Citrus Sinensis ID: 038680
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 161 | ||||||
| 356539734 | 150 | PREDICTED: bis(5'-adenosyl)-triphosphata | 0.813 | 0.873 | 0.778 | 7e-55 | |
| 351726772 | 157 | uncharacterized protein LOC100305764 [Gl | 0.782 | 0.802 | 0.785 | 2e-53 | |
| 224146587 | 209 | predicted protein [Populus trichocarpa] | 0.782 | 0.602 | 0.769 | 3e-52 | |
| 118487777 | 159 | unknown [Populus trichocarpa] | 0.782 | 0.792 | 0.769 | 9e-52 | |
| 357155456 | 162 | PREDICTED: bis(5'-adenosyl)-triphosphata | 0.819 | 0.814 | 0.711 | 1e-50 | |
| 449495038 | 158 | PREDICTED: bis(5'-adenosyl)-triphosphata | 0.782 | 0.797 | 0.769 | 2e-50 | |
| 30697031 | 180 | bis(5'-adenosyl)-triphosphatase [Arabido | 0.968 | 0.866 | 0.619 | 5e-50 | |
| 359478482 | 189 | PREDICTED: bis(5'-adenosyl)-triphosphata | 0.776 | 0.661 | 0.752 | 6e-50 | |
| 27808510 | 180 | At5g58240 [Arabidopsis thaliana] gi|1107 | 0.968 | 0.866 | 0.619 | 7e-50 | |
| 42573722 | 160 | bis(5'-adenosyl)-triphosphatase [Arabido | 0.776 | 0.781 | 0.744 | 3e-49 |
| >gi|356539734|ref|XP_003538349.1| PREDICTED: bis(5'-adenosyl)-triphosphatase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 116/131 (88%)
Query: 31 WSTCARCFLHEHVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQ 90
+ST + HVL+CS+RE KRF DLTADET+DLWLTAQKVGKQLESYHK SS T AIQ
Sbjct: 20 YSTNLSYAMFLHVLICSKREVKRFVDLTADETSDLWLTAQKVGKQLESYHKASSLTLAIQ 79
Query: 91 DGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMN 150
DGP+AGQ VPHVHIH++PRK+GDFEKNDEIYDAI+ KEKEL+QKLDLDKERKDRSLE+M+
Sbjct: 80 DGPQAGQMVPHVHIHLIPRKSGDFEKNDEIYDAIDEKEKELKQKLDLDKERKDRSLEDMS 139
Query: 151 QEADQYRSLFL 161
QEAD+YR LFL
Sbjct: 140 QEADEYRKLFL 150
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351726772|ref|NP_001236370.1| uncharacterized protein LOC100305764 [Glycine max] gi|255626549|gb|ACU13619.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224146587|ref|XP_002326061.1| predicted protein [Populus trichocarpa] gi|222862936|gb|EEF00443.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|118487777|gb|ABK95712.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357155456|ref|XP_003577126.1| PREDICTED: bis(5'-adenosyl)-triphosphatase-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
| >gi|449495038|ref|XP_004159717.1| PREDICTED: bis(5'-adenosyl)-triphosphatase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|30697031|ref|NP_200632.2| bis(5'-adenosyl)-triphosphatase [Arabidopsis thaliana] gi|332009640|gb|AED97023.1| bis(5'-adenosyl)-triphosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|359478482|ref|XP_002275721.2| PREDICTED: bis(5'-adenosyl)-triphosphatase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|27808510|gb|AAO24535.1| At5g58240 [Arabidopsis thaliana] gi|110736300|dbj|BAF00120.1| bis(5'-adenosyl)-triphosphatase-like [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|42573722|ref|NP_974957.1| bis(5'-adenosyl)-triphosphatase [Arabidopsis thaliana] gi|8777325|dbj|BAA96915.1| bis(5'-adenosyl)-triphosphatase-like protein [Arabidopsis thaliana] gi|332009639|gb|AED97022.1| bis(5'-adenosyl)-triphosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 161 | ||||||
| TAIR|locus:2161313 | 180 | FHIT "FRAGILE HISTIDINE TRIAD" | 0.776 | 0.694 | 0.744 | 4.2e-47 | |
| ZFIN|ZDB-GENE-040426-1703 | 150 | fhit "fragile histidine triad | 0.708 | 0.76 | 0.546 | 3.4e-29 | |
| UNIPROTKB|Q1KZG4 | 149 | FHIT "Bis(5'-adenosyl)-triphos | 0.708 | 0.765 | 0.521 | 2.2e-27 | |
| UNIPROTKB|F1PWA0 | 131 | FHIT "Uncharacterized protein" | 0.701 | 0.862 | 0.525 | 1.9e-26 | |
| UNIPROTKB|F1LRT5 | 150 | Fhit "Bis(5'-adenosyl)-triphos | 0.708 | 0.76 | 0.495 | 3.2e-26 | |
| DICTYBASE|DDB_G0274257 | 149 | fhit "bis(5'-adenosyl)-triphos | 0.658 | 0.711 | 0.512 | 5.2e-26 | |
| RGD|620448 | 150 | Fhit "fragile histidine triad" | 0.708 | 0.76 | 0.487 | 6.6e-26 | |
| UNIPROTKB|P49789 | 147 | FHIT "Bis(5'-adenosyl)-triphos | 0.695 | 0.761 | 0.521 | 8.4e-26 | |
| MGI|MGI:1277947 | 150 | Fhit "fragile histidine triad | 0.708 | 0.76 | 0.504 | 8.4e-26 | |
| UNIPROTKB|F1NA30 | 147 | FHIT "Uncharacterized protein" | 0.695 | 0.761 | 0.487 | 2e-24 |
| TAIR|locus:2161313 FHIT "FRAGILE HISTIDINE TRIAD" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 93/125 (74%), Positives = 105/125 (84%)
Query: 36 RCFLHEHVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEA 95
R L HVLVC RR RF DLTADET+DLWLTAQKVG +LE++H SS T AIQDGP+A
Sbjct: 54 RPLLPAHVLVCPRRLVPRFTDLTADETSDLWLTAQKVGSKLETFHNASSLTLAIQDGPQA 113
Query: 96 GQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQ 155
GQTVPHVHIH+LPRK GDFEKNDEIYDA++ KEKEL+QKLDLDK+R DRS++EM EA Q
Sbjct: 114 GQTVPHVHIHILPRKGGDFEKNDEIYDALDEKEKELKQKLDLDKDRVDRSIQEMADEASQ 173
Query: 156 YRSLF 160
YRSLF
Sbjct: 174 YRSLF 178
|
|
| ZFIN|ZDB-GENE-040426-1703 fhit "fragile histidine triad gene" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q1KZG4 FHIT "Bis(5'-adenosyl)-triphosphatase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PWA0 FHIT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1LRT5 Fhit "Bis(5'-adenosyl)-triphosphatase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0274257 fhit "bis(5'-adenosyl)-triphosphatase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| RGD|620448 Fhit "fragile histidine triad" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P49789 FHIT "Bis(5'-adenosyl)-triphosphatase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1277947 Fhit "fragile histidine triad gene" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NA30 FHIT "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 161 | |||
| cd01275 | 126 | cd01275, FHIT, FHIT (fragile histidine family): FH | 3e-33 | |
| pfam01230 | 97 | pfam01230, HIT, HIT domain | 4e-20 | |
| cd00468 | 86 | cd00468, HIT_like, HIT family: HIT (Histidine tria | 1e-19 | |
| COG0537 | 138 | COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hy | 6e-17 | |
| cd01277 | 103 | cd01277, HINT_subgroup, HINT (histidine triad nucl | 4e-15 | |
| cd01276 | 104 | cd01276, PKCI_related, Protein Kinase C Interactin | 9e-10 |
| >gnl|CDD|238606 cd01275, FHIT, FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-33
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 42 HVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPH 101
HVLV R R DLT +E DL+ Q K L+ +K I DG G VPH
Sbjct: 36 HVLVVPYRHVPRLEDLTPEEIADLFKLVQLAMKALKVVYKPDGFNIGINDGKAGGGIVPH 95
Query: 102 VHIHVLPRKAGDFEKND-EIYDAIEVKEKE 130
VHIH++PR GD IY + ++ E
Sbjct: 96 VHIHIVPRWNGDTNFMPVIIYTKVLPEDLE 125
|
Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours. Length = 126 |
| >gnl|CDD|216377 pfam01230, HIT, HIT domain | Back alignment and domain information |
|---|
| >gnl|CDD|238263 cd00468, HIT_like, HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
| >gnl|CDD|223611 COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|238608 cd01277, HINT_subgroup, HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
| >gnl|CDD|238607 cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 161 | |||
| KOG3379 | 150 | consensus Diadenosine polyphosphate hydrolase and | 100.0 | |
| COG0537 | 138 | Hit Diadenosine tetraphosphate (Ap4A) hydrolase an | 99.97 | |
| cd01275 | 126 | FHIT FHIT (fragile histidine family): FHIT protein | 99.95 | |
| PF01230 | 98 | HIT: HIT domain; InterPro: IPR001310 The Histidine | 99.95 | |
| cd01277 | 103 | HINT_subgroup HINT (histidine triad nucleotide-bin | 99.95 | |
| PRK10687 | 119 | purine nucleoside phosphoramidase; Provisional | 99.94 | |
| cd01276 | 104 | PKCI_related Protein Kinase C Interacting protein | 99.93 | |
| cd00468 | 86 | HIT_like HIT family: HIT (Histidine triad) protein | 99.93 | |
| cd01278 | 104 | aprataxin_related aprataxin related: Aprataxin, a | 99.89 | |
| KOG3275 | 127 | consensus Zinc-binding protein of the histidine tr | 99.87 | |
| TIGR00209 | 347 | galT_1 galactose-1-phosphate uridylyltransferase, | 99.87 | |
| cd00608 | 329 | GalT Galactose-1-phosphate uridyl transferase (Gal | 99.86 | |
| PRK11720 | 346 | galactose-1-phosphate uridylyltransferase; Provisi | 99.85 | |
| PLN02643 | 336 | ADP-glucose phosphorylase | 99.84 | |
| PF11969 | 116 | DcpS_C: Scavenger mRNA decapping enzyme C-term bin | 99.62 | |
| PF02744 | 166 | GalP_UDP_tr_C: Galactose-1-phosphate uridyl transf | 99.56 | |
| COG1085 | 338 | GalT Galactose-1-phosphate uridylyltransferase [En | 99.48 | |
| KOG2958 | 354 | consensus Galactose-1-phosphate uridylyltransferas | 99.47 | |
| KOG4359 | 166 | consensus Protein kinase C inhibitor-like protein | 99.25 | |
| PF04677 | 121 | CwfJ_C_1: Protein similar to CwfJ C-terminus 1; In | 98.77 | |
| KOG2476 | 528 | consensus Uncharacterized conserved protein [Funct | 97.92 | |
| KOG0562 | 184 | consensus Predicted hydrolase (HIT family) [Genera | 97.77 | |
| KOG3969 | 310 | consensus Uncharacterized conserved protein [Funct | 97.53 | |
| COG4360 | 298 | APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetr | 97.49 | |
| PLN03103 | 403 | GDP-L-galactose-hexose-1-phosphate guanyltransfera | 97.31 | |
| cd00608 | 329 | GalT Galactose-1-phosphate uridyl transferase (Gal | 97.09 | |
| PLN02643 | 336 | ADP-glucose phosphorylase | 96.61 | |
| PRK05471 | 252 | CDP-diacylglycerol pyrophosphatase; Provisional | 96.46 | |
| KOG2477 | 628 | consensus Uncharacterized conserved protein [Funct | 96.43 | |
| COG1085 | 338 | GalT Galactose-1-phosphate uridylyltransferase [En | 96.4 | |
| TIGR00672 | 250 | cdh CDP-diacylglycerol pyrophosphatase, bacterial | 96.39 | |
| PRK11720 | 346 | galactose-1-phosphate uridylyltransferase; Provisi | 96.06 | |
| PF02611 | 222 | CDH: CDP-diacylglycerol pyrophosphatase; InterPro: | 95.76 | |
| COG5075 | 305 | Uncharacterized conserved protein [Function unknow | 95.45 | |
| TIGR00209 | 347 | galT_1 galactose-1-phosphate uridylyltransferase, | 94.9 | |
| KOG2720 | 431 | consensus Predicted hydrolase (HIT family) [Genera | 94.68 | |
| PF01087 | 183 | GalP_UDP_transf: Galactose-1-phosphate uridyl tran | 94.62 | |
| COG2134 | 252 | Cdh CDP-diacylglycerol pyrophosphatase [Lipid meta | 94.48 | |
| PF01076 | 196 | Mob_Pre: Plasmid recombination enzyme; InterPro: I | 82.63 |
| >KOG3379 consensus Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family [Nucleotide transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=201.87 Aligned_cols=134 Identities=53% Similarity=0.749 Sum_probs=125.8
Q ss_pred ceEEEEcCcEEEEeCCCCccccCCccCcEEEEEEeccccCCccCCCHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEecC
Q 038680 13 LTKLMRRKCSIALLSPTPWSTCARCFLHEHVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDG 92 (161)
Q Consensus 13 ~r~i~e~e~~~a~~~~~P~~~~~~~~~~Gh~LIiPk~Hv~~l~~L~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~~~~ 92 (161)
-.++|++++.+||.+..|.. |||+||+|+|-+..+.||+.+|..+|+..++.+.+.|++.++..++|+++.+|
T Consensus 17 ~~VFykT~~sfafvNlkPvv-------pgHVLv~P~R~vpRl~dLt~~E~aDlF~t~~~v~~~lek~~~~ts~ti~iQDG 89 (150)
T KOG3379|consen 17 DHVFYKTKHSFAFVNLKPVV-------PGHVLVSPLRVVPRLTDLTAAETADLFTTVQKVQRVLEKHYNATSLTIAIQDG 89 (150)
T ss_pred ceEEEeccceEEEEeccccc-------cceEEEeccccccccccCCcHHHHHHHHHHHHHHHHHHHHhcccceEEEeccc
Confidence 36899999999999999987 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCeEEEEEeecCCCCCCCCchhhhhhHHHHHHHhhhcCCCccCcCCCHHHHHHHHHHHHhhc
Q 038680 93 PEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 160 (161)
Q Consensus 93 ~~ag~~v~HlH~HIIPR~~~d~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 160 (161)
+.|||+|+|+|+||+||+.||+..++.||+.|++-+++ .+.|+.|+.|||++||..||..|
T Consensus 90 ~~AGQTVpHvHvHIlPR~~gDf~~Nd~IY~~L~~~~~e-------~~~r~~Rs~eEM~eEA~~lr~~~ 150 (150)
T KOG3379|consen 90 PEAGQTVPHVHVHILPRKAGDFGDNDLIYDELDKHEKE-------LEDRKPRSLEEMAEEAQRLREYF 150 (150)
T ss_pred cccCcccceeEEEEccccccccccchHHHHHHHhcccc-------cccCCcchHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999865432 26789999999999999999875
|
|
| >COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases | Back alignment and domain information |
|---|
| >PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms [] | Back alignment and domain information |
|---|
| >cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
| >PRK10687 purine nucleoside phosphoramidase; Provisional | Back alignment and domain information |
|---|
| >cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides | Back alignment and domain information |
|---|
| >cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
| >cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome | Back alignment and domain information |
|---|
| >KOG3275 consensus Zinc-binding protein of the histidine triad (HIT) family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 | Back alignment and domain information |
|---|
| >cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate | Back alignment and domain information |
|---|
| >PRK11720 galactose-1-phosphate uridylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02643 ADP-glucose phosphorylase | Back alignment and domain information |
|---|
| >PF11969 DcpS_C: Scavenger mRNA decapping enzyme C-term binding; PDB: 1VLR_B 1XMM_D 1XML_B 1ST0_A 3BLA_B 3BL9_B 3BL7_B 1ST4_B 1XQU_B | Back alignment and domain information |
|---|
| >PF02744 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transferase, C-terminal domain; InterPro: IPR005850 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism | Back alignment and domain information |
|---|
| >COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG2958 consensus Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG4359 consensus Protein kinase C inhibitor-like protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues | Back alignment and domain information |
|---|
| >KOG2476 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0562 consensus Predicted hydrolase (HIT family) [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3969 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PLN03103 GDP-L-galactose-hexose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate | Back alignment and domain information |
|---|
| >PLN02643 ADP-glucose phosphorylase | Back alignment and domain information |
|---|
| >PRK05471 CDP-diacylglycerol pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG2477 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR00672 cdh CDP-diacylglycerol pyrophosphatase, bacterial type | Back alignment and domain information |
|---|
| >PRK11720 galactose-1-phosphate uridylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF02611 CDH: CDP-diacylglycerol pyrophosphatase; InterPro: IPR003763 The CDP-diacylglycerol pyrophosphatases 3 | Back alignment and domain information |
|---|
| >COG5075 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 | Back alignment and domain information |
|---|
| >KOG2720 consensus Predicted hydrolase (HIT family) [General function prediction only] | Back alignment and domain information |
|---|
| >PF01087 GalP_UDP_transf: Galactose-1-phosphate uridyl transferase, N-terminal domain; InterPro: IPR005849 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism | Back alignment and domain information |
|---|
| >COG2134 Cdh CDP-diacylglycerol pyrophosphatase [Lipid metabolism] | Back alignment and domain information |
|---|
| >PF01076 Mob_Pre: Plasmid recombination enzyme; InterPro: IPR001668 With some plasmids, recombination can occur in a site specific manner that is independent of RecA | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 161 | ||||
| 1fhi_A | 147 | Substrate Analog (Ib2) Complex With The Fragile His | 1e-26 | ||
| 3fit_A | 147 | Fhit (Fragile Histidine Triad Protein) In Complex W | 3e-26 | ||
| 1ems_A | 440 | Crystal Structure Of The C. Elegans Nitfhit Protein | 4e-26 | ||
| 2fhi_A | 147 | Substrate Analog (Ib2) Complex With The His 96 Asn | 7e-26 | ||
| 3o0m_A | 149 | Crystal Structure Of A Zn-Bound Histidine Triad Fam | 5e-06 | ||
| 3ano_A | 218 | Crystal Structure Of A Novel Diadenosine 5',5'''-P1 | 2e-04 | ||
| 3l7x_A | 173 | The Crystal Structure Of Smu.412c From Streptococcu | 6e-04 |
| >pdb|1FHI|A Chain A, Substrate Analog (Ib2) Complex With The Fragile Histidine Triad Protein, Fhit Length = 147 | Back alignment and structure |
|
| >pdb|3FIT|A Chain A, Fhit (Fragile Histidine Triad Protein) In Complex With AdenosineSULFATE AMP ANALOG Length = 147 | Back alignment and structure |
| >pdb|1EMS|A Chain A, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440 | Back alignment and structure |
| >pdb|2FHI|A Chain A, Substrate Analog (Ib2) Complex With The His 96 Asn Substitution Of The Fragile Histidine Triad Protein, Fhit Length = 147 | Back alignment and structure |
| >pdb|3O0M|A Chain A, Crystal Structure Of A Zn-Bound Histidine Triad Family Protein From Mycobacterium Smegmatis Length = 149 | Back alignment and structure |
| >pdb|3ANO|A Chain A, Crystal Structure Of A Novel Diadenosine 5',5'''-P1,P4-Tetraphosphate Phosphorylase From Mycobacterium Tuberculosis H37rv Length = 218 | Back alignment and structure |
| >pdb|3L7X|A Chain A, The Crystal Structure Of Smu.412c From Streptococcus Mutans Ua159 Length = 173 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 161 | |||
| 1fit_A | 147 | FragIle histidine protein; FHIT, fragIle histidine | 2e-46 | |
| 1ems_A | 440 | Nitfhit, NIT-fragIle histidine triad fusion protei | 3e-43 | |
| 3ano_A | 218 | AP-4-A phosphorylase; diadenosine polyphosphate, H | 9e-22 | |
| 2eo4_A | 149 | 150AA long hypothetical histidine triad nucleotid | 3e-20 | |
| 3l7x_A | 173 | SMU.412C, putative HIT-like protein involved in ce | 9e-18 | |
| 2oik_A | 154 | Histidine triad (HIT) protein; HIT-like fold, stru | 6e-17 | |
| 3imi_A | 147 | HIT family protein; structural genomics, infectiou | 7e-16 | |
| 3p0t_A | 138 | Uncharacterized protein; ssgcid, HIT-like protein, | 1e-15 | |
| 1y23_A | 145 | HIT, histidine triad protein; HIT protein, PKCI-1, | 5e-15 | |
| 3i4s_A | 149 | Histidine triad protein; hydrolase, phosphatase, H | 1e-14 | |
| 3lb5_A | 161 | HIT-like protein involved in cell-cycle regulatio; | 2e-14 | |
| 3o0m_A | 149 | HIT family protein; ssgcid, NIH, niaid, SBRI, UW, | 1e-13 | |
| 3r6f_A | 135 | HIT family protein; structural genomics, seattle s | 3e-13 | |
| 3ksv_A | 149 | Uncharacterized protein; HIT family, structural ge | 5e-13 | |
| 3nrd_A | 135 | Histidine triad (HIT) protein; structural genomics | 2e-11 | |
| 3i24_A | 149 | HIT family hydrolase; structural genomics, PSI-2, | 2e-10 | |
| 3ohe_A | 137 | Histidine triad (HIT) protein; structural genomics | 6e-10 | |
| 3o1c_A | 126 | Histidine triad nucleotide-binding protein 1; hydr | 3e-09 | |
| 3n1s_A | 119 | HIT-like protein HINT; histidine triad nucleotide | 3e-09 | |
| 4egu_A | 119 | Histidine triad (HIT) protein; structural genomics | 4e-09 | |
| 3oj7_A | 117 | Putative histidine triad family protein; hydrolase | 7e-09 | |
| 1xqu_A | 147 | HIT family hydrolase; protein STRU initiative, PSI | 1e-08 |
| >1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* Length = 147 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 2e-46
Identities = 62/119 (52%), Positives = 76/119 (63%), Gaps = 7/119 (5%)
Query: 42 HVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPH 101
HVLVC R +RF DL DE DL+ T Q+VG +E + G+S TF++QDGPEAGQTV H
Sbjct: 35 HVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKH 94
Query: 102 VHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 160
VH+HVLPRKAGDF +ND IY+ ++ +KE D RS EEM EA R F
Sbjct: 95 VHVHVLPRKAGDFHRNDSIYEELQKHDKE-------DFPASWRSEEEMAAEAAALRVYF 146
|
| >1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 Length = 440 | Back alignment and structure |
|---|
| >3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} Length = 218 | Back alignment and structure |
|---|
| >2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} Length = 149 | Back alignment and structure |
|---|
| >3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans} Length = 173 | Back alignment and structure |
|---|
| >2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 Length = 154 | Back alignment and structure |
|---|
| >3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} Length = 147 | Back alignment and structure |
|---|
| >3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp} Length = 138 | Back alignment and structure |
|---|
| >1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 Length = 145 | Back alignment and structure |
|---|
| >3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} Length = 149 | Back alignment and structure |
|---|
| >3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae} Length = 161 | Back alignment and structure |
|---|
| >3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} Length = 149 | Back alignment and structure |
|---|
| >3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi} Length = 135 | Back alignment and structure |
|---|
| >3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} Length = 149 | Back alignment and structure |
|---|
| >3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} Length = 135 | Back alignment and structure |
|---|
| >3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} Length = 149 | Back alignment and structure |
|---|
| >3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei} Length = 137 | Back alignment and structure |
|---|
| >3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A Length = 126 | Back alignment and structure |
|---|
| >3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} PDB: 3n1t_A* Length = 119 | Back alignment and structure |
|---|
| >4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile} Length = 119 | Back alignment and structure |
|---|
| >3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} PDB: 3omf_A* 3oxk_A* Length = 117 | Back alignment and structure |
|---|
| >1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 Length = 147 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 161 | |||
| 1fit_A | 147 | FragIle histidine protein; FHIT, fragIle histidine | 100.0 | |
| 3ksv_A | 149 | Uncharacterized protein; HIT family, structural ge | 99.98 | |
| 3imi_A | 147 | HIT family protein; structural genomics, infectiou | 99.97 | |
| 3lb5_A | 161 | HIT-like protein involved in cell-cycle regulatio; | 99.97 | |
| 3o0m_A | 149 | HIT family protein; ssgcid, NIH, niaid, SBRI, UW, | 99.97 | |
| 2eo4_A | 149 | 150AA long hypothetical histidine triad nucleotid | 99.97 | |
| 1y23_A | 145 | HIT, histidine triad protein; HIT protein, PKCI-1, | 99.97 | |
| 3l7x_A | 173 | SMU.412C, putative HIT-like protein involved in ce | 99.97 | |
| 1ems_A | 440 | Nitfhit, NIT-fragIle histidine triad fusion protei | 99.96 | |
| 3p0t_A | 138 | Uncharacterized protein; ssgcid, HIT-like protein, | 99.96 | |
| 3r6f_A | 135 | HIT family protein; structural genomics, seattle s | 99.96 | |
| 3ohe_A | 137 | Histidine triad (HIT) protein; structural genomics | 99.96 | |
| 3i24_A | 149 | HIT family hydrolase; structural genomics, PSI-2, | 99.96 | |
| 3ano_A | 218 | AP-4-A phosphorylase; diadenosine polyphosphate, H | 99.96 | |
| 2oik_A | 154 | Histidine triad (HIT) protein; HIT-like fold, stru | 99.95 | |
| 3n1s_A | 119 | HIT-like protein HINT; histidine triad nucleotide | 99.95 | |
| 4egu_A | 119 | Histidine triad (HIT) protein; structural genomics | 99.95 | |
| 3nrd_A | 135 | Histidine triad (HIT) protein; structural genomics | 99.95 | |
| 3oj7_A | 117 | Putative histidine triad family protein; hydrolase | 99.94 | |
| 3o1c_A | 126 | Histidine triad nucleotide-binding protein 1; hydr | 99.94 | |
| 3i4s_A | 149 | Histidine triad protein; hydrolase, phosphatase, H | 99.94 | |
| 1xqu_A | 147 | HIT family hydrolase; protein STRU initiative, PSI | 99.92 | |
| 1gup_A | 348 | Galactose-1-phosphate uridylyltransferase; nucleot | 99.89 | |
| 1z84_A | 351 | Galactose-1-phosphate uridyl transferase-like prot | 99.88 | |
| 3sp4_A | 204 | Aprataxin-like protein; HIT domain, zinc finger, D | 99.51 | |
| 3bl9_A | 301 | Scavenger mRNA-decapping enzyme DCPS; ligand compl | 98.96 | |
| 1vlr_A | 350 | MRNA decapping enzyme; 16740816, structural genomi | 98.93 | |
| 1z84_A | 351 | Galactose-1-phosphate uridyl transferase-like prot | 98.49 | |
| 1gup_A | 348 | Galactose-1-phosphate uridylyltransferase; nucleot | 96.23 | |
| 2pof_A | 227 | CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM0 | 96.08 |
| >1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=214.75 Aligned_cols=135 Identities=48% Similarity=0.739 Sum_probs=110.5
Q ss_pred CceEEEEcCcEEEEeCCCCccccCCccCcEEEEEEeccccCCccCCCHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEec
Q 038680 12 GLTKLMRRKCSIALLSPTPWSTCARCFLHEHVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQD 91 (161)
Q Consensus 12 ~~r~i~e~e~~~a~~~~~P~~~~~~~~~~Gh~LIiPk~Hv~~l~~L~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~~~ 91 (161)
+.++|||+++++||+|.+|.+ |||+||+||+|+.++.+|+++++.+|+.+++++++++++.+++++||+++|+
T Consensus 12 ~~~iv~e~~~~~a~~d~~p~~-------pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~ 84 (147)
T 1fit_A 12 PSVVFLKTELSFALVNRKPVV-------PGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQD 84 (147)
T ss_dssp GGGEEEECSSEEEEECSSCSS-------TTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred CcEEEEECCCEEEEECCCCCC-------CcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 568999999999999999988 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCeEEEEEeecCCCCCCCCchhhhhhHHHHHHHhhhcCCCccCcCCCHHHHHHHHHHHHhhc
Q 038680 92 GPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 160 (161)
Q Consensus 92 ~~~ag~~v~HlH~HIIPR~~~d~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 160 (161)
|+.+||+|+|+|+|||||+.+|..+++++|+.+..... .+..++.+++|||+++|++||+.|
T Consensus 85 g~~agq~v~HlH~HiiPr~~~d~~~~~~v~~~~~~~~~-------~~~~~~~~~~~e~~~~a~~lr~~l 146 (147)
T 1fit_A 85 GPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDK-------EDFPASWRSEEEMAAEAAALRVYF 146 (147)
T ss_dssp SGGGTCCSSSCCEEEEEECTTC---------------------------CCCCCHHHHHHHHHHHHHTT
T ss_pred CCccCCCccEEEEEEECCcCCCCCCcchHHHHhhhccc-------ccccccCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998752210 012456789999999999999876
|
| >3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0 | Back alignment and structure |
|---|
| >3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1 | Back alignment and structure |
|---|
| >3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae} | Back alignment and structure |
|---|
| >3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
| >2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 | Back alignment and structure |
|---|
| >3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans} | Back alignment and structure |
|---|
| >1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 | Back alignment and structure |
|---|
| >3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
| >3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
| >3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
| >3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} | Back alignment and structure |
|---|
| >3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 | Back alignment and structure |
|---|
| >3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A* | Back alignment and structure |
|---|
| >4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile} | Back alignment and structure |
|---|
| >3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A* | Back alignment and structure |
|---|
| >3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A | Back alignment and structure |
|---|
| >3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} | Back alignment and structure |
|---|
| >1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 | Back alignment and structure |
|---|
| >1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* | Back alignment and structure |
|---|
| >1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* | Back alignment and structure |
|---|
| >3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A* | Back alignment and structure |
|---|
| >3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A* | Back alignment and structure |
|---|
| >1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B* | Back alignment and structure |
|---|
| >1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* | Back alignment and structure |
|---|
| >1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* | Back alignment and structure |
|---|
| >2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 161 | ||||
| d1fita_ | 146 | d.13.1.1 (A:) FHIT (fragile histidine triad protei | 3e-25 | |
| d1emsa1 | 160 | d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-te | 1e-19 | |
| d1kpfa_ | 111 | d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 | 2e-12 | |
| d1xqua_ | 113 | d.13.1.1 (A:) Putative hydrolase {Clostridium ther | 5e-10 | |
| d1y23a_ | 139 | d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423] | 8e-09 | |
| d2oika1 | 139 | d.13.1.1 (A:6-144) Histidine triad protein Mfla250 | 7e-07 | |
| d1guqa2 | 171 | d.13.1.2 (A:178-348) Galactose-1-phosphate uridyly | 4e-05 | |
| d1z84a2 | 156 | d.13.1.2 (A:196-351) Galactose-1-phosphate uridyly | 7e-04 |
| >d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: FHIT (fragile histidine triad protein) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.2 bits (228), Expect = 3e-25
Identities = 62/119 (52%), Positives = 76/119 (63%), Gaps = 7/119 (5%)
Query: 42 HVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPH 101
HVLVC R +RF DL DE DL+ T Q+VG +E + G+S TF++QDGPEAGQTV H
Sbjct: 34 HVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKH 93
Query: 102 VHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 160
VH+HVLPRKAGDF +ND IY+ ++ +KE D RS EEM EA R F
Sbjct: 94 VHVHVLPRKAGDFHRNDSIYEELQKHDKE-------DFPASWRSEEEMAAEAAALRVYF 145
|
| >d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 160 | Back information, alignment and structure |
|---|
| >d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
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| >d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} Length = 113 | Back information, alignment and structure |
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| >d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]} Length = 139 | Back information, alignment and structure |
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| >d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]} Length = 139 | Back information, alignment and structure |
|---|
| >d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Length = 171 | Back information, alignment and structure |
|---|
| >d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 156 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 161 | |||
| d1fita_ | 146 | FHIT (fragile histidine triad protein) {Human (Hom | 100.0 | |
| d1emsa1 | 160 | NIT-FHIT fusion protein, C-terminal domain {Nemato | 100.0 | |
| d1y23a_ | 139 | Hit {Bacillus subtilis [TaxId: 1423]} | 99.97 | |
| d2oika1 | 139 | Histidine triad protein Mfla2506 {Methylobacillus | 99.96 | |
| d1kpfa_ | 111 | Protein kinase C inhibitor-1, PKCI-1 {Human (Homo | 99.94 | |
| d1xqua_ | 113 | Putative hydrolase {Clostridium thermocellum [TaxI | 99.94 | |
| d1z84a2 | 156 | Galactose-1-phosphate uridylyltransferase {Thale c | 99.92 | |
| d1guqa2 | 171 | Galactose-1-phosphate uridylyltransferase {Escheri | 99.89 | |
| d1vlra1 | 192 | mRNA decapping enzyme DcpS C-terminal domain {Mous | 99.32 | |
| d1z84a1 | 173 | Galactose-1-phosphate uridylyltransferase {Thale c | 97.56 | |
| d2pofa1 | 220 | CDP-diacylglycerol pyrophosphatase CDH {Escherichi | 96.95 | |
| d1guqa1 | 176 | Galactose-1-phosphate uridylyltransferase {Escheri | 96.86 |
| >d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: FHIT (fragile histidine triad protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-36 Score=221.87 Aligned_cols=136 Identities=49% Similarity=0.745 Sum_probs=111.3
Q ss_pred CceEEEEcCcEEEEeCCCCccccCCccCcEEEEEEeccccCCccCCCHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEec
Q 038680 12 GLTKLMRRKCSIALLSPTPWSTCARCFLHEHVLVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQD 91 (161)
Q Consensus 12 ~~r~i~e~e~~~a~~~~~P~~~~~~~~~~Gh~LIiPk~Hv~~l~~L~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~~~ 91 (161)
..++||||++++||+|++|.+ +||+||+||+|+.++.+|+++++.+++.+++.+.+++++.++++++|+++|+
T Consensus 11 p~~ii~e~e~~~afld~~P~~-------pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~~~ 83 (146)
T d1fita_ 11 PSVVFLKTELSFALVNRKPVV-------PGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQD 83 (146)
T ss_dssp GGGEEEECSSEEEEECSSCSS-------TTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred cceEEEECCCEEEEECCCCCC-------CcEEEEEecceehHHHHhhHHHHHHHHHHHHHHHHHHHhhcccceEEEEEcc
Confidence 567999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCeEEEEEeecCCCCCCCCchhhhhhHHHHHHHhhhcCCCccCcCCCHHHHHHHHHHHHhhcC
Q 038680 92 GPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLFL 161 (161)
Q Consensus 92 ~~~ag~~v~HlH~HIIPR~~~d~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 161 (161)
|+.+||+|+|+|+|||||+.||+.+++.+|+.+...+.+ +-+++.++.|||+++|++||+.|.
T Consensus 84 g~~agq~v~HlH~HiiPR~~gD~~~~~~~~~~~~~~~~~-------~~~~~~r~~ee~~~~a~~lr~~~~ 146 (146)
T d1fita_ 84 GPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKE-------DFPASWRSEEEMAAEAAALRVYFQ 146 (146)
T ss_dssp SGGGTCCSSSCCEEEEEECTTC---------------------------CCCCCHHHHHHHHHHHHHTTC
T ss_pred ccccCCCCCEEEEEEecCcCCCcccccchhhhhhhhchh-------hhhhccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999888899877654321 234566889999999999999873
|
| >d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
| >d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vlra1 d.13.1.3 (A:146-337) mRNA decapping enzyme DcpS C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2pofa1 d.13.1.4 (A:31-250) CDP-diacylglycerol pyrophosphatase CDH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|