Citrus Sinensis ID: 038856

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
CWKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK
Secondary Structure (PSIPRED)
cEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEHHHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcEEEEHHEEEcccccccHHHHHHHHHHHHHHHHHHEEEEccc
Coil and Loop (DISEMBL)
CWKIISFtvgepqttsnnpttlvplkTLVHTLPLALSYLLYMLITMEAVrginvpmyttLRRTTVAFTMIVEYLLTgqkhslpvvgsVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRigrssglssfglmwcngiictpiLLFWTSFrgdlevtmnfpllfypgFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWllfgglpfdlfNIVGQALGFLGSCFYAYCKLQGK
Flexible Loop (DISEMBL)
cwkiisftvgepqttsnnpttlvPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK
Low Complexity Region (SEG)
CWKIISFTVGEPQTTSNNPTTLVPLKTLVHTlplalsyllymlITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAfisrigrssglssfglMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNlkdlltiglgwllfgglpfdlfNIVGQALGFLGSCFYAYCKLQGK
Disordered region (IsUnstruct)
*WKIISFTVG*********TTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL***
Disordered Region (DISOPRED)
CWKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIG***GLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ**
Disordered Region (DISEMBL)
CWKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK
Disordered Region (DISPRO)
CWKIISFTVGE*Q**S**PTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQG*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
CWKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q18779	329	UDP-sugar transporter sqv	yes	no	0.879	0.686	0.355	1e-26
Q9NTN3	355	UDP-glucuronic acid/UDP-N	yes	no	0.875	0.633	0.331	4e-24
Q54YK1	382	Putative UDP-sugar transp	yes	no	0.894	0.602	0.275	7e-24
Q95YI5	373	UDP-sugar transporter UST	yes	no	0.910	0.627	0.330	7e-24
A2VE55	355	UDP-N-acetylglucosamine/U	yes	no	0.875	0.633	0.327	8e-24
Q15B89	343	UDP-N-acetylglucosamine/U	yes	no	0.875	0.655	0.327	1e-23
Q5RDC9	355	UDP-N-acetylglucosamine/U	yes	no	0.875	0.633	0.327	2e-23
Q76EJ3	337	UDP-N-acetylglucosamine/U	no	no	0.898	0.685	0.313	2e-19
Q762D5	326	UDP-N-acetylglucosamine/U	yes	no	0.871	0.687	0.305	2e-16
Q5M8T2	416	Solute carrier family 35	no	no	0.809	0.5	0.295	5e-12

>sp|Q18779|SQV7_CAEEL UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 117/228 (51%), Gaps = 2/228 (0%)

Query: 32  LPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGII 91
           +PL L Y   ++  +   + IN+PM+T LRR ++  TMI+E+ +   K S  V  SVG++
Sbjct: 80  MPLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEFYILNVKASKAVKISVGLM 139

Query: 92  LLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTP 151
           + G+F+A   DLSFDA GY ++FI NICTAA   +  +   +  L  +GLM+ N +    
Sbjct: 140 IGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDAKDLGKYGLMFYNCLFMLL 199

Query: 152 ILLFWTSFRGDLEVTMNFPL--LFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTI 209
             L    + GDL+   +F L            LLSCI  F++NY + L T  NSALT T 
Sbjct: 200 PALCVVQYTGDLDRAYSFMLSDSMTSSVWTCFLLSCICGFVLNYSLVLCTHHNSALTTTC 259

Query: 210 CGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK 257
            G +K+L    +G    G   F   N  G  +   GS  Y Y   + K
Sbjct: 260 VGPIKNLFVTYVGMFSSGDYVFQWANFTGINVSVFGSILYTYVTFRSK 307

Involved in the import of UDP-glucuronic acid (UDP-GlcA), UDP-N-acetylgalactosamine (UDP-GalNAc) and UDP-galactose (UDP-Gal) from the cytoplasm into the Golgi lumen for the biosynthesis of glycoconjugates that play a pivotal role in development.
Caenorhabditis elegans (taxid: 6239)

>sp|Q9NTN3|S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1

 Score =  111 bits (278), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 119/229 (51%), Gaps = 4/229 (1%)

Query: 23  VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSL 82
           VP KT     PL L Y    +  + + + +N+PM+T LRR ++ FTM  E +L  +  S 
Sbjct: 105 VPRKTF----PLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSW 160

Query: 83  PVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLM 142
            +  +V  +++GAF+A + DL+FD  GYA + I ++ TAA  A++ +   S  L  +GL+
Sbjct: 161 GIKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLL 220

Query: 143 WCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILN 202
           + N +      L    F GD +  + F       F +   LSC+M F++ Y   L T  N
Sbjct: 221 YYNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYN 280

Query: 203 SALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY 251
           SALT TI G +K++L   +G +  G   F   N +G  +   GS  Y+Y
Sbjct: 281 SALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329

Transports both UDP-glucuronic acid (UDP-GlcA) and UDP-N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to into the endoplasmic reticulum lumen. May participate in glucuronidation and/or chondroitin sulfate biosynthesis.

Homo sapiens (taxid: 9606)

>sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2

 Score =  110 bits (276), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 138/232 (59%), Gaps = 2/232 (0%)

Query: 26  KTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVV 85
           +T+   +PL+  Y++ +L+ +++++ +N+PMY+ L+R      +++EY +  +     ++
Sbjct: 153 ETIKKLMPLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPPKII 212

Query: 86  GSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCN 145
            SV ++++GA +AG  DLSF++ GY++V ++ I  A+YL ++ ++   S +S++ +++ N
Sbjct: 213 ASVVVMVIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKVA--SNMSTYDMLYYN 270

Query: 146 GIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSAL 205
            ++  PI +F      ++E    F  L+   FQ   +LS  + F +N+ +F  T +NS L
Sbjct: 271 SVLSLPITIFLMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPL 330

Query: 206 TQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK 257
           T ++ G +K++ +  +G ++F  +     NI+G  +  +GS +Y++ KL  K
Sbjct: 331 TTSVTGQVKNIASTIIGAMVFNDIIIHPINILGLIINIIGSIWYSFLKLTSK 382

May be nvolved in the import of UDP-sugars.

Dictyostelium discoideum (taxid: 44689)

>sp|Q95YI5|US74C_DROME UDP-sugar transporter UST74c OS=Drosophila melanogaster GN=frc PE=1 SV=2

 Score =  110 bits (276), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 2/236 (0%)

Query: 24  PLK--TLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHS 81
           PL+  T     PL L +L  M+  +   + +++PM+  LRR ++  TM++E  + G + S
Sbjct: 121 PLQRNTFAKIFPLPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPS 180

Query: 82  LPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGL 141
             V  SV  ++ GA LA + DLSF+  GY  V I N  TA+   ++ +   +S +  +GL
Sbjct: 181 NAVQVSVYAMIGGALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGL 240

Query: 142 MWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTIL 201
           M+ N +      L      G+L+  +NF       F V  LLSC+M F+++Y   L T  
Sbjct: 241 MYYNSLFMFLPALALNYVTGNLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQF 300

Query: 202 NSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK 257
           NSALT TI G LK++    LG  + G   F   N +G  +  L S  Y Y   + K
Sbjct: 301 NSALTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLYTYVTFRRK 356

Involved in the import of UDP-sugars from the cytoplasm into the Golgi lumen.

Drosophila melanogaster (taxid: 7227)

>sp|A2VE55|S35D2_BOVIN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Bos taurus GN=SLC35D2 PE=2 SV=1

 Score =  110 bits (276), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 119/229 (51%), Gaps = 4/229 (1%)

Query: 23  VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSL 82
           VP KT     PL L Y    +  + + + +N+PM+T LRR ++ FTM  E +L  +  S 
Sbjct: 105 VPRKTF----PLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSW 160

Query: 83  PVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLM 142
            +  +V  +++GAF+A + DL+FD  GY  + I ++ TAA  A++ +   S  L  +GL+
Sbjct: 161 GIKMTVFAMIIGAFVAASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLL 220

Query: 143 WCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILN 202
           + N +      L    F GD +  ++F       F +   LSC+M F++ Y   L T  N
Sbjct: 221 YYNALFMILPTLAIAYFTGDAQKALDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYN 280

Query: 203 SALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY 251
           SALT TI G +K++L   +G +  G   F   N +G  +   GS  Y+Y
Sbjct: 281 SALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-GlcNAc, the donor substrate, and thus be involved in growth factor signaling.

Bos taurus (taxid: 9913)

>sp|Q15B89|S35D2_PIG UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter (Fragment) OS=Sus scrofa GN=SLC35D2 PE=2 SV=1

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 4/229 (1%)

Query: 23  VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSL 82
           VP KT     PL L Y    +  + + + +N+PM+T LRR ++ FTM  E +L  +  S 
Sbjct: 93  VPRKTF----PLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSW 148

Query: 83  PVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLM 142
            +  +V  +++GAF+A + DL+FD  GY  + I ++ TAA  A++ +   S  L  +GL+
Sbjct: 149 GIKMTVFAMIIGAFVAASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLL 208

Query: 143 WCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILN 202
           + N +      L      GD +  M+F       F +   LSC+M F++ Y   L T  N
Sbjct: 209 YYNALFMILPTLAIAYITGDAQKAMDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYN 268

Query: 203 SALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY 251
           SALT TI G +K++L   +G +  G   F   N +G  +   GS  Y+Y
Sbjct: 269 SALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSY 317

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Sus scrofa (taxid: 9823)

>sp|Q5RDC9|S35D2_PONAB UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Pongo abelii GN=SLC35D2 PE=2 SV=1

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 4/229 (1%)

Query: 23  VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSL 82
           VP KT     PL L Y    +  + + + +N+PM+T LRR ++ FTM  E +L  +  S 
Sbjct: 105 VPRKTF----PLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSW 160

Query: 83  PVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLM 142
            +  +V  +++GAF+A + DL+FD  GY  + I ++ TAA  A++ +   S  L  +GL+
Sbjct: 161 GIKMTVFAMIIGAFVAASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLL 220

Query: 143 WCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILN 202
           + N +      L    F GD +  + F       F +   LSC+M F++ Y   L T  N
Sbjct: 221 YYNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYN 280

Query: 203 SALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY 251
           SALT TI G +K++L   +G +  G   F   N +G  +   GS  Y+Y
Sbjct: 281 SALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Pongo abelii (taxid: 9601)

>sp|Q76EJ3|S35D2_HUMAN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Homo sapiens GN=SLC35D2 PE=1 SV=1

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 122/233 (52%), Gaps = 2/233 (0%)

Query: 26  KTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVV 85
           K  V   PL L Y+   +  + +   +++PM+T LR+ T+  T+++E ++ G+++SL ++
Sbjct: 89  KIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNII 148

Query: 86  GSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCN 145
            SV  I+LGAF+A   DL+F+  GY  VF+ +I TAA   +  +      L  +G+++ N
Sbjct: 149 LSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN 208

Query: 146 G-IICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSA 204
              +  P L+   S  GDL+    F       F +  LLSC + FL+ Y   L +  NSA
Sbjct: 209 ACFMIIPTLIISVS-TGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSA 267

Query: 205 LTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK 257
           LT  + G +K++    +G L+ G   F L N VG  +   G   Y++  L  +
Sbjct: 268 LTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQ 320

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Homo sapiens (taxid: 9606)

>sp|Q762D5|S35D2_MOUSE UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Mus musculus GN=Slc35d2 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 2/226 (0%)

Query: 33  PLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIIL 92
           PL L Y+   +  + +   +++PM+T LR+ T+ FT+++E ++ G ++SL ++ SV  I+
Sbjct: 84  PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEAIILGTQYSLNIILSVLAIV 143

Query: 93  LGAFLAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNG-IICTP 151
           LGAF+A   DL+F+  GY  VF+ +I TAA   +  +      L  +G+++ N   +  P
Sbjct: 144 LGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACFMLIP 203

Query: 152 ILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICG 211
            ++   S  GD +    F       F +  LLSC++ FL+ Y   L +  NSALT  + G
Sbjct: 204 TVIISVS-TGDFQQATEFRHWKNVLFIIQFLLSCLLGFLLMYSTALCSYYNSALTTAVVG 262

Query: 212 NLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK 257
            +K++    +G L+ G   F L N +G  +   G   Y++  L  +
Sbjct: 263 AIKNVSVAYIGMLVGGDYIFSLLNFIGLNICMAGGLRYSFLTLSSQ 308

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Mus musculus (taxid: 10090)

>sp|Q5M8T2|S35D3_HUMAN Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 5/213 (2%)

Query: 44  ITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLP-VVGSVGIILLGAFLAGARD 102
           +T+ ++RG+++PMY   +R     TM++  L+       P V+ +V I   GA LAGA D
Sbjct: 91  LTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGD 150

Query: 103 LSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGD 162
           L+ D  GY    +A +  AAYL  I +    +        +   +  TP+L+  +    D
Sbjct: 151 LTGDPIGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTD 210

Query: 163 LEVTMNFPLLFYPGFQVVMLLSCIM-AFLINYYVFLNTILNSALTQTICGNLKDLLTIGL 221
                 FP    P   V + ++CI+    +N+     T +NSA+T +  G +K + TI +
Sbjct: 211 SIHAWTFPGWKDPAM-VCIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATITV 269

Query: 222 GWLLFGGL-PFDLFNIVGQALGFLGSCFYAYCK 253
           G + F  + P  LF I G  +  LGS  Y   K
Sbjct: 270 GMVAFSDVEPTSLF-IAGVVVNTLGSIIYCVAK 301

May play a role in hemostasis as a regulator of the biosynthesis of platelet-dense granules.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
224144161	337	predicted protein [Populus trichocarpa]	0.996	0.759	0.839	1e-123
225445587	340	PREDICTED: UDP-sugar transporter sqv-7 [	0.996	0.752	0.781	1e-117
449443055	346	PREDICTED: UDP-sugar transporter sqv-7-l	0.996	0.739	0.751	1e-106
449443047	347	PREDICTED: UDP-sugar transporter sqv-7-l	0.996	0.737	0.740	1e-106
449493639	308	PREDICTED: putative UDP-sugar transporte	0.996	0.831	0.740	1e-106
296082048	311	unnamed protein product [Vitis vinifera]	0.996	0.823	0.718	1e-104
225430308	340	PREDICTED: UDP-sugar transporter UST74c	0.996	0.752	0.718	1e-104
449437148	353	PREDICTED: UDP-N-acetylglucosamine/UDP-g	0.988	0.719	0.710	1e-102
224089268	354	predicted protein [Populus trichocarpa]	0.996	0.723	0.732	1e-102
356552517	345	PREDICTED: UDP-glucuronic acid/UDP-N-ace	1.0	0.744	0.680	1e-99

>gi|224144161|ref|XP_002325205.1| predicted protein [Populus trichocarpa] gi|222866639|gb|EEF03770.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/256 (83%), Positives = 231/256 (90%)

Query: 2   WKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLR 61
           WKIISFT  EPQ  SNNP  LV  KTL+H+LPLALSYLLYMLITME+VR INVPMYTTLR
Sbjct: 82  WKIISFTTSEPQNMSNNPARLVSFKTLLHSLPLALSYLLYMLITMESVRAINVPMYTTLR 141

Query: 62  RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTA 121
           RTTVAFTMIVEYLLTGQKHSL VVGSVGII+LGAF+AGARDLSFDAYGYAVVF+ANICTA
Sbjct: 142 RTTVAFTMIVEYLLTGQKHSLRVVGSVGIIILGAFVAGARDLSFDAYGYAVVFVANICTA 201

Query: 122 AYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVM 181
            YLA I+RIG+SSGL+SFGLMWCNGIIC PILLFWTS RGDLE   NFP LF PGFQVVM
Sbjct: 202 VYLASIARIGKSSGLNSFGLMWCNGIICGPILLFWTSIRGDLEAMRNFPFLFSPGFQVVM 261

Query: 182 LLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQAL 241
           LLSCIMAFLINY+VF+NT LNSALTQTICGNLKDL TIG GW+LFGGLPFDL N+VGQ+L
Sbjct: 262 LLSCIMAFLINYFVFMNTTLNSALTQTICGNLKDLFTIGFGWILFGGLPFDLMNVVGQSL 321

Query: 242 GFLGSCFYAYCKLQGK 257
           GF GSC YAYCKL+G+
Sbjct: 322 GFFGSCLYAYCKLKGQ 337

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445587|ref|XP_002282363.1| PREDICTED: UDP-sugar transporter sqv-7 [Vitis vinifera] gi|297738992|emb|CBI28237.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/256 (78%), Positives = 227/256 (88%)

Query: 2   WKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLR 61
           WKIISF+ G+P++ +++  T VP+KTLVHTLPLA SYLLYMLITME+VR +NVPMYTTLR
Sbjct: 85  WKIISFSAGQPESITDDSATHVPIKTLVHTLPLASSYLLYMLITMESVRALNVPMYTTLR 144

Query: 62  RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTA 121
           RTTVAFTM+VEY LTGQKHSL V+ SVGII+LGAF+AGARDLSFD+YGYA+VF+ANICTA
Sbjct: 145 RTTVAFTMVVEYFLTGQKHSLAVLSSVGIIILGAFIAGARDLSFDSYGYAIVFVANICTA 204

Query: 122 AYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVM 181
            YLA ISRIG+SSGLSSFGLMW NGIIC P LL WT+  GDLE  MNFP LF PGFQ +M
Sbjct: 205 VYLASISRIGKSSGLSSFGLMWSNGIICGPALLLWTAMNGDLEAMMNFPHLFSPGFQAMM 264

Query: 182 LLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQAL 241
           LLSCIMAF +NY+VFLNT LNSALTQTICGNLKDL TIGLGWL+FGGLPFDL N+ GQ++
Sbjct: 265 LLSCIMAFFLNYFVFLNTTLNSALTQTICGNLKDLFTIGLGWLIFGGLPFDLLNVAGQSI 324

Query: 242 GFLGSCFYAYCKLQGK 257
           GFLGSC YAYCKL+GK
Sbjct: 325 GFLGSCLYAYCKLRGK 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443055|ref|XP_004139296.1| PREDICTED: UDP-sugar transporter sqv-7-like [Cucumis sativus] gi|449493635|ref|XP_004159386.1| PREDICTED: UDP-sugar transporter sqv-7-like [Cucumis sativus]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/258 (75%), Positives = 222/258 (86%), Gaps = 2/258 (0%)

Query: 2   WKIISFTVGEPQTTSNNPTT--LVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTT 59
           WKIISFTVGE Q+ S++  +  LVP KTLV TLPLA+SYLLYML+TME+VRGINVPMYTT
Sbjct: 89  WKIISFTVGESQSISSSGKSIILVPYKTLVQTLPLAISYLLYMLVTMESVRGINVPMYTT 148

Query: 60  LRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANIC 119
           LRRTTV FTMI EYLLTGQ HSL VVGSVG+I+LGA +AGARDLSFD Y Y+VVFIANIC
Sbjct: 149 LRRTTVVFTMIAEYLLTGQTHSLFVVGSVGMIILGAVVAGARDLSFDTYSYSVVFIANIC 208

Query: 120 TAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQV 179
           TA YLA I+RIG+SSGL++FGLMWCNG+IC P+L FW   RGD+E T+NF  LF  GFQ 
Sbjct: 209 TAIYLASIARIGKSSGLNTFGLMWCNGLICGPLLFFWIILRGDVEATLNFRYLFSFGFQC 268

Query: 180 VMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQ 239
           VMLLSCIMAFLINY+VFLNT LNSALTQT+CGNLKD+ +I +GW LFGGLP+D  N+VGQ
Sbjct: 269 VMLLSCIMAFLINYFVFLNTTLNSALTQTVCGNLKDVFSIAIGWFLFGGLPYDFLNVVGQ 328

Query: 240 ALGFLGSCFYAYCKLQGK 257
           ++GFLGSC YAYCKL GK
Sbjct: 329 SIGFLGSCIYAYCKLHGK 346

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443047|ref|XP_004139292.1| PREDICTED: UDP-sugar transporter sqv-7-like [Cucumis sativus]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/258 (74%), Positives = 218/258 (84%), Gaps = 2/258 (0%)

Query: 2   WKIISFTV-GEPQTTS-NNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTT 59
           WKIISFTV GE Q+ S      LVP +TLV TLPLALSYL YM++TME+VRGINVPMYTT
Sbjct: 90  WKIISFTVTGESQSVSVGRSMILVPFRTLVKTLPLALSYLFYMVVTMESVRGINVPMYTT 149

Query: 60  LRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANIC 119
           LRRTTVAFTMI EYLLTGQ HS  VV SVG+I+LGA +AG+RDLSFD Y YAVVF+ANIC
Sbjct: 150 LRRTTVAFTMIAEYLLTGQTHSPFVVTSVGMIILGAVVAGSRDLSFDTYSYAVVFVANIC 209

Query: 120 TAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQV 179
           TA YLA I+RIG+SSGL++FGLMWCNG+IC P+LL W + RGD+E T+NF  LF  GFQ 
Sbjct: 210 TALYLASIARIGKSSGLNTFGLMWCNGVICGPLLLLWITIRGDVETTLNFRYLFSIGFQC 269

Query: 180 VMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQ 239
           VMLLSCIMAFLINY+VFLNT LNSALTQT+CGNLKD+ +IG+GW LFGGLP+D  NIVGQ
Sbjct: 270 VMLLSCIMAFLINYFVFLNTTLNSALTQTVCGNLKDVFSIGVGWFLFGGLPYDFINIVGQ 329

Query: 240 ALGFLGSCFYAYCKLQGK 257
           + GF+GSC YAYCKL GK
Sbjct: 330 SFGFMGSCLYAYCKLHGK 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493639|ref|XP_004159388.1| PREDICTED: putative UDP-sugar transporter DDB_G0278631-like [Cucumis sativus]

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/258 (74%), Positives = 218/258 (84%), Gaps = 2/258 (0%)

Query: 2   WKIISFTV-GEPQTTS-NNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTT 59
           WKIISFTV GE Q+ S      LVP +TLV TLPLALSYL YM++TME+VRGINVPMYTT
Sbjct: 51  WKIISFTVTGESQSVSVGRSMILVPFRTLVKTLPLALSYLFYMVVTMESVRGINVPMYTT 110

Query: 60  LRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANIC 119
           LRRTTVAFTMI EYLLTGQ HS  VV SVG+I+LGA +AG+RDLSFD Y YAVVF+ANIC
Sbjct: 111 LRRTTVAFTMIAEYLLTGQTHSPFVVTSVGMIILGAVVAGSRDLSFDTYSYAVVFVANIC 170

Query: 120 TAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQV 179
           TA YLA I+RIG+SSGL++FGLMWCNG+IC P+LL W + RGD+E T+NF  LF  GFQ 
Sbjct: 171 TALYLASIARIGKSSGLNTFGLMWCNGVICGPLLLLWITIRGDVETTLNFRYLFSIGFQC 230

Query: 180 VMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQ 239
           VMLLSCIMAFLINY+VFLNT LNSALTQT+CGNLKD+ +IG+GW LFGGLP+D  NIVGQ
Sbjct: 231 VMLLSCIMAFLINYFVFLNTTLNSALTQTVCGNLKDVFSIGVGWFLFGGLPYDFINIVGQ 290

Query: 240 ALGFLGSCFYAYCKLQGK 257
           + GF+GSC YAYCKL GK
Sbjct: 291 SFGFMGSCLYAYCKLHGK 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082048|emb|CBI21053.3| unnamed protein product [Vitis vinifera]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/256 (71%), Positives = 217/256 (84%)

Query: 2   WKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLR 61
           WKIISFT+GE    ++     VP+ TL+HTLPLA++YLLYML+TME+VRG+NVPMYTTLR
Sbjct: 56  WKIISFTLGESSNVNDGSPVFVPITTLIHTLPLAITYLLYMLVTMESVRGVNVPMYTTLR 115

Query: 62  RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTA 121
           RTTV FTM VEY+L GQ+++  VVGSVG+I+LGAF+AGARDLSFD+YGYAVVF++NI TA
Sbjct: 116 RTTVVFTMFVEYILAGQRYTSSVVGSVGLIVLGAFIAGARDLSFDSYGYAVVFLSNITTA 175

Query: 122 AYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVM 181
            YLA I+RIG+SSGL+SFGLMWCNGI+C PILL WT  RGDL + MNFP  F PGF VV+
Sbjct: 176 IYLATIARIGKSSGLNSFGLMWCNGILCGPILLLWTFIRGDLGMAMNFPHFFLPGFLVVL 235

Query: 182 LLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQAL 241
           LLSCI+AF +NY +FLNT LNSA+TQTICGNLKDL TIGLGW++FGGLPFD+ NI GQ L
Sbjct: 236 LLSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWMIFGGLPFDILNITGQFL 295

Query: 242 GFLGSCFYAYCKLQGK 257
           GFLGS  YAY KL GK
Sbjct: 296 GFLGSGLYAYYKLIGK 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430308|ref|XP_002285174.1| PREDICTED: UDP-sugar transporter UST74c [Vitis vinifera]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/256 (71%), Positives = 217/256 (84%)

Query: 2   WKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLR 61
           WKIISFT+GE    ++     VP+ TL+HTLPLA++YLLYML+TME+VRG+NVPMYTTLR
Sbjct: 85  WKIISFTLGESSNVNDGSPVFVPITTLIHTLPLAITYLLYMLVTMESVRGVNVPMYTTLR 144

Query: 62  RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTA 121
           RTTV FTM VEY+L GQ+++  VVGSVG+I+LGAF+AGARDLSFD+YGYAVVF++NI TA
Sbjct: 145 RTTVVFTMFVEYILAGQRYTSSVVGSVGLIVLGAFIAGARDLSFDSYGYAVVFLSNITTA 204

Query: 122 AYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVM 181
            YLA I+RIG+SSGL+SFGLMWCNGI+C PILL WT  RGDL + MNFP  F PGF VV+
Sbjct: 205 IYLATIARIGKSSGLNSFGLMWCNGILCGPILLLWTFIRGDLGMAMNFPHFFLPGFLVVL 264

Query: 182 LLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQAL 241
           LLSCI+AF +NY +FLNT LNSA+TQTICGNLKDL TIGLGW++FGGLPFD+ NI GQ L
Sbjct: 265 LLSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWMIFGGLPFDILNITGQFL 324

Query: 242 GFLGSCFYAYCKLQGK 257
           GFLGS  YAY KL GK
Sbjct: 325 GFLGSGLYAYYKLIGK 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437148|ref|XP_004136354.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus] gi|449520181|ref|XP_004167112.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/259 (71%), Positives = 220/259 (84%), Gaps = 5/259 (1%)

Query: 2   WKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLR 61
           WKIISFTVG+  + S+N T++VP+KTL  T PLA +YLLYML TME+VRG+NVPMYTTLR
Sbjct: 97  WKIISFTVGD--SFSDNATSMVPMKTLRQTSPLAGTYLLYMLATMESVRGVNVPMYTTLR 154

Query: 62  RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTA 121
           RTTV FTM+VEYLL GQK++  VVGSVG+I+LGAF+AGARDLSFD YGY++VF++NI TA
Sbjct: 155 RTTVVFTMVVEYLLAGQKYTYSVVGSVGLIVLGAFIAGARDLSFDVYGYSIVFMSNITTA 214

Query: 122 AYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGF---Q 178
            YLA ISRIG+SSGL+SFGLMWCNG++C P+LLFWT  RGDLE T++FP LF PGF   +
Sbjct: 215 IYLATISRIGKSSGLNSFGLMWCNGVLCAPVLLFWTFIRGDLEATISFPHLFSPGFLVSR 274

Query: 179 VVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVG 238
           VVM  SC +AF +NY +FLNT LNSA+TQTICGNLKDL TIGLGW++FGGLPFDL N++G
Sbjct: 275 VVMFCSCTLAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWMIFGGLPFDLLNVIG 334

Query: 239 QALGFLGSCFYAYCKLQGK 257
           Q LGF+GS  YAY KL GK
Sbjct: 335 QLLGFIGSGLYAYYKLIGK 353

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089268|ref|XP_002308668.1| predicted protein [Populus trichocarpa] gi|222854644|gb|EEE92191.1| predicted protein [Populus trichocarpa]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/258 (73%), Positives = 217/258 (84%), Gaps = 2/258 (0%)

Query: 2   WKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLR 61
           W+IISFT G   TTS+   T VPL+TL+HTLPLAL+YLLYML+TME+VRG+NVPMYTTLR
Sbjct: 97  WRIISFTDGGSLTTSDVNATFVPLETLMHTLPLALTYLLYMLVTMESVRGVNVPMYTTLR 156

Query: 62  RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICTA 121
           RTTV FTMI+EY+L GQ+++ P+ GSVG+I+LGAF+AGARDLSFD YGYAVVF AN  TA
Sbjct: 157 RTTVVFTMIMEYILAGQRYTRPIFGSVGLIVLGAFIAGARDLSFDFYGYAVVFAANFTTA 216

Query: 122 AYLAFISRIGR-SSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGF-QV 179
            YLA ISRIGR SSGL+SFGLMWCNGIIC P+LLFWT  RGDL +TMNFP LF  GF Q 
Sbjct: 217 IYLATISRIGRKSSGLNSFGLMWCNGIICGPVLLFWTFIRGDLGMTMNFPYLFSLGFLQA 276

Query: 180 VMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQ 239
           V+LLSCI+AF +NY +FLNT LNSALTQTICGNLKDL TI LGW +FGGLPFD FN++GQ
Sbjct: 277 VLLLSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIALGWTIFGGLPFDFFNVIGQ 336

Query: 240 ALGFLGSCFYAYCKLQGK 257
            LGF GS  YAY KL G+
Sbjct: 337 CLGFAGSGLYAYYKLIGR 354

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552517|ref|XP_003544613.1| PREDICTED: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like [Glycine max]

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 175/257 (68%), Positives = 214/257 (83%)

Query: 1   CWKIISFTVGEPQTTSNNPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTL 60
           CW++ISF+ GEP   S N +  V LKTL HTLPL+ +YL YML+TME+VRG+NVPMYTTL
Sbjct: 89  CWRMISFSTGEPLHISENSSKFVSLKTLKHTLPLSGAYLFYMLVTMESVRGVNVPMYTTL 148

Query: 61  RRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYAVVFIANICT 120
           RRTTV FTM+VE++L GQ+++  V+ SVG+I+ GAF+AGARDLSFD YGYAVVF++NI T
Sbjct: 149 RRTTVVFTMLVEFVLVGQRYTPSVIFSVGLIVFGAFVAGARDLSFDGYGYAVVFMSNIAT 208

Query: 121 AAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVV 180
           A YLA I+RIG++SGL+SFGLMWCNGIIC P+LL WT  RGDL  T+NFP LF PGF V+
Sbjct: 209 AIYLATIARIGKTSGLNSFGLMWCNGIICGPVLLIWTFVRGDLMTTINFPHLFSPGFIVI 268

Query: 181 MLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQA 240
           +L SC++AF +NY +FLNT LNSA+TQTICGNLKDL TIGLGW++FGGLPFD +N++GQ 
Sbjct: 269 LLFSCMLAFFLNYCIFLNTTLNSAVTQTICGNLKDLFTIGLGWMIFGGLPFDFWNLIGQF 328

Query: 241 LGFLGSCFYAYCKLQGK 257
           LGF GS  YAY KL GK
Sbjct: 329 LGFAGSGLYAYYKLIGK 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.813	0.547	0.267	7.8e-23
WB|WBGene00005025	329	sqv-7 [Caenorhabditis elegans	0.801	0.626	0.331	2.6e-22
ZFIN|ZDB-GENE-040426-1213	363	slc35d1b "solute carrier famil	0.766	0.542	0.325	3e-21
ZFIN|ZDB-GENE-040826-5	336	slc35d1a "solute carrier famil	0.758	0.580	0.312	3.1e-19
UNIPROTKB|J9NSF8	355	SLC35D1 "Uncharacterized prote	0.793	0.574	0.289	2.7e-18
UNIPROTKB|F1PQY1	349	SLC35D2 "Uncharacterized prote	0.793	0.584	0.291	3.2e-18
UNIPROTKB|F1NCG7	350	SLC35D1 "Uncharacterized prote	0.793	0.582	0.299	3.2e-18
UNIPROTKB|Q9NTN3	355	SLC35D1 "UDP-glucuronic acid/U	0.793	0.574	0.289	3.6e-18
UNIPROTKB|A2VE55	355	SLC35D2 "UDP-N-acetylglucosami	0.793	0.574	0.284	6e-18
UNIPROTKB|Q76EJ3	337	SLC35D2 "UDP-N-acetylglucosami	0.797	0.608	0.285	7.2e-18

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 57/213 (26%), Positives = 107/213 (50%)

Query:    46 MEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLP-VVGSVGIILLGAFLAGARDLS 104
             +++++ +N+PMY+ L+R      +++EY +  +K S P ++ SV ++++GA +AG  DLS
Sbjct:   173 LDSLKQLNIPMYSALKRLVAVVILVMEYFIL-KKVSPPKIIASVVVMVIGAVVAGITDLS 231

Query:   105 FDAYGYAVVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNGIICTPILLFWTSFRGDLE 164
             F++ GY++V ++ I  A+YL                 ++ N ++  PI +F      ++E
Sbjct:   232 FNSLGYSLVLLSCIFQASYLIYVKKVASNMSTYDM--LYYNSVLSLPITIFLMIVNQEIE 289

Query:   165 VTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXX 224
                 F  L+   FQ   +LS  + F +N+ +F  T +NS LT ++ G             
Sbjct:   290 YFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTGQVKNIASTIIGAM 349

Query:   225 XXXXXXXXXXNIVGQALGFLGSCFYAYCKLQGK 257
                       NI+G  +  +GS +Y++ KL  K
Sbjct:   350 VFNDIIIHPINILGLIINIIGSIWYSFLKLTSK 382

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

WB|WBGene00005025 sqv-7 [Caenorhabditis elegans (taxid:6239)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 69/208 (33%), Positives = 93/208 (44%)

Query:    52 INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYA 111
             IN+PM+T LRR ++  TMI+E+ +   K S  V  SVG+++ G+F+A   DLSFDA GY 
Sbjct:   100 INLPMFTVLRRFSILMTMILEFYILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYT 159

Query:   112 VVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNGIICTPILLFWTSFRGDLEVTMNFPL 171
             ++FI NICTAA                   M+ N +      L    + GDL+   +F L
Sbjct:   160 MIFINNICTAALGVYTKQKLDAKDLGKYGLMFYNCLFMLLPALCVVQYTGDLDRAYSFML 219

Query:   172 L--FYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXXXX 229
                         LLSCI  F++NY + L T  NSALT T  G                  
Sbjct:   220 SDSMTSSVWTCFLLSCICGFVLNYSLVLCTHHNSALTTTCVGPIKNLFVTYVGMFSSGDY 279

Query:   230 XXXXXNIVGQALGFLGSCFYAYCKLQGK 257
                  N  G  +   GS  Y Y   + K
Sbjct:   280 VFQWANFTGINVSVFGSILYTYVTFRSK 307

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040025 "vulval development" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

ZFIN|ZDB-GENE-040426-1213 slc35d1b "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1b" [Danio rerio (taxid:7955)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 66/203 (32%), Positives = 98/203 (48%)

Query:    52 INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYA 111
             +N+PM+T LRR ++ FTM+ E  L  QK S  +  +V  ++LGAF+A + DL+FD  GY 
Sbjct:   122 LNLPMFTVLRRFSILFTMLFEGYLLKQKFSWSIKATVFTMILGAFVAASSDLAFDLQGYV 181

Query:   112 VVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNG---IICTPILLFWTSFRGDLEVTMN 168
              + + NI TAA  A                ++ N    II T +L ++T   GD++ T+ 
Sbjct:   182 FITLNNILTAANGAYMKQKLDSKELGKYGLLYYNALLMIIPTVVLAYFT---GDVQKTLE 238

Query:   169 FPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXXX 228
               +     F +  +LSC+M F++ Y + L T  NSALT TI G                 
Sbjct:   239 CEVWADYFFVIQFVLSCVMGFILMYSIMLCTHYNSALTTTIVGCIKNILVTYIGMVFGGD 298

Query:   229 XXXXXXNIVGQALGFLGSCFYAY 251
                   N VG  +   GS  Y+Y
Sbjct:   299 YIFSWMNFVGLNISIAGSLVYSY 321

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040826-5 slc35d1a "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1a" [Danio rerio (taxid:7955)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 64/205 (31%), Positives = 95/205 (46%)

Query:    52 INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYA 111
             +N+PM+T LRR ++ FTM+ E  L  +K S PV  +V  ++LGAF+A + DL+FD  GY 
Sbjct:   111 LNLPMFTVLRRFSILFTMLAEGFLLKKKFSRPVQLTVFTMILGAFVAASADLAFDLQGYV 170

Query:   112 VVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNGI-ICTPILLFWTSFRGDLEVTMNFP 170
              + + ++ TAA  A                ++ N + +  P LL      GD++   ++ 
Sbjct:   171 FILMNDVLTAANGAFVKQKLDSKELGKYGLLYYNALFMILPTLLL-AHVTGDMDKAFDYD 229

Query:   171 ----LLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXX 226
                 +LF   F     LSCIM F++ Y   L T  NSALT TI G               
Sbjct:   230 GWSDVLFISQF----FLSCIMGFILMYSTVLCTQYNSALTTTIVGCLKNILVTYIGMVFG 285

Query:   227 XXXXXXXXNIVGQALGFLGSCFYAY 251
                     N +G  +   GS  Y+Y
Sbjct:   286 GDYIFSWTNFIGLNISIAGSLVYSY 310

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|J9NSF8 SLC35D1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 223 (83.6 bits), Expect = 2.7e-18, P = 2.7e-18
 Identities = 59/204 (28%), Positives = 91/204 (44%)

Query:    48 AVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDA 107
             + + +N+PM+T LRR ++ FTM  E +L  +  S  +  +V  +++GAF+A + DL+FD 
Sbjct:   126 STKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDL 185

Query:   108 YGYAVVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNGIICTPILLFWTSFRGDLEVTM 167
              GY  + I ++ TAA  A                ++ N +      L    F GD +  M
Sbjct:   186 EGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKAM 245

Query:   168 NFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXX 227
             +F       F +   LSC+M F++ Y   L T  NSALT TI G                
Sbjct:   246 DFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGG 305

Query:   228 XXXXXXXNIVGQALGFLGSCFYAY 251
                    N +G  +   GS  Y+Y
Sbjct:   306 DYIFTWTNFIGLNISIAGSLVYSY 329

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PQY1 SLC35D2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 222 (83.2 bits), Expect = 3.2e-18, P = 3.2e-18
 Identities = 60/206 (29%), Positives = 94/206 (45%)

Query:    52 INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYA 111
             +++PM+T LR+ T+  T+++E ++ G+++SL ++ SV  I+LGAF+A   DL+F   GY 
Sbjct:   126 LSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIIASVFTIILGAFIAAGSDLAFYLEGYI 185

Query:   112 VVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNG-IICTPILLFWTSFRGDLEVTMNFP 170
              VF+ +I TAA                   ++ N   +  P L+   S  GDL     F 
Sbjct:   186 FVFLNDIFTAANGVYTKQKMGPKELGKYGVLFYNACFMIIPTLIISVS-TGDLRQATEFN 244

Query:   171 LLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXXXXX 230
                   F +  LLSC + FL+ Y + L +  NSALT  + G                   
Sbjct:   245 EWKNVLFIIQFLLSCFLGFLLMYSMVLCSYYNSALTTAVVGAIKNVSIAYIGMLVGGDYI 304

Query:   231 XXXXNIVGQALGFLGSCFYAYCKLQG 256
                 N VG  +   G   Y++  L G
Sbjct:   305 FSVLNFVGLNICMAGGLRYSFLTLSG 330

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NCG7 SLC35D1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 222 (83.2 bits), Expect = 3.2e-18, P = 3.2e-18
 Identities = 61/204 (29%), Positives = 90/204 (44%)

Query:    48 AVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDA 107
             + + +N+PM+T LRR ++ FTM  E +L  +K S  V  +V  +++GAF+A + DL+FD 
Sbjct:   121 STKKLNLPMFTVLRRFSILFTMFAEGVLLKKKFSWSVQMTVFAMIIGAFVAASADLAFDL 180

Query:   108 YGYAVVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNGIICTPILLFWTSFRGDLEVTM 167
              GY  + I +  TAA  A                ++ N +      L    F GD +  M
Sbjct:   181 EGYIFILINDALTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLTIAYFTGDAQKAM 240

Query:   168 NFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXX 227
              +       F V   LSC+M F++ Y   L T  NSALT TI G                
Sbjct:   241 EYQGWADMLFIVQFTLSCVMGFILMYSTVLCTQYNSALTTTIVGCIKNILITYIGMFFGG 300

Query:   228 XXXXXXXNIVGQALGFLGSCFYAY 251
                    N +G  +   GS  Y+Y
Sbjct:   301 DYIFTWMNFIGLNISIAGSLVYSY 324

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0015165 "pyrimidine nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

UNIPROTKB|Q9NTN3 SLC35D1 "UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter" [Homo sapiens (taxid:9606)]

 Score = 222 (83.2 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 59/204 (28%), Positives = 91/204 (44%)

Query:    48 AVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDA 107
             + + +N+PM+T LRR ++ FTM  E +L  +  S  +  +V  +++GAF+A + DL+FD 
Sbjct:   126 STKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDL 185

Query:   108 YGYAVVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNGIICTPILLFWTSFRGDLEVTM 167
              GYA + I ++ TAA  A                ++ N +      L    F GD +  +
Sbjct:   186 EGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKAV 245

Query:   168 NFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXX 227
              F       F +   LSC+M F++ Y   L T  NSALT TI G                
Sbjct:   246 EFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGG 305

Query:   228 XXXXXXXNIVGQALGFLGSCFYAY 251
                    N +G  +   GS  Y+Y
Sbjct:   306 DYIFTWTNFIGLNISIAGSLVYSY 329

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0005463 "UDP-N-acetylgalactosamine transmembrane transporter activity" evidence=NAS

GO:0015789 "UDP-N-acetylgalactosamine transport" evidence=NAS

GO:0005461 "UDP-glucuronic acid transmembrane transporter activity" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006065 "UDP-glucuronate biosynthetic process" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0015787 "UDP-glucuronic acid transport" evidence=TAS

UNIPROTKB|A2VE55 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Bos taurus (taxid:9913)]

 Score = 220 (82.5 bits), Expect = 6.0e-18, P = 6.0e-18
 Identities = 58/204 (28%), Positives = 91/204 (44%)

Query:    48 AVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDA 107
             + + +N+PM+T LRR ++ FTM  E +L  +  S  +  +V  +++GAF+A + DL+FD 
Sbjct:   126 STKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDL 185

Query:   108 YGYAVVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNGIICTPILLFWTSFRGDLEVTM 167
              GY  + I ++ TAA  A                ++ N +      L    F GD +  +
Sbjct:   186 EGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKAL 245

Query:   168 NFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXX 227
             +F       F +   LSC+M F++ Y   L T  NSALT TI G                
Sbjct:   246 DFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGG 305

Query:   228 XXXXXXXNIVGQALGFLGSCFYAY 251
                    N +G  +   GS  Y+Y
Sbjct:   306 DYIFTWTNFIGLNISIAGSLVYSY 329

GO:0000139 "Golgi membrane" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IEA

GO:0015165 "pyrimidine nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

UNIPROTKB|Q76EJ3 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Homo sapiens (taxid:9606)]

 Score = 218 (81.8 bits), Expect = 7.2e-18, P = 7.2e-18
 Identities = 59/207 (28%), Positives = 95/207 (45%)

Query:    52 INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAYGYA 111
             +++PM+T LR+ T+  T+++E ++ G+++SL ++ SV  I+LGAF+A   DL+F+  GY 
Sbjct:   115 LSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYI 174

Query:   112 VVFIANICTAAYLAXXXXXXXXXXXXXXXXMWCNG-IICTPILLFWTSFRGDLEVTMNFP 170
              VF+ +I TAA                   ++ N   +  P L+   S  GDL+    F 
Sbjct:   175 FVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVS-TGDLQQATEFN 233

Query:   171 LLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNXXXXXXXXXXXXXXXXXX 230
                   F +  LLSC + FL+ Y   L +  NSALT  + G                   
Sbjct:   234 QWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYI 293

Query:   231 XXXXNIVGQALGFLGSCFYAYCKLQGK 257
                 N VG  +   G   Y++  L  +
Sbjct:   294 FSLLNFVGLNICMAGGLRYSFLTLSSQ 320

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=NAS

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000139 "Golgi membrane" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	257
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	1e-08
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	4e-07
pfam08449	303	pfam08449, UAA, UAA transporter family	3e-05

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 8/150 (5%)

Query: 109 GYAVVFIANICTAAYLAFISRI---GRSSGLSSFGLMWCNG----IICTPILLFWTSFRG 161
           G+ +   A+   A  L    ++    + + L+   L++       I+  P LLF   F+ 
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 162 DLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGL 221
              +   F  L    + +++LLS ++AFL N   F      S LT ++ G +K ++ I L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 222 GWLLFGGLPFDLFNIVGQALGFLGSCFYAY 251
             ++FG  P    NI+G A+  LG   Y+Y
Sbjct: 121 SVIIFGD-PVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 49.9 bits (119), Expect = 4e-07
 Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 11/231 (4%)

Query: 36  LSYLLYMLI--TMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILL 93
           +S+LL ++I  + ++++ + VP+YT  +  T+      E L  G + +   + S  +++L
Sbjct: 74  ISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVL 133

Query: 94  GAFLAGARDLSFDAY-------GYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNG 146
            + +A   D    A+       GY  +F   + +AA++  + +  + +    F  M+ N 
Sbjct: 134 SSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNN 193

Query: 147 IICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALT 206
           ++  PILL ++    D     N          + M +S + +  I+Y       + S+ T
Sbjct: 194 LLSLPILLSFSFLFEDWS-PGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTT 252

Query: 207 QTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK 257
            ++ G L  L  I L  L+F   P +  +I    LGFL    YA  K + +
Sbjct: 253 YSMVGALNKLP-IALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302

Length = 309

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 15/242 (6%)

Query: 23  VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSL 82
           +PLKT V    +  ++ L  ++  EA++ I+ P +   +   +   MI+  L+ G+++S 
Sbjct: 62  IPLKTYVL---IVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSS 118

Query: 83  PVVGSVGIILLGAF---LAGARDLS-------FDAYGYAVVFIANICTAAYLAFISRIGR 132
               S  +I LG     LA A+D          D  G A++F A +  A       ++ +
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 133 SSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLF-YPGFQVVMLLSCIMAFLI 191
             G  S  +M+ + ++  P  L          +         +P     +LL+ +  ++ 
Sbjct: 179 KYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVG 238

Query: 192 NYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY 251
            ++VF       ALT T+   L+  +++ L  LLFG  P  L   +G  L FLG   YAY
Sbjct: 239 QFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGN-PLTLQQWLGTLLVFLGIFLYAY 297

Query: 252 CK 253
            K
Sbjct: 298 LK 299

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.98
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.97
PLN00411	358	nodulin MtN21 family protein; Provisional	99.95
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.95
PRK11272	292	putative DMT superfamily transporter inner membran	99.94
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.94
PRK11689	295	aromatic amino acid exporter; Provisional	99.94
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.92
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.92
PRK15430	296	putative chloramphenical resistance permease RarD;	99.92
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.89
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.87
KOG1580	337	consensus UDP-galactose transporter related protei	99.86
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.86
KOG1581	327	consensus UDP-galactose transporter related protei	99.84
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.8
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.8
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.79
KOG1582	367	consensus UDP-galactose transporter related protei	99.79
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.77
KOG2765	416	consensus Predicted membrane protein [Function unk	99.76
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.75
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.74
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.74
COG2962	293	RarD Predicted permeases [General function predict	99.73
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.71
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.62
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.47
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.3
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.29
KOG2766	336	consensus Predicted membrane protein [Function unk	99.27
COG2510	140	Predicted membrane protein [Function unknown]	99.27
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.07
PRK15430	296	putative chloramphenical resistance permease RarD;	99.04
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.02
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.01
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.93
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.74
PLN00411	358	nodulin MtN21 family protein; Provisional	98.69
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.68
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.57
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.55
COG2510	140	Predicted membrane protein [Function unknown]	98.48
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.44
PRK11272	292	putative DMT superfamily transporter inner membran	98.41
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.34
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.32
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.32
COG2962	293	RarD Predicted permeases [General function predict	98.29
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.27
PRK11689	295	aromatic amino acid exporter; Provisional	98.26
PRK13499	345	rhamnose-proton symporter; Provisional	98.09
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.99
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.97
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.95
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.95
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.88
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.87
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.85
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.76
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.76
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.75
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.68
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.63
PRK11431	105	multidrug efflux system protein; Provisional	97.63
COG2076	106	EmrE Membrane transporters of cations and cationic	97.62
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.49
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.49
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.3
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.2
COG2076	106	EmrE Membrane transporters of cations and cationic	97.16
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.11
PRK13499	345	rhamnose-proton symporter; Provisional	97.05
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.97
PRK11431	105	multidrug efflux system protein; Provisional	96.91
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.86
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.82
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.69
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.38
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.11
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.03
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.01
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.95
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.73
KOG2765	416	consensus Predicted membrane protein [Function unk	93.77
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.02
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.98
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	90.65
KOG1580	337	consensus UDP-galactose transporter related protei	90.18
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	89.96
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	89.47
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	88.71
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	88.49
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	87.45
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	87.31
KOG1581	327	consensus UDP-galactose transporter related protei	84.17
PF00909	399	Ammonium_transp: Ammonium Transporter Family; Inte	83.75
KOG2922	335	consensus Uncharacterized conserved protein [Funct	82.05

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.1e-32  Score=237.46  Aligned_cols=237  Identities=18%  Similarity=0.189  Sum_probs=196.8

Q ss_pred             CCCcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhc
Q 038856           20 TTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAG   99 (257)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~   99 (257)
                      +++.++++++.+++.|++++.++.+.|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+..
T Consensus        57 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        57 RLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            34577899999999999999999999999999999999999999999999999999999999999999999999998877


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhh-cCCC---CCch
Q 038856          100 ARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTM-NFPL---LFYP  175 (257)
Q Consensus       100 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~~~~---~~~~  175 (257)
                      ..|.+.+..|+.+++++++++|.|+++.||..++.+.|+.+++.|+.+.+.+.+.|.....++..... +...   ..+.
T Consensus       137 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~  216 (302)
T TIGR00817       137 DTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNV  216 (302)
T ss_pred             CCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCc
Confidence            66777788899999999999999999999987755678999999999999998888876555422111 1100   0111


Q ss_pred             -hHHHHHHHHHH-HHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          176 -GFQVVMLLSCI-MAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       176 -~~~~~l~~~~~-~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                       ..+...+..+. .....+...+.+++++||+++++.++++|+.++++|++++|| ++|+.|++|..++++|+++|++.|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge-~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       217 TKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGT-KISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCC-CCchhHHHHHHHHHHHHHHHHHHh
Confidence             12222333333 222233344679999999999999999999999999999996 999999999999999999999998


Q ss_pred             hcCC
Q 038856          254 LQGK  257 (257)
Q Consensus       254 ~~~~  257 (257)
                      +||+
T Consensus       296 ~~~~  299 (302)
T TIGR00817       296 AQKP  299 (302)
T ss_pred             ccCc
Confidence            7764

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.98  E-value=3.9e-30  Score=225.38  Aligned_cols=228  Identities=18%  Similarity=0.201  Sum_probs=192.8

Q ss_pred             hhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccccc
Q 038856           25 LKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLS  104 (257)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~  104 (257)
                      ++++++.++.|++........+.|+++++++++++++++.|+++++++++++|||++++++++++++++|+.+...+|.+
T Consensus       111 ~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~  190 (350)
T PTZ00343        111 KLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELH  190 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccch
Confidence            45789999999998777777889999999999999999999999999999999999999999999999999998888888


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhcccCC-----CChhhHHHHHHHHHHHHHHHHHHhcCchh--hhh-cC----CCC
Q 038856          105 FDAYGYAVVFIANICTAAYLAFISRIGRSSG-----LSSFGLMWCNGIICTPILLFWTSFRGDLE--VTM-NF----PLL  172 (257)
Q Consensus       105 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~--~~~-~~----~~~  172 (257)
                      +++.|++++++|++++|.++++.||..++.+     .++.+...++.+.+.++++|.....|+..  ... +.    ...
T Consensus       191 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~  270 (350)
T PTZ00343        191 FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNY  270 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhccccc
Confidence            8989999999999999999999999886542     56766777778899999988876443321  111 10    111


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhh
Q 038856          173 FYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYC  252 (257)
Q Consensus       173 ~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~  252 (257)
                      .....+..++.+++..+..+.+.+.++++++|.++++.+++||++++++|++++|| ++|+.+++|.++++.|+++|++.
T Consensus       271 ~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge-~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        271 TKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQT-QVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCC-CCchHhHHHHHHHHHHHHHHhhc
Confidence            11122334566677777777777889999999999999999999999999999996 99999999999999999999987


Q ss_pred             h
Q 038856          253 K  253 (257)
Q Consensus       253 k  253 (257)
                      |
T Consensus       350 k  350 (350)
T PTZ00343        350 K  350 (350)
T ss_pred             C
Confidence            5

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=2.7e-30  Score=214.99  Aligned_cols=238  Identities=34%  Similarity=0.578  Sum_probs=216.3

Q ss_pred             CCCCcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhh
Q 038856           19 PTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLA   98 (257)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~   98 (257)
                      +.+++++++.|+++|.++++.++.+++..+++|+|++.++++|+.+|+++++.+.+++|+|+++..+.++..+.+|....
T Consensus        68 ~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~  147 (314)
T KOG1444|consen   68 NFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAA  147 (314)
T ss_pred             ecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhh
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhh-hhcCCCCCchhH
Q 038856           99 GARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEV-TMNFPLLFYPGF  177 (257)
Q Consensus        99 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~  177 (257)
                      ..+|.++|..|+.|++.+.++.+.+.+..||..+..+.+.+.+++|+++++.+.+.......||++. ..+++.+.++.+
T Consensus       148 ~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~  227 (314)
T KOG1444|consen  148 AFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSV  227 (314)
T ss_pred             ccccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhH
Confidence            9999999988999999999999999999999988778899999999999999999999988999772 134444566778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhcCC
Q 038856          178 QVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK  257 (257)
Q Consensus       178 ~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~~~  257 (257)
                      +..+.++|++++.++|+.+++.+..|+++.+++| ++-.....++.+.++|+++++..++|..+.+.|.++|++.+.|+|
T Consensus       228 ~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  228 LVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK  306 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence            9999999999999999999999999999999999 555555556666666679999999999999999999999986553

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=8.8e-29  Score=213.23  Aligned_cols=232  Identities=23%  Similarity=0.344  Sum_probs=206.3

Q ss_pred             ChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc
Q 038856           24 PLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL  103 (257)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~  103 (257)
                      +++.++++++.++++..+..++|.|++|+|.++.+++|++.|+++++++.+++|||++++++.++++.++|+++....|.
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~  139 (303)
T PF08449_consen   60 RKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDS  139 (303)
T ss_pred             CcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccc
Confidence            44556888999999999999999999999999999999999999999999999999999999999999999999865543


Q ss_pred             c----c------chhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHh--cCchhhhhcCCC
Q 038856          104 S----F------DAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSF--RGDLEVTMNFPL  171 (257)
Q Consensus       104 ~----~------~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~--~~~~~~~~~~~~  171 (257)
                      +    .      +..|+++.+++.++.|++.+++||..++++.+++++++|.++++.+.+.+....  .+|..+..++..
T Consensus       140 ~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~  219 (303)
T PF08449_consen  140 SSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS  219 (303)
T ss_pred             ccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH
Confidence            1    1      123999999999999999999999999999999999999999999999888877  677665544443


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          172 LFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       172 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                       .++..+..++..++.+...+...+..+++.||++.++...++++.++++++++||+ ++++.||.|.++++.|..+|++
T Consensus       220 -~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~-~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  220 -AHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGH-PLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             -HhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCC-cCChHHHHHHHHhHHHHHHHHH
Confidence             34556777788888888878888889999999999999999999999999999995 9999999999999999999999


Q ss_pred             hhhcCC
Q 038856          252 CKLQGK  257 (257)
Q Consensus       252 ~k~~~~  257 (257)
                      .|+|+|
T Consensus       298 ~~~k~~  303 (303)
T PF08449_consen  298 AKKKKN  303 (303)
T ss_pred             hhccCC
Confidence            999986

; GO: 0055085 transmembrane transport

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=3e-30  Score=219.03  Aligned_cols=230  Identities=27%  Similarity=0.453  Sum_probs=204.1

Q ss_pred             hHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccccc
Q 038856           26 KTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSF  105 (257)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~~  105 (257)
                      ..++..+|+|+.++.+..+.|.|++++|++++|++|.++|+++.++++++.+|++++..+++++....|+.+....|.++
T Consensus        81 ~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~f  160 (316)
T KOG1441|consen   81 LPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSF  160 (316)
T ss_pred             cchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccc
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc--ccCCCChhhHHHHHHHHHHHHHH-HHHHhcCchhhhhcCCCCCchhHHHHHH
Q 038856          106 DAYGYAVVFIANICTAAYLAFISRIG--RSSGLSSFGLMWCNGIICTPILL-FWTSFRGDLEVTMNFPLLFYPGFQVVML  182 (257)
Q Consensus       106 ~~~G~~~~l~a~~~~a~~~v~~~~~~--~~~~~~~~~~~~~~~l~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~  182 (257)
                      |+.|...++++.+..+.++++.|+++  ++.+.|+.++++|+++.+..+++ |+....+...........++..++..+.
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            99999999999999999999999988  56789999999999999999999 8765433211100011123444455555


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhcCC
Q 038856          183 LSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK  257 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~~~  257 (257)
                      .+ ++++..|.+.+.+++++||+++++.+++|.+..++.|+++|+| +.|+.|.+|+++.+.|+++|++.|.+++
T Consensus       241 ~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~-pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  241 NS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGN-PVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecC-CCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            55 9999999999999999999999999999999999999999997 9999999999999999999999998754

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.95  E-value=7.7e-26  Score=197.95  Aligned_cols=230  Identities=15%  Similarity=0.148  Sum_probs=177.5

Q ss_pred             CcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHH------hCcccCcchhHHHHHHHhhh
Q 038856           22 LVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLL------TGQKHSLPVVGSVGIILLGA   95 (257)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~------~~e~~~~~~~~~~~~~~~Gv   95 (257)
                      +.+++++.+....|++....+.+.+.+++|++++++.++.++.|++++++++++      +|||++++++.+++++++|+
T Consensus        72 ~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv  151 (358)
T PLN00411         72 PLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGA  151 (358)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHH
Confidence            345777788888887775667788999999999999999999999999999999      69999999999999999999


Q ss_pred             hhhccc-cc-----------------------ccc-hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHH
Q 038856           96 FLAGAR-DL-----------------------SFD-AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICT  150 (257)
Q Consensus        96 ~~~~~~-~~-----------------------~~~-~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~  150 (257)
                      .++..+ +.                       ..+ ..|+.+++.++++||.|++.+|+..++++ +.....+++..++.
T Consensus       152 ~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~  230 (358)
T PLN00411        152 LVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVS  230 (358)
T ss_pred             HHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHH
Confidence            886531 11                       112 34999999999999999999999877542 23455666666555


Q ss_pred             HHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCc
Q 038856          151 PILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGL  229 (257)
Q Consensus       151 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~  229 (257)
                      ..+.+.....++.+. ......++.. ...+++.++.. ..+|.. ++++++.+|.+++++.+++|++++++|++++|| 
T Consensus       231 ~~~~~~~l~~~~~~~-~~~~~~~~~~-~~~i~y~~i~t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE-  306 (358)
T PLN00411        231 IVTSMIGLVVEKNNP-SVWIIHFDIT-LITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLND-  306 (358)
T ss_pred             HHHHHHHHHHccCCc-ccceeccchH-HHHHHHHHHHH-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCC-
Confidence            555444443322110 0111112333 23466666654 456655 789999999999999999999999999999996 


Q ss_pred             CcchhhhhHHHHHHHHHHHHHhhhhcC
Q 038856          230 PFDLFNIVGQALGFLGSCFYAYCKLQG  256 (257)
Q Consensus       230 ~~t~~~~~G~~li~~g~~~~~~~k~~~  256 (257)
                      ++++.+++|++++++|+++.++.|++|
T Consensus       307 ~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        307 SLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            999999999999999999999887664

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=1e-28  Score=200.22  Aligned_cols=236  Identities=21%  Similarity=0.284  Sum_probs=219.5

Q ss_pred             CCCcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhc
Q 038856           20 TTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAG   99 (257)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~   99 (257)
                      +.+++.+..++++|+++.+..++.++|++++|.+++++++.|+++.+|+.++.++++|+|-+.....++++++.|-.+-.
T Consensus        94 ~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv  173 (347)
T KOG1442|consen   94 SLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV  173 (347)
T ss_pred             cccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecc
Confidence            34578889999999999999999999999999999999999999999999999999999999999999999999988755


Q ss_pred             ccc---cccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchh
Q 038856          100 ARD---LSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPG  176 (257)
Q Consensus       100 ~~~---~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  176 (257)
                      -.|   ...++.|.++++.+.++-|+..+++||.....+-.-|.+.+|+++.+.+.++|...+.||.+....+++.++..
T Consensus       174 dqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~  253 (347)
T KOG1442|consen  174 DQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIK  253 (347)
T ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHH
Confidence            444   45678999999999999999999999887655556789999999999999999999999999999999988999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhcC
Q 038856          177 FQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQG  256 (257)
Q Consensus       177 ~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~~  256 (257)
                      +|..+.++|++++.++|...+.+|-+||+++++.+..|.+...+++..+++| ..+...|-|-++++.|..+|++.|++|
T Consensus       254 Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E-~ks~lwwtsn~~vLvgs~~YT~vk~~e  332 (347)
T KOG1442|consen  254 FWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSE-TKSGLWWTSNIVVLVGSLAYTLVKEHE  332 (347)
T ss_pred             HHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHH-HhhhheeeeeEEEEehhHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999996 999999999999999999999988643

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.94  E-value=1.8e-24  Score=185.50  Aligned_cols=222  Identities=14%  Similarity=0.073  Sum_probs=183.3

Q ss_pred             ChhHHHHHhHHHHHH-HHHHHHhhhhh-ccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccc
Q 038856           24 PLKTLVHTLPLALSY-LLYMLITMEAV-RGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGAR  101 (257)
Q Consensus        24 ~~~~~~~~~~~~~~~-~~~~~~~~~al-~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~  101 (257)
                      +++++++....|.+. ...+.+.+.+. ++++++.++++.++.|+++++++++ +|||++++++.++.++++|+.++..+
T Consensus        64 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         64 TLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            466777777888665 56677888888 9999999999999999999999986 69999999999999999999887543


Q ss_pred             -ccccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHH
Q 038856          102 -DLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVV  180 (257)
Q Consensus       102 -~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (257)
                       +.+.+..|+.+++.++++||.+.+..||..++   ++.....++...+.+.+.+.....++.     .....+...|..
T Consensus       143 ~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  214 (292)
T PRK11272        143 GNLSGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGER-----LTALPTLSGFLA  214 (292)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCc-----ccccCCHHHHHH
Confidence             34556679999999999999999999987542   334556778777777777766544321     111134556788


Q ss_pred             HHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          181 MLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       181 l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      +++.++++....+.. ++++|+.++.+.+.+.+++|+.+++++++++|| ++|+.+++|..+++.|+++.++.++|
T Consensus       215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E-~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGE-TLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            888899888887766 789999999999999999999999999999996 99999999999999999998877665

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.94  E-value=1.5e-24  Score=182.83  Aligned_cols=215  Identities=19%  Similarity=0.189  Sum_probs=179.6

Q ss_pred             ChhHHHHHhHHHHH-HHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccc
Q 038856           24 PLKTLVHTLPLALS-YLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARD  102 (257)
Q Consensus        24 ~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~  102 (257)
                      ++++++..+..+.+ ....+.+.+.|++|++++++.++.++.|+++++++++++|||++++++.+++++++|+.++..++
T Consensus        42 ~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~  121 (260)
T TIGR00950        42 PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG  121 (260)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC
Confidence            45556666666654 57888999999999999999999999999999999999999999999999999999998875443


Q ss_pred             -cccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHH
Q 038856          103 -LSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVM  181 (257)
Q Consensus       103 -~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  181 (257)
                       .+.+..|+.+++.++++++.+.+..|+..++.+.++.+...+....+.+.+.+.....++..       ..+...|..+
T Consensus       122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~  194 (260)
T TIGR00950       122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-------QALSLQWGAL  194 (260)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-------CcchHHHHHH
Confidence             44556899999999999999999999988755444555555677788888877766544321       1244456778


Q ss_pred             HHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHH
Q 038856          182 LLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGS  246 (257)
Q Consensus       182 ~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~  246 (257)
                      ++.++++...++.. ++++|+.++.+++.+.+++|+++++++++++|| ++++.+++|..+++.|+
T Consensus       195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E-~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGE-TLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHhc
Confidence            88888887777776 889999999999999999999999999999996 99999999999999886

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.94  E-value=4e-24  Score=183.98  Aligned_cols=224  Identities=10%  Similarity=0.079  Sum_probs=171.6

Q ss_pred             HHhHHHHHH-HHHHHHhhhhhcc-ccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccc---cc
Q 038856           30 HTLPLALSY-LLYMLITMEAVRG-INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARD---LS  104 (257)
Q Consensus        30 ~~~~~~~~~-~~~~~~~~~al~~-~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~---~~  104 (257)
                      ..+..+... .....+.+.+++| .|++.+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++   .+
T Consensus        60 ~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~  139 (299)
T PRK11453         60 LLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQH  139 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcc
Confidence            344445543 3445566788887 689999999999999999999999999999999999999999998876542   23


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhcccCC-CChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHH
Q 038856          105 FDAYGYAVVFIANICTAAYLAFISRIGRSSG-LSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLL  183 (257)
Q Consensus       105 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  183 (257)
                      .+..|+.+++.+++++|.|++..||..++.+ .+......++...+...+.......++.....+.....++..|..+++
T Consensus       140 ~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  219 (299)
T PRK11453        140 VAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMY  219 (299)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHH
Confidence            3457999999999999999999999765322 222334455555544433333322222111001011245667889999


Q ss_pred             HHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          184 SCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       184 ~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                      .++++...+|.. ++++++.+|.+.+.+.+++|++++++|++++|| ++++.+++|.++++.|+++..+.++
T Consensus       220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE-~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDE-RLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHHHhcchh
Confidence            999999999987 788999999999999999999999999999996 9999999999999999998776654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.94  E-value=4e-24  Score=183.66  Aligned_cols=212  Identities=17%  Similarity=0.180  Sum_probs=161.2

Q ss_pred             HHhHHHHHHHHHHHHhhhhhc----cccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccccc-
Q 038856           30 HTLPLALSYLLYMLITMEAVR----GINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLS-  104 (257)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~al~----~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~-  104 (257)
                      ..+..++.+..++.+.+.+++    ++++..+.++.++.|+++.+++++++|||++++++.+++++++|++++..++.+ 
T Consensus        63 ~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~  142 (295)
T PRK11689         63 YLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGL  142 (295)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccc
Confidence            334444556667777777765    467788899999999999999999999999999999999999999887654321 


Q ss_pred             ----------cchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCc
Q 038856          105 ----------FDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFY  174 (257)
Q Consensus       105 ----------~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~  174 (257)
                                .+..|+.+++.+++++|.|++..||..++  .++.....   ..+...+.+.....++.      ....+
T Consensus       143 ~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~------~~~~~  211 (295)
T PRK11689        143 SLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQP------AMVFS  211 (295)
T ss_pred             hhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCc------cccCC
Confidence                      23469999999999999999999998763  45554322   22233333322322221      11234


Q ss_pred             hhHHHHHHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          175 PGFQVVMLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       175 ~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      ...|..+++.++ +....|.. ++++|+.+|.+.+...+++|++++++|++++|| ++++.+++|.++++.|+++....+
T Consensus       212 ~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE-~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        212 LPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLST-PLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHhHHHHhhhH
Confidence            555666777775 45555655 899999999999999999999999999999996 999999999999999997776554


Q ss_pred             h
Q 038856          254 L  254 (257)
Q Consensus       254 ~  254 (257)
                      +
T Consensus       290 ~  290 (295)
T PRK11689        290 R  290 (295)
T ss_pred             h
Confidence            3

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.92  E-value=6.3e-23  Score=176.03  Aligned_cols=218  Identities=13%  Similarity=0.077  Sum_probs=174.2

Q ss_pred             CcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccc
Q 038856           22 LVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGAR  101 (257)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~  101 (257)
                      +.++|+++..+..|+++...+.+.+++++++|++.+.++.++.|+++++++    +||+++  ..++.++++|+.++..+
T Consensus        65 ~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~  138 (293)
T PRK10532         65 RFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPL  138 (293)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeec
Confidence            346778888888888888888899999999999999999999999999876    355544  44567778998876432


Q ss_pred             --c-cccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHH
Q 038856          102 --D-LSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQ  178 (257)
Q Consensus       102 --~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  178 (257)
                        + .+.+..|+.+++.+++++|.|.+..||..++  .++... .++...+...+.|.....++       ....+...|
T Consensus       139 ~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~  208 (293)
T PRK10532        139 GQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE--HGPATV-AIGSLIAALIFVPIGALQAG-------EALWHWSIL  208 (293)
T ss_pred             CCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc--CCchHH-HHHHHHHHHHHHHHHHHccC-------cccCCHHHH
Confidence              2 2345679999999999999999999998763  455554 45566666666666554321       111344456


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhcC
Q 038856          179 VVMLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQG  256 (257)
Q Consensus       179 ~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~~  256 (257)
                      ..+++.++++...+|.. ++++++.+|.+++.+.+++|++++++|++++|| ++++.+++|.++++.|++.+.+.++||
T Consensus       209 ~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE-~~~~~~~iG~~lIl~~~~~~~~~~~~~  286 (293)
T PRK10532        209 PLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGE-TLTLIQWLALGAIIAASMGSTLTIRRE  286 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            66778999999888876 899999999999999999999999999999996 999999999999999999998776654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.92  E-value=1e-24  Score=172.16  Aligned_cols=230  Identities=21%  Similarity=0.334  Sum_probs=206.1

Q ss_pred             ChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc
Q 038856           24 PLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL  103 (257)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~  103 (257)
                      +.++.|+|+|.+++...+++....++||.+++.+++.|+++.+.++..+.+++|+|.+..+..+..++++..++..++|.
T Consensus        64 R~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~  143 (309)
T COG5070          64 RLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ  143 (309)
T ss_pred             ehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999889887


Q ss_pred             ccc-------hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchh
Q 038856          104 SFD-------AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPG  176 (257)
Q Consensus       104 ~~~-------~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  176 (257)
                      |..       ..|+.|+...++..+++.+..|+..+-.+...++.++|+++.+.|+++.+++..||++.. +.....+..
T Consensus       144 q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d  222 (309)
T COG5070         144 QASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVD  222 (309)
T ss_pred             hHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChH
Confidence            421       269999999999999999999987765566778899999999999999999999987643 222223445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          177 FQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       177 ~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      .+.++..+|++++...|+..|+++-+|++++|+++.+++....+.|.++||| |.+.+.+..+.+-..+..+|++.|.+
T Consensus       223 ~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffda-p~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         223 SLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDA-PVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             HHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5778999999999999999999999999999999999999999999999985 99999999999999999999988754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.92  E-value=1.1e-22  Score=174.84  Aligned_cols=215  Identities=9%  Similarity=-0.029  Sum_probs=157.4

Q ss_pred             hhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccccc
Q 038856           25 LKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLS  104 (257)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~  104 (257)
                      ++++......++....++.++++|++++|+++++++.++.|+++++++++++|||++++++.+++++++|++++..++.+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~  149 (296)
T PRK15430         70 PQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS  149 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            33333333444556788999999999999999999999999999999999999999999999999999999987544322


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCch-hHHHHHHH
Q 038856          105 FDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYP-GFQVVMLL  183 (257)
Q Consensus       105 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~  183 (257)
                      .    ..++++++++||.|.+..|+..++...+......++.+.+.+...+..   ++..   . ....++ ..+..+++
T Consensus       150 ~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~-~~~~~~~~~~~~~~~  218 (296)
T PRK15430        150 L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSST---S-HMGQNPMSLNLLLIA  218 (296)
T ss_pred             c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCc---c-cccCCcHHHHHHHHH
Confidence            2    256888999999999999886542222333344455555444332221   1110   0 001122 22344555


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          184 SCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       184 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      .++.+....+..+.++|+.+|.+.+.+.+++|++++++|++++|| ++++.+++|++++++|+.+...
T Consensus       219 ~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E-~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        219 AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGE-KPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            565444434444899999999999999999999999999999996 9999999999999888776653

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.91  E-value=7.1e-23  Score=176.14  Aligned_cols=226  Identities=15%  Similarity=0.129  Sum_probs=182.7

Q ss_pred             CcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccc
Q 038856           22 LVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGAR  101 (257)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~  101 (257)
                      +..++++++++..+++-...+++.+.|++|++++.++++.+++.+++++++++++|+|+++.++.|++++++|+.++...
T Consensus        73 ~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   73 KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            34456778899999999999999999999999999999999999999999999999999999999999999999987665


Q ss_pred             cc---------ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCC
Q 038856          102 DL---------SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLL  172 (257)
Q Consensus       102 ~~---------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~  172 (257)
                      |.         +....|+.+++.++++||.+++.+|+..+  +.+..+...+..+++.++..+...+.| ..+..+..  
T Consensus       153 D~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~ile-~~~i~~~~--  227 (334)
T PF06027_consen  153 DVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAILE-RSGIESIH--  227 (334)
T ss_pred             cccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHhee-hhhhhccC--
Confidence            43         12367999999999999999999999988  456777788888888888777665543 32222222  


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          173 FYPGFQVVMLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       173 ~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      ++...+..++.-++ +....|+. -..++..||+.+++......+.++++++++||+ ++++..++|.+++++|.++|+.
T Consensus       228 w~~~~~~~~v~~~~-~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~-~~~~ly~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  228 WTSQVIGLLVGYAL-CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGY-KFSWLYILAFALIIIGFVVYNL  305 (334)
T ss_pred             CChhhHHHHHHHHH-HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCc-cccHHHHHHHHHHHHHhheEEc
Confidence            34443333332222 23333443 567899999999998888899999999999996 9999999999999999999987


Q ss_pred             hhh
Q 038856          252 CKL  254 (257)
Q Consensus       252 ~k~  254 (257)
                      .+.
T Consensus       306 ~~~  308 (334)
T PF06027_consen  306 AES  308 (334)
T ss_pred             cCC
Confidence            543

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.89  E-value=7.2e-22  Score=168.55  Aligned_cols=217  Identities=17%  Similarity=0.123  Sum_probs=160.2

Q ss_pred             ChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc
Q 038856           24 PLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL  103 (257)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~  103 (257)
                      +++.+...+..++.......+.+.++++.+++.++.+.++.|+++.+++++++|||++++++.++.+++.|+.++..++.
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~  138 (281)
T TIGR03340        59 PATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF  138 (281)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc
Confidence            34444445555566788899999999999999999999999999999999999999999999999999999988765432


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHHHHhcccCC--CChhhHHHHHHHHH-HHHHHHHHHhcCchhhhhcCCCCCchhHHH
Q 038856          104 -SFDAYGYAVVFIANICTAAYLAFISRIGRSSG--LSSFGLMWCNGIIC-TPILLFWTSFRGDLEVTMNFPLLFYPGFQV  179 (257)
Q Consensus       104 -~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~l~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (257)
                       +.+..|+.+++.++++++.|.+..|+..++.+  .+......++.... .+.. +.....++.      +...+...+.
T Consensus       139 ~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~  211 (281)
T TIGR03340       139 AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFL-LLYLKRHGR------SMFPYARQIL  211 (281)
T ss_pred             cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHH-HHHHHHhcc------chhhhHHHHH
Confidence             34557888999999999999998887643221  11112222333222 2221 211111111      0001112234


Q ss_pred             HHHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHH
Q 038856          180 VMLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCF  248 (257)
Q Consensus       180 ~l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~  248 (257)
                      .+++.+.+....+|.. ++++++.++.+.+...+++|++++++|++++|| ++++.+++|.+++++|+++
T Consensus       212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE-~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNE-RWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHhHHh
Confidence            5556666666666655 889999999999999999999999999999996 9999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.87  E-value=1.1e-21  Score=161.72  Aligned_cols=233  Identities=19%  Similarity=0.261  Sum_probs=199.0

Q ss_pred             CCCCCcChhH-HHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhh
Q 038856           18 NPTTLVPLKT-LVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAF   96 (257)
Q Consensus        18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~   96 (257)
                      +.+.+.+|++ +++..|+|+..+..+.+.|++++|+|++.+++.|+..++|+.+++.++.-||++|.-.+.+.++-+|++
T Consensus        73 r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glf  152 (349)
T KOG1443|consen   73 RARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLF  152 (349)
T ss_pred             ccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhee
Confidence            3345777776 688889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccccchhhHHHHHHHHHHHHHHHHHHHHhcccCC---CChhhHHHHHHHHHHHHHHHHHHhcCchhhhh---cCC
Q 038856           97 LAGARDLSFDAYGYAVVFIANICTAAYLAFISRIGRSSG---LSSFGLMWCNGIICTPILLFWTSFRGDLEVTM---NFP  170 (257)
Q Consensus        97 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~---~~~  170 (257)
                      +..+.+.|++..|..+..+++.+.++...++|.++++.+   .+|..+++...+.....++|..+..|.+....   .+.
T Consensus       153 lft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~  232 (349)
T KOG1443|consen  153 LFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFR  232 (349)
T ss_pred             EEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHH
Confidence            999999999999999999999999999999998886544   57888889888888888888877665433210   111


Q ss_pred             CCCc---hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHH
Q 038856          171 LLFY---PGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSC  247 (257)
Q Consensus       171 ~~~~---~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~  247 (257)
                      ...+   ......+.+.|..++..-++.+..+.+++..+.|+.+..|.+.+.++|..+.+| .++..+|+|..++.+|+.
T Consensus       233 ~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d-~ls~lN~~Gl~i~~agi~  311 (349)
T KOG1443|consen  233 FQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKD-QLSLLNWLGLAICLAGIL  311 (349)
T ss_pred             hcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhc-chhhhHHHHHHHHHHHHH
Confidence            1111   123345677777788888888999999999999999999999999999999996 999999999999999999


Q ss_pred             HHHh
Q 038856          248 FYAY  251 (257)
Q Consensus       248 ~~~~  251 (257)
                      .+.+
T Consensus       312 ~~~~  315 (349)
T KOG1443|consen  312 LHRN  315 (349)
T ss_pred             Hhcc
Confidence            9944

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.2e-21  Score=156.17  Aligned_cols=226  Identities=19%  Similarity=0.143  Sum_probs=195.0

Q ss_pred             CcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccc
Q 038856           22 LVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGAR  101 (257)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~  101 (257)
                      ++++..-+.+..++..|.+.++..|.|+||.|.++..+.+++.|+.+++++.++.|++++|+++++++++++|+++..+.
T Consensus        79 ~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK  158 (337)
T KOG1580|consen   79 EIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYK  158 (337)
T ss_pred             cccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcc
Confidence            34444457888999999999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             cc-------ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCc
Q 038856          102 DL-------SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFY  174 (257)
Q Consensus       102 ~~-------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~  174 (257)
                      +-       .--..|-.+.+++....+.....++|+...++.+..+++++.++.+.+.+-.-.+.+||......+. ...
T Consensus       159 ~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~Rh  237 (337)
T KOG1580|consen  159 ENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRH  237 (337)
T ss_pred             ccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-Hhc
Confidence            32       1224789999999999999999999888777788889999999999999888778888874432222 245


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHH
Q 038856          175 PGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFY  249 (257)
Q Consensus       175 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~  249 (257)
                      |..|.-+.+.++.+...+.+.|..+...+|.+-|++...++.++++.|+++|++ +++..||+|..+++.|...=
T Consensus       238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~n-pls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNN-PLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcC-cCcHHHHHHHHHHHHHhhhH
Confidence            666777888888888888888999999999999999999999999999999995 99999999999999887643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.86  E-value=4.8e-19  Score=150.85  Aligned_cols=214  Identities=19%  Similarity=0.221  Sum_probs=169.5

Q ss_pred             HHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHH-HHhCcccCcchhHHHHHHHhhhhhhcccccccc--
Q 038856           30 HTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEY-LLTGQKHSLPVVGSVGIILLGAFLAGARDLSFD--  106 (257)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~-l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~~~--  106 (257)
                      ..+..++.......+++.++++++++.++.+.++.|+++.++++ +++|||++++++.++.+.+.|+.++..++...+  
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~  151 (292)
T COG0697          72 LLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL  151 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH
Confidence            33444455688899999999999999999999999999999997 667999999999999999999999877665433  


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHH-HHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHH
Q 038856          107 -AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMW-CNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLS  184 (257)
Q Consensus       107 -~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  184 (257)
                       ..|+.+++.+++++|.+.+..|+..   +.++..... ++.........+...  .+.      ....+...+..+.+.
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~  220 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFL--SGF------GAPILSRAWLLLLYL  220 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHh--ccc------cccCCHHHHHHHHHH
Confidence             5899999999999999999999876   344544444 444322222222211  111      112344557778888


Q ss_pred             HHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          185 CIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       185 ~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      ++.+....+.. +.+.++.++...+...+.+|+.+++++++++|| +++..+++|..+++.|+.+...+|++
T Consensus       221 g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e-~~~~~~~~G~~li~~g~~l~~~~~~~  291 (292)
T COG0697         221 GVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE-PLSPAQLLGAALVVLGVLLASLRARR  291 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhccccc
Confidence            88877655554 889999999999999999999999999999996 99999999999999999999877443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.84  E-value=2.8e-19  Score=147.75  Aligned_cols=229  Identities=17%  Similarity=0.151  Sum_probs=200.6

Q ss_pred             hhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccc---
Q 038856           25 LKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGAR---  101 (257)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~---  101 (257)
                      ++.+.++...++.....-.++..|++|++-++..+.|++.-+.+++++.++.|+|+++.+++...++..|+.+....   
T Consensus        80 ~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s  159 (327)
T KOG1581|consen   80 VAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNS  159 (327)
T ss_pred             CCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCC
Confidence            44567888888888999999999999999999999999999999999999999999999999999999999876432   


Q ss_pred             cc------ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCch
Q 038856          102 DL------SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYP  175 (257)
Q Consensus       102 ~~------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~  175 (257)
                      |.      ..++.|+.++..+.+..++.+..++++.++++.++++++++.++++.+.........+.+....++.. .++
T Consensus       160 ~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~hp  238 (327)
T KOG1581|consen  160 DSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EHP  238 (327)
T ss_pred             CCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cCh
Confidence            21      23478999999999999999999999999999999999999999999888777666665554444443 466


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          176 GFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       176 ~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      +.+.-+++.+.++.+.|.+.+..+++.+|.+.+.+...+++++++++.++|| ++++..||.|..+++.|..+-.+.|.+
T Consensus       239 ~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~-h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  239 DVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFG-HPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhC-CccchhhccCeeeehHHHHHHHHHHHh
Confidence            7777788888888888999999999999999999999999999999999999 599999999999999999988777654

>TIGR00688 rarD rarD protein

Probab=99.80  E-value=1.4e-17  Score=140.21  Aligned_cols=185  Identities=9%  Similarity=-0.040  Sum_probs=134.5

Q ss_pred             HHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccccccch
Q 038856           28 LVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDA  107 (257)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~~~~  107 (257)
                      +......|++...++.+++.|++++++++++++.++.|+++++++++++|||++++++++++++++|++++..++.+.+ 
T Consensus        70 ~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~-  148 (256)
T TIGR00688        70 ILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP-  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch-
Confidence            3445667777888999999999999999999999999999999999999999999999999999999988754332222 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHH
Q 038856          108 YGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIM  187 (257)
Q Consensus       108 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  187 (257)
                         .+++++++++|.|.+..|+..++   +..+... ..+...+...+.....+..    ..........|..+++.++.
T Consensus       149 ---~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~  217 (256)
T TIGR00688       149 ---WEALVLAFSFTAYGLIRKALKNT---DLAGFCL-ETLSLMPVAIYYLLQTDFA----TVQQTNPFPIWLLLVLAGLI  217 (256)
T ss_pred             ---HHHHHHHHHHHHHHHHHhhcCCC---CcchHHH-HHHHHHHHHHHHHHHhccC----cccccCchhHHHHHHHHHHH
Confidence               45788999999999999887542   2222222 1222222222222211111    00111112256677777776


Q ss_pred             HHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHh
Q 038856          188 AFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLL  225 (257)
Q Consensus       188 ~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~  225 (257)
                      + ...|.. +.++|+.+|.+.+...+++|++++++|.++
T Consensus       218 t-~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       218 T-GTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             H-HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            4 445555 899999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.80  E-value=1e-17  Score=135.05  Aligned_cols=220  Identities=17%  Similarity=0.140  Sum_probs=182.3

Q ss_pred             CCCCCcChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhh
Q 038856           18 NPTTLVPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFL   97 (257)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~   97 (257)
                      ..+++.++++++.....|+....+|.+++.+++.+|.+.+..+.++.|+.+++++.    +  +.++...+.+.+.|+.+
T Consensus        61 Pwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~l  134 (292)
T COG5006          61 PWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWL  134 (292)
T ss_pred             HHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHh
Confidence            34567888999999999999999999999999999999999999999998887643    2  34566677788888887


Q ss_pred             hccc---ccccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCc
Q 038856           98 AGAR---DLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFY  174 (257)
Q Consensus        98 ~~~~---~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~  174 (257)
                      +.-.   ..+.|+.|..+++.+..||+.|.+.-||..+  ..+..+-+...+..+.+...|+.....+       +...+
T Consensus       135 L~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~  205 (292)
T COG5006         135 LLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFS  205 (292)
T ss_pred             heeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcC
Confidence            6432   3467899999999999999999999999875  4456667788888888888887653222       23345


Q ss_pred             hhHHHHHHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          175 PGFQVVMLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       175 ~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      +..+..-+..++++..+-|+. ..++++.++.+++++..++|.++.+.|++++|| .+|+.||+|++.+++++.-.++.-
T Consensus       206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e-~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGE-TLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhcccccc
Confidence            665666677888889999998 899999999999999999999999999999996 999999999999999887555443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.79  E-value=2.4e-17  Score=137.18  Aligned_cols=212  Identities=17%  Similarity=0.136  Sum_probs=168.3

Q ss_pred             ChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc
Q 038856           24 PLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL  103 (257)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~  103 (257)
                      ++|+..++...+++|...+.+.+.++++++++++++++.+..+++++++++++|||++++||.++.+.++|+.+...++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            35677788889999999999999999999999999999999999999999999999999999999999999998733211


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhh
Q 038856          104 -----------------SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVT  166 (257)
Q Consensus       104 -----------------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~  166 (257)
                                       +....|....++++++.++..++.+|+.|+.+.+.+......+..+.++.++.....+ .+..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~-~~~~  171 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSD-GSAI  171 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccc-cccc
Confidence                             1124799999999999999999999999887766666666666666666655544332 2211


Q ss_pred             h--cCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHH
Q 038856          167 M--NFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQAL  241 (257)
Q Consensus       167 ~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~l  241 (257)
                      .  .+...++...|..+....+.|...    ...+|+.+...-+....+..+.+.+.++++||. ++|....+|..+
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~-~~s~~f~lg~~~  243 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGF-PPSLSFLLGAAL  243 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CCchHHhhheec
Confidence            1  122224555566566666555544    357899999999999999999999999999985 999999999765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.79  E-value=2.2e-18  Score=140.15  Aligned_cols=227  Identities=18%  Similarity=0.129  Sum_probs=197.5

Q ss_pred             HHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc----
Q 038856           28 LVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL----  103 (257)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~----  103 (257)
                      ||.+..++.+..+.+.+.|-++.|++.++..+.|++..+.+++.+.++-++|+.+.++.+..++.+|.......|.    
T Consensus       106 ~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP  185 (367)
T KOG1582|consen  106 WRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP  185 (367)
T ss_pred             hhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC
Confidence            3667788888889999999999999999999999999999999999999999999999999999999998876664    


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHH
Q 038856          104 SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLL  183 (257)
Q Consensus       104 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  183 (257)
                      ++|..|..+.-++..+.|+-...++|.++..+.++.++.+|..-++.+++...+..+||....+.+...++.+.....++
T Consensus       186 NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~  265 (367)
T KOG1582|consen  186 NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFL  265 (367)
T ss_pred             CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHH
Confidence            67789999999999999999999999888878888999999999999999988888999887777766555544444455


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          184 SCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       184 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      -...++..+.+....++..++..+..+.+.++-.++++|+++|. +|+|.+..-|..+++.|+++-.+.|+.
T Consensus       266 ~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFs-KPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  266 FSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFS-KPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHc-CchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            55555555455556788899999999999999999999999998 599999999999999999998888743

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.77  E-value=8.8e-18  Score=130.43  Aligned_cols=142  Identities=28%  Similarity=0.466  Sum_probs=125.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccc-----CCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCC---C-C--CchhH
Q 038856          109 GYAVVFIANICTAAYLAFISRIGRS-----SGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFP---L-L--FYPGF  177 (257)
Q Consensus       109 G~~~~l~a~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~---~-~--~~~~~  177 (257)
                      |.++++.+.++.|+++++.|+..++     .+.|++++.+|+++.+.+.+.|.....|+........   . .  .++..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999998877     6899999999999999999999988877665221111   0 1  14466


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          178 QVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       178 ~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      +..++..|+.++..+++.+.+++++||++.++.+.+|.+..++.|+++||| ++|+.++.|..+.+.|+++|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~-~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGE-PITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCC-cCCHHHHHHHHHHHHHHheeeC
Confidence            888999999999999999999999999999999999999999999999996 9999999999999999999985

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.76  E-value=1.8e-17  Score=140.56  Aligned_cols=223  Identities=16%  Similarity=0.132  Sum_probs=169.1

Q ss_pred             HHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc----
Q 038856           28 LVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL----  103 (257)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~----  103 (257)
                      .+--+....+....++++|.||.|++++-.+++.++.-.|+..++.++..||+++.+.+++.+.+.|++++..+|.    
T Consensus       159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~  238 (416)
T KOG2765|consen  159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS  238 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence            3333444455677888899999999999999999999999999999999999999999999999999999877643    


Q ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHHHHhcccC--CCChhhHHHHHHHHHHHHHHHHHHhcCchh-hhhcCCCCCchh
Q 038856          104 ----SFDAYGYAVVFIANICTAAYLAFISRIGRSS--GLSSFGLMWCNGIICTPILLFWTSFRGDLE-VTMNFPLLFYPG  176 (257)
Q Consensus       104 ----~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~  176 (257)
                          +....|..+++.+|+.||.|.+..||...++  +.|--....|-.++..+++.|...+.+... ...+.|.  +..
T Consensus       239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~--~~q  316 (416)
T KOG2765|consen  239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPS--STQ  316 (416)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCC--Cce
Confidence                2336899999999999999999999977654  455544455666777777765544322110 0122332  222


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          177 FQVVMLLSCIMAFL-INYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       177 ~~~~l~~~~~~~~~-~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                       ...++..+.++.+ --|...++.-.++|+..++...+....+++....+=| .++++.+++|.+.+++|.+..++..+
T Consensus       317 -~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~-~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  317 -FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKG-KHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             -eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcC-CCCCHHHHHHHHHHHHHHhheecccc
Confidence             2234444444444 4566678899999999999888888888888777766 59999999999999999998886653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.75  E-value=3e-16  Score=134.41  Aligned_cols=210  Identities=14%  Similarity=0.160  Sum_probs=161.2

Q ss_pred             HHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHH-HHHHHHHHHHHHHhCcccCcch----hHHHHHHHhhhhhhccc
Q 038856           27 TLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRR-TTVAFTMIVEYLLTGQKHSLPV----VGSVGIILLGAFLAGAR  101 (257)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~-~~pv~~~i~~~l~~~e~~~~~~----~~~~~~~~~Gv~~~~~~  101 (257)
                      .+..-+..|+++...+.+++.|.++++++.+..+.+ +.+++..+++.+++|||.++++    +.++++.++|+++....
T Consensus        58 ~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        58 IFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            334445555667888899999999999999999988 8889999999999999999999    99999999999887543


Q ss_pred             ccc-------cc-hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHH---H-HHHHHHHHHHhcCchhhhhcC
Q 038856          102 DLS-------FD-AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGI---I-CTPILLFWTSFRGDLEVTMNF  169 (257)
Q Consensus       102 ~~~-------~~-~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l---~-~~~~l~~~~~~~~~~~~~~~~  169 (257)
                      +.+       .+ ..|..++++++++|+.|.+..|+.    +.|+++..+.+..   . +.++..+. .   +     ..
T Consensus       138 ~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~---~-----~~  204 (290)
T TIGR00776       138 KDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-I---L-----AK  204 (290)
T ss_pred             cccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-h---c-----cc
Confidence            221       33 689999999999999999999875    2577777544443   3 33333222 1   0     00


Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHH-HHHhh-ccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhh----hHHHHHH
Q 038856          170 PLLFYPGFQVVMLLSCIMAFLINYYV-FLNTI-LNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNI----VGQALGF  243 (257)
Q Consensus       170 ~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~-~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~----~G~~li~  243 (257)
                      +  ...+.+......|++ ...++.. +...+ +.++.+.+++.+++|+.+++.+++++|| +.++.|+    +|.++++
T Consensus       205 ~--~~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E-~~~~~~~~~~~iG~~lIi  280 (290)
T TIGR00776       205 P--LKKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGE-KKTKREMIAISVGIILII  280 (290)
T ss_pred             c--hHHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhcc-CCCcceeehhHHHHHHHH
Confidence            1  122223333447777 4556655 57788 8999999999999999999999999996 9999999    9999999


Q ss_pred             HHHHHHHhhh
Q 038856          244 LGSCFYAYCK  253 (257)
Q Consensus       244 ~g~~~~~~~k  253 (257)
                      .|+.+....|
T Consensus       281 ~~~~l~~~~~  290 (290)
T TIGR00776       281 IAANILGIGK  290 (290)
T ss_pred             HHHHHHhccC
Confidence            9998876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.74  E-value=6.3e-19  Score=143.03  Aligned_cols=218  Identities=13%  Similarity=0.113  Sum_probs=175.0

Q ss_pred             HHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccc-----c-
Q 038856           29 VHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGAR-----D-  102 (257)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~-----~-  102 (257)
                      +.++..|++........++|++|++.+++.++...+|+++.+++|.++||++++.+.++..+.+.|+++..-+     | 
T Consensus        98 ~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~  177 (346)
T KOG4510|consen   98 KWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDT  177 (346)
T ss_pred             EEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCC
Confidence            3445568888888888899999999999999999999999999999999999999999999999999986332     1 


Q ss_pred             -----c---ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCc
Q 038856          103 -----L---SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFY  174 (257)
Q Consensus       103 -----~---~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~  174 (257)
                           .   +.+..|-..++.+++..|--.+..|++.+  +.+....+.|.++++.+...+.....+++    ..|  +.
T Consensus       178 t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~----~lP--~c  249 (346)
T KOG4510|consen  178 TEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAV----QLP--HC  249 (346)
T ss_pred             ccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccce----ecC--cc
Confidence                 1   12346888888888888877788899887  45555555666666666655544333432    334  34


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          175 PGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       175 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                      ...|..++..|++++..|.....++++..+...++..+.+-+++.++.+++||| .+|+.+|.|+++++.+.++...+|.
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~-~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGH-WPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcC-CChHHHhhceeeeehhHHHHHHHHH
Confidence            445677888899999999888888888888888899999999999999999995 9999999999999999988887764


Q ss_pred             c
Q 038856          255 Q  255 (257)
Q Consensus       255 ~  255 (257)
                      .
T Consensus       329 a  329 (346)
T KOG4510|consen  329 A  329 (346)
T ss_pred             h
Confidence            3

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.1e-15  Score=129.68  Aligned_cols=225  Identities=16%  Similarity=0.154  Sum_probs=179.2

Q ss_pred             hhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccc--
Q 038856           25 LKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARD--  102 (257)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~--  102 (257)
                      +++..++...+.+|+..+.+.+.++.+.+++++++...+....|+++..++++||.+++||.++++.+.|+.++..+.  
T Consensus        89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            446677788888999988899999999999999999999999999999999999999999999999999999985221  


Q ss_pred             ---------cccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhh--hcCCC
Q 038856          103 ---------LSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVT--MNFPL  171 (257)
Q Consensus       103 ---------~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~--~~~~~  171 (257)
                               .+..+.|....+.++++.++-.++.+|++++.+.+.|-.....+.++.++........ |.+..  ..+-.
T Consensus       169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~  247 (345)
T KOG2234|consen  169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFY  247 (345)
T ss_pred             CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccc
Confidence                     1223679999999999999999999999987776666555555555555554443333 33322  22333


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          172 LFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       172 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      -++...|..++..++.|...+    ..+|+.+-..-.....+..+++.+.++.+|| .++|..-.+|..+++.++.+|+.
T Consensus       248 G~s~~vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~-~~~t~~F~lG~~lVi~Si~lY~~  322 (345)
T KOG2234|consen  248 GYSSIVWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFD-FQLTLYFLLGALLVILSIFLYSL  322 (345)
T ss_pred             cccHHHHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHcc-CCchHHHHHHHHHHHHHHHHhhc
Confidence            366667888888888777665    4567777777777777888999999999997 69999999999999999999996


Q ss_pred             hhhc
Q 038856          252 CKLQ  255 (257)
Q Consensus       252 ~k~~  255 (257)
                      .+.+
T Consensus       323 ~P~~  326 (345)
T KOG2234|consen  323 YPAR  326 (345)
T ss_pred             CCcc
Confidence            6554

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.73  E-value=3.2e-15  Score=123.63  Aligned_cols=216  Identities=16%  Similarity=0.085  Sum_probs=172.3

Q ss_pred             hHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccccc
Q 038856           26 KTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSF  105 (257)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~~  105 (257)
                      |.+......+.+...++..+.+|...-.+-++++..+..|++..+++.+++|||+++.|+.++.++.+||....+...+.
T Consensus        70 ~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~l  149 (293)
T COG2962          70 KTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSL  149 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            44556667778888999999999999999999999999999999999999999999999999999999999988877787


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHH
Q 038856          106 DAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSC  185 (257)
Q Consensus       106 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  185 (257)
                      ++..    +.=++.+++|... ||..   +.|+.+-.....+.-.|..+.+....++..+   +....+...+..++.+|
T Consensus       150 pwva----l~la~sf~~Ygl~-RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG  218 (293)
T COG2962         150 PWVA----LALALSFGLYGLL-RKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAG  218 (293)
T ss_pred             cHHH----HHHHHHHHHHHHH-HHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhh
Confidence            7544    4446788888876 5433   4677777777776666666666555444322   11113444566777777


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          186 IMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       186 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      ..+..--.....+-|+.+-.+.++++|++|....+++++++|| +++..+....+.+..|..+|+...
T Consensus       219 ~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E-~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         219 LVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGE-PFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            7755533333578899999999999999999999999999996 999999999999999999998653

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.71  E-value=1.5e-17  Score=135.61  Aligned_cols=231  Identities=21%  Similarity=0.328  Sum_probs=178.5

Q ss_pred             CCcChhHHHHHhHHHHHHHHHHHHhhhhhcc-ccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhc
Q 038856           21 TLVPLKTLVHTLPLALSYLLYMLITMEAVRG-INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAG   99 (257)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~   99 (257)
                      +++|+   |.+...-.+|...+.++|.++++ +|++.+.++|+..++.+|+++++++|+|++.+|+.++++..+|+++..
T Consensus        60 ~kipl---k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcT  136 (330)
T KOG1583|consen   60 PKIPL---KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICT  136 (330)
T ss_pred             CCCch---hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEE
Confidence            34454   55666777888999999999996 999999999999999999999999999999999999999999998863


Q ss_pred             c---cccc------------cc----hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHH-h
Q 038856          100 A---RDLS------------FD----AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTS-F  159 (257)
Q Consensus       100 ~---~~~~------------~~----~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~-~  159 (257)
                      .   .|..            .+    ..|..+..++.+..|.-.++++...|+++-++-+.++|..+.+.|.++...- +
T Consensus       137 l~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~di  216 (330)
T KOG1583|consen  137 LFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDI  216 (330)
T ss_pred             eecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchH
Confidence            2   1211            11    3599999999999999999999999998889999999999999887765421 1


Q ss_pred             cCchhhhhc-----CCCC--CchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcc
Q 038856          160 RGDLEVTMN-----FPLL--FYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFD  232 (257)
Q Consensus       160 ~~~~~~~~~-----~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t  232 (257)
                      ..++.....     .+..  .-|.-|..++..++.-....-..+..-.+++++++++.-++++.++.++|++.|++ ++|
T Consensus       217 v~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~N-pft  295 (330)
T KOG1583|consen  217 VSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFEN-PFT  295 (330)
T ss_pred             HHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecC-CCC
Confidence            111111111     1111  13444666666665533322222445567899999999999999999999999975 999


Q ss_pred             hhhhhHHHHHHHHHHHHHhhhhc
Q 038856          233 LFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       233 ~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      +..|+|.++++.|.++|+...++
T Consensus       296 ~~h~lGa~lVF~Gt~~fa~~~~~  318 (330)
T KOG1583|consen  296 PWHWLGAALVFFGTLLFANVWNH  318 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999866543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.62  E-value=1.8e-14  Score=117.98  Aligned_cols=220  Identities=17%  Similarity=0.165  Sum_probs=170.9

Q ss_pred             HHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc------
Q 038856           30 HTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL------  103 (257)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~------  103 (257)
                      ..++.+++-.....+-+.++.+++++.+|+++....+|+.+++.-+++++++.++|+++....+|++.+...|.      
T Consensus        88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p  167 (372)
T KOG3912|consen   88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDP  167 (372)
T ss_pred             eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCC
Confidence            44566777767777778899999999999999999999999999999999999999999999999999865543      


Q ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHh-----cCchhh-h----hc-
Q 038856          104 ----SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSF-----RGDLEV-T----MN-  168 (257)
Q Consensus       104 ----~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~-----~~~~~~-~----~~-  168 (257)
                          +.-..|+.+.+.+-+.-|...+..+|..++.+.+|.+...|+.+++..++-..+..     .++... .    ++ 
T Consensus       168 ~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD  247 (372)
T KOG3912|consen  168 YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED  247 (372)
T ss_pred             ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh
Confidence                22256999999999999999999999999999999999999998885554333221     111100 0    00 


Q ss_pred             ----CCC-CCchhHHHHHHHHHHHH--HHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHH
Q 038856          169 ----FPL-LFYPGFQVVMLLSCIMA--FLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQAL  241 (257)
Q Consensus       169 ----~~~-~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~l  241 (257)
                          +.. ..++  .+.+...+...  ..+|+......|..|+++-.++-.++.....+++.....| .+...|+.|..+
T Consensus       248 ~~~~~~~~~e~p--~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E-~f~llqilGFli  324 (372)
T KOG3912|consen  248 WGDAFAALQESP--SLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWE-YFHLLQILGFLI  324 (372)
T ss_pred             HHHHHHHhcCCc--hhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHH-HHHHHHHHHHHH
Confidence                000 0111  12333333332  2346666677888999999999999999999999999996 999999999999


Q ss_pred             HHHHHHHHHhh
Q 038856          242 GFLGSCFYAYC  252 (257)
Q Consensus       242 i~~g~~~~~~~  252 (257)
                      .+.|.++|+-.
T Consensus       325 Li~Gi~lY~~i  335 (372)
T KOG3912|consen  325 LIMGIILYNQI  335 (372)
T ss_pred             HHHHHHHHHHH
Confidence            99999999843

>TIGR00803 nst UDP-galactose transporter

Probab=99.47  E-value=6.8e-13  Score=109.39  Aligned_cols=192  Identities=15%  Similarity=0.142  Sum_probs=130.7

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc---------------------------c
Q 038856           52 INVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL---------------------------S  104 (257)
Q Consensus        52 ~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~---------------------------~  104 (257)
                      +++|.....++..++++++.++...+||++..++++.++...|++.....|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5788899999999999999999999999999999999999999875322211                           1


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCC--CCCchhHHHHHH
Q 038856          105 FDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFP--LLFYPGFQVVML  182 (257)
Q Consensus       105 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~  182 (257)
                      ..+.|....+.+.++.++..+++++..++++.+.+.......+++.+........ .+.+...+.+  ..++...|..++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  160 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLW-SDGTLISNFGFFIGYPTAVWIVGL  160 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhh-cccchhhccCcccCCchHHHHHHH
Confidence            2245677777788888888999888776544332222222222333221111111 1111111111  112232333332


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHH
Q 038856          183 LSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFY  249 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~  249 (257)
                      ...    ..+.+..+++|+.++...++....+++.+.++++++||| ++++.++.|..+++.|+.+|
T Consensus       161 ~~a----~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~-~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       161 LNV----GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDA-KISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHH----hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHHHHeeeEeC
Confidence            222    223445788999999999999999999999999999995 99999999999999987664

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.30  E-value=3.2e-11  Score=89.72  Aligned_cols=124  Identities=20%  Similarity=0.266  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHHHH-HH
Q 038856          118 ICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYY-VF  196 (257)
Q Consensus       118 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~  196 (257)
                      +++|.+.+..|+..+  +.|+.+..++....+.+ +.+.....+..+     ....+...+....+.++++...++. .+
T Consensus         1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHH
Confidence            467889999999888  47899999999998887 555555443321     1223444456666777775454454 48


Q ss_pred             HHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHH
Q 038856          197 LNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYA  250 (257)
Q Consensus       197 ~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~  250 (257)
                      .++++.++...+.+.+++|+.+.+++++++|| ++++.+++|.++++.|+++..
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e-~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLFLGE-RPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999996 999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.29  E-value=7.1e-12  Score=98.07  Aligned_cols=228  Identities=11%  Similarity=0.092  Sum_probs=164.2

Q ss_pred             CCCcChhH-HHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhh
Q 038856           20 TTLVPLKT-LVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLA   98 (257)
Q Consensus        20 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~   98 (257)
                      .+.++.|. .++..|.+++..+.++.+..|++.++++.++.+..+.-.|+.+++++.+|+|+...++++..+.+.|+++.
T Consensus        44 ~kG~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmi  123 (290)
T KOG4314|consen   44 DKGFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMI  123 (290)
T ss_pred             ccCceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEE
Confidence            34455443 35667788888999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccc--ccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHH-----HHHHHHHHHHhcCchhhhhcCCC
Q 038856           99 GARDL--SFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGII-----CTPILLFWTSFRGDLEVTMNFPL  171 (257)
Q Consensus        99 ~~~~~--~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~-----~~~~l~~~~~~~~~~~~~~~~~~  171 (257)
                      .+.|-  ..++.|...++++++..|.|.+..|+...+.+....  ..+.+-.     +..-..+..+.....++...+..
T Consensus       124 ay~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gda--a~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~  201 (290)
T KOG4314|consen  124 AYADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDA--AHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAA  201 (290)
T ss_pred             EeccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhH--HHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhh
Confidence            76543  456899999999999999999999998875444332  2222211     22222333333332222221211


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          172 LFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       172 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                          .-|..+.........+++..+..+....|...|+-......-..... ++++|..++.....|..+++.|.++...
T Consensus       202 ----~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiD-iL~q~l~~ntl~La~T~iI~i~FiLiii  276 (290)
T KOG4314|consen  202 ----APWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAID-ILFQELEFNTLFLAATCIICIGFILIII  276 (290)
T ss_pred             ----CCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHH-HHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence                11555666666666677777777888888888875444444445554 4455567899999999999999887665


Q ss_pred             hhh
Q 038856          252 CKL  254 (257)
Q Consensus       252 ~k~  254 (257)
                      ...
T Consensus       277 P~d  279 (290)
T KOG4314|consen  277 PED  279 (290)
T ss_pred             ccc
Confidence            443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.27  E-value=1.8e-13  Score=110.84  Aligned_cols=202  Identities=14%  Similarity=0.106  Sum_probs=153.7

Q ss_pred             HHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccc--------ccchhhHHH
Q 038856           41 YMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDL--------SFDAYGYAV  112 (257)
Q Consensus        41 ~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~--------~~~~~G~~~  112 (257)
                      .+++-..|.||++....+++.+-..+-+++++|+++|.|+.+.++.++.+++.|++.+...|.        +....|+.+
T Consensus        91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~l  170 (336)
T KOG2766|consen   91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFL  170 (336)
T ss_pred             ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEE
Confidence            344445789999999999999999999999999999999999999999999999998765543        223479999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHH
Q 038856          113 VFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLIN  192 (257)
Q Consensus       113 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  192 (257)
                      .++++-+||..++..+.+.+  +.|-.+++....+++.++.++- .+.+... .  ....++..  ....+...++...-
T Consensus       171 vi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~-~--~tl~w~~~--i~~yl~f~L~MFll  242 (336)
T KOG2766|consen  171 VIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQ-FIFERHH-V--STLHWDSA--IFLYLRFALTMFLL  242 (336)
T ss_pred             EEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHH-Hhhhccc-e--eeEeehHH--HHHHHHHHHHHHHH
Confidence            99999999999999988888  6788888888888888877665 3333211 0  01112221  11222233333334


Q ss_pred             HHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          193 YYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       193 ~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      |+. -..+|..|++.+++.-......+++.  ..|| -+++|...+..+.+..|.++|+-++
T Consensus       243 Ysl~pil~k~~~aT~~nlslLTsDmwsl~i--~~Fg-Yhv~wLY~laF~~i~~GliiYs~re  301 (336)
T KOG2766|consen  243 YSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFG-YHVDWLYFLAFATIATGLIIYSTRE  301 (336)
T ss_pred             HHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHh-cchhhhhHHHHHHHHHhhEEeeccc
Confidence            544 45688899999988888888888887  6777 4899999999999999999996443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.27  E-value=4.2e-11  Score=87.22  Aligned_cols=134  Identities=15%  Similarity=0.074  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHH
Q 038856          110 YAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAF  189 (257)
Q Consensus       110 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  189 (257)
                      ..+++.++++++...++.|--.+  +.||..-++.-++....++..+....+++.    .+...++..|.+++++|+.+.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~----~~~~~~~k~~lflilSGla~g   78 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQ----AGGEIGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCcee----cccccCcceehhhhHHHHHHH
Confidence            57899999999999999887776  678877777778888888877777777653    333356777999999997766


Q ss_pred             HHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHH
Q 038856          190 LINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYA  250 (257)
Q Consensus       190 ~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~  250 (257)
                      ..-++-|.++|+-.+..+..+.-..+++++++|++++|| ++|..+|+|+.++.+|.++-+
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E-~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGE-RLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhCeeeEe
Confidence            655666899999999999899999999999999999996 999999999999999987654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.07  E-value=4.3e-08  Score=81.93  Aligned_cols=209  Identities=13%  Similarity=0.129  Sum_probs=152.5

Q ss_pred             hHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHH-HHHHHHHHHHHHHHHhCcccCcchhH----HHHHHHhhhhhhcc
Q 038856           26 KTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTL-RRTTVAFTMIVEYLLTGQKHSLPVVG----SVGIILLGAFLAGA  100 (257)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~-~~~~pv~~~i~~~l~~~e~~~~~~~~----~~~~~~~Gv~~~~~  100 (257)
                      +.+..-+..|+++...+...+.|.+++.++.+.=+ ..++.+.+.+.+.++++|+.+..++.    ++++.++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            66777788899999999999999999988865433 36778889999999999998887764    77788899988765


Q ss_pred             cccc--------cchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCC
Q 038856          101 RDLS--------FDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLL  172 (257)
Q Consensus       101 ~~~~--------~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~  172 (257)
                      .|.+        ....|+...+++.+.|..|.+..|-    .+.|+++..+=|++-..+....+.....+     ..   
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqaiGm~i~a~i~~~~~~~-----~~---  190 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQAIGMLIGAFIFNLFSKK-----PF---  190 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHHHHHHHHHHHHhhcccc-----cc---
Confidence            5431        1245999999999999999999765    25788888777765433333333332211     00   


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchh----hhhHHHHHHHHHHH
Q 038856          173 FYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLF----NIVGQALGFLGSCF  248 (257)
Q Consensus       173 ~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~----~~~G~~li~~g~~~  248 (257)
                      .+.. ...-+..|++-...+.+.+.+.++.+....=.+..+..+++.+.|++++|| +=+..    .++|.+++++|.++
T Consensus       191 ~~k~-~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E-~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  191 FEKK-SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKE-KKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             cccc-hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEe-cCchhhHHHHHHHHHHHHHhhhc
Confidence            0111 233456666666667777777888888887788889999999999999997 55644    55788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.04  E-value=1.7e-08  Score=86.85  Aligned_cols=143  Identities=12%  Similarity=0.068  Sum_probs=106.6

Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHH
Q 038856          102 DLSFDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVM  181 (257)
Q Consensus       102 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  181 (257)
                      |.+....|..+.+.++++++...+..|.. .  +.++.++.++...++.+.+.+.....++.......  ..+...+...
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~   76 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQKIFML   76 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHHHHHH
Confidence            34445679999999999999999999764 3  58899999999999888777765544332111000  0122223223


Q ss_pred             HHHHHHHHHH-HHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          182 LLSCIMAFLI-NYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       182 ~~~~~~~~~~-~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      . .+.++... ....+++++++++..+++..+..|++.++++++++|| +++..+++|.++.++|+.+...
T Consensus        77 ~-~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E-~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         77 A-VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGE-RFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             H-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHHH
Confidence            3 33333443 4445899999999999999999999999999999996 9999999999999999987653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.02  E-value=9.3e-10  Score=80.99  Aligned_cols=79  Identities=18%  Similarity=0.180  Sum_probs=69.0

Q ss_pred             hHHHHHhHHHHHHH-HHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccccc
Q 038856           26 KTLVHTLPLALSYL-LYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLS  104 (257)
Q Consensus        26 ~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~  104 (257)
                      +++......|.+.. ..+.+++.|+++.+ +....+.++.|+++++++++++|||++++++.+++++++|++++..+|.+
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            44455556676654 88999999999999 68889999999999999999999999999999999999999999888765


Q ss_pred             c
Q 038856          105 F  105 (257)
Q Consensus       105 ~  105 (257)
                      .
T Consensus       111 ~  111 (113)
T PF13536_consen  111 G  111 (113)
T ss_pred             c
Confidence            3

>TIGR00688 rarD rarD protein

Probab=99.01  E-value=2.4e-08  Score=83.98  Aligned_cols=140  Identities=12%  Similarity=0.143  Sum_probs=105.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhh-hcCCCCCchhHHHHHHHHHH
Q 038856          108 YGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVT-MNFPLLFYPGFQVVMLLSCI  186 (257)
Q Consensus       108 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~  186 (257)
                      .|..+.++++++++...+..|.. .  +.++.++.++..+++.+.+.++....++.... ...+.....+.+..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            48889999999999999999873 3  48999999999999888776665443332110 01111011122444566666


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          187 MAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       187 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      +........+++++++++..++++.+..|++++++++++++| +++..+++|..+.++|+.+...
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~E-k~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKE-RISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            644444555889999999999999999999999999999996 9999999999999999886543

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.93  E-value=6.7e-08  Score=82.51  Aligned_cols=134  Identities=10%  Similarity=0.092  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHH
Q 038856          110 YAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAF  189 (257)
Q Consensus       110 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  189 (257)
                      ..+.+++++++|...+.+|+..++  .++.  ..+.+..+.+.+.|+.......   .+.+. .+...+..++..++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQ---VGWSR-LPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhccc---CCCCC-cchhhHHHHHHHHHHHH
Confidence            467899999999999999987663  2333  3555556666666665432110   01111 12333555666666666


Q ss_pred             HHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhh
Q 038856          190 LINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYC  252 (257)
Q Consensus       190 ~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~  252 (257)
                      ...++.+.+.++.++...+.+.+..|+++.+++++++|| +++..+++|..+++.|+++....
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e-~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGE-TLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHhcc
Confidence            666666889999999999999999999999999999996 99999999999999999876543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.74  E-value=2.5e-08  Score=73.90  Aligned_cols=79  Identities=20%  Similarity=0.288  Sum_probs=71.3

Q ss_pred             CCCcChhHHHHHhHHHHH-HHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhh
Q 038856           20 TTLVPLKTLVHTLPLALS-YLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLA   98 (257)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~   98 (257)
                      .++.+.+++......+.+ ....+.+.+.++++++++..+.+.++.|+++.+++++++||+++++++.++.+++.|++++
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   45 FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            355666777777888877 5889999999999999999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.69  E-value=1.1e-06  Score=77.42  Aligned_cols=138  Identities=11%  Similarity=0.157  Sum_probs=107.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHH
Q 038856          108 YGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIM  187 (257)
Q Consensus       108 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  187 (257)
                      .-+..++..-++|+.+.++.|...+. +.++....++-..++.+.+.|+....++..   ..+ ..+...+..+...|++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~-~~~~~~~~~l~l~g~~   87 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLP-PLSVSILSKIGLLGFL   87 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccC-cchHHHHHHHHHHHHH
Confidence            34566777788999999999988744 789999999999888888888876532210   011 1123345666777777


Q ss_pred             HHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHh------cCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          188 AFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLL------FGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       188 ~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~------f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      +...+...+.++++++|..++++.+..|+++.++++++      ++| +++..+++|.++.++|+.+...
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~e-r~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKE-RSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcc-cccHHHHHHHHHHHHHHHHHHH
Confidence            74344455889999999999999999999999999999      685 9999999999999999987654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.68  E-value=1.1e-06  Score=65.97  Aligned_cols=124  Identities=12%  Similarity=0.032  Sum_probs=88.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHH
Q 038856          108 YGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIM  187 (257)
Q Consensus       108 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  187 (257)
                      .|+.+.+.+.++.+..++..|+-.++.+  ..+.... .    ..... ..              .++   ...++.|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g--~~~~~~~-~----~~~~~-~~--------------~~p---~~~i~lgl~   56 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP--LLSHAWD-F----IAALL-AF--------------GLA---LRAVLLGLA   56 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC--CccchhH-H----HHHHH-HH--------------hcc---HHHHHHHHH
Confidence            4788999999999999999998665432  1111110 0    00000 00              111   124566666


Q ss_pred             HHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHH--hcCCcCcchhhhhHHHHHHHHHHHHHhhhhcCC
Q 038856          188 AFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWL--LFGGLPFDLFNIVGQALGFLGSCFYAYCKLQGK  257 (257)
Q Consensus       188 ~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~--~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~~~  257 (257)
                      +...++.. ..++++.+...+.......++...+.++.  +||| ++|+.+++|..++++|+++.++.++++|
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E-~ls~~~~iGi~lIi~GV~lv~~~~~~~~  128 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE-TFSLKKTLGVACIMLGVWLINLPTTKAR  128 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            66666665 78899999999988888888888888875  7996 9999999999999999999998877664

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.57  E-value=5.8e-07  Score=65.74  Aligned_cols=64  Identities=14%  Similarity=0.121  Sum_probs=59.5

Q ss_pred             HHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhc
Q 038856           36 LSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAG   99 (257)
Q Consensus        36 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~   99 (257)
                      +.+....++...+++.+|++.+..+-++.++++.+.+++++|||+++++++++.++++|++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4467788899999999999999999999999999999999999999999999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.55  E-value=8.6e-07  Score=76.17  Aligned_cols=214  Identities=15%  Similarity=0.140  Sum_probs=119.4

Q ss_pred             HHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcc--ccc-c-cc-----
Q 038856           36 LSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGA--RDL-S-FD-----  106 (257)
Q Consensus        36 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~--~~~-~-~~-----  106 (257)
                      +++.....+++.|+.+.|.+..+-+....-++.++++..++|||++++++.|+.+++.|+.+...  ++. + .+     
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~  137 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI  137 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence            45677788999999999999999999999999999999999999999999999999999976532  111 0 10     


Q ss_pred             -------hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHH---H-HHhcCchhhhhcCCCCCch
Q 038856          107 -------AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLF---W-TSFRGDLEVTMNFPLLFYP  175 (257)
Q Consensus       107 -------~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~---~-~~~~~~~~~~~~~~~~~~~  175 (257)
                             ...+........+.-.+.. .+|..+   .+..--....++.+....+.   . ..+.+...   ......++
T Consensus       138 ~~~~~~~fl~y~~~~~~~~~~L~~~~-~~r~g~---~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~---g~~~f~~~  210 (300)
T PF05653_consen  138 ALLSQPGFLVYFILVLVLILILIFFI-KPRYGR---RNILVYISICSLIGSFTVLSAKAISILIKLTFS---GDNQFTYP  210 (300)
T ss_pred             HHhcCcceehhHHHHHHHHHHHHHhh-cchhcc---cceEEEEEEeccccchhhhHHHHHHHHHHHHhc---Cchhhhhh
Confidence                   1112112211111111111 112111   11110000111111110000   0 01111110   01112344


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhH-hHHHHHHHHHHHhcCCc-Ccch----hhhhHHHHHHHHHHHH
Q 038856          176 GFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGN-LKDLLTIGLGWLLFGGL-PFDL----FNIVGQALGFLGSCFY  249 (257)
Q Consensus       176 ~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~-~~~i~~~~~~~~~f~e~-~~t~----~~~~G~~li~~g~~~~  249 (257)
                      ..|..++....++..--+..+.++++.++.......+ .-...+++-|.++|+|. ..++    ....|..+++.|+.+-
T Consensus       211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL  290 (300)
T PF05653_consen  211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL  290 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence            4455544444444444445588888876554333222 33456777788889852 3444    4567888899999988


Q ss_pred             HhhhhcC
Q 038856          250 AYCKLQG  256 (257)
Q Consensus       250 ~~~k~~~  256 (257)
                      +..|..|
T Consensus       291 ~~~~~~~  297 (300)
T PF05653_consen  291 SSSKDKE  297 (300)
T ss_pred             eccCchh
Confidence            7776554

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.48  E-value=1.4e-07  Score=69.00  Aligned_cols=77  Identities=22%  Similarity=0.330  Sum_probs=72.0

Q ss_pred             cChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhc
Q 038856           23 VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAG   99 (257)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~   99 (257)
                      ++.|.+......|+....++.+++.|++.-+++...-+..+.|+++.+++++++|||++..+|+++.++.+|++++.
T Consensus        62 ~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          62 IGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             cCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            57777888888898899999999999999999999999999999999999999999999999999999999998754

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.44  E-value=6.6e-06  Score=60.37  Aligned_cols=106  Identities=19%  Similarity=0.245  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHH
Q 038856          145 NGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGW  223 (257)
Q Consensus       145 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~  223 (257)
                      ....+.+.+.......++..+......  + ..+...+..|+++...++.. +++.++.++ ..+....+.|+++.++|.
T Consensus         4 r~~~~~l~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    4 RYLFSVLFLLIILLIRGRLRDLFRALR--R-KPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHccHHHHHHHHH--h-CcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence            344555555555555444432211111  1 11334555566555444444 788888885 777889999999999999


Q ss_pred             HhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          224 LLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       224 ~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      ++++| +++..+++|.+++++|+++..+.+.+
T Consensus        80 ~~~~e-r~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   80 LFFKE-RLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHhcC-CCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99996 99999999999999999999887654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.41  E-value=2.4e-05  Score=67.14  Aligned_cols=129  Identities=16%  Similarity=0.109  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHH
Q 038856          111 AVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFL  190 (257)
Q Consensus       111 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  190 (257)
                      ...+.-.+.|+...+..|...+  +.+|.+..++....+.+.+.++.....+     .   ..+.+.+......|.+...
T Consensus        11 ~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~-----~---~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272         11 GALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGH-----P---LPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCC-----C---CCcHHHHHHHHHHHHHHHH
Confidence            3455666889999999998776  6899999999999888887776543221     1   1122334445556655433


Q ss_pred             H-HHHHHHHh-hccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          191 I-NYYVFLNT-ILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       191 ~-~~~~~~~i-~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      . ....+.+. ++.++...+++.+..|+++.+++.+ +|| +++..+++|..+.++|+.+...
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e-~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGI-RTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcc-cCchhHHHHHHHHHHhHHHHhc
Confidence            3 23335666 8889999999999999999999985 786 9999999999999999887654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.34  E-value=4.2e-05  Score=67.43  Aligned_cols=126  Identities=10%  Similarity=0.083  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHhcccCCCC-hhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCC-chhHHHHHHHHHHHHHHHHHHH
Q 038856          118 ICTAAYLAFISRIGRSSGLS-SFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLF-YPGFQVVMLLSCIMAFLINYYV  195 (257)
Q Consensus       118 ~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~  195 (257)
                      .+...+++..|...++  .+ |+.+..++.+.+.+.+...... + ..   ..+... ....+..++..|+++....+..
T Consensus        59 ~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~-~~---~~~~~~~~~~~~~~llp~gl~~~~~~~~~  131 (350)
T PTZ00343         59 ALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-G-FR---KIPRIKSLKLFLKNFLPQGLCHLFVHFGA  131 (350)
T ss_pred             HHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-C-CC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445567788888874  56 9999999998887665444221 1 10   111111 1234566777888777665556


Q ss_pred             HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          196 FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       196 ~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      +.+++.+++..++++...+|+++++++.++++| +++..++.|.+++++|+.+...
T Consensus       132 ~~sl~~~svs~~~iika~~Pvft~lls~~~l~e-k~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        132 VISMGLGAVSFTHVVKAAEPVFTALLSILFLKQ-FLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHheec
Confidence            788999999999999999999999999999996 9999999999999999997654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.32  E-value=1.5e-05  Score=66.99  Aligned_cols=115  Identities=15%  Similarity=0.054  Sum_probs=85.7

Q ss_pred             HHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHHH-HHHHHhhc
Q 038856          123 YLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINY-YVFLNTIL  201 (257)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~i~~  201 (257)
                      ..+..|...++ ..++....++..+.+.+.+.+.....         +   +...+......+.++....+ ..+.++++
T Consensus         4 ~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~---------~---~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         4 TGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR---------P---PLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             hHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc---------c---CHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34455665543 57888999999888887777654321         1   11223344455555444444 44789999


Q ss_pred             cchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          202 NSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       202 ~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      +++...+++....|+++.+++.+++|| +++..++.|..+.++|+.+...
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e-~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKE-RPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccC-CCcHHHHHHHHHHHHhHHhhcc
Confidence            999999999999999999999999996 9999999999999999988654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.32  E-value=3.5e-05  Score=66.39  Aligned_cols=124  Identities=13%  Similarity=0.103  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHH
Q 038856          111 AVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFL  190 (257)
Q Consensus       111 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  190 (257)
                      ...+.++++|+...+..|...+  +.+|.+..++...++.+.+.+...  .+        . .+   +..+...|+....
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~--~~--------~-~~---~~~~~~~g~~~~~   70 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVA--RP--------K-VP---LNLLLGYGLTISF   70 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhc--CC--------C-Cc---hHHHHHHHHHHHH
Confidence            5578889999999999988776  689999999988776655544321  10        0 01   1122233443333


Q ss_pred             HHHH-HHHHhhc-cchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          191 INYY-VFLNTIL-NSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       191 ~~~~-~~~~i~~-~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      ..+. .+.+.++ .++...+++.+..|+++.++++++++| +++..+++|..+.++|+.+...
T Consensus        71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e-~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGE-RLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcC-cCcHHHHHHHHHHHHhHHHhcc
Confidence            3332 2566776 577889999999999999999999996 9999999999999999887764

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.29  E-value=3.6e-05  Score=64.45  Aligned_cols=141  Identities=13%  Similarity=0.174  Sum_probs=110.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHH
Q 038856          106 DAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSC  185 (257)
Q Consensus       106 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  185 (257)
                      +..|.+.++.+-+.+++.-.+.|-+.   +.++.++..+-.+.+.++.........+.....+  ...++..+......+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~a   79 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALTA   79 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHHH
Confidence            45799999999999999888876553   5788999999999888888777666665554433  223555455555555


Q ss_pred             HHHHHHHHHH-HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          186 IMAFLINYYV-FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       186 ~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      .. ...|... .|+..+-....+|.--+++|.+.+++|.++++| +++..|++...+..+|+..-.+..
T Consensus        80 ~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkE-rls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          80 LL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKE-RLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc
Confidence            44 2335555 688999999999999999999999999999996 999999999999999998766543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.27  E-value=5.4e-05  Score=65.23  Aligned_cols=123  Identities=7%  Similarity=-0.049  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 038856          120 TAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNT  199 (257)
Q Consensus       120 ~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i  199 (257)
                      ...+++++|+..++. ..|..+.+++...+.+.+.+.-. .+..    ..+ ..+.+.+..++..|++........+.++
T Consensus        14 ~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~~----~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~l   86 (302)
T TIGR00817        14 NVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGLP----KRL-KISSALLKLLLPVAIVHTIGHVTSNVSL   86 (302)
T ss_pred             HHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCCC----CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334556778877642 45888888887777665544311 1111    111 1234456667777777644444558999


Q ss_pred             hccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHH
Q 038856          200 ILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYA  250 (257)
Q Consensus       200 ~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~  250 (257)
                      +++++..++++....|+++.++++++++| +++..++.|.+++++|+.+..
T Consensus        87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e-~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQ-EFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HhccHHHHHHHHhcchHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999996 999999999999999998654

specificities overlap.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.26  E-value=4.8e-05  Score=65.41  Aligned_cols=130  Identities=16%  Similarity=0.113  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHH
Q 038856          108 YGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIM  187 (257)
Q Consensus       108 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  187 (257)
                      .++..++.++++|+...+..|...+  +.+|....++-...+.+++.++..   ..    ..+. ..   +..++..++.
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~~---~~----~~~~-~~---~~~~~~~~l~   70 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTVG---FP----RLRQ-FP---KRYLLAGGLL   70 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHcc---cc----cccc-cc---HHHHHHHhHH
Confidence            4567889999999999999998777  688999988888777777665421   11    1111 11   1122233332


Q ss_pred             HHHHHHHHHHHh----hccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          188 AFLINYYVFLNT----ILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       188 ~~~~~~~~~~~i----~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      ........+.+.    +..++...+++.+..|+++.++++++++| +++..+++|..+.++|+++...
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e-~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQ-KANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcC-CccHHHHHHHHHHHHhHhheec
Confidence            222222223344    45678888999999999999999999996 9999999999999999887653

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.09  E-value=0.003  Score=55.20  Aligned_cols=227  Identities=12%  Similarity=0.081  Sum_probs=134.3

Q ss_pred             cChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHH-HHHHHHHHHHHHHHHHhCccc---Cc----chhHHHHHHHhh
Q 038856           23 VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTT-LRRTTVAFTMIVEYLLTGQKH---SL----PVVGSVGIILLG   94 (257)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-~~~~~pv~~~i~~~l~~~e~~---~~----~~~~~~~~~~~G   94 (257)
                      .+.+.+..-+..|++....+..+..+++++.++...- ...++.+...+...++++|..   +.    .-..+++++++|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            3455666777788888999999999999999997554 445778888888899988765   32    244677788899


Q ss_pred             hhhhcc----ccc--------cc-chhhHHHHHHHHHHHHHHH-------HHHHHhcccCCCChhhHHHHHHH---HHHH
Q 038856           95 AFLAGA----RDL--------SF-DAYGYAVVFIANICTAAYL-------AFISRIGRSSGLSSFGLMWCNGI---ICTP  151 (257)
Q Consensus        95 v~~~~~----~~~--------~~-~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~l---~~~~  151 (257)
                      +++...    .|.        +. ...|..+++++.+.++.|.       ...+.. .+.+.++.....-+..   .+..
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGA  226 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHH
Confidence            988755    222        11 2479999999999999999       333322 1234555544433332   2222


Q ss_pred             HHHH-HHHh---c-CchhhhhcCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHhhccchh----HHHHHhHhHHHHHHH
Q 038856          152 ILLF-WTSF---R-GDLEVTMNFPLLFY--PGFQVVMLLSCIMAFLINYYVFLNTILNSAL----TQTICGNLKDLLTIG  220 (257)
Q Consensus       152 ~l~~-~~~~---~-~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~----~~s~~~~~~~i~~~~  220 (257)
                      ..-. +-..   . ++.+...++.....  ....+.-.+.|+.-...++....+-++.+..    ...+...+.-+++.+
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            2211 1110   1 11110011110000  1222333455554444333334444444222    222444566688889


Q ss_pred             HHHHhcCCcCcc------hhhhhHHHHHHHHHHHHHhh
Q 038856          221 LGWLLFGGLPFD------LFNIVGQALGFLGSCFYAYC  252 (257)
Q Consensus       221 ~~~~~f~e~~~t------~~~~~G~~li~~g~~~~~~~  252 (257)
                      .|++ +|| .=+      ...++|.++++.|..+....
T Consensus       307 wGi~-lkE-~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        307 WGLV-LKE-WKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhhh-hhh-ccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            9984 886 545      67799999999998887654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.99  E-value=3.8e-05  Score=57.62  Aligned_cols=71  Identities=24%  Similarity=0.281  Sum_probs=62.4

Q ss_pred             HhHHH-HHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHH--HhCcccCcchhHHHHHHHhhhhhhccc
Q 038856           31 TLPLA-LSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYL--LTGQKHSLPVVGSVGIILLGAFLAGAR  101 (257)
Q Consensus        31 ~~~~~-~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l--~~~e~~~~~~~~~~~~~~~Gv~~~~~~  101 (257)
                      ++..| +++....++++.+++..|++.+.-..+..++.+.+.++.  ++||++++.++.+++++++|+.++..+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            45556 456889999999999999999999999999999888885  799999999999999999999987543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.97  E-value=0.00018  Score=61.69  Aligned_cols=132  Identities=14%  Similarity=0.088  Sum_probs=92.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHH
Q 038856          109 GYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMA  188 (257)
Q Consensus       109 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  188 (257)
                      |..++++++++|+...+..|+..   +.++.+..  ...++...+........+       +....+..+..-..+|+.-
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~-------~~~~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVL-------PEFWALSIFLVGLLSGAFW   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhC-------CcccccHHHHHHHHHHHHH
Confidence            57889999999999999998764   34444443  233344444333322221       1112244445455666655


Q ss_pred             HHHHHHHHHHhhccchhHHHHHhH-hHHHHHHHHHHHhcCCcCcchhh----hhHHHHHHHHHHHHHhhh
Q 038856          189 FLINYYVFLNTILNSALTQTICGN-LKDLLTIGLGWLLFGGLPFDLFN----IVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       189 ~~~~~~~~~~i~~~~~~~~s~~~~-~~~i~~~~~~~~~f~e~~~t~~~----~~G~~li~~g~~~~~~~k  253 (257)
                      ...|+..+.++|+.+....-.+.+ +.++...+.+.++||| +.+..+    ++|.+++++|.++....|
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e-~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGE-WSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            555677788999988888866666 8888999999999996 999999    999999999999876654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.95  E-value=0.00011  Score=53.63  Aligned_cols=55  Identities=13%  Similarity=-0.080  Sum_probs=50.1

Q ss_pred             HHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHh
Q 038856          196 FLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       196 ~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~  251 (257)
                      ..++++.+...+...-.+.++.+.++|+++||| ++|+.+++|..++++|+++...
T Consensus        55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E-~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHE-PVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhc
Confidence            678899999888888889999999999999996 9999999999999999987654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.95  E-value=0.00034  Score=60.40  Aligned_cols=125  Identities=14%  Similarity=0.062  Sum_probs=89.3

Q ss_pred             HHHHHHHHHhcccCCCC--hhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 038856          121 AAYLAFISRIGRSSGLS--SFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLN  198 (257)
Q Consensus       121 a~~~v~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  198 (257)
                      ..+.+.++++.++...+  +..+++.|...+.+...+.......     + +....+  +.-....+++-.......+.+
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~-~~~~~~--~~~~~~~~~~~~~~~~~~~~a   84 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-----P-KSRKIP--LKKYAILSFLFFLASVLSNAA   84 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-----c-CCCcCh--HHHHHHHHHHHHHHHHHHHHH
Confidence            34667778877654445  7778888887777666655443330     0 111111  222233344444445566889


Q ss_pred             hhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          199 TILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       199 i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                      +++.+..+..+....+++++++++.+++|+ +.+..++++..++.+|+.++...+.
T Consensus        85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k-~y~~~~~~~v~li~~Gv~~~~~~~~  139 (303)
T PF08449_consen   85 LKYISYPTQIVFKSSKPIPVMILGVLILGK-RYSRRQYLSVLLITIGVAIFTLSDS  139 (303)
T ss_pred             HHhCChHHHHHHhhhHHHHHHHHHHHhcCc-cccHHHHHHHHHHHhhHheeeeccc
Confidence            999999999999999999999999999995 9999999999999999999887654

; GO: 0055085 transmembrane transport

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.88  E-value=5.8e-05  Score=64.01  Aligned_cols=216  Identities=16%  Similarity=0.060  Sum_probs=121.8

Q ss_pred             hHHH-HHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccccccc-----
Q 038856           32 LPLA-LSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSF-----  105 (257)
Q Consensus        32 ~~~~-~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~~-----  105 (257)
                      ...| +.+...-..++.|..+-|.+..+-+.++..+..++++..++|||+++...+|+.++++|..++....++.     
T Consensus        67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t  146 (335)
T KOG2922|consen   67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIES  146 (335)
T ss_pred             HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccccc
Confidence            3445 4467889999999999999999999999999999999999999999999999999999998774332210     


Q ss_pred             ---------c--hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHH--HhcCchh--hhhcCC
Q 038856          106 ---------D--AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWT--SFRGDLE--VTMNFP  170 (257)
Q Consensus       106 ---------~--~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~--~~~~~~~--~~~~~~  170 (257)
                               +  ..-+...+.-.++.=.+  +.|.  ++.+.+.   +-|..+.+.+...-.+  -..++.-  .....+
T Consensus       147 ~~el~~~~~~~~Fliy~~~iil~~~il~~--~~~p--~~g~tni---lvyi~i~s~iGS~tV~svKalg~aiklt~~g~~  219 (335)
T KOG2922|consen  147 VEEVWELATEPGFLVYVIIIILIVLILIF--FYAP--RYGQTNI---LVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN  219 (335)
T ss_pred             HHHHHHHhcCccHHHHHHHHHHHHHHHhe--eecc--cccccce---eehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence                     1  11111111111111111  1121  1111222   3343333332211000  0000000  001112


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhH-hHHHHHHHHHHHhcCCc-Ccc----hhhhhHHHHHHH
Q 038856          171 LLFYPGFQVVMLLSCIMAFLINYYVFLNTILNSALTQTICGN-LKDLLTIGLGWLLFGGL-PFD----LFNIVGQALGFL  244 (257)
Q Consensus       171 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~-~~~i~~~~~~~~~f~e~-~~t----~~~~~G~~li~~  244 (257)
                      +...+..|..++....+...--...+.+++..++...+...+ +-+.++++.|.+.|+|- ..+    .....|...++.
T Consensus       220 ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~  299 (335)
T KOG2922|consen  220 QLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFL  299 (335)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhh
Confidence            223344444444443333332233477888766555544444 44567788888888752 223    445677888888


Q ss_pred             HHHHHHhhhh
Q 038856          245 GSCFYAYCKL  254 (257)
Q Consensus       245 g~~~~~~~k~  254 (257)
                      |+.+-...|.
T Consensus       300 G~flL~~~kd  309 (335)
T KOG2922|consen  300 GIFLLHRTKD  309 (335)
T ss_pred             eeeEeeeecc
Confidence            8877765553

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.87  E-value=0.0011  Score=56.09  Aligned_cols=140  Identities=17%  Similarity=0.136  Sum_probs=92.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHH
Q 038856          107 AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCI  186 (257)
Q Consensus       107 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  186 (257)
                      ..+....+.....++......|+..+. ..+.....++......+...+...... .    .......+  +......+.
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~--~~~~~~~~~   77 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEP-R----GLRPALRP--WLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhc-c----cccccccc--hHHHHHHHH
Confidence            356777778888888888888877653 244555555565555554333222110 0    00110111  223333344


Q ss_pred             HHHHH-HHHHHHHhhccchhHHHHHhHhHHHHHHHHHH-HhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          187 MAFLI-NYYVFLNTILNSALTQTICGNLKDLLTIGLGW-LLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       187 ~~~~~-~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~-~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      +.... .+..+.+++++++...+...+..|++..+++. ++++| +++..++.|..+.+.|+++..+....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGE-RLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHhHHheecCCCc
Confidence            33333 34447789999999999999999999999997 66686 99999999999999999988776543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.85  E-value=9.2e-05  Score=54.65  Aligned_cols=70  Identities=17%  Similarity=0.192  Sum_probs=61.6

Q ss_pred             HhHHHHHHHHHHHHhhhhhccccchHHHHHH-HHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcc
Q 038856           31 TLPLALSYLLYMLITMEAVRGINVPMYTTLR-RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGA  100 (257)
Q Consensus        31 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~-~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~  100 (257)
                      ....-+++..+.++...+++++|++.+..+- ....+.+.+.+.+++||++++.++.++.++++|++.+-.
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            3445567788999999999999999988774 689999999999999999999999999999999988743

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.76  E-value=0.00016  Score=62.17  Aligned_cols=74  Identities=18%  Similarity=0.183  Sum_probs=63.4

Q ss_pred             hHHHHHhHHHHHH-HHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhc
Q 038856           26 KTLVHTLPLALSY-LLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAG   99 (257)
Q Consensus        26 ~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~   99 (257)
                      ..+...+..++.. .....+++.++++++++.++...++.|++..++++++++|++++.++++..+++.|+....
T Consensus       206 ~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        206 SILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            3333344556554 5677789999999999999999999999999999999999999999999999999998764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.76  E-value=0.0023  Score=48.66  Aligned_cols=131  Identities=21%  Similarity=0.206  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHH
Q 038856          110 YAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAF  189 (257)
Q Consensus       110 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  189 (257)
                      ..+++.+-.+.+.....+.++.++.+ |++.-.+.+...+.+.+.......++.    +.....+..+|  ....|+++.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~----~~~~~~~~p~w--~~lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP----SLASLSSVPWW--AYLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc----ccchhccCChH--HhccHHHHH
Confidence            45677777888888888888876433 588888888888888887776666553    11111222223  334888888


Q ss_pred             HHHHHHHHHhhccchhHHHHHhHhHHHHH-HHHHHH-hcC--CcCcchhhhhHHHHHHHHHH
Q 038856          190 LINYYVFLNTILNSALTQTICGNLKDLLT-IGLGWL-LFG--GLPFDLFNIVGQALGFLGSC  247 (257)
Q Consensus       190 ~~~~~~~~~i~~~~~~~~s~~~~~~~i~~-~~~~~~-~f~--e~~~t~~~~~G~~li~~g~~  247 (257)
                      ..-++....+++.++...........+.+ .+++.+ +|+  .+++++.+++|.+++++|++
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            87777788899999999888777666555 444443 232  13789999999999999986

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.75  E-value=0.00099  Score=58.03  Aligned_cols=140  Identities=12%  Similarity=0.173  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCCC-hhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHH
Q 038856          108 YGYAVVFIANICTAAYLAFISRIGRSSGLS-SFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCI  186 (257)
Q Consensus       108 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  186 (257)
                      .+.+++=.-++|-+..++....+.++ +.+ |....+++.........+........+.   +.......+|..++ .++
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~---~~~~~~~~~w~y~l-la~   87 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKK---WLKVLKRPWWKYFL-LAL   87 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcccccc---chhhcchhHHHHHH-HHH
Confidence            34455555555555566665555544 333 5555566665444444444333221111   00001122344444 467


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          187 MAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       187 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      +=...+|....+.++++.+.++++.....+++.+++++++++ ++++.+++|+.++++|+.+....+
T Consensus        88 ~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~-ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   88 LDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKR-RYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhheeeec
Confidence            777889999999999999999999999999999999999996 999999999999999988766554

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.68  E-value=0.00029  Score=51.29  Aligned_cols=66  Identities=12%  Similarity=0.234  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHhhhhhccccchHHHHHH-HHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcc
Q 038856           35 ALSYLLYMLITMEAVRGINVPMYTTLR-RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGA  100 (257)
Q Consensus        35 ~~~~~~~~~~~~~al~~~~~~~~~~~~-~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~  100 (257)
                      -+.+..+.++...+++.+|++.+...- ....+.+.+.+++++||++++.++.++.++++|++.+..
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            455677888888999999999988774 478999999999999999999999999999999998743

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.63  E-value=0.00038  Score=50.48  Aligned_cols=66  Identities=20%  Similarity=0.204  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHhhhhhccccchHHHHHH-HHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhh
Q 038856           33 PLALSYLLYMLITMEAVRGINVPMYTTLR-RTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLA   98 (257)
Q Consensus        33 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~-~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~   98 (257)
                      ..-+.+..+.++-..++|.+|++.+...- ....+.+.+.+.+++||++++.++.++.+++.|++.+
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            33455677888888999999999966554 4788999999999999999999999999999999874

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.63  E-value=0.00041  Score=50.03  Aligned_cols=66  Identities=15%  Similarity=0.110  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHhhhhhccccchHHHHHHH-HHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhh
Q 038856           33 PLALSYLLYMLITMEAVRGINVPMYTTLRR-TTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLA   98 (257)
Q Consensus        33 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~-~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~   98 (257)
                      ..-+.+..+.++-..+++.+|++.+...-. ...+.+.+.+.+++||++++.++.++.+.+.|++.+
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            334566778888889999999999665555 889999999999999999999999999999999875

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.62  E-value=0.00037  Score=49.91  Aligned_cols=67  Identities=21%  Similarity=0.169  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHhhhhhccccchHHH-HHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhc
Q 038856           33 PLALSYLLYMLITMEAVRGINVPMYT-TLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAG   99 (257)
Q Consensus        33 ~~~~~~~~~~~~~~~al~~~~~~~~~-~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~   99 (257)
                      ..-+.+..+..+-..|++.+|++.+. +-.....+.+.+.+++++||+.++.++.++.+.++|++.+-
T Consensus        35 l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          35 LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            33455677788888999999999855 45567889999999999999999999999999999998753

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.49  E-value=1.6e-05  Score=64.83  Aligned_cols=215  Identities=13%  Similarity=0.159  Sum_probs=142.7

Q ss_pred             ChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHH-HHHHHHHHHHHHHHHhCcccCcchh----HHHHHHHhhhhhh
Q 038856           24 PLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTL-RRTTVAFTMIVEYLLTGQKHSLPVV----GSVGIILLGAFLA   98 (257)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~-~~~~pv~~~i~~~l~~~e~~~~~~~----~~~~~~~~Gv~~~   98 (257)
                      +.+.+..-+..|++....+...+.|++++.++.+.=+ ..++-+-+.+++.+.+||+.+..+.    .++++.+.|+.+.
T Consensus        55 T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lT  134 (288)
T COG4975          55 TLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLT  134 (288)
T ss_pred             chhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEe
Confidence            4455556666778888899999999999999876543 3467788899999999999888776    5677788888887


Q ss_pred             ccccc---c-----cchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCC
Q 038856           99 GARDL---S-----FDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFP  170 (257)
Q Consensus        99 ~~~~~---~-----~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~  170 (257)
                      ...|.   +     .--.|....+.+.+.|-.|.+..+..    +.|.++...-|+.-..+.-+.+....+|.       
T Consensus       135 s~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~-------  203 (288)
T COG4975         135 SKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEK-------  203 (288)
T ss_pred             eeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhccccc-------
Confidence            66543   1     11358888999999999999887643    46666666655543222222222222111       


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHhhccc-hhHHHHHhHhHHHHHHHHHHHhcCCcCcchhh----hhHHHHHHHH
Q 038856          171 LLFYPGFQVVMLLSCIMAFLINYYVFLNTILNS-ALTQTICGNLKDLLTIGLGWLLFGGLPFDLFN----IVGQALGFLG  245 (257)
Q Consensus       171 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~-~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~----~~G~~li~~g  245 (257)
                        ........-...|+.-...|...+.+-++.+ ++.+|. ..+.-+.+.+-|+++++| +=|..+    +.|.+++++|
T Consensus       204 --~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSl-SQlgViisTiGGIl~L~e-kKtkkEm~~v~iGiilivvg  279 (288)
T COG4975         204 --RFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSL-SQLGVIISTIGGILFLGE-KKTKKEMVYVIIGIILIVVG  279 (288)
T ss_pred             --chHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeH-hhheeeeeecceEEEEec-cCchhhhhhhhhhHHHHHHH
Confidence              1112234456667666666776655555443 333333 445568888999999996 777665    4677888888


Q ss_pred             HHHHHhhh
Q 038856          246 SCFYAYCK  253 (257)
Q Consensus       246 ~~~~~~~k  253 (257)
                      ..+....|
T Consensus       280 ai~lg~~K  287 (288)
T COG4975         280 AILLGIAK  287 (288)
T ss_pred             hhhhheec
Confidence            77665544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.49  E-value=0.00054  Score=52.64  Aligned_cols=72  Identities=14%  Similarity=0.223  Sum_probs=65.7

Q ss_pred             hHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhh
Q 038856           26 KTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFL   97 (257)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~   97 (257)
                      +.+...+..+++....+.+.+..++++++-+++++.....+.+.+.++++++|+++..++.|+++++.|+..
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            445566666777889999999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.30  E-value=0.0029  Score=46.05  Aligned_cols=57  Identities=21%  Similarity=0.238  Sum_probs=45.9

Q ss_pred             HHHhhccch-hHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          196 FLNTILNSA-LTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       196 ~~~i~~~~~-~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      ..++|+.+. .-+++..-+..+.+++.|+++||| ++|+.+++|+.++++|++.-+..+
T Consensus        48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e-~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCC
Confidence            456666543 334555667888899999999996 999999999999999999987654

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.20  E-value=0.0017  Score=45.77  Aligned_cols=56  Identities=16%  Similarity=0.215  Sum_probs=34.7

Q ss_pred             HHHHHHHHHhhhhhccccchHHHHH-HHHHHHHHHHHHHHHhCcccCcchhHHHHHH
Q 038856           36 LSYLLYMLITMEAVRGINVPMYTTL-RRTTVAFTMIVEYLLTGQKHSLPVVGSVGII   91 (257)
Q Consensus        36 ~~~~~~~~~~~~al~~~~~~~~~~~-~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~   91 (257)
                      ..+..+.++...+++++|++.+... .....+.+.+.+.+++||++++.++.++.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            4678888999999999999997655 5699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.16  E-value=0.0048  Score=44.21  Aligned_cols=57  Identities=23%  Similarity=0.207  Sum_probs=48.2

Q ss_pred             HHHhhccc-hhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          196 FLNTILNS-ALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       196 ~~~i~~~~-~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      ..++|+.+ .+-+++..-+..+.+++.|+++||| ++++.+++|..++++|++.-+..+
T Consensus        48 s~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E-~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          48 SLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE-SLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC-cCCHHHHHHHHHHHHHHHHhhhcC
Confidence            56777765 3456788888999999999999996 999999999999999999876543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.11  E-value=0.0025  Score=53.23  Aligned_cols=76  Identities=13%  Similarity=0.071  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          178 QVVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       178 ~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                      ...+...+++-..-+...+.++++.+|.++++....|.+.+.++++++++. +++..||++..+.+.|+.+.+....
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r-~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKR-RLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHc-ccchhhHHHHHHHHHHHheeecCCc
Confidence            445566666666667777899999999999999999999999999999995 9999999999999999998776543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.05  E-value=0.013  Score=51.34  Aligned_cols=137  Identities=12%  Similarity=0.082  Sum_probs=88.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHH--HHHHHHHHHHH--HHhcCchhhhhcCCCCCchhHHHHHH
Q 038856          107 AYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCN--GIICTPILLFW--TSFRGDLEVTMNFPLLFYPGFQVVML  182 (257)
Q Consensus       107 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~--~l~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~  182 (257)
                      ..|+.+.+++++|++-..+-+|| .++   -+|+.. |-  .+++.+++...  .+..++.   .++-...++..+..-.
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f---~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WSVGGIFSWLILPWLIAALLLPDF---WAYYSSFSGSTLLPVF   77 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HHHHHHHHHHHHHHHHHHHHhhhH---HHHHHhcCHHHHHHHH
Confidence            46999999999999999888887 342   344443 32  22333333211  1111121   1222224566667777


Q ss_pred             HHHHHHHHHHHHHHHHhhccchh-HHHHHhHhHHHHHHHHHHHhcCCcC------cchhhhhHHHHHHHHHHHHHh
Q 038856          183 LSCIMAFLINYYVFLNTILNSAL-TQTICGNLKDLLTIGLGWLLFGGLP------FDLFNIVGQALGFLGSCFYAY  251 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~i~~~~~~-~~s~~~~~~~i~~~~~~~~~f~e~~------~t~~~~~G~~li~~g~~~~~~  251 (257)
                      ++|++-...|...+..+|+.+-. ...+..-+.-+..++++.+++||-+      -.....+|.+++++|+.+.++
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            78887777777777888876544 3444455777888999999998511      124578899999999999998

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.97  E-value=0.008  Score=44.39  Aligned_cols=57  Identities=14%  Similarity=0.089  Sum_probs=45.4

Q ss_pred             HHHhhccchh-HHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          196 FLNTILNSAL-TQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       196 ~~~i~~~~~~-~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      ..++|+.+.. -+++..-+..+.+++.|+++||| ++|+.+++|+.++++|++.-+...
T Consensus        48 s~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E-~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         48 SFAVKKIALGVAYALWEGIGILFITLFSVLLFDE-SLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHhhcCC
Confidence            4566665433 34555567888999999999996 999999999999999999887644

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.91  E-value=0.01  Score=42.77  Aligned_cols=56  Identities=11%  Similarity=-0.014  Sum_probs=46.8

Q ss_pred             HHHhhccc-hhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhh
Q 038856          196 FLNTILNS-ALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYC  252 (257)
Q Consensus       196 ~~~i~~~~-~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~  252 (257)
                      ..++|+.+ ...+++..-+..+.+++.|+++||| ++|+.+++|+.++++|++.-+..
T Consensus        47 s~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e-~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         47 AWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE-SASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHhhhcc
Confidence            56677654 4556777888899999999999996 99999999999999999876543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.86  E-value=0.048  Score=39.56  Aligned_cols=54  Identities=19%  Similarity=0.283  Sum_probs=45.3

Q ss_pred             HHHhhccch-hHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHH
Q 038856          196 FLNTILNSA-LTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYA  250 (257)
Q Consensus       196 ~~~i~~~~~-~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~  250 (257)
                      ..+.|+.+. ..+++..-+..+.+++.|+++||| ++|+.+++|+.+++.|++.-+
T Consensus        53 s~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e-~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         53 SQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQ-RLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhc
Confidence            566777653 456777788889999999999996 999999999999999998753

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.82  E-value=0.0049  Score=50.85  Aligned_cols=73  Identities=16%  Similarity=0.161  Sum_probs=59.5

Q ss_pred             ChhHHHHHhHHHHHH-HHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhh
Q 038856           24 PLKTLVHTLPLALSY-LLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAF   96 (257)
Q Consensus        24 ~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~   96 (257)
                      +.+....-+..+++. ..=+.+.+.+++.+|...+.++.++.|.+.++.++++++|++|..||+++..++.++.
T Consensus       205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            333333444444443 3457788899999999999999999999999999999999999999999998887765

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.69  E-value=0.0068  Score=52.21  Aligned_cols=117  Identities=20%  Similarity=0.182  Sum_probs=81.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHH
Q 038856          106 DAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSC  185 (257)
Q Consensus       106 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  185 (257)
                      ...|..+++.++++.+...+++|+-..+.+.++..-.                  ++     ..+...++.+|..++..+
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~------------------~~-----~~~~l~~~~W~~G~~~~~   61 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG------------------SG-----GRSYLRRPLWWIGLLLMV   61 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc------------------ch-----hhHHHhhHHHHHHHHHHh
Confidence            3579999999999999999999986543222111000                  00     001113444555554433


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHH
Q 038856          186 IMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYA  250 (257)
Q Consensus       186 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~  250 (257)
                      + +-..+   +.++...++...+.++.+.-+...+++..++|| +++..++.|..+++.|..+..
T Consensus        62 ~-g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e-~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   62 L-GEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGE-KLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             c-chHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcc-cchHhHHhhHHHHHhhheeeE
Confidence            3 22222   456777888889999999999999999999996 999999999999999987543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.38  E-value=0.26  Score=37.72  Aligned_cols=140  Identities=14%  Similarity=0.039  Sum_probs=85.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHH
Q 038856          108 YGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIM  187 (257)
Q Consensus       108 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  187 (257)
                      ...+.++.+..+.+...-...++.+..+ +|..-.+.+...+...+.......++.... .  ...+..+|  ....|++
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~-a--~~~~~pwW--~~~GG~l   78 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGL-A--AVASAPWW--AWIGGLL   78 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCch-h--hccCCchH--HHHccch
Confidence            4566777778888888877777766433 566666677777777776665553332211 1  11222223  3345566


Q ss_pred             HHHHHHHHHHHhhccchhHHHHHhHhHHH-HHHHHHHHhcC---CcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          188 AFLINYYVFLNTILNSALTQTICGNLKDL-LTIGLGWLLFG---GLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       188 ~~~~~~~~~~~i~~~~~~~~s~~~~~~~i-~~~~~~~~~f~---e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      +..+-+.......+.++.....+.....+ .+.+++.+=+.   +.+++...++|..++++|+++.++.+
T Consensus        79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            66655555667777777776665554443 34444443222   23789999999999999966655544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.11  E-value=0.019  Score=41.78  Aligned_cols=67  Identities=15%  Similarity=0.124  Sum_probs=55.8

Q ss_pred             HhHHHHHHHHHHHHhhhhhccccchHHHHH-HHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhh
Q 038856           31 TLPLALSYLLYMLITMEAVRGINVPMYTTL-RRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFL   97 (257)
Q Consensus        31 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~~-~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~   97 (257)
                      +...-.++......+++.++..+++.+.-+ .+++=++|++.++++.+|..++++++++.+++.|+.+
T Consensus        44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            333334566677778889999999998777 5899999999999998888899999999999999875

Many members are annotated as potential transmembrane proteins.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.03  E-value=0.36  Score=42.02  Aligned_cols=139  Identities=14%  Similarity=0.100  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHHhcc--cCCCChhhHHHHHHHHHHHHHHHHHHhcCch--hhhhcCC---CCCchhHHHHHHHHH
Q 038856          113 VFIANICTAAYLAFISRIGR--SSGLSSFGLMWCNGIICTPILLFWTSFRGDL--EVTMNFP---LLFYPGFQVVMLLSC  185 (257)
Q Consensus       113 ~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~--~~~~~~~---~~~~~~~~~~l~~~~  185 (257)
                      ++...+-.+......|...+  +.+..+.+..+..=+.-.+++.......+..  +......   .+.++....-+..-.
T Consensus        20 l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa   99 (345)
T KOG2234|consen   20 LIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPA   99 (345)
T ss_pred             HHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHH
Confidence            33334444444444443332  2345666666666566566665544433211  1110000   011221223334444


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhh
Q 038856          186 IMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYC  252 (257)
Q Consensus       186 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~  252 (257)
                      .+-..-|...+.+..+.+|.++++...+|...+.+++.+++++ +++..||....+.++|+..-+..
T Consensus       100 ~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~r-kLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen  100 LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRR-KLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHhcc
Confidence            4444445555888999999999999999999999999999995 99999999999999999988733

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.01  E-value=0.032  Score=39.28  Aligned_cols=46  Identities=17%  Similarity=0.111  Sum_probs=25.7

Q ss_pred             HHHhhccchhHH-HHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHH
Q 038856          196 FLNTILNSALTQ-TICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALG  242 (257)
Q Consensus       196 ~~~i~~~~~~~~-s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li  242 (257)
                      ..++|+.+...+ ++..-+..+...+.|.++||| ++|+.+++|+.++
T Consensus        47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E-~~s~~~~~gi~lI   93 (93)
T PF00893_consen   47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE-SLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred             HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHhheeeC
Confidence            567888655444 666678889999999999996 9999999998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.95  E-value=0.0015  Score=54.32  Aligned_cols=71  Identities=18%  Similarity=0.341  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhh
Q 038856          181 MLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYC  252 (257)
Q Consensus       181 l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~  252 (257)
                      +++=|+.|+..-+..+++.++.+-..++++....|+++++++|.+++| ++|..+.+|..+++.|+++..|.
T Consensus       100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE-~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKE-PFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcC-CCcHHHHHHHHHhhheEEEEecC
Confidence            344455555444556788899999999999999999999999999996 99999999999999999876543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.73  E-value=0.094  Score=44.26  Aligned_cols=61  Identities=11%  Similarity=0.014  Sum_probs=54.2

Q ss_pred             HHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHH
Q 038856           29 VHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVG   89 (257)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~   89 (257)
                      ++-...|+++...+.++..|.+...++.+..+..+.++...+.+.+++||+-+++++....
T Consensus       196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence            4456778999999999999999999999999999999999999999999998888775433

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.77  E-value=0.053  Score=47.38  Aligned_cols=75  Identities=17%  Similarity=0.178  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          179 VVMLLSCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       179 ~~l~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                      -.-++.|.+-+..+|..+.+++.++....+++......++..+|.++-+| ++|+..+++.++.++|+++.+..+.
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e-~ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVE-RFTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcc-hhhHHHHHHHHHhhccEEEEEeccc
Confidence            34567788888889999999999999999999999999999999999986 9999999999999999988776644

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.02  E-value=0.049  Score=44.94  Aligned_cols=132  Identities=9%  Similarity=-0.019  Sum_probs=83.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHH
Q 038856          109 GYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMA  188 (257)
Q Consensus       109 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  188 (257)
                      .+.++++-++.|+..-....|..    -+|.+...=..+ +.+.+.....+..+        ...++..++.=..+|.+-
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~-GALifaiiv~~~~~--------p~~T~~~~iv~~isG~~W   69 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTL-GALIFAIIVFLFVS--------PELTLTIFIVGFISGAFW   69 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccH-HHHHHHHHHheeec--------CccchhhHHHHHHhhhHh
Confidence            45677888888887666655543    244444333333 33333333222211        123444455666777777


Q ss_pred             HHHHHHHHHHhhccchhHHHHHhH-hHHHHHHHHHHHhcCCcCcchhhh----hHHHHHHHHHHHHHhhhh
Q 038856          189 FLINYYVFLNTILNSALTQTICGN-LKDLLTIGLGWLLFGGLPFDLFNI----VGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       189 ~~~~~~~~~~i~~~~~~~~s~~~~-~~~i~~~~~~~~~f~e~~~t~~~~----~G~~li~~g~~~~~~~k~  254 (257)
                      ...+..++.+++..+..++..+.+ .+-+-+.++|++.||| -.++.+.    +..++++.|+++.+++++
T Consensus        70 s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~E-W~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          70 SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHE-WTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEec-cCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            777777788888776666554443 5667889999999996 7776554    456788889998888876

>TIGR00803 nst UDP-galactose transporter

Probab=92.98  E-value=0.14  Score=42.01  Aligned_cols=62  Identities=16%  Similarity=0.068  Sum_probs=54.1

Q ss_pred             HHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhh
Q 038856           36 LSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFL   97 (257)
Q Consensus        36 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~   97 (257)
                      +.......+-.+.++|.+.....+...+.++++.+++.++++|+++..++.+..+.+.|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34445556667889999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=90.65  E-value=0.63  Score=33.91  Aligned_cols=51  Identities=22%  Similarity=0.118  Sum_probs=36.7

Q ss_pred             HHhhccchhHHHH-HhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHH
Q 038856          197 LNTILNSALTQTI-CGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCF  248 (257)
Q Consensus       197 ~~i~~~~~~~~s~-~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~  248 (257)
                      ..+++.+-+.+.. .+.+.-+++++.++++.+ |..+...++|+++++.|+.+
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge-~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGE-EVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcC-cccchhHHHHHHHHHcCeee
Confidence            3455544333333 356777899999988875 48899999999999999754

Many members are annotated as potential transmembrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.18  E-value=0.33  Score=39.91  Aligned_cols=72  Identities=14%  Similarity=0.050  Sum_probs=60.3

Q ss_pred             hHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhh
Q 038856           26 KTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFL   97 (257)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~   97 (257)
                      ..+.++...++..+..+.+-+.-..+-..=+.++...+--.|+.+.+.++++..++.+||++..+.+.|...
T Consensus       239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            346777888888888888888877776666667777788889999999999999999999999999988765

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=89.96  E-value=0.35  Score=41.94  Aligned_cols=105  Identities=11%  Similarity=-0.047  Sum_probs=65.9

Q ss_pred             HHHHHHHhcccCCC-ChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038856          123 YLAFISRIGRSSGL-SSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLINYYVFLNTIL  201 (257)
Q Consensus       123 ~~v~~~~~~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~  201 (257)
                      .++..|+..++++. -|+.++......+....... ...+..    +.+...+...+.-++-.+++........+..+++
T Consensus        32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~----~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~  106 (316)
T KOG1441|consen   32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLV----PPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSY  106 (316)
T ss_pred             eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCC----CCCccccccchHHHHHHHHHHHHHHHhcchhhhc
Confidence            45566777763332 35555555444343333322 211111    1111123334566666777666655666889999


Q ss_pred             cchhHHHHHhHhHHHHHHHHHHHhcCCcCcch
Q 038856          202 NSALTQTICGNLKDLLTIGLGWLLFGGLPFDL  233 (257)
Q Consensus       202 ~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~  233 (257)
                      .+-....++..+.|+++++++.++.+| +.+.
T Consensus       107 v~VsF~q~iKa~~P~~tvl~~~~~~~~-~~s~  137 (316)
T KOG1441|consen  107 VPVSFYQTIKALMPPFTVLLSVLLLGK-TYSS  137 (316)
T ss_pred             cchhHHHHHHhhcchhHHHHHHHHhCC-CCcc
Confidence            999999999999999999999999996 7765

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.47  E-value=13  Score=32.09  Aligned_cols=133  Identities=15%  Similarity=0.058  Sum_probs=90.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCCCCh-hhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCC--CCchhHHH--HHHH
Q 038856          109 GYAVVFIANICTAAYLAFISRIGRSSGLSS-FGLMWCNGIICTPILLFWTSFRGDLEVTMNFPL--LFYPGFQV--VMLL  183 (257)
Q Consensus       109 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~--~l~~  183 (257)
                      ...-++..+++...-.+..|.....++.+. ..++.+|++.+.+.....-.. +    ..+++.  +...+.|.  .+++
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~----lv~~~~l~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-G----LVNFRPLDLRTAKKWFPVSLLF   87 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-c----eeecCCcChHHHHHHccHHHHH
Confidence            456667777777777777787777666653 345568888777666544321 1    112221  11222232  2333


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhh
Q 038856          184 SCIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYC  252 (257)
Q Consensus       184 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~  252 (257)
                      .+..     ++....+|+.+-..+.++....++.+.+...+++| .+++...+.....+.+|...+...
T Consensus        88 ~~~i-----~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~-~~~~~~v~~Sv~~m~~~s~~~~~~  150 (314)
T KOG1444|consen   88 VGML-----FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFG-KRPSNKVWASVFAMIIGSVAAAFT  150 (314)
T ss_pred             HHHH-----HHccccccccCchHHHHHhhchHHHHHHhHHhhcC-cCchhhHHHHHHHHHHHHHhhccc
Confidence            3322     33456789999999999999999999999999999 599999999999999998876543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=88.71  E-value=1.3  Score=36.29  Aligned_cols=75  Identities=9%  Similarity=0.048  Sum_probs=61.5

Q ss_pred             cChhHHHHHhHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhh
Q 038856           23 VPLKTLVHTLPLALSYLLYMLITMEAVRGINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFL   97 (257)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~   97 (257)
                      ++.+.+...++.|++-.+..++.-+.++.++.+++.+...+.-...++.+.+++++..+...+.++++++...++
T Consensus       219 l~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i  293 (309)
T COG5070         219 LSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI  293 (309)
T ss_pred             CChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence            344445667788888888899999999999999999999999999999999999998888888887777544433

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=88.49  E-value=0.23  Score=39.69  Aligned_cols=62  Identities=23%  Similarity=0.235  Sum_probs=53.6

Q ss_pred             HHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          192 NYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       192 ~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                      +|--..++++.+|+.++-+..-+..+.-+++++++|| ++.-..++..++.+.|+++.++.++
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D-~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGD-RFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhcc-chhhhhHHHHHHHhCcEEEEEeccc
Confidence            5555678999999999999999999999999999997 9999999999998888887766543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=87.45  E-value=1.7  Score=36.52  Aligned_cols=133  Identities=19%  Similarity=0.179  Sum_probs=70.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHH
Q 038856          109 GYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMA  188 (257)
Q Consensus       109 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  188 (257)
                      |++.+++|+++++...+=.||..   .-|++-.+.+++....+.......+.+.       +.. .    ..-++.|.+-
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~~i~~~g~~v~~~~~~-------p~f-~----p~amlgG~lW   65 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCSGIFLVGLVVNLILGF-------PPF-Y----PWAMLGGALW   65 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHHHHHHHHHHHHHhcCC-------Ccc-e----eHHHhhhhhh
Confidence            56778888888888888777653   2466555555544333333333333221       111 1    1122333332


Q ss_pred             HHHHHHHHHHhhccch-hHHHHHhHhHHHHHHHHHHH-hcCCc--C--cchhhhhHHHHHHHHHHHHHhhhhcC
Q 038856          189 FLINYYVFLNTILNSA-LTQTICGNLKDLLTIGLGWL-LFGGL--P--FDLFNIVGQALGFLGSCFYAYCKLQG  256 (257)
Q Consensus       189 ~~~~~~~~~~i~~~~~-~~~s~~~~~~~i~~~~~~~~-~f~e~--~--~t~~~~~G~~li~~g~~~~~~~k~~~  256 (257)
                      ...|....-.+|..+- .-..+-+..+-+.+...|-+ +||++  .  -.+.+++|.+++++|..+|...|..+
T Consensus        66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            2223333333444332 22223333444455554433 55431  1  35889999999999999999877543

The region concerned is approximately 280 residues long.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=87.31  E-value=2.6  Score=31.93  Aligned_cols=64  Identities=14%  Similarity=0.246  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHhhhhhccccchHHHHHH-HHHHHHHHHHHHH----HhCcccCcchhHHHHHHHhhhhh
Q 038856           34 LALSYLLYMLITMEAVRGINVPMYTTLR-RTTVAFTMIVEYL----LTGQKHSLPVVGSVGIILLGAFL   97 (257)
Q Consensus        34 ~~~~~~~~~~~~~~al~~~~~~~~~~~~-~~~pv~~~i~~~l----~~~e~~~~~~~~~~~~~~~Gv~~   97 (257)
                      -|++......+...+...+.++....+. ..+-+..++.+.+    .-|+++++.+.+++.++++|+.+
T Consensus        70 GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   70 GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5677788888889999998888766554 4566667777775    35688999999999999999863

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=84.17  E-value=27  Score=30.17  Aligned_cols=128  Identities=16%  Similarity=0.092  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHhcc-cCC------CChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHHHHHHHHH
Q 038856          119 CTAAYLAFISRIGR-SSG------LSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLSCIMAFLI  191 (257)
Q Consensus       119 ~~a~~~v~~~~~~~-~~~------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  191 (257)
                      .+-.+.++++|+.. ++.      -++.-+.+.|.+.+.+....+..  ...     -+. .....|.---+.++....-
T Consensus        25 t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~--~~k-----~~~-~~~apl~~y~~is~tn~~s   96 (327)
T KOG1581|consen   25 TFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK--WWK-----KEL-SGVAPLYKYSLISFTNTLS   96 (327)
T ss_pred             HHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh--ccc-----ccC-CCCCchhHHhHHHHHhhcc
Confidence            34446677777662 221      13444566777776665533322  111     111 1111233444555555566


Q ss_pred             HHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhhc
Q 038856          192 NYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKLQ  255 (257)
Q Consensus       192 ~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~~  255 (257)
                      ..+.+.++|+.|=.+..+.-.-|-+..++++.++.+. +.++...+=..++-.|+.++...+..
T Consensus        97 ~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~-ky~~~eYl~~~LIs~GvsiF~l~~~s  159 (327)
T KOG1581|consen   97 SWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGR-KYSSFEYLVAFLISLGVSIFSLFPNS  159 (327)
T ss_pred             hHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcC-ccCcHHHHHHHHHHhheeeEEEecCC
Confidence            6677889999999999999999999999999999995 99999999999999998888776543

>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix

Probab=83.75  E-value=33  Score=30.89  Aligned_cols=84  Identities=18%  Similarity=0.137  Sum_probs=32.7

Q ss_pred             HHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcccccccchh-hHHHHHHH-HHHHHHHHHHHHHhcccCCCChhhHHHH
Q 038856           67 FTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGARDLSFDAY-GYAVVFIA-NICTAAYLAFISRIGRSSGLSSFGLMWC  144 (257)
Q Consensus        67 ~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~~~~~~~~-G~~~~l~a-~~~~a~~~v~~~~~~~~~~~~~~~~~~~  144 (257)
                      ...+.+++ .++|++.....  --.++|.+-...+....++. ..+.++++ .+++-.+..+.||..-+-..+...+=..
T Consensus       237 ~~~~~~~~-~~gk~~~~~~~--nG~laGlVaita~~~~v~p~~A~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~  313 (399)
T PF00909_consen  237 TWLLISYL-LSGKWSMVGIC--NGALAGLVAITAGAGYVTPWGALLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGV  313 (399)
T ss_dssp             HHHHHHHH-HCSS--HHHHH--HHHHHHHHHHTTTTTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHH
T ss_pred             HHHHhhhc-cccccchhhhh--hhhhhhhhheecccCCCcHHHHHHhhhhHhhhhhhheecccceeEeccccceEeeeec
Confidence            33333433 34555544332  23344554443333333333 45555655 3444444434444432212333333333


Q ss_pred             HHHHHHHHH
Q 038856          145 NGIICTPIL  153 (257)
Q Consensus       145 ~~l~~~~~l  153 (257)
                      ..+.+.+..
T Consensus       314 ~Gi~G~i~~  322 (399)
T PF00909_consen  314 GGIWGTILT  322 (399)
T ss_dssp             HHHHHHHHH
T ss_pred             cHHHHHHHH
Confidence            344444333

It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.05  E-value=0.77  Score=39.51  Aligned_cols=116  Identities=19%  Similarity=0.200  Sum_probs=76.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHHHHHHHhcCchhhhhcCCCCCchhHHHHHHHH
Q 038856          105 FDAYGYAVVFIANICTAAYLAFISRIGRSSGLSSFGLMWCNGIICTPILLFWTSFRGDLEVTMNFPLLFYPGFQVVMLLS  184 (257)
Q Consensus       105 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  184 (257)
                      .+..|.++++.+.+..+...++.||-+++.....                   .--+|    ..++...++.+|..++..
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~-------------------~ra~~----gg~~yl~~~~Ww~G~ltm   74 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG-------------------LRAGE----GGYGYLKEPLWWAGMLTM   74 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHhhhc-------------------ccccC----CCcchhhhHHHHHHHHHH
Confidence            3457888888888888888877776554321100                   00011    111222334445555444


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHHhHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHH
Q 038856          185 CIMAFLINYYVFLNTILNSALTQTICGNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCF  248 (257)
Q Consensus       185 ~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~  248 (257)
                      ++. =..|   |.+....+++..+.++.+.-+.+++++..+++| ++++...+|++++++|...
T Consensus        75 ~vG-ei~N---FaAYaFAPasLVtPLGAlsvi~saila~~~L~E-kl~~~g~lGc~l~v~Gst~  133 (335)
T KOG2922|consen   75 IVG-EIAN---FAAYAFAPASLVTPLGALSVIISAILASFFLKE-KLNLLGILGCVLCVVGSTT  133 (335)
T ss_pred             HHH-hHhh---HHHHhhchHhhhccchhHHHHHHHHHHHHHHHH-HHHHhhhhheeEEecccEE
Confidence            443 2223   445566678888888889999999999999985 9999999999999998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.52
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.47
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.44
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.27

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.52  E-value=3.7e-07  Score=65.66  Aligned_cols=69  Identities=12%  Similarity=0.211  Sum_probs=62.1

Q ss_pred             HHHHHHHHHHHHhhhhhccccchHHHHH-HHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhccc
Q 038856           33 PLALSYLLYMLITMEAVRGINVPMYTTL-RRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGAR  101 (257)
Q Consensus        33 ~~~~~~~~~~~~~~~al~~~~~~~~~~~-~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~~  101 (257)
                      ...+.+....++...++++.|++.+..+ ..+.|+++.+.+++++||++++.++.++.++++|++.+...
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3345677888999999999999999888 89999999999999999999999999999999999987544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.47  E-value=3.9e-07  Score=68.03  Aligned_cols=69  Identities=17%  Similarity=0.237  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHH-HHHhhccchhHHHHH-hHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhh
Q 038856          184 SCIMAFLINYYV-FLNTILNSALTQTIC-GNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCK  253 (257)
Q Consensus       184 ~~~~~~~~~~~~-~~~i~~~~~~~~s~~-~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k  253 (257)
                      .+++++...+.. ..++|+.++..+..+ ..+.|+.++++|+++||| ++|+.+++|++++++|+++.++.+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE-~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCC
Confidence            334444444444 788999999988777 899999999999999996 999999999999999999988754

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.44  E-value=4e-07  Score=67.94  Aligned_cols=68  Identities=12%  Similarity=0.225  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHhhhhhccccchHHHHH-HHHHHHHHHHHHHHHhCcccCcchhHHHHHHHhhhhhhcc
Q 038856           33 PLALSYLLYMLITMEAVRGINVPMYTTL-RRTTVAFTMIVEYLLTGQKHSLPVVGSVGIILLGAFLAGA  100 (257)
Q Consensus        33 ~~~~~~~~~~~~~~~al~~~~~~~~~~~-~~~~pv~~~i~~~l~~~e~~~~~~~~~~~~~~~Gv~~~~~  100 (257)
                      ...+.+....++.+.+++++|++.+..+ .++.|++++++++++++|++++.++++++++++|++++..
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3345678889999999999999999888 8999999999999999999999999999999999998744

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.27  E-value=5e-06  Score=59.67  Aligned_cols=67  Identities=16%  Similarity=0.214  Sum_probs=55.8

Q ss_pred             HHHHHHHHH-HHHhhccchhHHHHH-hHhHHHHHHHHHHHhcCCcCcchhhhhHHHHHHHHHHHHHhhhh
Q 038856          187 MAFLINYYV-FLNTILNSALTQTIC-GNLKDLLTIGLGWLLFGGLPFDLFNIVGQALGFLGSCFYAYCKL  254 (257)
Q Consensus       187 ~~~~~~~~~-~~~i~~~~~~~~s~~-~~~~~i~~~~~~~~~f~e~~~t~~~~~G~~li~~g~~~~~~~k~  254 (257)
                      .+....+.. ..++|+.+...+..+ ..+.|+.+++.|+++||| ++|+.+++|..++++|++..+..++
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E-~~s~~~~~Gi~lIi~Gv~~l~~~~~  106 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLIINLLSR  106 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            333334443 678999988888776 899999999999999996 9999999999999999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00