229 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeC---CCCHHH
Confidence 477 99999999997 554 677788887 9999999999999988764 3589999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCc
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADA 314 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~ 314 (484)
|++.+++++|. + ||.|++++|+|||+++||+|+++|++++.++.. .+++ .+.+.+++..
T Consensus 230 Aa~~iv~~~~~-~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~~~v~~------ 288 (398)
T TIGR00407 230 AIKVIVNAKTQ-R-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYALKLLEL------ 288 (398)
T ss_pred HHHHHHhhhcC-C-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHHHHHhc------
Confidence 99999999997 6 999999999999999999999999999987532 1221 1334444431
Q ss_pred eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
|| ||++ + .+|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++++++
T Consensus 289 ---g~----------~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~ 352 (398)
T TIGR00407 289 ---GP----------ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVD 352 (398)
T ss_pred ---cC----------cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCC
Confidence 11 3554 2 337899999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCC----CCCCCcchHHHHHHhhhcc
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQ----SGIGRYHGHYSFETFSHEK 438 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~----SG~G~~~g~~~~~~f~~~k 438 (484)
+|.|+||+++. ..+..|||=-.. ++.....|+.+++.|+..|
T Consensus 353 ~G~v~iN~~~~--~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 353 SAAVYHNASTR--FTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred eeEEEEeCCCC--cCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999999875 345578872222 2234556999999998765
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-66 Score=500.48 Aligned_cols=415 Identities=22% Similarity=0.312 Sum_probs=370.3
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++..|+++|+++|+.||. .|++++.++|.+.|.++++++++|.++|+.+.+.|.|.-..-+...-+...++.++|++
T Consensus 455 la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfa 534 (881)
T KOG2452|consen 455 LAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFA 534 (881)
T ss_pred hhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhh
Confidence 3677899999999999997 49999999999999999999999999999999999997666555556778889999999
Q ss_pred HHHHHhhcCccccCc-cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 80 SCLDKWMAPKKRRLP-LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
...++..+ ...+.. .+.....+.+.++|+||+++|.|||||+..+.|+.+.+|++- ...+++
T Consensus 535 gwcdkiqg-~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~--------------~~k~~e-- 597 (881)
T KOG2452|consen 535 GWCDKIQG-STIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ--------------VLKFAE-- 597 (881)
T ss_pred hhhhhccC-ceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH--------------Hhhhhh--
Confidence 88777533 222221 122234668899999999999999999999999999988862 112222
Q ss_pred ccccCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 PLYLDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 ~~alp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
-.|++|+++|+ .-+++.|..|| |+.|-||||+++|+.|++.|+. +.|++.+|+||++|+||+. |||+++|
T Consensus 598 ----~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifa---d~dl~ka 670 (881)
T KOG2452|consen 598 ----LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFA---DCDLNKA 670 (881)
T ss_pred ----hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEe---cCcHHHH
Confidence 25899999995 55789999998 9999999999999999998874 6799999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++....+.|+ +-|..|++..|+||.++|.|+|+.++.++++++.+|+| |.+++-||--...|..++.+|++.+.. |+
T Consensus 671 v~~~~~~vff-~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga 749 (881)
T KOG2452|consen 671 VQMGMSSVFF-SKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGA 749 (881)
T ss_pred HHhhccceee-cCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCc
Confidence 9999999999 99999999999999999999999999999999999999 999999999999999999999999875 67
Q ss_pred ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++++||.. +..|.|++|||+++++.+|.+..||-||||+.|.+|+ |+|++++.+|++++||+++|||+|.....+++
T Consensus 750 ~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~ 829 (881)
T KOG2452|consen 750 TLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVS 829 (881)
T ss_pred EEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhh
Confidence 99999976 5679999999999999999999999999999999997 58899999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+.+.+|+|+||...- .+...||||+|+||+|...|...+.+|...|+|++.
T Consensus 830 ~~l~agtvfvnty~k--tdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 830 DKLQAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred hhhccceEEEeeccc--cccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence 999999999998653 356789999999999999999999999999998763
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-65 Score=490.24 Aligned_cols=444 Identities=21% Similarity=0.286 Sum_probs=391.9
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQ-DNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
|+..++++||++|.+|++.|...|..+|.++++++|+++. +++-+|....+.-.||+..++.++-+...++.+|+.+..
T Consensus 93 A~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~y 172 (561)
T KOG2455|consen 93 ATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKY 172 (561)
T ss_pred ccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHH
Confidence 6789999999999999999999999999999999999999 788999999999999999998776577788888988888
Q ss_pred HHHhhcCccccCccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
+..+...+... ...+..+..++.|+ |-|++|+||||-....-...+|||+ ||+|++|||..+.++...+.++|+|
T Consensus 173 a~eL~~~qpi~---~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssYii~~il~E 248 (561)
T KOG2455|consen 173 ASELYAQQPIS---QTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSYIIYRILRE 248 (561)
T ss_pred HHHhhhcCCcc---ccCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHHHHHHHHHH
Confidence 88776655322 13455677788888 9999999999997666666677765 9999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc------CceeeecCCcCceEEcCCCCCCC
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL------TPVTLELGGKCPAILDTLSSPLD 231 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~------~~~~lelgG~~p~iV~~~~~daD 231 (484)
| +|+|++|+|++ +...++.+..++ ...+.||||+.+-+++.+..++++ -+++.|+||||.-+|++ +||
T Consensus 249 AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~---SA~ 325 (561)
T KOG2455|consen 249 AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHA---SAD 325 (561)
T ss_pred cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEecc---ccc
Confidence 9 99999999999 566789998887 999999999999999988776653 58899999999999999 999
Q ss_pred HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhch
Q 038617 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDP 309 (484)
Q Consensus 232 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a 309 (484)
++.++...++++|. .+||.|++.+|+||+++.++.+.+.|.+.-+++++||| |.++.+||+|+.+.+.|++++|+.+
T Consensus 326 VesvV~~TvrsAfe-y~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~a 404 (561)
T KOG2455|consen 326 VESVVSSTVRSAFE-YQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHA 404 (561)
T ss_pred hHHHHHHHHHHHHh-hcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhh
Confidence 99999999999999 99999999999999999999999999999999999997 7789999999999999999999998
Q ss_pred hc--CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhc-CCCCceEEEecCCH
Q 038617 310 LV--ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINS-RPKPLAIYAFTKDE 383 (484)
Q Consensus 310 ~~--~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~-~~~gl~a~v~t~d~ 383 (484)
.. ...+++||..+ ..|+|+.|||+...+|.++++.||+|||||+|+.|+| ++|+++++.+ ++||||.+||++|.
T Consensus 405 k~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~ 484 (561)
T KOG2455|consen 405 KKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDR 484 (561)
T ss_pred ccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccH
Confidence 74 35789999874 5799999999999999999999999999999999975 7899998854 89999999999999
Q ss_pred HHHHHHhhccc--eeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEecCcCCCCCCCCC
Q 038617 384 TFKKQIVSGTS--SGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRSFFLELEPRYPP 455 (484)
Q Consensus 384 ~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p 455 (484)
+.+.+..++++ +|+.|||+-.++......||||...||+.- -+|+.-+..|+.+++|-.. +-...+++||.
T Consensus 485 ~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikEt-~~~l~d~~yp~ 558 (561)
T KOG2455|consen 485 EVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKET-FVPLTDVKYPS 558 (561)
T ss_pred HHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhhc-ccCCcccCcCC
Confidence 99999998776 899999998888778899999999999984 4677778888877765332 22234566653
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-64 Score=465.30 Aligned_cols=432 Identities=22% Similarity=0.284 Sum_probs=390.7
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
++.+|.+.+++.|++|++.|-..|...|.++++++.+.|+...+-|-+++++|+||-..|.. +|++.-++.++|+...-
T Consensus 52 asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaegv-gevqeyvdicdyavgls 130 (507)
T KOG2453|consen 52 ASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGV-GEVQEYVDICDYAVGLS 130 (507)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhh
Confidence 57789999999999999999999999999999999999999999999999999999999886 59999999999888766
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc---
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP--- 159 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~--- 159 (484)
+.+-+ .. .+....+......|-|+|+|++|+.+|||...--|.-+.|+.+||+|++||+|.+|+++....+++.
T Consensus 131 r~l~g-~i--~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL 207 (507)
T KOG2453|consen 131 RSLEG-KI--FPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVL 207 (507)
T ss_pred hhhCC-cc--cCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHH
Confidence 55433 22 1222233445668999999999999999999999999999999999999999999987766555544
Q ss_pred -cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 -LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 -~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
+- +|++.....+|+.+.++++.+.. ++.+.||||++.++.+.+...++..+..||+||||+.||.+ |||+..++
T Consensus 208 ~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~e---dadl~lvv 284 (507)
T KOG2453|consen 208 EQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNE---DADLNLVV 284 (507)
T ss_pred hccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEec---cccceeee
Confidence 44 89999999999999999999875 99999999999999999888888889999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~ 314 (484)
...++++.. .+||+|+..+|++||+++||+.+++|++..+++++|+| |+.+-+||+-++++....+.-++++. ++++
T Consensus 285 ps~lfaavg-tagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggk 363 (507)
T KOG2453|consen 285 PSTLFAAVG-TAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGK 363 (507)
T ss_pred hHHHHHHhc-ccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCe
Confidence 999999999 99999999999999999999999999999999999999 99999999999999999999999987 4789
Q ss_pred eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh--
Q 038617 315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS-- 391 (484)
Q Consensus 315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~-- 391 (484)
+++||+. +.+|+|++|||++ ..+|.++..+|.|.||+.|.+|++++||+.+-|+.+.||++||||+|...+-++..
T Consensus 364 i~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpk 442 (507)
T KOG2453|consen 364 IEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPK 442 (507)
T ss_pred EEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCC
Confidence 9999986 5679999999998 88999999999999999999999999999999999999999999999999999976
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
.-++|.|.||-++.+ ..-.-.|||.|.+|.||+.|.++.++|+++.+.+++.
T Consensus 443 gsdcgivnvniptsg-aeiggafggek~tgggresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 443 GSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred CCccceEEecCCCCc-hhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence 457899999988765 3455679999999999999999999999998887764
|
|
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=310.84 Aligned_cols=392 Identities=19% Similarity=0.206 Sum_probs=316.2
Q ss_pred HHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcC----CChhhhhHHHHHHHHHHHHHHHHH
Q 038617 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLG----KHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 6 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G----k~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+..++|++|......++.++|.+.|.++++.|+++.++|.++..+|.- ..+.++..+.+.+.-..++..++-
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 4677888999999999999999999999999999999999999998877743 234455555666666677777666
Q ss_pred HHHhhc---C--ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 82 LDKWMA---P--KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 82 ~~~~~~---~--~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
+++... | +.........+......|+|+||+++| |....+.+....+.+|++||+||||.+..+..+...+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 665432 1 111122334556778899999999999 999999999999999999999999999999999999999
Q ss_pred Hhccc-----cCccceeeccC-ChhHHHHHHhCC--CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCC
Q 038617 157 TIPLY-----LDCKAIKVTNG-GVDVCEQLLQQK--WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSS 228 (484)
Q Consensus 157 ~l~~a-----lp~g~v~~v~g-~~~~~~~L~~~~--vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~ 228 (484)
+++++ +|.+.||+++. +++....|++.+ ||+|+..||....+.+.+.+. .|++-.+-|++.++|++
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~--- 234 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDE--- 234 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecc---
Confidence 88763 79999999998 778888888764 999999999999888887663 67777777999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhc
Q 038617 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD 308 (484)
Q Consensus 229 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~ 308 (484)
+||+|+|.+-++.+++. ..+ .|++.+.++||+.++++|+..|.+.+....+.-. . + +...+++.+
T Consensus 235 ~ADld~A~~ii~nAKtq-rPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr--~-------d----~~~~~~~~~ 299 (417)
T COG0014 235 SADLDKALKIIVNAKTQ-RPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGVELR--G-------D----AEALALLPD 299 (417)
T ss_pred cCCHHHHHHHHHcccCC-CCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEE--c-------C----HHHHHhccc
Confidence 99999999999999997 554 9999999999999999999999888873211000 0 0 011111110
Q ss_pred hhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 309 PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 309 a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
. + .+....-+..|...++++|..++++|+||+++|..+.+||-+|.|+|...+++
T Consensus 300 ~---------------~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~ 354 (417)
T COG0014 300 A---------------V----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAER 354 (417)
T ss_pred c---------------C----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHH
Confidence 0 0 11222236789999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCC--CCcchHHHHHHhhhccEEEEecC
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI--GRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
|.+++++..||||.++.+.+...+.||..-.-.+ .+-.|+-|++++|..|++.....
T Consensus 355 F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~G 413 (417)
T COG0014 355 FVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDG 413 (417)
T ss_pred HHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCc
Confidence 9999999999999999888888888887533333 34569999999999999987654
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=307.30 Aligned_cols=363 Identities=13% Similarity=0.122 Sum_probs=249.4
Q ss_pred CHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHh----cHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHH--
Q 038617 4 AMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQD----NEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKY-- 77 (484)
Q Consensus 4 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~----~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~-- 77 (484)
+.+++++.++..+...+....++.++..+.+.++++.+.. .+.+..+.+..-+|.+..+-. ..+......++.
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r~~ 81 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRREN 81 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCHHH
Confidence 3455666666666555556667777777777777776642 345555556666666643322 122222222210
Q ss_pred HHHHHHHhhc-CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 78 ALSCLDKWMA-PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
.-..+...++ ....+.. ...+...+++++|+||+++|+|||||+ +.++.+++||++||++|+|||+.+|.++..|.+
T Consensus 82 l~~~l~~el~~~~~Ld~w-~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~ 159 (422)
T cd07080 82 LERILERELGSPGILDEW-VPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR 159 (422)
T ss_pred HHHHHHHhcCCcccccCC-ccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence 0000011111 0100000 001446688999999999999999999 799999999999999999999999999999999
Q ss_pred HhccccCc----cceeec--cC-ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCc-CceEEcCCCC
Q 038617 157 TIPLYLDC----KAIKVT--NG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGK-CPAILDTLSS 228 (484)
Q Consensus 157 ~l~~alp~----g~v~~v--~g-~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~-~p~iV~~~~~ 228 (484)
+|.+++|+ +.++++ +| +.+.++.|++++ |.|+||||+++++.|++.++.+ +.++|+||| +++|+++
T Consensus 160 ~l~~~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~--- 233 (422)
T cd07080 160 SLADVDPNHPLTDSISVVYWPGGDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDR--- 233 (422)
T ss_pred HHHhcCCCCcccceEEEEEecCCchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecH---
Confidence 99999888 888888 46 445888899888 9999999999999999988754 569999999 6666666
Q ss_pred CC----CHHHHHHHHHHhhcccCCCCccccCCceEEccch---HHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHH
Q 038617 229 PL----DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKF---AATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301 (484)
Q Consensus 229 da----Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~ 301 (484)
++ |++.+++.++++++. |+||.|+|+++||||+++ +++|.++|.++++++....|.. ++ +.....+
T Consensus 234 ~a~~~~dl~~aa~~~a~~~~~-~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~-----~~-~~~~~~~ 306 (422)
T cd07080 234 EALESEKLAEVADALAEDICR-YDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL-----SL-SAAESAK 306 (422)
T ss_pred HhhccccHHHHHHHHHHHHHH-HhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC-----CC-CHHHHHH
Confidence 78 999999999999999 999999999999999999 9999999999999875433311 11 2223333
Q ss_pred HHHHhhchh-cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEec
Q 038617 302 LRKLLKDPL-VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFT 380 (484)
Q Consensus 302 ~~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 380 (484)
+...-..+. .+...... ...++ +|+....+. + .....+=.+.|.++++++|++..++. +=-|.+++.
T Consensus 307 ~~~~r~~~~~~~~~~~~~---~~~~~----~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~ 374 (422)
T cd07080 307 IARARLEAEFYELKGGVS---RDLGW----TVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAP 374 (422)
T ss_pred HHHHHHHHHHHHHhcCCC---CCCCe----EEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeec
Confidence 322211111 11111101 11122 333332222 1 11455568889999999999999986 667999999
Q ss_pred CCHHHHHHHhhccce
Q 038617 381 KDETFKKQIVSGTSS 395 (484)
Q Consensus 381 ~d~~~~~~~~~~l~~ 395 (484)
.+.+. .++++++..
T Consensus 375 ~~~~~-~~~~~~l~~ 388 (422)
T cd07080 375 SPAEL-AELADALAA 388 (422)
T ss_pred ChhhH-HHHHHHHHH
Confidence 88887 667777753
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=241.30 Aligned_cols=385 Identities=19% Similarity=0.210 Sum_probs=290.8
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------HcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQ------DLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
+++..+.||++.+..+.++.++|.++|.+++++|..+..++..+... |.| +.++....+...-..+......
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~G--L~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAG--LAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcC--ccHHHHHHhcCChHHHHHHHHH
Confidence 45667889999999999999999999999999999887777665543 455 3344333444444455555555
Q ss_pred HHHhhcCc--ccc---CccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 82 LDKWMAPK--KRR---LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 82 ~~~~~~~~--~~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
+++....+ ..+ .....++...+....|+||.++| |....-....-.+.|+++||.+++|....+..+...|.+
T Consensus 80 ~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~ 157 (433)
T KOG4165|consen 80 LRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK 157 (433)
T ss_pred HHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence 54433211 001 01112344556678899999999 888888888888899999999999999999999999999
Q ss_pred Hhcccc-----CccceeeccCChhHHHHHHhC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCC
Q 038617 157 TIPLYL-----DCKAIKVTNGGVDVCEQLLQQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSP 229 (484)
Q Consensus 157 ~l~~al-----p~g~v~~v~g~~~~~~~L~~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~d 229 (484)
+.++++ |.+.+|++.. ++....|++. . ||.|+..||+...|.|.+... .|+.....|.+.++|++ |
T Consensus 158 ~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~---d 230 (433)
T KOG4165|consen 158 LVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDK---D 230 (433)
T ss_pred HHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEecc---c
Confidence 988863 6778898874 4445556555 4 999999999999999977553 89999999999999999 9
Q ss_pred CCHHHHHHHHHHhhcccCCCCccccCCceEEccchH-HHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhc
Q 038617 230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFA-ATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD 308 (484)
Q Consensus 230 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~ 308 (484)
||+++|.+-+..++.. -.-.|++.+.+++|++.. ..|++.|...+..
T Consensus 231 ad~~kA~riv~DaK~d--YPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~------------------------------ 278 (433)
T KOG4165|consen 231 ADLDKAKRIVRDAKCD--YPAACNAMETLLIHKDLEQSPFFDDLINMLKE------------------------------ 278 (433)
T ss_pred cCHHHHHHHHhcccCC--CchhhhhHHHHhccHhhhhcchHHHHHHHHHh------------------------------
Confidence 9999999999999985 566999999999999843 4455444443331
Q ss_pred hhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 309 PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 309 a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
++.-+++|..-. .++.-.+++..-++.|+-.-.+++-.+++.++||+++|..+.+||-.|.|+|...++.
T Consensus 279 ---~gVtl~agpkl~-------~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~ 348 (433)
T KOG4165|consen 279 ---EGVTLHAGPKLA-------ALLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEH 348 (433)
T ss_pred ---cCeEEecChhHH-------hhcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHH
Confidence 222233332210 0111114455567888888899999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcc--hHHHHHHhhhccEEEEecC
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH--GHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~--g~~~~~~f~~~k~v~~~~~ 445 (484)
|.+.+++..|++|.++.+++.-.+.+|..-.-.+++.| |+.|++..+..||+.....
T Consensus 349 Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~g 407 (433)
T KOG4165|consen 349 FLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGKG 407 (433)
T ss_pred HHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecCC
Confidence 99999999999999998655445556654334445554 9999999999999887654
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-15 Score=154.45 Aligned_cols=304 Identities=16% Similarity=0.178 Sum_probs=197.3
Q ss_pred ceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCc----cceeec--cC-Ch
Q 038617 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC----KAIKVT--NG-GV 174 (484)
Q Consensus 102 ~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~----g~v~~v--~g-~~ 174 (484)
.+..+.|.|+++.|.|.|-|..-.. .++.+|.+||..|+|+|+..+.++..|.+.|.+..|. ..+.++ ++ +.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCch
Confidence 5678999999999999999987655 5778999999999999999999999999999887664 345566 34 44
Q ss_pred hHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCCcccc
Q 038617 175 DVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVG 254 (484)
Q Consensus 175 ~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a 254 (484)
+..+.+. ...|.|+.+||.++.+.+.+.. ...++.+....-.+-.+|+. +++++.+++.+..-.+. ..+|.|.|
T Consensus 160 ~~~~~~~-~~~D~vv~wGgd~ti~~ir~~~-~~~~~~i~fg~k~S~avi~~---~~~~~~~a~~~a~Di~~-~dQ~aCsS 233 (399)
T PF05893_consen 160 ELEEALS-QQADAVVAWGGDETIRAIRQPL-PPGARLIEFGPKYSFAVIDA---EAELEEAARRLANDIFL-FDQQACSS 233 (399)
T ss_pred HHHHHHH-HHCCEEEEeCCHHHHHHHHHHc-CCCCcEeeeCCceEEEEEcC---chhHHHHHHHHHHHHHH-hhCcccCC
Confidence 5555555 3479999999999999998833 33344444445558889998 88999999999999999 99999999
Q ss_pred CCceEEc---cchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH--hhchhcCCceeeCCCcCCCCCeee
Q 038617 255 VDYILVE---KKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL--LKDPLVADAIVHGGLLDKENLFIE 329 (484)
Q Consensus 255 ~~~v~V~---~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~--i~~a~~~~~~~~gg~~~~~g~~~~ 329 (484)
++.+||. ..-.++|.++|.+++.+..-.-|..... .-........... +..+..+..-+.++.. +.+
T Consensus 234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~~s---~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~-- 305 (399)
T PF05893_consen 234 PQVIFVETGDGDSVEEFAERLAEALERAAERYPRGELS---IDEAAAISSLRAEAELRYALDGEYRVWSSDD---NSW-- 305 (399)
T ss_pred CeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcCCC---HHHHHHHHHHHHHHHHHHHhcCCcceeecCC---CCE--
Confidence 9999999 3345788888877777543111110000 0011111122121 1122222322222221 112
Q ss_pred eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEEECCCccccC
Q 038617 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLIFNDTLVQQL 408 (484)
Q Consensus 330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~ 408 (484)
||+....+ ......++-.+.|.++++++|++..++....=-|.+++... +....+++.+ ..|.-.|=.
T Consensus 306 -~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv~------ 374 (399)
T PF05893_consen 306 -TVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRIVP------ 374 (399)
T ss_pred -EEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeeeCC------
Confidence 45543221 12334456688999999999999999988442477886554 4445555533 344333321
Q ss_pred CCCCCcccCCCCCC-CCcchHHHHHHhhh
Q 038617 409 CDVLPFGGVGQSGI-GRYHGHYSFETFSH 436 (484)
Q Consensus 409 ~~~~pfGG~~~SG~-G~~~g~~~~~~f~~ 436 (484)
.|-+..--. +.+-|.+.+..|++
T Consensus 375 -----~G~m~~~~~g~~hDG~~~L~~lvR 398 (399)
T PF05893_consen 375 -----LGQMLDFDPGWPHDGMYPLRRLVR 398 (399)
T ss_pred -----CCcCCCCCCCCCcCCHhHHHHHhC
Confidence 222111111 23447788887774
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.9e-14 Score=115.66 Aligned_cols=145 Identities=22% Similarity=0.261 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh--cCCceeeCCCcCCCCCeeeeEEEeCCCCCCc
Q 038617 265 AATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL--VADAIVHGGLLDKENLFIEPTILLDPPLDAE 341 (484)
Q Consensus 265 ~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~ 341 (484)
.....+.|++..+.+++.+. .+++|. .+...|+.++++.-. ++-.+..-| -.+|+|..||+|. ++|+|.
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~--ya~~~f~~~tiLs-vtP~ms 79 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPG--YAEGNFVGPTILS-VTPNMS 79 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeec--cccCCcccceEEE-ecCCcc
Confidence 35667778888888877655 556666 667788999987631 111121111 2478999999998 999999
Q ss_pred ccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCCCCCCcccCC
Q 038617 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVG 418 (484)
Q Consensus 342 i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~ 418 (484)
++.||+||||+....-++++|+|.++|+++||....|||.|.+.++.+....++|.|-+|.+.. ...+...|.|.+
T Consensus 80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip-~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP-VILKMFSFSGDR 155 (157)
T ss_pred eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc-ccccceeccccC
Confidence 9999999999999999999999999999999999999999999999999999999999998653 234445565543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.6e-10 Score=101.18 Aligned_cols=164 Identities=13% Similarity=0.138 Sum_probs=124.8
Q ss_pred CceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHH
Q 038617 219 CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYH 298 (484)
Q Consensus 219 ~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~ 298 (484)
.-+||++ |.|++.|+..++.+.- ..-...+.-.|+|||++.|+|+++++.+++.+. + .+-+...
T Consensus 6 ~lMIvfe---~GDlnsA~~~L~~sl~---~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~-----~-----~va~Hpn 69 (215)
T PF07368_consen 6 QLMIVFE---DGDLNSAMHYLLESLH---NPFAPGAVATVLVQESIREEFIERVRSRMKPLS-----P-----QVANHPN 69 (215)
T ss_pred eEEEEEe---CCCHHHHHHHHHHHHh---CcccCCcEEEEEEeHHHHHHHHHHHHHhCccCC-----h-----hhccCcH
Confidence 4489999 9999999999999984 455667888999999999999999998887542 1 1222334
Q ss_pred HHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcC--CCCceE
Q 038617 299 FERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR--PKPLAI 376 (484)
Q Consensus 299 ~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~--~~gl~a 376 (484)
+.|..+.++.. +.+++.++... .-..-.|.++.+++... +.. --.+|+++.+|++..||++++++. +++ +.
T Consensus 70 y~rsl~~i~~l--~~~~I~~~~~~-~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SV 142 (215)
T PF07368_consen 70 YLRSLKKIKCL--NAKTIVADFEN-VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SV 142 (215)
T ss_pred HHHHHHHHHhc--CCeEEEecccC-CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eE
Confidence 55666666553 66777764321 11233688998876542 222 333799999999999999999984 455 99
Q ss_pred EEecCCHHHHHHHhhccceeeEEECCCcc
Q 038617 377 YAFTKDETFKKQIVSGTSSGSLIFNDTLV 405 (484)
Q Consensus 377 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 405 (484)
+||++..+.+-+++.+++...++||+...
T Consensus 143 siW~ekla~~Yel~~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 143 SIWNEKLASAYELAARLPCDTFYINCFNV 171 (215)
T ss_pred EEeCcHHHHHHHHHHhCCCCEEEEEeccC
Confidence 99999999999999999999999998764
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.5e-06 Score=99.84 Aligned_cols=97 Identities=20% Similarity=0.143 Sum_probs=75.8
Q ss_pred cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccCChhH
Q 038617 97 FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDV 176 (484)
Q Consensus 97 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~ 176 (484)
..|+.+..+..|+|+++||+||| ...+..++.||++||+||+||++.++. .+. .+|..+.+.+ ..
T Consensus 1067 PTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~---~~~-----~Lp~~~~~~~----~~ 1131 (1208)
T PRK11905 1067 PTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA---ALA-----DLPGLVAARI----DW 1131 (1208)
T ss_pred CCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH---HHH-----hCcccccccc----cc
Confidence 35778999999999999999999 557789999999999999999998652 111 1455444433 23
Q ss_pred HHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc
Q 038617 177 CEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL 208 (484)
Q Consensus 177 ~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~ 208 (484)
+..+..++ ++.|.|||++.+.+.+.++.+++-
T Consensus 1132 ~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905 1132 TQDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred ccccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence 34666665 999999999999999998877654
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.18 Score=51.38 Aligned_cols=333 Identities=16% Similarity=0.183 Sum_probs=147.3
Q ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhh---hhHHHHH--------HHHHHHHHHHHHHHHhhcCccccC-
Q 038617 26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE---TYRDEIG--------LIKKSAKYALSCLDKWMAPKKRRL- 93 (484)
Q Consensus 26 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e---a~~~ev~--------~~~~~~~~~~~~~~~~~~~~~~~~- 93 (484)
+.++..+..+.+.+-++++.|+-....++...+-..+ -...|+. ...+.++.++.+++.+...+....
T Consensus 10 ~~~~v~~~V~~Il~dVr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~l~~~~~~Ai~~A~~~I~~fh~~q~~~~~ 89 (412)
T PF00815_consen 10 DDSEVEETVREILEDVRERGDKALLEYTKKFDGVELESLRVSEEEIAAAYAKLDPELREAIEQAAENIRAFHEAQLPKKD 89 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHTT-----
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccccEecHHHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3344445555555555666555555555554321111 0111332 234456666777777766554211
Q ss_pred -cc-ccCCCcceEEeecceEEEEEccC-chh-HHHHHhHHHHHHhhCCEEEE--eCCccc-HHHHHHHHHHhccccCccc
Q 038617 94 -PL-LFFPASGEVVSEPFGVVLICSAW-NFP-INLALEPLIGAIAAGNTVML--KPSELA-VECASFLAETIPLYLDCKA 166 (484)
Q Consensus 94 -~~-~~~~~~~~~~~~P~GVv~~i~p~-n~P-~~~~~~~i~~ALaaGN~Vvl--kps~~~-~~t~~~l~~~l~~alp~g~ 166 (484)
.. ...+.....++.|+--|++..|. .+| +++++..++||-.+|..=|+ -|.... ......|+.+ ..+ |+
T Consensus 90 ~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa-~~~---Gv 165 (412)
T PF00815_consen 90 WEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAA-HLA---GV 165 (412)
T ss_dssp EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHH-HHT---T-
T ss_pred cEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHH-HHc---CC
Confidence 11 12344567788999999999993 344 24455567899999976544 344331 1112222211 111 11
Q ss_pred eeecc-CChhHHHHHH---hC--CCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617 167 IKVTN-GGVDVCEQLL---QQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 167 v~~v~-g~~~~~~~L~---~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~ 240 (484)
=.+.. |+.....+|. +. +||+|+=.|..-+..+=....+....- .+.+..---+|-|+ ++|.+..+.+++
T Consensus 166 ~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID-~~AGPSEv~ViAD~---~A~p~~vAaDLL 241 (412)
T PF00815_consen 166 DEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID-MIAGPSEVLVIADE---TANPEFVAADLL 241 (412)
T ss_dssp SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES-------EEEEEE-T---TS-HHHHHHHHH
T ss_pred CEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC-CCCCCCceEEEECC---CCCHHHHHHHHH
Confidence 11221 3433333442 12 399999988876544322222211111 11112223455677 899999999998
Q ss_pred HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGL 320 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~ 320 (484)
.-+=. ... .+.++|..+ +++.+++.+++.+....-| .. +.++++
T Consensus 242 aQAEH-d~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~l~----------r~-------~i~~~s----------- 285 (412)
T PF00815_consen 242 AQAEH-DPD-----AQAVLVTTS--EELAEAVEAEVERQLEELP----------RR-------EIAEKS----------- 285 (412)
T ss_dssp HHHTT--TT------EEEEEES---HHHHHHHHHHHHHHHTT-T----------TH-------HHHHHH-----------
T ss_pred HHhcc-CCC-----CceEEEECC--HHHHHHHHHHHHHHHHhCC----------ch-------HHHHHH-----------
Confidence 88765 332 223455444 4555555444443210000 00 111111
Q ss_pred cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc-eeeEE
Q 038617 321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS-SGSLI 399 (484)
Q Consensus 321 ~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~g~v~ 399 (484)
+. --.++.++|++||++++|..-- =-..|.++|+. .+..+++ +|.|+
T Consensus 286 ---------------------------l~-~g~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~---~~~~~i~~AGaiF 333 (412)
T PF00815_consen 286 ---------------------------LE-NGAIIVVDSLEEAIELANEYAP-EHLELQVEDPE---ELLEKIRNAGAIF 333 (412)
T ss_dssp ---------------------------HT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEE
T ss_pred ---------------------------HH-CCeEEEECCHHHHHHHHHHhhH-HHHHHHHcCHH---HHHHHhhccChhh
Confidence 11 1134567999999999999422 25678888885 3555554 89999
Q ss_pred ECCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 400 FNDTLVQ-------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 400 iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
+...+.- ..+..+|-+ |..++.|..+...|.+.-+
T Consensus 334 lG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s 375 (412)
T PF00815_consen 334 LGEYTPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRIS 375 (412)
T ss_dssp ESTT--HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEE
T ss_pred cCCCCCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceee
Confidence 9975421 123344444 4567777788899995444
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.57 Score=47.69 Aligned_cols=329 Identities=13% Similarity=0.107 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhh---hhHHHHHH--------HHHHHHHHHHHHHHhhcCccccCccccC
Q 038617 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVE---TYRDEIGL--------IKKSAKYALSCLDKWMAPKKRRLPLLFF 98 (484)
Q Consensus 30 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e---a~~~ev~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (484)
-.+..+++.+.++++.|+=....++...+-..+ .-..|+.. ..+.++.+.++++.+...+.........
T Consensus 21 ~~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~ 100 (416)
T PRK13770 21 LYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEE 100 (416)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEecC
Confidence 334555566666666555544444444321101 00113322 2344555666666665544322222223
Q ss_pred CCcceEEeecceEEEEEccC-chh-HHHHHhHHHHHHhhCCEEEEe--CCcccHHHHHHHHHHhccccCccceeec-cCC
Q 038617 99 PASGEVVSEPFGVVLICSAW-NFP-INLALEPLIGAIAAGNTVMLK--PSELAVECASFLAETIPLYLDCKAIKVT-NGG 173 (484)
Q Consensus 99 ~~~~~~~~~P~GVv~~i~p~-n~P-~~~~~~~i~~ALaaGN~Vvlk--ps~~~~~t~~~l~~~l~~alp~g~v~~v-~g~ 173 (484)
+.....++.|+--|++..|. .+| +++.+...+||-.+|+.=|+- |++........|+.+ +.+ |+=.+. -|+
T Consensus 101 gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~~---Gv~eIy~iGG 176 (416)
T PRK13770 101 SVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAAC-YIT---QVNQVFQVGG 176 (416)
T ss_pred CcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHHHH-HHc---CCCeeeccCC
Confidence 44556788999999999995 334 345555678999999875544 443211112222211 111 111111 134
Q ss_pred hhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCC
Q 038617 174 VDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN 248 (484)
Q Consensus 174 ~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~ 248 (484)
.....+|. +. + ||.|+=.|..-+..+=....+....- .+.+..--.+|-|+ +||.+..+.+++.-+=. ..
T Consensus 177 AQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID-~~AGPSEvlViAD~---~Anp~~iAaDLLaQAEH-d~ 251 (416)
T PRK13770 177 AQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGID-QIAGPTEIALIIDE---TADLDAIVYDVFAQAEH-DE 251 (416)
T ss_pred HHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcC-CCCCCceeEEEecC---CCCHHHHHHHHHHHhcc-CC
Confidence 44444443 22 3 99999888765443211111111111 11112223455566 89999999999887754 22
Q ss_pred CCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCC
Q 038617 249 GQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENL 326 (484)
Q Consensus 249 Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~ 326 (484)
. .+.++|..+ +.++..+.+.+.+..+. . .+.++++.
T Consensus 252 ~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp-----------------r----~~i~~~al---------------- 289 (416)
T PRK13770 252 L-----ARTYVISEDAQVLKDLESRIAKALPNVD-----------------R----YDIVSKSI---------------- 289 (416)
T ss_pred C-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC-----------------h----HHHHHHHH----------------
Confidence 1 234455333 33444444444443321 0 01111110
Q ss_pred eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc-eeeEEECCCcc
Q 038617 327 FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS-SGSLIFNDTLV 405 (484)
Q Consensus 327 ~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~ 405 (484)
+-+| .++-++|+|||++++|..--= -.-|.++|... +..+++ +|.|++...+.
T Consensus 290 -------------------~~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGaiFlG~~sp 343 (416)
T PRK13770 290 -------------------ANQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQP---YIEKVKYVGALFIGHYSP 343 (416)
T ss_pred -------------------HhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH---HHhhCCEeceeccCCCCc
Confidence 1112 234579999999999995322 34588888854 445554 79999986543
Q ss_pred cc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617 406 QQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 406 ~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
-. .+..+|- +|..++.|..+...|.+.-++
T Consensus 344 ~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 344 EVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred hhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceee
Confidence 21 1223333 355677777888999955443
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.67 Score=46.90 Aligned_cols=258 Identities=19% Similarity=0.209 Sum_probs=139.8
Q ss_pred CCCcceEEeecceEEEEEccCc-hh-HHHHHhHHHHHHhhCCEEEE--eCCcc-cHHHHHHHHHHhccccCccceeec-c
Q 038617 98 FPASGEVVSEPFGVVLICSAWN-FP-INLALEPLIGAIAAGNTVML--KPSEL-AVECASFLAETIPLYLDCKAIKVT-N 171 (484)
Q Consensus 98 ~~~~~~~~~~P~GVv~~i~p~n-~P-~~~~~~~i~~ALaaGN~Vvl--kps~~-~~~t~~~l~~~l~~alp~g~v~~v-~ 171 (484)
.+.....++.|+.-|++..|.- +| +++.+...+||-.+|+.=|+ -|... .......|+.+ +.+ |+=.+. -
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~~---Gv~eIy~v 153 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAA-KLA---GVDEVYKV 153 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHH-HHc---CCCeehhc
Confidence 3445677889999999999973 23 34455567899999986554 34421 11222222221 111 111122 1
Q ss_pred CChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CCc--CceEEcCCCCCCCHHHHHHHHHHhh
Q 038617 172 GGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGK--CPAILDTLSSPLDIKVTVKRIIGGK 243 (484)
Q Consensus 172 g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~--~p~iV~~~~~daDl~~aa~~i~~~~ 243 (484)
|+.....+|. +. | ||.|+=.|..-+..+=....+ .+-..+ .|. -.+|-|+ +||.+.++.+++.-+
T Consensus 154 GGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~---~Anp~~iAaDLLaQA 226 (393)
T TIGR00069 154 GGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG----DVGIDMPAGPSEVLVIADE---TANPEFVAADLLSQA 226 (393)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceEEEEeCC---CCCHHHHHHHHHHHh
Confidence 3444444443 22 4 999998887655432111111 111121 133 3355566 899999999998887
Q ss_pred cccCCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617 244 FASCNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321 (484)
Q Consensus 244 ~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~ 321 (484)
=. ... .+.++|..+ +.++..+.+.+.+..+. . .+..+++.
T Consensus 227 EH-d~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~-----------------r----~~i~~~al----------- 268 (393)
T TIGR00069 227 EH-DPD-----AQAILVTTSEELAEAVQEEIERQLATLP-----------------R----REIARKSL----------- 268 (393)
T ss_pred cc-CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC-----------------h----HHHHHHHH-----------
Confidence 54 221 334555333 34444444444444321 0 01111111
Q ss_pred CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEEE
Q 038617 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLIF 400 (484)
Q Consensus 322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~i 400 (484)
+-+| .++.++|++||++++|..--= -.-|.++|... +..++ .+|.|++
T Consensus 269 ------------------------~~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~~---~l~~I~nAGaiFl 317 (393)
T TIGR00069 269 ------------------------EDNG---AIILVDDLEEAIEISNDYAPE-HLELQTKNPEE---LLPKIRNAGSIFL 317 (393)
T ss_pred ------------------------HhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH---HHhhcCccceecc
Confidence 0012 234579999999999995222 34577888754 44444 4899999
Q ss_pred CCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617 401 NDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 401 N~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
...+.-. .+..+|- +|..++.+..+...|.++-++
T Consensus 318 G~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 318 GPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred CCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 8754321 1222333 456677788889999955443
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.83 Score=46.74 Aligned_cols=325 Identities=15% Similarity=0.217 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHcCCC----hhhhhHHHHHH--------HHHHHHHHHHHHHHhhcCccccC--cc
Q 038617 30 RKNQLRALIELLQDNEDKIFKALHQDLGKH----PVETYRDEIGL--------IKKSAKYALSCLDKWMAPKKRRL--PL 95 (484)
Q Consensus 30 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~ea~~~ev~~--------~~~~~~~~~~~~~~~~~~~~~~~--~~ 95 (484)
-.+..+.+.+.++++.|+=....++...+- +.-+ ..|+.. ..+.++.++++++.+...+.... ..
T Consensus 22 ~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~Vs-~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 100 (426)
T PRK12447 22 VRETVEAILADIEARGDAAVREYSRKFDKWSPGSFRLS-AAEIDAAVAKVPEQVKEDIRFAQDQVRRFAEAQRDSLQDLE 100 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccccccC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCceE
Confidence 344555555666666555444444443321 1111 113332 23445556666666655443211 11
Q ss_pred --ccCCCcceEEeecceEEEEEccC-chh-HHHHHhHHHHHHhhCCEEEE--eCCcccHHHHHHHHHHhccccCccceee
Q 038617 96 --LFFPASGEVVSEPFGVVLICSAW-NFP-INLALEPLIGAIAAGNTVML--KPSELAVECASFLAETIPLYLDCKAIKV 169 (484)
Q Consensus 96 --~~~~~~~~~~~~P~GVv~~i~p~-n~P-~~~~~~~i~~ALaaGN~Vvl--kps~~~~~t~~~l~~~l~~alp~g~v~~ 169 (484)
...+.....++.|+--|++..|. .+| +++.+...+||-.+|+.=|+ -|+.........|+.+ +.+ |+=.+
T Consensus 101 ~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~~---Gv~eI 176 (426)
T PRK12447 101 VETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVAAM-HLA---GADEI 176 (426)
T ss_pred EecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HHc---CCCee
Confidence 12344556788999999999995 334 34555577899999986554 3443211222222221 111 11112
Q ss_pred c-cCChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CCc--CceEEcCCCCCCCHHHHHHHHH
Q 038617 170 T-NGGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGK--CPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 170 v-~g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~--~p~iV~~~~~daDl~~aa~~i~ 240 (484)
. -|+.....+|. +. | ||.|+=.|..-+..+=....+ .+-..+ .|. --+|-|+ +||.+..+.+++
T Consensus 177 y~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~---~Anp~~vAaDLL 249 (426)
T PRK12447 177 YVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADD---TADPELVATDLL 249 (426)
T ss_pred hhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCC---CCCHHHHHHHHH
Confidence 2 13444444443 22 4 999998887765432111111 111111 133 3345566 899999999998
Q ss_pred HhhcccCCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHG 318 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~g 318 (484)
.-+=. ... .+.++|..+ +.++..+.+.+.+..+. . .+.++++.
T Consensus 250 aQAEH-d~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~-----------------r----~~i~~~sl-------- 294 (426)
T PRK12447 250 GQAEH-GPN-----SPAVLITTSRKLAEEVLAEIERLLAILP-----------------T----ADVASAAW-------- 294 (426)
T ss_pred HHhcc-CCC-----CceEEEECCHHHHHHHHHHHHHHHHhCC-----------------H----HHHHHHHH--------
Confidence 87754 222 234555433 33444444444333221 0 01111110
Q ss_pred CCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceee
Q 038617 319 GLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGS 397 (484)
Q Consensus 319 g~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~ 397 (484)
+-+| .|+-++|++||++++|..--= -.-|.++|... +..++ .+|.
T Consensus 295 ---------------------------~~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~~---~l~~i~nAGa 340 (426)
T PRK12447 295 ---------------------------RDYG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPDW---FLENMTNYGA 340 (426)
T ss_pred ---------------------------HhCC---EEEEECCHHHHHHHHHhhChH-heeehhCCHHH---HHhhcCccce
Confidence 0122 234579999999999995222 34588888853 44544 4899
Q ss_pred EEECCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617 398 LIFNDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 398 v~iN~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
|++...+.-. .+..+|- +|..++.|..+...|.+.-++
T Consensus 341 iFlG~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 341 LFLGERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred eccCCCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence 9997654311 1122333 456777788889999955443
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.048 Score=63.66 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=74.8
Q ss_pred cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccCChhH
Q 038617 97 FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDV 176 (484)
Q Consensus 97 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~ 176 (484)
..|+++..+..|+|+|+++++-.- ..+..++.+|++||.||+..++. ....+ ..+|+.+.+.+.- ..
T Consensus 1176 PTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~-----~~Lp~~v~~~v~~--~~ 1242 (1318)
T PRK11809 1176 PTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL---HRALV-----AALPAAVQARIQL--AK 1242 (1318)
T ss_pred CCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch---hHHHH-----HhccHHHHhHhhh--cc
Confidence 357789999999999999987433 57788999999999998875543 22222 3388888776522 11
Q ss_pred HHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCcee
Q 038617 177 CEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVT 212 (484)
Q Consensus 177 ~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~ 212 (484)
...+...+++.|.|-|.....+.+.++.+++-.+++
T Consensus 1243 ~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1243 DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 222223458999999999999999988887765555
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=95.82 E-value=2.5 Score=42.91 Aligned_cols=261 Identities=18% Similarity=0.162 Sum_probs=138.2
Q ss_pred CCCcceEEeecceEEEEEccCc-hh-HHHHHhHHHHHHhhCCEEEE--eCCccc-HHHHHHHHHHhccccCccceeec-c
Q 038617 98 FPASGEVVSEPFGVVLICSAWN-FP-INLALEPLIGAIAAGNTVML--KPSELA-VECASFLAETIPLYLDCKAIKVT-N 171 (484)
Q Consensus 98 ~~~~~~~~~~P~GVv~~i~p~n-~P-~~~~~~~i~~ALaaGN~Vvl--kps~~~-~~t~~~l~~~l~~alp~g~v~~v-~ 171 (484)
.+.....++.|+--|++..|.- +| +++.+...+||-.+|+.=|+ -|.... ......|+.+ +.+ |+=.+. -
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa-~~~---Gv~eiy~v 157 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAA-KLA---GVDEIYKV 157 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHH-HHc---CCcEEecc
Confidence 3556678899999999999965 44 34555567899999986544 344321 1111222211 111 111122 1
Q ss_pred CChhHHHHHH---h-CC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhccc
Q 038617 172 GGVDVCEQLL---Q-QK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFAS 246 (484)
Q Consensus 172 g~~~~~~~L~---~-~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~ 246 (484)
|+.....+|. + -+ ||.|+=.|..-+..+=....... .-=.+.+..--.+|.|+ +||.+..+.+++.-+=.
T Consensus 158 GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V-~ID~~AGPSEvlIiAD~---~A~p~~vAaDLLaQAEH- 232 (390)
T cd06572 158 GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDV-GIDMPAGPSEVLVIADE---TANPEFVAADLLSQAEH- 232 (390)
T ss_pred CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCc-CccCCCCCceEEEEeCC---CCCHHHHHHHHHhhhcc-
Confidence 3444444443 1 24 99999888665443211111110 00111112223355566 89999999998887754
Q ss_pred CCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCC
Q 038617 247 CNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKE 324 (484)
Q Consensus 247 ~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~ 324 (484)
.. . .+.++|..+ +.++..+.+.+.+..+. .. +.++++.
T Consensus 233 ~~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~-----------------r~----~~~~~~~-------------- 272 (390)
T cd06572 233 DP----D-SQAILVTTSEELAEAVEEEVERQLAELP-----------------RR----EIAAKSL-------------- 272 (390)
T ss_pred CC----C-CeEEEEECCHHHHHHHHHHHHHHHHhCC-----------------cH----HHHHHHH--------------
Confidence 21 1 234555444 23344443433333221 00 0111100
Q ss_pred CCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEEECCC
Q 038617 325 NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLIFNDT 403 (484)
Q Consensus 325 g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~ 403 (484)
+-+| .++.++|++|+++++|..-- --.-|.++|... +..++ .+|.|++..+
T Consensus 273 ---------------------~~~g---~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGsiFlG~~ 324 (390)
T cd06572 273 ---------------------LDYG---AIILVDDLEEAIELANEYAP-EHLELQTEDPEE---LLEKIRNAGSIFLGPY 324 (390)
T ss_pred ---------------------HhCC---EEEEECCHHHHHHHHHhhch-hhheeHhcCHHH---HHhhCccceEEeecCC
Confidence 0111 34457999999999998522 245678888864 44444 4899999875
Q ss_pred cccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617 404 LVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 404 ~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
+.-. .+..+|.+ |..++.|..+...|.++-++
T Consensus 325 tp~a~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 325 TPEALGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred CchhhhccccCCCCccCCC-----cceeecCCCCHHHheeccee
Confidence 4321 12234444 45677777888999955443
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.30 E-value=3.9 Score=41.65 Aligned_cols=286 Identities=17% Similarity=0.192 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHhhcCccccC--ccccCCCcceEEeecceEEEEEcc---CchhHHHHHhHHHHHHhhCCEEEE--eCCc
Q 038617 73 KSAKYALSCLDKWMAPKKRRL--PLLFFPASGEVVSEPFGVVLICSA---WNFPINLALEPLIGAIAAGNTVML--KPSE 145 (484)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~i~~ALaaGN~Vvl--kps~ 145 (484)
+.++.++++++.+...+.... .....+.....++.|+--|++..| .-||-..+| ..+||-.+|+.=|+ -|.+
T Consensus 79 eai~~A~~~I~~fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~ 157 (425)
T COG0141 79 EALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPP 157 (425)
T ss_pred HHHHHHHHHHHHHHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCC
Confidence 455566677777766554321 112234566788999999999999 556655555 56799999986443 3544
Q ss_pred c---cHHHHHHHHHHhccccCccceeeccCChhHHHHHHh---C--CCCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 038617 146 L---AVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQ---Q--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGG 217 (484)
Q Consensus 146 ~---~~~t~~~l~~~l~~alp~g~v~~v~g~~~~~~~L~~---~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 217 (484)
. +|.+ ..-++++- +. .+++ -|+.....+|.= . +||+|+=.|+.-+..+=.... ...-+=+..|-
T Consensus 158 ~~gv~p~i-L~AA~~~G--v~-eIy~--vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~--g~V~ID~~AGP 229 (425)
T COG0141 158 KDGVNPEI-LAAARLAG--VD-EVYK--VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVS--GVVGIDMIAGP 229 (425)
T ss_pred CCCCCHHH-HHHHHHhC--cH-HHHH--ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhh--CCcccCCCCCC
Confidence 3 2321 11111110 11 1111 134444444431 1 499999888775433211111 11111122222
Q ss_pred c-CceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCH
Q 038617 218 K-CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINE 296 (484)
Q Consensus 218 ~-~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~ 296 (484)
- --+|-|+ ++|.+..+.+++.-+=. +. . .+.++|..+ ++|.+++.+++.+..-.
T Consensus 230 SEvlViAD~---ta~p~~vA~DLLsQAEH-d~----~-a~aiLvT~s--~~la~~v~~~v~~~l~~-------------- 284 (425)
T COG0141 230 SEVLVIADE---TANPDFVAADLLSQAEH-DP----D-AQAILVTDS--EELAEAVEAAVERQLET-------------- 284 (425)
T ss_pred ceEEEEeCC---CCCHHHHHHHHHHHhhc-CC----C-ceEEEEeCc--HHHHHHHHHHHHHHHHh--------------
Confidence 2 2344455 79999999998887754 22 2 234555444 45555555544431100
Q ss_pred HHHHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceE
Q 038617 297 YHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI 376 (484)
Q Consensus 297 ~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 376 (484)
..+ .+.+.++. +-|| .|+-++|++|+++++|..-- --.
T Consensus 285 --l~~-~ei~~~~l-----------------------------------~~~g---~iilv~~l~ea~~~~N~~AP-EHL 322 (425)
T COG0141 285 --LPR-AEIARKAL-----------------------------------ENYG---AIILVDDLDEAVEISNEYAP-EHL 322 (425)
T ss_pred --ccH-HHHHHHHH-----------------------------------HhCC---eEEEECCHHHHHHHHHhhCh-Hhh
Confidence 000 11111110 0111 34567999999999998522 345
Q ss_pred EEecCCHHHHHHHhhcc-ceeeEEECCCccccCCCCCCcccC----CCCCCCCcchHHHHHHhhhccE
Q 038617 377 YAFTKDETFKKQIVSGT-SSGSLIFNDTLVQQLCDVLPFGGV----GQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 377 ~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~~~~~pfGG~----~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
-|.++|+.. +..++ ++|.|+++..+.-...++ ..|. ..+|+-+..+..+...|..+-+
T Consensus 323 ei~~~~p~~---~l~~I~nAGsIFlG~~sPe~~GDY--~aG~NHVLPT~g~AR~~s~L~v~dF~K~~t 385 (425)
T COG0141 323 ELQTENPRE---LLGKIRNAGSIFLGHYSPESLGDY--AAGPNHVLPTSGTARFSSGLSVYDFLKRST 385 (425)
T ss_pred hhhhcCHHH---HHHHhcccceeeecCCCCcccccc--ccCCCccCCCCccchhcCCccHHHhhhHHH
Confidence 688888864 44444 479999998543111111 1222 1245566777788888885443
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.73 E-value=5.9 Score=40.73 Aligned_cols=334 Identities=17% Similarity=0.166 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhh---hhHHHHHH--------HHHHHHHHHHHHHHhhcCccccCcc
Q 038617 27 VAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE---TYRDEIGL--------IKKSAKYALSCLDKWMAPKKRRLPL 95 (484)
Q Consensus 27 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e---a~~~ev~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (484)
..+-.+..+.+.+.++++.|+=....++..-+...+ ....|+.. ..+.++.++++++.+...+......
T Consensus 26 ~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~~I~~Fh~~q~~~~~~ 105 (425)
T PRK00877 26 DEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSEEEIEAAYERLDPELREALEEAAENIRAFHEAQKPESWD 105 (425)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 344455566666666666665555455544332100 00123332 2344556666666665544332111
Q ss_pred --ccCCCcceEEeecceEEEEEccCc---hhHHHHHhHHHHHHhhCCEEEE--eCCcccHHHHHHHHHHhccccCcccee
Q 038617 96 --LFFPASGEVVSEPFGVVLICSAWN---FPINLALEPLIGAIAAGNTVML--KPSELAVECASFLAETIPLYLDCKAIK 168 (484)
Q Consensus 96 --~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~i~~ALaaGN~Vvl--kps~~~~~t~~~l~~~l~~alp~g~v~ 168 (484)
...+.....++.|+--|++..|.- || ++.+...+||-.+|..=|+ -|..........|+.+ +.+ |+=.
T Consensus 106 ~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~AA-~~~---Gv~e 180 (425)
T PRK00877 106 VETAPGVRLGQRWRPIERVGLYVPGGKAAYP-SSVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILAAA-ALA---GVDE 180 (425)
T ss_pred EEecCCeEEEEEEEehHHeEEEccCCCCCch-HHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HHc---CCCe
Confidence 123445567889999999999963 44 4455567899999986544 3443111222222211 111 1111
Q ss_pred ec-cCChhHHHHHH---hC--CCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617 169 VT-NGGVDVCEQLL---QQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242 (484)
Q Consensus 169 ~v-~g~~~~~~~L~---~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~ 242 (484)
+. -|+.....+|. +. +||.|+=.|..-+..+=....+.... =.+.+..---+|-|+ +||.+..+.+++.-
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~I-D~~AGPSEvlViAD~---~Anp~~vAaDLLaQ 256 (425)
T PRK00877 181 VYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGI-DMIAGPSEILVIADE---TADPDFVAADLLSQ 256 (425)
T ss_pred eeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCc-CCCCCCceeEEEeCC---CCCHHHHHHHHHHH
Confidence 11 13444444443 22 39999988876543321111111011 111111222344456 79999999999888
Q ss_pred hcccCCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCC
Q 038617 243 KFASCNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGL 320 (484)
Q Consensus 243 ~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~ 320 (484)
+=. ... .+.++|..+ +.++..+.+.+++..+. | .+.++++.
T Consensus 257 AEH-d~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~--------------------r-~~ia~~sl---------- 299 (425)
T PRK00877 257 AEH-DPD-----AQSILVTTSEELAEAVAAEVERQLATLP--------------------R-AEIARASL---------- 299 (425)
T ss_pred hcc-CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC--------------------h-HHHHHHHH----------
Confidence 754 222 234555444 33444444433333221 0 01111110
Q ss_pred cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEE
Q 038617 321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLI 399 (484)
Q Consensus 321 ~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~ 399 (484)
+-+| .|+.++|+|||++++|..-- --.-|.++|+.. +..++ .+|.|+
T Consensus 300 -------------------------~~~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~~---~l~~I~nAGaiF 347 (425)
T PRK00877 300 -------------------------EGQG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPRA---LLDRIRNAGAIF 347 (425)
T ss_pred -------------------------HhCC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHHH---HHhhcCccceec
Confidence 0122 23457999999999999522 234588888854 34444 589999
Q ss_pred ECCCccccCCCCCCcccC----CCCCCCCcchHHHHHHhhhccEE
Q 038617 400 FNDTLVQQLCDVLPFGGV----GQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 400 iN~~~~~~~~~~~pfGG~----~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
+...+.-...++ +.|. ..+|..++.|..+...|.++-++
T Consensus 348 lG~~tp~a~GDY--~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 348 LGPYTPESLGDY--AAGPNHVLPTSGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred cCCCCchhhhhc--ccCCCcccCCCcceeecCCccHHHhccceeE
Confidence 987543211111 1222 23456778888889999955443
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=5.4 Score=40.13 Aligned_cols=247 Identities=14% Similarity=0.109 Sum_probs=132.3
Q ss_pred CCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeec-cCChhH
Q 038617 98 FPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVT-NGGVDV 176 (484)
Q Consensus 98 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v-~g~~~~ 176 (484)
.+.....++.|+-.|++..|.-|| ++.+...+||-.+|+.=|+--+|-.......|+.+ +.+ |+=.+. -|+...
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~aa-~~~---Gv~eIy~vGGAQA 157 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLAVA-KEL---GVKGVLAIGGPHG 157 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHHHH-HHc---CCCeeecccCHHH
Confidence 344566788999999999996555 55555788999999875544332111222222211 111 111111 134333
Q ss_pred HHHHHhC-CCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccC
Q 038617 177 CEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGV 255 (484)
Q Consensus 177 ~~~L~~~-~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~ 255 (484)
..++.-. +||+|+=.|..-+..+=....+. .-+=+--|----+||-+ ++|.+.++.+++.-+=. .. . .
T Consensus 158 IAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~--V~ID~~AGPSEvlViAD---~a~p~~vAaDLLaQAEH-~~----~-a 226 (368)
T PRK13769 158 LAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY--VGIDGIEGPTELVVYAE---GVPPEVAVRGALAQLEH-GP----T-S 226 (368)
T ss_pred HHHHhcCCCcCEEECCCcHHHHHHHHHHhCC--cCCCCcCCCcceEEEcC---CCCHHHHHHHHHHHhhc-CC----C-C
Confidence 3344322 69999988876554321111111 11111123334456666 78888888888777643 21 1 3
Q ss_pred CceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeC
Q 038617 256 DYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLD 335 (484)
Q Consensus 256 ~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~ 335 (484)
+.++|..+ +++.+++.+++.+ ++.+. . |.
T Consensus 227 ~~iLvT~s--~~la~~V~~~v~~--------------------------~~~~~-------~-------~~--------- 255 (368)
T PRK13769 227 FAYLLSTD--AELLKAAEEIYRR--------------------------ERTSS-------M-------GP--------- 255 (368)
T ss_pred cEEEEECC--HHHHHHHHHHHHH--------------------------HHHhc-------C-------CC---------
Confidence 34555555 4555555554432 01000 0 00
Q ss_pred CCCCCcccccceecceeeeeeeCCHHHHHHHHhcC-CCCceEEEecCCHHHHHHHhhcc-ceeeEEECCCccc-----cC
Q 038617 336 PPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR-PKPLAIYAFTKDETFKKQIVSGT-SSGSLIFNDTLVQ-----QL 408 (484)
Q Consensus 336 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~-----~~ 408 (484)
..|+.++|++||++++|.. +-.|.. .+. .. +..++ .+|.|+++.+... ..
T Consensus 256 ----------------~~iivv~~leeai~~~N~~APEHLel--~~~-~~----~~~~i~nAGsiFl~~p~a~GDY~aGp 312 (368)
T PRK13769 256 ----------------LEVRKVAGVEEAVRFIDEIAPEHLEV--WGR-RE----VAYRVRNVGAVSVNMPSPYLDYVAGI 312 (368)
T ss_pred ----------------CeEEEECCHHHHHHHHHhhChHheEe--eCc-HH----HHhhCCccCChhcCCchhhhccccCC
Confidence 2456789999999999994 223433 332 22 33344 4899999653211 01
Q ss_pred CCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 409 CDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 409 ~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
+..+|- +|..++.|..+...|.++-+
T Consensus 313 NHvLPT-----~G~AR~~sgLsv~~FlK~~t 338 (368)
T PRK13769 313 SHVLPT-----GGTARWRGIITPLTFMKPIG 338 (368)
T ss_pred CCcCCC-----CcceeccCCCcHHHccccee
Confidence 222333 35667777788899985443
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=92.77 E-value=13 Score=38.24 Aligned_cols=286 Identities=17% Similarity=0.194 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHHhhcCccccCc--c-ccCCCcceEEeecceEEEEEccCc-hh-HHHHHhHHHHHHhhCCEEEE--eCCc
Q 038617 73 KSAKYALSCLDKWMAPKKRRLP--L-LFFPASGEVVSEPFGVVLICSAWN-FP-INLALEPLIGAIAAGNTVML--KPSE 145 (484)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~P~GVv~~i~p~n-~P-~~~~~~~i~~ALaaGN~Vvl--kps~ 145 (484)
+.++.+.++++.+...+..... . ...+.....++.|+.-|++..|.- +| +++++..++||-.+|..=|+ -|+.
T Consensus 82 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~ 161 (431)
T PLN02926 82 EAFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPR 161 (431)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCC
Confidence 3445555666665554432211 1 123445567889999999999973 23 34455567899999986443 4543
Q ss_pred c-cHHHHHHHHHHhccccCccceeec-cCChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CC
Q 038617 146 L-AVECASFLAETIPLYLDCKAIKVT-NGGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GG 217 (484)
Q Consensus 146 ~-~~~t~~~l~~~l~~alp~g~v~~v-~g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG 217 (484)
. .......|+.+ +.+ |+=.+. -|+.....+|. +. | ||.|+=.|..-+..+=....+. ..-+-..+ .|
T Consensus 162 ~~g~i~p~iL~AA-~~~---Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~-~~~VgID~~AG 236 (431)
T PLN02926 162 KDGSICPEVLYCA-KKA---GVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNS-EAMVSIDMPAG 236 (431)
T ss_pred cCCCCCHHHHHHH-HHc---CCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCC-CCccccCCCCC
Confidence 2 11222222221 111 111121 13444444443 22 4 9999988877554321111111 00011111 13
Q ss_pred c--CceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccC
Q 038617 218 K--CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIIN 295 (484)
Q Consensus 218 ~--~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~ 295 (484)
. --+|-|+ +||.+.++.+++.-+=. ... .+.++|..+ .++.+++.+++.+..-.-|
T Consensus 237 PSEvlIiAD~---tA~p~~vAaDLLaQAEH-dp~-----a~aiLvT~s--~~la~~V~~~v~~ql~~l~----------- 294 (431)
T PLN02926 237 PSEVLVIADK---TANPVHVAADLLSQAEH-GPD-----SQVVLVAVG--DVDLDAIEEEVEKQCQSLP----------- 294 (431)
T ss_pred CceeEEEeCC---CCCHHHHHHHHHHHhcc-CCC-----CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------
Confidence 3 3345566 79999999999887754 222 334555444 3444444443332100000
Q ss_pred HHHHHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCce
Q 038617 296 EYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA 375 (484)
Q Consensus 296 ~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 375 (484)
| .+..+ +.+.. -.|+.++|++||++++|..-- --
T Consensus 295 -----r-~~i~~--------------------------------------~sl~~-g~iivv~~l~ea~~~~N~~AP-EH 328 (431)
T PLN02926 295 -----R-GEIAS--------------------------------------KALGH-SFIVVARDMAEAISFSNLYAP-EH 328 (431)
T ss_pred -----h-HHHHH--------------------------------------HHHHC-CEEEEECCHHHHHHHHHhhCh-Hh
Confidence 0 01111 11111 234568999999999999522 23
Q ss_pred EEEecCCHHHHHHHhhcc-ceeeEEECCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 376 IYAFTKDETFKKQIVSGT-SSGSLIFNDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 376 a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
.-|.++|... +..++ .+|.|++...+.-. .+..+|- +|..++.|..+...|.++-+
T Consensus 329 Lei~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s 392 (431)
T PLN02926 329 LIVNVEDAES---WLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMT 392 (431)
T ss_pred heehhcCHHH---HHhhcCccceeccCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceee
Confidence 4588888854 44444 48999997654211 1122333 35667788888999995444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 484 | ||||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-103 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-102 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-76 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-75 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-39 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-37 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 7e-33 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-32 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 2e-32 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-32 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-31 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-31 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-31 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 9e-31 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-30 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 5e-30 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-29 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-29 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 4e-29 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 9e-29 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-28 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-28 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-28 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-28 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 3e-28 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-28 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 7e-28 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-27 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 3e-26 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-26 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 6e-26 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 6e-26 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 8e-26 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 9e-26 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-25 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-25 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-25 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 2e-25 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 3e-25 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 3e-25 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 3e-25 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-25 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-25 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 6e-25 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-25 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 7e-25 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-24 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-24 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 2e-24 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-24 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-24 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-24 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 3e-24 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 5e-24 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-24 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-23 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 1e-23 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 3e-23 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-22 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-22 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-22 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-22 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 1e-21 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-21 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 4e-21 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-20 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 2e-20 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 3e-20 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 7e-20 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 8e-20 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 3e-19 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 4e-19 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 5e-19 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 9e-19 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-18 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-16 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-16 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-12 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-12 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 6e-12 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 4e-11 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-07 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-07 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-07 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 8e-06 |
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 700 bits (1810), Expect = 0.0
Identities = 192/464 (41%), Positives = 277/464 (59%), Gaps = 10/464 (2%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV 61
+ M +I + + R F SG T+ + +R QL AL L+Q+ E ++ AL DL K+
Sbjct: 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEW 73
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFP 121
Y +E+ + + +Y + L +W A + + SEP GVVL+ WN+P
Sbjct: 74 NAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYP 133
Query: 122 INLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLL 181
NL ++P++GAIAAGN V+LKPSEL+ AS LA IP YLD V NGGV +LL
Sbjct: 134 FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELL 193
Query: 182 QQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241
+++++ I +TGS VG I+M+AAAKHLTPVTLELGGK P +D D+ V +RI
Sbjct: 194 KERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVD---KNCDLDVACRRIAW 250
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301
GKF +GQ CV DYIL + ++E LK ++K+FYGE+ K S+ RII+ HF+R
Sbjct: 251 GKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQR 309
Query: 302 LRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ 361
+ L++ + +GG D +I PTIL D + +M EEIFGP+LPI+ + +++
Sbjct: 310 VMGLIEG----QKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLE 365
Query: 362 ESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
E+I+FIN R KPLA+Y F+ ++ K++++ TSSG + ND +V LPFGGVG SG
Sbjct: 366 EAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSG 425
Query: 422 IGRYHGHYSFETFSHEKAIMQRSFFLE--LEPRYPPWNDFKMKF 463
+G YHG SFETFSH ++ + R + L+ RYPP +
Sbjct: 426 MGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQH 469
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 593 bits (1530), Expect = 0.0
Identities = 158/438 (36%), Positives = 239/438 (54%), Gaps = 11/438 (2%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
+I+ + + F + T V +RK L L E + +N++ ++ AL +DLGK
Sbjct: 29 KIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLA 88
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
EIG + +AL+ LD+W+AP P + P+ VV EP+GV I +N+P+NL L
Sbjct: 89 EIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTL 148
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWN 186
PLIGAI GNT ++KPSE E ++ + + I + + V GG D LL ++
Sbjct: 149 TPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFD 208
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFAS 246
IFFTGSP VG +VM AAAKHLTPV LELGGKCP I+ D+ TV +++ GKF
Sbjct: 209 FIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVL---PDADLDQTVNQLMFGKFI- 264
Query: 247 CNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLL 306
+GQ + DY+ V L+E L +K E S +++ E +RL LL
Sbjct: 265 NSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN----STGKLVTERQVQRLVSLL 320
Query: 307 KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
+ ++ G D + T++ + +M+EE+FGPILP++ ++++ +I+
Sbjct: 321 EAT--QGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQ 378
Query: 367 INS-RPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY 425
+N PKPLA+Y F KD K I++ SG N ++ LPFGG+G SG+G Y
Sbjct: 379 VNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEY 438
Query: 426 HGHYSFETFSHEKAIMQR 443
HGH+S+ TF+H+K++
Sbjct: 439 HGHFSYLTFTHKKSVRIV 456
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 227 bits (580), Expect = 5e-69
Identities = 115/440 (26%), Positives = 189/440 (42%), Gaps = 51/440 (11%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
AWR L + ++L +++KI L +++ K ++ E+
Sbjct: 55 AWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAK-GYKSAVSEVV-------RTAE 106
Query: 81 CLDKWMAPKKRRL-----PLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLI 130
+ + A + R+ F A+ + V EP G+VL S +N+P+NLA +
Sbjct: 107 II-NYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIA 165
Query: 131 GAIAAGNTVMLKPSELAVECASFLAET-----IPL-YLDCKAIKVTNGGVDVCEQLLQQK 184
A+ AGN + KP LAE +P + +T G ++ + +++ +
Sbjct: 166 PALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNT----ITGRGSEIGDYIVEHQ 221
Query: 185 W-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIG 241
N I FTGS +G + A + P+ LELGGK AI+ D D+++T K II
Sbjct: 222 AVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDA-----DLELTAKNIIA 274
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301
G F GQ C V +LV + A L+E ++ + NP+D I+ +I+ +
Sbjct: 275 GAFGYS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADY 333
Query: 302 LRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
+ L+ D A + +E I P + D + EE FGP+LPII + ++
Sbjct: 334 VEGLINDANDKGATALTEI--KREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
+E+IE N L FT D I G++ N+ + D PF G +S
Sbjct: 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKS 450
Query: 421 GIGRYHGHYSFETFSHEKAI 440
G G YS E + K++
Sbjct: 451 GAGIQGVKYSIEAMTTVKSV 470
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 4e-67
Identities = 114/440 (25%), Positives = 189/440 (42%), Gaps = 51/440 (11%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
W+ + L A +LL++ ++ I + + ++ K P ++ E+
Sbjct: 64 IWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAK-PKKSAIGEVS-------RTAD 115
Query: 81 CLDKWMAPKKRRL-----PLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLI 130
+ + A + RL F V EP GVVL S +N+P+NLA +
Sbjct: 116 II-RHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIA 174
Query: 131 GAIAAGNTVMLKPSELAVECASFLAET-----IPL-YLDCKAIKVTNGGVDVCEQLLQQK 184
A+ GNTV+ KP+ + E P + VT G + + L++
Sbjct: 175 PALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQV----VTGRGSVIGDHLVEHP 230
Query: 185 W-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIG 241
+ I FTG G + A + PV LELGGK PAI+ D D+K+T +I+
Sbjct: 231 GIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDA-----DLKLTASQIVS 283
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301
G F+ GQ C + + V+ A L+ ++K +++ +P+D I+ +I+E
Sbjct: 284 GAFSYS-GQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAF 342
Query: 302 LRKLLKDPLVADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
++ L+ D L A ++ G ++ + PT+L D + EE FGP+LPII + +
Sbjct: 343 IQGLIDDALENGATLLSGN--KRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
E+I N L FTKD I G++ N + D PF GV +S
Sbjct: 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGP-DHFPFLGVKKS 459
Query: 421 GIGRYHGHYSFETFSHEKAI 440
G+G S + + E+
Sbjct: 460 GLGVQGIKPSLLSMTRERVT 479
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 2e-62
Identities = 104/449 (23%), Positives = 180/449 (40%), Gaps = 55/449 (12%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R + ELL+++ ++I + L ++ G EI A + K A
Sbjct: 74 RSAIIYRAAELLEEHREEIVEWLIKESGS-TRSKANLEIT-------LAGNIT-KESASF 124
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
R+ P++ V GVV + S WNFP+NL++ + A+A GN V++KP+
Sbjct: 125 PGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPA 184
Query: 145 ELAVECASFLAETIPLYLDCKAIK-----------VTNGGVDVCEQLLQQKW-NKIFFTG 192
+ + + V G ++ + + I FTG
Sbjct: 185 SDTPVTG--------GVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTG 236
Query: 193 SPRVGSIVMSAA--AKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCN 248
S VG V A + V LELGG P ++ D DI + G F
Sbjct: 237 STPVGRRVGELAINGGPMKTVALELGGNAPFVVLADA-----DIDAAAQAAAVGAFLH-Q 290
Query: 249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLK 307
GQ+C+ ++ ++V+ +E +K +P + + +IN+ L++ ++
Sbjct: 291 GQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIE 350
Query: 308 DPLVADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
A + G E + P + D D EI EEIFGP++ ++ ++ + E
Sbjct: 351 LAKKEGATVQVEG--PIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAEL 408
Query: 367 INSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH 426
N+ L+ ++KD Q SG + ND V V FGG SG+GR++
Sbjct: 409 ANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHV-MFGGSKNSGLGRFN 467
Query: 427 GHYSFETFSHEKAI-MQRSFFLELEPRYP 454
G ++ E F+ ++ I ++RS
Sbjct: 468 GDWAIEEFTTDRWIGIKRS-----AENLY 491
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 2e-62
Identities = 96/433 (22%), Positives = 177/433 (40%), Gaps = 45/433 (10%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R LR ++++ N D + L + GK P E+ A+ L +
Sbjct: 79 RLAVLRKAADIIERNLDVFAEVLVMNAGK-PKSAAVGEVK-------AAVDRL-RLAELD 129
Query: 90 KRRL-----PLLFFPASGE----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVM 140
+++ P + + E V EP GVV + +N+P+ A+ + + GN V+
Sbjct: 130 LKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVV 189
Query: 141 LKPSELAVECASFLAET-----IPLYLDCKAIKVTNGGVDVCEQLLQ-QKWNKIFFTGSP 194
+KPS A+ + P AI + N E+++ + + FTGS
Sbjct: 190 VKPSISDPLPAAMAVKALLDAGFP----PDAIALLNLPGKEAEKIVADDRVAAVSFTGST 245
Query: 195 RVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVC 252
VG V+ + +ELGG PAI+ D D+ + +I G ++ GQ C
Sbjct: 246 EVGERVVKVGG--VKQYVMELGGGDPAIVLEDA-----DLDLAADKIARGIYSYA-GQRC 297
Query: 253 VGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLV 311
+ +L E+ L+E + + +P+D + +I+ + + ++D +
Sbjct: 298 DAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVE 357
Query: 312 ADA-IVHGGLLDKENLFIEPTILL---DPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
++ GG +++PT + D D + E+F P+ + + ++ ++IE
Sbjct: 358 KGGRVLAGGRRLGPT-YVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELA 416
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
N RP L F +D ++ V G++ ND + PFGG +SG+ R
Sbjct: 417 NGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGI-GYYPFGGRKKSGVFREGI 475
Query: 428 HYSFETFSHEKAI 440
Y+ E + K I
Sbjct: 476 GYAVEAVTAYKTI 488
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 3e-61
Identities = 132/433 (30%), Positives = 192/433 (44%), Gaps = 40/433 (9%)
Query: 26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW 85
SV R+ L +++ ++ +D I +A+ +LG + R + A LD +
Sbjct: 65 SVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNY 124
Query: 86 MAPKKRRLPLLFFPASGEVVSEPFGVV-LICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
++R VV E GV LI + WNFP N L A AAG+ V+LKPS
Sbjct: 125 EFEERR--------GDDLVVKEAIGVSGLI-TPWNFPTNQTSLKLAAAFAAGSPVVLKPS 175
Query: 145 ELAVECASFLAETIPLYLDCKA------IKVTNG-GVDVCEQLLQ-QKWNKIFFTGSPRV 196
E A LAE K + NG G V L + K + FTGS
Sbjct: 176 EETPFAAVILAEIFD-----KVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPT 230
Query: 197 GSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVG 254
GS +M AAK V+LELGGK P I+ D DIK K G + GQVC
Sbjct: 231 GSKIMEKAAKDFKKVSLELGGKSPYIVLDDV-----DIKEAAKATTGKVVNN-TGQVCTA 284
Query: 255 VDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVAD 313
+LV K + LK + NP++ + + II++ F++++ + +
Sbjct: 285 GTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEG 344
Query: 314 A-IVHGGLLDKENL----FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFIN 368
A + +GG E L F PTI ++ I EEIFGP++ +IT N++ E+I+ N
Sbjct: 345 AELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIAN 404
Query: 369 SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGH 428
LA Y KD+ ++ +G++ N+ LPFGG QSG+GR G
Sbjct: 405 DTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE---AGRKPDLPFGGYKQSGLGREWGD 461
Query: 429 YSFETFSHEKAIM 441
Y E F K+I
Sbjct: 462 YGIEEFLEVKSIA 474
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 3e-59
Identities = 124/441 (28%), Positives = 199/441 (45%), Gaps = 52/441 (11%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R N L + + +++ ++++ K L D GK P++ R E+ ++ K A
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGK-PIKQARVEVE-------RSIGTF-KLAAFY 108
Query: 90 KRRLPLLFFPASGE---VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSEL 146
+ P+ EP G+V + +NFP+NL+ + AIA GN ++ PS
Sbjct: 109 VKEHRDEVIPSDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSK 168
Query: 147 AVECASFLAETIPLYLDCKAIK-----------VTNGGVDVCEQLLQ-QKWNKIFFTGSP 194
A LA+ + A+K +T G V ++++ +K N I FTGS
Sbjct: 169 APLVCIELAK-----IIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSS 223
Query: 195 RVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVC 252
+VG ++ A + LELGG P I+ D D+ V +I G F GQVC
Sbjct: 224 KVGELITKKAG--FKKIALELGGVNPNIVLKDA-----DLNKAVNALIKGSFIYA-GQVC 275
Query: 253 VGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLV 311
+ V ILV++ A IE K NP D K+ + +I+ H E + K+++ +
Sbjct: 276 ISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAID 335
Query: 312 ADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR 370
++ GG ++ PTIL + D + E F P++PII N +E I+ NS
Sbjct: 336 EGGKLLLGG--KRDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANST 391
Query: 371 PKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT-LVQQLCDVLPFGGVGQSGIGRYHGHY 429
L FT D + G ++ ND+ L +Q D +PFGGV +SG+GR Y
Sbjct: 392 EYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQ--DNMPFGGVKKSGLGREGVKY 449
Query: 430 SFETFSHEKAIM----QRSFF 446
+ E S+ K I+ + +F
Sbjct: 450 AMEEMSNIKTIIISKAENLYF 470
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 3e-58
Identities = 101/446 (22%), Positives = 173/446 (38%), Gaps = 50/446 (11%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
RK L+ L +N D I + ++ G + E+ ++ L
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGG-TIIKSTIELE-------QTIAIL-DEAMTY 118
Query: 90 KRRLP-LLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKP 143
L + P+ E + P GV+ S +NFP+NL++ + AIA GN+V+ KP
Sbjct: 119 TGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKP 178
Query: 144 SELAVECASFLAETIPLYLDCKAIK----------VTNGGVDVCEQLLQQKW-NKIFFTG 192
+ + ++ + +L I FTG
Sbjct: 179 DIQTAISGGTIIAKA-------FEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG 231
Query: 193 SPRVGSIVMSAAAKHLTPVTLELGGKCPAI-LDTLSSPLDIKVTVKRIIGGKFASCNGQV 251
S VG + A + + LELGG P L D+ V I GKF GQ+
Sbjct: 232 STAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDA----DVDRAVDAAIFGKFIHQ-GQI 286
Query: 252 CVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPL 310
C+ ++ I+V + +E +K+ + D K+ + +INE E+ ++++
Sbjct: 287 CMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346
Query: 311 VADA-IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS 369
+ G + + P + + +++I E+F PI II + QE+I+ N
Sbjct: 347 TDGIELAVEG--KRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMAND 404
Query: 370 RPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHY 429
L+ FT D ++ SG ND V ++ FGG SG+GR+ +
Sbjct: 405 TEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNI-AFGGNKASGVGRFGNPW 463
Query: 430 SFETFSHEKAI-MQRSFFLELEPRYP 454
E F+ K I +Q+ +YP
Sbjct: 464 VVEEFTVTKWISIQKQ-----YRKYP 484
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 3e-58
Identities = 105/433 (24%), Positives = 183/433 (42%), Gaps = 37/433 (8%)
Query: 26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW 85
S R + ++E+ + + K + ++G + + + +
Sbjct: 83 SPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKE- 141
Query: 86 MAPKKRRLPLLFFPASGEVVSEPFGVV-LICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
+ ++ + + + GVV LI + WN+P+N +I A+ AG T++LKPS
Sbjct: 142 FSFQEALIEGNEQ---AILHYDAIGVVGLI-TPWNWPMNQVTLKVIPALLAGCTMVLKPS 197
Query: 145 ELAVECASFLAETIPLYLDCKA------IKVTNG-GVDVCEQLLQ-QKWNKIFFTGSPRV 196
E+A A AE + +A + NG G +V L I FTGS R
Sbjct: 198 EIAPLSAMLFAEILD-----EAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRA 252
Query: 197 GSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVG 254
G + A+ L V LELGGK I+ D DI ++R + F + +GQ C
Sbjct: 253 GKDISKNASNTLKRVCLELGGKGANIIFADA-----DID-ALQRGVRHCFYN-SGQSCNA 305
Query: 255 VDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVAD 313
+LVE+ I++ K +K + + I ++++ +++++ L++ +
Sbjct: 306 PTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEG 365
Query: 314 A-IVHGGLLDKENL----FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFIN 368
A +V GG + ++ PT+ D I EEIFGP+L ++ N E++ N
Sbjct: 366 ATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLAN 425
Query: 369 SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGH 428
L Y ++D + ++I + SG + N +L FGGV SG R G
Sbjct: 426 DTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG---HELPGGSYFGGVKFSGRAREGGL 482
Query: 429 YSFETFSHEKAIM 441
+ + F KAI
Sbjct: 483 WGIKEFLDTKAIS 495
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 1e-56
Identities = 121/445 (27%), Positives = 185/445 (41%), Gaps = 40/445 (8%)
Query: 16 RQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK 73
R F +G + R + A +++L + +D K L + G+ P
Sbjct: 56 RAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMG 115
Query: 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVV-LICSAWNFPINLALEPLIGA 132
+ Y DK + + R V EP GVV I AWN P+ LA+ + A
Sbjct: 116 AMNYFAGAADK-VTWTETRTGSYGQ---SIVSREPVGVVGAI-VAWNVPLFLAVNKIAPA 170
Query: 133 IAAGNTVMLKPSELAVECASFLAETIPLYLDCKA------IKVTNGGVDVCEQLLQ-QKW 185
+ AG T++LKP+ A+ LAE + + V GG++ + L
Sbjct: 171 LLAGCTIVLKPAAETPLTANALAEVF-----AEVGLPEGVLSVVPGGIETGQALTSNPDI 225
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGK 243
+ FTGS VG V AA+ L P TLELGGK AI+ D D+ + ++
Sbjct: 226 DMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDV-----DLAAAIPMMVFSG 280
Query: 244 FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDSKS-ISRIINEYHFER 301
+ GQ CV IL + ++ ++ + G P D + I +I+E R
Sbjct: 281 VMN-AGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVG-PPSDPAAQIGPLISEKQRTR 338
Query: 302 LRKLLKDPLVADA-IVHGG----LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
+ + + A +V GG LD FI+PT+ D I EEIFGP+L II
Sbjct: 339 VEGYIAKGIEEGARLVCGGGRPEGLDNGF-FIQPTVFADVDNKMTIAQEEIFGPVLAIIP 397
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGG 416
+ +++I N LA +T D +I +G+ N PFGG
Sbjct: 398 YDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINW---YAFDPGSPFGG 454
Query: 417 VGQSGIGRYHGHYSFETFSHEKAIM 441
SGIGR +G E F+ +K+++
Sbjct: 455 YKNSGIGRENGPEGVEHFTQQKSVL 479
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 194 bits (496), Expect = 1e-56
Identities = 97/448 (21%), Positives = 180/448 (40%), Gaps = 32/448 (7%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
+I++ + ++ + A R L + L+++ED++ K + ++GK + ++
Sbjct: 27 QIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGK-LLSESKE 85
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRL----PLLFFPASGEVVSEPFGVVLICSAWNFPI 122
E+ + + A + L + + + GV++ C WNFP+
Sbjct: 86 EV---ELCVSIC-----NYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPL 137
Query: 123 NLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC----KAIKVTNGGVDVCE 178
+ GN ++LK + A+ A+ + ++ D
Sbjct: 138 YQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAK---IIKRAGAPEGSLINLYPSYDQLA 194
Query: 179 QLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI-LDTLSSPLDIKVTV 236
++ + + TGS R GS V AA K+L T+ELGG I LD D +V
Sbjct: 195 DIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDA----DPQVLR 250
Query: 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIIN 295
+ + +GQVC I+VEK ++ LK +P ++ + + + +
Sbjct: 251 NVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNS 309
Query: 296 EYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP 353
E E+L +K+ + A A V +D + F PTIL D D + +E+FGPI
Sbjct: 310 EKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAE 369
Query: 354 IITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLP 413
+ + + +I+ N L D K++ + +G + N + LP
Sbjct: 370 VFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITS--GELP 427
Query: 414 FGGVGQSGIGRYHGHYSFETFSHEKAIM 441
FGG+ +SG GR F +E ++
Sbjct: 428 FGGIKKSGYGRELSGLGLMAFVNEHLVI 455
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-56
Identities = 101/447 (22%), Positives = 180/447 (40%), Gaps = 32/447 (7%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
EIE L+ F+ SVA R LR + + L+ + +++ + + +++GK P++ R
Sbjct: 30 EIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGK-PIKQARA 88
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRL----PLLFFPASGEVVSEPFGVVLICSAWNFPI 122
E+ KSA W A + P L + P GV+L WNFP+
Sbjct: 89 EV---TKSAALC-----DWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPL 140
Query: 123 NLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC----KAIKVTNGGVDVCE 178
L + + AGN+ +LK + CA +A + + N +
Sbjct: 141 WQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIAR---ILAEAGTPAGVYGWVNANNEGVS 197
Query: 179 QLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI-LDTLSSPLDIKVTV 236
Q++ + + TGS R G+ + + A L LELGG P I L+ D+++ V
Sbjct: 198 QMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA----DLELAV 253
Query: 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIIN 295
K + G++ GQVC +VE+ A + +P ++ + +
Sbjct: 254 KAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMAR 312
Query: 296 EYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP 353
+ L + ++ + A + G + E + T+L D D +E+FGP+
Sbjct: 313 FDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAA 372
Query: 354 IITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLP 413
I + ++ N L+ FT D+T ++ + G + N +
Sbjct: 373 ITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASD--ARVA 430
Query: 414 FGGVGQSGIGRYHGHYSFETFSHEKAI 440
FGGV +SG GR H+ F + + +
Sbjct: 431 FGGVKKSGFGRELSHFGLHEFCNVQTV 457
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 4e-54
Identities = 89/457 (19%), Positives = 156/457 (34%), Gaps = 79/457 (17%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAK---- 76
W +R + + L++ LG + + E+G I
Sbjct: 74 IWADIPAPKRGEIVRQIGDALREKIQ--------VLGS--LVSL--EMGKILVEGVGEVQ 121
Query: 77 YALSCLDKWMAPKKRRLPLLFFPASG-----EVVSEPFGVVLICSAWNFPI-----NLAL 126
+ D + R + P+ P G+V I +A+NFP+ N A+
Sbjct: 122 EYVDICD-YAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAI 180
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK-----VTNGGVDVCEQLL 181
A+ GN + K + + + + I L+ + +T GG D+ +
Sbjct: 181 -----AMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMA 235
Query: 182 QQKW-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI-LDTLSSPLDIKVTVKRI 239
+ + N + FTGS +VG V + LELGG I + D+ + V
Sbjct: 236 KDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDA----DLSLVVPSA 291
Query: 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYH 298
+ + GQ C + + + ++ LK + NP D + +
Sbjct: 292 LFAAVGTA-GQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQA 350
Query: 299 FERLRKLLKDPLVADAIVHGG--LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
+++ V G ++D+ ++EPTI+ DA I E F PIL +
Sbjct: 351 VSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFK 410
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQ------IV---SGTSSGSLIFNDT 403
N +E + N + L+ FTKD + IV TS +
Sbjct: 411 FQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEI----- 465
Query: 404 LVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
FGG +G GR G +++ +
Sbjct: 466 -------GGAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 3e-53
Identities = 102/444 (22%), Positives = 181/444 (40%), Gaps = 50/444 (11%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
W + LR + +++ +I + ++ GK + E+ +
Sbjct: 59 EWEALPAIERASWLRKISAGIRERASEISALIVEEGGK-IQQLAEVEVA-------FTAD 110
Query: 81 CLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
+D +MA RR + + GV WNFP L + A+
Sbjct: 111 YID-YMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLT 169
Query: 136 GNTVMLKPSELAVECASFLAETIPLYLDCKA--------IKVTNGGVDVCEQLLQQKW-N 186
GNT+++KPSE A A+ + + + V G V ++L
Sbjct: 170 GNTIVIKPSEFTPNNAIAFAK-----IVDEIGLPRGVFNL-VLGRGETVGQELAGNPKVA 223
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKF 244
+ TGS G +M+ AAK++T V LELGGK PAI+ D D+++ VK I+ +
Sbjct: 224 MVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDA-----DLELAVKAIVDSRV 278
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISR--IINEYHFERL 302
+ GQVC + + V+K + L ++ NP + I+ +IN ER+
Sbjct: 279 INS-GQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERV 337
Query: 303 RKLLKDPLVADA-IVHGG-LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
+ + + A + GG ++ + + PT+LLD + IM EE FGP+LP++ + +
Sbjct: 338 EQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
+++I N L +T++ + + G G N + G +S
Sbjct: 398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEA--MQGFHAGWRKS 455
Query: 421 GIGRYHGHYSFETFSHEKAIMQRS 444
GIG G + + + + +S
Sbjct: 456 GIGGADGKHGLHEYLQTQVVYLQS 479
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 5e-53
Identities = 98/441 (22%), Positives = 172/441 (39%), Gaps = 59/441 (13%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R L L+ D++ + + ++ GK E+ E+ ++ +
Sbjct: 66 RIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVT-------SMVNKVA-ISVQA 116
Query: 90 KRRLPLLFFPASGEVVS-----------EPFGVVLICSAWNFPINLALEPLIGAIAAGNT 138
R +GE +P GVV + +NFP +L ++ A+ AGN
Sbjct: 117 FRER-------TGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNC 169
Query: 139 VMLKPSELAVECASFLAETIPLYLDCKA------IKVTNGGVDVCEQLLQQKW-NKIFFT 191
V+ KPSEL + A + +A + + GG + L + + +FFT
Sbjct: 170 VVFKPSELTPKVAELTLK-----AWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFT 224
Query: 192 GSPRVGSIVMS-AAAKHLTPVTLELGGKCPAI-LDTLSSPLDIKVTVKRIIGGKFASCNG 249
GS R G+++ S + + LE+GG P + + D+ V II F S G
Sbjct: 225 GSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEE----VADLDAAVYTIIQSAFIS-AG 279
Query: 250 QVCVGVDYILVEK-----KFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLR 303
Q C +LV + A L+ T ++ G + + +I+ E L
Sbjct: 280 QRCTCARRLLVPQGAWGDALLARLVAVSAT-LR--VGRFDEQPAPFMGAVISLSAAEHLL 336
Query: 304 KLLKDPLV--ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ 361
K + + A ++ + P IL D AE EE FGP+L +I ++
Sbjct: 337 KAQEHLIGKGAQPLLAMTQPIDGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFA 395
Query: 362 ESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
+I N+ LA + +Q + + +G + +N L PFGG+G SG
Sbjct: 396 AAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAPFGGIGASG 454
Query: 422 IGRYHGHYSFETFSHEKAIMQ 442
R +Y+ + ++ A ++
Sbjct: 455 NHRPSAYYAADYCAYPVASLE 475
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 1e-51
Identities = 104/459 (22%), Positives = 177/459 (38%), Gaps = 37/459 (8%)
Query: 16 RQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD---EIGLIK 72
+ F++ + R N L +++ + + L + GK E D I ++
Sbjct: 84 DEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLE 143
Query: 73 KSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGA 132
A+ + K+ P GV + S WNF + + + +
Sbjct: 144 YYARQM----IELNRGKEILSRPGEQ---NRYFYTPMGVTVTISPWNFALAIMVGTAVAP 196
Query: 133 IAAGNTVMLKPSELAVECASFLAETIPLYLDCKA------IKVTNG-GVDVCEQLLQ-QK 184
I GNTV+LKP+ A+ E + A I G G +V + L+ K
Sbjct: 197 IVTGNTVVLKPASTTPVVAAKFVEVLE-----DAGLPKGVINYVPGSGAEVGDYLVDHPK 251
Query: 185 WNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238
+ I FTGS VG + AA HL V +E+GGK ++D D+ + +
Sbjct: 252 TSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD---RDADLDLAAES 308
Query: 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEY 297
I+ F +GQ C ++ K ++E K +P + + + +I+E
Sbjct: 309 ILVSAFGF-SGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEK 367
Query: 298 HFERLRKLLKDPLVADAIVHGGLLDKEN-LFIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
FE++ ++ ++ GG D FI+PTI+ D +A IM EEIFGP++
Sbjct: 368 AFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGG 416
N+ ++E N+ L T++ +Q G+L FN + PFGG
Sbjct: 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGG 487
Query: 417 VGQSGIG-RYHGHYSFETFSHEKAIMQRSFFLELEPRYP 454
SG + G K + + + L +
Sbjct: 488 FKMSGTDSKAGGPDYLALHMQAKTVSEM-YAENLYFQSH 525
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 2e-50
Identities = 97/459 (21%), Positives = 184/459 (40%), Gaps = 40/459 (8%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E E L + F++ R L L++ + ++ L ++GK + +
Sbjct: 75 EAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK----NWVE 130
Query: 67 EIGLIKKSAK----YALSCLDKWMAPKKRRLPLLFFPA-SGEVVSEPFGVVLICSAWNFP 121
+ ++ YA + ++ P + ++ +P E P G ++ + WNFP
Sbjct: 131 ASADVAEAIDFIEYYARAA-LRYRYP---AVEVVPYPGEDNESFYVPLGAGVVIAPWNFP 186
Query: 122 INLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IP---LYLDCKAIKVTNGG 173
+ + ++G +A GNTV+ KP+E AV + + E P + + G
Sbjct: 187 VAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNF------LPGVG 240
Query: 174 VDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTL 226
+V L++ + I FTGS VG + AA + +E GGK I+D
Sbjct: 241 EEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVD-- 298
Query: 227 SSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKD 286
D + + ++ + GQ C +++ + ++E + ++ ++
Sbjct: 299 -ETADFDLAAEGVVVSAYGF-QGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEE 356
Query: 287 SKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKEN-LFIEPTILLDPPLDAEIMTE 345
+ + +++ ++ ++ +V GG + FI PT+ + P A I E
Sbjct: 357 NPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQE 416
Query: 346 EIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLV 405
EIFGP+L +I + + E++E N P L +++ + G+L FN +
Sbjct: 417 EIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKIT 476
Query: 406 QQLCDVLPFGGVGQSGIGRYHG-HYSFETFSHEKAIMQR 443
L V PFGG SG G F KA+ +R
Sbjct: 477 GALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 2e-50
Identities = 92/360 (25%), Positives = 150/360 (41%), Gaps = 50/360 (13%)
Query: 107 EPFGVVLICSAWNFPINLA---LEPLIGAIAAGNTVMLKPSEL----AVECASFLAETIP 159
+P GVV + WN+P+ +A L P A+AAGN V+LKPSE+ A++ A + P
Sbjct: 158 DPLGVVASIAPWNYPLMMAAWKLAP---ALAAGNCVVLKPSEITPLTALKLAELAKDIFP 214
Query: 160 LYLDCKA--IKVTNG-GVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
A + + G G V + L K + TGS G ++S A + +EL
Sbjct: 215 ------AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMEL 268
Query: 216 GGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLK 273
GGK P I+ D DI+ V+ + + + GQ C I +K TL+E L
Sbjct: 269 GGKAPVIVFDDA-----DIEAVVEGVRTFGYYN-AGQDCTAACRIYAQKGIYDTLVEKLG 322
Query: 274 TTIKKFYGENPKDSKS-ISRIINEYHFERLRKLL---KDPLVADAIVHGGLLDKENLFIE 329
+ P D + + + + H ER+ K + K I G +
Sbjct: 323 AAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYA 382
Query: 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD----ETF 385
PT+L D I+ +E+FGP++ + +N ++ + + N LA +TKD
Sbjct: 383 PTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 442
Query: 386 KKQIVSGT----SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
++ G + L+ +P GG SG G+ Y E ++ + +M
Sbjct: 443 SARLQYGCTWVNTHFMLVSE----------MPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 1e-49
Identities = 90/363 (24%), Positives = 150/363 (41%), Gaps = 50/363 (13%)
Query: 104 VVSEPFGVVLICSAWNFPINLA---LEPLIGAIAAGNTVMLKPSEL----AVECASFLAE 156
+ +P G+V + WN+P+ + L P AI GNTV+ KPSE A++ A +A+
Sbjct: 157 IRRDPIGIVGSIAPWNYPLMMMAWKLAP---AIGGGNTVVFKPSEQTPLTALKLARLIAD 213
Query: 157 TIPLYLDCKA--IKVTNG-GVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVT 212
+P + V G G V L+ K + TG G V++AAAK +
Sbjct: 214 ILP------EGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTH 267
Query: 213 LELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIE 270
LELGGK P I+ D D++ V I + + GQ C I E L+
Sbjct: 268 LELGGKAPVIVYGDA-----DLEAVVNGIRTFGYYN-AGQDCTAACRIYAEAGIYEKLVA 321
Query: 271 SLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLL---KDPLVADAIVHGGLLDKENL 326
L + + D+++ I +I+ +R+ + D + G E
Sbjct: 322 DLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGF 381
Query: 327 FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD---- 382
F +PT++ + EI+ E+FGP++ + +++ + N LA +TKD
Sbjct: 382 FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKA 441
Query: 383 ETFKKQIVSGT----SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEK 438
++ G + L +P GG+ QSG G+ Y+ E ++ +
Sbjct: 442 MRAASRLQYGCTWINTHFMLTNE----------MPHGGIKQSGYGKDMSVYALEDYTAVR 491
Query: 439 AIM 441
IM
Sbjct: 492 HIM 494
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 5e-49
Identities = 69/469 (14%), Positives = 145/469 (30%), Gaps = 79/469 (16%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R +L +++LLQ + + G +I + L + A
Sbjct: 68 RAARLADIVKLLQAKRGDYYAIATANSGT-TRNDSAVDID-------GGIFTL-SYYAKL 118
Query: 90 KRRLPLLFFPASGE--------------VVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
L + G V+S GV L +A+NFP E A+ +
Sbjct: 119 GASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLS 178
Query: 136 GNTVMLKPSELAVECASFLAETIPLYLDCKAIK--------VTNGGVDVCEQLLQQKWNK 187
G V++KP+ + + A + + +Q+ +
Sbjct: 179 GVPVIVKPATATAWLTQRMVADV-----VDAGILPPGALSIICGSSAGLLDQIRSF--DV 231
Query: 188 IFFTGSPRVGSIVMSAAAK--HLTPVTLELGGKCPAIL----DTLSSPLDIKVTVKRIIG 241
+ FTGS + + + A + ++ AIL + D + +K ++
Sbjct: 232 VSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFD--LFIKEVVR 289
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRI---INEYH 298
GQ C + V + ++E+LK + K NP++ R+ ++
Sbjct: 290 EMTVKS-GQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV--RMGSLVSREQ 346
Query: 299 FERLRKLLKDPLVADAIVHGG---LLDKENL----FIEPTILL--DPPLDAEIMTEEIFG 349
+E + + + + L + + P + + DP + E+FG
Sbjct: 347 YENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFG 406
Query: 350 PILPIIT--------LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
P+ + ++ L ++ D+ ++ + +
Sbjct: 407 PVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVH 466
Query: 402 D---------TLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAI 440
T + + GG G++G G G + + AI
Sbjct: 467 AISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 1e-48
Identities = 123/461 (26%), Positives = 204/461 (44%), Gaps = 58/461 (12%)
Query: 26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW 85
S A R LRA+ + + + ++ K D GK P++ +I + +Y +K
Sbjct: 70 SGAVRARYLRAIAAKVTEKKPELAKLESIDCGK-PLDEAAWDIDDVAGCFEYYADLAEKL 128
Query: 86 MAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA---LEPLIGAIAAGNTVMLK 142
A +K + L V+ EP GVV + + WN+P+ +A + P A+AAG +LK
Sbjct: 129 DARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAP---ALAAGCAAILK 185
Query: 143 PSEL----AVECASFLAET-IPLYLDCKAIKVTNG-GVDVCEQLLQ-QKWNKIFFTGSPR 195
PSEL +E E +P + + G G + L +K+ FTGS
Sbjct: 186 PSELASLTCLELGEICKEVGLP----PGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 196 VGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCV 253
GS +M+AAA+ + PV+LELGGK P ++ D D+ + I G F + NGQ+C
Sbjct: 242 TGSKIMTAAAQLVKPVSLELGGKSPLVVFEDV-----DLDKAAEWAIFGCFWT-NGQICS 295
Query: 254 GVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVA 312
+++ + A + + IK +P + + +++E +E++ K + +
Sbjct: 296 ATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSE 355
Query: 313 DA-IVHGG----LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
A I+ GG L K FIEPTI+ D + +I EE+FGP+L + T + +E+I+
Sbjct: 356 GATILTGGSRPEHLKK-GFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLA 414
Query: 368 NSRPKPLAIYAFTKD----ETFKKQIVSGTSSGSLI----FNDTLVQQLCDVLPFGGVGQ 419
N L + D E K +G + Q P+GGV +
Sbjct: 415 NDTVYGLGAAVISNDLERCERVTKAFKAGI-----VWVNCSQPCFTQ-----APWGGVKR 464
Query: 420 SGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFK 460
SG GR G + + + K + Q + PW ++
Sbjct: 465 SGFGRELGEWGLDNYLSVKQVTQY-----ISEE--PWGWYQ 498
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 4e-48
Identities = 106/371 (28%), Positives = 167/371 (45%), Gaps = 45/371 (12%)
Query: 107 EPFGVVLICSAWNFPINLA---LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163
P GV + AWN+P +A P A+ AGN ++ KPSE A +AE +
Sbjct: 149 VPLGVCVGIGAWNYPQQIACWKAAP---ALVAGNAMVFKPSENTPLGALKIAE-----IL 200
Query: 164 CKA------IKVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELG 216
+A V G D L+ K+ TGS G V +AAA HL VT+ELG
Sbjct: 201 IEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELG 260
Query: 217 GKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKT 274
GK P I+ D DI+ V + G F S +GQVC + V+KK A +E+LK
Sbjct: 261 GKSPMIVFDDA-----DIESAVGGAMLGNFYS-SGQVCSNGTRVFVQKKAKARFLENLKR 314
Query: 275 TIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA-IVHGGLLDKENL----FI 328
+ +P D + + ++++ E++ ++ A ++ GG + ++
Sbjct: 315 RTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYV 374
Query: 329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388
+PT+ D D I EEIFGP++ ++ ++ E + N+ LA FT D +
Sbjct: 375 QPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHR 434
Query: 389 IVSGTSSGSL---IFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445
+V G +G+L +N V+ +PFGG QSG GR + + E +S K +
Sbjct: 435 VVDGLEAGTLWINTYNLCPVE-----IPFGGSKQSGFGRENSAAALEHYSELKTVY---- 485
Query: 446 FLELEPRYPPW 456
+ P+
Sbjct: 486 -VSTGKVDAPY 495
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 171 bits (437), Expect = 5e-48
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 53/364 (14%)
Query: 107 EPFGVVLICSAWNFPINLA---LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163
EP GV AWN+P +A P A+A GN V+ KPS + LAE
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAP---ALACGNAVVFKPSPMTPVTGVILAEIFH---- 206
Query: 164 CKA------IKVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELG 216
+A + V GG + L K+ FTGS G VM +AK + VTLELG
Sbjct: 207 -EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELG 265
Query: 217 GKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKT 274
GK P ++ D +++ V+ + F + GQVC + V+++ +E +
Sbjct: 266 GKSPLLIFKDC-----ELENAVRGALMANFLT-QGQVCTNGTRVFVQREIMPQFLEEVVK 319
Query: 275 TIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKD------PLVA--DAIVHGGLLDKEN 325
K +P +++ + +I++ +++ + ++ + + K
Sbjct: 320 RTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNG 379
Query: 326 LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD--- 382
F+ P +L + D + EEIFGP++ ++ + +E ++ N+ LA FT+D
Sbjct: 380 YFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439
Query: 383 -ETFKKQIVSGT----SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHE 437
+ +GT + ++ + V+ +PFGG SG GR +G + + +S
Sbjct: 440 AHRVAANLEAGTCYINT-----YSISPVE-----VPFGGYKMSGFGRENGQATVDYYSQL 489
Query: 438 KAIM 441
K ++
Sbjct: 490 KTVI 493
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 6e-47
Identities = 118/458 (25%), Positives = 182/458 (39%), Gaps = 64/458 (13%)
Query: 16 RQTFRSGI---TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIK 72
RQ F+ G T + R L L +L++ + + + GK Y ++G
Sbjct: 68 RQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCI 127
Query: 73 KSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----EPFGVVLICSAWNFPINLA--- 125
K+ +Y DK P G + EP GV WNFP+ +
Sbjct: 128 KTLRYCAGWADKIQG--------RTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA------IKVTNG-GVDVCE 178
+ P A++ GNTV++KP+E A + L +A + + G G
Sbjct: 180 IGP---ALSCGNTVVVKPAEQTPLTALHMGS-----LIKEAGFPPGVVNIVPGYGPTAGA 231
Query: 179 QLLQ-QKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAIL--DTLSSPLDIKV 234
+ +K+ FTGS VG ++ AA K +L V+LELGGK P I+ D D+
Sbjct: 232 AISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADA-----DLDN 286
Query: 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRI 293
V+ G F GQ C+ + VE+ + KK+ NP
Sbjct: 287 AVEFAHQGVFYH-QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQ 345
Query: 294 INEYHFERLRKLLKDPLV--ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPI 351
I++ +E++ L++ A GG + FI+PT+ D D I EEIFGP+
Sbjct: 346 IDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPV 405
Query: 352 LPIITLNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQIVSGT----SSGSLIFNDT 403
I+ ++ + I+ N+ L+ FT D T + SGT ++
Sbjct: 406 QQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNC-----YSVV 460
Query: 404 LVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
Q PFGG SG GR G Y F ++ K +
Sbjct: 461 SAQ-----CPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 6e-47
Identities = 121/464 (26%), Positives = 194/464 (41%), Gaps = 73/464 (15%)
Query: 16 RQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK 73
R+ F +G S A R + + +L+ ++++ ++GK P+ R EIG
Sbjct: 71 RKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGK-PIAQARGEIGFCAD 129
Query: 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA---LEPLI 130
YA + + G V+ EP GVV I + WNFP +A +
Sbjct: 130 LWSYAAGQARALEG---QTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPW-- 184
Query: 131 GAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA------IKVTNG------------ 172
AI +G TV+LKPSE + LAE L +A V G
Sbjct: 185 -AIGSGCTVVLKPSEFTSGTSIRLAE-----LAREAGIPDGVFNVVTGYGDPAGQVLAED 238
Query: 173 -GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSP 229
VD + FTGS RVG+ + AA+ + V LELGGK P I+ D
Sbjct: 239 PNVD-----------MVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADA---- 283
Query: 230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS 289
D+ I G + + GQ C+ +LV++ L+E L +K +P + ++
Sbjct: 284 -DLDAAADGIAYGVYHN-AGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERT 341
Query: 290 -ISRIINEYHFERLRKLLKDPLVADA-IVHGG--LLDKENLFIEPTILLDPPLDAEIMTE 345
I +I+E H E++ + + + A ++ GG + + L+ PT+ D I E
Sbjct: 342 KIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIARE 401
Query: 346 EIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQIVSGTSSGSLI-- 399
EIFGP+L +T E++ N+ L+ ++ + ++I +G I
Sbjct: 402 EIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW---INS 458
Query: 400 FNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443
D + LP GG +SG+GR G Y F+ +S K +
Sbjct: 459 VIDGTPE-----LPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 6e-47
Identities = 104/445 (23%), Positives = 182/445 (40%), Gaps = 57/445 (12%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
AW K N LR +++N+ + L + GK + E+ +
Sbjct: 65 AWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGK-LLSVAEMEV-------DVTAT 116
Query: 81 CLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
+D + + P+ + + P GVV+ +AWNFP+ LA + A+
Sbjct: 117 FID-YGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALIT 175
Query: 136 GNTVMLKPSELAVECASFLAETIPLYLDCKAIK----------VTNGGVDVCEQLLQQKW 185
GNT++LKP++ + L A + + G V + L +
Sbjct: 176 GNTMVLKPTQETPLATTELGRI--------AKEAGLPDGVLNVINGTGSVVGQTLCESPI 227
Query: 186 -NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGG 242
I TGS G + +A+++TPV LELGGK P ++ D D+ + + G
Sbjct: 228 TKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDA-----DLDKAAEDALWG 282
Query: 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHFER 301
+FA+C GQVC V+ + V + +K G+ + N+ +
Sbjct: 283 RFANC-GQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDN 341
Query: 302 LRKLLKDPLVADAIV------HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPII 355
+ ++ + + A V + + EPT+L+D D ++ EE FGPILPI+
Sbjct: 342 IDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIV 401
Query: 356 TLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFG 415
+++++++IEF N L+ Y T+ Q +S G + N + +Q
Sbjct: 402 KVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ--HQGFHN 459
Query: 416 GVGQSGIGRYHGHYSFETFSHEKAI 440
G QSG G G + E + +K +
Sbjct: 460 GWKQSGFGGEDGKFGLEQYLEKKTV 484
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 8e-47
Identities = 115/470 (24%), Positives = 198/470 (42%), Gaps = 61/470 (12%)
Query: 16 RQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK 73
R+ F SG ++ R ++RA+ + ++++ + + + D GK E+Y D + I
Sbjct: 80 RRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYAD-MDDIHN 138
Query: 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA---LEPLI 130
Y DK + ++V EP GVV + WN+P+ A + P
Sbjct: 139 VFMYFAGLADKDGG---EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAP-- 193
Query: 131 GAIAAGNTVMLKPSEL----AVECASFLAET-IPLYLDCKAIKVTNG-GVDVCEQLLQ-Q 183
A+A G ++++KPSE+ + + E P I + G G +V + + +
Sbjct: 194 -ALATGCSLVMKPSEITPLTTIRVFELMEEVGFP----KGTINLILGAGSEVGDVMSGHK 248
Query: 184 KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIG 241
+ + + FTG G +M AA ++T + LELGGK P I+ D D ++ V + +
Sbjct: 249 EVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA-----DFELAVDQALN 303
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFE 300
G + GQVC ILV+ ++L +KK N D+ + + +I+ H
Sbjct: 304 GGYFH-AGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRN 362
Query: 301 RLRKLLKD------PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPI 354
++ + + K+ LF EPT++ + I+ EE+FGP++ +
Sbjct: 363 KIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTV 422
Query: 355 ITLNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQIVSGTSSGSLI----FNDTLVQ 406
QE+I+ N LA F+KD + ++ GT + F+ Q
Sbjct: 423 EGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGT-----VWINDFHPYFAQ 477
Query: 407 QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPW 456
P+GG QSGIGR G E + K I+ P+ W
Sbjct: 478 -----APWGGYKQSGIGRELGKEGLEEYLVSKHILTN-----TNPQLVNW 517
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 4e-46
Identities = 116/456 (25%), Positives = 185/456 (40%), Gaps = 60/456 (13%)
Query: 16 RQTFRSGI---TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIK 72
R F+ G + R L L +L++ + + D GK V +Y ++ ++
Sbjct: 67 RAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVL 126
Query: 73 KSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----EPFGVVLICSAWNFPINLA--- 125
K +Y DK+ P G+ S EP GV WNFP+ +
Sbjct: 127 KCLRYYAGWADKYHG--------KTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 178
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA------IKVTNG-GVDVCE 178
L P A+A GN V++K +E A ++A L +A + + G G
Sbjct: 179 LGP---ALATGNVVVMKVAEQTPLTALYVAN-----LIKEAGFPPGVVNIVPGFGPTAGA 230
Query: 179 QLLQ-QKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAIL--DTLSSPLDIKV 234
+ + +K+ FTGS +G ++ AA +L VTLELGGK P I+ D D+
Sbjct: 231 AIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDA-----DMDW 285
Query: 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRI 293
V++ F + GQ V++ +E K NP DSK+
Sbjct: 286 AVEQAHFALFFN-QGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQ 344
Query: 294 INEYHFERLRKLLKDPLV--ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPI 351
++E F+++ + A + GG+ FI+PT+ D I EEIFGP+
Sbjct: 345 VDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPV 404
Query: 352 LPIITLNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQIVSGTSSGSLI--FNDTLV 405
+ I+ I+E + N+ LA FTKD + + +GT + ++
Sbjct: 405 MQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW---VNCYDVFGA 461
Query: 406 QQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
Q PFGG SG GR G Y + ++ K +
Sbjct: 462 Q-----SPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 8e-46
Identities = 111/480 (23%), Positives = 194/480 (40%), Gaps = 80/480 (16%)
Query: 16 RQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSA 75
+ F+ RK L + EL++ + D++ D G+ + R ++ ++
Sbjct: 74 HEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQ-VLRIVRAQVARAAENF 132
Query: 76 KYALSCLDKWMAPKKRRLPLLFFPASGEVVS----EPFGVVLICSAWNFPINLA---LEP 128
+ + M + FP + + P G V I + WN P+ L+ + P
Sbjct: 133 AFYAEYAEHAMEDR-------TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185
Query: 129 LIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC------------------KAIKVT 170
A+A GNTV+LKP+E + A+ LAE + + A+ V
Sbjct: 186 ---ALAFGNTVVLKPAEWSPFTATKLAE---ILKEADLPPGVFNLVQGFGEEAGAAL-VA 238
Query: 171 NGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSS 228
+ V + TG G IVM AA HL ++ ELGGK PA++ D
Sbjct: 239 HPLVP-----------LLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADA--- 284
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
D++ + ++ F+ NG+ C +LVE+K + + + +P D +
Sbjct: 285 --DLERALDAVVFQIFSF-NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341
Query: 289 S-ISRIINEYHFERLRKLLKD------PLVADAIVHGGLLDKENL----FIEPTILLDPP 337
+ + +I+ H +R+ ++ L+ E+L ++ PT+ +
Sbjct: 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGEN 401
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
+I EEIFGP+L I + +E++ N LA Y FT+D ++ +G
Sbjct: 402 -HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGM 460
Query: 398 LIFNDTLVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPW 456
+ N + + PFGGV SG R G Y+ + ++ K I L L P + P
Sbjct: 461 VYLNS---HNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA-----LPLRPPHVPK 512
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 2e-45
Identities = 111/458 (24%), Positives = 190/458 (41%), Gaps = 59/458 (12%)
Query: 16 RQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKI--FKALHQDLGKHPVETYRDEIGLI 71
++ F +G+ + R L L ++++ +++++ +AL D G + +G+
Sbjct: 84 KEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEAL--DAGAVYTLALKTHVGMS 141
Query: 72 KKSAKYALSCLDKWM---APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA--- 125
++ +Y DK P + P EP GV I WN+P+ +
Sbjct: 142 IQTFRYFAGWCDKIQGATIPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWK 198
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA------IKVTNGGVDVCEQ 179
+AAGNTV++KP+++ A AE L KA + + G + Q
Sbjct: 199 TAA---CLAAGNTVVIKPAQVTPLTALKFAE-----LTLKAGIPKGVVNILPGSGSLVGQ 250
Query: 180 LLQQ--KWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAIL--DTLSSPLDIKV 234
L KI FTGS VG +M + A ++ V+LELGGK P I+ D D+
Sbjct: 251 RLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADC-----DLNK 305
Query: 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRI 293
V+ + F + G+ C+ + VE+ ++ + ++K NP + +
Sbjct: 306 AVQMGMSSVFFN-KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364
Query: 294 INEYHFERLRKLLKDPLVADA-IVHGGL-LDKENLFIEPTILLDPPLDAEIMTEEIFGPI 351
+E H +L + + + A +V GG + + F +PT+ D I EE FGPI
Sbjct: 365 NHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPI 424
Query: 352 LPIIT--LNNIQESIEFINSRPKPLAIYAFTKD----ETFKKQIVSGTSSGSLI--FNDT 403
+ I ++ + N+ LA FT+D ++ +GT I +N T
Sbjct: 425 MIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF---INTYNKT 481
Query: 404 LVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
V PFGG QSG G+ G + + K +
Sbjct: 482 DVA-----APFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 1e-44
Identities = 89/456 (19%), Positives = 165/456 (36%), Gaps = 40/456 (8%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E+ D +A + F + R L + + ++ ++GK +
Sbjct: 569 EVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGK----QWDQ 624
Query: 67 EIGLIKKSAK----YALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPI 122
+ ++ YA + + P EP GV + + WNFP+
Sbjct: 625 AYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGEL----NHYFYEPKGVAAVIAPWNFPL 680
Query: 123 NLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IP---LYLDCKAIKVTNGGV 174
+++ AI GN V+ KPS + L E +P G
Sbjct: 681 AISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNF------TPGRGS 734
Query: 175 DVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTLS 227
+ + L+ + I FTGS G ++ AAK ++ + E+GGK I+D
Sbjct: 735 VMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIID--- 791
Query: 228 SPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDS 287
D+ V ++ F GQ C ++V IE L + K +D
Sbjct: 792 DDADLDEAVPHVLYSAFGFQ-GQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDP 850
Query: 288 KS-ISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKEN-LFIEPTILLDPPLDAEIMTE 345
+ + + ++ + +++ + +++ + F+ TI+ + I E
Sbjct: 851 ANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQE 910
Query: 346 EIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLV 405
EIFGP+L ++ + ++IE+ NS L F++ + G+L N
Sbjct: 911 EIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNT 970
Query: 406 QQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAI 440
L + PFGG SG+G + G F + +
Sbjct: 971 GALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVV 1006
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 2e-44
Identities = 116/439 (26%), Positives = 184/439 (41%), Gaps = 51/439 (11%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
W LR +L+ N D I + + GK P+ R E+ YA S
Sbjct: 85 GWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGK-PLAEARGEV-------LYAAS 136
Query: 81 CLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
++ W A + +R+ PA V+ +P GV + WNFP + A+AA
Sbjct: 137 FIE-WFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAA 195
Query: 136 GNTVMLKPSELAVECASFLAETIPLYLDCKAIK----------VTNGGVDVCEQLLQQKW 185
G T++++P++L A L A K VT ++ +L
Sbjct: 196 GCTMIVRPADLTPLTALALGVL--------AEKAGIPAGVLQIVTGKAREIGAELTSNDT 247
Query: 186 -NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGG 242
K+ FTGS VG ++M+ A + ++LELGG P I+ D D+ V +
Sbjct: 248 VRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDA-----DLDAAVDGAMVS 302
Query: 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFER 301
K+ + GQ CV + I V++ E L +K+ G + I +I E +
Sbjct: 303 KYRNA-GQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITK 361
Query: 302 LRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ 361
++ ++D + A + G + LF EP IL D + EE FGP+ P+ + +
Sbjct: 362 VKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEE 421
Query: 362 ESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
E I N LA Y +T++ + ++ G + N L+ +V PFGGV QSG
Sbjct: 422 EVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISN--EVAPFGGVKQSG 479
Query: 422 IGRYHGHYSFETFSHEKAI 440
+GR Y E + K I
Sbjct: 480 LGREGSKYGIEEYLETKYI 498
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 6e-44
Identities = 119/439 (27%), Positives = 195/439 (44%), Gaps = 49/439 (11%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
AWR LR L+ +++D + + + + GK P+ + EI YA S
Sbjct: 62 AWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGK-PLAEAKGEI-------SYAAS 113
Query: 81 CLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
++ W A + +R+ P V+ +P GV + WNFP + A+AA
Sbjct: 114 FIE-WFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAA 172
Query: 136 GNTVMLKPSELAVECASFLAETIPLYLDCKA--------IKVTNGGVDVCEQLLQQKW-N 186
G T++LKP+ A LAE L +A + VT V +L
Sbjct: 173 GCTMVLKPASQTPFSALALAE-----LAIRAGVPAGVFNV-VTGSAGAVGNELTSNPLVR 226
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKF 244
K+ FTGS +G +M AK + V+LELGG P I+ D D+ V+ + KF
Sbjct: 227 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDA-----DLDKAVEGALASKF 281
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFERLR 303
+ GQ CV + + V+ E L+ + K + G+ + +I +I+E ++
Sbjct: 282 RNA-GQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVE 340
Query: 304 KLLKDPLVADA-IVHGG-LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ 361
+ + D L A +V GG ++ F +PTIL+D P +A++ EE FGP+ P+ +
Sbjct: 341 EHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEA 400
Query: 362 ESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
+ I N LA Y + +D + ++ G + N ++ +V PFGG+ SG
Sbjct: 401 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISN--EVAPFGGIKASG 458
Query: 422 IGRYHGHYSFETFSHEKAI 440
+GR Y E + K +
Sbjct: 459 LGREGSKYGIEDYLEIKYM 477
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 6e-44
Identities = 110/433 (25%), Positives = 176/433 (40%), Gaps = 47/433 (10%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R+ L + + L++N ++I + L + GK P + + E+ YA D + A
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCMEHGK-PWKEAQGEV-------DYAAGFFD-YCAKH 123
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
L P + V P GV + WNFPI + + L A+AAG ++KP+
Sbjct: 124 ISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPA 183
Query: 145 ELAVECASFLAETIPLYLDCKAIK----------VTNGGVDVCEQLLQQKW-NKIFFTGS 193
K V + + L + K + FTGS
Sbjct: 184 SETPLTMIAFFSV--------MDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGS 235
Query: 194 PRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQV 251
VG ++ A+ + + LELGG P I+ D D++ +I KF GQ
Sbjct: 236 TEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDA-----DLEAAADNLIANKFRGG-GQT 289
Query: 252 CVGVDYILVEKKFAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFERLRKLLKDPL 310
CV + I V +K A + L + K G+ D I +IN+ F+++++ L+D L
Sbjct: 290 CVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDAL 349
Query: 311 VADA-IVHGG--LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
A +V G + LF PT++ + EE FGP++P+ +E I+
Sbjct: 350 DKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAG 409
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
N LA Y FT D +++ +G G + +N PFGG+ SGIGR G
Sbjct: 410 NDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGMKASGIGREGG 467
Query: 428 HYSFETFSHEKAI 440
F + +
Sbjct: 468 LEGLFEFVEAQTV 480
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 8e-44
Identities = 115/439 (26%), Positives = 188/439 (42%), Gaps = 49/439 (11%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
WR LR +L+ N D + L + GK P+ + EI YA S
Sbjct: 65 GWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGK-PLAEAKGEI-------AYAAS 116
Query: 81 CLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
++ W A + +R+ P VV EP GV + WNFP + + A+AA
Sbjct: 117 FIE-WFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAA 175
Query: 136 GNTVMLKPSELAVECASFLAETIPLYLDCKA--------IKVTNGGVDVCEQLLQQKW-N 186
G +++KP+E A +A L +A + V + ++
Sbjct: 176 GCPIVVKPAESTPFSALAMAF-----LAERAGVPKGVLSV-VIGDPKAIGTEITSNPIVR 229
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGGKF 244
K+ FTGS VG ++M+ +A + +TLELGG P I+ D D+ V+ I K+
Sbjct: 230 KLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDA-----DLDAAVEGAIASKY 284
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFERLR 303
+ GQ CV + V ++ + L + K G + ++ +INE +++
Sbjct: 285 RNN-GQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVE 343
Query: 304 KLLKDPLVADA-IVHGG-LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ 361
+ D L A ++ GG + F EPT+L D ++ EE FGP+ P+ + +
Sbjct: 344 SHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEE 403
Query: 362 ESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
E + N LA Y +++D ++ G + N L+ +V PFGGV QSG
Sbjct: 404 ELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISN--EVAPFGGVKQSG 461
Query: 422 IGRYHGHYSFETFSHEKAI 440
+GR HY + + K +
Sbjct: 462 LGREGSHYGIDDYVVIKYL 480
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 9e-43
Identities = 117/444 (26%), Positives = 195/444 (43%), Gaps = 55/444 (12%)
Query: 28 AWRK-------NQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
WR+ + LR L+ N+D + + + + GK P++ EI Y+
Sbjct: 63 RWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGK-PLKEAHGEI-------LYSAF 114
Query: 81 CLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAA 135
L+ W + + RR+ + V+ +P GV + + WNFP + + A+AA
Sbjct: 115 FLE-WFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAA 173
Query: 136 GNTVMLKPSELAVECASFLAETIPLYLDCKA--------IKVTNGG--VDVCEQLLQQKW 185
G TV++KP+E A LAE L +A + + +V E +
Sbjct: 174 GCTVVVKPAEDTPFSALALAE-----LASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPL 228
Query: 186 -NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL--DTLSSPLDIKVTVKRIIGG 242
+KI FTGS G I++ AA + V++ELGG P I+ ++ V +
Sbjct: 229 VSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSA-----NVDQAVAGAMAS 283
Query: 243 KFASCNGQVCVGVDYILVEK----KFAATLIESLKTTIKKFYGENPKDSKSISRIINEYH 298
KF + GQ CV + LV++ F E++K ++ G ++ + +INE
Sbjct: 284 KFRNT-GQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLR--VGNGFEEGTTQGPLINEKA 340
Query: 299 FERLRKLLKDPLVADA-IVHGG-LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
E++ K + D + A +V GG F EPT+L + D EE FGP+ P+I
Sbjct: 341 VEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIK 400
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGG 416
+ +E+I N+ LA Y +++D ++ G + N+ L+ PFGG
Sbjct: 401 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISS--VECPFGG 458
Query: 417 VGQSGIGRYHGHYSFETFSHEKAI 440
V QSG+GR Y + + K +
Sbjct: 459 VKQSGLGREGSKYGIDEYLELKYV 482
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 4e-41
Identities = 99/459 (21%), Positives = 172/459 (37%), Gaps = 39/459 (8%)
Query: 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP 60
A + +A R F R L LL+ L ++ GK
Sbjct: 545 ADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTL 604
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWMAPKKRRL---PLLFFPASGE---VVSEPFGVVLI 114
+ E+ A ++ A + R+L +GE + GV +
Sbjct: 605 DDA-LSELR-------EAADFC-RYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVA 655
Query: 115 CSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IPLYLDCKAIKV 169
S WNFP+ + L + A+ AGN+V+ KP+E A IP A+ +
Sbjct: 656 ISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIP----KSALYL 711
Query: 170 TNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDT 225
G + L + FTGS V + A A + P+ E GG I D
Sbjct: 712 VTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIAD- 770
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK 285
+ + ++ F S GQ C + + V++ A +IE + ++ +P
Sbjct: 771 --ATALPEQVADDVVTSAFRSA-GQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPS 827
Query: 286 DSKS-ISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMT 344
D + + +I+ +RL + + G E F+ P I +A +T
Sbjct: 828 DVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAP-EGCFVAPHIFELT--EAGQLT 884
Query: 345 EEIFGPILPIIT--LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
EE+FGPIL ++ N++ + I L + ++ + + I+ G++ N
Sbjct: 885 EEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNR 944
Query: 403 TLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAI 440
++ + V PFGG G SG G + G + F+ E+ +
Sbjct: 945 NMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTV 983
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 5e-39
Identities = 74/455 (16%), Positives = 139/455 (30%), Gaps = 63/455 (13%)
Query: 26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW 85
+ + R + LR + L+ D I H + P EI + ++
Sbjct: 50 NNSKRASLLRTIASELEARSDDIIARAHLETAL-PEVRLTGEIARTANQLRLFADVVNSG 108
Query: 86 MAPKKRRLPLLFFPASG-----EVVSEPFGVVLICSAWNFPINLALEPLIG----AIAAG 136
+ A G V + A NFP LA G A+AAG
Sbjct: 109 SYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFP--LAFSAAGGDTASALAAG 166
Query: 137 NTVMLKPSELAVECASFLAETIPLYLDCKAIK-----------VTNGGVDVCEQLLQQKW 185
V++K + +AE I +A+K + + + L+
Sbjct: 167 CPVIVKGHTAHPGTSQIVAECI-----EQALKQEQLPQAIFTLLQGNQRALGQALVSHPE 221
Query: 186 -NKIFFTGSPRVGSIVMSAAAKHLTPVT--LELGGKCPAIL--DTLSSPLDIKVTVKRII 240
+ FTGS G + + A + P+ ELG P + + + +
Sbjct: 222 IKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAM---RAKADLADQFV 278
Query: 241 GGKFASCNGQVCVGVDYILV-EKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYH 298
C GQ C + IE+ ++ I+ + + ++ I + +
Sbjct: 279 ASMTMGC-GQFCTKPGVVFALNTPETQAFIETAQSLIR------QQSPSTLLTPGIRDSY 331
Query: 299 FERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPP---LDAEIMTEEIFGPILPII 355
++ D + + E+ + + + EEIFGP I+
Sbjct: 332 QSQVVSRGSDDGI--DVTFSQ---AESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIV 386
Query: 356 TLNNIQESIEFINSRPKPLAIYAFT--KDETFKKQIVSG--TSSGSLIFND--TLVQQLC 409
N+ + + L +D Q++ +G L+FN T V ++
Sbjct: 387 VCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGV-EVG 445
Query: 410 DVLPFGGVGQS---GIGRYHGHYSFETFSHEKAIM 441
+ GG + G + + A
Sbjct: 446 YAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 2e-34
Identities = 87/457 (19%), Positives = 145/457 (31%), Gaps = 77/457 (16%)
Query: 25 KSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDK 84
S R LRA+ + ++ + I + Q+ G P E G L +
Sbjct: 82 SSRKERAAFLRAIADEIEARAEAITEIGSQETGL-PEARLNGERG-------RTTGQL-R 132
Query: 85 WMAPKKRRLPLL----------FFPASG---EVVSEPFGVVLICSAWNFPINLALEPLIG 131
A + L PA +V P G V + A NFP LA G
Sbjct: 133 LFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFP--LAFSTAGG 190
Query: 132 ----AIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK-----------VTNGGVDV 176
A+AAG V++K +AE + AI+ + G DV
Sbjct: 191 DTAAALAAGCPVVVKGHSAHPGTGEIVAEAV-----DAAIRKTGVHPGVFSLIQGGSRDV 245
Query: 177 CEQLLQQKW-NKIFFTGSPRVGSIVMSAAAKHLTPV--TLELGGKCPAIL--DTLSSPLD 231
L+Q + FTGS G + A P+ ELG P L + L +
Sbjct: 246 GHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKA--R 303
Query: 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEK-----KFAATLIESLKTTIKKFYGENPKD 286
+ + G GQ C +V + +F +E+L
Sbjct: 304 AETLGQGWAGSLTMGA-GQFCTNPGIAVVIEGADADRFTTAAVEALAKV---------AP 353
Query: 287 SKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEE 346
++ I + + + + V ++ ++ L + EE
Sbjct: 354 QTMLTDGIAKAYRDGQARFATRNAVK-PLLATESSGRDASPNLFETTGAQFLADHALGEE 412
Query: 347 IFGPILPIITLNNIQESIEFINSRPKPLA--IYAFTKDETFKKQIVSG--TSSGSLIFND 402
+FGP+ ++ + + E E L I+ D +++ +G ++ N
Sbjct: 413 VFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNG 472
Query: 403 --TLVQQLCDVLPFGG-VGQSGIGRY--HGHYSFETF 434
T V ++ D + GG S G S F
Sbjct: 473 FPTGV-EVVDSMVHGGPYPASTNFGATSVGTMSIRRF 508
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 3e-33
Identities = 58/372 (15%), Positives = 125/372 (33%), Gaps = 37/372 (9%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E+ + + + + S ++A+ + +K+ K H++ G + D
Sbjct: 13 EVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ---D 69
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFP 121
++ ++K+ + + + + + V+ P GVV P
Sbjct: 70 KVIKNVFASKHVYNYI--------KDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNP 121
Query: 122 INLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD-CKAIK-----VTNGGVD 175
+ + + +I AGN+++ P A++ I + K +T +
Sbjct: 122 TSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQ 181
Query: 176 VCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234
+QL++ I TG + AA TP G PA ++ + +I
Sbjct: 182 GTDQLMKHKDTAVILATGGSAMV----KAAYSSGTPAIGVGPGNGPAFIERSA---NIPR 234
Query: 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRII 294
VK I+ K NG +C ++VE+ +I + + + ++ + + I
Sbjct: 235 AVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGA--HFLSDAEAVQLGKFI 291
Query: 295 NEYHFERLRKLL-KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP 353
+ ++ K + + + I + + E PIL
Sbjct: 292 LRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGA---KIPYSREKLAPILA 348
Query: 354 IITLNNIQESIE 365
T QE+ E
Sbjct: 349 FYTAETWQEACE 360
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-33
Identities = 56/382 (14%), Positives = 119/382 (31%), Gaps = 57/382 (14%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E++ +A +++ T S RA + + ++ G VE
Sbjct: 8 ELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVED--- 64
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEV----------VSEPFGVVLICS 116
K K + + K + G + ++EP G++
Sbjct: 65 ------KVIKNHFASEFIYNKYKDEQTC-------GILEEDDNLGTMTIAEPVGIICGIV 111
Query: 117 AWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK-------- 168
P + A+ + ++ N ++ P A + A+ + A
Sbjct: 112 PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV-----LDAAVAAGAPKDI 166
Query: 169 ---VTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILD 224
+ V++ L++ I TG P + AA P G P ++D
Sbjct: 167 IGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVID 222
Query: 225 TLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP 284
+ DIK V ++ K NG VC ++V + + E + +
Sbjct: 223 ETA---DIKRAVASVLMSKTFD-NGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTD 278
Query: 285 KDSKSISRIINEYHFERLRKLLKDPL-VADAIVHGGLLDKENLFIEPTILLDPPLDAEIM 343
D +I+ ++ + + +A+ G + + + L D +
Sbjct: 279 ADKVRKVLLIDGALNAKI--VGQPATAIAEMA--GVKVPADTKVLIGEGLGKVSYD-DAF 333
Query: 344 TEEIFGPILPIITLNNIQESIE 365
E P L + +N ++++
Sbjct: 334 AHEKLSPTLGMFRADNFEDAVA 355
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 3e-27
Identities = 82/313 (26%), Positives = 130/313 (41%), Gaps = 48/313 (15%)
Query: 107 EPFGVVLICSAWNFP--INLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC 164
P GVV + +NFP + + P+ AIA GNT +LKPSE L E L+
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPM--AIALGNTFILKPSERTPLLTEKLVE---LFEKA 194
Query: 165 KA----IKVTNGGVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKC 219
V G DV +L+ K I F GS VG V +++L V G K
Sbjct: 195 GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKN 254
Query: 220 PAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIK 277
I+ D +++ TV I+G F S G+ C+ + VE+ A + L+ +
Sbjct: 255 HTIVLNDA-----NLEDTVTNIVGAAFGSA-GERCMACAVVTVEEGIADEFMAKLQEKVA 308
Query: 278 KF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGG--LLD-----KEN-LFI 328
G D + +I E + +R + + G + D ++ F+
Sbjct: 309 DIKIGNGLDDGVFLGPVIREDNKKRTLSY-----IEKGLEEGARLVCDGRENVSDDGYFV 363
Query: 329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA-----FTKD- 382
PTI + + I +EIF P+L +I + N++E+IE N +A FT +
Sbjct: 364 GPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSE-----FANGACLFTSNS 418
Query: 383 ---ETFKKQIVSG 392
F++ I +G
Sbjct: 419 NAIRYFRENIDAG 431
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 77/348 (22%), Positives = 129/348 (37%), Gaps = 54/348 (15%)
Query: 110 GVVLICSAWNFP---INLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IP-- 159
G V S +NF NLA P GN V+ KPS+ A+ + + +P
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPA----LMGNVVLWKPSDTAMLASYAVYRILREAGLPPN 257
Query: 160 -LYLDCKAIKVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAA------KHLTPV 211
+ V G + + + I FTGS + A + +
Sbjct: 258 IIQF------VPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRL 311
Query: 212 TLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIES 271
E GGK + S D+ V + F GQ C + V K +
Sbjct: 312 AGECGGKNFHFVH---SSADVDSVVSGTLRSAFEYG-GQKCSACSRLYVPKSLWPQIKGR 367
Query: 272 LKTTIKKF-YGENPKDSKS-ISRIINEYHFERLRKLL----KDPLVADAIVHGGLLDKEN 325
L + G+ +D + S +I+ F R++K L P ++ I+ GG ++
Sbjct: 368 LLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLS--ILAGGQCNESV 425
Query: 326 -LFIEPTILLDPPLDAEIMTEEIFGPILPIITL--NNIQESIEFINSRPKPLAIYA---- 378
++EP I+ IM EEIFGP+L + + +E+++ ++S Y
Sbjct: 426 GYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDST----TSYGLTGA 481
Query: 379 -FTKDETFKKQIVS--GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG 423
F +D+ ++ ++G+ ND + PFGG SG
Sbjct: 482 VFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTN 529
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 8e-26
Identities = 71/317 (22%), Positives = 121/317 (38%), Gaps = 52/317 (16%)
Query: 107 EPFGVVLICSAWNFP--INLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC 164
+P G+ + +NFP I + + AIA GN +LKPSE LAE L ++
Sbjct: 161 QPVGIGAGITPFNFPGMIPMWMFAP--AIACGNAFILKPSERDPSVPIRLAE---LMIEA 215
Query: 165 KA----IKVTNGGVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKC 219
+ V NG + +L + F GS + V AA + G K
Sbjct: 216 GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKN 275
Query: 220 PAIL--DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVD-YILVEKKFAATLIESLKTTI 276
I+ D D+ +IG + S G+ C+ + + V ++ A LI+ L +
Sbjct: 276 HMIIMPDA-----DLDQAANALIGAGYGSA-GERCMAISVAVPVGEETANRLIDKLVPMV 329
Query: 277 KKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGG--LLDKENL------- 326
+ G + + ++ + +R+R L + I G ++D +
Sbjct: 330 ESLRIGPYTDEKADMGPVVTKEAEQRIRSL-----IDSGIEQGAKLVVDGRDFKLQGYEN 384
Query: 327 --FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA-----F 379
FI + D D +I EIFGP+L ++ N +E++ Y +
Sbjct: 385 GHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHE-----YGNGVAIY 439
Query: 380 TKD----ETFKKQIVSG 392
T+D F +I G
Sbjct: 440 TRDGDAARDFASRINIG 456
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 72/527 (13%), Positives = 124/527 (23%), Gaps = 203/527 (38%)
Query: 10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIG 69
D+L Q F K R L + L + + LG G
Sbjct: 117 DRLYNDNQVF----AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG----------SG 162
Query: 70 LIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA---- 125
K+ CL ++ F + W +NL
Sbjct: 163 ---KTWVALDVCLSY-------KVQCKM----------DFKI-----FW---LNLKNCNS 194
Query: 126 ----LEPL-----------IGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC------ 164
LE L + + L+ + E L Y +C
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS--KPYENCLLVLLN 252
Query: 165 ----KAIKVTNGGVDVCEQLLQQKWNKIF-FTGSPRVGSIVMSAAAKHLTPV-TLELGGK 218
KA N C+ LL ++ ++ F + I + + LTP L K
Sbjct: 253 VQNAKAWNAFNLS---CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 219 C---------PAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLI 269
+L T +P + II D + +
Sbjct: 310 YLDCRPQDLPREVLTT--NPRRLS-----IIAESIR----------DGLATWDNWKHVNC 352
Query: 270 ESLKTTIKKFYGE-NPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFI 328
+ L T I+ P + + F+RL ++ F
Sbjct: 353 DKLTTIIESSLNVLEPAEYRK--------MFDRL-----------SV-----------F- 381
Query: 329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388
P A I T +L +I + I+ + + ++ K
Sbjct: 382 --------PPSAHIPTI-----LLSLIWFDVIKSDVMVV-------------VNKLHKY- 414
Query: 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHY-------SFETFSHEKAIM 441
SL+ + Y E H +
Sbjct: 415 --------SLVEKQ---------------PKESTISIPSIYLELKVKLENEYALHRSIVD 451
Query: 442 QRSFFLELEPRY--PPWND--------FKMKFLRLAYDFDYFNLLLL 478
+ + PP+ D +K + F ++ L
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 7e-04
Identities = 44/270 (16%), Positives = 77/270 (28%), Gaps = 85/270 (31%)
Query: 256 DYILV-EKKFAATL-----IESLKTTIKKFYGENPKDSKSISRIINEYH-FERLRKLLKD 308
D + V E F + K+ + K + I II +L
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSILSK---------EEIDHIIMSKDAVSGTLRLF-- 68
Query: 309 PLVADAIVHGGLLDKEN----LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI 364
LL K+ F+E + ++ + E P + +
Sbjct: 69 ---------WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM---------TR 110
Query: 365 EFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGV---GQSG 421
+I R + + ++ F K VS L Q L ++ P V G G
Sbjct: 111 MYIEQRDR-----LYNDNQVFAKYNVS---RLQPY--LKLRQALLELRPAKNVLIDGVLG 160
Query: 422 IG------------RYHGHYSFETF--------SHEKAI-MQRSFFLELEPRYP------ 454
G + F+ F S E + M + +++P +
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220
Query: 455 -----PWNDFKMKFLRLAYDFDYFNLLLLL 479
+ + + RL Y N LL+L
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.13 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 96.57 |
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-100 Score=797.37 Aligned_cols=451 Identities=42% Similarity=0.728 Sum_probs=417.5
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
.+.+|+++|+++|++||++|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..+...++++++.+
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999997679999999999999999
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcccc
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~al 162 (484)
..|..+..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al 174 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhC
Confidence 88876543322222234467889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617 163 DCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242 (484)
Q Consensus 163 p~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~ 242 (484)
|+|++|+++|+.+.+..|+.|+||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.++++
T Consensus 175 P~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~---dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 175 DKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDK---NCDLDVACRRIAWG 251 (469)
T ss_dssp CTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECT---TSCHHHHHHHHHHH
T ss_pred CcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECC---CCCHHHHHHHHHHH
Confidence 999999999987778889888999999999999999999999999999999999999999999 99999999999999
Q ss_pred hcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321 (484)
Q Consensus 243 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~ 321 (484)
+|. |+||.|++++|||||+++||+|+++|+++++++. |+| ++++++||++++.+++++.+++ +++++++||..
T Consensus 252 ~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KFM-NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG 325 (469)
T ss_dssp HHG-GGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred HHh-cCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence 999 9999999999999999999999999999999986 555 8899999999999999999999 37899999987
Q ss_pred CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401 (484)
Q Consensus 322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 401 (484)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN 405 (469)
T 3sza_A 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405 (469)
T ss_dssp ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence 66899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCC--CCCCCCCCchHHHH
Q 038617 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLE--LEPRYPPWNDFKMK 462 (484)
Q Consensus 402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 462 (484)
+...+...+.+||||+|.||+|+++|.+|+++||+.|+|+.+..+.+ .+++||||+++|.+
T Consensus 406 ~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 406 DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp CSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 98765567899999999999999999999999999999999887755 67999999987765
|
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-100 Score=794.29 Aligned_cols=433 Identities=24% Similarity=0.333 Sum_probs=405.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|+++|.++|++++++|++++++|++++++|+|||+.+++..|+..+++.+++++..
T Consensus 40 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~ 119 (490)
T 2wme_A 40 RASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGL 119 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999999999999999999999999999999866799999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++..... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+|+..|++++.++
T Consensus 120 ~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~ea 195 (490)
T 2wme_A 120 VPAIEGEQI----PLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA 195 (490)
T ss_dssp GGGCCEEEE----EEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cccccCccc----cccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHh
Confidence 766533221 1123446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHH-HHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMS-AAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~-~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+|+|++|+|+| +.++++.|++|| ||+|+||||+.+|+++.+ .+++++||+++|||||||+||++ |||++.|++
T Consensus 196 GlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~---dAdl~~A~~ 272 (490)
T 2wme_A 196 GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFP---DADLDRAAD 272 (490)
T ss_dssp TCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECT---TSCHHHHHH
T ss_pred CCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEcc---CccHHHHHH
Confidence 99999999999 568999999998 999999999999998876 55678999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~ 315 (484)
.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++. +|+++
T Consensus 273 ~~~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v 351 (490)
T 2wme_A 273 IAVMANFF-SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARL 351 (490)
T ss_dssp HHHHHHHG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhc-cCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEE
Confidence 99999999 99999999999999999999999999999999999999 89999999999999999999999987 47899
Q ss_pred eeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 316 VHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 316 ~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 352 ~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~ 431 (490)
T 2wme_A 352 LCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAI 431 (490)
T ss_dssp EECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred EECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHH
Confidence 9999753 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 432 ~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 432 HRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 999999999997654 4678999999999999999999999999999999875
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-97 Score=774.90 Aligned_cols=437 Identities=27% Similarity=0.411 Sum_probs=409.3
Q ss_pred CCCHHHHHHHHHHHHHHhH-----hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR-----SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAK 76 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~ 76 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++
T Consensus 41 ~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~ 119 (503)
T 3iwj_A 41 AATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFE 119 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHH
Confidence 4789999999999999999 999999999999999999999999999999999999999999975 9999999999
Q ss_pred HHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 77 YALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
+++...+++.+...........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++
T Consensus 120 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 199 (503)
T 3iwj_A 120 YYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGE 199 (503)
T ss_dssp HHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHH
Confidence 99999888765432111111123467889999999999999999999999999999999999999999999999999999
Q ss_pred Hhccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617 157 TIPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233 (484)
Q Consensus 157 ~l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~ 233 (484)
++.++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++
T Consensus 200 l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~---dADl~ 276 (503)
T 3iwj_A 200 ICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFE---DVDLD 276 (503)
T ss_dssp HHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECS---SSCHH
T ss_pred HHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcC---CCCHH
Confidence 99999 99999999999 457899999997 99999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV- 311 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~- 311 (484)
.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+
T Consensus 277 ~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 355 (503)
T 3iwj_A 277 KAAEWAIFGCFW-TNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSE 355 (503)
T ss_dssp HHHHHHHHHHTG-GGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-cCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHC
Confidence 999999999999 99999999999999999999999999999999999999 889999999999999999999999874
Q ss_pred CCceeeCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 312 ADAIVHGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 312 ~~~~~~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 356 Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 435 (503)
T 3iwj_A 356 GATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCER 435 (503)
T ss_dssp TCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHH
T ss_pred CCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHH
Confidence 78999999764 479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
+++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 436 ~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~ 490 (503)
T 3iwj_A 436 VTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYIS 490 (503)
T ss_dssp HHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECC
T ss_pred HHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCC
Confidence 99999999999998653 46889999999999999999999999999999988753
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-97 Score=770.75 Aligned_cols=433 Identities=22% Similarity=0.339 Sum_probs=409.2
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 22 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 100 (484)
T 3ros_A 22 NPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADH 100 (484)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.++.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.|+..|++++.++
T Consensus 101 ~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 176 (484)
T 3ros_A 101 GPEMLKPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRA 176 (484)
T ss_dssp HHHHTSCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 99887654321 13457789999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+. +.++ |++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 177 GlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~---dADl~~Aa~~ 252 (484)
T 3ros_A 177 GAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD---DADPQVLRNV 252 (484)
T ss_dssp TCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT---TCCHHHHHHH
T ss_pred CcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC---CCCHHHHHHH
Confidence 9999999999965 4566 99997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 253 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~ 331 (484)
T 3ros_A 253 LNDARTY-NDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVF 331 (484)
T ss_dssp HTTTTTG-GGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhc-CCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 68999
Q ss_pred eCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 332 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~a 411 (484)
T 3ros_A 332 YQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIET 411 (484)
T ss_dssp EECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCS
T ss_pred ecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCcc
Confidence 99975 35799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCc
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFF 446 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 446 (484)
|+|+||+... ..+.+||||+|.||+|+++|++|+++|++.|+|+++...
T Consensus 412 G~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~ 460 (484)
T 3ros_A 412 GMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKN 460 (484)
T ss_dssp SCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGGG
T ss_pred ceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCCC
Confidence 9999999654 578899999999999999999999999999999887543
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-97 Score=773.56 Aligned_cols=433 Identities=24% Similarity=0.359 Sum_probs=406.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..+++.+++++..
T Consensus 58 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~ 137 (498)
T 4f3x_A 58 EASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGA 137 (498)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999446999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++..... +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 138 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea 214 (498)
T 4f3x_A 138 VRNLHAPAA---GEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI 214 (498)
T ss_dssp TTCCEEECB---EEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred HHHhcCccc---cCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh
Confidence 876533211 11123456788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 215 lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~---dADl~~Aa~~i 291 (498)
T 4f3x_A 215 LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYG---DADLEAVVNGI 291 (498)
T ss_dssp SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECC---CCCHHHHHHHH
Confidence 99999999999 567999999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC-cee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD-AIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~-~~~ 316 (484)
++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+ +++
T Consensus 292 ~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~ 370 (498)
T 4f3x_A 292 RTFGYY-NAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEIT 370 (498)
T ss_dssp HHHTTG-GGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred HHHHHh-cCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999874 67 899
Q ss_pred eCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 371 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~a 450 (498)
T 4f3x_A 371 TGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQY 450 (498)
T ss_dssp ECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCS
T ss_pred ECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 99975 34799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+++.+ .+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 451 G~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 451 GCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp SEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred ceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999998764 48899999999999999999999999999999875
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-96 Score=771.46 Aligned_cols=433 Identities=24% Similarity=0.352 Sum_probs=407.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 123 (506)
T 3rh9_A 45 SMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKH 123 (506)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEe-ecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVS-EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
.+++.+... +. ..+...++++ +|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.+
T Consensus 124 ~~~~~~~~~---~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e 199 (506)
T 3rh9_A 124 ISALDSHTI---PE-KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDK 199 (506)
T ss_dssp GGGGCCEEC---SC-CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTT
T ss_pred HHHhcCccc---cc-CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHH
Confidence 988754321 11 1344667888 999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++
T Consensus 200 aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~---dADl~~Aa~ 276 (506)
T 3rh9_A 200 LDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFD---DADLEAAAD 276 (506)
T ss_dssp TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECT---TSCHHHHHH
T ss_pred hCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECC---CCCHHHHHH
Confidence 9 99999999999 567899999998 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |+++
T Consensus 277 ~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v 355 (506)
T 3rh9_A 277 NLIANKFR-GGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASL 355 (506)
T ss_dssp HHHHHHHG-GGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHH-hCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 899999999999999999999999874 6799
Q ss_pred eeCCCc-CC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 316 VHGGLL-DK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 316 ~~gg~~-~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 356 ~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l 435 (506)
T 3rh9_A 356 VAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGL 435 (506)
T ss_dssp EESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHC
T ss_pred EecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999975 33 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
++|+|+||+++. ..+.+||||+|.||+|+++|++|+++|++.|+|+++..
T Consensus 436 ~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 436 RFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp CCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred CcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 999999999875 35789999999999999999999999999999988753
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-97 Score=771.75 Aligned_cols=432 Identities=25% Similarity=0.372 Sum_probs=404.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~ 124 (484)
T 3ifg_A 46 KMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEE 124 (484)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999974 999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.... .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 125 ~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 201 (484)
T 3ifg_A 125 GKRVAGDT---LPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERA 201 (484)
T ss_dssp HTTCCEEE---ECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHhhcCcc---ccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 76543221 111112446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 202 GlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~---dADl~~Aa~~ 278 (484)
T 3ifg_A 202 GVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFD---DADLDAAVEG 278 (484)
T ss_dssp TCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred CCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999 467899999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 279 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 357 (484)
T 3ifg_A 279 AIASKYR-NNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLM 357 (484)
T ss_dssp HHHHHHG-GGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHh-cCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 68999
Q ss_pred eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 358 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~a 437 (484)
T 3ifg_A 358 TGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEY 437 (484)
T ss_dssp ECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCC
T ss_pred ECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999763 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 438 G~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 438 GMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp SEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred ceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999998643 468899999999999999999999999999998753
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-96 Score=771.18 Aligned_cols=433 Identities=25% Similarity=0.383 Sum_probs=407.9
Q ss_pred CCCHHHHHHHHHHHHHHh--HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTF--RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++|| +.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a 144 (520)
T 3ed6_A 66 EGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFA 144 (520)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHH
Confidence 478999999999999999 8999999999999999999999999999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+++.+.. . +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.
T Consensus 145 ~~~~~~~g~~-~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~ 221 (520)
T 3ed6_A 145 GLADKDGGEM-I--DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221 (520)
T ss_dssp HHTTSCCEEE-E--CCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHhcCee-c--ccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHH
Confidence 8887654321 1 111124467889999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++| +.++++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|+
T Consensus 222 eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~---dADl~~Aa 298 (520)
T 3ed6_A 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFD---DADFELAV 298 (520)
T ss_dssp HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSCHHHHH
T ss_pred HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECC---CCCHHHHH
Confidence 99 99999999999 678999999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++
T Consensus 299 ~~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 377 (520)
T 3ed6_A 299 DQALNGGYF-HAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGAT 377 (520)
T ss_dssp HHHHHHHHG-GGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHh-cCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCE
Confidence 999999999 99999999999999999999999999999999999999 899999999999999999999999874 679
Q ss_pred eeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 315 IVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 315 ~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 378 v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 457 (520)
T 3ed6_A 378 IAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRV 457 (520)
T ss_dssp EEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHH
T ss_pred EEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 99999764 4699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++|+|+||+...+ .+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 458 a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 458 ANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred HHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 99999999999998764 688999999999999999999999999999998875
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-96 Score=771.97 Aligned_cols=432 Identities=25% Similarity=0.384 Sum_probs=405.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.+++++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~ 144 (504)
T 3ek1_A 66 SLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEE 144 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999975 999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.... .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 145 ~~~~~g~~---~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~ea 221 (504)
T 3ek1_A 145 AKRVYGDT---IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKA 221 (504)
T ss_dssp HTTCCEEE---ECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred HHHhcCcc---cccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 76543221 111112346788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 222 GlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~---dADl~~Aa~~ 298 (504)
T 3ek1_A 222 GIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFD---DADLDAAVDG 298 (504)
T ss_dssp TCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECT---TSCHHHHHHH
T ss_pred CCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcC---CCCHHHHHHH
Confidence 99999999998 567899999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 299 i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 377 (504)
T 3ek1_A 299 AMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLI 377 (504)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHh-cCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 78999
Q ss_pred eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
+||.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 378 ~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG 456 (504)
T 3ek1_A 378 TGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYG 456 (504)
T ss_dssp ECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCS
T ss_pred eCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcC
Confidence 99975 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 457 ~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 457 MVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp EEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred eEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 999998763 4688999999999999999999999999999998764
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-96 Score=766.31 Aligned_cols=433 Identities=23% Similarity=0.357 Sum_probs=405.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 56 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~ 135 (495)
T 1wnd_A 56 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA 135 (495)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999744999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+.. . +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 136 ~~~~~g~~-~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea 212 (495)
T 1wnd_A 136 ARCLNGLA-A--GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI 212 (495)
T ss_dssp TTCCEEEC-B--EEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT
T ss_pred HHHhcCcc-c--cCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh
Confidence 87764321 1 11112335688999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 213 lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~---dADl~~Aa~~i 289 (495)
T 1wnd_A 213 FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFD---DADIEAVVEGV 289 (495)
T ss_dssp SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECT---TSCHHHHHHHH
T ss_pred CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECC---cCCHHHHHHHH
Confidence 99999999999 678899999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C-Ccee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A-DAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~-~~~~ 316 (484)
++++|. |+||.|++++|||||++++|+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ | ++++
T Consensus 290 ~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~ 368 (495)
T 1wnd_A 290 RTFGYY-NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVI 368 (495)
T ss_dssp HHHTTG-GGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEE
T ss_pred HHHHHh-cCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999864 6 7899
Q ss_pred eCCC-cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGL-LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~-~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 369 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 448 (495)
T 1wnd_A 369 TGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQY 448 (495)
T ss_dssp ECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCS
T ss_pred ECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCc
Confidence 9997 544699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 449 G~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 449 GCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp SEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred ceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999998654 468899999999999999999999999999998764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-95 Score=757.23 Aligned_cols=432 Identities=37% Similarity=0.642 Sum_probs=405.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.++++++.
T Consensus 24 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 103 (457)
T 3lns_A 24 YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH 103 (457)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999866999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+++|.+++.........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 183 (457)
T 3lns_A 104 LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA 183 (457)
T ss_dssp HHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 99987654332222223456788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHH
Q 038617 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241 (484)
Q Consensus 162 lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~ 241 (484)
+|+|++|+++|+.+.+++|++++||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+++
T Consensus 184 lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~---dADl~~Aa~~i~~ 260 (457)
T 3lns_A 184 FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLP---DADLDQTVNQLMF 260 (457)
T ss_dssp CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECT---TCCHHHHHHHHHH
T ss_pred CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECC---CCCHHHHHHHHHH
Confidence 9999999999988899999986699999999999999999999999999999999999999999 9999999999999
Q ss_pred hhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321 (484)
Q Consensus 242 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~ 321 (484)
++|. |+||.|++++|||||+++||+|+++|++++++++ |.+. ++||++++.+++++.++++++ ++++++||..
T Consensus 261 ~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~~~~~gg~~ 333 (457)
T 3lns_A 261 GKFI-NSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QGQVLVGSQA 333 (457)
T ss_dssp HHHG-GGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CSEEEECCCE
T ss_pred HHHH-hCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CCeEEeCCcc
Confidence 9999 9999999999999999999999999999999987 5333 999999999999999999986 4689999976
Q ss_pred CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHhhccceeeEEE
Q 038617 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS-RPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400 (484)
Q Consensus 322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 400 (484)
+.+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+|
T Consensus 334 ~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~v 413 (457)
T 3lns_A 334 DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQV 413 (457)
T ss_dssp EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEE
T ss_pred CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEE
Confidence 667999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 401 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+++.+...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 414 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 414 NGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp SCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred cCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9987655678999999999999999999999999999999764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-96 Score=769.59 Aligned_cols=435 Identities=23% Similarity=0.329 Sum_probs=405.5
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++
T Consensus 70 ~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a 149 (517)
T 2o2p_A 70 LAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFA 149 (517)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999 99999999999999999999999999999999999999999997459999999999999
Q ss_pred HHHHHhhcCccccCcc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 80 SCLDKWMAPKKRRLPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
...+++.+.. ..... .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++
T Consensus 150 ~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~ 228 (517)
T 2o2p_A 150 GWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELT 228 (517)
T ss_dssp HHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHH
Confidence 9887765432 11110 011224688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|||||||+||++ |||++.
T Consensus 229 ~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~---dADl~~ 305 (517)
T 2o2p_A 229 LKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA---DCDLNK 305 (517)
T ss_dssp HHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT---TSCHHH
T ss_pred HHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC---CCCHHH
Confidence 999 99999999999 557899999997 999999999999999999999 99999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |
T Consensus 306 Aa~~i~~~~f~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G 384 (517)
T 2o2p_A 306 AVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEG 384 (517)
T ss_dssp HHHHHHHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-cCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 313 DAIVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 313 ~~~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++
T Consensus 385 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 464 (517)
T 2o2p_A 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYV 464 (517)
T ss_dssp CEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHH
T ss_pred CEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHH
Confidence 89999997643 699999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 465 ~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 465 SDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 9999999999998754 467899999999999999999999999999999764
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-95 Score=768.84 Aligned_cols=434 Identities=27% Similarity=0.376 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHHHHHh--HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTF--RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++|| ..|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++
T Consensus 57 ~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a 135 (528)
T 3u4j_A 57 EASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAA 135 (528)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHH
Confidence 478999999999999999 789999999999999999999999999999999999999999994 69999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
+.++++.... . +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.
T Consensus 136 ~~~~~~~~~~-~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ 212 (528)
T 3u4j_A 136 GQARALEGQT-H--NNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAR 212 (528)
T ss_dssp HHHTTCCEEE-E--CCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHhcCee-e--ccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHH
Confidence 9988764321 1 111134467889999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|+
T Consensus 213 eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~---dADl~~Aa 289 (528)
T 3u4j_A 213 EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFA---DADLDAAA 289 (528)
T ss_dssp HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECT---TSCHHHHH
T ss_pred HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECC---CCCHHHHH
Confidence 99 99999999999 678999999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus 290 ~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 368 (528)
T 3u4j_A 290 DGIAYGVYH-NAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAE 368 (528)
T ss_dssp HHHHHHHHG-GGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhh-cCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999874 679
Q ss_pred eeeCCCcCC--CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 315 IVHGGLLDK--ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 315 ~~~gg~~~~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 369 v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~ 448 (528)
T 3u4j_A 369 LLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRR 448 (528)
T ss_dssp EEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHH
T ss_pred EEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHh
Confidence 999997643 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 449 l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 449 IRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp SCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred CCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 9999999999765 47889999999999999999999999999999988753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-95 Score=770.23 Aligned_cols=435 Identities=23% Similarity=0.324 Sum_probs=407.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 70 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~ 148 (538)
T 3qan_A 70 KANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQ 148 (538)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999986 999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+..+..++.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 149 ~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~ea 225 (538)
T 3qan_A 149 MIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDA 225 (538)
T ss_dssp HHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHT
T ss_pred HHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHh
Confidence 555555443221 12456788999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc------cCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH------LTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~------~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++++ +||+++|||||||+||++ |||+
T Consensus 226 GlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~---dADl 302 (538)
T 3qan_A 226 GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDR---DADL 302 (538)
T ss_dssp TCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECT---TSCH
T ss_pred CCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECC---CCCH
Confidence 99999999999 667899999997 99999999999999999999988 999999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+
T Consensus 303 ~~Aa~~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 381 (538)
T 3qan_A 303 DLAAESILVSAFG-FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKK 381 (538)
T ss_dssp HHHHHHHHHHHHG-GGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999 899999999999999999999999875
Q ss_pred CCceeeCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 312 ADAIVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 312 ~~~~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
.+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 382 ~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 461 (538)
T 3qan_A 382 EGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAK 461 (538)
T ss_dssp HSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred CCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 349999997643 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|+.+.
T Consensus 462 ~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 462 REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp HHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 999999999995443334789999999999999 999999999999999998875
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-95 Score=761.41 Aligned_cols=428 Identities=24% Similarity=0.368 Sum_probs=400.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.+++++|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 138 (497)
T 3i44_A 59 LGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKA 138 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999855999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEE-eecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVV-SEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
+..+..+... ..+...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 139 ~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e 213 (497)
T 3i44_A 139 YKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDE 213 (497)
T ss_dssp HHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred hhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHH
Confidence 7765332110 113446777 9999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ ||| +.|++
T Consensus 214 aGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~---dAD-~~Aa~ 289 (497)
T 3i44_A 214 AALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA---DAD-IDALQ 289 (497)
T ss_dssp TTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSC-TTHHH
T ss_pred hCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECC---Chh-HHHHH
Confidence 9 99999999999 668999999998 99999999999999999999999999999999999999999 999 99999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |+++
T Consensus 290 ~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v 368 (497)
T 3i44_A 290 RGVRHCFY-NSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATL 368 (497)
T ss_dssp HHHHHHHG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHh-cCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999864 7899
Q ss_pred eeCCC-cC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 316 VHGGL-LD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 316 ~~gg~-~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
++||. .+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 369 ~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~ 448 (497)
T 3i44_A 369 VTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAA 448 (497)
T ss_dssp EECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHH
T ss_pred EECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 99994 33 269999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
++++|+|+||. . ...+.+||||+|.||+|+++|.+|+++|++.|+|+.
T Consensus 449 ~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 449 QVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp HSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred hCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence 99999999994 2 246789999999999999999999999999999853
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-95 Score=764.66 Aligned_cols=433 Identities=23% Similarity=0.352 Sum_probs=406.5
Q ss_pred CCCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 1 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
+.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.
T Consensus 53 ~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~ 131 (503)
T 1a4s_A 53 VPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAG 131 (503)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999996 499999999999999
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
..+++.+. ..... .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.+
T Consensus 132 ~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~ 207 (503)
T 1a4s_A 132 LAPTLSGQ-HIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHE 207 (503)
T ss_dssp HGGGCCEE-EEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHhcCC-cccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 88876542 11111 234568899999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 161 Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 161 a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 208 aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~---dADl~~Aa~~ 284 (503)
T 1a4s_A 208 AGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFK---DCELENAVRG 284 (503)
T ss_dssp TTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred hCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECC---CCCHHHHHHH
Confidence 9 99999999999338899999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |++++
T Consensus 285 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~ 363 (503)
T 1a4s_A 285 ALMANFL-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVL 363 (503)
T ss_dssp HHHTTCG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHh-cCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999864 77999
Q ss_pred eCCCcC-------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 317 HGGLLD-------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 317 ~gg~~~-------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 364 ~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 443 (503)
T 1a4s_A 364 CGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRV 443 (503)
T ss_dssp ECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHH
T ss_pred eCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 999754 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 444 ~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 444 AANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 9999999999998765 4678999999999999999999999999999998764
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-95 Score=763.98 Aligned_cols=432 Identities=26% Similarity=0.364 Sum_probs=406.5
Q ss_pred CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA 78 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 78 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++
T Consensus 54 ~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~ 133 (501)
T 1bxs_A 54 EGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYC 133 (501)
T ss_dssp CCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999 8999999999999999999999999999999999999999988667999999999999
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
++.++++.+... .. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++
T Consensus 134 a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~ 209 (501)
T 1bxs_A 134 AGWADKIQGRTI-PM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLI 209 (501)
T ss_dssp HHHGGGCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHhhCCee-ec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHH
Confidence 999888755321 11 22335688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++ |||++.
T Consensus 210 ~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~---dADl~~ 286 (501)
T 1bxs_A 210 KEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA---DADLDN 286 (501)
T ss_dssp HHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT---TSCHHH
T ss_pred HHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC---CCCHHH
Confidence 999 99999999999 678899999998 999999999999999999999 99999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |
T Consensus 287 Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 365 (501)
T 1bxs_A 287 AVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 365 (501)
T ss_dssp HHHHHHHHHHT-TTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-cCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 366 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 445 (501)
T 1bxs_A 366 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSS 445 (501)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHH
Confidence 7899998753 369999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 446 ~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 446 ALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred hcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999998754 357899999999999999999999999999999876
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-96 Score=766.76 Aligned_cols=433 Identities=24% Similarity=0.351 Sum_probs=406.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~ 124 (497)
T 3k2w_A 46 AGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDN 124 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 4999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+... +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 125 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~a 201 (497)
T 3k2w_A 125 ALTIEGDIL---PSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEA 201 (497)
T ss_dssp TTTCCEEEE---ECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHT
T ss_pred HHHhcCccc---ccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 877654321 11123446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 202 GlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~---dADl~~Aa~~ 278 (497)
T 3k2w_A 202 GLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMD---DADLDKAAED 278 (497)
T ss_dssp TCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECT---TCCHHHHHHH
T ss_pred CcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcC---CCCHHHHHHH
Confidence 99999999999 668999999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus 279 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 357 (497)
T 3k2w_A 279 ALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVA 357 (497)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEE
T ss_pred HHHHHHh-CCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999864 78999
Q ss_pred eCCCc--C-C--CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLL--D-K--ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~--~-~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||.. . . +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 358 ~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 437 (497)
T 3k2w_A 358 TGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAIS 437 (497)
T ss_dssp ECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHH
T ss_pred ecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHH
Confidence 99973 2 2 68999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||+++.+ .+.+||||+|.||+|+++|++|+++|++.|+|+.+.
T Consensus 438 ~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 438 DLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred hCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999998764 588999999999999999999999999999998875
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-96 Score=765.11 Aligned_cols=432 Identities=24% Similarity=0.353 Sum_probs=406.4
Q ss_pred CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA 78 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 78 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++
T Consensus 53 ~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 132 (500)
T 1o04_A 53 EGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132 (500)
T ss_dssp CBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999 8999999999999999999999999999999999999999988666999999999999
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
++.++++.++.. . . ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++
T Consensus 133 a~~~~~~~g~~~-~--~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~ 208 (500)
T 1o04_A 133 AGWADKYHGKTI-P--I-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLI 208 (500)
T ss_dssp HHHTTTCCEEEE-C--C-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHHHhhCcce-e--c-CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHH
Confidence 998887754321 1 1 12335688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++ |||++.
T Consensus 209 ~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~---dADl~~ 285 (500)
T 1o04_A 209 KEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS---DADMDW 285 (500)
T ss_dssp HHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT---TSCHHH
T ss_pred HHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC---CCCHHH
Confidence 999 99999999999 678899999998 999999999999999999999 99999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |
T Consensus 286 Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 364 (500)
T 1o04_A 286 AVEQAHFALFF-NQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEG 364 (500)
T ss_dssp HHHHHHHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhc-cCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 365 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 444 (500)
T 1o04_A 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQ 444 (500)
T ss_dssp CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHH
Confidence 7899999764 369999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 445 ~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 445 ALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp HCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred hCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 99999999998764 357899999999999999999999999999999876
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-96 Score=768.52 Aligned_cols=433 Identities=27% Similarity=0.331 Sum_probs=404.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++ |+..+++.+++++..
T Consensus 48 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~ 124 (517)
T 3r31_A 48 AATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFF 124 (517)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999988 999999999999988
Q ss_pred HHH---hhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 82 LDK---WMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 82 ~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
.+. +..+..... ..+. .+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++
T Consensus 125 ~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll 200 (517)
T 3r31_A 125 GGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEIL 200 (517)
T ss_dssp HHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHH
T ss_pred hhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHH
Confidence 876 233322111 1233 788999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 159 PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
.++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|+
T Consensus 201 ~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~---dADl~~Aa 277 (517)
T 3r31_A 201 IEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFD---DADIESAV 277 (517)
T ss_dssp HHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TSCHHHHH
T ss_pred HHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEec---CCCHHHHH
Confidence 999 99999999999888999999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++
T Consensus 278 ~~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 356 (517)
T 3r31_A 278 GGAMLGNFY-SSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGAT 356 (517)
T ss_dssp HHHHHHHTS-CCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHhc-CCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999874 789
Q ss_pred eeeCCC-cC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 315 IVHGGL-LD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 315 ~~~gg~-~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
+++||. .+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 357 v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 436 (517)
T 3r31_A 357 LITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436 (517)
T ss_dssp EEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred EEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHH
Confidence 999993 11 36999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcC
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFL 447 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~ 447 (484)
+++++|+|+||+... ..+.+||||+|.||+|+++|++|+++|++.|+|+.+....
T Consensus 437 ~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~ 491 (517)
T 3r31_A 437 DGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKV 491 (517)
T ss_dssp HHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC--
T ss_pred HHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCC
Confidence 999999999999764 4789999999999999999999999999999998876443
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-95 Score=762.97 Aligned_cols=431 Identities=27% Similarity=0.354 Sum_probs=405.4
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++
T Consensus 42 ~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a 121 (495)
T 3b4w_A 42 MAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFA 121 (495)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999 99999999999999999999999999999999999999999997459999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
+.++++.+.. . +. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.
T Consensus 122 ~~~~~~~g~~-~--~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~ 197 (495)
T 3b4w_A 122 GAADKVTWTE-T--RT-GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFA 197 (495)
T ss_dssp TCGGGSCSEE-E--EE-ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHH
T ss_pred HHHHHhcCCc-c--cC-CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHH
Confidence 8887765432 1 11 122356889999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 160 LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++
T Consensus 198 eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~---dADl~~Aa~ 274 (495)
T 3b4w_A 198 EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILE---DVDLAAAIP 274 (495)
T ss_dssp HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT---TCCHHHHHH
T ss_pred HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECC---CCCHHHHHH
Confidence 99 99999999999778899999997 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |+++
T Consensus 275 ~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~ 353 (495)
T 3b4w_A 275 MMVFSGVM-NAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARL 353 (495)
T ss_dssp HHHHHHHG-GGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhh-cCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999864 6789
Q ss_pred eeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 316 VHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 316 ~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 354 ~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 433 (495)
T 3b4w_A 354 VCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQ 433 (495)
T ss_dssp EECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHH
T ss_pred EecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHh
Confidence 99997643 589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++|+|+||++. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 434 l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 434 IRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp SCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred CCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 999999999864 367899999999999999999999999999999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-95 Score=761.73 Aligned_cols=432 Identities=25% Similarity=0.372 Sum_probs=404.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~ 123 (505)
T 3prl_A 45 ALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADE 123 (505)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999985 999999999999999
Q ss_pred HHHhhcCccccCccccC---CCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 82 LDKWMAPKKRRLPLLFF---PASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
.+++.+... ....... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++
T Consensus 124 ~~~~~g~~~-~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll 202 (505)
T 3prl_A 124 ALRLNGETL-KGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEAL 202 (505)
T ss_dssp HHTCCEEEE-EGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHH
T ss_pred HHHhcCccc-cccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 887654321 1110010 235688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
.++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++ |||++.|
T Consensus 203 ~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~---dADl~~A 277 (505)
T 3prl_A 203 ADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLD---DADLKLT 277 (505)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECT---TCCHHHH
T ss_pred HHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCC---CCCHHHH
Confidence 998 99999999999 568899999997 999999999999999999887 899999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|||.+++++||++++.+++++.++++++.+ |++
T Consensus 278 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~ 356 (505)
T 3prl_A 278 ASQIVSGAFS-YSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGAT 356 (505)
T ss_dssp HHHHHHHHHG-GGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHh-cCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCE
Confidence 9999999999 99999999999999999999999999999999999998878899999999999999999999874 679
Q ss_pred eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 357 v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 434 (505)
T 3prl_A 357 LLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLE 434 (505)
T ss_dssp EEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSC
T ss_pred EEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCC
Confidence 9999974 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 435 aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 435 VGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp SSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred eeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 999999998653 4688999999999999999999999999999998875
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-95 Score=765.71 Aligned_cols=434 Identities=20% Similarity=0.255 Sum_probs=404.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~ 138 (521)
T 4e4g_A 60 LASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGI 138 (521)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999974 999999999999876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.. .+... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 139 ~~~~-~~~~~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~ea 215 (521)
T 4e4g_A 139 PHLQ-KSEFT--EGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEA 215 (521)
T ss_dssp HHHT-CEEEE--EEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHT
T ss_pred HHHh-cCccc--ccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh
Confidence 5443 22211 11122345788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.+
T Consensus 216 GlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~---dADl~~Aa~~i 292 (521)
T 4e4g_A 216 GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMP---DADLDQAANAL 292 (521)
T ss_dssp TCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcC---CCCHHHHHHHH
Confidence 99999999999888889999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
++++|. |+||.|++++|+|||++ +||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 293 ~~~~f~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~ 371 (521)
T 4e4g_A 293 IGAGYG-SAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLV 371 (521)
T ss_dssp HHHHHG-GGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHh-CCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 999999 99999999999999999 999999999999999999998 899999999999999999999999864 78999
Q ss_pred eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 372 ~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~ 451 (521)
T 4e4g_A 372 VDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFAS 451 (521)
T ss_dssp ECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHH
T ss_pred ecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHH
Confidence 999642 469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||+++. ...+.+||||+|.||+| +++|++|+++|++.|+|+.+.
T Consensus 452 ~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 452 RINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp HCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred hCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999999998764 34578999999999999 789999999999999998864
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-95 Score=763.11 Aligned_cols=432 Identities=24% Similarity=0.335 Sum_probs=405.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 138 (515)
T 2d4e_A 60 RGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEY 138 (515)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999998 6999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+.. . +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 139 ~~~~~g~~-~--~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea 215 (515)
T 2d4e_A 139 AEHAMEDR-T--FPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEA 215 (515)
T ss_dssp GGGTTCEE-E--CCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHT
T ss_pred HHHhcCcc-c--ccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHh
Confidence 87765321 1 11112345688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 216 GlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~---dADl~~Aa~~ 292 (515)
T 2d4e_A 216 DLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFA---DADLERALDA 292 (515)
T ss_dssp TCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred CCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcC---CCCHHHHHHH
Confidence 99999999999 567899999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 293 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~ 371 (515)
T 2d4e_A 293 VVFQIFS-FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLL 371 (515)
T ss_dssp HHHHHHG-GGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHh-cCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 888999999999999999999999864 67999
Q ss_pred eCCCcCC---------CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617 317 HGGLLDK---------ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK 387 (484)
Q Consensus 317 ~gg~~~~---------~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 387 (484)
+||..+. .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 372 ~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 450 (515)
T 2d4e_A 372 VGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAH 450 (515)
T ss_dssp ECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred eCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHH
Confidence 9997643 699999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 451 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 451 RLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp HHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 999999999999998754 4678999999999999999999999999999998864
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-95 Score=759.02 Aligned_cols=432 Identities=22% Similarity=0.331 Sum_probs=404.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 118 (479)
T 2imp_A 40 DGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEW 118 (479)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999997 5999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+... +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 119 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 195 (479)
T 2imp_A 119 ARRYEGEII---QSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEI 195 (479)
T ss_dssp TTTCCCEEE---CCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhhCCcc---ccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh
Confidence 776654321 11112335688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+ .+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 196 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~aa~~ 272 (479)
T 2imp_A 196 GLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD---DADLELAVKA 272 (479)
T ss_dssp TCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred CCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECC---CCCHHHHHHH
Confidence 999999999994 56899999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-C-CCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-K-DSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~-~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| + +++++||++++.+++++.++++++.+ |+++
T Consensus 273 i~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~ 351 (479)
T 2imp_A 273 IVDSRVI-NSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARV 351 (479)
T ss_dssp HHTTSST-TTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhh-cCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 9999999 99999999999999999999999999999999999999 6 79999999999999999999999864 6789
Q ss_pred eeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 316 VHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 316 ~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 352 ~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~ 431 (479)
T 2imp_A 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLK 431 (479)
T ss_dssp EECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCC
T ss_pred EECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCC
Confidence 999975 3368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+|+|+||++..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 432 ~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 432 FGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred EeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999987764 57899999999999999999999999999999765
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-94 Score=760.26 Aligned_cols=435 Identities=23% Similarity=0.351 Sum_probs=406.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 70 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 148 (516)
T 1uzb_A 70 KAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARA 148 (516)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.++... . ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 149 ~~~~~~~~~~-~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~ea 226 (516)
T 1uzb_A 149 ALRYRYPAVE-V-VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA 226 (516)
T ss_dssp HGGGCSSCCC-C-CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHhcCCccc-c-cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHh
Confidence 9887654311 0 1112335688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------cccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA------KHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++ |||+
T Consensus 227 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~---dADl 303 (516)
T 1uzb_A 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDE---TADF 303 (516)
T ss_dssp TCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECT---TSCH
T ss_pred CCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECC---CCCH
Confidence 99999999999 678899999998 999999999999999999998 78999999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcC
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVA 312 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 312 (484)
+.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+|++++++||++++.+++++.++++++.+.
T Consensus 304 ~~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 382 (516)
T 1uzb_A 304 DLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNE 382 (516)
T ss_dssp HHHHHHHHHHHHG-GGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHh-CCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHC
Confidence 9999999999999 999999999999999999999999999999999999988889999999999999999999998765
Q ss_pred CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 383 G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 462 (516)
T 1uzb_A 383 GQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARR 462 (516)
T ss_dssp SEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHH
T ss_pred CCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHH
Confidence 588899975 3469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++|++.|+|+.+
T Consensus 463 ~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 463 EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred hCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999997665556789999999999995 7899999999999998764
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-95 Score=757.04 Aligned_cols=427 Identities=27% Similarity=0.379 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 30 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~ 108 (486)
T 3pqa_A 30 ALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFY 108 (486)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999974 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+... . ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 109 ~~~~~~~~~-~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 183 (486)
T 3pqa_A 109 VKEHRDEVI-P----SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENA 183 (486)
T ss_dssp HHHCCEEEE-C----CTTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHhcCcee-c----CCCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHH
Confidence 988754321 1 12446788999999999999999999999999999999999999999999999999999999987
Q ss_pred -----cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 162 -----LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 162 -----lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|||||||+||++ |||++.
T Consensus 184 l~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~---dADl~~ 258 (486)
T 3pqa_A 184 LKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK---DADLNK 258 (486)
T ss_dssp HHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT---TSCHHH
T ss_pred HHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC---CCCHHH
Confidence 99999999999 456789999997 999999999999999999876 899999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ +
T Consensus 259 Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 337 (486)
T 3pqa_A 259 AVNALIKGSFI-YAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEG 337 (486)
T ss_dssp HHHHHHHHHHG-GGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-cCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 899999999999999999999999874 7
Q ss_pred CceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 313 DAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 313 ~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.+++++++++
T Consensus 338 a~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 413 (486)
T 3pqa_A 338 GKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAEN 413 (486)
T ss_dssp CEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHH
T ss_pred CEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHh
Confidence 799999965 5899999999 9999999999999999999999999 99999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
+++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 414 l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 414 LEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp SCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred CCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99999999998753 34589999999999999999999999999999988753
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-94 Score=752.26 Aligned_cols=432 Identities=22% Similarity=0.357 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++.
T Consensus 25 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 103 (462)
T 3etf_A 25 WANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARA-EVTKSAALCDWYAEH 103 (462)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999999999999999999999999999974 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.++.. ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 104 ~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~a 179 (462)
T 3etf_A 104 GPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEA 179 (462)
T ss_dssp HHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred HHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 888765431 1122346788999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 180 glP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~~i 256 (462)
T 3etf_A 180 GTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN---DADLELAVKAA 256 (462)
T ss_dssp TCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECC---CCCHHHHHHHH
Confidence 99999999999888899999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus 257 ~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~ 335 (462)
T 3etf_A 257 VAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLL 335 (462)
T ss_dssp HHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHh-cCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 899999999999999999999999874 679999
Q ss_pred CCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 318 GGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 318 gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 336 gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG 415 (462)
T 3etf_A 336 GGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECG 415 (462)
T ss_dssp CCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSS
T ss_pred CCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 9874 357999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 416 ~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 416 GVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp EEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred eEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999764 4688999999999999999999999999999998763
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-95 Score=757.21 Aligned_cols=432 Identities=25% Similarity=0.377 Sum_probs=404.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 43 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 121 (481)
T 3jz4_A 43 KMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEE 121 (481)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999975 999999999998877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
..+..... .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 122 ~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~a 198 (481)
T 3jz4_A 122 GKRIYGDT---IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA 198 (481)
T ss_dssp GGGCCEEE---ECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhcCcc---ccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 65542211 111122446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 199 GlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~~ 275 (481)
T 3jz4_A 199 GVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFD---DADLDKAVEG 275 (481)
T ss_dssp TCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECT---TSCHHHHHHH
T ss_pred CcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcC---CCCHHHHHHH
Confidence 99999999999 678899999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus 276 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 354 (481)
T 3jz4_A 276 ALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVV 354 (481)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHH-hCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 77999
Q ss_pred eCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 355 ~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~ 434 (481)
T 3jz4_A 355 CGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEY 434 (481)
T ss_dssp ECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCC
T ss_pred eCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCe
Confidence 99976 44689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||++.. ..+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus 435 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 435 GIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp SEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred eeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999998765 467899999999999999999999999999999764
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-95 Score=757.03 Aligned_cols=432 Identities=26% Similarity=0.365 Sum_probs=404.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus 44 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~ 122 (487)
T 2w8n_A 44 DCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEE 122 (487)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999985 999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.. +.... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 123 ~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 199 (487)
T 2w8n_A 123 ARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199 (487)
T ss_dssp GGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh
Confidence 876432 21111 123446688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeecc---C-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 162 -LDCKAIKVTN---G-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 162 -lp~g~v~~v~---g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+|+|++|+++ | +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|
T Consensus 200 GlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~---dADl~~A 276 (487)
T 2w8n_A 200 GIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFD---SANVDQA 276 (487)
T ss_dssp TCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECT---TSCHHHH
T ss_pred CCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECC---CCCHHHH
Confidence 9999999999 8 567899999998 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|++++++ +++||| ++++++||++++.+++++.++++++.+ |
T Consensus 277 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 355 (487)
T 2w8n_A 277 VAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKG 355 (487)
T ss_dssp HHHHHHHHTC-CCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHh-CCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999 99999999999999999999999999999999 999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcCCCCC-eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLDKENL-FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~~~g~-~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 356 a~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 435 (487)
T 2w8n_A 356 ATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAE 435 (487)
T ss_dssp CEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHH
T ss_pred CEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHH
Confidence 78999997655688 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||++..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 436 ~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 436 QLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred hCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999999997754 56799999999999999999999999999999764
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-94 Score=752.08 Aligned_cols=441 Identities=21% Similarity=0.303 Sum_probs=408.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..+ . .|+...+..+++++..
T Consensus 24 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-~-~ev~~~~~~~~~~~~~ 101 (474)
T 4h7n_A 24 PPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT-V-LEIDSFLASIDRWCGL 101 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH-H-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-H-HHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999999999999999999999999999999999998544 3 4999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
..++......... .........++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 102 ~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a 179 (474)
T 4h7n_A 102 APELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTV 179 (474)
T ss_dssp HHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTC
T ss_pred hhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhh
Confidence 8887665432211 12234567889999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~ 240 (484)
+|+|++|+++|+.+.+..|+.| +|+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.++
T Consensus 180 g~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~---dAdl~~aa~~i~ 255 (474)
T 4h7n_A 180 PELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLE---SANLELATSAIL 255 (474)
T ss_dssp TTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECT---TSCHHHHHHHHH
T ss_pred cccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCc---hhhHHHHHHHHH
Confidence 9999999999999999999977 99999999999999999999999999999999999999999 999999999999
Q ss_pred HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHG 318 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~g 318 (484)
+++|. |+||.|++++|+|||++++|+|+++|.+++.++++|+| ++++++||++++.+.+++.++++++.+ ++.++.|
T Consensus 256 ~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~G 334 (474)
T 4h7n_A 256 WGAVV-NTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCG 334 (474)
T ss_dssp HHHHG-GGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred hhhcc-CCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccC
Confidence 99999 99999999999999999999999999999999999999 889999999999999999999999875 6788888
Q ss_pred CCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 319 GLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 319 g~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
|..+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 335 g~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG 414 (474)
T 4h7n_A 335 GKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAG 414 (474)
T ss_dssp CCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCS
T ss_pred CcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCee
Confidence 8753 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEecCcCCCCC
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRSFFLELEP 451 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~~~~~~~ 451 (484)
+|+||+.+.+...+..||||+|.||+| +++|.+|+++|++.|+|+++....+.++
T Consensus 415 ~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 415 AISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp EEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTT
T ss_pred EEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCC
Confidence 999999887767789999999999998 7899999999999999998865433333
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-94 Score=754.06 Aligned_cols=433 Identities=21% Similarity=0.254 Sum_probs=400.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+|||..++. .|+..+++.+++++..
T Consensus 55 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 133 (500)
T 2j6l_A 55 QASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGL 133 (500)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999995 5999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc-
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL- 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~- 160 (484)
.+++.+.. . +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 134 ~~~~~g~~-~--~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 210 (500)
T 2j6l_A 134 SRMIGGPI-L--PSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKV 210 (500)
T ss_dssp TTTCCCBE-E--CCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHhcCcc-c--cccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHH
Confidence 76653321 1 1111122356789999999999999999999999999999999999999999999999999998765
Q ss_pred ---c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 161 ---Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 161 ---a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+ +|+|++|+++|+.++++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|
T Consensus 211 l~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~---dADl~~A 287 (500)
T 2j6l_A 211 LEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFE---DADLSLV 287 (500)
T ss_dssp HHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TCCHHHH
T ss_pred HHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECC---CCCHHHH
Confidence 4 99999999999778899999997 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus 288 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga 366 (500)
T 2j6l_A 288 VPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGG 366 (500)
T ss_dssp HHHHHHHHHG-GGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHh-cCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999864 67
Q ss_pred ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh--
Q 038617 314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV-- 390 (484)
Q Consensus 314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~-- 390 (484)
++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 367 ~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 446 (500)
T 2j6l_A 367 TVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGP 446 (500)
T ss_dssp EEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHST
T ss_pred EEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhh
Confidence 89999975 346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
.++++|+|+||+.... ..+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 447 ~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 447 KGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp TSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred ccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 7799999999986542 456899999999999999999999999999999765
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-94 Score=753.83 Aligned_cols=433 Identities=23% Similarity=0.371 Sum_probs=387.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 46 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~ 124 (508)
T 3r64_A 46 QASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASF 124 (508)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999986 999999999998876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~ 160 (484)
.+.+.+ ..... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++ ..|++++.+
T Consensus 125 ~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~ 201 (508)
T 3r64_A 125 PGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEE 201 (508)
T ss_dssp TTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHT
T ss_pred hhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHH
Confidence 654322 11110 11234678899999999999999999999999999999999999999999999999 999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc--ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK--HLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~--~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++ ++||+++|+|||||+||++ |||++.|
T Consensus 202 aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~---dADl~~A 278 (508)
T 3r64_A 202 AGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLA---DADIDAA 278 (508)
T ss_dssp TTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECT---TSCHHHH
T ss_pred hCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECC---CCCHHHH
Confidence 9 99999999999 478999999997 9999999999999999999998 8999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus 279 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga 357 (508)
T 3r64_A 279 AQAAAVGAFL-HQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGA 357 (508)
T ss_dssp HHHHHHHHHT-STTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHh-cCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999875 67
Q ss_pred ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
++++||.. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 358 ~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 435 (508)
T 3r64_A 358 TVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQI 435 (508)
T ss_dssp EEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTS
T ss_pred EEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhC
Confidence 99999975 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 436 ~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 436 DSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp CSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred CcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 9999999998754 57889999999999999999999999999999988753
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-94 Score=754.62 Aligned_cols=440 Identities=23% Similarity=0.311 Sum_probs=405.3
Q ss_pred CCCHHHHHHHHHHHHHHhH-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR-SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.
T Consensus 50 ~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~ 128 (501)
T 1uxt_A 50 SPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAEL 128 (501)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGG
T ss_pred CCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999 99999999999999999999999999999999999999999998 599999999999988
Q ss_pred HHHHhhcCccccCccccC--CCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 81 CLDKWMAPKKRRLPLLFF--PASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
..+++... ......... +...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++
T Consensus 129 ~~~~~~g~-~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~ 207 (501)
T 1uxt_A 129 DLKKIGGD-YIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKAL 207 (501)
T ss_dssp GGGGTCCE-EEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHhcCc-cccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHH
Confidence 88776432 111110011 225688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 159 PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
.++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++ |||++.|+
T Consensus 208 ~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~---dADl~~Aa 282 (501)
T 1uxt_A 208 LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLE---DADLDLAA 282 (501)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECT---TSCHHHHH
T ss_pred HHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECC---CCCHHHHH
Confidence 999 99999999999558899999997 999999999999999999887 899999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |++
T Consensus 283 ~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 361 (501)
T 1uxt_A 283 DKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGR 361 (501)
T ss_dssp HHHHHHHHG-GGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhc-CCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999874 678
Q ss_pred eeeCCCcCCCC-CeeeeEEEeCCC---CCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 315 IVHGGLLDKEN-LFIEPTILLDPP---LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 315 ~~~gg~~~~~g-~~~~Ptil~~~~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
+++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 362 ~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 439 (501)
T 1uxt_A 362 VLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV 439 (501)
T ss_dssp EEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHH
T ss_pred EEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH
Confidence 9999975 57 999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCC
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRY 453 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~ 453 (484)
+++++|+|+||+++ +...+.+||||+|.||+|+++|.+|+++|++.|+|+.+.. .+..++|
T Consensus 440 ~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~-~~~~~~~ 500 (501)
T 1uxt_A 440 RLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK-GKGVWKY 500 (501)
T ss_dssp HHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECT-TSSSSSC
T ss_pred HhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEecC-CCccccc
Confidence 99999999999874 2356889999999999999999999999999999988742 2344444
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-93 Score=749.31 Aligned_cols=433 Identities=23% Similarity=0.328 Sum_probs=382.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 118 (485)
T 4dng_A 40 LATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTY 118 (485)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999986 999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~ 160 (484)
.+.+. +..... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..|.+++.+
T Consensus 119 ~~~~~-~~~~~~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~ 196 (485)
T 4dng_A 119 TGELG-GVKEVP-SDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEH 196 (485)
T ss_dssp GGGCS-CEECCC-CSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHH
T ss_pred HHHhC-Ceeccc-cCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHH
Confidence 76532 221111 011234678899999999999999999999999999999999999999999999999 999999999
Q ss_pred c-cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++|+. +.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++
T Consensus 197 aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~ 273 (485)
T 4dng_A 197 AGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLS---DADVDRAVD 273 (485)
T ss_dssp TTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECT---TSCHHHHHH
T ss_pred hCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcC---CCCHHHHHH
Confidence 9 9999999999955 5899999997 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++
T Consensus 274 ~i~~~~~~-~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 352 (485)
T 4dng_A 274 AAIFGKFI-HQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIEL 352 (485)
T ss_dssp HHHHHHTT-CC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHh-cCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999874 6899
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 353 ~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~ 430 (485)
T 4dng_A 353 AVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDS 430 (485)
T ss_dssp EECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCS
T ss_pred EeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 999975 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 431 G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 431 GMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp SEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred ceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999998754 5788999999999999999999999999999998874
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-93 Score=746.07 Aligned_cols=427 Identities=26% Similarity=0.351 Sum_probs=400.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 36 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 114 (475)
T 1euh_A 36 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEE 114 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999996 5999999999999998
Q ss_pred HHHhhcCccccCccccCC----Ccc-eEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 82 LDKWMAPKKRRLPLLFFP----ASG-EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
.+++.+... ... ..+ ... +++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++
T Consensus 115 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 191 (475)
T 1euh_A 115 GLRMEGEVL-EGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAE 191 (475)
T ss_dssp HTTCCEEEE-EGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHH
T ss_pred HHHhcCCcc-cCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHH
Confidence 877654321 111 122 345 889999999999999999999999999999999999999999999999999999
Q ss_pred Hhccc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617 157 TIPLY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233 (484)
Q Consensus 157 ~l~~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~ 233 (484)
++.++ +|+|++|+++|+ .+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++ |||++
T Consensus 192 ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~---dADl~ 266 (475)
T 1euh_A 192 AFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLE---DADLE 266 (475)
T ss_dssp HHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECT---TSCHH
T ss_pred HHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEECC---CCCHH
Confidence 99999 999999999995 56899999997 999999999999999999887 899999999999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV- 311 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~- 311 (484)
.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| + ++++||++++.+++++.++++++.+
T Consensus 267 ~aa~~i~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~ 344 (475)
T 1euh_A 267 LTAKNIIAGAFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDK 344 (475)
T ss_dssp HHHHHHHHHHHG-GGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh-cCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999 99999999999999999999999999999999999999 6 9999999999999999999999864
Q ss_pred CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 312 ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 312 ~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 345 Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~ 422 (475)
T 1euh_A 345 GATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAE 422 (475)
T ss_dssp TCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHH
T ss_pred CCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHH
Confidence 6788999865 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECC-CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFND-TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||+ +..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 423 ~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 423 QLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred hCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 99999999998 6543 57899999999999999999999999999999875
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-93 Score=744.32 Aligned_cols=433 Identities=23% Similarity=0.309 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 39 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~ 117 (486)
T 1t90_A 39 ISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGA 117 (486)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999987 5999999999998865
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+ .++.... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 118 ~~~~-~g~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 194 (486)
T 1t90_A 118 PSLM-MGDSLAS--IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKA 194 (486)
T ss_dssp HHHH-CEEEEEE--EETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHT
T ss_pred HHHh-cCccccc--CCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 5443 3222111 112335678999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 195 GlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~---dADl~~Aa~~i 271 (486)
T 1t90_A 195 GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN---DANLEDTVTNI 271 (486)
T ss_dssp TCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECC---CCCHHHHHHHH
Confidence 99999999999878899999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCc-eEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 240 IGGKFASCNGQVCVGVDY-ILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
++++|. |+||.|++++| +|||++ +|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus 272 ~~~~~~-n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~ 349 (486)
T 1t90_A 272 VGAAFG-SAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLV 349 (486)
T ss_dssp HHHHHG-GGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHh-CCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 999999 99999999999 999999 99999999999999999998 889999999999999999999999864 78999
Q ss_pred eCCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 317 HGGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 317 ~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 350 ~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 429 (486)
T 1t90_A 350 CDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENID 429 (486)
T ss_dssp ECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCC
T ss_pred eCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCC
Confidence 998642 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+|+||++.. ...+.+||||+|.||+| +++|.+|+++|++.|+|+.+.
T Consensus 430 aG~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 430 AGMLGINLGVP-APMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp CSEEEESCSCC-CCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred cCeEEECCCCC-CCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999998643 34578999999999999 899999999999999998763
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-93 Score=746.25 Aligned_cols=425 Identities=29% Similarity=0.433 Sum_probs=379.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.++++++.
T Consensus 41 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 120 (478)
T 3ty7_A 41 KGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDA 120 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999556999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.... .....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 121 ~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~a 192 (478)
T 3ty7_A 121 LDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKV 192 (478)
T ss_dssp HHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHh
Confidence 88765422 1235688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 193 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~~ 269 (478)
T 3ty7_A 193 GVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLD---DVDIKEAAKA 269 (478)
T ss_dssp TCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECT---TSCHHHHHHH
T ss_pred CcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCC---CCCHHHHHHH
Confidence 99999999999 668999999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++. +|++++
T Consensus 270 i~~~~~~-~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~ 348 (478)
T 3ty7_A 270 TTGKVVN-NTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELF 348 (478)
T ss_dssp HHHHHHG-GGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHH-hCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 88999999999999999999999986 478999
Q ss_pred eCCCc-C---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 317 HGGLL-D---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 317 ~gg~~-~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+||.. + ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++
T Consensus 349 ~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~ 428 (478)
T 3ty7_A 349 YGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARS 428 (478)
T ss_dssp ECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHH
T ss_pred ecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 99842 2 3689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|+|+||+ .. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 429 l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 429 IEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp SCSSEEEETT-CC------------------------CCGGGEEEEEEE
T ss_pred CCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999998 32 4678999999999999999999999999999986
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-92 Score=743.98 Aligned_cols=444 Identities=19% Similarity=0.230 Sum_probs=406.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDN-EDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++ +++|+.++++|+||+..++..+|+..+++.+++++.
T Consensus 96 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~ 175 (563)
T 4e3x_A 96 YADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAK 175 (563)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999 999999999999999999987449999999999999
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
.++++.+.+.... ......+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..|++++.+
T Consensus 176 ~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~e 251 (563)
T 4e3x_A 176 FAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILRE 251 (563)
T ss_dssp HHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHH
Confidence 9988866432211 1122345677888999999999999999999999999 59999999999999999999999999
Q ss_pred c-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCc------eeeecCCcCceEEcCCCCCCC
Q 038617 161 Y-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTP------VTLELGGKCPAILDTLSSPLD 231 (484)
Q Consensus 161 a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~------~~lelgG~~p~iV~~~~~daD 231 (484)
+ +|+|+||+|+|+ .+.++.|++|+ ||+|+||||+.+|+.|.+.+++++|| +++|+|||||+||++ |||
T Consensus 252 AGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~---dAD 328 (563)
T 4e3x_A 252 AGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHS---SAD 328 (563)
T ss_dssp TTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECT---TSC
T ss_pred hCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCC---CCC
Confidence 9 999999999995 56899999997 99999999999999999999999885 999999999999999 999
Q ss_pred HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhch
Q 038617 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDP 309 (484)
Q Consensus 232 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a 309 (484)
++.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++
T Consensus 329 ld~Aa~~iv~~~f~-~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a 407 (563)
T 4e3x_A 329 VDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHA 407 (563)
T ss_dssp HHHHHHHHHHHHHG-GGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-cCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999987 6789999999999999999999998
Q ss_pred h--cCCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHH-hcCCCCceEEEecCCH
Q 038617 310 L--VADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFI-NSRPKPLAIYAFTKDE 383 (484)
Q Consensus 310 ~--~~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~ 383 (484)
. +++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.
T Consensus 408 ~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~ 487 (563)
T 4e3x_A 408 RSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDK 487 (563)
T ss_dssp HHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCH
T ss_pred hhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCH
Confidence 7 367899999753 4699999999999999999999999999999999997 79999999 7999999999999999
Q ss_pred HHHHHHhhccc--eeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEecCcCCCCCCCC
Q 038617 384 TFKKQIVSGTS--SGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRSFFLELEPRYP 454 (484)
Q Consensus 384 ~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~ 454 (484)
+.+++++++++ +|+|+||+.+++...+.+||||+|.||+| +.+|++++++|++.|+|... +..+..++||
T Consensus 488 ~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~yp 560 (563)
T 4e3x_A 488 AIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRYS 560 (563)
T ss_dssp HHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSCT
T ss_pred HHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccCC
Confidence 99999999965 99999999876656788999999999998 88999999999999999876 3334456665
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-90 Score=765.47 Aligned_cols=435 Identities=21% Similarity=0.291 Sum_probs=408.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 564 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~ 642 (1026)
T 4f9i_A 564 QAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYARE 642 (1026)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999975 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++..+..... ..+....+.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 643 ~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eA 719 (1026)
T 4f9i_A 643 MIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA 719 (1026)
T ss_dssp HHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT
T ss_pred HHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHh
Confidence 988765432211 23446778999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------cccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA------KHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+|+| +.++++.|++|+ ||.|+||||+.+|+.|.+.++ +++||+++|+|||||+||++ |||+
T Consensus 720 GlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~---dADl 796 (1026)
T 4f9i_A 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDD---DADL 796 (1026)
T ss_dssp TCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECT---TCCH
T ss_pred CcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECC---CCCH
Confidence 99999999999 557899999998 999999999999999999988 57899999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++|+|. |+||.|++++|+|||++++|+|+++|+++++++++|+| ++++++||+|++.+++++.++|+++.+
T Consensus 797 d~Aa~~iv~saf~-~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~ 875 (1026)
T 4f9i_A 797 DEAVPHVLYSAFG-FQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKR 875 (1026)
T ss_dssp HHHHHHHHHHHHG-GGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999999999999999 889999999999999999999999876
Q ss_pred CCceeeCCCcCCC-CCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 312 ADAIVHGGLLDKE-NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 312 ~~~~~~gg~~~~~-g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
.+++++||..+.. |+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++
T Consensus 876 ~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~ 955 (1026)
T 4f9i_A 876 EGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955 (1026)
T ss_dssp HSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH
T ss_pred CCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH
Confidence 5599999976554 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEec
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|..+.
T Consensus 956 ~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 956 REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999998876667889999999999995 57999999999999998875
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-90 Score=721.27 Aligned_cols=426 Identities=22% Similarity=0.319 Sum_probs=396.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 38 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~ 116 (490)
T 3ju8_A 38 GADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQA 116 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999997 5999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+.... ...+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 117 ~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 192 (490)
T 3ju8_A 117 FRERTGEKSG----PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQA 192 (490)
T ss_dssp HHHHSCCEEE----EETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred HHHhcCCccc----cCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHh
Confidence 8776543321 112334567799999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCce-eeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPV-TLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~-~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.++++++|+ ++|+|||||+||++ |||++.|++.
T Consensus 193 GlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~---dADl~~Aa~~ 269 (490)
T 3ju8_A 193 GLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEE---VADLDAAVYT 269 (490)
T ss_dssp TCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECC---CSCHHHHHHH
T ss_pred CcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999888999999997 999999999999999999999999998 79999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccch-HHHHHHHHHHHHHhhcCCC-C-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKF-AATLIESLKTTIKKFYGEN-P-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+++++|. |+||.|++++|+|||+++ ||+|+++|+++++++++|+ | ++++++||++++.+++++.++++++.+ |++
T Consensus 270 i~~~~~~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 348 (490)
T 3ju8_A 270 IIQSAFI-SAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQ 348 (490)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHh-cCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCE
Confidence 9999999 999999999999999996 9999999999999999998 7 889999999999999999999999864 789
Q ss_pred eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+++||.. +.+|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 349 ~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 427 (490)
T 3ju8_A 349 PLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES 427 (490)
T ss_dssp EEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHC
T ss_pred EEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhc
Confidence 9999865 3579999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++|+|+||+++.+ ..+.+||||+|.||.+ ++++|++.|+|+...
T Consensus 428 ~aG~v~vN~~~~~-~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 428 RAGIVNWNKQLTG-AASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp CSSEEEESSCSSC-CCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CcceEEECCCcCC-CCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999997653 4578999999999974 479999999987764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-88 Score=748.88 Aligned_cols=433 Identities=21% Similarity=0.320 Sum_probs=402.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 546 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a~~ 624 (1001)
T 3haz_A 546 DATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQ 624 (1001)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999997 4999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+.... .+ ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 625 a~~~~g~~~~-~~-~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 625 GRKLFGSETA-MP-GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHSSCEE-CC-CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHhhcCcccc-cc-CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 8887543211 11 123456788999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
+|+|++|+++|+.+.+..|++|+ ||.|+||||+.+|+.|++.++++ ++|+++|+|||||+||++ |||++.|+
T Consensus 703 GlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~---dADld~Aa 779 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADA---TALPEQVA 779 (1001)
T ss_dssp TCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECT---TSCHHHHH
T ss_pred CcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcC---CCCHHHHH
Confidence 99999999999655599999998 99999999999999999988864 799999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCce
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAI 315 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~ 315 (484)
+.+++|+|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++|+++.+++++
T Consensus 780 ~~iv~s~f~-naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v 858 (1001)
T 3haz_A 780 DDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL 858 (1001)
T ss_dssp HHHHHHHHG-GGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHh-CCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE
Confidence 999999999 99999999999999999999999999999999999999 8999999999999999999999998765688
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+||..+..|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||++||||+|.++++++++++
T Consensus 859 -~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l 935 (1001)
T 3haz_A 859 -HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRV 935 (1001)
T ss_dssp -EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHC
T ss_pred -eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhC
Confidence 8888776799999999985 6788999999999999999996 7999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++|+|+||+.+.+...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 936 ~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 936 QVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999887666678999999999999 567899999999999998875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-88 Score=717.42 Aligned_cols=433 Identities=17% Similarity=0.218 Sum_probs=387.5
Q ss_pred CCHHHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
++ +|+++|+++|++| |+.|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 41 ~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~ 118 (534)
T 2y53_A 41 EG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKL 118 (534)
T ss_dssp TT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 45 8999999999999 59999999999999999999999999999999999999999999975 999999999999888
Q ss_pred HHHhhcCcc---cc-CccccCCC-cceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHH
Q 038617 82 LDKWMAPKK---RR-LPLLFFPA-SGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLA 155 (484)
Q Consensus 82 ~~~~~~~~~---~~-~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~ 155 (484)
.+++..... .. .+....+. ...+.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|+++..|+
T Consensus 119 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~ 198 (534)
T 2y53_A 119 GASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMV 198 (534)
T ss_dssp HHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHH
Confidence 765432110 00 01111111 347789997 9999999999999999999999999999999999999999999999
Q ss_pred HHhccc--cCccceeeccCChhHHHHHHhC--CCCeEEEeCChHHHHHHHHHHh--cccCceeeecCCcCceEEcCCCCC
Q 038617 156 ETIPLY--LDCKAIKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAA--KHLTPVTLELGGKCPAILDTLSSP 229 (484)
Q Consensus 156 ~~l~~a--lp~g~v~~v~g~~~~~~~L~~~--~vd~v~ftGs~~~g~~i~~~a~--~~~~~~~lelgG~~p~iV~~~~~d 229 (484)
+++.++ +|+|++|+|+|+.. .+.++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+||++ |
T Consensus 199 ~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~---d 272 (534)
T 2y53_A 199 ADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCA---D 272 (534)
T ss_dssp HHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECT---T
T ss_pred HHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECC---C
Confidence 999997 59999999998432 23443 4899999999999999998764 88999999999999999999 9
Q ss_pred C-----CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHH
Q 038617 230 L-----DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLR 303 (484)
Q Consensus 230 a-----Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~ 303 (484)
| |++.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.
T Consensus 273 A~~~~~Dl~~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~ 351 (534)
T 2y53_A 273 ATPDTPAFDLFIKEVVREMTV-KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351 (534)
T ss_dssp CCTTSHHHHHHHHHHHHHHHG-GGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHh-CCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHH
Confidence 9 999999999999999 99999999999999999999999999999999999999 8899999999999999999
Q ss_pred HHhhchhcCCceeeCCCcC-------CCCCeeeeEEEeCCCCC--CcccccceecceeeeeeeC---CH-----HHHHHH
Q 038617 304 KLLKDPLVADAIVHGGLLD-------KENLFIEPTILLDPPLD--AEIMTEEIFGPILPIITLN---NI-----QESIEF 366 (484)
Q Consensus 304 ~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptil~~~~~~--~~i~~eE~fgPvl~v~~~~---~~-----~eai~~ 366 (484)
++|+++.+++++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+ ||||++
T Consensus 352 ~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~ 431 (534)
T 2y53_A 352 AGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVAL 431 (534)
T ss_dssp HHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHH
T ss_pred HHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHH
Confidence 9999986678999998642 35899999999999987 6899999999999999999 99 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHhhcc--ceeeEEECCCccc-------cCCCCCCcccCCCCCCCCc-chHHHHHHhhh
Q 038617 367 INSRPKPLAIYAFTKDETFKKQIVSGT--SSGSLIFNDTLVQ-------QLCDVLPFGGVGQSGIGRY-HGHYSFETFSH 436 (484)
Q Consensus 367 ~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~ 436 (484)
+|+++|||++||||+|.++++++++++ ++|+|+||++... ...+.+||||+|.||+|++ +|.+++++|++
T Consensus 432 aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~ 511 (534)
T 2y53_A 432 ARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHR 511 (534)
T ss_dssp HHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEE
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhh
Confidence 999999999999999999999999999 8999999986421 2357899999999999999 69999999999
Q ss_pred ccEEEEec
Q 038617 437 EKAIMQRS 444 (484)
Q Consensus 437 ~k~v~~~~ 444 (484)
.|++...+
T Consensus 512 ~k~v~~~p 519 (534)
T 2y53_A 512 RSAIQAAS 519 (534)
T ss_dssp EEEEEEEH
T ss_pred hheeecCH
Confidence 99987754
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-86 Score=699.28 Aligned_cols=425 Identities=18% Similarity=0.176 Sum_probs=384.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~ 137 (528)
T 3v4c_A 59 VGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADH 137 (528)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999987 4999999999999999
Q ss_pred HHH--hhcCccccC-cc--ccCCCcceEEeecceEEEEEccCchhHHHHH--hHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617 82 LDK--WMAPKKRRL-PL--LFFPASGEVVSEPFGVVLICSAWNFPINLAL--EPLIGAIAAGNTVMLKPSELAVECASFL 154 (484)
Q Consensus 82 ~~~--~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~i~~ALaaGN~Vvlkps~~~~~t~~~l 154 (484)
+++ +..+..... +. ...+...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|.|+..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 217 (528)
T 3v4c_A 138 IEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIV 217 (528)
T ss_dssp HHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHH
Confidence 887 433321100 00 0122346789999999999999999999865 8999999999999999999999999999
Q ss_pred HHHhc----cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc--CceeeecCCcCceEEcC
Q 038617 155 AETIP----LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL--TPVTLELGGKCPAILDT 225 (484)
Q Consensus 155 ~~~l~----~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~ 225 (484)
++++. ++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+|||||+||++
T Consensus 218 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~ 297 (528)
T 3v4c_A 218 AEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLP 297 (528)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECH
T ss_pred HHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECC
Confidence 99765 45 99999999999 668999999998 999999999999999999999999 99999999999999999
Q ss_pred CCCCC---CHHHHHHHHHHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHH
Q 038617 226 LSSPL---DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301 (484)
Q Consensus 226 ~~~da---Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~ 301 (484)
|| |++.|++.+++++|. |+||.|++++|||||++ +||+|+++|++++++++. ++.+||++++.+.++
T Consensus 298 ---dAd~~dl~~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-----~~~~gp~~~~~~~~~ 368 (528)
T 3v4c_A 298 ---EALKARAETLGQGWAGSLTM-GAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAP-----QTMLTDGIAKAYRDG 368 (528)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHG-GGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCC-----EECSCHHHHHHHHHH
T ss_pred ---CCChhhHHHHHHHHHHHHHh-cCCCccccCcEEEEecccHHHHHHHHHHHHHHhccc-----CCCCCHHHHHHHHHH
Confidence 99 889999999999999 99999999999999997 999999999999998754 367999999998888
Q ss_pred HHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCC---CcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEE
Q 038617 302 LRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLD---AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA 378 (484)
Q Consensus 302 ~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 378 (484)
+.+++++ +|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 369 v~~~~~~--~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v 444 (528)
T 3v4c_A 369 QARFATR--NAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATI 444 (528)
T ss_dssp HHHHHTC--TTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHh--CCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEE
Confidence 8888863 37899999975 6999999999988877 899999999999999999999999999999999999999
Q ss_pred ecC--CHHHHHHHhhccc--eeeEEECCCccc-cCCCCCCccc-CCCCCCCCcc--hHHHHHHhhhccEE
Q 038617 379 FTK--DETFKKQIVSGTS--SGSLIFNDTLVQ-QLCDVLPFGG-VGQSGIGRYH--GHYSFETFSHEKAI 440 (484)
Q Consensus 379 ~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~-~~~~~~pfGG-~~~SG~G~~~--g~~~~~~f~~~k~v 440 (484)
||+ |.+++++++++++ +|+|+||+.+++ ...+.+|||| +|.||+|+++ |++|+++|++.|++
T Consensus 445 ~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 445 HMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp ECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred EcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 999 8999999999998 999999996643 2468899999 9999999986 99999999998864
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-85 Score=686.92 Aligned_cols=423 Identities=17% Similarity=0.180 Sum_probs=378.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus 26 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~ 104 (510)
T 1ez0_A 26 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADV 104 (510)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999998886 4999999999999998
Q ss_pred HHH--hhcCcccc-Cccc-cCC-CcceEEeecceEEEEEccCchhHHHH--HhHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617 82 LDK--WMAPKKRR-LPLL-FFP-ASGEVVSEPFGVVLICSAWNFPINLA--LEPLIGAIAAGNTVMLKPSELAVECASFL 154 (484)
Q Consensus 82 ~~~--~~~~~~~~-~~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~i~~ALaaGN~Vvlkps~~~~~t~~~l 154 (484)
+++ |.++.... .+.. ..+ ...+++++|+|||++|+|||||+.++ ++++++||++||+||+|||+.+|.|+..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 184 (510)
T 1ez0_A 105 VNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 184 (510)
T ss_dssp HHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHH
Confidence 876 54422110 0000 111 13578999999999999999999985 49999999999999999999999999999
Q ss_pred HHHhc----cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc--CceeeecCCcCceEEcC
Q 038617 155 AETIP----LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL--TPVTLELGGKCPAILDT 225 (484)
Q Consensus 155 ~~~l~----~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~ 225 (484)
++++. ++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+|||||+||++
T Consensus 185 ~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~ 264 (510)
T 1ez0_A 185 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFP 264 (510)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECH
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeC
Confidence 99984 45 89999999999 678899999998 999999999999999999999886 99999999999999999
Q ss_pred CCCCCCHH--HHHHHHHHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHH
Q 038617 226 LSSPLDIK--VTVKRIIGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERL 302 (484)
Q Consensus 226 ~~~daDl~--~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~ 302 (484)
|||++ .|++.+++++|. |+||.|++++|||||++ +||+|+++|++++++++. ||++++.+.+++
T Consensus 265 ---dADl~~~~aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~~~~~~~~ 331 (510)
T 1ez0_A 265 ---SAMRAKADLADQFVASMTM-GCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLTPGIRDSY 331 (510)
T ss_dssp ---HHHHHCTTHHHHHHHHHTG-GGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSSHHHHHHH
T ss_pred ---CCCccHHHHHHHHHHHHHc-CCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCCHHHHHHH
Confidence 99999 999999999999 99999999999999999 999999999999998763 688888888888
Q ss_pred HHHhhchh--cCCceeeCCCcCCCCCeeeeEEEeCCCCC---CcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEE
Q 038617 303 RKLLKDPL--VADAIVHGGLLDKENLFIEPTILLDPPLD---AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIY 377 (484)
Q Consensus 303 ~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptil~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 377 (484)
.++++++. +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 332 ~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~ 408 (510)
T 1ez0_A 332 QSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 408 (510)
T ss_dssp HHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEE
Confidence 88888876 2678899986 3899999999988777 99999999999999999999999999999999999999
Q ss_pred EecCCH--HHHHHHhhcc--ceeeEEECCCcccc-CCCCCCccc-CCCCCCCCc--chHHHHHHhhhccEEE
Q 038617 378 AFTKDE--TFKKQIVSGT--SSGSLIFNDTLVQQ-LCDVLPFGG-VGQSGIGRY--HGHYSFETFSHEKAIM 441 (484)
Q Consensus 378 v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~G~~--~g~~~~~~f~~~k~v~ 441 (484)
|||+|. ++++++++++ ++|+|+||+++.+. ..+.+|||| +|.||.|+. +|.+|+++|++.|++.
T Consensus 409 v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 409 IHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp EECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred EEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 999987 7999999999 79999999876432 246799999 788998754 7999999999887654
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-81 Score=647.91 Aligned_cols=405 Identities=15% Similarity=0.149 Sum_probs=326.7
Q ss_pred HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhHHHHHH-HHHHHHHHHHH
Q 038617 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYRDEIGL-IKKSAKYALSC 81 (484)
Q Consensus 7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~ev~~-~~~~~~~~~~~ 81 (484)
.+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||. .++...|+.. +...++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999998 8876569988 88999999999
Q ss_pred HHHhhcCccc--cC-ccc--cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 82 LDKWMAPKKR--RL-PLL--FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 82 ~~~~~~~~~~--~~-~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
++++...... .. +.. ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 9888643210 00 100 11335678999999999999999 9 9999999999999999999999999999999999
Q ss_pred Hhc----c----c-cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 157 TIP----L----Y-LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 157 ~l~----~----a-lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
++. + + +|+|++|+++ +. ++++.|++|+ ||+|+||||+.+|+.|++.+ +||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 65 6788999998 99999999999999999876 699999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcC---CCCCCCCccccccCHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYG---ENPKDSKSISRIINEYHFERL 302 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~gpli~~~~~~~~ 302 (484)
|||++.|++.+++++|. |+| .|++++|||||+++ |+|+++|.++++++++ |||..
T Consensus 249 ---dADl~~Aa~~i~~~~~~-n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---------------- 306 (468)
T 1vlu_A 249 ---DADLIKAKRISLDAKTN-YPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---------------- 306 (468)
T ss_dssp ---TCCHHHHHHHHHHTTCC------CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------
T ss_pred ---CCCHHHHHHHHHHHhcC-CCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------
Confidence 99999999999999999 999 99999999999999 9999999999999886 66511
Q ss_pred HHH-hhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecC
Q 038617 303 RKL-LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTK 381 (484)
Q Consensus 303 ~~~-i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 381 (484)
.++ ++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 307 ~~~~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 375 (468)
T 1vlu_A 307 KTAYFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 375 (468)
T ss_dssp HHHHHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred hcccccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 344 55543 4566775 4 689987 7889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhccceeeEEECCCccccCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCC
Q 038617 382 DETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFG-----GVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPW 456 (484)
Q Consensus 382 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~ 456 (484)
|.++++++++++++|+|+||++.. ..+.+||| |+|.||+|++ |++|+++|++.|+|..+.. +.+ |||
T Consensus 376 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py 447 (468)
T 1vlu_A 376 NKANAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDY 447 (468)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-ccc
Confidence 999999999999999999998765 35778999 9999999999 9999999999999988642 455 899
Q ss_pred ch
Q 038617 457 ND 458 (484)
Q Consensus 457 ~~ 458 (484)
++
T Consensus 448 ~~ 449 (468)
T 1vlu_A 448 LG 449 (468)
T ss_dssp --
T ss_pred cc
Confidence 84
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-79 Score=639.11 Aligned_cols=410 Identities=17% Similarity=0.169 Sum_probs=359.7
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+||+..+++..+... .++.+
T Consensus 9 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~-------~~~~~ 81 (464)
T 3k9d_A 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVF-------ASKHV 81 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHH-------HHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHH-------HHHHH
Confidence 46789999999999999999999999999999999999999999999999999999998876534333 33333
Q ss_pred HHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHH----
Q 038617 83 DKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET---- 157 (484)
Q Consensus 83 ~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~---- 157 (484)
..+++.... .......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.|+..++++
T Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 82 YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 333333211 111112345678899999999999999999999999999999999999999999999999986655
Q ss_pred hccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecC-CcCceEEcCCCCCCCHH
Q 038617 158 IPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELG-GKCPAILDTLSSPLDIK 233 (484)
Q Consensus 158 l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelg-G~~p~iV~~~~~daDl~ 233 (484)
+.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+ .+++++++||+ +|+| ||+|+||++ |||++
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~---dADl~ 233 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIER---SANIP 233 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECT---TSCHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECC---CCCHH
Confidence 5677 99999999999 678999999998 999999999984 55677889999 7888 999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHH-------HhhcCCCC--CCCCccccccCHHHHHHHHH
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI-------KKFYGENP--KDSKSISRIINEYHFERLRK 304 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~~--~~~~~~gpli~~~~~~~~~~ 304 (484)
.|++.+++++|+ |+||.|+++++||||+++||+|+++|+++. +.+++|+| ++++++||+++.++++++.+
T Consensus 234 ~Aa~~i~~~~~~-n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~ 312 (464)
T 3k9d_A 234 RAVKHILDSKTF-DNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIAN 312 (464)
T ss_dssp HHHHHHHHHHTG-GGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHH
T ss_pred HHHHHHHHHHhc-CCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHH
Confidence 999999999999 999999999999999999999999999885 44566666 56889999999999999999
Q ss_pred Hhhchhc-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHH----HHHhcCCCCceEEEe
Q 038617 305 LLKDPLV-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI----EFINSRPKPLAIYAF 379 (484)
Q Consensus 305 ~i~~a~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~v~ 379 (484)
+++.+.. ++++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++||
T Consensus 313 ~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 313 LAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp HTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred HhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 9998764 6789988753 567788865 89999999999999999997 799999999999999
Q ss_pred cCCHHHHHHHhhccceeeEEECCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 380 TKDETFKKQIVSGTSSGSLIFNDTLVQ-------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 380 t~d~~~~~~~~~~l~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|.+.++++++++++|+|+||+++.+ ...+.+|||| +.+|.|.++|..|+++|++.|+|...
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999998753 2468999998 88999999999999999999998765
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-80 Score=639.26 Aligned_cols=402 Identities=19% Similarity=0.197 Sum_probs=333.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHc-------CCChh----hhhHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDL-------GKHPV----ETYRDEIGL 70 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~~~----ea~~~ev~~ 70 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+ |||.. ++. .|+..
T Consensus 25 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~-~ev~~ 103 (463)
T 2h5g_A 25 KPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLST-SKLNS 103 (463)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCH-HHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhH-HHHHH
Confidence 4678899999999999999999999999999999999999999999999999999 69987 455 59999
Q ss_pred HHHHHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHH
Q 038617 71 IKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVEC 150 (484)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t 150 (484)
+++.+++++..++++.+... .......+...++.++|+|||++|+||| |.+.+ +++++||++||+||+|||+.+|.+
T Consensus 104 ~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t 180 (463)
T 2h5g_A 104 LAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHS 180 (463)
T ss_dssp HHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHH
T ss_pred HHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHH
Confidence 99999999988777655331 1110012335678999999999999776 76666 799999999999999999999999
Q ss_pred HHHHHHHhcccc----CccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 151 ASFLAETIPLYL----DCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 151 ~~~l~~~l~~al----p~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
+..|++++.+++ |+|++|+++|+.++++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++
T Consensus 181 ~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~~ 258 (463)
T 2h5g_A 181 NRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVDS 258 (463)
T ss_dssp HHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEcC
Confidence 999999999985 6999999999667899999998 999999999999999999887 899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~ 305 (484)
|||++.|++.+++++|. | ||.|++++|||||+++|| ||+ +++ +
T Consensus 259 ---dADl~~Aa~~i~~~~f~-n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~~~---~ 301 (463)
T 2h5g_A 259 ---EASVDKVTRLVRDSKCE-Y-PAACNALETLLIHRDLLR------------------------TPL-----FDQ---I 301 (463)
T ss_dssp ---TCCTTTHHHHHHHHHHS-C-TTSTTSEEEEEEEGGGTT------------------------SHH-----HHH---H
T ss_pred ---CCCHHHHHHHHHHHhcc-C-CCccccCcEEEEeccccc------------------------hHH-----HHH---H
Confidence 99999999999999999 9 999999999999999998 232 222 3
Q ss_pred hhchh-cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 038617 306 LKDPL-VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDET 384 (484)
Q Consensus 306 i~~a~-~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 384 (484)
++++. +|++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 302 i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 373 (463)
T 2h5g_A 302 IDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDEN 373 (463)
T ss_dssp HHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred HHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHH
Confidence 44443 366777444322234442 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhccEEEEecCcCCCCCCCCCCchHH
Q 038617 385 FKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RY--HGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFK 460 (484)
Q Consensus 385 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~ 460 (484)
+++++++++++|+|+||++.. ..+.+||||+|.||+| ++ +|.+|+++|++.|+|+.+.. +.+ |||++.|
T Consensus 374 ~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~~y~~~~ 446 (463)
T 2h5g_A 374 TAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-SDFSEHG 446 (463)
T ss_dssp HHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-GGGSTTS
T ss_pred HHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-CCccccc
Confidence 999999999999999998765 3678999999999999 66 89999999999999988753 455 7887654
Q ss_pred H
Q 038617 461 M 461 (484)
Q Consensus 461 ~ 461 (484)
.
T Consensus 447 ~ 447 (463)
T 2h5g_A 447 S 447 (463)
T ss_dssp S
T ss_pred h
Confidence 3
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-76 Score=612.73 Aligned_cols=390 Identities=18% Similarity=0.198 Sum_probs=322.7
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhHH-------HHHHHHH
Q 038617 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYRD-------EIGLIKK 73 (484)
Q Consensus 5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~-------ev~~~~~ 73 (484)
.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+||+. .++..+ |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999984 355432 5666666
Q ss_pred HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
.+++++...+. . ...........+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.|+..
T Consensus 105 ~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 66665543321 0 11111000112446788999999999999998 8 6889999999999999999999999999999
Q ss_pred HHHHh----ccc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 154 LAETI----PLY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 154 l~~~l----~~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
|++++ .++ +|+|++|+++| +.+ .++.|..|+ ||.|+||||+.+|+.+++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 566 99999999998 554 667777787 99999999999999998866 699999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcC---CCCCCCCccccccCHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYG---ENPKDSKSISRIINEYHFERL 302 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~gpli~~~~~~~~ 302 (484)
|||++.|++.+++++|. |+| .|++++|||||+++||+|+++|+++++++++ |+| ..
T Consensus 258 ---dADl~~Aa~~i~~~~~~-n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p----------------~~ 316 (444)
T 4ghk_A 258 ---RASVTKALTVCDNAKTH-RYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDA----------------DA 316 (444)
T ss_dssp ---TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECH----------------HH
T ss_pred ---CCCHHHHHHHHHHHhcC-CCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCH----------------HH
Confidence 99999999999999999 999 9999999999999999999999999999876 554 12
Q ss_pred HHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 038617 303 RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382 (484)
Q Consensus 303 ~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 382 (484)
.++++++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 317 ~~~i~~a~-------~------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 375 (444)
T 4ghk_A 317 RAVLEAAG-------V------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTED 375 (444)
T ss_dssp HHHHHHTT-------C------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSB
T ss_pred HHHHHhcc-------c------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence 45565442 1 1 11 35678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEecC
Q 038617 383 ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG----RYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 383 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
.++++++++++++|+|+||+++.. .+.+||||.+.||+| +++|++|+++||+.|+|++..+
T Consensus 376 ~~~a~~~a~~l~aG~V~vN~~~~~--~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 376 HDRAMRFLREVDSASVMVNASTRF--ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp HHHHHHHHHHCCSSEEEEEECGGG--CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCcceEEEcCCCcc--CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 999999999999999999998753 578999999999998 6789999999999999988754
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-77 Score=611.37 Aligned_cols=388 Identities=20% Similarity=0.255 Sum_probs=332.4
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhH-------HHHHHHHH
Q 038617 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYR-------DEIGLIKK 73 (484)
Q Consensus 5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~-------~ev~~~~~ 73 (484)
.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+. .++.. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999885 55542 37777777
Q ss_pred HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
.+++++...+. .+ ..........+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++..
T Consensus 93 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 77777654322 11 1100000012334678999999999999986 4 7899999999999999999999999999999
Q ss_pred HHHHhc----cc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 154 LAETIP----LY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 154 l~~~l~----~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
|++++. ++ +|+|++|+++| +.+ .++.|..|+ ||+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999997 55 89999999998 554 567777786 99999999999999999877 599999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~ 305 (484)
|||++.|++.+++++|. |+| .|++++|||||+++||+|+++|++++++++++
T Consensus 246 ---dADl~~Aa~~i~~~~f~-n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------- 297 (427)
T 1o20_A 246 ---SADLKKAVPVIINAKTQ-RPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE----------------------- 297 (427)
T ss_dssp ---TSCHHHHHHHHHHHHHS-CTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------
T ss_pred ---CCCHHHHHHHHHHHhcc-CCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------
Confidence 99999999999999999 998 99999999999999999999999999877531
Q ss_pred hhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 038617 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETF 385 (484)
Q Consensus 306 i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 385 (484)
+.||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 298 ----------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 361 (427)
T 1o20_A 298 ----------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSN 361 (427)
T ss_dssp ----------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred ----------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHH
Confidence 1122211 12 33 885 34578999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEecC
Q 038617 386 KKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG----RYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 386 ~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
++++++++++|+|+||++.. ..+.+||||.|.||+| +++|++|+++|++.|+|+.+..
T Consensus 362 a~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 362 AKKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp HHHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 99999999999999998765 3678999999999997 4679999999999999988753
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-76 Score=610.66 Aligned_cols=410 Identities=15% Similarity=0.148 Sum_probs=334.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+|||..+++..|+..+.+.+
T Consensus 3 ~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~------ 76 (452)
T 3my7_A 3 VTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFI------ 76 (452)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH------
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH------
Confidence 57899999999999999999999999999999999999999999999999999999999998754554443333
Q ss_pred HHHhhcCcccc-CccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc-
Q 038617 82 LDKWMAPKKRR-LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP- 159 (484)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~- 159 (484)
.+++...... ......+...+..++|+|||++|+|||||++++++++++||++||+||+|||+.+|.|+..+++++.
T Consensus 77 -~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 77 -YNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp -HHHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred -HHHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 2233222111 1111223456889999999999999999999999999999999999999999999999999988876
Q ss_pred ---cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617 160 ---LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233 (484)
Q Consensus 160 ---~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~ 233 (484)
++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+++ ++++++||+++|+|||||+||++ |||++
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~---dADl~ 228 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDE---TADIK 228 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECT---TSCHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeC---CCCHH
Confidence 56 99999999999 778999999997 99999999998654 56778999999999999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
.|++.+++++|+ |+||.|+++++||||+++||+|+++|+++ +||++++.+.+++.++++++.. +
T Consensus 229 ~Aa~~iv~s~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~ 293 (452)
T 3my7_A 229 RAVASVLMSKTF-DNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALN 293 (452)
T ss_dssp HHHHHHHHGGGG-GGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEEC
T ss_pred HHHHHHHHHHhC-CCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccC
Confidence 999999999999 99999999999999999999999999764 3899999999999999987643 4
Q ss_pred CceeeCCCcC----CCCCeeeeEE-------EeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCC----CCceEE
Q 038617 313 DAIVHGGLLD----KENLFIEPTI-------LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP----KPLAIY 377 (484)
Q Consensus 313 ~~~~~gg~~~----~~g~~~~Pti-------l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~ 377 (484)
+++ +||... ..|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++
T Consensus 294 a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 294 AKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 454 576532 3589999997 678999999875 89999999999999999999999974 999999
Q ss_pred EecCCHHHHHH---HhhccceeeEEECCCccccC---------CCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 378 AFTKDETFKKQ---IVSGTSSGSLIFNDTLVQQL---------CDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 378 v~t~d~~~~~~---~~~~l~~g~v~iN~~~~~~~---------~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|||+|.+.+++ +++++++|+|+||+++.+.. .+.+++ |.+..|.+...+..+.+++.+.|+|..+
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECC
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEee
Confidence 99999877777 99999999999999754211 111111 2233344444555677788877777654
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.25 Score=49.02 Aligned_cols=337 Identities=15% Similarity=0.154 Sum_probs=175.0
Q ss_pred HhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCC-C------hhhhhHHHHHH--------HHHHHHHHHHHH
Q 038617 18 TFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGK-H------PVETYRDEIGL--------IKKSAKYALSCL 82 (484)
Q Consensus 18 A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk-~------~~ea~~~ev~~--------~~~~~~~~~~~~ 82 (484)
.+..++..+..+-.+..+.+.+-++++.|+-....++..-+ . +.-. ..|+.. ..+.++.+.+++
T Consensus 23 ~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I 101 (423)
T 4gic_A 23 RLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERI 101 (423)
T ss_dssp HHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 33445656666666667777777777766555545544321 1 1111 123332 223455566666
Q ss_pred HHhhcCccccCc--cccCCCcceEEeecceEEEEEccCc---hhHHHHHhHHHHHHhhCCE-EE-EeCCcccHHHHHHHH
Q 038617 83 DKWMAPKKRRLP--LLFFPASGEVVSEPFGVVLICSAWN---FPINLALEPLIGAIAAGNT-VM-LKPSELAVECASFLA 155 (484)
Q Consensus 83 ~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~i~~ALaaGN~-Vv-lkps~~~~~t~~~l~ 155 (484)
+.+...+..... ....+.....++.|+--|++..|.- ||-. ++..++||-.+|+. +| .-|.+........|+
T Consensus 102 ~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~ 180 (423)
T 4gic_A 102 RAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVLA 180 (423)
T ss_dssp HHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH
T ss_pred HHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHHH
Confidence 666544332211 1223455677889999999999944 6644 44467899999986 33 345443211112222
Q ss_pred HHhccccCccceeecc-CChhHHHHHH---hC--CCCeEEEeCChHHHHHHHHHHhcccCceeeec-CCcC--ceEEcCC
Q 038617 156 ETIPLYLDCKAIKVTN-GGVDVCEQLL---QQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGKC--PAILDTL 226 (484)
Q Consensus 156 ~~l~~alp~g~v~~v~-g~~~~~~~L~---~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~--p~iV~~~ 226 (484)
.+ +.+ |+=.+.. |+.....+|. +. +||.|+=.|..-+..+=..... .+-..+ .|.+ -+|-|+
T Consensus 181 AA-~l~---Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~- 251 (423)
T 4gic_A 181 AA-YIS---GVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDG- 251 (423)
T ss_dssp HH-HHH---TCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECS-
T ss_pred HH-Hhc---CCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCC-
Confidence 11 111 2112222 3434434443 11 4999999998766543222211 122222 2333 344455
Q ss_pred CCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHh
Q 038617 227 SSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLL 306 (484)
Q Consensus 227 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i 306 (484)
++|.+..+..++.-+=. ... .+.++|..+ ++|.+++.+++.+..-.-| ..+..++-+
T Consensus 252 --~a~p~~vAaDLlsQAEH-d~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~-------------r~~i~~~sl 308 (423)
T 4gic_A 252 --RTDPDWIAMDLFSQAEH-DED-----AQAILISPD--AAHLEAVQASIERLLPGME-------------RAEVIRTSL 308 (423)
T ss_dssp --CSCHHHHHHHHHHHHTT-CTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT-------------THHHHHHHH
T ss_pred --CCCHHHHHHHHHHhhcc-CCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-------------cHHHHHHHH
Confidence 79999999999888754 322 234566555 4555555555543210000 001111111
Q ss_pred hchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 038617 307 KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFK 386 (484)
Q Consensus 307 ~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 386 (484)
+ -+| .++.++|++|+++++|..-- =-.-|.++|...
T Consensus 309 ~---------------------------------------~~g---~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~~- 344 (423)
T 4gic_A 309 E---------------------------------------RRG---GMILVDDLEQAAAVANRIAP-EHLELSVESPEV- 344 (423)
T ss_dssp H---------------------------------------HHC---EEEECSSHHHHHHHHHHHCC-SEEEEESSCHHH-
T ss_pred h---------------------------------------cCc---eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHHH-
Confidence 1 111 34457999999999999422 246678888764
Q ss_pred HHHhhccc-eeeEEECCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 387 KQIVSGTS-SGSLIFNDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 387 ~~~~~~l~-~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
+..+++ +|.|++...+.-. .+..+|- +|..++.+..+...|...-+
T Consensus 345 --~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s 398 (423)
T 4gic_A 345 --LVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSS 398 (423)
T ss_dssp --HGGGCCCCSEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEE
T ss_pred --HHhhCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeee
Confidence 556665 8999998754211 1223343 34566667777889984433
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.65 Score=46.17 Aligned_cols=326 Identities=15% Similarity=0.180 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCC----hhhhhHHHHH--------HHHHHHHHHHHHHHHhhcCccccC-c
Q 038617 28 AWRKNQLRALIELLQDNEDKIFKALHQDLGKH----PVETYRDEIG--------LIKKSAKYALSCLDKWMAPKKRRL-P 94 (484)
Q Consensus 28 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~ea~~~ev~--------~~~~~~~~~~~~~~~~~~~~~~~~-~ 94 (484)
.+-....+.+.+-++++.|+-....++...+- +.-+ ..|+. ...+.++.+.++++.+...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 34445566666666666665555454443321 1111 12333 234455666777777765553321 1
Q ss_pred c-ccCCCcceEEeecceEEEEEccC---chhHHHHHhHHHHHHhhCCEEEEe--CCcccHHHHHHHHHHhccccCcccee
Q 038617 95 L-LFFPASGEVVSEPFGVVLICSAW---NFPINLALEPLIGAIAAGNTVMLK--PSELAVECASFLAETIPLYLDCKAIK 168 (484)
Q Consensus 95 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~i~~ALaaGN~Vvlk--ps~~~~~t~~~l~~~l~~alp~g~v~ 168 (484)
. ...|.....++.|+--|++..|. -||- +.+...+||-.+|+.=|+- |..-.|.+ ..-+.++ |+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i-L~AA~l~------Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI-LYAAQLC------GVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH-HHHHHHT------TCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH-HHHHHHc------CCCE
Confidence 1 12244556788999999999996 4664 4455678999999875543 43223322 1111111 1112
Q ss_pred ecc-CChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CCcC--ceEEcCCCCCCCHHHHHHHH
Q 038617 169 VTN-GGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGKC--PAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 169 ~v~-g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~--p~iV~~~~~daDl~~aa~~i 239 (484)
+.. |+.....+|. +. + ||+|+=.|..-+..+=....... ..+-..+ .|.+ -+|-|+ +||.+..+.++
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~-G~VgIDm~AGPSEilViAD~---tAnp~~vAaDL 256 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADS---GATPDFVASDL 256 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT-TSCEESCCCCCCEEEEEECT---TSCHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc-CccccCCCCCCceEEEEeCC---CCCHHHHHHHH
Confidence 222 3434334443 12 3 99999888776543211110001 1122222 2333 344466 89999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCC
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGG 319 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg 319 (484)
+.-+=. .. . .+.++|..+ ++|.+++.+++.+....-| .. +.+
T Consensus 257 LsQAEH-d~----~-a~aiLvT~s--~~la~~V~~ev~~ql~~lp-------------r~----~ia------------- 298 (434)
T 1kae_A 257 LSQAEH-GP----D-SQVILLTPA--ADMARRVAEAVERQLAELP-------------RA----ETA------------- 298 (434)
T ss_dssp HHHHTT-CT----T-CEEEEEESC--HHHHHHHHHHHHHHHTTCT-------------TH----HHH-------------
T ss_pred HHHhcc-CC----C-CcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------hH----HHH-------------
Confidence 888754 22 2 234555554 4455555444443210000 00 111
Q ss_pred CcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc-eeeE
Q 038617 320 LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS-SGSL 398 (484)
Q Consensus 320 ~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~g~v 398 (484)
++-+..- .|+.++|++||++++|..-- =-.-|.++|+.. +..+++ +|.|
T Consensus 299 -------------------------~~sl~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~~---~l~~I~nAGaI 348 (434)
T 1kae_A 299 -------------------------RQALNAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNARE---LVDSITSAGSV 348 (434)
T ss_dssp -------------------------HHHHTTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHHH---HGGGCCSCSEE
T ss_pred -------------------------HHHHHcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHHH---HHhhcCcccch
Confidence 1111222 45678999999999999532 256788988853 555555 8999
Q ss_pred EECCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 399 IFNDTLVQ-------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 399 ~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
++...+.- ..+..+|-+| ..|+.+..+...|..+-+
T Consensus 349 FlG~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s 391 (434)
T 1kae_A 349 FLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMT 391 (434)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEE
T ss_pred hcCCCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceee
Confidence 99975421 1244555555 456666677889985443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 484 | ||||
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 9e-95 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-87 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-86 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-84 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 6e-70 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-59 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 3e-58 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-50 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-29 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-18 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 4e-10 |
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 292 bits (747), Expect = 9e-95
Identities = 190/450 (42%), Positives = 275/450 (61%), Gaps = 10/450 (2%)
Query: 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE 67
I D + R+ F SG T+S+ +R QL AL ++ +N I AL DLGK+ +Y +E
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALE 127
+ + + + L W + + SEP GVVL+ AWN+P NL ++
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNK 187
P++GA+AAGN V+LKPSE++ A LA IP Y+D V GGV +LL+++++
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDH 181
Query: 188 IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
I +TGS VG IVM+AAAKHLTPVTLELGGK P +D D+ V +RI GKF +
Sbjct: 182 IMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDC---DLDVACRRIAWGKFMN- 237
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307
+GQ CV DYIL + ++E LK ++K FYGE+ K S+ RIIN+ HF+R++ L+
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLID 297
Query: 308 DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
+ + HGG D+ + +I PTIL+D + +M EEIFGP++PI+ + +++E+I+FI
Sbjct: 298 NQ----KVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFI 353
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
N R KPLA+Y F+ +E K++++ TSSG + ND +V LPFGGVG SG+G YHG
Sbjct: 354 NQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHG 413
Query: 428 HYSFETFSHEKAIMQRSFFLE--LEPRYPP 455
SFETFSH ++ + +S E + RYPP
Sbjct: 414 KKSFETFSHRRSCLVKSLLNEEAHKARYPP 443
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 273 bits (698), Expect = 8e-87
Identities = 111/446 (24%), Positives = 182/446 (40%), Gaps = 18/446 (4%)
Query: 7 EIEDKLAELRQTFRSGI---TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVET 63
+++ + RQ F+ G T + R L L +L++ + + + GK
Sbjct: 52 DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNA 111
Query: 64 YRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPIN 123
Y ++G K+ +Y DK R + SEP GV WNFP+
Sbjct: 112 YLMDLGGCIKTLRYCAGWADKIQG----RTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLL 167
Query: 124 LALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNGGVDVCEQLL- 181
+ L + A++ GNTV++KP+E A + I + + G +
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 227
Query: 182 -QQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239
+K+ FTGS VG ++ AA K +L V+LELGGK P I+ + D+ V+
Sbjct: 228 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVF---ADADLDNAVEFA 284
Query: 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHF 299
G F + E + + S++ K G S I++ +
Sbjct: 285 HQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQY 344
Query: 300 ERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITL 357
E++ L++ A + GG + FI+PT+ D D I EEIFGP+ I+
Sbjct: 345 EKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF 404
Query: 358 NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGV 417
++ + I+ N+ L+ FT D + S SG++ N V + PFGG
Sbjct: 405 KSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGF 462
Query: 418 GQSGIGRYHGHYSFETFSHEKAIMQR 443
SG GR G Y F ++ K + +
Sbjct: 463 KMSGNGRELGEYGFHEYTEVKTVTIK 488
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 271 bits (693), Expect = 5e-86
Identities = 105/446 (23%), Positives = 180/446 (40%), Gaps = 18/446 (4%)
Query: 7 EIEDKLAELRQTFRSGI---TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVET 63
+++ + R F+ G + R L L +L++ + + D GK V +
Sbjct: 52 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 111
Query: 64 YRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPIN 123
Y ++ ++ K +Y DK+ + + EP GV WNFP+
Sbjct: 112 YLVDLDMVLKCLRYYAGWADKYHG----KTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 167
Query: 124 LALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNG-GVDVCEQLL 181
+ L A+A GN V++K +E A ++A I + + G G +
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227
Query: 182 Q-QKWNKIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239
+ +K+ FTGS +G ++ +A + +L VTLELGGK P I+ S D+ V++
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIM---SDADMDWAVEQA 284
Query: 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHF 299
F + C G + E + + S+ + G ++E F
Sbjct: 285 HFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQF 344
Query: 300 ERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITL 357
+++ + A + GG+ FI+PT+ D I EEIFGP++ I+
Sbjct: 345 KKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF 404
Query: 358 NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGV 417
I+E + N+ LA FTKD + +G++ N V PFGG
Sbjct: 405 KTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGY 462
Query: 418 GQSGIGRYHGHYSFETFSHEKAIMQR 443
SG GR G Y + ++ K + +
Sbjct: 463 KMSGSGRELGEYGLQAYTEVKTVTVK 488
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 266 bits (681), Expect = 3e-84
Identities = 99/456 (21%), Positives = 179/456 (39%), Gaps = 28/456 (6%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E++ + + + + R + ++++ D I K + GK E D
Sbjct: 59 EVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYD 118
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSE---PFGVVLICSAWNFPIN 123
A C++ + G P GV AWN+P
Sbjct: 119 --------IDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFM 170
Query: 124 LALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNGGVDVCEQLLQ 182
+A A+A GN V+ KPS + LAE + + V GG + L
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCH 230
Query: 183 QK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241
K+ FTGS G VM +AK + VTLELGGK P ++ +++ V+ +
Sbjct: 231 HPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIF---KDCELENAVRGALM 287
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHFE 300
F GQVC + V+++ +E + K G+ + +I++ +
Sbjct: 288 ANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLD 346
Query: 301 RLRKLLKDPLVADA-IVHGG-------LLDKENLFIEPTILLDPPLDAEIMTEEIFGPIL 352
++ + A ++ GG K F+ P +L + D + EEIFGP++
Sbjct: 347 KVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVM 406
Query: 353 PIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVL 412
++ + +E ++ N+ LA FT+D + ++ + +G+ N + +
Sbjct: 407 SVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISP--VEV 464
Query: 413 PFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLE 448
PFGG SG GR +G + + +S K ++ ++
Sbjct: 465 PFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 228 bits (582), Expect = 6e-70
Identities = 101/443 (22%), Positives = 175/443 (39%), Gaps = 15/443 (3%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
+++ + F + R L L +++++N + ++ GK + D
Sbjct: 40 QVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 99
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
EI I ++ + + +P GVV + WN+P+ +A
Sbjct: 100 EIPAIVDVFRF---FAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAA 156
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNG-GVDVCEQLLQQ-K 184
L A+AAGN V+LKPSE+ A LAE + + G G V + L K
Sbjct: 157 WKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPK 216
Query: 185 WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF 244
+ TGS G ++S A + +ELGGK P I+ V +
Sbjct: 217 VRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVF----DDADIEAVVEGVRTFG 272
Query: 245 ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFERLR 303
GQ C I +K TL+E L + G +S + + + H ER+
Sbjct: 273 YYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVG 332
Query: 304 KLLKDPLVADA--IVHGGLLDKEN-LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNI 360
K +++ ++ GG K N + PT+L D I+ +E+FGP++ + +N
Sbjct: 333 KAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392
Query: 361 QESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQS 420
++ + + N LA +TKD ++ + G N + L +P GG S
Sbjct: 393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLS 450
Query: 421 GIGRYHGHYSFETFSHEKAIMQR 443
G G+ Y E ++ + +M +
Sbjct: 451 GYGKDMSLYGLEDYTVVRHVMVK 473
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 199 bits (506), Expect = 6e-59
Identities = 115/440 (26%), Positives = 190/440 (43%), Gaps = 14/440 (3%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E++ A ++ + S R L + ++L +++KI L +++ K ++
Sbjct: 40 EVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAK-GYKSAVS 98
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGE--VVSEPFGVVLICSAWNFPINL 124
E+ + YA + V EP G+VL S +N+P+NL
Sbjct: 99 EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 158
Query: 125 ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP-LYLDCKAIK-VTNGGVDVCEQLLQ 182
A + A+ AGN + KP LAE L +T G ++ + +++
Sbjct: 159 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVE 218
Query: 183 -QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241
Q N I FTGS +G + A + P+ LELGGK AI+ + D+++T K II
Sbjct: 219 HQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDA---DLELTAKNIIA 273
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301
G F +GQ C V +LV + A L+E ++ + NP+D I+ +I+ +
Sbjct: 274 GAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADY 332
Query: 302 LRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ 361
+ L+ D A + +E I P + D + EE FGP+LPII + +++
Sbjct: 333 VEGLINDANDKGATALTEI-KREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 391
Query: 362 ESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
E+IE N L FT D I G++ N+ Q+ D PF G +SG
Sbjct: 392 EAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSG 450
Query: 422 IGRYHGHYSFETFSHEKAIM 441
G YS E + K+++
Sbjct: 451 AGIQGVKYSIEAMTTVKSVV 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 198 bits (504), Expect = 3e-58
Identities = 102/448 (22%), Positives = 181/448 (40%), Gaps = 18/448 (4%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E E L + F++ R L L++ + ++ L ++GK+ VE D
Sbjct: 75 EAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASAD 134
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLAL 126
I YA + L + + E P G ++ + WNFP+ +
Sbjct: 135 VAEAIDFIEYYARAALRYRYPAVEVVP---YPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191
Query: 127 EPLIGAIAAGNTVMLKPSELAVECASFLAETIP-LYLDCKAIKVTNG-GVDVCEQLLQQ- 183
++G +A GNTV+ KP+E AV + + E + G G +V L++
Sbjct: 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHP 251
Query: 184 KWNKIFFTGSPRVGSIVMSAA------AKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237
+ I FTGS VG + AA +E GGK I+D + D + +
Sbjct: 252 RIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETA---DFDLAAE 308
Query: 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEY 297
++ + GQ C +++ + ++E + ++ +++ + +++
Sbjct: 309 GVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAE 367
Query: 298 HFERLRKLLKDPLVADAIVHGG-LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
++ ++ +V GG L+ E FI PT+ + P A I EEIFGP+L +I
Sbjct: 368 QERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGG 416
+ + E++E N P L +++ + G+L FN + L V PFGG
Sbjct: 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGG 487
Query: 417 VGQSGIGRYHGHYSF-ETFSHEKAIMQR 443
SG G + F KA+ +R
Sbjct: 488 FKLSGTNAKTGALDYLRLFLEMKAVAER 515
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 177 bits (449), Expect = 1e-50
Identities = 94/444 (21%), Positives = 171/444 (38%), Gaps = 14/444 (3%)
Query: 7 EIEDKLAELRQTFR-SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
E+E L L + R S R LR ++++ N D + L + GK
Sbjct: 53 EVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVG 112
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
+ + + L G V EP GVV + +N+P+ A
Sbjct: 113 EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA 172
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTN--GGVDVCEQLLQQ 183
+ + + GN V++KPS A+ + + G + + +
Sbjct: 173 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADD 232
Query: 184 KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGK 243
+ + FTGS VG V+ + +ELGG PAI+ D+ + +I G
Sbjct: 233 RVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVL---EDADLDLAADKIARGI 287
Query: 244 FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERL 302
+ S GQ C + +L E+ L+E + + +P+D + +I+ + +
Sbjct: 288 Y-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEM 346
Query: 303 RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPL---DAEIMTEEIFGPILPIITLNN 359
++D + V G +++PT++ P D + E+F P+ + + +
Sbjct: 347 MAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKD 406
Query: 360 IQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQ 419
+ ++IE N RP L F +D ++ V G++ ND + PFGG +
Sbjct: 407 LDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGI-GYYPFGGRKK 465
Query: 420 SGIGRYHGHYSFETFSHEKAIMQR 443
SG+ R Y+ E + K I+
Sbjct: 466 SGVFREGIGYAVEAVTAYKTIVFN 489
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 117 bits (294), Expect = 1e-29
Identities = 72/453 (15%), Positives = 139/453 (30%), Gaps = 60/453 (13%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGK----HPVE 62
E+ +K ++R+ + + + ++ + E L + +I +A D+ K E
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 63 TYRDEIGLIKKSAKYALSCLDKWMAPKKRRL---PLLFFPASGEVVSEPFGVVLICSAWN 119
+ D + L K + + + K + + I +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE 121
Query: 120 FPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQ 179
N+ +E I A+ +GNT++L+ A+ + I L I ++
Sbjct: 122 SRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 181
Query: 180 LLQQKW----NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235
+ PR G ++S + T LE G I S+ D+K
Sbjct: 182 RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESA--DLKKA 239
Query: 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIIN 295
V II K C + +LV +K A + + ++K E K
Sbjct: 240 VPVIINAKT--QRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEK------- 290
Query: 296 EYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPII 355
+ P + E I+ I
Sbjct: 291 --------------------------------TREIVPDVVPATEDDWPTEYLDLIIAIK 318
Query: 356 TLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFG 415
+ N+ E+IE I + T++ + K+ VS + ++ N + + D FG
Sbjct: 319 VVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNAST--RFTDGGQFG 376
Query: 416 GVGQSGIGR----YHGHYSFETFSHEKAIMQRS 444
+ GI G + K ++
Sbjct: 377 FGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 84.8 bits (208), Expect = 3e-18
Identities = 61/458 (13%), Positives = 120/458 (26%), Gaps = 31/458 (6%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
E+ + R + + R + LR + L+ D I H + P
Sbjct: 27 EVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL-PEVRLTG 85
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRR-------LPLLFFPASGEVVSEPFGVVLICSAWN 119
EI + ++ + PL + ++ V S +
Sbjct: 86 EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFP 145
Query: 120 FPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-------PLYLDCKAIKVTNG 172
+ A A+AAG V++K + +AE I L + N
Sbjct: 146 LAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQ 205
Query: 173 GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDI 232
+ + + FTGS G + + A + P+ S +
Sbjct: 206 RALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRA 265
Query: 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISR 292
K + GQ C + ++ + + +
Sbjct: 266 KADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLT----P 321
Query: 293 IINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPIL 352
I + + ++ D + + EEIFGP
Sbjct: 322 GIRDSYQSQVVSRGSDDGIDVTFSQAE--SPCVASALFVTSSENWRKHPAWEEEIFGPQS 379
Query: 353 PIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK--QIVSG--TSSGSLIFNDTLV--- 405
I+ N+ + + L +E + + Q++ +G L+FN
Sbjct: 380 LIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVE 439
Query: 406 --QQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
+ P+ S G + + A
Sbjct: 440 VGYAMVHGGPYPASTHSA-STSVGAEAIHRWLRPVAYQ 476
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.5 bits (143), Expect = 4e-10
Identities = 58/458 (12%), Positives = 138/458 (30%), Gaps = 52/458 (11%)
Query: 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDL----GKHP 60
M + R+ T S R + L + + L+ N I +A DL
Sbjct: 2 MSSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGL 61
Query: 61 VETYRDEIGLIK----KSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICS 116
++ + L K + + + + P + + V ++
Sbjct: 62 ADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLV 121
Query: 117 AWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDV 176
+ + +I +GN +LK + +V +A+ + + + T V
Sbjct: 122 IFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTI-AQFQSETGVPVGS 180
Query: 177 CEQLLQQKWNKIFFTGSPRVGSIVMSAAAK--------HLTPVTLELGGKCPAILDTLSS 228
+ + ++ + +V + PV G C LD +
Sbjct: 181 VQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDAD 240
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
+ K + + K C ++ +L+ KF+ T++
Sbjct: 241 LIKAK---RISLDAKTN--YPAGCNAMETLLINPKFSKWWEVLENLTLEG---------- 285
Query: 289 SISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIF 348
+ + + L+ D L + + K + + +E
Sbjct: 286 ----GVTIHATKDLKTAYFDKLNELGKLTEAIQCK----------TVDADEEQDFDKEFL 331
Query: 349 GPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQL 408
L + + + +I+ IN+ T+++ ++ + G S + +N + +
Sbjct: 332 SLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAS--TRF 389
Query: 409 CDVLPFGGVGQSGI--GRYH--GHYSFETFSHEKAIMQ 442
D +G + GI + H G + + ++
Sbjct: 390 ADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIR 427
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.95 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=3.8e-94 Score=754.03 Aligned_cols=433 Identities=26% Similarity=0.367 Sum_probs=403.4
Q ss_pred CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA 78 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 78 (484)
.++.+|+++|+++|++||+ +|+++|.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++
T Consensus 47 ~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~ 126 (494)
T d1bxsa_ 47 EGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYC 126 (494)
T ss_dssp CCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHH
Confidence 4789999999999999996 6999999999999999999999999999999999999999987666899999999999
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
+...+++.... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.+|++++
T Consensus 127 a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~ 202 (494)
T d1bxsa_ 127 AGWADKIQGRT----IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLI 202 (494)
T ss_dssp HHHGGGCCEEE----ECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH
T ss_pred hhhhhhhccee----ecCCCCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHH
Confidence 88776543221 11223446788999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+|+| +.+.++.|++|+ ||+|.||||+.+|+.|++.++. ++||+++|+|||||+||++ |||++.
T Consensus 203 ~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~---dadl~~ 279 (494)
T d1bxsa_ 203 KEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA---DADLDN 279 (494)
T ss_dssp HHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT---TSCHHH
T ss_pred HHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECc---CcchhH
Confidence 999 99999999999 567889999997 9999999999999999998875 6899999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |
T Consensus 280 a~~~i~~~~~~-~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 358 (494)
T d1bxsa_ 280 AVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 358 (494)
T ss_dssp HHHHHHHHHHT-TTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHhc-CCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999 99999999999999999999999999999999999999 899999999999999999999999874 7
Q ss_pred CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 359 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~ 438 (494)
T d1bxsa_ 359 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSS 438 (494)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHH
Confidence 788888865 4579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 439 ~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~ 489 (494)
T d1bxsa_ 439 ALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 489 (494)
T ss_dssp HSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred hCCEeEEEEcCCCC--cCCCCCcCccccccCChhhHHHHHHHhcceEEEEEec
Confidence 99999999998765 4678999999999999999999999999999999875
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.2e-93 Score=750.49 Aligned_cols=435 Identities=23% Similarity=0.334 Sum_probs=409.2
Q ss_pred CCCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 1 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
+.++.+|+++|+++|++||+.|++++..+|.++|++++++|++++++|+++++.|+|||..++.. |+..+++.+++++.
T Consensus 53 ~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~ 131 (503)
T d1a4sa_ 53 VPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAG 131 (503)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhccccccc
Confidence 45789999999999999999999999999999999999999999999999999999999999985 99999999999988
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
..+...... .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 132 ~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ 207 (503)
T d1a4sa_ 132 LAPTLSGQH----IQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHE 207 (503)
T ss_dssp HGGGCCEEE----EECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred ccccccccc----cccCCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 776543322 1122345678999999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 161 Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 161 a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+ +|+|++|+|+|+.+.++.|++|+ ||+|.||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 208 aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~---dAdl~~a~~~ 284 (503)
T d1a4sa_ 208 AGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFK---DCELENAVRG 284 (503)
T ss_dssp TTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred hCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCcEEEECCCcCcEEECC---CccHHHHhhh
Confidence 8 99999999999889999999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|+|||++++++|++++.+.+.++++|+| ++.+++||++++.++++++++++++.. |++++
T Consensus 285 i~~~~~~-~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~ 363 (503)
T d1a4sa_ 285 ALMANFL-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVL 363 (503)
T ss_dssp HHHTTCG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred hhcchhc-cCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999874 78999
Q ss_pred eCCCcC-------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 317 HGGLLD-------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 317 ~gg~~~-------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus 364 ~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~ 443 (503)
T d1a4sa_ 364 CGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRV 443 (503)
T ss_dssp ECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHH
T ss_pred ECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence 998641 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCc
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFF 446 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 446 (484)
++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+|+++||+.|+|+++.+.
T Consensus 444 ~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~ 498 (503)
T d1a4sa_ 444 AANLEAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGD 498 (503)
T ss_dssp HHHSCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCSC
T ss_pred HHhCCeeEEEEeCCCCC--CCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCCC
Confidence 99999999999997763 57899999999999999999999999999999998653
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.8e-93 Score=740.39 Aligned_cols=433 Identities=23% Similarity=0.360 Sum_probs=395.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+|||..++...++..+....+++...
T Consensus 35 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~ 114 (474)
T d1wnda_ 35 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA 114 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccccccccccc
Confidence 57899999999999999999999999999999999999999999999999999999999999765666555555554443
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
...... . .......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++++++
T Consensus 115 ~~~~~~-~--~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~ 191 (474)
T d1wnda_ 115 ARCLNG-L--AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI 191 (474)
T ss_dssp TTCCEE-E--CBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT
T ss_pred cccccc-c--ccccccCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh
Confidence 322111 1 1111223456788999999999999999999999999999999999999999999999999999999988
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ ||+|.||||+++|+.|.+.+++++||+++|||||||+||++ |||++.|++.+
T Consensus 192 lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~~k~~~lElgG~~p~iV~~---dad~~~a~~~i 268 (474)
T d1wnda_ 192 FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFD---DADIEAVVEGV 268 (474)
T ss_dssp SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECT---TSCHHHHHHHH
T ss_pred CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcCCCeEEEEcCCCCceEEcC---chhhhhhhhhh
Confidence 99999999999 567899999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC-cee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD-AIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~-~~~ 316 (484)
++++|. |+||.|++++|+|||+++||+|+++|++.+++++.|+| ++++++||++++.+.+++.++++++.. ++ .++
T Consensus 269 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~ 347 (474)
T d1wnda_ 269 RTFGYY-NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVI 347 (474)
T ss_dssp HHHTTG-GGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEE
T ss_pred hhhccc-CCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999875 55 455
Q ss_pred eCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
.|+.. ...|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++
T Consensus 348 ~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~ 427 (474)
T d1wnda_ 348 TGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQY 427 (474)
T ss_dssp ECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCS
T ss_pred eCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCc
Confidence 66554 35789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 428 g~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 428 GCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp SEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred cEEEEeCCCC--ccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 9999998765 467899999999999999999999999999999886
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=3.5e-93 Score=746.23 Aligned_cols=433 Identities=24% Similarity=0.350 Sum_probs=403.1
Q ss_pred CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA 78 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 78 (484)
.++.+|+++|+++|++||+ .|+++++++|.++|+++++.|++++++|++++++|+|||..++...|+..++..++++
T Consensus 47 ~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~ 126 (494)
T d1o04a_ 47 EGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126 (494)
T ss_dssp CBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHH
Confidence 4789999999999999985 6999999999999999999999999999999999999999998766999999999999
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
+...+++.... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.+|++++
T Consensus 127 a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~ 202 (494)
T d1o04a_ 127 AGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLI 202 (494)
T ss_dssp HHHTTTCCEEE----ECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHHHhcCce----eccCCCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHH
Confidence 88776543221 11223446788999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+|+| +.+.++.|++|+ ||.|.||||+++|+.|++.++ +++||+++|||||||+||++ |||+|.
T Consensus 203 ~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~---dAdl~~ 279 (494)
T d1o04a_ 203 KEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS---DADMDW 279 (494)
T ss_dssp HHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT---TSCHHH
T ss_pred HHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEcc---CccHHH
Confidence 998 99999999999 567899999998 999999999999999988775 78999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++++|||++++|+|++.|.+++.++++|+| ++++++||++++.+++++.++++++.+ |
T Consensus 280 a~~~i~~~~~~-~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 358 (494)
T d1o04a_ 280 AVEQAHFALFF-NQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEG 358 (494)
T ss_dssp HHHHHHHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHhhhhhccc-cCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999998 888999999999999999999999875 6
Q ss_pred CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||... ++|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 359 a~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~ 438 (494)
T d1o04a_ 359 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQ 438 (494)
T ss_dssp CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHH
Confidence 8999998753 568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 439 ~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~ 489 (494)
T d1o04a_ 439 ALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 489 (494)
T ss_dssp HCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred hCCeeEEEEcCCCC--CCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeC
Confidence 99999999998765 3578999999999999999999999999999998874
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.3e-92 Score=742.67 Aligned_cols=435 Identities=23% Similarity=0.354 Sum_probs=403.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..++..+++++..
T Consensus 70 ~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 148 (516)
T d1uzba_ 70 KAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARA 148 (516)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999974 999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
...+...... .....+......++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++.++
T Consensus 149 ~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a 226 (516)
T d1uzba_ 149 ALRYRYPAVE--VVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA 226 (516)
T ss_dssp HGGGCSSCCC--CCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHhhhhcccc--cccccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHh
Confidence 8776443221 11122345678899999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------cccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA------KHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.++.|++|+ ||+|.||||+.+|+.|++.++ .++||+++|+|||||+||++ |||+
T Consensus 227 glP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~---dAd~ 303 (516)
T d1uzba_ 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDE---TADF 303 (516)
T ss_dssp TCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECT---TSCH
T ss_pred CcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeec---chhH
Confidence 99999999999 567899999997 999999999999999999887 67899999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcC
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVA 312 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 312 (484)
+.|++.+++++|. |+||.|++++|+|||++++|+|++++.++++++++|+.++++++||++++.+++++.++++++.+.
T Consensus 304 ~~aa~~i~~~~~~-~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 382 (516)
T d1uzba_ 304 DLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNE 382 (516)
T ss_dssp HHHHHHHHHHHHG-GGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhhhhcc-cCCCcccccCccccccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHHHHHHHC
Confidence 9999999999999 999999999999999999999999999999999988668889999999999999999999999876
Q ss_pred CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+.+++||.. +.+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 383 Ga~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~ 462 (516)
T d1uzba_ 383 GQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARR 462 (516)
T ss_dssp SEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHH
T ss_pred CCEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHH
Confidence 677777764 4579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcch-HHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG-HYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g-~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||+++.+...+.+||||+|.||+|+++| .+++++||+.|+|..+
T Consensus 463 ~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r 515 (516)
T d1uzba_ 463 EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred hCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEc
Confidence 999999999998776667899999999999999875 7899999999999864
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-91 Score=723.91 Aligned_cols=441 Identities=43% Similarity=0.754 Sum_probs=407.0
Q ss_pred HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038617 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMA 87 (484)
Q Consensus 8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 87 (484)
|++|+++||+||++|+.+|.++|.++|++++++|++++++|+++++.|+||+..++...|+..+++.++++++.+..+..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999999999999999999999999999999877999999999999999988876
Q ss_pred CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccce
Q 038617 88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI 167 (484)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v 167 (484)
++.........+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.+.+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~~~~~~~ 161 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLY 161 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHSCTTTE
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccccccccc
Confidence 65443333334456788999999999999999999999999999999999999999999999999999999888999999
Q ss_pred eeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccC
Q 038617 168 KVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247 (484)
Q Consensus 168 ~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~ 247 (484)
+++.|.......+..+++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+++++|. |
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~---dADl~~Aa~~iv~~~~~-~ 237 (446)
T d1ad3a_ 162 LVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDK---DCDLDVACRRIAWGKFM-N 237 (446)
T ss_dssp EECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECS---SSCHHHHHHHHHHHHHT-T
T ss_pred ccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEec---CCchHHHHHHHHHHHhc-C
Confidence 9999877766667666699999999999999999999999999999999999999999 99999999999999999 9
Q ss_pred CCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCC
Q 038617 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENL 326 (484)
Q Consensus 248 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~ 326 (484)
+||.|++++|||||++++|+|+++|.+.++.+. |++ ++++++||++++.+.+++..+++++ +...|+..+..++
T Consensus 238 ~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~-g~~~~~~~~~gp~i~~~~~~~~~~~~~~a----~~~~g~~~~~~~~ 312 (446)
T d1ad3a_ 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFY-GEDAKQSRDYGRIINDRHFQRVKGLIDNQ----KVAHGGTWDQSSR 312 (446)
T ss_dssp TTCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTSCCCSCHHHHHHHHHTTTTS----CEEECCCEETTTT
T ss_pred CCCccccCCccccccchhHHHHHhhhhhhheee-cccccccccccchhhhhhhhhhhccccch----hcccceeecCCCC
Confidence 999999999999999999999999999998884 555 8899999999999999999988754 3444555556788
Q ss_pred eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccc
Q 038617 327 FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQ 406 (484)
Q Consensus 327 ~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 406 (484)
|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.+
T Consensus 313 ~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~ 392 (446)
T d1ad3a_ 313 YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVH 392 (446)
T ss_dssp EECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGG
T ss_pred CcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCC--CCCCCCCCc
Q 038617 407 QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLE--LEPRYPPWN 457 (484)
Q Consensus 407 ~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~--~~~~~~p~~ 457 (484)
...+.+||||+|.||+|+++|.+|+++||+.|+|++++++.+ ..++||||.
T Consensus 393 ~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~~ 445 (446)
T d1ad3a_ 393 ITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSP 445 (446)
T ss_dssp GGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCCCCCTTGGGSSSCC
T ss_pred CCCCCCCccccccceeccchHHHHHHHHhceeEEEEccCCCCccccccCCCCC
Confidence 678899999999999999999999999999999999886654 568999985
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.2e-84 Score=682.92 Aligned_cols=434 Identities=23% Similarity=0.317 Sum_probs=393.7
Q ss_pred CCCHHHHHHHHHHHHHHhH-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR-SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++|+++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.
T Consensus 48 ~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~ 126 (499)
T d1ky8a_ 48 SPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAEL 126 (499)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGG
T ss_pred CCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhh
Confidence 4789999999999988887 79999999999999999999999999999999999999999997 499999999999888
Q ss_pred HHHHhhcCcccc-CccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 81 CLDKWMAPKKRR-LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
.++++....... ......+...+++|+|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~ 206 (499)
T d1ky8a_ 127 DLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL 206 (499)
T ss_dssp GGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH
T ss_pred hhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhhhhhhccccc
Confidence 776654322111 1111223456889999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 160 LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
++ +|+++++++.++.+.+..|++|+ ++.+.||||+.+++.+.+.++ .+|+++|+|||||+||++ |||++.|++
T Consensus 207 ~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~--~~~~~lElgG~np~iV~~---dAdl~~aa~ 281 (499)
T d1ky8a_ 207 DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLE---DADLDLAAD 281 (499)
T ss_dssp HHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECT---TSCHHHHHH
T ss_pred cccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEeeccc--ccceEEecCCCCeEEEcC---CcChhhhhh
Confidence 99 99999999999888899999997 999999999999999988764 589999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++++|||++++|+|+++|+++++++++|+| ++++++||+++++++++++++++++.. ++++
T Consensus 282 ~i~~~~~~-~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v 360 (499)
T d1ky8a_ 282 KIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRV 360 (499)
T ss_dssp HHHHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred hhhhhhhc-cCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999875 6788
Q ss_pred eeCCCcCCCCCeeeeEEE---eCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 316 VHGGLLDKENLFIEPTIL---LDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil---~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+.||..... .+..++++ .++.+||++++||+||||++|++|+|.|||++++|+++|||++||||+|.+.+++++++
T Consensus 361 ~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~ 439 (499)
T d1ky8a_ 361 LAGGRRLGP-TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRL 439 (499)
T ss_dssp EECCCEEET-TEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHH
T ss_pred eeeeccccc-cccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHh
Confidence 888875432 33333333 34567999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 440 l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 490 (499)
T d1ky8a_ 440 LEVGAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 490 (499)
T ss_dssp CCSSEEEETSCCCC-TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred CCEeEEEEeCCCCC-CCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcC
Confidence 99999999998765 4688999999999999999999999999999999875
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=3.5e-82 Score=661.70 Aligned_cols=432 Identities=26% Similarity=0.351 Sum_probs=391.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++.. |+...+..++++...
T Consensus 35 ~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~ 113 (474)
T d1euha_ 35 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEE 113 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999875 999998888888776
Q ss_pred HHHhhcCcccc--CccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 82 LDKWMAPKKRR--LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 82 ~~~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
........... ......+...+++++|+|||++|+|||||+..++.++++||++||+||+|||+.+|.++.++++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~ 193 (474)
T d1euha_ 114 GLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA 193 (474)
T ss_dssp HTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH
T ss_pred HhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHH
Confidence 65432221111 1112223456788999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++|+ .+.++.|++|+ |+.|.||||+.+++.+.+.++ .+|+++|+||+||+||++ |||++.|+
T Consensus 194 eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~--~k~~~~e~gG~~~~iV~~---dAdl~~aa 268 (474)
T d1euha_ 194 EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLE---DADLELTA 268 (474)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECT---TSCHHHHH
T ss_pred HhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc--cceEEEecCCcceEEEEC---CCchhhHH
Confidence 98 999999999995 67899999998 999999999999999988765 689999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
+.+++++|. |+||.|+++++||||++++++|++.++++...++.+++.+...++|.+...+.+++.+.+..... ++..
T Consensus 269 ~~i~~~~~~-~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (474)
T d1euha_ 269 KNIIAGAFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATA 347 (474)
T ss_dssp HHHHHHHHG-GGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhh-CCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccccccccccchHHHHHHHHHHHhhhcccccc
Confidence 999999999 99999999999999999999999999999999998888556678999999999999999887653 3444
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+.++ ...|+|++|||+..++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++
T Consensus 348 ~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~ 425 (474)
T d1euha_ 348 LTEI--KREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEV 425 (474)
T ss_dssp CSCC--CEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCS
T ss_pred cccC--CCCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCE
Confidence 4332 34689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+++.+ ..+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 426 g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 472 (474)
T d1euha_ 426 GTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472 (474)
T ss_dssp SEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred EEEEEECCCCC-CCCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence 99999997754 577899999999999999999999999999999875
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=7e-76 Score=615.50 Aligned_cols=425 Identities=16% Similarity=0.157 Sum_probs=350.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||++|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++|+++.
T Consensus 22 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~-~Ev~~~~~~~~~~a~~ 100 (504)
T d1ez0a_ 22 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADV 100 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999997 4999999999999998
Q ss_pred HHHhhcCcccc-----CccccCCCcceEEeecceEEEEEccCchhHHHH--HhHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617 82 LDKWMAPKKRR-----LPLLFFPASGEVVSEPFGVVLICSAWNFPINLA--LEPLIGAIAAGNTVMLKPSELAVECASFL 154 (484)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~i~~ALaaGN~Vvlkps~~~~~t~~~l 154 (484)
++++...+... .............++|+|||++|+|||||+... .+++++||++||+||+|||+.+|.++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~ 180 (504)
T d1ez0a_ 101 VNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 180 (504)
T ss_dssp HHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCcccccchhhhh
Confidence 87754432211 111122335677889999999999999998644 46899999999999999999999998877
Q ss_pred HHHh----ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCcee--eecCCcCceEEcC
Q 038617 155 AETI----PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVT--LELGGKCPAILDT 225 (484)
Q Consensus 155 ~~~l----~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~--lelgG~~p~iV~~ 225 (484)
.+++ .++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|.+.++++++|+. +|+|||||+||++
T Consensus 181 ~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~~~~l~~ElGGknp~iV~~ 260 (504)
T d1ez0a_ 181 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFP 260 (504)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECH
T ss_pred hhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcccccccccccccccccccccc
Confidence 6655 455 89999999999 567899999998 9999999999999999999999988765 4999999999999
Q ss_pred CCCCCCHHHHH--HHHHHhhcccCCCCccccCCceEEccchH-HHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHH
Q 038617 226 LSSPLDIKVTV--KRIIGGKFASCNGQVCVGVDYILVEKKFA-ATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERL 302 (484)
Q Consensus 226 ~~~daDl~~aa--~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~ 302 (484)
|||++.|+ ..++.++|. |+||.|++++++||+++.+ +.|++.+++.++. + ++++.+||+++..+.+++
T Consensus 261 ---dAd~~~Aa~~~~~~~~~~~-~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~--~~~~~~gp~i~~~~~~~v 331 (504)
T d1ez0a_ 261 ---SAMRAKADLADQFVASMTM-GCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q--SPSTLLTPGIRDSYQSQV 331 (504)
T ss_dssp ---HHHHHCTTHHHHHHHHHTG-GGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C--CCBCCSSHHHHHHHHHHH
T ss_pred ---cccHHHHhhhhccccchhh-ccCccccccccccchhhhhHHHHhhhhhhhhhh---c--ccccccccchhhhhhhhh
Confidence 99999875 478999999 9999999999999887765 4576766655543 2 446789999999888776
Q ss_pred HHHhhchhcCCceeeCCCcCCCCCeeeeEEEe---CCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEe
Q 038617 303 RKLLKDPLVADAIVHGGLLDKENLFIEPTILL---DPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAF 379 (484)
Q Consensus 303 ~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~---~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 379 (484)
.+...+ ++..+..||.. +.+..|+++. ++..++++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 332 i~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~ 406 (504)
T d1ez0a_ 332 VSRGSD--DGIDVTFSQAE---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIH 406 (504)
T ss_dssp HHHHTS--TTEEEEECCCC---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEE
T ss_pred hhhhhh--hhhhccccccc---ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEE
Confidence 443322 14456666543 3344444443 334578899999999999999999999999999999999999999
Q ss_pred cCC--HHHHHHHhhccc--eeeEEECCCccccC-----CCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 380 TKD--ETFKKQIVSGTS--SGSLIFNDTLVQQL-----CDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 380 t~d--~~~~~~~~~~l~--~g~v~iN~~~~~~~-----~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|+| ..++.+++++++ +|+|+||+.+++.. ....||||.+.||.| ..|.+++++|+++ +.++.
T Consensus 407 t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~--v~~q~ 477 (504)
T d1ez0a_ 407 ATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRP--VAYQA 477 (504)
T ss_dssp CCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEE--EEEES
T ss_pred ecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhch--hhhcc
Confidence 974 458889999986 89999998765321 223488888889855 4699999999854 44443
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.7e-66 Score=529.22 Aligned_cols=394 Identities=17% Similarity=0.211 Sum_probs=300.7
Q ss_pred HHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHH--HH---HHHHHHHHHH
Q 038617 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEI--GL---IKKSAKYALS 80 (484)
Q Consensus 6 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev--~~---~~~~~~~~~~ 80 (484)
+|+++++++|++||++|+++|+++|.++|++++++|++|+++|++++++|+||+..++.. |. .+ ....++..+.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~~~ 79 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEMIK 79 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999887643 32 11 1122333444
Q ss_pred HHHHhhcCc---cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHH
Q 038617 81 CLDKWMAPK---KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET 157 (484)
Q Consensus 81 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~ 157 (484)
.++.+.... ................++|+||++++.|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 80 ACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 443332211 11111112234567788999999999999999999999999999999999999999999999999999
Q ss_pred hccc-cCc----cceeeccC-ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcC-ceEEcCCCCCC
Q 038617 158 IPLY-LDC----KAIKVTNG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKC-PAILDTLSSPL 230 (484)
Q Consensus 158 l~~a-lp~----g~v~~v~g-~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~-p~iV~~~~~da 230 (484)
+.++ .|. ++++.+.+ ..+....++.++ .+.||||+..+..+.+.++++.+++++|+||+| ++||++ ||
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~---dA 234 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLR--EYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDE---SA 234 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCT--TTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECT---TS
T ss_pred HHhhhhhccccccccccccccchhhhhhccccc--ccCeEEEcccHHHHHHHhhhccccceecccCCCCCeeccc---cc
Confidence 8876 444 44555555 455666666553 333333333445556666677788888888765 688999 99
Q ss_pred CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchh
Q 038617 231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPL 310 (484)
Q Consensus 231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~ 310 (484)
|++.|++.++.++|. | ||.|++++|++||+++||+|++.|.+...+..++++. .+ ......
T Consensus 235 d~~~A~~~~~~~~~~-~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~---------~~----~~~~~~---- 295 (414)
T d1o20a_ 235 DLKKAVPVIINAKTQ-R-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG---------CE----KTREIV---- 295 (414)
T ss_dssp CHHHHHHHHHHHHHS-C-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE---------CH----HHHHHS----
T ss_pred chhhhhhHHHhhhhc-C-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc---------ch----hhhhhc----
Confidence 999999999999987 6 9999999999999999999999999988876544320 00 001110
Q ss_pred cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 311 VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 311 ~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
+.+... ....+++|+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 296 -------------------~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~ 353 (414)
T d1o20a_ 296 -------------------PDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV 353 (414)
T ss_dssp -------------------TTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH
T ss_pred -------------------ccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHH
Confidence 011111 1234679999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcc--hHHHHHHhhhccEEEEecCc
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH--GHYSFETFSHEKAIMQRSFF 446 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~--g~~~~~~f~~~k~v~~~~~~ 446 (484)
+++++|+|+||+++.+.....+||||...+|.|+.| |++|+++||+.|+|.+++++
T Consensus 354 ~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~~ 411 (414)
T d1o20a_ 354 SEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEYH 411 (414)
T ss_dssp HHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSSC
T ss_pred HhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCCc
Confidence 999999999999876544444555553333334443 89999999999999887653
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.5e-55 Score=446.68 Aligned_cols=404 Identities=16% Similarity=0.137 Sum_probs=275.4
Q ss_pred HHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHH------cCCChhhhhHHHHHHH-HHHHHHH
Q 038617 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQD------LGKHPVETYRDEIGLI-KKSAKYA 78 (484)
Q Consensus 6 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e------~Gk~~~ea~~~ev~~~-~~~~~~~ 78 (484)
++++++++.|++|++.|+.+|.++|.++|+++++.|++++++|+++..+| .|.+ ++..+.+... ...++..
T Consensus 3 ~~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~--~~~idRL~l~~~~ri~~~ 80 (436)
T d1vlua_ 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA--DSLLKRLDLFKGDKFEVM 80 (436)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCC--HHHHHHHCTTSTTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCc--HHHHHHHhcCchHHHHHH
Confidence 35778899999999999999999999999999999999999998865444 4443 2221111100 0112222
Q ss_pred HHHHHHhhc---C--ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 79 LSCLDKWMA---P--KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 79 ~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
++.++.+.. + +.........+......++|+||+++| ||++| +.++.+.++||++||+||+||++.++.|+..
T Consensus 81 ~~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~ 158 (436)
T d1vlua_ 81 LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFRE 158 (436)
T ss_dssp HHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHH
Confidence 232322221 1 111111122344567788999999988 66777 6777889999999999999999999999998
Q ss_pred HHHHhc--------cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEE
Q 038617 154 LAETIP--------LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL 223 (484)
Q Consensus 154 l~~~l~--------~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV 223 (484)
++++++ ++ +|++++|++++..++++.|+.|+ ||+|+||||...++.+.+.+. +|++.++||++|+||
T Consensus 159 l~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~V 235 (436)
T d1vlua_ 159 MAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYL 235 (436)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEE
T ss_pred HHHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceee
Confidence 888764 44 89999999998778888888887 999999999999888866542 599999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHH
Q 038617 224 DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLR 303 (484)
Q Consensus 224 ~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~ 303 (484)
++ |||+++|++.++.++|. ++|| |++.++++||+++++.|...+......-. .+. .++.......
T Consensus 236 d~---~ADl~~A~~~i~~ak~~-~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv--------~l~--~~~~~~~~~~ 300 (436)
T d1vlua_ 236 DE---DADLIKAKRISLDAKTN-YPAG-CNAMETLLINPKFSKWWEVLENLTLEGGV--------TIH--ATKDLKTAYF 300 (436)
T ss_dssp CT---TCCHHHHHHHHHHTTCC------CCCCEEEEECTTSTTHHHHHHHHHHHHCC--------CBE--ECHHHHHHHH
T ss_pred cc---cccHHHHHHHHHHHhcc-CCCc-cccccceeecHhhhhhhhhhHHHHHhCCc--------EEE--eCHHHHHHhh
Confidence 99 99999999999999999 8886 88999999999999888665544433210 000 0111111111
Q ss_pred HHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 038617 304 KLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383 (484)
Q Consensus 304 ~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 383 (484)
..+.. .+.. .+....|++....+. -+.+|+|+||++|.+|+|+||||+++|++++|||++|||+|.
T Consensus 301 ~~~~~---~~~~--------~~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~ 366 (436)
T d1vlua_ 301 DKLNE---LGKL--------TEAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENK 366 (436)
T ss_dssp HHHHH---HTCC--------CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCH
T ss_pred hhhhh---cccc--------cccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCH
Confidence 11111 1100 011112222222222 268999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceeeEEECCCccccCCCCCCcccC-CCC-CCCCcchHHHHHHhhhccEEEEecC
Q 038617 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGV-GQS-GIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 384 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~-~~S-G~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
+.+++|++++++|.|+||.++.+.+...+.||+. |-| +...-.|+.|++++|..|++.....
T Consensus 367 ~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g 430 (436)
T d1vlua_ 367 ANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDG 430 (436)
T ss_dssp HHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECSS
T ss_pred HHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCC
Confidence 9999999999999999999987655445566653 333 2223469999999999999988765
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.18 Score=48.10 Aligned_cols=326 Identities=15% Similarity=0.190 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCC----hhhhhHHHHHH--------HHHHHHHHHHHHHHhhcCccccC-
Q 038617 27 VAWRKNQLRALIELLQDNEDKIFKALHQDLGKH----PVETYRDEIGL--------IKKSAKYALSCLDKWMAPKKRRL- 93 (484)
Q Consensus 27 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~ea~~~ev~~--------~~~~~~~~~~~~~~~~~~~~~~~- 93 (484)
.++..+..+.+.+.++++.|+=....++...+- +.-+. .|+.. ..+.++.++++++.+...+....
T Consensus 26 ~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~-~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~ 104 (431)
T d1k75a_ 26 SESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPV 104 (431)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 344455666677777777776666666665321 11111 24432 24456667777777765553221
Q ss_pred cc-ccCCCcceEEeecceEEEEEccCc---hhHHHHHhHHHHHHhhCCEE--EEeCCcccHHHHHHHHHHhccccCccce
Q 038617 94 PL-LFFPASGEVVSEPFGVVLICSAWN---FPINLALEPLIGAIAAGNTV--MLKPSELAVECASFLAETIPLYLDCKAI 167 (484)
Q Consensus 94 ~~-~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~i~~ALaaGN~V--vlkps~~~~~t~~~l~~~l~~alp~g~v 167 (484)
.. ...+.....++.|+--|++..|.- ||-..+| ..+||-.+|+.= +.-|+...|.+ ...+.++ |+=
T Consensus 105 ~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM-~aiPAkvAGV~~Ivv~tPp~~~~~~-l~aa~~~------Gv~ 176 (431)
T d1k75a_ 105 DVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPPIADEI-LYAAQLC------GVQ 176 (431)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHHH-HHHHHHHHTCSEEEEEECSSCCHHH-HHHHHHT------TCC
T ss_pred eeeccCCceeeeeeeehhhheeeccCCCccchHHHHH-HHHHHHhcCCCceeEEeCCCCcchH-HHHHHHc------Ccc
Confidence 11 123445677889999999999965 5555444 678999999754 45566555533 1111111 211
Q ss_pred eecc-CChhHHHHHH---hC--CCCeEEEeCChHHHHHHHHHHhcccCceeee-cCCcC--ceEEcCCCCCCCHHHHHHH
Q 038617 168 KVTN-GGVDVCEQLL---QQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLE-LGGKC--PAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 168 ~~v~-g~~~~~~~L~---~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~le-lgG~~--p~iV~~~~~daDl~~aa~~ 238 (484)
.+.. |+.....+|. +. +||.|+=.|+.-+..+=....+... .+-.. +.|.+ -+|-|+ ++|.+.++.+
T Consensus 177 ~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~---~a~p~~iAaD 252 (431)
T d1k75a_ 177 DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADS---GATPDFVASD 252 (431)
T ss_dssp EEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECT---TSCHHHHHHH
T ss_pred ceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecC---CCCHHHHHHH
Confidence 2222 3444444443 12 4999999998876554322222211 11111 22443 355566 8999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~ 316 (484)
++.-+=. ...- +.++|..+ +.+++.+.+.+.+..+. . . +..+..
T Consensus 253 llaQAEH-~~~a-----~~ilvt~~~~l~~~v~~~i~~~l~~l~----r----------~-------~i~~~s------- 298 (431)
T d1k75a_ 253 LLSQAEH-GPDS-----QVILLTPAADMARRVAEAVERQLAELP----R----------A-------ETARQA------- 298 (431)
T ss_dssp HHHHHTT-CTTC-----EEEEEESCHHHHHHHHHHHHHHHHTCS----S----------C-------HHHHHH-------
T ss_pred HHhccCC-cccc-----eeEEEeccHHHHHHHHHHHHHHhhhch----H----------H-------HHHHhh-------
Confidence 9988865 4332 23556544 33444444444443221 0 0 000000
Q ss_pred eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ce
Q 038617 317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SS 395 (484)
Q Consensus 317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~ 395 (484)
+ +-.| ++.++|++|+++++|..--= -..|.++|+.. +..++ .+
T Consensus 299 --------------------------~--~~~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~~---~~~~i~nA 342 (431)
T d1k75a_ 299 --------------------------L--NASR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNARE---LVDSITSA 342 (431)
T ss_dssp --------------------------H--TTCE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHHH---HGGGCCCC
T ss_pred --------------------------h--ccce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHHH---HHhhhhhc
Confidence 0 1111 34579999999999994322 46788888864 44554 68
Q ss_pred eeEEECCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617 396 GSLIFNDTLVQ-------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440 (484)
Q Consensus 396 g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 440 (484)
|.|++...+.- ..+..+|-|| ..++.+..+...|..+-++
T Consensus 343 GsIflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 343 GSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 389 (431)
T ss_dssp SEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEE
T ss_pred chhhcCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeE
Confidence 99999975422 1344566665 4555566677889855443
|