Citrus Sinensis ID: 038682


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFNGDDDLKRHIESSPCAKFEVIFV
cccccccccEEEEcccccccccccccccccccEEEEcccccccccccHHHHHccccccEEEEccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHccccEEEcccccccccccHHHHHHHccccEEEEEcccccccccHHHHHHHHHcccEEEEEccccEEEcccccccEEEEcccccHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHcccccccccccccccccccccccccEEEEEcccccccccEEccccccccHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEccccHHcEEEEEEEcccHHHHHHHHccccccEEEEEc
ccccccccEEEEccccccccccccccccccccEEEEEcccccccccccccHHHcccEEEEEEEcccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHEEEEEEccccccHHHHHHHHHHHccccEEEEccccHHHHccccccEEEEcccccHHHHHHHHHHHcccHHHHHHHHHHHcccccccccEEHHHHcccHHHHHHHHHHHcccccccccccccccccEccccccEEEEEEEEEcccEEEEEEEEEccccHHHHHHHHHHHHHHccccccEcccccccHcccccccEEEEEEEccHHHHHHHHEEEccccHHHHHHHHcccccEEEEEEc
ewrvcdvrckfgydddrkpdasfgmsqqpgtdTVLRSMESSQYYAENNIAQARRRGYTIVMTTslssdvpvgyfswaeydimapvqpktESALAAAFISNCGARNFRLQALEALEKENvkidsyggchrnrdgrvEKVETLKRYKFSLAfensneedyVTEKFFQALVAgsvpvvvgapniqdfapspksilhirerEDVKSVAKTMKYLAenpeaynqslswkyegpsdsfKALVDMAAVHSSCRLCIYLATKIQereetnpafrkrpckctrgsetvhHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFkslkhvpiwkqerpksirgedelkiyrihpvgltqRQALYEFkfngdddlkrhiesspcakfevifv
ewrvcdvrckfgydddrkpdasfgmsqqpgTDTVLRSMESSQYYAENniaqarrrGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKEnvkidsyggchrnrdgrvekveTLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQdfapspksilhirerEDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKiqereetnpafrkrpckctrgsetvhhlyvrergrfKMVSIFLRSGSLTLKALESAVLakfkslkhvpiwkqerpksirgedelKIYRIHPVGLTQRQALYEFKFNGDDDLKRHIesspcakfevifv
EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALvagsvpvvvgapNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFNGDDDLKRHIESSPCAKFEVIFV
**RVCDVRCKFGY*****************************YYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPS*KSILHIR*******VAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQER*****AFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFNGDDDLKRHIE**PCAKFEVI**
EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIM****PKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPI****************IYRIHPVGLTQRQALYEFKFNGDDDLKRHIESSPCAKFEVIFV
EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFNGDDDLKRHIESSPCAKFEVIFV
*WRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQ*REETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFNGDDDLKRHIESSPCAKFEVIFV
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EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFNGDDDLKRHIESSPCAKFEVIFV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query382 2.2.26 [Sep-21-2011]
Q9LJK1501 Glycoprotein 3-alpha-L-fu yes no 1.0 0.762 0.753 1e-180
Q9FX97513 Putative fucosyltransfera no no 1.0 0.744 0.736 1e-174
Q9VUL9503 Glycoprotein 3-alpha-L-fu yes no 0.479 0.363 0.336 2e-18
Q8AWB5475 Alpha-(1,3)-fucosyltransf yes no 0.403 0.324 0.344 2e-16
P56433374 Alpha-(1,3)-fucosyltransf yes no 0.594 0.606 0.288 4e-16
P56434359 Alpha-(1,3)-fucosyltransf no no 0.431 0.459 0.316 9e-16
Q6NTZ6469 Alpha-(1,3)-fucosyltransf N/A no 0.335 0.272 0.364 1e-15
Q6A1G3471 Alpha-(1,3)-fucosyltransf no no 0.335 0.271 0.364 1e-15
P51993359 Alpha-(1,3)-fucosyltransf yes no 0.494 0.526 0.303 2e-15
P21217361 Galactoside 3(4)-L-fucosy no no 0.502 0.531 0.299 2e-15
>sp|Q9LJK1|FUT11_ARATH Glycoprotein 3-alpha-L-fucosyltransferase A OS=Arabidopsis thaliana GN=FUT11 PE=2 SV=1 Back     alignment and function desciption
 Score =  631 bits (1628), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 288/382 (75%), Positives = 341/382 (89%)

Query: 1   EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIV 60
           +++ C V C  G+  D+KPDA+FG+S QPGT +++RSMES+QYY ENN+AQARR+GY IV
Sbjct: 120 DFKSCSVDCVMGFTSDKKPDAAFGLSHQPGTLSIIRSMESAQYYQENNLAQARRKGYDIV 179

Query: 61  MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVK 120
           MTTSLSSDVPVGYFSWAEYDIMAPVQPKTE ALAAAFISNC ARNFRLQALEAL K NVK
Sbjct: 180 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTEKALAAAFISNCAARNFRLQALEALMKTNVK 239

Query: 121 IDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPN 180
           IDSYGGCHRNRDG VEKVE LK YKFSLAFEN+NEEDYVTEKFFQ+LVAGSVPVVVGAPN
Sbjct: 240 IDSYGGCHRNRDGSVEKVEALKHYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPN 299

Query: 181 IQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAA 240
           I++FAPSP S LHI++ +DVK+VAK MKYLA+NP+AYNQ+L WK+EGPSDSFKAL+DMAA
Sbjct: 300 IEEFAPSPDSFLHIKQMDDVKAVAKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAA 359

Query: 241 VHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSG 300
           VHSSCRLCI++AT+I+E+EE +P F++RPCKCTRGSETV+HLYVRERGRF M SIFL+ G
Sbjct: 360 VHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVYHLYVRERGRFDMESIFLKDG 419

Query: 301 SLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFN 360
           +LTL+ALESAVLAKF SL++ PIWK+ERP S+RG+ +L+++ I+P+GLTQRQALY FKF 
Sbjct: 420 NLTLEALESAVLAKFMSLRYEPIWKKERPASLRGDGKLRVHGIYPIGLTQRQALYNFKFE 479

Query: 361 GDDDLKRHIESSPCAKFEVIFV 382
           G+  L  HI+ +PC KFEV+FV
Sbjct: 480 GNSSLSTHIQRNPCPKFEVVFV 501




Involved in cell wall synthesis. Catalyzes alpha-1,3 glycosidic linkages.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 1EC: 4
>sp|Q9FX97|FUT12_ARATH Putative fucosyltransferase-like protein OS=Arabidopsis thaliana GN=FUT12 PE=2 SV=1 Back     alignment and function description
>sp|Q9VUL9|FUCTA_DROME Glycoprotein 3-alpha-L-fucosyltransferase A OS=Drosophila melanogaster GN=FucTA PE=1 SV=2 Back     alignment and function description
>sp|Q8AWB5|FUT10_CHICK Alpha-(1,3)-fucosyltransferase 10 OS=Gallus gallus GN=FUT10 PE=2 SV=2 Back     alignment and function description
>sp|P56433|FUT5_PANTR Alpha-(1,3)-fucosyltransferase OS=Pan troglodytes GN=FUT5 PE=3 SV=1 Back     alignment and function description
>sp|P56434|FUT6_PANTR Alpha-(1,3)-fucosyltransferase OS=Pan troglodytes GN=FUT6 PE=3 SV=1 Back     alignment and function description
>sp|Q6NTZ6|FUT10_XENLA Alpha-(1,3)-fucosyltransferase 10 OS=Xenopus laevis GN=fut10 PE=2 SV=2 Back     alignment and function description
>sp|Q6A1G3|FUT10_XENTR Alpha-(1,3)-fucosyltransferase 10 OS=Xenopus tropicalis GN=fut10 PE=2 SV=1 Back     alignment and function description
>sp|P51993|FUT6_HUMAN Alpha-(1,3)-fucosyltransferase OS=Homo sapiens GN=FUT6 PE=1 SV=1 Back     alignment and function description
>sp|P21217|FUT3_HUMAN Galactoside 3(4)-L-fucosyltransferase OS=Homo sapiens GN=FUT3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
225428818 504 PREDICTED: putative fucosyltransferase-l 1.0 0.757 0.808 0.0
224105555 523 predicted protein [Populus trichocarpa] 1.0 0.730 0.787 0.0
255555451 525 glycoprotein 3-alpha-l-fucosyltransferas 1.0 0.727 0.787 0.0
61845103 522 alpha 1,3 fucosyltransferase [Populus tr 0.997 0.729 0.785 0.0
356500027 515 PREDICTED: glycoprotein 3-alpha-L-fucosy 1.0 0.741 0.790 0.0
357475365 504 Glycoprotein 3-alpha-L-fucosyltransferas 1.0 0.757 0.780 0.0
5702039 510 Fuct c3 protein [Vigna radiata var. radi 1.0 0.749 0.782 0.0
37543464 505 alpha 1,3 fucosyltransferase [Medicago s 1.0 0.756 0.774 0.0
356521510 516 PREDICTED: glycoprotein 3-alpha-L-fucosy 1.0 0.740 0.780 0.0
37543456 506 alpha 1,3 fucosyltransferase [Medicago s 1.0 0.754 0.774 0.0
>gi|225428818|ref|XP_002285245.1| PREDICTED: putative fucosyltransferase-like protein [Vitis vinifera] gi|297741274|emb|CBI32405.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/382 (80%), Positives = 347/382 (90%)

Query: 1   EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIV 60
           EW+ C V CKF Y+   K DASFG+ Q  GT +V+RSMES+QYY+EN I  ARRRGY I+
Sbjct: 123 EWKTCAVGCKFEYNSHGKLDASFGIPQPAGTASVIRSMESAQYYSENKIDLARRRGYDII 182

Query: 61  MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVK 120
           MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESA+AAAFISNCGARNFRLQALEALEK NVK
Sbjct: 183 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESAIAAAFISNCGARNFRLQALEALEKANVK 242

Query: 121 IDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPN 180
           IDSYGGCHRNRDGRV+KV+ LK YKFSLAFENSNEEDYVTEKFFQ+LVAGSVPVV+GAPN
Sbjct: 243 IDSYGGCHRNRDGRVDKVQALKHYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVIGAPN 302

Query: 181 IQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAA 240
           IQDFAPSP SILHI+E +D + VAKTMKYLAE+PE YNQSL WKYEGPSDSFKALVDMAA
Sbjct: 303 IQDFAPSPGSILHIKELKDAEPVAKTMKYLAEHPEEYNQSLRWKYEGPSDSFKALVDMAA 362

Query: 241 VHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSG 300
           VHSSCRLCI+LAT I+E+EE +P F+KRPCKCTRGSETV+HLY+RERGRF+M SIFLRSG
Sbjct: 363 VHSSCRLCIHLATAIREKEENSPGFQKRPCKCTRGSETVYHLYIRERGRFEMESIFLRSG 422

Query: 301 SLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFN 360
           +LTL+AL+SA+L KFKSL HVPIWK+ERP+SIRG++ELK+YRI+PVGLTQRQALY FKF 
Sbjct: 423 NLTLEALQSAILKKFKSLNHVPIWKEERPESIRGDNELKVYRIYPVGLTQRQALYTFKFE 482

Query: 361 GDDDLKRHIESSPCAKFEVIFV 382
           GD DL+ H+ES+PCAKFEVIFV
Sbjct: 483 GDADLRSHVESNPCAKFEVIFV 504




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105555|ref|XP_002313854.1| predicted protein [Populus trichocarpa] gi|222850262|gb|EEE87809.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255555451|ref|XP_002518762.1| glycoprotein 3-alpha-l-fucosyltransferase A, putative [Ricinus communis] gi|223542143|gb|EEF43687.1| glycoprotein 3-alpha-l-fucosyltransferase A, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|61845103|emb|CAI70373.1| alpha 1,3 fucosyltransferase [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|356500027|ref|XP_003518836.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Glycine max] Back     alignment and taxonomy information
>gi|357475365|ref|XP_003607968.1| Glycoprotein 3-alpha-L-fucosyltransferase A [Medicago truncatula] gi|355509023|gb|AES90165.1| Glycoprotein 3-alpha-L-fucosyltransferase A [Medicago truncatula] Back     alignment and taxonomy information
>gi|5702039|emb|CAB52254.1| Fuct c3 protein [Vigna radiata var. radiata] Back     alignment and taxonomy information
>gi|37543464|gb|AAL99371.1| alpha 1,3 fucosyltransferase [Medicago sativa] Back     alignment and taxonomy information
>gi|356521510|ref|XP_003529398.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Glycine max] Back     alignment and taxonomy information
>gi|37543456|gb|AAL99370.1| alpha 1,3 fucosyltransferase [Medicago sativa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
TAIR|locus:2094078501 FUT11 "fucosyltransferase 11" 1.0 0.762 0.722 1.9e-154
TAIR|locus:2012217513 FUT12 "fucosyltransferase 12" 0.994 0.740 0.710 5.4e-150
DICTYBASE|DDB_G0293768555 fut9 "alpha-3/4-fucosyltransfe 0.840 0.578 0.307 1.2e-35
FB|FBgn0036485503 FucTA "FucTA" [Drosophila mela 0.418 0.318 0.346 6e-15
DICTYBASE|DDB_G0284467389 fut1 "alpha-3/4-fucosyltransfe 0.473 0.465 0.271 4.8e-13
UNIPROTKB|P51993359 FUT6 "Alpha-(1,3)-fucosyltrans 0.523 0.557 0.272 9.2e-12
DICTYBASE|DDB_G0274297501 fut3 "alpha-3/4-fucosyltransfe 0.518 0.395 0.278 1.3e-11
ZFIN|ZDB-GENE-990715-17405 ft1 "alpha(1,3)fucosyltransfer 0.494 0.466 0.276 1.7e-11
UNIPROTKB|P21217361 FUT3 "Galactoside 3(4)-L-fucos 0.481 0.509 0.274 4.6e-11
DICTYBASE|DDB_G0284775777 fut2 "alpha-3/4-fucosyltransfe 0.505 0.248 0.288 7.5e-11
TAIR|locus:2094078 FUT11 "fucosyltransferase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1506 (535.2 bits), Expect = 1.9e-154, P = 1.9e-154
 Identities = 276/382 (72%), Positives = 329/382 (86%)

Query:     1 EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIV 60
             +++ C V C  G+  D+KPDA+FG+S QPGT +++RSMES+QYY ENN+AQARR+GY IV
Sbjct:   120 DFKSCSVDCVMGFTSDKKPDAAFGLSHQPGTLSIIRSMESAQYYQENNLAQARRKGYDIV 179

Query:    61 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVK 120
             MTTSLSSDVPVGYFSWAEYDIMAPVQPKTE ALAAAFISNC ARNFRLQALEAL K NVK
Sbjct:   180 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTEKALAAAFISNCAARNFRLQALEALMKTNVK 239

Query:   121 IDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALXXXXXXXXXXXXN 180
             IDSYGGCHRNRDG VEKVE LK YKFSLAFEN+NEEDYVTEKFFQ+L            N
Sbjct:   240 IDSYGGCHRNRDGSVEKVEALKHYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPN 299

Query:   181 IQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAA 240
             I++FAPSP S LHI++ +DVK+VAK MKYLA+NP+AYNQ+L WK+EGPSDSFKAL+DMAA
Sbjct:   300 IEEFAPSPDSFLHIKQMDDVKAVAKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAA 359

Query:   241 VHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSG 300
             VHSSCRLCI++AT+I+E+EE +P F++RPCKCTRGSETV+HLYVRERGRF M SIFL+ G
Sbjct:   360 VHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVYHLYVRERGRFDMESIFLKDG 419

Query:   301 SLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFN 360
             +LTL+ALESAVLAKF SL++ PIWK+ERP S+RG+ +L+++ I+P+GLTQRQALY FKF 
Sbjct:   420 NLTLEALESAVLAKFMSLRYEPIWKKERPASLRGDGKLRVHGIYPIGLTQRQALYNFKFE 479

Query:   361 GDDDLKRHIESSPCAKFEVIFV 382
             G+  L  HI+ +PC KFEV+FV
Sbjct:   480 GNSSLSTHIQRNPCPKFEVVFV 501




GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0008417 "fucosyltransferase activity" evidence=ISS
GO:0017083 "4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity" evidence=ISS
GO:0006487 "protein N-linked glycosylation" evidence=IDA
GO:0036065 "fucosylation" evidence=IDA
GO:0046920 "alpha-(1->3)-fucosyltransferase activity" evidence=IDA
TAIR|locus:2012217 FUT12 "fucosyltransferase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0293768 fut9 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0036485 FucTA "FucTA" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284467 fut1 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P51993 FUT6 "Alpha-(1,3)-fucosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0274297 fut3 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-990715-17 ft1 "alpha(1,3)fucosyltransferase gene 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P21217 FUT3 "Galactoside 3(4)-L-fucosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284775 fut2 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LJK1FUT11_ARATH2, ., 4, ., 1, ., 2, 1, 40.75391.00.7624yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
pfam00852353 pfam00852, Glyco_transf_10, Glycosyltransferase fa 5e-37
PLN03243260 PLN03243, PLN03243, haloacid dehalogenase-like hyd 9e-04
>gnl|CDD|216152 pfam00852, Glyco_transf_10, Glycosyltransferase family 10 (fucosyltransferase) Back     alignment and domain information
 Score =  136 bits (345), Expect = 5e-37
 Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 11/199 (5%)

Query: 61  MTTSLSSDVPV--GYF--SWAEYDIMAPVQPKTE-SALAAAFISNCGARNFRLQALEALE 115
           MT    SD+ V  GY        ++    +   + S L A  +SNC   + R++    L 
Sbjct: 142 MTYRRDSDIFVPYGYLVPLEGPEEVRVLPEILEKKSKLVAWVVSNCNEPSKRVKYYRELS 201

Query: 116 KENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVV 175
           K ++++D YG C  +       + TL +YKF LAFENS  +DY+TEK + AL AG+VPVV
Sbjct: 202 K-HIEVDVYGKCFGDPLPDGCYLPTLSQYKFYLAFENSLCKDYITEKLWNALAAGAVPVV 260

Query: 176 VGAP--NIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFK 233
           +G P  N ++F P P S +H+ +    K +A+ +K L +N + Y +   W+ +    + +
Sbjct: 261 LGPPRANYENFVP-PDSFIHVDDFASPKELAEYLKSLDKNDDEYRRYFEWRKKYRVANQR 319

Query: 234 ALVDMAAVHSSCRLCIYLA 252
            L         C+ C  L 
Sbjct: 320 LLSFWR--EPYCQACDRLQ 336


This family of Fucosyltransferases are the enzymes transferring fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is know as glycosyltransferase family 10. Length = 353

>gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 382
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 100.0
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 96.49
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 94.73
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 90.0
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=2.9e-67  Score=523.25  Aligned_cols=241  Identities=39%  Similarity=0.600  Sum_probs=209.0

Q ss_pred             ccEEEecCCCC--CCeE-Ee----------CC-CCCCCeEEEeccCCCccccccchhhhcCCCCcEEEEeeecCCCcccc
Q 038682            8 RCKFGYDDDRK--PDAS-FG----------MS-QQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGY   73 (382)
Q Consensus         8 ~C~~t~dr~~~--~DAv-f~----------l~-r~p~Q~~V~~s~Esp~~~~~~n~~~~~~~~fn~tMTyr~dSDi~~~Y   73 (382)
                      +|.+|.+|+..  +||| ||          +| |+|+|.||+++||||.+++.+...  ..+.||||||||+|||+++||
T Consensus        96 ~C~iT~~rs~~~~adAvlfh~~d~~~~~~~l~~R~p~q~~i~~s~ESP~~~~~~~~~--~~~~fN~T~Tyr~dSd~~~py  173 (372)
T KOG2619|consen   96 GCRITTNRSLFDSADAVLFHHRDIPKSPLPLPGRKPGQPWIWMSMESPSNSPGLSLI--DGRLFNWTMTYRRDSDLFVPY  173 (372)
T ss_pred             ceEEeCCccccCCCCEEEEeeccCCCCcccccCCCCCCceEEEeccCCCCCcccccc--ccccccceEEEeccCCCCCcc
Confidence            79999999974  5887 43          34 899999999999999987765443  223799999999999997776


Q ss_pred             c--cccc-ccccCCCCC--CcccceEEEEecCCccchHHHHHHHHHHhcCcceEEeCCCCC---CCCCchhHHhhhccce
Q 038682           74 F--SWAE-YDIMAPVQP--KTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHR---NRDGRVEKVETLKRYK  145 (382)
Q Consensus        74 ~--s~~~-~~~~~p~~~--K~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i~VD~yG~C~~---n~~~~~~k~e~l~~YK  145 (382)
                      |  .+.+ +..+.|..+  ..|.++++|++|||++++.|.+++++|+++ ++||+||+|++   +..+..++++++++||
T Consensus       174 gy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~~~~~~~~~~~~~~~s~YK  252 (372)
T KOG2619|consen  174 GYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRKNANRDPSDCLLETLSHYK  252 (372)
T ss_pred             ceEeecccCceecccccccccccceeeeeccccCcchHHHHHHHHHHhh-CceeeccccccccccCCCCCcceeecccce
Confidence            5  4544 666666653  567789999999999999999999999996 99999999997   4455567889999999


Q ss_pred             eEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhhhhhh
Q 038682          146 FSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKY  225 (382)
Q Consensus       146 FyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf~Wr~  225 (382)
                      ||||||||+|+||||||||+||.+|+||||+|++||++++| |+||||++||+||+|||+||++|++|+++|++||+||.
T Consensus       253 FyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~fvP-~~SfI~vdDF~s~~ela~ylk~L~~n~~~Y~~Yf~WR~  331 (372)
T KOG2619|consen  253 FYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENFVP-PDSFIHVDDFQSPQELAAYLKKLDKNPAAYLSYFEWRK  331 (372)
T ss_pred             EEEEecccCCcccccHHHHhhhhcCcccEEECCccccccCC-CcceEehhhcCCHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999 89999999999999999999999999999999999995


Q ss_pred             cCCCchHHHHHhhccCChhhHHHHHHHHhhhH
Q 038682          226 EGPSDSFKALVDMAAVHSSCRLCIYLATKIQE  257 (382)
Q Consensus       226 ~~~~~~~~~l~~~~~~~~~C~LC~~l~~~~r~  257 (382)
                      .     |+.....+..+++|+||.+|++..|+
T Consensus       332 ~-----~~~~~~~~~~~~~CrlC~~l~~~~r~  358 (372)
T KOG2619|consen  332 D-----YKVRLTSAWDSGFCRLCEKLQREPRN  358 (372)
T ss_pred             h-----hcccccccccchhhHHHHHHHhcccc
Confidence            4     44445555678999999999987764



>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
2nzw_A371 Crystal Structure Of Alpha1,3-Fucosyltransferase Le 4e-05
>pdb|2NZW|A Chain A, Crystal Structure Of Alpha1,3-Fucosyltransferase Length = 371 Back     alignment and structure

Iteration: 1

Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 16/143 (11%) Query: 95 AAFIS---NCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRV--EKVETLKRYKFSLA 149 A+F++ N RN AL ++E + GG RN G K E L +YKF+L Sbjct: 183 ASFVASNPNAPIRNAFYDALNSIEPV-----TGGGSVRNTLGYNVKNKNEFLSQYKFNLC 237 Query: 150 FENSNEEDYVTEKFFQALXXXXXXXXXXXXNI-QDFAPSPKSILHIREREDVKSVAKTMK 208 FEN+ YVTEK A ++ +DF +PKS +++ + ++ +K Sbjct: 238 FENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDF--NPKSFVNVHDFKNFDEAIDYIK 295 Query: 209 YLAENPEAYNQSLSWKYEGPSDS 231 YL + AY L YE P ++ Sbjct: 296 YLHTHKNAY---LDMLYENPLNT 315 Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 1e-34
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Length = 371 Back     alignment and structure
 Score =  130 bits (327), Expect = 1e-34
 Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 16/247 (6%)

Query: 43  YYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCG 102
             + N+     +     +      S             +     P      A+   SN  
Sbjct: 133 AESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLK-RGFASFVASNPN 191

Query: 103 A--RNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVT 160
           A  RN    AL ++E              N      K E L +YKF+L FEN+    YVT
Sbjct: 192 APIRNAFYDALNSIEPVTGGGSVRNTLGYNVK---NKNEFLSQYKFNLCFENTQGYGYVT 248

Query: 161 EKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220
           EK   A  + ++P+  G+P++      PKS +++ + ++       +KYL  +  AY   
Sbjct: 249 EKIIDAYFSHTIPIYWGSPSVAKDFN-PKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDM 307

Query: 221 LSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQERE--ETNPAFRKR----PCKCTR 274
           L      P ++           S  ++  +  T ++       NP    R    P     
Sbjct: 308 LYEN---PLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNPFIFCRDLNEPLVTIL 364

Query: 275 GSETVHH 281
                HH
Sbjct: 365 EHHHHHH 371


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 100.0
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 93.55
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
Probab=100.00  E-value=3.7e-58  Score=459.39  Aligned_cols=248  Identities=21%  Similarity=0.229  Sum_probs=196.0

Q ss_pred             cCCc-ccEEEecCCC--CCCeEEeCC----------CCCCCeEEEeccCCCccccc-cchhh----hcCCCCcEEEEeee
Q 038682            4 VCDV-RCKFGYDDDR--KPDASFGMS----------QQPGTDTVLRSMESSQYYAE-NNIAQ----ARRRGYTIVMTTSL   65 (382)
Q Consensus         4 ~C~v-~C~~t~dr~~--~~DAvf~l~----------r~p~Q~~V~~s~Esp~~~~~-~n~~~----~~~~~fn~tMTyr~   65 (382)
                      .|++ +|.+|.|++.  .+|.|||.+          |++.|.||++++|||.+... ..+..    ...+.||||||||+
T Consensus        49 ~c~~~~C~iT~dr~~~~~aDvVFh~~~~~~~~lp~~R~~~Q~fv~~~~EsP~~~~~d~~ig~d~~~~~~~~FN~TmtYr~  128 (371)
T 2nzw_A           49 FILSQRYTITLHQNPNEFSDLVFGNPLGSARKILSYQNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYLRMPLYYDR  128 (371)
T ss_dssp             HHHHTTSEEEEECCTTBCCSEEEECCCTHHHHHHHHHCSEEEECCSSSCCCCTTTCSEEEESSCCBCGGGEEECCHHHHH
T ss_pred             ccCCCCeEEeeCCCccccccEEEcCCCcccccCCCCCCCCCEEEEEeecCCccccccccccccccccCCCeEEEEEEeee
Confidence            4876 8999999986  568566643          36899999999999975532 01111    11456999999999


Q ss_pred             c-------CCCcccccc--cccccccCC-----------------CCCCcccceEEEEecCCccchHHHHHHHHHHhcCc
Q 038682           66 S-------SDVPVGYFS--WAEYDIMAP-----------------VQPKTESALAAAFISNCGARNFRLQALEALEKENV  119 (382)
Q Consensus        66 d-------SDi~~~Y~s--~~~~~~~~p-----------------~~~K~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i  119 (382)
                      |       |||+.||+.  +..+.+..|                 .....|+++|+||+|||.+ ..|.+|+++|+++ +
T Consensus       129 d~~~~~~~SDi~~pYg~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~K~k~v~wvvSnc~~-~~R~~~~~~L~k~-i  206 (371)
T 2nzw_A          129 LHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNA-PIRNAFYDALNSI-E  206 (371)
T ss_dssp             HHHHHHHTCBTTCSSCCCTTSGGGSSCCBSCHHHHCHHHHHHHTTSSCTTSSEEEEECCSCCCC-HHHHHHHHHHTTT-S
T ss_pred             ccccccccCceeccCccccccchhcccccccccccchhhhhhhhccccCCCceEEEEEEeCCCc-HHHHHHHHHHhCc-C
Confidence            9       999999985  211111111                 1123466799999999987 5799999999995 9


Q ss_pred             ceEEeCCCCCCCCC-chhHHhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCC
Q 038682          120 KIDSYGGCHRNRDG-RVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIRERE  198 (382)
Q Consensus       120 ~VD~yG~C~~n~~~-~~~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~  198 (382)
                      +||+||+|+++.+. ..+|.+++++||||||||||+|+||||||||+||.+|+||||+|++|+.+++| |+|||+++||+
T Consensus       207 ~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~P-p~SfI~~~dF~  285 (371)
T 2nzw_A          207 PVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFN-PKSFVNVHDFK  285 (371)
T ss_dssp             CCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSC-GGGSEEGGGSS
T ss_pred             CEeeCCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCC-CCceEEcccCC
Confidence            99999999986432 34688999999999999999999999999999999999999999999999999 89999999999


Q ss_pred             CHHHHHHHHHHHhcCHHHHHHhhhhhhcCCCchHHHHHhhccCChhhHHHHHHHHhhhH
Q 038682          199 DVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQE  257 (382)
Q Consensus       199 s~~eLA~yL~~L~~n~~~Y~~yf~Wr~~~~~~~~~~l~~~~~~~~~C~LC~~l~~~~r~  257 (382)
                      ||++||+||++|++|+++|++||.||....+......   ....+.|+||..+...+..
T Consensus       286 s~~~La~yL~~L~~n~~~Y~~y~~w~~~~~i~~~~~~---y~~~~~c~lc~~l~~~~~~  341 (371)
T 2nzw_A          286 NFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYF---YQNLSFKKILAFFKTILEN  341 (371)
T ss_dssp             SHHHHHHHHHHHHTCHHHHHHHHHSCSSCEETTEECC---GGGCCHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHhcCHHHHHHHHhcCCcccccccccc---ccccchhHHHHHHHHHhcC
Confidence            9999999999999999999999999854322211000   1123689999998764444



>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 382
d2nzwa1349 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase Fu 2e-35
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Length = 349 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]
 Score =  130 bits (329), Expect = 2e-35
 Identities = 52/256 (20%), Positives = 94/256 (36%), Gaps = 13/256 (5%)

Query: 15  DDRKPDASFGMSQQPGTDTVLRS-MESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGY 73
           +    D + G  +    D  LR  +   + + +          Y +   +  +   P   
Sbjct: 100 NFNLFDYAIGFDELDFNDRYLRMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHC 159

Query: 74  FSWAEYDIMAPVQP---KTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRN 130
           F     ++ A V       +   A+   SN  A   R    +AL      +   G     
Sbjct: 160 FKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPI-RNAFYDALNSIE-PVTGGGSVRNT 217

Query: 131 RDGRVE-KVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPK 189
               V+ K E L +YKF+L FEN+    YVTEK   A  + ++P+  G+P++      PK
Sbjct: 218 LGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFN-PK 276

Query: 190 SILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCI 249
           S +++ + ++       +KYL  +  AY   L      P ++           S  ++  
Sbjct: 277 SFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYEN---PLNTLDGKAYFYQNLSFKKILA 333

Query: 250 YLATKIQERE--ETNP 263
           +  T ++       NP
Sbjct: 334 FFKTILENDTIYHDNP 349


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 100.0
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]
Probab=100.00  E-value=6.1e-35  Score=287.82  Aligned_cols=135  Identities=27%  Similarity=0.365  Sum_probs=126.2

Q ss_pred             cccceEEEEecCCccchHHHHHHHHHHhcCcceEEeCCCCCCCCCc-hhHHhhhccceeEEeeecCCCCccchHHHHHHH
Q 038682           89 TESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGR-VEKVETLKRYKFSLAFENSNEEDYVTEKFFQAL  167 (382)
Q Consensus        89 ~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i~VD~yG~C~~n~~~~-~~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al  167 (382)
                      .|+++++|++|||.+ ..|.+++++|+++ .+||+||.|+++..+. .+|.+.|++|||+|||||+.|+||||||+|+||
T Consensus       178 ~K~kFcs~v~Sn~~~-~~R~~~~~~L~k~-~~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~  255 (349)
T d2nzwa1         178 LKRGFASFVASNPNA-PIRNAFYDALNSI-EPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAY  255 (349)
T ss_dssp             TSSEEEEECCSCCCC-HHHHHHHHHHTTT-SCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHH
T ss_pred             ccCceEEEEEcCCCC-chHHHHHHHHhcc-CeecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHHH
Confidence            466799999999964 4699999999996 9999999999987643 579999999999999999999999999999999


Q ss_pred             hcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhhhhhhc
Q 038682          168 VAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYE  226 (382)
Q Consensus       168 ~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf~Wr~~  226 (382)
                      .+|+||||||++++++++| |+|||++.||+|+++|+++|++|++|+++|++|+.|+..
T Consensus       256 ~~g~iPIy~G~~~i~~~f~-~~sfI~~~df~s~~el~~~i~~l~~n~~~Y~~~~~~~~~  313 (349)
T d2nzwa1         256 FSHTIPIYWGSPSVAKDFN-PKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPL  313 (349)
T ss_dssp             HTTCEEEEESCTTGGGTSC-GGGSEEGGGSSSHHHHHHHHHHHHTCHHHHHHHHHSCSS
T ss_pred             hCCeEEEEECCCcHHHcCC-CccEEEhhhCCCHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence            9999999999999999999 899999999999999999999999999999999999854