Citrus Sinensis ID: 038755

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
MDSVCSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLCLTVNKHSSITYR
ccccccccccHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccHHHHHcccccccEEEEEEcccccHHHHHHHHHHccccEEEEEEEEccEEEEEEEEccccccccccccccEEEccccccccccccEEEEEEEEEccEEEEEEccccccccccHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEccccccccEEEEEEEEcccccccccccEEEEEEEEEEEEcccccc
cccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccHHHHHcccccccEEEEEEHHHHHccHHHHHcccccHHHHHHHHHHHHHHHHEEEEcHHHHHHHHHHEHHccccccccccccccccEEEEEEEEcccEEEEEcHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccEEcccccHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccEEccccEEEccccccccccccccccccccEEEEcccccccccccEEEEcccccccccccccEEEEEEEEEEEEcHHHcc
MDSVCSNVITREGIQTVAVEnhcnfsrnsdlCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLfvfgprnseplvkelkldkysvggfggfigrKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLfsknqnpyaepaqITVWLGDLNyriqglnthpvrNIIHKDLQKLLTSKDQLLQEAERGqifngycegsltfkptykynigssdydtsykvrvpswtdrilfkiddpdkiNAALHSYesiddiyssdhkpvkaHLCLTvnkhssityr
mdsvcsnvitregiqtvavENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGgfggfigrkkgAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLfsknqnpyaEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIgssdydtsykVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLcltvnkhssityr
MDSVCSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVggfggfigrkkgAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHsyesiddiyssdHKPVKAHLCLTVNKHSSITYR
****CSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLCLTVN********
*******************E****FSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFS*****YAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLCLTVNKHSS****
MDSVCSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLCLTVNKHSSITYR
**SVCSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLCLTVNKHSS****
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MDSVCSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLCLTVNKHSSITYR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query321 2.2.26 [Sep-21-2011]
Q5EAF2334 Type I inositol 1,4,5-tri yes no 0.953 0.916 0.645 1e-119
P59644 1003 Phosphatidylinositol 4,5- yes no 0.850 0.272 0.334 3e-36
Q9JMC1 1001 Phosphatidylinositol 4,5- yes no 0.850 0.272 0.324 3e-35
Q15735 1006 Phosphatidylinositol 4,5- yes no 0.850 0.271 0.324 6e-35
P50942 1183 Polyphosphatidylinositol yes no 0.890 0.241 0.347 1e-34
Q8K337 993 Type II inositol 1,4,5-tr no no 0.912 0.295 0.308 1e-32
O18964 1324 Synaptojanin-1 (Fragment) no no 0.875 0.212 0.286 2e-32
Q62910 1574 Synaptojanin-1 OS=Rattus no no 0.878 0.179 0.287 3e-32
Q8CHC4 1574 Synaptojanin-1 OS=Mus mus no no 0.878 0.179 0.287 4e-32
O43426 1573 Synaptojanin-1 OS=Homo sa no no 0.875 0.178 0.283 6e-32
>sp|Q5EAF2|IP5PB_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 11 OS=Arabidopsis thaliana GN=At1g47510 PE=2 SV=1 Back     alignment and function desciption
 Score =  429 bits (1104), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/310 (64%), Positives = 246/310 (79%), Gaps = 4/310 (1%)

Query: 1   MDSVCSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFD 60
           + S   N  + +GI+T+   N C+FSR +DLCI ++TWNMNG VSYEDLVEL+G  RKFD
Sbjct: 24  IGSFAKNSSSHDGIKTIEAVNSCSFSRKADLCIRIITWNMNGNVSYEDLVELVGKERKFD 83

Query: 61  LLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYS 120
           LL+VGLQE P+ N+ +LL+ A + TH+L  KA +QS+QL++FGP+NS  LVKELK ++YS
Sbjct: 84  LLVVGLQEAPKANVDQLLQTASSPTHELLGKAKLQSVQLYLFGPKNSHTLVKELKAERYS 143

Query: 121 VGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQN 180
           VGG GG IGRKKGAVAIRINY  I MVFISCHLSAHA+ V++RN+E RHI +SL  +++ 
Sbjct: 144 VGGCGGLIGRKKGAVAIRINYDDIKMVFISCHLSAHAKKVDQRNTELRHIANSLLPRDK- 202

Query: 181 PYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCE 240
                  +TVWLGDLNYRIQ ++ HPVR++I   LQ +L SKDQLLQEAERG+IF GY E
Sbjct: 203 ---RKRDLTVWLGDLNYRIQDVSNHPVRSLIQNHLQSVLVSKDQLLQEAERGEIFKGYSE 259

Query: 241 GSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSD 300
           G+L FKPTYKYN+GSSDYDTS+K+RVP+WTDRILFKI D D I A LHSY+SID +Y SD
Sbjct: 260 GTLGFKPTYKYNVGSSDYDTSHKIRVPAWTDRILFKIQDTDNIQATLHSYDSIDQVYGSD 319

Query: 301 HKPVKAHLCL 310
           HKPVKA LCL
Sbjct: 320 HKPVKADLCL 329
Has phosphatase activity toward PtdIns(4,5)P2, and in vitro toward PtdIns(3,5)P2 and PtdIns(3,4,5)P3. Can not dephosphorylate PtdIns(5)P, Ins(1,4,5)P3 and Ins(1,3,4,5)P4.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 5EC: 6
>sp|P59644|PI5PA_MOUSE Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A OS=Mus musculus GN=Inpp5j PE=1 SV=2 Back     alignment and function description
>sp|Q9JMC1|PI5PA_RAT Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A OS=Rattus norvegicus GN=Inpp5j PE=1 SV=1 Back     alignment and function description
>sp|Q15735|PI5PA_HUMAN Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A OS=Homo sapiens GN=INPP5J PE=2 SV=3 Back     alignment and function description
>sp|P50942|INP52_YEAST Polyphosphatidylinositol phosphatase INP52 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=INP52 PE=1 SV=1 Back     alignment and function description
>sp|Q8K337|I5P2_MOUSE Type II inositol 1,4,5-trisphosphate 5-phosphatase OS=Mus musculus GN=Inpp5b PE=1 SV=1 Back     alignment and function description
>sp|O18964|SYNJ1_BOVIN Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|Q62910|SYNJ1_RAT Synaptojanin-1 OS=Rattus norvegicus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|Q8CHC4|SYNJ1_MOUSE Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|O43426|SYNJ1_HUMAN Synaptojanin-1 OS=Homo sapiens GN=SYNJ1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
255538532341 protein with unknown function [Ricinus c 0.984 0.926 0.757 1e-142
224137258319 predicted protein [Populus trichocarpa] 0.975 0.981 0.751 1e-138
302142426318 unnamed protein product [Vitis vinifera] 0.956 0.965 0.727 1e-134
225458410344 PREDICTED: type I inositol-1,4,5-trispho 0.956 0.892 0.727 1e-133
356553905322 PREDICTED: type I inositol-1,4,5-trispho 0.940 0.937 0.685 1e-125
357438067335 Type I inositol-1,4,5-trisphosphate 5-ph 0.928 0.889 0.685 1e-123
42562585334 Type I inositol-1,4,5-trisphosphate 5-ph 0.953 0.916 0.645 1e-118
5668810331 Contains similarity to gb|M74161 inosito 0.953 0.924 0.645 1e-118
357121102339 PREDICTED: type I inositol-1,4,5-trispho 0.947 0.896 0.621 1e-117
297852340334 endonuclease/exonuclease/phosphatase fam 0.953 0.916 0.635 1e-117
>gi|255538532|ref|XP_002510331.1| protein with unknown function [Ricinus communis] gi|223551032|gb|EEF52518.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/317 (75%), Positives = 279/317 (88%), Gaps = 1/317 (0%)

Query: 1   MDSVCSN-VITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKF 59
           MDS  SN V T +GI+TV V++ C+FSRNSDLCI +VTWNMNG+VSY+DLVEL+GSNRKF
Sbjct: 22  MDSTMSNHVATHDGIKTVEVDHRCDFSRNSDLCISIVTWNMNGKVSYQDLVELVGSNRKF 81

Query: 60  DLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKY 119
           DLL+VG QEVPR NIARLL+  + +TH L  K IMQSLQL+VFGP NS   +KE+K+DK+
Sbjct: 82  DLLVVGFQEVPRKNIARLLQAVLLDTHILQGKVIMQSLQLYVFGPLNSGLFIKEMKVDKH 141

Query: 120 SVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQ 179
           SVGG GG I R KGAVAI I+YKGI MVFI+CHLSAHARNVEERNS+CRHI H+LFS+  
Sbjct: 142 SVGGLGGLIRRTKGAVAIYISYKGIRMVFIACHLSAHARNVEERNSQCRHISHNLFSRTW 201

Query: 180 NPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYC 239
           NPYA PAQ+TVWLGDLNYRIQG++THP RN+I +DLQ+LLTSKDQLL+EAERGQ+FNGYC
Sbjct: 202 NPYARPAQVTVWLGDLNYRIQGIDTHPARNLIQEDLQRLLTSKDQLLREAERGQVFNGYC 261

Query: 240 EGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSS 299
           EG+LTFKPTYKYN+GSS+YDTSYKVRVPSWTDRILFKI+D DKI+A LH YESIDDI+SS
Sbjct: 262 EGTLTFKPTYKYNVGSSNYDTSYKVRVPSWTDRILFKIEDVDKISANLHCYESIDDIHSS 321

Query: 300 DHKPVKAHLCLTVNKHS 316
           DHKPVKAHLCL V++ S
Sbjct: 322 DHKPVKAHLCLKVDEQS 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224137258|ref|XP_002327081.1| predicted protein [Populus trichocarpa] gi|222835396|gb|EEE73831.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|302142426|emb|CBI19629.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225458410|ref|XP_002281898.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase 11-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356553905|ref|XP_003545291.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|357438067|ref|XP_003589309.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase [Medicago truncatula] gi|355478357|gb|AES59560.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase [Medicago truncatula] Back     alignment and taxonomy information
>gi|42562585|ref|NP_175182.2| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis thaliana] gi|67460994|sp|Q5EAF2.1|IP5PB_ARATH RecName: Full=Type I inositol 1,4,5-trisphosphate 5-phosphatase 11; Short=At5PTase11 gi|58743294|gb|AAW81725.1| At1g47510 [Arabidopsis thaliana] gi|61656149|gb|AAX49377.1| At1g47510 [Arabidopsis thaliana] gi|332194058|gb|AEE32179.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|5668810|gb|AAD46036.1|AC007519_21 Contains similarity to gb|M74161 inositol polyphosphate 5-phosphatase from Homo sapiens and contains a PF|00783 inositol polyphosphate phosphatase catalytic domain [Arabidopsis thaliana] gi|48527527|gb|AAT45895.1| phospholipid-specific inositol polyphosphate 5-phosphatase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357121102|ref|XP_003562260.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase 11-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|297852340|ref|XP_002894051.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297339893|gb|EFH70310.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
TAIR|locus:2015388334 5PTASE11 "inositol polyphospha 0.947 0.910 0.590 2.9e-96
ZFIN|ZDB-GENE-091117-4 789 inpp5ja "inositol polyphosphat 0.775 0.315 0.322 1.8e-29
UNIPROTKB|F1N1U1 1449 SYNJ2 "Uncharacterized protein 0.688 0.152 0.327 1.8e-29
UNIPROTKB|F1N8B6 465 INPP5K "Uncharacterized protei 0.794 0.548 0.310 4.4e-29
SGD|S000005050 1183 INP52 "Polyphosphatidylinosito 0.433 0.117 0.432 4.6e-29
ZFIN|ZDB-GENE-070410-101 456 zgc:162883 "zgc:162883" [Danio 0.750 0.528 0.320 1.2e-28
ZFIN|ZDB-GENE-030131-9180 1558 synj1 "synaptojanin 1" [Danio 0.691 0.142 0.313 1.2e-28
UNIPROTKB|E1BD68 1210 SYNJ1 "Synaptojanin-1" [Bos ta 0.691 0.183 0.317 2e-28
UNIPROTKB|O18964 1324 SYNJ1 "Synaptojanin-1" [Bos ta 0.691 0.167 0.317 2.1e-28
UNIPROTKB|F1MC12 1300 SYNJ1 "Synaptojanin-1" [Bos ta 0.691 0.170 0.317 2.5e-28
TAIR|locus:2015388 5PTASE11 "inositol polyphosphate 5-phosphatase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
 Identities = 182/308 (59%), Positives = 225/308 (73%)

Query:     3 SVCSNVITREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRKFDLL 62
             S   N  + +GI+T+   N C+FSR +DLCI ++TWNMNG VSYEDLVEL+G  RKFDLL
Sbjct:    26 SFAKNSSSHDGIKTIEAVNSCSFSRKADLCIRIITWNMNGNVSYEDLVELVGKERKFDLL 85

Query:    63 IVGLQEVPRNNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVX 122
             +VGLQE P+ N+ +LL+ A + TH+L  KA +QS+QL++FGP+NS  LVKELK ++YSV 
Sbjct:    86 VVGLQEAPKANVDQLLQTASSPTHELLGKAKLQSVQLYLFGPKNSHTLVKELKAERYSVG 145

Query:   123 XXXXXXXXXXXAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPY 182
                        AVAIRINY  I MVFISCHLSAHA+ V++RN+E RHI +SL  +++   
Sbjct:   146 GCGGLIGRKKGAVAIRINYDDIKMVFISCHLSAHAKKVDQRNTELRHIANSLLPRDKRK- 204

Query:   183 AEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGS 242
                  +TVWLGDLNYRIQ ++ HPVR++I   LQ +L SKDQLLQEAERG+IF GY EG+
Sbjct:   205 ---RDLTVWLGDLNYRIQDVSNHPVRSLIQNHLQSVLVSKDQLLQEAERGEIFKGYSEGT 261

Query:   243 LTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHXXXXXXXXXXXXHK 302
             L FKPTYKYN+GSSDYDTS+K+RVP+WTDRILFKI D D I A LH            HK
Sbjct:   262 LGFKPTYKYNVGSSDYDTSHKIRVPAWTDRILFKIQDTDNIQATLHSYDSIDQVYGSDHK 321

Query:   303 PVKAHLCL 310
             PVKA LCL
Sbjct:   322 PVKADLCL 329
GO:0005737 "cytoplasm" evidence=ISM
GO:0016787 "hydrolase activity" evidence=ISS
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA
GO:0004439 "phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity" evidence=IDA
GO:0009733 "response to auxin stimulus" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0034485 "phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity" evidence=IDA
GO:0043813 "phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity" evidence=IDA
GO:0046856 "phosphatidylinositol dephosphorylation" evidence=IDA
ZFIN|ZDB-GENE-091117-4 inpp5ja "inositol polyphosphate-5-phosphatase Ja" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1N1U1 SYNJ2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1N8B6 INPP5K "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
SGD|S000005050 INP52 "Polyphosphatidylinositol phosphatase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-101 zgc:162883 "zgc:162883" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9180 synj1 "synaptojanin 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BD68 SYNJ1 "Synaptojanin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O18964 SYNJ1 "Synaptojanin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MC12 SYNJ1 "Synaptojanin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5EAF2IP5PB_ARATH3, ., 1, ., 3, ., 5, 60.64510.95320.9161yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_scaffold_40000073
hypothetical protein (319 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
cd09074299 cd09074, INPP5c, Catalytic domain of inositol poly 7e-65
cd09094300 cd09094, INPP5c_INPP5J-like, Catalytic inositol po 9e-60
cd09093292 cd09093, INPP5c_INPP5B, Catalytic inositol polypho 3e-59
smart00128306 smart00128, IPPc, Inositol polyphosphate phosphata 6e-58
cd09090291 cd09090, INPP5c_ScInp51p-like, Catalytic inositol 9e-57
cd09095298 cd09095, INPP5c_INPP5E-like, Catalytic inositol po 2e-49
COG5411 460 COG5411, COG5411, Phosphatidylinositol 5-phosphate 3e-48
cd09089328 cd09089, INPP5c_Synj, Catalytic inositol polyphosp 1e-42
cd09099336 cd09099, INPP5c_Synj2, Catalytic inositol polyphos 6e-38
cd09098336 cd09098, INPP5c_Synj1, Catalytic inositol polyphos 5e-37
cd09091307 cd09091, INPP5c_SHIP, Catalytic inositol polyphosp 2e-27
cd09100307 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol p 2e-25
cd09101304 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol p 2e-25
PLN03191621 PLN03191, PLN03191, Type I inositol-1,4,5-trisphos 5e-20
cd08372241 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase 9e-06
>gnl|CDD|197308 cd09074, INPP5c, Catalytic domain of inositol polyphosphate 5-phosphatases Back     alignment and domain information 
 Score =  206 bits (526), Expect = 7e-65
 Identities = 103/298 (34%), Positives = 147/298 (49%), Gaps = 29/298 (9%)

Query: 33  ICVVTWNMNGQVSYEDLVE---LIGSNRKFDLLIVGLQEVP------------------R 71
           I VVTWN+ G +S  + +E           D+  VG+QEV                    
Sbjct: 3   IFVVTWNVGGGISPPENLENWLSPKGTEAPDIYAVGVQEVDMSVQGFVGNDDSAKAREWV 62

Query: 72  NNIARLLKRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRK 131
           +NI   L     E + L   A +  + LFVF  +   P +K+L+++  +VG  GG     
Sbjct: 63  DNIQEALNEK--ENYVLLGSAQLVGIFLFVFVKKEHLPQIKDLEVEGVTVGTGGGGKLGN 120

Query: 132 KGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSL-FSKNQNPYA--EPAQI 188
           KG VAIR      +  F++ HL+A    VE RN + R IL  L F +            +
Sbjct: 121 KGGVAIRFQINDTSFCFVNSHLAAGQEEVERRNQDYRDILSKLKFYRGDPAIDSIFDHDV 180

Query: 189 TVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPT 248
             W GDLNYRI   +    + I   DL  LL  KDQL ++ E+G++F+G+ E  +TF PT
Sbjct: 181 VFWFGDLNYRIDSTDDEVRKLISQGDLDDLL-EKDQLKKQKEKGKVFDGFQELPITFPPT 239

Query: 249 YKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKA 306
           YK++ G+ +YDTS K R+P+W DRIL+K            SY S+    +SDHKPV+A
Sbjct: 240 YKFDPGTDEYDTSDKKRIPAWCDRILYK--SKAGSEIQPLSYTSVPLYKTSDHKPVRA 295

Inositol polyphosphate 5-phosphatases (5-phosphatases) are signal-modifying enzymes, which hydrolyze the 5-phosphate from the inositol ring of specific 5-position phosphorylated phosphoinositides (PIs) and inositol phosphates (IPs), such as PI(4,5)P2, PI(3,4,5)P3, PI(3,5)P2, I(1,4,5)P3, and I(1,3,4,5)P4. These enzymes are Mg2+-dependent, and belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. In addition to this INPP5c domain, 5-phosphatases often contain additional domains and motifs, such as the SH2 domain, the Sac-1 domain, the proline-rich domain (PRD), CAAX, RhoGAP (RhoGTPase-activating protein), and SKICH [SKIP (skeletal muscle- and kidney-enriched inositol phosphatase) carboxyl homology] domains, that are important for protein-protein interactions and/or for the subcellular localization of these enzymes. 5-phosphatases incorporate into large signaling complexes, and regulate diverse cellular processes including postsynaptic vesicular trafficking, insulin signaling, cell growth and survival, and endocytosis. Loss or gain of function of 5-phosphatases is implicated in certain human diseases. This family also contains a functionally unrelated nitric oxide transport protein, Cimex lectularius (bedbug) nitrophorin, which catalyzes a heme-assisted S-nitrosation of a proximal thiolate; the heme however binds at a site distinct from the active site of the 5-phosphatases. Length = 299
>gnl|CDD|197328 cd09094, INPP5c_INPP5J-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins Back     alignment and domain information
>gnl|CDD|197327 cd09093, INPP5c_INPP5B, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins Back     alignment and domain information
>gnl|CDD|214525 smart00128, IPPc, Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>gnl|CDD|197324 cd09090, INPP5c_ScInp51p-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Saccharomyces cerevisiae Inp51p, Inp52p, and Inp53p, and related proteins Back     alignment and domain information
>gnl|CDD|197329 cd09095, INPP5c_INPP5E-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins Back     alignment and domain information
>gnl|CDD|227698 COG5411, COG5411, Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|197323 cd09089, INPP5c_Synj, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanins Back     alignment and domain information
>gnl|CDD|197333 cd09099, INPP5c_Synj2, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 2 Back     alignment and domain information
>gnl|CDD|197332 cd09098, INPP5c_Synj1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1 Back     alignment and domain information
>gnl|CDD|197325 cd09091, INPP5c_SHIP, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and -2, and related proteins Back     alignment and domain information
>gnl|CDD|197334 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins Back     alignment and domain information
>gnl|CDD|197335 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol 5-phosphatase-2 and related proteins Back     alignment and domain information
>gnl|CDD|215624 PLN03191, PLN03191, Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>gnl|CDD|197306 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 321
KOG0566 1080 consensus Inositol-1,4,5-triphosphate 5-phosphatas 100.0
smart00128310 IPPc Inositol polyphosphate phosphatase, catalytic 100.0
PLN03191621 Type I inositol-1,4,5-trisphosphate 5-phosphatase 100.0
COG5411 460 Phosphatidylinositol 5-phosphate phosphatase [Sign 100.0
PTZ00312356 inositol-1,4,5-triphosphate 5-phosphatase; Provisi 99.96
KOG0565145 consensus Inositol polyphosphate 5-phosphatase and 99.85
KOG1976391 consensus Inositol polyphosphate 5-phosphatase, ty 99.83
TIGR03395283 sphingomy sphingomyelin phosphodiesterase. Members 99.66
PRK11756268 exonuclease III; Provisional 99.61
PRK05421263 hypothetical protein; Provisional 99.55
PF03372249 Exo_endo_phos: Endonuclease/Exonuclease/phosphatas 99.4
TIGR00633255 xth exodeoxyribonuclease III (xth). This family is 99.34
COG3568259 ElsH Metal-dependent hydrolase [General function p 99.29
PTZ00297 1452 pantothenate kinase; Provisional 99.27
KOG2756349 consensus Predicted Mg2+-dependent phosphodiestera 99.27
TIGR00195254 exoDNase_III exodeoxyribonuclease III. The model b 99.27
PRK13911250 exodeoxyribonuclease III; Provisional 99.19
PLN03144606 Carbon catabolite repressor protein 4 homolog; Pro 99.1
KOG3873 422 consensus Sphingomyelinase family protein [Signal 99.06
smart00476276 DNaseIc deoxyribonuclease I. Deoxyribonuclease I c 99.01
PRK15251271 cytolethal distending toxin subunit CdtB; Provisio 99.0
COG0708261 XthA Exonuclease III [DNA replication, recombinati 98.87
KOG2338495 consensus Transcriptional effector CCR4-related pr 98.25
COG3021309 Uncharacterized protein conserved in bacteria [Fun 97.55
PF14529119 Exo_endo_phos_2: Endonuclease-reverse transcriptas 96.33
COG5239378 CCR4 mRNA deadenylase, exonuclease subunit and rel 92.91
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=1e-81  Score=631.85  Aligned_cols=293  Identities=34%  Similarity=0.584  Sum_probs=266.2

Q ss_pred             CccchhhHhhhhhcCCcccCceeEEEEEEecCCC--CCcccHHHHhc------cCCCCceEEEeecCccchh--------
Q 038755           10 TREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQ--VSYEDLVELIG------SNRKFDLLIVGLQEVPRNN--------   73 (321)
Q Consensus        10 ~~~~i~~~~~~~~~~~~~~~~l~v~v~TwNv~~~--~~~~~l~~~l~------~~~~~Di~viglQE~~~~~--------   73 (321)
                      .++.|.+.+.+++.+|+.+++++|+|+||||||.  .+..+|.+||-      ...++|||||||||++.++        
T Consensus       516 v~~yv~~~L~er~~eyt~~k~i~IfvgTfNvNG~s~~~k~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As  595 (1080)
T KOG0566|consen  516 VHEYVLKELRERRSEYTEPKDISIFVGTFNVNGRSAAFKDDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSAS  595 (1080)
T ss_pred             hhHHHHHHHHHhhhhhccccceEEEEEeeeccCccccchhhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccC
Confidence            5778999999999999999999999999999994  44568999974      1236999999999998754        


Q ss_pred             ------HHHHHHHHcC---CCcEEEEEeeeeeEEEEEEecCCCcccccceeeeeEeecCccccccccCceEEEEEEEcCe
Q 038755           74 ------IARLLKRAVA---ETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGI  144 (321)
Q Consensus        74 ------~~~~l~~~l~---~~y~~v~~~~l~gi~l~vf~~~~~~~~i~~~~~~~~~~gg~gg~~g~nKGaV~v~~~i~~~  144 (321)
                            |+..+++.++   ..|+++.+.+|+|++|++|+|.+.+++|++|..++++| ||||..| |||||+|||.+++|
T Consensus       596 ~tk~~~Wee~i~~~Ln~~~~kYvlL~s~QlvGv~L~iF~r~~~~p~Ik~V~~~tkKT-GfGG~tg-NKGAVAIrf~~~~T  673 (1080)
T KOG0566|consen  596 TTKRRFWEEKILKTLNRYKNKYVLLRSEQLVGVCLLLFIRPDHAPYIKDVAGDTKKT-GFGGATG-NKGAVAIRFVYHAT  673 (1080)
T ss_pred             hHHHHHHHHHHHHHhcCCCCceEEEehhhhheeeEEEEEcccccchhhhcccceeec-ccccccC-CCceEEEEEEeccc
Confidence                  4555666664   47999999999999999999999999999999998876 8999988 79999999999999


Q ss_pred             EEEEEeecCCCCCccHHHHHHHHHHHHHhc-cCCCCCCCCCCcceEEEeccccccccCCCchhhHHHHhhhhHHHhhhhh
Q 038755          145 TMVFISCHLSAHARNVEERNSECRHILHSL-FSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKD  223 (321)
Q Consensus       145 ~i~fin~HL~a~~~~~~~R~~~~~~I~~~l-f~~~~~~~~~~~d~vf~~GDlNyRi~~~~~~~~~~~i~~~~~~~l~~~D  223 (321)
                      +|||||+|||||+.++++||.||.+|.+++ |...  .-+.+||+|||||||||||++ ++++|++.+.++.++.|+++|
T Consensus       674 sfCFv~SHlAAG~snv~ERn~DY~tI~r~l~Fp~G--r~I~~HD~ifW~GDFNYRI~l-~nEEVr~~v~~~d~~kL~e~D  750 (1080)
T KOG0566|consen  674 SFCFVCSHLAAGQSNVEERNEDYKTIARKLRFPRG--RMIFSHDYIFWLGDFNYRIDL-SNEEVRRLVRNQDLDKLLEYD  750 (1080)
T ss_pred             cEEEEecccccccchHhhhhhhHHHHHHhccccCC--ccccCCceEEEecccceeecC-CHHHHHHHHHhccHHHHhhHH
Confidence            999999999999999999999999999997 6542  235789999999999999999 899999999999999999999


Q ss_pred             HHHHHhhhcccCCccccCCccCCCCccccCCCCCCCCCCCCCCcccccceeeecCCCccccceeeeeeeccCCCccCCcc
Q 038755          224 QLLQEAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKP  303 (321)
Q Consensus       224 QL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~s~~ydts~k~R~PsWcDRIL~~~~~~~~~~~~~~~Y~s~~~~~~SDHkP  303 (321)
                      ||++||.+|.+|.||.|++|+|+||||||.||++||||.|+|+|||||||||+...   +  .++.|.+.+ +.+|||||
T Consensus       751 QL~~q~~~G~vF~gF~E~~ltF~PTYKyD~gTd~YDTSeK~R~PAWTDRIL~r~e~---~--~~l~Y~~~e-l~~SDHRP  824 (1080)
T KOG0566|consen  751 QLTQQMNAGQVFPGFHEGQLTFPPTYKYDPGTDDYDTSEKCRTPAWTDRILWRGEK---L--ELLSYKRAE-LKTSDHRP  824 (1080)
T ss_pred             HHHHHHhcCcccccccccccccCCcccccCCCCccccchhccCccchhhheecccc---c--ccccccccc-ccccCCCc
Confidence            99999999999999999999999999999999999999999999999999998875   2  578999875 99999999


Q ss_pred             eEeEEEEEec
Q 038755          304 VKAHLCLTVN  313 (321)
Q Consensus       304 V~a~f~l~~~  313 (321)
                      |+|.|.+++.
T Consensus       825 V~A~~~a~i~  834 (1080)
T KOG0566|consen  825 VYAIFRAEIF  834 (1080)
T ss_pred             eEEEEEEEEE
Confidence            9999999774

>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional Back     alignment and domain information
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism] Back     alignment and domain information
>TIGR03395 sphingomy sphingomyelin phosphodiesterase Back     alignment and domain information
>PRK11756 exonuclease III; Provisional Back     alignment and domain information
>PRK05421 hypothetical protein; Provisional Back     alignment and domain information
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling [] Back     alignment and domain information
>TIGR00633 xth exodeoxyribonuclease III (xth) Back     alignment and domain information
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00195 exoDNase_III exodeoxyribonuclease III Back     alignment and domain information
>PRK13911 exodeoxyribonuclease III; Provisional Back     alignment and domain information
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms] Back     alignment and domain information
>smart00476 DNaseIc deoxyribonuclease I Back     alignment and domain information
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional Back     alignment and domain information
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription] Back     alignment and domain information
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B Back     alignment and domain information
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
3mtc_A313 Crystal Structure Of Inpp5b In Complex With Phospha 1e-27
3n9v_A313 Crystal Structure Of Inpp5b Length = 313 1e-27
1i9y_A347 Crystal Structure Of Inositol Polyphosphate 5-Phosp 5e-22
2xsw_A357 Crystal Structure Of Human Inpp5e Length = 357 6e-21
3nr8_B316 Crystal Structure Of Human Ship2 Length = 316 6e-16
1ntf_A282 Crystal Structure Of Cimex Nitrophorin Length = 282 1e-12
>pdb|3MTC|A Chain A, Crystal Structure Of Inpp5b In Complex With Phosphatidylinositol 4- Phosphate Length = 313 Back     alignment and structure 
Iteration: 1

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 34/294 (11%)
Query: 37  TWNMNGQVSYEDLVELIGSN--RKFDLLIVGLQEVPRNNIARLLKRAVAETHDLFAKAIM 94
           T+N+NGQ S ++ + L  SN  +  D+  VG QE+  +  A        E    + KA+ 
Sbjct: 14  TYNVNGQ-SPKECLRLWLSNGIQAPDVYCVGFQELDLSKEAFFFHDTPKEEE--WFKAVS 70
Query: 95  QSLQ-----------------LFVFGPRNSEPLVKELKLDKYSVXXXXXXXXXXXXAVAI 137
           + L                  L ++  +     + E++ +  +V             VAI
Sbjct: 71  EGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAE--TVGTGIMGRMGNKGGVAI 128
Query: 138 RINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQIT-----VWL 192
           R  +   ++  ++ HL+AH    E RN + + I   +     +P   P  I+     +WL
Sbjct: 129 RFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWL 188
Query: 193 GDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSLTFKPTYKYN 252
           GDLNYRI+ L+   V+ +I +   ++L + DQL  +     +F G+ EG LTF+PTYKY+
Sbjct: 189 GDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELTFQPTYKYD 248
Query: 253 IGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHXXXXXXXXXXXXHKPVKA 306
            GS D+DTS K R P+W DRIL+K  +  +++   H            HKPV +
Sbjct: 249 TGSDDWDTSEKCRAPAWCDRILWKGKNITQLSYQSH-----MALKTSDHKPVSS 297
>pdb|3N9V|A Chain A, Crystal Structure Of Inpp5b Length = 313 Back     alignment and structure
>pdb|1I9Y|A Chain A, Crystal Structure Of Inositol Polyphosphate 5-Phosphatase Domain (Ipp5c) Of Spsynaptojanin Length = 347 Back     alignment and structure
>pdb|2XSW|A Chain A, Crystal Structure Of Human Inpp5e Length = 357 Back     alignment and structure
>pdb|3NR8|B Chain B, Crystal Structure Of Human Ship2 Length = 316 Back     alignment and structure
>pdb|1NTF|A Chain A, Crystal Structure Of Cimex Nitrophorin Length = 282 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 5e-91
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 3e-84
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 4e-83
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 2e-79
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 1e-77
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
2ddr_A306 Sphingomyelin phosphodiesterase; DNAse I like fold 1e-06
3teb_A266 Endonuclease/exonuclease/phosphatase; PSI-biology, 6e-06
3i41_A317 Beta-hemolysin; beta toxin, sphingomyelinase, toxi 2e-05
3mpr_A298 Putative endonuclease/exonuclease/phosphatase FAM 8e-05
1zwx_A301 SMCL, sphingomyelinase-C; dnase1-like fold, beta-h 1e-04
3l1w_A257 Uncharacterized protein; APC29019.2, conserved pro 5e-04
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Length = 313 Back     alignment and structure
 Score =  273 bits (699), Expect = 5e-91
 Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 28/311 (9%)

Query: 25  FSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRK-FDLLIVGLQEVPRNNIARLL----- 78
           ++   +      T+N+NGQ   E L   + +  +  D+  VG QE+  +  A        
Sbjct: 2   YTYIQNFRFFAGTYNVNGQSPKECLRLWLSNGIQAPDVYCVGFQELDLSKEAFFFHDTPK 61

Query: 79  ----KRAVAETHD------LFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFI 128
                +AV+E               +  + L ++  +     + E++ +    G   G +
Sbjct: 62  EEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTG-IMGRM 120

Query: 129 GRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQI 188
           G  KG VAIR  +   ++  ++ HL+AH    E RN + + I   +     +P   P  I
Sbjct: 121 G-NKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTI 179

Query: 189 T-----VWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSL 243
           +     +WLGDLNYRI+ L+   V+ +I +   ++L + DQL  +     +F G+ EG L
Sbjct: 180 SNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGEL 239

Query: 244 TFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKP 303
           TF+PTYKY+ GS D+DTS K R P+W DRIL+K       N    SY+S   + +SDHKP
Sbjct: 240 TFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGK-----NITQLSYQSHMALKTSDHKP 294

Query: 304 VKAHLCLTVNK 314
           V +   + V  
Sbjct: 295 VSSVFDIGVRV 305
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Length = 357 Back     alignment and structure
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Length = 316 Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Length = 282 Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Length = 347 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Length = 306 Back     alignment and structure
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b} Length = 266 Back     alignment and structure
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Length = 317 Back     alignment and structure
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron} Length = 298 Back     alignment and structure
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Length = 301 Back     alignment and structure
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis} Length = 257 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 100.0
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 100.0
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 100.0
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 100.0
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 100.0
4gz1_A256 Tyrosyl-DNA phosphodiesterase 2; protein-DNA compl 99.79
4fva_A256 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 99.76
4f1h_A250 Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA com 99.75
3teb_A266 Endonuclease/exonuclease/phosphatase; PSI-biology, 99.73
4gew_A362 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 99.73
1zwx_A301 SMCL, sphingomyelinase-C; dnase1-like fold, beta-h 99.67
1ako_A268 Exonuclease III; AP-endonuclease, DNA repair; 1.70 99.66
3l1w_A257 Uncharacterized protein; APC29019.2, conserved pro 99.63
3g6s_A267 Putative endonuclease/exonuclease/phosphatase fami 99.62
3i41_A317 Beta-hemolysin; beta toxin, sphingomyelinase, toxi 99.6
2ddr_A306 Sphingomyelin phosphodiesterase; DNAse I like fold 99.58
3mpr_A298 Putative endonuclease/exonuclease/phosphatase FAM 99.57
2jc4_A256 Exodeoxyribonuclease III; hydrolase, repair phosph 99.53
1vyb_A238 ORF2 contains A reverse transcriptase domain; endo 99.46
3g91_A265 MTH0212, exodeoxyribonuclease; double-strand speci 99.44
2voa_A257 AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP 99.44
2jc5_A259 Exodeoxyribonuclease; hydrolase, repair phosphodie 99.41
2o3h_A285 DNA-(apurinic or apyrimidinic site) lyase; APE, en 99.37
2j63_A467 AP-endonuclease; base excision repair, lyase; 2.48 99.34
1wdu_A245 TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA 99.33
1hd7_A318 DNA-(apurinic or apyrimidinic site) lyase; DNA rep 99.33
2a40_B260 Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse 99.16
1sr4_B261 CDT B, cytolethal distending toxin protein B; bact 99.11
3ngq_A398 CCR4-NOT transcription complex subunit 6-like; alp 99.09
2ei9_A240 Non-LTR retrotransposon R1BMKS ORF2 protein; four 98.94
4b8c_D727 Glucose-repressible alcohol dehydrogenase transcr 98.91
2f1n_A262 CDT B, cytolethal distending toxin subunit B; E.co 98.76
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Back     alignment and structure
Probab=100.00  E-value=1.4e-85  Score=614.70  Aligned_cols=282  Identities=30%  Similarity=0.537  Sum_probs=256.2

Q ss_pred             CcccCceeEEEEEEecCCCCCcccHHHHhc-cCCCCceEEEeecCccch-------------hHHHHHHHHcC--CCcEE
Q 038755           25 FSRNSDLCICVVTWNMNGQVSYEDLVELIG-SNRKFDLLIVGLQEVPRN-------------NIARLLKRAVA--ETHDL   88 (321)
Q Consensus        25 ~~~~~~l~v~v~TwNv~~~~~~~~l~~~l~-~~~~~Di~viglQE~~~~-------------~~~~~l~~~l~--~~y~~   88 (321)
                      |+..++++|+|+||||||..|+++|.+||. ...+||||||||||+...             .|...+.++|+  ..|.+
T Consensus         2 yt~~~~~~i~v~TwNvng~~~~~~l~~wL~~~~~~pDI~viGlQE~~l~~~~~~~~~~~~~~~W~~~i~~~L~~~~~Y~~   81 (313)
T 3mtc_A            2 YTYIQNFRFFAGTYNVNGQSPKECLRLWLSNGIQAPDVYCVGFQELDLSKEAFFFHDTPKEEEWFKAVSEGLHPDAKYAK   81 (313)
T ss_dssp             CEEEEEEEEEEEEEECTTCCCCSCTHHHHSSSCCCCSEEEEEEECSCCSHHHHTTCCCHHHHHHHHHHHHHSCTTSCEEE
T ss_pred             CceeeccEEEEEEEEcCCccCchhHHHHhcccCCCCCeEEEEEEecccchhhhcccCcchHHHHHHHHHHhcCCCCCEEE
Confidence            778899999999999999999999999997 346899999999999642             36777888886  36999


Q ss_pred             EEEeeeeeEEEEEEecCCCcccccceeeeeEeecCccccccccCceEEEEEEEcCeEEEEEeecCCCCCccHHHHHHHHH
Q 038755           89 FAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECR  168 (321)
Q Consensus        89 v~~~~l~gi~l~vf~~~~~~~~i~~~~~~~~~~gg~gg~~g~nKGaV~v~~~i~~~~i~fin~HL~a~~~~~~~R~~~~~  168 (321)
                      +.+.+|+|+.|+||+|+++.++|++++++++++ |++|.+| |||||+++|.+++++||||||||+||++++++||+|+.
T Consensus        82 v~s~~lvGl~l~Vfvr~~~~~~i~~v~~~~v~t-G~~g~~G-NKGaV~ir~~~~~ts~cFVnsHLaA~~~~~~~Rn~d~~  159 (313)
T 3mtc_A           82 VKLIRLVGIMLLLYVKQEHAAYISEVEAETVGT-GIMGRMG-NKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYK  159 (313)
T ss_dssp             EEEEEETTEEEEEEEEGGGGGGEEEEEEEEEEC-SGGGTST-TSEEEEEEEEETTEEEEEEEEECCCSGGGHHHHHHHHH
T ss_pred             EEEechhhhhhhhhhhhhhhhhcceeEeeeecc-ccccccc-CCceEEEEEEECCcEEEEEeeccCCCchHHHHHHHHHH
Confidence            999999999999999999999999999999986 7888888 79999999999999999999999999999999999999


Q ss_pred             HHHHhc-cCCCCC---C-CCCCcceEEEeccccccccCCCchhhHHHHhhhhHHHhhhhhHHHHHhhhcccCCccccCCc
Q 038755          169 HILHSL-FSKNQN---P-YAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFNGYCEGSL  243 (321)
Q Consensus       169 ~I~~~l-f~~~~~---~-~~~~~d~vf~~GDlNyRi~~~~~~~~~~~i~~~~~~~l~~~DQL~~~~~~~~~f~~f~E~~I  243 (321)
                      +|++.+ |.....   + .+.+||++||+||||||++..+.++++++++++.++.|+++|||+++++++.+|.||.|++|
T Consensus       160 ~I~~~l~f~~~~~~~~~~~i~~~d~vfw~GDLNyRi~~~~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~g~~f~gf~E~~I  239 (313)
T 3mtc_A          160 DICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGEL  239 (313)
T ss_dssp             HHHHHCCBCCSCSSSCCBCTTSSSEEEEEEECCCCBCSSCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSCTTCBCCCC
T ss_pred             HHHHhcccCCCCCccCCccccCCceEEEeccccccccCCCHHHHHHHHhcCCHHHHHHhHHHHHHHHcCCccCCcccCCc
Confidence            999986 654321   1 24689999999999999985588899999999999999999999999999999999999999


Q ss_pred             cCCCCccccCCCCCCCCCCCCCCcccccceeeecCCCccccceeeeeeeccCCCccCCcceEeEEEEEec
Q 038755          244 TFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAHLCLTVN  313 (321)
Q Consensus       244 ~F~PTYK~~~~s~~ydts~k~R~PsWcDRIL~~~~~~~~~~~~~~~Y~s~~~~~~SDHkPV~a~f~l~~~  313 (321)
                      +|||||||++|+++||||+|+|+|||||||||++..     ++++.|.|++++.+||||||+|.|.+++.
T Consensus       240 ~F~PTYKyd~~s~~ydts~k~R~PsWcDRIL~~~~~-----i~~~~Y~s~~~~~~SDHrPV~a~f~~~~~  304 (313)
T 3mtc_A          240 TFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGKN-----ITQLSYQSHMALKTSDHKPVSSVFDIGVR  304 (313)
T ss_dssp             CSCCCBCBCTTSSSBCCSTTCCCCBCCEEEEEEESS-----EEEEEEEECTTCCSSSSCCEEEEEEEEEE
T ss_pred             CcCCCccCcCCCcccccccCEecccccceEEEecCC-----eEEEeeeeccCccCCCccCeEEEEEEEEE
Confidence            999999999999999999999999999999998753     47889999999999999999999999664
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Back     alignment and structure
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A* Back     alignment and structure
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans} Back     alignment and structure
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B* Back     alignment and structure
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b} Back     alignment and structure
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A Back     alignment and structure
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Back     alignment and structure
>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1 Back     alignment and structure
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis} Back     alignment and structure
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Back     alignment and structure
>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Back     alignment and structure
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis} Back     alignment and structure
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A Back     alignment and structure
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A Back     alignment and structure
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus} Back     alignment and structure
>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis} Back     alignment and structure
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A Back     alignment and structure
>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major} Back     alignment and structure
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1 Back     alignment and structure
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A Back     alignment and structure
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D* Back     alignment and structure
>1sr4_B CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: d.151.1.1 PDB: 2f2f_B Back     alignment and structure
>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A Back     alignment and structure
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori} Back     alignment and structure
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} Back     alignment and structure
>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 321
d1i9za_345 d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission 4e-61
d2imqx1280 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug ( 2e-38
d2ddra1299 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesteras 3e-06
d1zwxa1293 d.151.1.3 (A:41-333) Sphingomyelin phosphodiestera 4e-06
d1akoa_268 d.151.1.1 (A:) DNA-repair enzyme exonuclease III { 0.002
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 345 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  196 bits (498), Expect = 4e-61
 Identities = 90/318 (28%), Positives = 145/318 (45%), Gaps = 35/318 (11%)

Query: 20  ENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIGSNRK--FDLLIVGLQEVPRNNIARL 77
           +    FS + ++ I V ++N+NG  +   L   +        D+ +VG QE+ +    ++
Sbjct: 14  KRENEFSEHKNVKIFVASYNLNGCSATTKLENWLFPENTPLADIYVVGFQEIVQLTPQQV 73

Query: 78  L--------------------KRAVAETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLD 117
           +                    K      +       +    L +F   +  P +K ++  
Sbjct: 74  ISADPAKRREWESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGT 133

Query: 118 KYSVGGFGGFIGRKKGAVAIRINYKGITMVFISCHLSAHARNVEERNSECRHILHSL-FS 176
                   G +   KGAVAIR +Y+   + FI+ HL+A   N +ER+ + R I   L F 
Sbjct: 134 --VKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAGYTNYDERDHDYRTIASGLRFR 191

Query: 177 KNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQEAERGQIFN 236
           + ++ +       VW GD NYRI       V  I    L  L    DQL ++   G++F 
Sbjct: 192 RGRSIF--NHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLF-EYDQLNKQMLTGKVFP 248

Query: 237 GYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDI 296
            + E  +TF PTYK++IG+  YDTS K RVP+WTDRIL++ +         HSY+S+  +
Sbjct: 249 FFSELPITFPPTYKFDIGTDIYDTSDKHRVPAWTDRILYRGE------LVPHSYQSV-PL 301

Query: 297 YSSDHKPVKAHLCLTVNK 314
           Y SDH+P+ A     + K
Sbjct: 302 YYSDHRPIYATYEANIVK 319
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Length = 280 Back     information, alignment and structure
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]} Length = 299 Back     information, alignment and structure
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Length = 293 Back     information, alignment and structure
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]} Length = 268 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
d1i9za_345 Synaptojanin, IPP5C domain {Fission yeast (Schizos 100.0
d2imqx1280 Salivary nitrophorin {Bedbug (Cimex lectularius) [ 100.0
d2ddra1299 Sphingomyelin phosphodiesterase C {Bacillus cereus 99.71
d1zwxa1293 Sphingomyelin phosphodiesterase C {Listeria ivanov 99.67
d1wdua_228 Endonuclease domain of TRAS1 retrotransposon (ORF2 99.49
d1vyba_236 Endonuclease domain of LINE-1 reverse transcriptas 99.47
d1hd7a_275 DNA repair endonuclease Hap1 {Human (Homo sapiens) 99.14
d2f1na1250 Cytolethal distending toxin subunit B {Escherichia 99.06
d1akoa_268 DNA-repair enzyme exonuclease III {Escherichia col 99.05
d2a40b1260 Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913 99.03
d1sr4b_261 Cytolethal distending toxin subunit B {Haemophilus 99.01
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.6e-75  Score=554.67  Aligned_cols=296  Identities=31%  Similarity=0.491  Sum_probs=259.1

Q ss_pred             CccchhhHhhhhhcCCcccCceeEEEEEEecCCCCCcccHHHHhc--cCCCCceEEEeecCccchh--------------
Q 038755           10 TREGIQTVAVENHCNFSRNSDLCICVVTWNMNGQVSYEDLVELIG--SNRKFDLLIVGLQEVPRNN--------------   73 (321)
Q Consensus        10 ~~~~i~~~~~~~~~~~~~~~~l~v~v~TwNv~~~~~~~~l~~~l~--~~~~~Di~viglQE~~~~~--------------   73 (321)
                      .++++++.+.+++++|+..++|+|+|+||||||..|+++|.+||.  ....||||||||||+.+..              
T Consensus         4 ~~~~~~~~l~~r~~~~~~~~~l~I~v~TWNv~~~~~~~~l~~~l~~~~~~~~DI~viglQEi~~~~~~~~~~~~~~~~~~   83 (345)
T d1i9za_           4 IHEYVNHELRKRENEFSEHKNVKIFVASYNLNGCSATTKLENWLFPENTPLADIYVVGFQEIVQLTPQQVISADPAKRRE   83 (345)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEEEEEEEECTTCCCCSCCHHHHSCSSSCCCSEEEEEEECSSCCC-----CCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCceEEEEEEEcCCCccCCcchHHhhccCCCCCCCEEEEEcccCCccchhhhcccCchhhHH
Confidence            357899999999999999999999999999999999999999996  3456999999999985422              


Q ss_pred             HHHHHHHHc------CCCcEEEEEeeeeeEEEEEEecCCCcccccceeeeeEeecCccccccccCceEEEEEEEcCeEEE
Q 038755           74 IARLLKRAV------AETHDLFAKAIMQSLQLFVFGPRNSEPLVKELKLDKYSVGGFGGFIGRKKGAVAIRINYKGITMV  147 (321)
Q Consensus        74 ~~~~l~~~l------~~~y~~v~~~~l~gi~l~vf~~~~~~~~i~~~~~~~~~~gg~gg~~g~nKGaV~v~~~i~~~~i~  147 (321)
                      |...+..++      +..|..+.+.+|+|++|+||+|+++.+.++.+..+.+++ |++|.+| |||||+++|.+++++||
T Consensus        84 w~~~~~~~~~~~~~~~~~Y~~v~~~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~-g~~g~~g-nKGaV~vr~~i~~t~l~  161 (345)
T d1i9za_          84 WESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKT-GLGGVSG-NKGAVAIRFDYEDTGLC  161 (345)
T ss_dssp             HHHHHHHHHHHTCCSSCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEEC-CCC-----CCEEEEEEEEETTEEEE
T ss_pred             HHHHHHHhccccccCCCCeEEEEEecccCcEEEEEEcchhccccccceeEEEec-CcCCccc-CCceEEEEEEECCEEEE
Confidence            344444443      458999999999999999999999999999999888876 6778888 79999999999999999


Q ss_pred             EEeecCCCCCccHHHHHHHHHHHHHhccCCCCCCCCCCcceEEEeccccccccCCCchhhHHHHhhhhHHHhhhhhHHHH
Q 038755          148 FISCHLSAHARNVEERNSECRHILHSLFSKNQNPYAEPAQITVWLGDLNYRIQGLNTHPVRNIIHKDLQKLLTSKDQLLQ  227 (321)
Q Consensus       148 fin~HL~a~~~~~~~R~~~~~~I~~~lf~~~~~~~~~~~d~vf~~GDlNyRi~~~~~~~~~~~i~~~~~~~l~~~DQL~~  227 (321)
                      ||||||+||+++..+|++++..|++.+.... .....++|++||+||||||++. +.+.+.+++....+..|+++|||..
T Consensus       162 fvn~HL~ag~~~~~~R~~~~~~i~~~l~~~~-~~~~~~~d~v~~~GDlN~R~~~-~~~~~~~~i~~~~~~~l~~~dql~~  239 (345)
T d1i9za_         162 FITSHLAAGYTNYDERDHDYRTIASGLRFRR-GRSIFNHDYVVWFGDFNYRISL-TYEEVVPCIAQGKLSYLFEYDQLNK  239 (345)
T ss_dssp             EEEEECCCCSSCHHHHHHHHHHHHHHCCCGG-GCCTTSSSEEEEEEECCCCBSS-CHHHHHHHHHTTCHHHHHTTBHHHH
T ss_pred             EEEecccCcccchHHHHHHHHHHHHhhcccc-ccccccCceeEEeccccccccC-chhhhHhhhhccchhHHHHHHHHHh
Confidence            9999999999999999999999999873221 1234678999999999999998 7788899999988899999999999


Q ss_pred             HhhhcccCCccccCCccCCCCccccCCCCCCCCCCCCCCcccccceeeecCCCccccceeeeeeeccCCCccCCcceEeE
Q 038755          228 EAERGQIFNGYCEGSLTFKPTYKYNIGSSDYDTSYKVRVPSWTDRILFKIDDPDKINAALHSYESIDDIYSSDHKPVKAH  307 (321)
Q Consensus       228 ~~~~~~~f~~f~E~~I~F~PTYK~~~~s~~ydts~k~R~PsWcDRIL~~~~~~~~~~~~~~~Y~s~~~~~~SDHkPV~a~  307 (321)
                      ++..+.+|.+|.|++|+|+|||||+.+++.||++.|+|+|||||||||++.      +.++.|.|+ ++.+|||+||+|.
T Consensus       240 ~~~~~~~~~~~~E~~I~F~PTyk~~~~~~~yd~~~k~RiPsWcDRIL~~~~------~~~~~Y~s~-~~~~SDH~PV~a~  312 (345)
T d1i9za_         240 QMLTGKVFPFFSELPITFPPTYKFDIGTDIYDTSDKHRVPAWTDRILYRGE------LVPHSYQSV-PLYYSDHRPIYAT  312 (345)
T ss_dssp             HHHTTSSSTTCBCCCCCSCCCBCBCTTSSCBCCSTTCCCCBCCEEEEEESS------CEEEEEEEC-CCCSSSBCCEEEE
T ss_pred             hhhccCcccCcccCCCCCCCCCeEECCCCccCCCCCeeCccccceEEeeCc------eeeeeeecc-CCCCCCcccEEEE
Confidence            999999999999999999999999999999999999999999999999864      267899997 6789999999999


Q ss_pred             EEEEecCCC
Q 038755          308 LCLTVNKHS  316 (321)
Q Consensus       308 f~l~~~~~~  316 (321)
                      |++.++.-+
T Consensus       313 f~v~v~~~~  321 (345)
T d1i9za_         313 YEANIVKVD  321 (345)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEEEEEC
Confidence            999986543
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Back     information, alignment and structure
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Back     information, alignment and structure
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]} Back     information, alignment and structure
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]} Back     information, alignment and structure