Citrus Sinensis ID: 039020

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-

SQSSQDSDRCLLPDSTESNEDEGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKSDQGRTPVPSGQVHPSTRYTMNYLKYACEYRDTLEEVFRFHHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDELFDGNPMSMGRRRN

ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccccc

cccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccEccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHEEEEcHHHHHHHHHHHHcccccccccccc

sqssqdsdrcllpdstesnedegfpnfstEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNklgfdsitidDAHRMQWESLEREIGSWISIFKHCYrnlfpgerkfsdaifseypstsQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELEnsiksdqgrtpvpsgqvhpstrytMNYLKYACEYRDTLEEVFRFhhknegfddapnqenhdINEHltempnddgtpkkspFAIELIAVMDLLDANLEMKsrlyrdpaLRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDElfdgnpmsmgrrrn

sqssqdsdrcllpdstesnedegfpNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENsiksdqgrtpvpsgqvhpstryTMNYLKYACEYRDTLEEVFRFHHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIhrtqstwvvSDEQLQSELRVSisavvtpayrsfVGRFKQYLEGRSMDKYIKYQPEDIETLidelfdgnpmsmgrrrn

*******************************ISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELE********************TRYTMNYLKYACEYRDTLEEVFRFHH**********************************FAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDELF************

*********************EGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITID*A**MQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKS*********GQVHPSTRYTMNYLKYACEYRDTLEEVFRFHH*********************************PFAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVL******************LKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQ*******DKYIKYQPEDIETLIDE**************

**********************GFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKS************HPSTRYTMNYLKYACEYRDTLEEVFRFHHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDELFDGNPMSMGRRRN

*******************EDEGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKSDQGRTPVPSGQVHPSTRYTMNYLKYACEYRDTLEEVFRFHH*******************************KSPFAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGL*ANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDELFDGN*********

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		481	2.2.26 [Sep-21-2011]
O54922		653	Exocyst complex component	yes	no	0.357	0.263	0.333	7e-19
Q9UPT5		735	Exocyst complex component	yes	no	0.357	0.234	0.333	1e-18
O35250		697	Exocyst complex component	no	no	0.357	0.246	0.333	2e-18
Q9VSJ8		693	Exocyst complex component	yes	no	0.380	0.264	0.302	4e-11
P19658		623	Exocyst complex component	yes	no	0.723	0.558	0.210	5e-09
Q6FJW2		623	Exocyst complex protein E	yes	no	0.875	0.675	0.210	6e-09
Q6CK11		619	Exocyst complex protein E	yes	no	0.301	0.234	0.287	2e-07
Q6CC70		603	Exocyst complex protein E	yes	no	0.347	0.276	0.247	6e-07
Q4X0X6		628	Exocyst complex protein e	yes	no	0.829	0.635	0.219	4e-06
Q754H0		614	Exocyst complex protein E	yes	no	0.340	0.267	0.252	9e-05

>sp\|O54922\|EXOC7_RAT Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1	Back alignment and function desciption

 Score = 95.5 bits (236), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 11/183 (6%)

Query: 297 VMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWC---RKRST 353
           V+  L  NL  KS++Y DPAL  +FL NN  YIL+ ++ S E+  ++ VT     R    
Sbjct: 470 VLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKS-ELIQLVAVTQKTAERSYRE 528

Query: 354 QLRQYHKNYQRETWSRVLQCISHEGLQANGKVVK------AVLKERFKNFNALFEEIHRT 407
            + Q  + YQR +W +V   I+ + L      VK       ++KERFK FN   EE+ + 
Sbjct: 529 HIEQQIQTYQR-SWLKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFNDGLEELCKI 587

Query: 408 QSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDE 467
           Q  W + D + + ++R +  ++V   Y +F+ R+      ++ +KYIKY+ E +  +ID 
Sbjct: 588 QKAWAIPDTEQRDKIRQAQKSIVKETYGAFLHRYSSVPFTKNPEKYIKYRVEQVGDMIDR 647

Query: 468 LFD 470
           LFD
Sbjct: 648 LFD 650

Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. In adipocytes, plays a crucial role in targeting SLC2A4 vesicle to the plasma membrane in response to insulin, perhaps directing the vesicle to the precise site of fusion.
Rattus norvegicus (taxid: 10116)

>sp\|Q9UPT5\|EXOC7_HUMAN Exocyst complex component 7 OS=Homo sapiens GN=EXOC7 PE=1 SV=3	Back alignment and function description

>sp\|O35250\|EXOC7_MOUSE Exocyst complex component 7 OS=Mus musculus GN=Exoc7 PE=1 SV=2	Back alignment and function description

>sp\|Q9VSJ8\|EXOC7_DROME Exocyst complex component 7 OS=Drosophila melanogaster GN=exo70 PE=1 SV=2	Back alignment and function description

>sp\|P19658\|EXO70_YEAST Exocyst complex component EXO70 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EXO70 PE=1 SV=1	Back alignment and function description

>sp\|Q6FJW2\|EXO70_CANGA Exocyst complex protein EXO70 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=EXO70 PE=3 SV=1	Back alignment and function description

>sp\|Q6CK11\|EXO70_KLULA Exocyst complex protein EXO70 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=EXO70 PE=3 SV=1	Back alignment and function description

>sp\|Q6CC70\|EXO70_YARLI Exocyst complex protein EXO70 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EXO70 PE=3 SV=1	Back alignment and function description

>sp\|Q4X0X6\|EXO70_ASPFU Exocyst complex protein exo70 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exo70 PE=3 SV=1	Back alignment and function description

>sp\|Q754H0\|EXO70_ASHGO Exocyst complex protein EXO70 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=EXO70 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		481
224057804		652	predicted protein [Populus trichocarpa]	0.981	0.723	0.660	0.0
255547616		668	protein binding protein, putative [Ricin	0.968	0.697	0.664	0.0
225425194		654	PREDICTED: uncharacterized protein LOC10	0.979	0.720	0.633	1e-180
15240035		653	exocyst complex component 7 [Arabidopsis	0.970	0.715	0.607	1e-168
297811435		650	ATEXO70C1 [Arabidopsis lyrata subsp. lyr	0.972	0.72	0.605	1e-167
449445178		654	PREDICTED: exocyst complex component 7-l	0.979	0.720	0.566	1e-161
449469190		674	PREDICTED: LOW QUALITY PROTEIN: exocyst	0.964	0.688	0.567	1e-160
449484844		674	PREDICTED: exocyst complex component 7-l	0.964	0.688	0.567	1e-160
255559253		736	protein binding protein, putative [Ricin	0.983	0.642	0.561	1e-157
224115404		704	predicted protein [Populus trichocarpa]	0.950	0.649	0.559	1e-151

>gi\|224057804\|ref\|XP_002299332.1\| predicted protein [Populus trichocarpa] gi\|222846590\|gb\|EEE84137.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/480 (66%), Positives = 379/480 (78%), Gaps = 8/480 (1%)

Query: 3   SSQDSDRCLLPDSTESNEDEGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNA 62
           S Q+S  C++P+S +S+ED  FP +++EAIS MN+IATAMIS GYE+ECCM Y   RRNA
Sbjct: 178 SRQESTYCVIPES-KSSEDVEFPAYTSEAISKMNRIATAMISSGYESECCMVYNMVRRNA 236

Query: 63  FREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYP 122
           F   L+KLGF++I+IDD  RMQW+SLE  I  WI++ KH    LF GERK   +IFSE+P
Sbjct: 237 FSSELDKLGFENISIDDVQRMQWQSLEGVIAMWITVIKHSSSVLFSGERKLCSSIFSEHP 296

Query: 123 STSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTI-DDSYSKE 181
           S SQRLF  +A AV   F++FS+ IALTKRSAE+LFK LDM E L DL+    DD+ S E
Sbjct: 297 SISQRLFCHIALAVAVRFVNFSDAIALTKRSAEKLFKILDMYEALRDLIPFFDDDTCSSE 356

Query: 182 ISQDLTSEIAVVKSQLAEAAASIFCELENSIKSDQGRTPVPSGQVHPSTRYTMNYLKYAC 241
             ++L SEI   K +L E A SIFC+LENSI+ D GRTPVPSG VHP TRYTMNYLKYAC
Sbjct: 357 CYEELKSEIWAAKGRLGEVAVSIFCDLENSIRRDNGRTPVPSGAVHPLTRYTMNYLKYAC 416

Query: 242 EYRDTLEEVFRFHHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLL 301
           EY+DTLE+VF+ H K EGF ++ N    DI        NDDGTPK SPF+++L ++MDLL
Sbjct: 417 EYKDTLEQVFQKHQKMEGFANS-NGTVLDIKNG----ANDDGTPKTSPFSVQLNSIMDLL 471

Query: 302 DANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKN 361
           D NL+MKS+LYRDPALR +FLMNNGRYILQKIKGS+EIH+MMG TWCRKRS+ LRQYHK 
Sbjct: 472 DENLDMKSKLYRDPALRCIFLMNNGRYILQKIKGSDEIHDMMGDTWCRKRSSDLRQYHKA 531

Query: 362 YQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSE 421
           Y RETW+R+LQC++H+GL  NGK+ K +LKERFK F+ +F+EIHRTQSTWVVSD+QLQSE
Sbjct: 532 YTRETWTRLLQCLNHDGLMVNGKLSKTILKERFKMFSTMFDEIHRTQSTWVVSDDQLQSE 591

Query: 422 LRVSISAVVTPAYRSFVGRFKQYL-EGRSMDKYIKYQPEDIETLIDELFDGNPMSMGRRR 480
           LR+S+SAVVTPAYRSFVGRF+QYL  GR  DKYIKYQPEDIE LIDELFDGNP SM RRR
Sbjct: 592 LRISVSAVVTPAYRSFVGRFQQYLASGRQPDKYIKYQPEDIENLIDELFDGNPTSMARRR 651

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255547616\|ref\|XP_002514865.1\| protein binding protein, putative [Ricinus communis] gi\|223545916\|gb\|EEF47419.1\| protein binding protein, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|225425194\|ref\|XP_002264953.1\| PREDICTED: uncharacterized protein LOC100259218 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|15240035\|ref\|NP_196819.1\| exocyst complex component 7 [Arabidopsis thaliana] gi\|9955559\|emb\|CAC05443.1\| putative protein [Arabidopsis thaliana] gi\|332004474\|gb\|AED91857.1\| exocyst complex component 7 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297811435\|ref\|XP_002873601.1\| ATEXO70C1 [Arabidopsis lyrata subsp. lyrata] gi\|297319438\|gb\|EFH49860.1\| ATEXO70C1 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|449445178\|ref\|XP_004140350.1\| PREDICTED: exocyst complex component 7-like [Cucumis sativus] gi\|449479978\|ref\|XP_004155765.1\| PREDICTED: exocyst complex component 7-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449469190\|ref\|XP_004152304.1\| PREDICTED: LOW QUALITY PROTEIN: exocyst complex component 7-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449484844\|ref\|XP_004156996.1\| PREDICTED: exocyst complex component 7-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|255559253\|ref\|XP_002520647.1\| protein binding protein, putative [Ricinus communis] gi\|223540167\|gb\|EEF41743.1\| protein binding protein, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224115404\|ref\|XP_002332164.1\| predicted protein [Populus trichocarpa] gi\|222875154\|gb\|EEF12285.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		481
TAIR\|locus:2179847		653	EXO70C1 "exocyst subunit exo70	0.975	0.718	0.604	1.2e-152
TAIR\|locus:2159058		695	EXO70C2 "exocyst subunit exo70	0.428	0.296	0.623	5e-125
TAIR\|locus:2171208		624	EXO70B1 "AT5G58430" [Arabidops	0.405	0.312	0.447	7.2e-88
TAIR\|locus:2087447		623	EXO70D3 "AT3G14090" [Arabidops	0.912	0.704	0.386	7.2e-84
TAIR\|locus:2194022		633	EXO70D1 "exocyst subunit exo70	0.914	0.695	0.382	5e-83
TAIR\|locus:2014355		622	EXO70D2 "exocyst subunit exo70	0.916	0.709	0.380	1.8e-80
TAIR\|locus:2177532		683	EXO70F1 "exocyst subunit exo70	0.875	0.616	0.372	6.2e-78
TAIR\|locus:2007347		599	EXO70B2 "AT1G07000" [Arabidops	0.490	0.393	0.344	1.2e-75
TAIR\|locus:2156707		631	EXO70A2 "exocyst subunit exo70	0.378	0.288	0.377	3.4e-67
TAIR\|locus:2093802		658	EXO70E1 "exocyst subunit exo70	0.952	0.696	0.295	2.2e-59

TAIR\|locus:2179847 EXO70C1 "exocyst subunit exo70 family protein C1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
 Identities = 292/483 (60%), Positives = 368/483 (76%)

Query:     1 SQSSQDSDRCLLPDSTESNEDEGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRR 60
             + S+ DSDRC+L D  E+ E+E F +FS E+IS + KIA AMIS GYEAECCM+Y   RR
Sbjct:   182 NSSTNDSDRCVLQDHEEA-EEESFHDFSPESISTLKKIAGAMISAGYEAECCMSYEMSRR 240

Query:    61 NAFREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIF-- 118
             +AF+E L ++GF+ I ++D  R+ WESLE EI SWISI + C   LFPGE    +A+F  
Sbjct:   241 HAFKEELTEVGFEGINVEDVQRIGWESLEGEIASWISIVRRCSTVLFPGELSLCNAVFPD 300

Query:   119 SEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSY 178
              ++ S  +RLF+ L +AV   FL FS  + LTKRS+E+LFKFLDM ETL DL+  ++ S 
Sbjct:   301 QDHSSVRKRLFTGLVSAVTIRFLDFSGAVVLTKRSSEKLFKFLDMYETLRDLIPAVEQSD 360

Query:   179 SKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKSDQGRTPVPSGQVHPSTRYTMNYLK 238
             S     DL  EI + +++L EAA +IF ELE SIKSD GRTPVPSG VHP TRYTMNYLK
Sbjct:   361 S-----DLIQEIKLAQTRLGEAAVTIFGELEKSIKSDNGRTPVPSGAVHPLTRYTMNYLK 415

Query:   239 YACEYRDTLEEVFRFHHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVM 298
             YACEY++TL++VF+ +  N+  D+ P  E     +   +   DD   K S FA ++I VM
Sbjct:   416 YACEYKETLDQVFQHYEANQT-DNKPEPET----KPRQQQREDDEEYKVSAFARQMIRVM 470

Query:   299 DLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQY 358
             +LLDANLE+KSRLYRDP+LR++FLMNNGRYILQKIKGS EI ++MG +W RKRST+LRQY
Sbjct:   471 ELLDANLEIKSRLYRDPSLRFIFLMNNGRYILQKIKGSIEIRDLMGQSWTRKRSTELRQY 530

Query:   359 HKNYQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQL 418
             HK+YQRETW +VLQC++ EGLQ NGKV K VLKERFK FNA+F+EIH+TQSTW+VSDEQ+
Sbjct:   531 HKSYQRETWGKVLQCMNQEGLQVNGKVSKPVLKERFKIFNAMFDEIHKTQSTWIVSDEQM 590

Query:   419 QSELRVSISAVVTPAYRSFVGRFKQYLE-GRSMDKYIKYQPEDIETLIDELFDGNPMSMG 477
             QSELRVSIS++V PAYRSF GR+KQ+L+ G+  DKY+KYQPEDIE+ ID+LFDGNP SM 
Sbjct:   591 QSELRVSISSLVIPAYRSFFGRYKQHLDSGKQTDKYVKYQPEDIESFIDDLFDGNPTSMA 650

Query:   478 RRR 480
             R+R
Sbjct:   651 RKR 653

GO:0000145 "exocyst" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006887 "exocytosis" evidence=IEA

GO:0006904 "vesicle docking involved in exocytosis" evidence=ISS

GO:0090406 "pollen tube" evidence=IDA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR\|locus:2159058 EXO70C2 "exocyst subunit exo70 family protein C2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2171208 EXO70B1 "AT5G58430" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2087447 EXO70D3 "AT3G14090" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2194022 EXO70D1 "exocyst subunit exo70 family protein D1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2014355 EXO70D2 "exocyst subunit exo70 family protein D2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2177532 EXO70F1 "exocyst subunit exo70 family protein F1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2007347 EXO70B2 "AT1G07000" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2156707 EXO70A2 "exocyst subunit exo70 family protein A2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2093802 EXO70E1 "exocyst subunit exo70 family protein E1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.I.7822.1	hypothetical protein (594 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		481
pfam03081		357	pfam03081, Exo70, Exo70 exocyst complex subunit	1e-104

>gnl\|CDD\|217359 pfam03081, Exo70, Exo70 exocyst complex subunit	Back alignment and domain information

 Score =  313 bits (804), Expect = e-104
 Identities = 140/377 (37%), Positives = 206/377 (54%), Gaps = 24/377 (6%)

Query: 96  ISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSE-VIALTKRSA 154
           I  +    + L  GER+  D +FS   S  +  F+E+A   I   L F E V +  KRS 
Sbjct: 1   IRAYTVAVKVLLAGERQLCDEVFS--SSIRESCFAEIAQESILQLLKFGEAVASKNKRSP 58

Query: 155 ERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKS 214
           E+LF+ LDM E L++LL  +D  +S E    + SE+  +  +L E A SIF E E+ I+S
Sbjct: 59  EKLFELLDMYEALSELLPDLDALFSGEAGS-VRSELNELLKRLGETARSIFEEFESLIRS 117

Query: 215 DQGRTPVPSGQVHPSTRYTMNYLKYACEYRDTLEEVFRFHHKNEGFDDAPNQENHDINEH 274
           D  +T  P G VHP TRY MNYL+   EY+DTL  +      + G+  +           
Sbjct: 118 DSSKTVPPDGGVHPLTRYVMNYLRLLAEYKDTLSSILA-SIGDGGWLSSSPANL------ 170

Query: 275 LTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIK 334
                 D  T  +S  +  +  ++D L +NLE KS+ Y+DPAL+ +FL+NN  YILQK++
Sbjct: 171 ------DSDTSPESLLSSYISDIIDALLSNLEAKSKAYKDPALQGLFLLNNLHYILQKVR 224

Query: 335 GSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGKVV---KAVLK 391
            S E+ +++G  W R+   +++QY   Y R  W  VL  +  + + + GK+    K  +K
Sbjct: 225 RS-ELKSLLGDDWIRRLEKKVKQYATLYLRS-WGPVLSLLDDDSVSSVGKLSSKEKEQIK 282

Query: 392 ERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMD 451
           E+FK FN  FEE++R Q  W V D +L+ ELR  I   V PAYR F  R+    +  +  
Sbjct: 283 EKFKKFNEAFEELYRKQKAWKVPDPELRDELRREIKKKVIPAYRRFYDRYGNSDK--TNK 340

Query: 452 KYIKYQPEDIETLIDEL 468
            YIKY PED+E +++EL
Sbjct: 341 SYIKYTPEDLENMLNEL 357

The Exo70 protein forms one subunit of the exocyst complex. First discovered in S. cerevisiae, Exo70 and other exocyst proteins have been observed in several other eukaryotes, including humans. In S. cerevisiae, the exocyst complex is involved in the late stages of exocytosis, and is localised at the tip of the bud, the major site of exocytosis in yeast. Exo70 interacts with the Rho3 GTPase. This interaction mediates one of the three known functions of Rho3 in cell polarity: vesicle docking and fusion with the plasma membrane (the other two functions are regulation of actin polarity and transport of exocytic vesicles from the mother cell to the bud). In humans, the functions of Exo70 and the exocyst complex are less well characterized: Exo70 is expressed in several tissues and is thought to also be involved in exocytosis. Length = 357

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		481
KOG2344		623	consensus Exocyst component protein and related pr	100.0
PF03081		371	Exo70: Exo70 exocyst complex subunit; InterPro: IP	100.0
PF06419		618	COG6: Conserved oligomeric complex COG6; InterPro:	98.9
PF04129		508	Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 V	97.29
KOG3758		655	consensus Uncharacterized conserved protein [Funct	97.29
KOG1961		683	consensus Vacuolar sorting protein VPS52/suppresso	96.78
PF09763		701	Sec3_C: Exocyst complex component Sec3; InterPro:	89.99
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	89.37

>KOG2344 consensus Exocyst component protein and related proteins [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=1.9e-102  Score=833.59  Aligned_cols=441  Identities=42%  Similarity=0.754  Sum_probs=409.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCchHHHHHHHHHhHHHHHHHHHhcCCCCCChhHhhhcChHhHHHHHHhHHHHHHH
Q 039020           22 EGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITIDDAHRMQWESLEREIGSWISIFKH  101 (481)
Q Consensus        22 ~~~~~~~~~~~~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~~L~~L~~~~~~~~~v~~~~~e~~~~~I~~wi~a~~~  101 (481)
                      ..++.+|++++.+|+.||++|+++||.++|+++|..+|+++++++|.+||+++++++++++|+|++++.+|.+|++++++
T Consensus       182 ~~~~~~~~~v~~dLk~Ia~~mi~~gy~~eC~~~Y~~vrk~i~~e~l~~L~~e~ls~~~vq~~~we~le~~I~~Wi~~~kv  261 (623)
T KOG2344|consen  182 IEPDLFPPDVMTDLKAIAQRMIAAGYEKECFKVYKSIRKSILDESLVNLGVEKLSIEDVQRMDWEVLEGKIKKWIKAVKV  261 (623)
T ss_pred             eeccCCCchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhcCeeeccHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            44569999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhchhhHhHHhhhcCCCCcchHHHHHHHHHHHHHHHHhhHHHHHhhccchHHHHHHhhHHHHHHhhHhhhhhhcchh
Q 039020          102 CYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALTKRSAERLFKFLDMCETLNDLLTTIDDSYSKE  181 (481)
Q Consensus       102 ~~~~l~~~E~~L~~~vf~~~~~~~~~~f~~i~~~~i~~ll~f~~~ia~~~r~peklf~lLdm~e~L~~~~p~~~~lf~~~  181 (481)
                      ++++||++|+.||++||++.......||.+|++.++++|++|+++++.++|+|||+|++||||+++.+++|+++.+|+++
T Consensus       262 ~v~~lf~~E~~Lcd~If~~~~~~~~~cF~eI~~~~~~~ll~F~eava~~kr~pEklf~iLd~y~~i~~l~p~ie~lF~~~  341 (623)
T KOG2344|consen  262 AVSVLFEGEKKLCDQIFSDLESIVESCFPEIVKEAALQLLSFPEAVAISKRSPEKLFKLLDLYETIVELRPDIERLFSDA  341 (623)
T ss_pred             HHHHHhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhccchheeeccCCHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            99999999999999999975443228999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccHHHHHHHHHHHHhcHHHHHHHHhhccCCCCCC
Q 039020          182 ISQDLTSEIAVVKSQLAEAAASIFCELENSIKSDQGRTPVPSGQVHPSTRYTMNYLKYACEYRDTLEEVFRFHHKNEGFD  261 (481)
Q Consensus       182 ~~~~~~~~~~~~~~~L~~~~~~~f~ef~~~I~~~~~~~~~~dg~Vh~lT~~vm~yl~~L~~y~~~l~~il~~~~~~~~~~  261 (481)
                      ++.+++.++..++++|+++++++|.||++.|+.++++.|+|||||||||+||||||+.|++|+++|.++|...+  |...
T Consensus       342 ~~s~vr~~~~~~~~rL~~~~~~~~~efe~~I~~d~sk~pv~gG~VHpLTryvmnyl~~L~dy~~tL~~il~~~~--~~~~  419 (623)
T KOG2344|consen  342 SCSEVRSQALSLLKRLGEGVRSIFVEFESAIRKDSSKTPVPGGGVHPLTRYVMNYLNFLADYKDTLEQLLMEDP--VDTS  419 (623)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcChhHHHHHHHHHHHHHHHHHHHHHHhccc--cccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998754  2211


Q ss_pred             CCCCCCccccccccccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHhhhHHHHHHhhhCchhhhh
Q 039020          262 DAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHN  341 (481)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~ksk~y~d~~L~~iFLmNN~~yI~~~~~~s~~l~~  341 (481)
                       .+             .+.+++....++++.+++|||..|++||+.||+.|+|++|++||||||++||+++++ +++|+.
T Consensus       420 -~~-------------~~~~~~~~~~s~l~~~~~~ii~~L~~nLd~Ks~~Y~D~aL~~lFlmNN~~yiv~kvk-ss~L~~  484 (623)
T KOG2344|consen  420 -LP-------------KSESEDESSNSLLAVHIARIILALECNLDTKSKLYKDPALSYLFLMNNLHYIVQKVK-SSELRL  484 (623)
T ss_pred             -cC-------------cccccccccccHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHHHhhHHHHHHHHh-cchHHH
Confidence             00             011223445689999999999999999999999999999999999999999999999 569999


Q ss_pred             hhchhHHHHHHHHHHHHHHHHHHhhHHHHHHhhcccCcCCCccccHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHH
Q 039020          342 MMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGKVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSE  421 (481)
Q Consensus       342 lLg~~w~~~~~~~~~~~~~~Y~~~sW~~vl~~L~~~~~~~~~~~~r~~iKekf~~FN~~Fee~~~~q~~w~VpD~~LR~~  421 (481)
                      +||++|+++|..++++|+..|++++|++|+++|.+++...+++.+|+.+||||++||++|||+|++|++|+||||+||++
T Consensus       485 llGd~wl~kh~~~~~qy~~~Y~r~sW~~vl~~L~~~~s~~~~~~~~~~~Kerfk~FN~~FeEv~k~Qs~wvV~D~~Lr~e  564 (623)
T KOG2344|consen  485 LLGDDWLRKHEEKLRQYATSYERESWGKVLSLLTDEGSSSGGKKSKEVLKERFKLFNEQFEEVYKKQSQWVVPDPKLREE  564 (623)
T ss_pred             HhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCHHHHHHHHHHHHHHHHHHHHhhCceecccHHHHHH
Confidence            99999999999999999999999999999999999875544457899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhhhcccCCCCCcccccCHHHHHHHHHHhhCCCCCCCCCC
Q 039020          422 LRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDELFDGNPMSMGRR  479 (481)
Q Consensus       422 Lr~~i~~~v~PaY~~F~~ky~~~~~~k~~~KyiKytpe~le~~l~~LF~g~~~~~~~~  479 (481)
                      ||.+|.++|+|+|++||+||+....++|++|||||||||||++|++||+|++.+...|
T Consensus       565 Lk~si~~~v~P~Yr~F~~r~~~~~~~k~~~kyikYtpedlE~~L~dLF~g~~~~~s~~  622 (623)
T KOG2344|consen  565 LKISISEKVVPAYRSFYGRYRNSVSGKNPEKYIKYTPEDLENYLSDLFEGSPSSPSGR  622 (623)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccCCCCCCcccccCHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999987645899999999999999999999999998655434

>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex	Back alignment and domain information

>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation	Back alignment and domain information

>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>KOG3758 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]	Back alignment and domain information

>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		481
2pft_A		571	The Crystal Structure Of Mouse Exo70 Reveals Unique		2e-19
2pfv_A		563	S. Cerevisiae Exo70 With Additional Residues To 2.1		2e-10
2b1e_A		564	The Structures Of Exocyst Subunit Exo70p And The Ex		2e-10
2b7m_A		566	Crystal Structure Of The S. Cerevisiae Exocyst Comp		4e-09

>pdb|2PFT|A Chain A, The Crystal Structure Of Mouse Exo70 Reveals Unique Features Of The Mammalian Exocyst Length = 571

Back alignment and structure

Iteration: 1

Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 11/183 (6%) Query: 297 VMDLLDANLEMKSRLYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMGVTWC---RKRST 353 V+ L NL KS++Y DPAL +FL NN YIL+ ++ S E+ ++ VT R Sbjct: 388 VLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKS-ELIQLVAVTQKTAERSYRE 446 Query: 354 QLRQYHKNYQRETWSRVLQCISHEGLQANGKVVK------AVLKERFKNFNALFEEIHRT 407 + Q + YQR +W +V I+ + L VK ++KERFK FN EE+ + Sbjct: 447 HIEQQIQTYQR-SWLKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFNDGLEELCKI 505 Query: 408 QSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDE 467 Q W + D + + ++R + +V Y +F+ R+ ++ +KYIKY+ E + +ID Sbjct: 506 QKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTKNPEKYIKYRVEQVGDMIDR 565 Query: 468 LFD 470 LFD Sbjct: 566 LFD 568

PyMOL of 2pft

>pdb|2PFV|A Chain A, S. Cerevisiae Exo70 With Additional Residues To 2.1 Angrstrom Resolution Length = 563

Back alignment and structure

>pdb|2B1E|A Chain A, The Structures Of Exocyst Subunit Exo70p And The Exo84p C- Terminal Domains Reveal A Common Motif Length = 564

Back alignment and structure

>pdb|2B7M|A Chain A, Crystal Structure Of The S. Cerevisiae Exocyst Component Exo70p Length = 566

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		481
2b1e_A		564	Exocyst complex component EXO70; tethering complex	1e-116
2pft_A		571	Exocytosis protein; helix-turn-helix, endocytosis-	1e-109
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2b1e_A Exocyst complex component EXO70; tethering complex, endocytosis/exocytosis complex; 2.00A {Saccharomyces cerevisiae} PDB: 2b7m_A 2pfv_A Length = 564	Back alignment and structure

 Score =  352 bits (903), Expect = e-116
 Identities = 79/487 (16%), Positives = 176/487 (36%), Gaps = 42/487 (8%)

Query: 7   SDRCLLPDSTESNEDEGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREV 66
           +            +   FP +  + +  ++ I          +         R     + 
Sbjct: 95  NSIKPFDPQINITKKMPFPYYEDQQLGALSWILDYFHGNSEGSIIQDILVGERSKLILKC 154

Query: 67  LNKLGFDSITIDDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQ 126
           +  L   +  I  A    +E     + S+              E+   D ++S+Y  +  
Sbjct: 155 MAFLEPFAKEISTAKNAPYEKGSSGMNSYT----EALLGFIANEKSLVDDLYSQYTESKP 210

Query: 127 RLFSELAAAVITPFLSFSEVIALTKRSAERLFKF--LDMCETLNDLLTTIDDSYSKEISQ 184
            + S++ + +I+ +           RS    F F   ++ E++ND+  ++          
Sbjct: 211 HVLSQILSPLISAYAKLFGANLKIVRSNLENFGFFSFELVESINDVKKSLRGKEL----- 265

Query: 185 DLTSEIAVVKSQLAEAAASIFCELENSIKSD-QGRTPVPS-GQVHPSTRYTMNYLKYACE 242
              + +     ++ +   S+F +  + I       + +PS   V  +T  TM+ L+   E
Sbjct: 266 QNYNLLQDCTQEVRQVTQSLFRDAIDRIIKKANSISTIPSNNGVTEATVDTMSRLRKFSE 325

Query: 243 YRDTLEEVFRFHHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLD 302
           Y++                +     N+   E+  +    +        +  +   +D L 
Sbjct: 326 YKNGCLGAMDNIT-----RENWLPSNYKEKEYTLQNEALNWEDHNVLLSCFISDCIDTLA 380

Query: 303 ANLEMKSRLYRDP-----------------ALRYVFLMNNGRYILQKIKGSNEIHNMMGV 345
            NLE K+++   P                      F++ N   + Q ++ S E++ M+  
Sbjct: 381 VNLERKAQIALMPNQEPDVANPNSSKNKHKQRIGFFILMNLTLVEQIVEKS-ELNLMLAG 439

Query: 346 TWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQANGK---VVKAVLKERFKNFNALFE 402
                R  +L++ + +Y    W  +   +       +       K  +KE+F+ FN  FE
Sbjct: 440 EG-HSRLERLKKRYISYMVSDWRDLTANLMDSVFIDSSGKKSKDKEQIKEKFRKFNEGFE 498

Query: 403 EIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIE 462
           ++      + +SD  L+  L+  I ++V P Y  F  R+K     ++  K+IKY P+++ 
Sbjct: 499 DLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFYSRYKDS--FKNPRKHIKYTPDELT 556

Query: 463 TLIDELF 469
           T++++L 
Sbjct: 557 TVLNQLV 563

PyMOL of 2b1e

>2pft_A Exocytosis protein; helix-turn-helix, endocytosis-exocytosis complex; 2.25A {Mus musculus} Length = 571	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		481
2pft_A		571	Exocytosis protein; helix-turn-helix, endocytosis-	100.0
2b1e_A		564	Exocyst complex component EXO70; tethering complex	100.0

>2pft_A Exocytosis protein; helix-turn-helix, endocytosis-exocytosis complex; 2.25A {Mus musculus}	Back alignment and structure

Probab=100.00  E-value=4.8e-89  Score=736.71  Aligned_cols=426  Identities=20%  Similarity=0.352  Sum_probs=367.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCchHHHHHHHHHhHHHHHHHHHhc------------------------CCCCCChh
Q 039020           23 GFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKL------------------------GFDSITID   78 (481)
Q Consensus        23 ~~~~~~~~~~~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~~L~~L------------------------~~~~~~~~   78 (481)
                      .++.+|++++.+|+.||++|+.+||.++|+++|+++|+.+++++|..|                        |.++.++.
T Consensus       105 ~~~~~~~~~~~~L~~Ia~~m~~~g~~~~~~~~Y~~~R~~~l~~sL~~L~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  184 (571)
T 2pft_A          105 VLEHLPESVLRDVVRISRWLVEYGRNQDFMNVYYQIRSSQLDRSIKGLKEHFRKSSSSSGVPYSPAIPNKRKDTPTKKPI  184 (571)
T ss_dssp             ---SSCHHHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------------
T ss_pred             cccCCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccc
Confidence            345899999999999999999999999999999999999999999999                        33344444


Q ss_pred             HhhhcChHhHHHHHHhHHHHHHHHHHhhchhhHhHHhhhcCCCCcchHHHHHHHHHHHHHHHHhhHHHHH-hhccch--H
Q 039020           79 DAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIA-LTKRSA--E  155 (481)
Q Consensus        79 ~v~~~~~e~~~~~I~~wi~a~~~~~~~l~~~E~~L~~~vf~~~~~~~~~~f~~i~~~~i~~ll~f~~~ia-~~~r~p--e  155 (481)
                      ++++ +|+.++.+|..|++++.++++ ||++||+||++||+.  +.+..||.++|++++..|++|+++|+ ..+|+|  +
T Consensus       185 ~~~~-~~e~~~~~i~~wi~~~~~~~~-l~~~Er~L~~~vf~~--~~~~~~F~~i~~~~~~~ll~f~e~v~~~~kr~~~~~  260 (571)
T 2pft_A          185 KRPG-RDDMLDVETDAYIHCVSAFVK-LAQSEYRLLMEIIPE--HHQKKTFDSLIQDALDGLMLEGENIVSAARKAIIRH  260 (571)
T ss_dssp             ---------CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccc-chHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccch
Confidence            4543 799999999999999998886 899999999999986  56789999999999999999999997 688888  6


Q ss_pred             HHHHHhhHHHH---HHhhHhhhhhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCC-CCCccccH
Q 039020          156 RLFKFLDMCET---LNDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKSDQ-GRTPVP-SGQVHPST  230 (481)
Q Consensus       156 klf~lLdm~e~---L~~~~p~~~~lf~~~~~~~~~~~~~~~~~~L~~~~~~~f~ef~~~I~~~~-~~~~~~-dg~Vh~lT  230 (481)
                      ++|.+++||+.   |.++.|+|+.+|++..+ .++.++.+++++|+++++++|.||.+.|++++ ++.++| ||+|||+|
T Consensus       261 ~~~~~l~l~~~l~~l~~l~p~~~~~f~g~~~-~~~~~~~~~l~~L~~~~~~~f~ef~~~i~~~~~s~~~vp~dg~Vh~lT  339 (571)
T 2pft_A          261 DFSTVLTVFPILRHLKQTKPEFDQVLQGTAA-STKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPKDGTVHELT  339 (571)
T ss_dssp             CCSTTTTHHHHHHHHHHHHHHHHHHTTTSCH-HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSGGGSCTTCCCCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHccCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCccchHH
Confidence            66666655555   99999999999998765 57899999999999999999999999999986 677777 99999999


Q ss_pred             HHHHHHHHHHHhcHHHHHHHHhhccCCCCCCCCCCCCccccccccccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Q 039020          231 RYTMNYLKYACEYRDTLEEVFRFHHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSR  310 (481)
Q Consensus       231 ~~vm~yl~~L~~y~~~l~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~ksk  310 (481)
                      +||||||+.|++|+++|..+|...++.|...        +.          ++..+.++|+.++.++|++|+.|||.||+
T Consensus       340 ~~vmnyl~~L~~y~~~l~~il~~~~~~~~~~--------~~----------~~~~~~~~l~~~i~~ii~~L~~~Le~ksk  401 (571)
T 2pft_A          340 SNAILFLQQLLDFQETAGAMLASQETSSSAT--------SY----------SSEFSKRLLSTYICKVLGNLQLNLLSKSK  401 (571)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHTTC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccCCCcccc--------cC----------CCCCcccHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999998764332100        00          01123568999999999999999999999


Q ss_pred             cCCCchhhHHHHhhhHHHHHHhhhCchhhhhhhc---hhHHHHHHHHHHHHHHHHHHhhHHHHHHhhcccCcCC---Cc-
Q 039020          311 LYRDPALRYVFLMNNGRYILQKIKGSNEIHNMMG---VTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQA---NG-  383 (481)
Q Consensus       311 ~y~d~~L~~iFLmNN~~yI~~~~~~s~~l~~lLg---~~w~~~~~~~~~~~~~~Y~~~sW~~vl~~L~~~~~~~---~~-  383 (481)
                      .|+|++|++||||||+|||++++++| +|..+||   ++|++++..++++|++.| +++|++|+++|.+++.+.   ++ 
T Consensus       402 ~y~d~~l~~iFLmNN~~yI~~~v~~s-~l~~llg~~~~~~~~~~~~~i~~~~~~Y-~~sW~~v~~~L~~~~~~~~~~g~~  479 (571)
T 2pft_A          402 VYEDPALSAIFLHNNYNYILKSLEKS-ELIQLVAVTQKTAERSYREHIEQQIQTY-QRSWLKVTDYIAEKNLPVFQPGVK  479 (571)
T ss_dssp             TCSSHHHHHHHHHHHHHHHHTTTTTS-THHHHHHTTCTTHHHHHHHHHHHHHHHH-HGGGHHHHTTTSGGGSCSSCCCSC
T ss_pred             hCCchHHHHHHHHhhHHHHHHHHhcc-chHHHhCcchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhccCCcCCCCCC
Confidence            99999999999999999999999987 8999999   689999999999999999 899999999999876432   22 


Q ss_pred             --cccHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHhHHHHHHHHHHhhhcccCCCCCcccccCHHHH
Q 039020          384 --KVVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDI  461 (481)
Q Consensus       384 --~~~r~~iKekf~~FN~~Fee~~~~q~~w~VpD~~LR~~Lr~~i~~~v~PaY~~F~~ky~~~~~~k~~~KyiKytpe~l  461 (481)
                        ..+|+.+||||++||.+|||+|++|+.|+||||+||++||.+|.++|+|+|++||+||++..|+||++||||||||+|
T Consensus       480 ls~~~r~~iKe~fk~Fn~~Fee~~~~q~~w~VpD~~LR~~Lr~~i~~~v~paY~~F~~r~~~~~~~k~~~KyiKytpe~l  559 (571)
T 2pft_A          480 LRDKERQMIKERFKGFNDGLEELCKIQKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTKNPEKYIKYRVEQV  559 (571)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSCHHHHCCCCHHHH
T ss_pred             cCcccHHHHHHHHHHHHHHHHHHHHhCCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcccCCCCCccccCHHHH
Confidence              247899999999999999999999999999999999999999999999999999999999888999999999999999


Q ss_pred             HHHHHHhhCCCC
Q 039020          462 ETLIDELFDGNP  473 (481)
Q Consensus       462 e~~l~~LF~g~~  473 (481)
                      |++|++||+|+.
T Consensus       560 e~~L~~LFeg~a  571 (571)
T 2pft_A          560 GDMIDRLFDTSA  571 (571)
T ss_dssp             HHHHHTSSSCC-
T ss_pred             HHHHHHHhCCCC
Confidence            999999999963

PyMOL of 2pft

>2b1e_A Exocyst complex component EXO70; tethering complex, endocytosis/exocytosis complex; 2.00A {Saccharomyces cerevisiae} PDB: 2b7m_A 2pfv_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		481
d2b7ma1		551	a.118.17.2 (A:73-623) Exocyst complex component EX	1e-126

>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 551	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO70
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  375 bits (964), Expect = e-126
 Identities = 76/476 (15%), Positives = 171/476 (35%), Gaps = 42/476 (8%)

Query: 18  SNEDEGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITI 77
             +   FP +  + +  ++ I          +         R     + +  L   +  I
Sbjct: 93  ITKKMPFPYYEDQQLGALSWILDYFHGNSEGSIIQDILVGERSKLILKCMAFLEPFAKEI 152

Query: 78  DDAHRMQWESLEREIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVI 137
             A    +E     + S+              E+   D ++S+Y  +   + S++ + +I
Sbjct: 153 STAKNAPYEKGSSGMNSYTEALLG----FIANEKSLVDDLYSQYTESKPHVLSQILSPLI 208

Query: 138 TPFLSFSEVIALTKRSA--ERLFKFLDMCETLNDLLTTIDDSYSKEISQDLTSEIAVVKS 195
           + +           RS      F   ++ E++ND+  ++             + +     
Sbjct: 209 SAYAKLFGANLKIVRSNLENFGFFSFELVESINDVKKSLRGKEL-----QNYNLLQDCTQ 263

Query: 196 QLAEAAASIFCELENSIKSDQGRTPV--PSGQVHPSTRYTMNYLKYACEYRDTLEEVFRF 253
           ++ +   S+F +  + I            +  V  +T  TM+ L+   EY++        
Sbjct: 264 EVRQVTQSLFRDAIDRIIKKANSISTIPSNNGVTEATVDTMSRLRKFSEYKNGCLGAMDN 323

Query: 254 HHKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSRLYR 313
                   +     N+   E+  +    +        +  +   +D L  NLE K+++  
Sbjct: 324 IT-----RENWLPSNYKEKEYTLQNEALNWEDHNVLLSCFISDCIDTLAVNLERKAQIAL 378

Query: 314 DPALRY-----------------VFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLR 356
            P                      F++ N   + Q ++ S E++ M+       R  +L+
Sbjct: 379 MPNQEPDVANPNSSKNKHKQRIGFFILMNLTLVEQIVEKS-ELNLMLAGEG-HSRLERLK 436

Query: 357 QYHKNYQRETWSRVLQCISHEGLQANGK---VVKAVLKERFKNFNALFEEIHRTQSTWVV 413
           + + +Y    W  +   +       +       K  +KE+F+ FN  FE++      + +
Sbjct: 437 KRYISYMVSDWRDLTANLMDSVFIDSSGKKSKDKEQIKEKFRKFNEGFEDLVSKTKQYKL 496

Query: 414 SDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETLIDELF 469
           SD  L+  L+  I ++V P Y  F  R+K     ++  K+IKY P+++ T++++L 
Sbjct: 497 SDPSLKVTLKSEIISLVMPMYERFYSRYKDS--FKNPRKHIKYTPDELTTVLNQLV 550

PyMOL of d2b7ma1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		481
d2b7ma1		551	Exocyst complex component EXO70 {Baker's yeast (Sa	100.0

>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO70
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.1e-89  Score=727.98  Aligned_cols=440  Identities=17%  Similarity=0.235  Sum_probs=358.4

Q ss_pred             cccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCchHHHHHHHHHhHHHHHHHHHhcCCCCCChhHhhhcChHhHH
Q 039020           10 CLLPDSTESNEDEGFPNFSTEAISNMNKIATAMISCGYEAECCMAYTCFRRNAFREVLNKLGFDSITIDDAHRMQWESLE   89 (481)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~~L~~L~~~~~~~~~v~~~~~e~~~   89 (481)
                      -++|.++. +++.+||.+|++++.+|+.||++|.++|+.++|+++|+++|+.++.+||+.|+.+..+++++++++|++++
T Consensus        86 p~~p~~~~-~k~~~~p~~~~~~~~~L~~Ia~~l~~~~~~~~~~~iY~~~R~~~l~~sL~~L~~~~~s~~~~~~~~y~~~~  164 (551)
T d2b7ma1          86 PFDPQINI-TKKMPFPYYEDQQLGALSWILDYFHGNSEGSIIQDILVGERSKLILKCMAFLEPFAKEISTAKNAPYEKGS  164 (551)
T ss_dssp             CCCTHHHH-HTCCCCCCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTTTGGGGCC------------C
T ss_pred             CCCchhhh-ccCCCCCCCCHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhccCchhhhh
Confidence            36677776 89999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHhhchhhHhHHhhhcCCCCcchHHHHHHHHHHHHHHHHhhHHHHHhh-cc-chHHHHHHhhHHHHH
Q 039020           90 REIGSWISIFKHCYRNLFPGERKFSDAIFSEYPSTSQRLFSELAAAVITPFLSFSEVIALT-KR-SAERLFKFLDMCETL  167 (481)
Q Consensus        90 ~~I~~wi~a~~~~~~~l~~~E~~L~~~vf~~~~~~~~~~f~~i~~~~i~~ll~f~~~ia~~-~r-~peklf~lLdm~e~L  167 (481)
                      ++|..|++|++    .+|++|++||++||+..+..+..||.+++++++..++.|+++++.. ++ .++++|.+||||++|
T Consensus       165 ~~i~~~~~av~----~l~~~E~~l~~~if~~~~~~~~~~f~~i~~~~i~~~~~~~~~i~~~~k~~~~~~~f~~ld~~e~l  240 (551)
T d2b7ma1         165 SGMNSYTEALL----GFIANEKSLVDDLYSQYTESKPHVLSQILSPLISAYAKLFGANLKIVRSNLENFGFFSFELVESI  240 (551)
T ss_dssp             CHHHHHHHHHH----HHHHHHHHHHHHHCSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHTTHHHHHHHHH
T ss_pred             HHHHHHHHHHH----HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Confidence            99999999887    7999999999999998777889999999999999999999998743 33 477889999999999


Q ss_pred             HhhHhhhhhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC-C-CCCCccccHHHHHHHHHHHHhcHH
Q 039020          168 NDLLTTIDDSYSKEISQDLTSEIAVVKSQLAEAAASIFCELENSIKSDQGRTP-V-PSGQVHPSTRYTMNYLKYACEYRD  245 (481)
Q Consensus       168 ~~~~p~~~~lf~~~~~~~~~~~~~~~~~~L~~~~~~~f~ef~~~I~~~~~~~~-~-~dg~Vh~lT~~vm~yl~~L~~y~~  245 (481)
                      .++.|.++....     +.+..+.+++++|+++++.+|+||.+.|+.+.++.+ + +||||||+|++||+||+.|++|++
T Consensus       241 ~~l~~~~~~~~~-----~~~~~~~~~l~~L~~~~~~~f~ef~~~i~~~~~~~~~lP~dG~Vh~lT~~vm~yL~~L~eY~~  315 (551)
T d2b7ma1         241 NDVKKSLRGKEL-----QNYNLLQDCTQEVRQVTQSLFRDAIDRIIKKANSISTIPSNNGVTEATVDTMSRLRKFSEYKN  315 (551)
T ss_dssp             HHHHHHHTTSCC-----SCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCSCCTTSCCCHHHHHHHHHHHHHHTTHH
T ss_pred             HHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcCCCCCCcChhHHHHHHHHHHHHhhHH
Confidence            999999986433     345678899999999999999999999999877654 3 599999999999999999999999


Q ss_pred             HHHHHHhhc-cCCCCCCCCCCCCccccccccccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHhccCCCchhhH-----
Q 039020          246 TLEEVFRFH-HKNEGFDDAPNQENHDINEHLTEMPNDDGTPKKSPFAIELIAVMDLLDANLEMKSRLYRDPALRY-----  319 (481)
Q Consensus       246 ~l~~il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~ksk~y~d~~L~~-----  319 (481)
                      +|..+|... .++|.....+.. ...     ...+..+++++..+|+.|+.++|++|+.|||+|||.|+||+|++     
T Consensus       316 ~l~~il~~~~~~~w~~~~~~~~-~~~-----~~~~~~~~~~~~~~ls~~i~~vi~~L~~nLe~kak~y~d~~l~~~~~~~  389 (551)
T d2b7ma1         316 GCLGAMDNITRENWLPSNYKEK-EYT-----LQNEALNWEDHNVLLSCFISDCIDTLAVNLERKAQIALMPNQEPDVANP  389 (551)
T ss_dssp             HHHHTTTTCCGGGGSCSSCCGG-GSC-----CCCCCSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCSCT
T ss_pred             HHHHHHHhcccCCCCcccccCC-Ccc-----ccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhhccccc
Confidence            999999874 667865422211 000     01111223445668999999999999999999999999888876     


Q ss_pred             ------------HHHhhhHHHHHHhhhCchhhhhhhchhHHHHHHHHHHHHHHHHHHhhHHHHHHhhcccCcCCC---cc
Q 039020          320 ------------VFLMNNGRYILQKIKGSNEIHNMMGVTWCRKRSTQLRQYHKNYQRETWSRVLQCISHEGLQAN---GK  384 (481)
Q Consensus       320 ------------iFLmNN~~yI~~~~~~s~~l~~lLg~~w~~~~~~~~~~~~~~Y~~~sW~~vl~~L~~~~~~~~---~~  384 (481)
                                  ||||||+|||++++++| +|..+||++|++++.+.++++ ..|++++|++|+++|.+++...+   +.
T Consensus       390 ~~~~~~~~~~~~iFlmNN~~yI~~~v~~S-eL~~lLg~~~~~~~~~~~~~~-~~y~~~~W~~v~~~L~d~~~~~~~~~~s  467 (551)
T d2b7ma1         390 NSSKNKHKQRIGFFILMNLTLVEQIVEKS-ELNLMLAGEGHSRLERLKKRY-ISYMVSDWRDLTANLMDSVFIDSSGKKS  467 (551)
T ss_dssp             TCSSCCCHHHHHHHHHHHHHHHHHHHHTS-HHHHHHTTHHHHHHHHHHHHH-HHHHTHHHHHHHHHTC------------
T ss_pred             ccccccchhhhhHHHHhhHHHHHHHHHhh-hHHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcccCCCCCCCC
Confidence                        99999999999999987 899999999999987655555 56889999999999988754322   23


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHhHHHHHHHHHHhhhcccCCCCCcccccCHHHHHHH
Q 039020          385 VVKAVLKERFKNFNALFEEIHRTQSTWVVSDEQLQSELRVSISAVVTPAYRSFVGRFKQYLEGRSMDKYIKYQPEDIETL  464 (481)
Q Consensus       385 ~~r~~iKekf~~FN~~Fee~~~~q~~w~VpD~~LR~~Lr~~i~~~v~PaY~~F~~ky~~~~~~k~~~KyiKytpe~le~~  464 (481)
                      .+|++|||||++||++|||+|++|++|+||||+||+.||.+|+++|+|+|++||+||+  .|+|||+|||||||++||++
T Consensus       468 k~k~~iKekFk~FN~~Fee~~~~q~~~~i~D~~LR~~L~~~i~~~v~p~Y~~F~~ry~--~~~k~~~KyiKY~p~~le~~  545 (551)
T d2b7ma1         468 KDKEQIKEKFRKFNEGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFYSRYK--DSFKNPRKHIKYTPDELTTV  545 (551)
T ss_dssp             --------------CHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSSCSTTTCCCCHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhCCccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCCCCCceeccCHHHHHHH
Confidence            5889999999999999999999999999999999999999999999999999999997  47899999999999999999


Q ss_pred             HHHhh
Q 039020          465 IDELF  469 (481)
Q Consensus       465 l~~LF  469 (481)
                      |++||
T Consensus       546 L~~L~  550 (551)
T d2b7ma1         546 LNQLV  550 (551)
T ss_dssp             HHTCC
T ss_pred             HHHHc
Confidence            99997

PyMOL of d2b7ma1