Citrus Sinensis ID: 038682
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 382 | ||||||
| 225428818 | 504 | PREDICTED: putative fucosyltransferase-l | 1.0 | 0.757 | 0.808 | 0.0 | |
| 224105555 | 523 | predicted protein [Populus trichocarpa] | 1.0 | 0.730 | 0.787 | 0.0 | |
| 255555451 | 525 | glycoprotein 3-alpha-l-fucosyltransferas | 1.0 | 0.727 | 0.787 | 0.0 | |
| 61845103 | 522 | alpha 1,3 fucosyltransferase [Populus tr | 0.997 | 0.729 | 0.785 | 0.0 | |
| 356500027 | 515 | PREDICTED: glycoprotein 3-alpha-L-fucosy | 1.0 | 0.741 | 0.790 | 0.0 | |
| 357475365 | 504 | Glycoprotein 3-alpha-L-fucosyltransferas | 1.0 | 0.757 | 0.780 | 0.0 | |
| 5702039 | 510 | Fuct c3 protein [Vigna radiata var. radi | 1.0 | 0.749 | 0.782 | 0.0 | |
| 37543464 | 505 | alpha 1,3 fucosyltransferase [Medicago s | 1.0 | 0.756 | 0.774 | 0.0 | |
| 356521510 | 516 | PREDICTED: glycoprotein 3-alpha-L-fucosy | 1.0 | 0.740 | 0.780 | 0.0 | |
| 37543456 | 506 | alpha 1,3 fucosyltransferase [Medicago s | 1.0 | 0.754 | 0.774 | 0.0 |
| >gi|225428818|ref|XP_002285245.1| PREDICTED: putative fucosyltransferase-like protein [Vitis vinifera] gi|297741274|emb|CBI32405.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/382 (80%), Positives = 347/382 (90%)
Query: 1 EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIV 60
EW+ C V CKF Y+ K DASFG+ Q GT +V+RSMES+QYY+EN I ARRRGY I+
Sbjct: 123 EWKTCAVGCKFEYNSHGKLDASFGIPQPAGTASVIRSMESAQYYSENKIDLARRRGYDII 182
Query: 61 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVK 120
MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESA+AAAFISNCGARNFRLQALEALEK NVK
Sbjct: 183 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESAIAAAFISNCGARNFRLQALEALEKANVK 242
Query: 121 IDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPN 180
IDSYGGCHRNRDGRV+KV+ LK YKFSLAFENSNEEDYVTEKFFQ+LVAGSVPVV+GAPN
Sbjct: 243 IDSYGGCHRNRDGRVDKVQALKHYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVIGAPN 302
Query: 181 IQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAA 240
IQDFAPSP SILHI+E +D + VAKTMKYLAE+PE YNQSL WKYEGPSDSFKALVDMAA
Sbjct: 303 IQDFAPSPGSILHIKELKDAEPVAKTMKYLAEHPEEYNQSLRWKYEGPSDSFKALVDMAA 362
Query: 241 VHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSG 300
VHSSCRLCI+LAT I+E+EE +P F+KRPCKCTRGSETV+HLY+RERGRF+M SIFLRSG
Sbjct: 363 VHSSCRLCIHLATAIREKEENSPGFQKRPCKCTRGSETVYHLYIRERGRFEMESIFLRSG 422
Query: 301 SLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFN 360
+LTL+AL+SA+L KFKSL HVPIWK+ERP+SIRG++ELK+YRI+PVGLTQRQALY FKF
Sbjct: 423 NLTLEALQSAILKKFKSLNHVPIWKEERPESIRGDNELKVYRIYPVGLTQRQALYTFKFE 482
Query: 361 GDDDLKRHIESSPCAKFEVIFV 382
GD DL+ H+ES+PCAKFEVIFV
Sbjct: 483 GDADLRSHVESNPCAKFEVIFV 504
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224105555|ref|XP_002313854.1| predicted protein [Populus trichocarpa] gi|222850262|gb|EEE87809.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255555451|ref|XP_002518762.1| glycoprotein 3-alpha-l-fucosyltransferase A, putative [Ricinus communis] gi|223542143|gb|EEF43687.1| glycoprotein 3-alpha-l-fucosyltransferase A, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|61845103|emb|CAI70373.1| alpha 1,3 fucosyltransferase [Populus tremula x Populus alba] | Back alignment and taxonomy information |
|---|
| >gi|356500027|ref|XP_003518836.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357475365|ref|XP_003607968.1| Glycoprotein 3-alpha-L-fucosyltransferase A [Medicago truncatula] gi|355509023|gb|AES90165.1| Glycoprotein 3-alpha-L-fucosyltransferase A [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|5702039|emb|CAB52254.1| Fuct c3 protein [Vigna radiata var. radiata] | Back alignment and taxonomy information |
|---|
| >gi|37543464|gb|AAL99371.1| alpha 1,3 fucosyltransferase [Medicago sativa] | Back alignment and taxonomy information |
|---|
| >gi|356521510|ref|XP_003529398.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|37543456|gb|AAL99370.1| alpha 1,3 fucosyltransferase [Medicago sativa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 382 | ||||||
| TAIR|locus:2094078 | 501 | FUT11 "fucosyltransferase 11" | 1.0 | 0.762 | 0.722 | 1.9e-154 | |
| TAIR|locus:2012217 | 513 | FUT12 "fucosyltransferase 12" | 0.994 | 0.740 | 0.710 | 5.4e-150 | |
| DICTYBASE|DDB_G0293768 | 555 | fut9 "alpha-3/4-fucosyltransfe | 0.840 | 0.578 | 0.307 | 1.2e-35 | |
| FB|FBgn0036485 | 503 | FucTA "FucTA" [Drosophila mela | 0.418 | 0.318 | 0.346 | 6e-15 | |
| DICTYBASE|DDB_G0284467 | 389 | fut1 "alpha-3/4-fucosyltransfe | 0.473 | 0.465 | 0.271 | 4.8e-13 | |
| UNIPROTKB|P51993 | 359 | FUT6 "Alpha-(1,3)-fucosyltrans | 0.523 | 0.557 | 0.272 | 9.2e-12 | |
| DICTYBASE|DDB_G0274297 | 501 | fut3 "alpha-3/4-fucosyltransfe | 0.518 | 0.395 | 0.278 | 1.3e-11 | |
| ZFIN|ZDB-GENE-990715-17 | 405 | ft1 "alpha(1,3)fucosyltransfer | 0.494 | 0.466 | 0.276 | 1.7e-11 | |
| UNIPROTKB|P21217 | 361 | FUT3 "Galactoside 3(4)-L-fucos | 0.481 | 0.509 | 0.274 | 4.6e-11 | |
| DICTYBASE|DDB_G0284775 | 777 | fut2 "alpha-3/4-fucosyltransfe | 0.505 | 0.248 | 0.288 | 7.5e-11 |
| TAIR|locus:2094078 FUT11 "fucosyltransferase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1506 (535.2 bits), Expect = 1.9e-154, P = 1.9e-154
Identities = 276/382 (72%), Positives = 329/382 (86%)
Query: 1 EWRVCDVRCKFGYDDDRKPDASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIV 60
+++ C V C G+ D+KPDA+FG+S QPGT +++RSMES+QYY ENN+AQARR+GY IV
Sbjct: 120 DFKSCSVDCVMGFTSDKKPDAAFGLSHQPGTLSIIRSMESAQYYQENNLAQARRKGYDIV 179
Query: 61 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVK 120
MTTSLSSDVPVGYFSWAEYDIMAPVQPKTE ALAAAFISNC ARNFRLQALEAL K NVK
Sbjct: 180 MTTSLSSDVPVGYFSWAEYDIMAPVQPKTEKALAAAFISNCAARNFRLQALEALMKTNVK 239
Query: 121 IDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALXXXXXXXXXXXXN 180
IDSYGGCHRNRDG VEKVE LK YKFSLAFEN+NEEDYVTEKFFQ+L N
Sbjct: 240 IDSYGGCHRNRDGSVEKVEALKHYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPN 299
Query: 181 IQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAA 240
I++FAPSP S LHI++ +DVK+VAK MKYLA+NP+AYNQ+L WK+EGPSDSFKAL+DMAA
Sbjct: 300 IEEFAPSPDSFLHIKQMDDVKAVAKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAA 359
Query: 241 VHSSCRLCIYLATKIQEREETNPAFRKRPCKCTRGSETVHHLYVRERGRFKMVSIFLRSG 300
VHSSCRLCI++AT+I+E+EE +P F++RPCKCTRGSETV+HLYVRERGRF M SIFL+ G
Sbjct: 360 VHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVYHLYVRERGRFDMESIFLKDG 419
Query: 301 SLTLKALESAVLAKFKSLKHVPIWKQERPKSIRGEDELKIYRIHPVGLTQRQALYEFKFN 360
+LTL+ALESAVLAKF SL++ PIWK+ERP S+RG+ +L+++ I+P+GLTQRQALY FKF
Sbjct: 420 NLTLEALESAVLAKFMSLRYEPIWKKERPASLRGDGKLRVHGIYPIGLTQRQALYNFKFE 479
Query: 361 GDDDLKRHIESSPCAKFEVIFV 382
G+ L HI+ +PC KFEV+FV
Sbjct: 480 GNSSLSTHIQRNPCPKFEVVFV 501
|
|
| TAIR|locus:2012217 FUT12 "fucosyltransferase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0293768 fut9 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0036485 FucTA "FucTA" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0284467 fut1 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P51993 FUT6 "Alpha-(1,3)-fucosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0274297 fut3 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-990715-17 ft1 "alpha(1,3)fucosyltransferase gene 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P21217 FUT3 "Galactoside 3(4)-L-fucosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0284775 fut2 "alpha-3/4-fucosyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 382 | |||
| pfam00852 | 353 | pfam00852, Glyco_transf_10, Glycosyltransferase fa | 5e-37 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 9e-04 |
| >gnl|CDD|216152 pfam00852, Glyco_transf_10, Glycosyltransferase family 10 (fucosyltransferase) | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 5e-37
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 61 MTTSLSSDVPV--GYF--SWAEYDIMAPVQPKTE-SALAAAFISNCGARNFRLQALEALE 115
MT SD+ V GY ++ + + S L A +SNC + R++ L
Sbjct: 142 MTYRRDSDIFVPYGYLVPLEGPEEVRVLPEILEKKSKLVAWVVSNCNEPSKRVKYYRELS 201
Query: 116 KENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVV 175
K ++++D YG C + + TL +YKF LAFENS +DY+TEK + AL AG+VPVV
Sbjct: 202 K-HIEVDVYGKCFGDPLPDGCYLPTLSQYKFYLAFENSLCKDYITEKLWNALAAGAVPVV 260
Query: 176 VGAP--NIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFK 233
+G P N ++F P P S +H+ + K +A+ +K L +N + Y + W+ + + +
Sbjct: 261 LGPPRANYENFVP-PDSFIHVDDFASPKELAEYLKSLDKNDDEYRRYFEWRKKYRVANQR 319
Query: 234 ALVDMAAVHSSCRLCIYLA 252
L C+ C L
Sbjct: 320 LLSFWR--EPYCQACDRLQ 336
|
This family of Fucosyltransferases are the enzymes transferring fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is know as glycosyltransferase family 10. Length = 353 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 382 | |||
| KOG2619 | 372 | consensus Fucosyltransferase [Carbohydrate transpo | 100.0 | |
| PF00852 | 349 | Glyco_transf_10: Glycosyltransferase family 10 (fu | 100.0 | |
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 96.49 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 94.73 | |
| KOG1021 | 464 | consensus Acetylglucosaminyltransferase EXT1/exost | 90.0 |
| >KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-67 Score=523.25 Aligned_cols=241 Identities=39% Similarity=0.600 Sum_probs=209.0
Q ss_pred ccEEEecCCCC--CCeE-Ee----------CC-CCCCCeEEEeccCCCccccccchhhhcCCCCcEEEEeeecCCCcccc
Q 038682 8 RCKFGYDDDRK--PDAS-FG----------MS-QQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGY 73 (382)
Q Consensus 8 ~C~~t~dr~~~--~DAv-f~----------l~-r~p~Q~~V~~s~Esp~~~~~~n~~~~~~~~fn~tMTyr~dSDi~~~Y 73 (382)
+|.+|.+|+.. +||| || +| |+|+|.||+++||||.+++.+... ..+.||||||||+|||+++||
T Consensus 96 ~C~iT~~rs~~~~adAvlfh~~d~~~~~~~l~~R~p~q~~i~~s~ESP~~~~~~~~~--~~~~fN~T~Tyr~dSd~~~py 173 (372)
T KOG2619|consen 96 GCRITTNRSLFDSADAVLFHHRDIPKSPLPLPGRKPGQPWIWMSMESPSNSPGLSLI--DGRLFNWTMTYRRDSDLFVPY 173 (372)
T ss_pred ceEEeCCccccCCCCEEEEeeccCCCCcccccCCCCCCceEEEeccCCCCCcccccc--ccccccceEEEeccCCCCCcc
Confidence 79999999974 5887 43 34 899999999999999987765443 223799999999999997776
Q ss_pred c--cccc-ccccCCCCC--CcccceEEEEecCCccchHHHHHHHHHHhcCcceEEeCCCCC---CCCCchhHHhhhccce
Q 038682 74 F--SWAE-YDIMAPVQP--KTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHR---NRDGRVEKVETLKRYK 145 (382)
Q Consensus 74 ~--s~~~-~~~~~p~~~--K~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i~VD~yG~C~~---n~~~~~~k~e~l~~YK 145 (382)
| .+.+ +..+.|..+ ..|.++++|++|||++++.|.+++++|+++ ++||+||+|++ +..+..++++++++||
T Consensus 174 gy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~~~~~~~~~~~~~~~s~YK 252 (372)
T KOG2619|consen 174 GYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRKNANRDPSDCLLETLSHYK 252 (372)
T ss_pred ceEeecccCceecccccccccccceeeeeccccCcchHHHHHHHHHHhh-CceeeccccccccccCCCCCcceeecccce
Confidence 5 4544 666666653 567789999999999999999999999996 99999999997 4455567889999999
Q ss_pred eEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhhhhhh
Q 038682 146 FSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKY 225 (382)
Q Consensus 146 FyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf~Wr~ 225 (382)
||||||||+|+||||||||+||.+|+||||+|++||++++| |+||||++||+||+|||+||++|++|+++|++||+||.
T Consensus 253 FyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~fvP-~~SfI~vdDF~s~~ela~ylk~L~~n~~~Y~~Yf~WR~ 331 (372)
T KOG2619|consen 253 FYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENFVP-PDSFIHVDDFQSPQELAAYLKKLDKNPAAYLSYFEWRK 331 (372)
T ss_pred EEEEecccCCcccccHHHHhhhhcCcccEEECCccccccCC-CcceEehhhcCCHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999999999999995
Q ss_pred cCCCchHHHHHhhccCChhhHHHHHHHHhhhH
Q 038682 226 EGPSDSFKALVDMAAVHSSCRLCIYLATKIQE 257 (382)
Q Consensus 226 ~~~~~~~~~l~~~~~~~~~C~LC~~l~~~~r~ 257 (382)
. |+.....+..+++|+||.+|++..|+
T Consensus 332 ~-----~~~~~~~~~~~~~CrlC~~l~~~~r~ 358 (372)
T KOG2619|consen 332 D-----YKVRLTSAWDSGFCRLCEKLQREPRN 358 (372)
T ss_pred h-----hcccccccccchhhHHHHHHHhcccc
Confidence 4 44445555678999999999987764
|
|
| >PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
| >KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 382 | ||||
| 2nzw_A | 371 | Crystal Structure Of Alpha1,3-Fucosyltransferase Le | 4e-05 |
| >pdb|2NZW|A Chain A, Crystal Structure Of Alpha1,3-Fucosyltransferase Length = 371 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 382 | |||
| 2nzw_A | 371 | Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H | 1e-34 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Length = 371 | Back alignment and structure |
|---|
Score = 130 bits (327), Expect = 1e-34
Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 16/247 (6%)
Query: 43 YYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESALAAAFISNCG 102
+ N+ + + S + P A+ SN
Sbjct: 133 AESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLK-RGFASFVASNPN 191
Query: 103 A--RNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVT 160
A RN AL ++E N K E L +YKF+L FEN+ YVT
Sbjct: 192 APIRNAFYDALNSIEPVTGGGSVRNTLGYNVK---NKNEFLSQYKFNLCFENTQGYGYVT 248
Query: 161 EKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220
EK A + ++P+ G+P++ PKS +++ + ++ +KYL + AY
Sbjct: 249 EKIIDAYFSHTIPIYWGSPSVAKDFN-PKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDM 307
Query: 221 LSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQERE--ETNPAFRKR----PCKCTR 274
L P ++ S ++ + T ++ NP R P
Sbjct: 308 LYEN---PLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNPFIFCRDLNEPLVTIL 364
Query: 275 GSETVHH 281
HH
Sbjct: 365 EHHHHHH 371
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 382 | |||
| 2nzw_A | 371 | Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H | 100.0 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 93.55 |
| >2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-58 Score=459.39 Aligned_cols=248 Identities=21% Similarity=0.229 Sum_probs=196.0
Q ss_pred cCCc-ccEEEecCCC--CCCeEEeCC----------CCCCCeEEEeccCCCccccc-cchhh----hcCCCCcEEEEeee
Q 038682 4 VCDV-RCKFGYDDDR--KPDASFGMS----------QQPGTDTVLRSMESSQYYAE-NNIAQ----ARRRGYTIVMTTSL 65 (382)
Q Consensus 4 ~C~v-~C~~t~dr~~--~~DAvf~l~----------r~p~Q~~V~~s~Esp~~~~~-~n~~~----~~~~~fn~tMTyr~ 65 (382)
.|++ +|.+|.|++. .+|.|||.+ |++.|.||++++|||.+... ..+.. ...+.||||||||+
T Consensus 49 ~c~~~~C~iT~dr~~~~~aDvVFh~~~~~~~~lp~~R~~~Q~fv~~~~EsP~~~~~d~~ig~d~~~~~~~~FN~TmtYr~ 128 (371)
T 2nzw_A 49 FILSQRYTITLHQNPNEFSDLVFGNPLGSARKILSYQNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYLRMPLYYDR 128 (371)
T ss_dssp HHHHTTSEEEEECCTTBCCSEEEECCCTHHHHHHHHHCSEEEECCSSSCCCCTTTCSEEEESSCCBCGGGEEECCHHHHH
T ss_pred ccCCCCeEEeeCCCccccccEEEcCCCcccccCCCCCCCCCEEEEEeecCCccccccccccccccccCCCeEEEEEEeee
Confidence 4876 8999999986 568566643 36899999999999975532 01111 11456999999999
Q ss_pred c-------CCCcccccc--cccccccCC-----------------CCCCcccceEEEEecCCccchHHHHHHHHHHhcCc
Q 038682 66 S-------SDVPVGYFS--WAEYDIMAP-----------------VQPKTESALAAAFISNCGARNFRLQALEALEKENV 119 (382)
Q Consensus 66 d-------SDi~~~Y~s--~~~~~~~~p-----------------~~~K~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i 119 (382)
| |||+.||+. +..+.+..| .....|+++|+||+|||.+ ..|.+|+++|+++ +
T Consensus 129 d~~~~~~~SDi~~pYg~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~K~k~v~wvvSnc~~-~~R~~~~~~L~k~-i 206 (371)
T 2nzw_A 129 LHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNA-PIRNAFYDALNSI-E 206 (371)
T ss_dssp HHHHHHHTCBTTCSSCCCTTSGGGSSCCBSCHHHHCHHHHHHHTTSSCTTSSEEEEECCSCCCC-HHHHHHHHHHTTT-S
T ss_pred ccccccccCceeccCccccccchhcccccccccccchhhhhhhhccccCCCceEEEEEEeCCCc-HHHHHHHHHHhCc-C
Confidence 9 999999985 211111111 1123466799999999987 5799999999995 9
Q ss_pred ceEEeCCCCCCCCC-chhHHhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCC
Q 038682 120 KIDSYGGCHRNRDG-RVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIRERE 198 (382)
Q Consensus 120 ~VD~yG~C~~n~~~-~~~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~ 198 (382)
+||+||+|+++.+. ..+|.+++++||||||||||+|+||||||||+||.+|+||||+|++|+.+++| |+|||+++||+
T Consensus 207 ~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~P-p~SfI~~~dF~ 285 (371)
T 2nzw_A 207 PVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFN-PKSFVNVHDFK 285 (371)
T ss_dssp CCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSC-GGGSEEGGGSS
T ss_pred CEeeCCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCC-CCceEEcccCC
Confidence 99999999986432 34688999999999999999999999999999999999999999999999999 89999999999
Q ss_pred CHHHHHHHHHHHhcCHHHHHHhhhhhhcCCCchHHHHHhhccCChhhHHHHHHHHhhhH
Q 038682 199 DVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQE 257 (382)
Q Consensus 199 s~~eLA~yL~~L~~n~~~Y~~yf~Wr~~~~~~~~~~l~~~~~~~~~C~LC~~l~~~~r~ 257 (382)
||++||+||++|++|+++|++||.||....+...... ....+.|+||..+...+..
T Consensus 286 s~~~La~yL~~L~~n~~~Y~~y~~w~~~~~i~~~~~~---y~~~~~c~lc~~l~~~~~~ 341 (371)
T 2nzw_A 286 NFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYF---YQNLSFKKILAFFKTILEN 341 (371)
T ss_dssp SHHHHHHHHHHHHTCHHHHHHHHHSCSSCEETTEECC---GGGCCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHhcCCcccccccccc---ccccchhHHHHHHHHHhcC
Confidence 9999999999999999999999999854322211000 1123689999998764444
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 382 | ||||
| d2nzwa1 | 349 | c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase Fu | 2e-35 |
| >d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Length = 349 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: FucT-like domain: Alpha1,3-fucosyltransferase FucT species: Helicobacter pylori [TaxId: 210]
Score = 130 bits (329), Expect = 2e-35
Identities = 52/256 (20%), Positives = 94/256 (36%), Gaps = 13/256 (5%)
Query: 15 DDRKPDASFGMSQQPGTDTVLRS-MESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGY 73
+ D + G + D LR + + + + Y + + + P
Sbjct: 100 NFNLFDYAIGFDELDFNDRYLRMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHC 159
Query: 74 FSWAEYDIMAPVQP---KTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRN 130
F ++ A V + A+ SN A R +AL + G
Sbjct: 160 FKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPI-RNAFYDALNSIE-PVTGGGSVRNT 217
Query: 131 RDGRVE-KVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPK 189
V+ K E L +YKF+L FEN+ YVTEK A + ++P+ G+P++ PK
Sbjct: 218 LGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFN-PK 276
Query: 190 SILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCI 249
S +++ + ++ +KYL + AY L P ++ S ++
Sbjct: 277 SFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYEN---PLNTLDGKAYFYQNLSFKKILA 333
Query: 250 YLATKIQERE--ETNP 263
+ T ++ NP
Sbjct: 334 FFKTILENDTIYHDNP 349
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 382 | |||
| d2nzwa1 | 349 | Alpha1,3-fucosyltransferase FucT {Helicobacter pyl | 100.0 |
| >d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: FucT-like domain: Alpha1,3-fucosyltransferase FucT species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=6.1e-35 Score=287.82 Aligned_cols=135 Identities=27% Similarity=0.365 Sum_probs=126.2
Q ss_pred cccceEEEEecCCccchHHHHHHHHHHhcCcceEEeCCCCCCCCCc-hhHHhhhccceeEEeeecCCCCccchHHHHHHH
Q 038682 89 TESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGR-VEKVETLKRYKFSLAFENSNEEDYVTEKFFQAL 167 (382)
Q Consensus 89 ~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i~VD~yG~C~~n~~~~-~~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al 167 (382)
.|+++++|++|||.+ ..|.+++++|+++ .+||+||.|+++..+. .+|.+.|++|||+|||||+.|+||||||+|+||
T Consensus 178 ~K~kFcs~v~Sn~~~-~~R~~~~~~L~k~-~~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~ 255 (349)
T d2nzwa1 178 LKRGFASFVASNPNA-PIRNAFYDALNSI-EPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAY 255 (349)
T ss_dssp TSSEEEEECCSCCCC-HHHHHHHHHHTTT-SCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHH
T ss_pred ccCceEEEEEcCCCC-chHHHHHHHHhcc-CeecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHHH
Confidence 466799999999964 4699999999996 9999999999987643 579999999999999999999999999999999
Q ss_pred hcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhhhhhhc
Q 038682 168 VAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYE 226 (382)
Q Consensus 168 ~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf~Wr~~ 226 (382)
.+|+||||||++++++++| |+|||++.||+|+++|+++|++|++|+++|++|+.|+..
T Consensus 256 ~~g~iPIy~G~~~i~~~f~-~~sfI~~~df~s~~el~~~i~~l~~n~~~Y~~~~~~~~~ 313 (349)
T d2nzwa1 256 FSHTIPIYWGSPSVAKDFN-PKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPL 313 (349)
T ss_dssp HTTCEEEEESCTTGGGTSC-GGGSEEGGGSSSHHHHHHHHHHHHTCHHHHHHHHHSCSS
T ss_pred hCCeEEEEECCCcHHHcCC-CccEEEhhhCCCHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 9999999999999999999 899999999999999999999999999999999999854
|