Citrus Sinensis ID: 039285


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810---
MPSFAAPTNLLPSTTTPSTFSRRKFSSTPSPSSVNPRASSTSIQCNSSNPLNPSRPSSLQNPNSKRNKQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGFGGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY
ccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccEEcccccccccEEEEEEEEEEccccccccccccEEEEEEEcccccccHHHHHHHHHHHHccccEEEEEEEEEccccccccEEEEEEEccccccEEEEEEEEEEEcccccEEEEccccccEEEEEEEccccccEEEEcccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccEEEEEEEEEEEEEEEEEEEccccccccccccEEEEEEccccccccccccHHHHHHHHHHHHccccccccEEEccccccccccEEEEEEEEEEEccEEEEEEEEEcccccccccccccccccEEEEEEEccccccccEEEEEEEEcccccccccEEEEEEEEcccccccccccccEEEEEEEEcccccccccccccccccccEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccEEEEEEEEccccccccccEEEEEEEEEEEEEccccccccccccccEEEEEEEEcEEEccccccccEEccccccccccccccccccEEEEEEEEEEEEEEcccEEEEEEEcccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEcccccEEEEEEccccc
cccEEccccccccccccccccHHHccccccccccccccccccEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHccccHHHccccccccccccccccccccccccccccccEEEEEEEEEEcccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccccccccccHHEEEEEEEcccccccEEEEEEEEEEEcccEEEEccccccEEEEEEEEEcccEEEEEEEEEccccccHHHHHHHHHHcccccEccHHHHHHHHHHHHHHHHcccEEEEEEEccccccccEEEEEEEEccccEEEEEEEEcccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccEEEEEcccccccccEEEEEEEEEEccccEEEEEEEEEcccccEEcccccccccEEEEEEEEccccccccEEEEEEEEcccccccccEEEEEEccccccccccccccEEEEEEcccccccccEEccccccccccccEEEEEccEEEEEEEcccccEEEEEEEEEEEEEEcccccccccccEEcccccccccccccEEcccccccEEEEEEEEEEcccccccccccccEEEEEEEEEEEcccccEEEEEEEEEEEEEEEccccccccccccccEEEEEcccccccccccccHHEEccccccEccccccccccccEEEEEEEEEEEccccEEEEEEEEcccccccccccccccccccccccccEEEEEEcccccEEEEEEcEcccccEEEEEEEcccc
mpsfaaptnllpstttpstfsrrkfsstpspssvnprasstsiqcnssnplnpsrpsslqnpnskrnkQHILKSLTKPLAVASFASATIFIrltpvlgggsggdgfggggggggdgfggggFWRKVFGTElaiadednesqdwdahglpanIAVQLSKLSGFRKYKLSEILffdrqrgatvgtedSFFEMvslrpggvytRTQLLKELETLATcgmfekvdmeaktkpdgtlgLTISFLESTWQSAERIRCINVglmqqskpiemdadMTEREKLEYYQSQEKDYKRRidkarpcllpqsVHNEILQILKDHGKVSARLLQRIRDRVQKwyhdegyaCAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRelpkqlrqgnvfNIEAGKQALRNInslslfsnievnprpdekneggIIVEIKLKELDQKSAEVSAewslvpgrggrptfaslqpggtvsfehrnlqglnrsilgsvttsnflnpqddlaFKLEyvhpyldgvynprnrtfrascfnsrklspvftggpgvdevpaiwvdraglkanitenftrqskfTYGLVMEEittrdesshisphgqrvlpsggisadgppttlsgtgiDRMAFLqgnitrdntkfvngaivgernvfqvdqglgigskfpffnrhqltltrffqlkqveegankppppvlvlhghyggcvgdlpsydaftlggpysvrgynmgeLGAARNILELGAeiripvkntHVYAFVEhgndlgsskdvkgnptevyrrmghgssygvgaKLGLVRAEYavdhntgtgaLFFRFGERY
mpsfaaptnllpstttpstfsrrkfsstpspssvnprASSTSIQCNSSNPLNPSRPSSLQNPNSKRNKQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGFGGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEIlffdrqrgatvGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQlavvkrelpkqlrqgnVFNIEAGKQALRNinslslfsnievnprpdeknegGIIVEIKLKELDQKSAEVSAEwslvpgrggrptFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRklspvftggpgvdEVPAIWVDRAGLkanitenftrqskftYGLVMEEITTrdesshisphGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVehgndlgsskdvKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY
MPSFAAptnllpstttpstfsrrkfsstpspssvnpRASSTSIQCnssnplnpsrpsslqnpnsKRNKQHILKSLTKPLAVASFASATIFIRLTPVLgggsggdgfggggggggdgfggggfWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY
************************************************************************KSLTKPLAVASFASATIFIRLTPV**********************GGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLM*******************************IDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNIE***********GIIVEIKLKE***********WSLV****************TVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEI*********************************TGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEG*****PPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGND*************VYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRF****
***************************************************************************TKPLAVASFASATIFIRL*********************DGFGGGGFWRKVFGTELA******************NIAVQLSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNIEVNP*****NEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY
MPSFAAPTNLLPSTT*****************************************************QHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGFGGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELD********EWSLVPGRGGRPTFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITT************RVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY
*******************************************************************KQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGFGGGGFWRKVFGTELAIA******Q*WDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPSFAAPTNLLPSTTTPSTFSRRKFSSTPSPSSVNPRASSTSIQCNSSNPLNPSRPSSLQNPNSKRNKQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGFGGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query813 2.2.26 [Sep-21-2011]
Q9STE8818 Protein TOC75-3, chloropl yes no 0.985 0.979 0.778 0.0
Q43715809 Protein TOC75, chloroplas N/A no 0.852 0.856 0.799 0.0
Q84Q83817 Protein TOC75, chloroplas yes no 0.849 0.845 0.725 0.0
Q5IZC8396 Protein TOC75-4, chloropl no no 0.484 0.994 0.653 1e-148
A2X208665 Outer envelope protein 80 N/A no 0.616 0.753 0.246 9e-23
Q9C5J8732 Outer envelope protein 80 no no 0.621 0.689 0.233 3e-19
Q6H7M7665 Outer envelope protein 80 no no 0.616 0.753 0.241 2e-18
>sp|Q9STE8|TC753_ARATH Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1 Back     alignment and function desciption
 Score = 1262 bits (3266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/830 (77%), Positives = 716/830 (86%), Gaps = 29/830 (3%)

Query: 1   MPSFAAPTNLLPSTTTPSTFS----RRKFSSTPSPSSVNPRASSTS-----IQCNSSNPL 51
           M +F+    L+P+ T+ +  +    RRKF S PS S + PR S+ S     I+C+ S P 
Sbjct: 1   MAAFSVNGQLIPTATSSTASTSLSSRRKFLS-PSSSRL-PRISTQSPRVPSIKCSKSLPN 58

Query: 52  NPSRPSSLQNPNSKRNKQHILKSLTKPLAVASFASATIFI-----RLTPVL---GGGSGG 103
             +  SS         K  +LK+L KPLAVAS +SA  F       L  VL   GGG  G
Sbjct: 59  RDTETSS---------KDSLLKNLAKPLAVASVSSAASFFLFRISNLPSVLTGGGGGGDG 109

Query: 104 DGFGGGGGGGGDGFGGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFR 163
           +  G GGGGGG     GGFW K+F    A+ADE+ +S DWD+HGLPANI VQL+KLSGF+
Sbjct: 110 NFGGFGGGGGGGDGNDGGFWGKLFSPSPAVADEE-QSPDWDSHGLPANIVVQLNKLSGFK 168

Query: 164 KYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDME 223
           KYK+S+I+FFDR+R  T+GTEDSFFEMVS+RPGGVYT+ QL KELETLATCGMFEKVD+E
Sbjct: 169 KYKVSDIMFFDRRRQTTIGTEDSFFEMVSIRPGGVYTKAQLQKELETLATCGMFEKVDLE 228

Query: 224 AKTKPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEK 283
            KTKPDGTLG+TISF ESTWQSA+R RCINVGLM QSKPIEMD+DMT++EKLEYY+S EK
Sbjct: 229 GKTKPDGTLGVTISFAESTWQSADRFRCINVGLMVQSKPIEMDSDMTDKEKLEYYRSLEK 288

Query: 284 DYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVN 343
           DYKRRID+ARPCLLP  V+ E++Q+L+D GKVSARLLQRIRDRVQKWYHDEGYACAQVVN
Sbjct: 289 DYKRRIDRARPCLLPAPVYGEVMQMLRDQGKVSARLLQRIRDRVQKWYHDEGYACAQVVN 348

Query: 344 FGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEA 403
           FGNLNT+EVVCEVVEGDITQLV+QFQDKLGNVVEGNTQ+ VV+RELPKQLRQG VFNIEA
Sbjct: 349 FGNLNTKEVVCEVVEGDITQLVIQFQDKLGNVVEGNTQVPVVRRELPKQLRQGYVFNIEA 408

Query: 404 GKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGR 463
           GK+AL NINSL LFSNIEVNPRPDEKNEGGIIVEIKLKEL+QKSAEVS EWS+VPGRGG 
Sbjct: 409 GKKALSNINSLGLFSNIEVNPRPDEKNEGGIIVEIKLKELEQKSAEVSTEWSIVPGRGGA 468

Query: 464 PTFASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPR 523
           PT AS QPGG+V+FEHRNLQGLNRS++GSVTTSNFLNPQDDL+FKLEYVHPYLDGVYNPR
Sbjct: 469 PTLASFQPGGSVTFEHRNLQGLNRSLMGSVTTSNFLNPQDDLSFKLEYVHPYLDGVYNPR 528

Query: 524 NRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEI 583
           NRTF+ SCFNSRKLSPVFTGGPGV+EVP IWVDRAG+KANITENFTRQSKFTYGLVMEEI
Sbjct: 529 NRTFKTSCFNSRKLSPVFTGGPGVEEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEI 588

Query: 584 TTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVG 643
           TTRDESSHI+ +GQR+LPSGGISADGPPTTLSGTG+DRMAFLQ NITRDNTKFVNGA+VG
Sbjct: 589 TTRDESSHIAANGQRLLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVG 648

Query: 644 ERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGD 703
           +R VFQVDQGLGIGSKFPFFNRHQLT+T+F QL++VE+GA K PPPVLVLHGHYGGCVGD
Sbjct: 649 QRTVFQVDQGLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGD 708

Query: 704 LPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKD 763
           LPSYDAF LGGPYSVRGYNMGELGAARNI E+GAEIRIPVKNTHVYAFVEHGNDLGSSKD
Sbjct: 709 LPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKD 768

Query: 764 VKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 813
           VKGNPT VYRR G GSSYG G KLGLVRAEYAVDHN GTGALFFRFGERY
Sbjct: 769 VKGNPTAVYRRTGQGSSYGAGVKLGLVRAEYAVDHNNGTGALFFRFGERY 818




Essential protein. Mediates the insertion of proteins targeted to the outer membrane of chloroplasts (By similarity). Required for the import of protein precursors into chloroplasts. Forms the voltage-dependent preprotein translocation channels (hydrophilic beta barrel) of the TOC complex in the chloroplastic outer membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q43715|TOC75_PEA Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1 Back     alignment and function description
>sp|Q84Q83|TOC75_ORYSJ Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2 Back     alignment and function description
>sp|Q5IZC8|TC754_ARATH Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1 Back     alignment and function description
>sp|A2X208|OEP80_ORYSI Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1 Back     alignment and function description
>sp|Q9C5J8|OEP80_ARATH Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1 Back     alignment and function description
>sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query813
255559014815 sorting and assembly machinery (sam50) p 0.985 0.982 0.807 0.0
224057882813 predicted protein [Populus trichocarpa] 0.981 0.981 0.804 0.0
225434863808 PREDICTED: protein TOC75-3, chloroplasti 0.988 0.995 0.789 0.0
147860006784 hypothetical protein VITISV_006765 [Viti 0.964 1.0 0.774 0.0
297819256817 translocon outer membrane complex 75-III 0.987 0.982 0.782 0.0
15232625818 protein TOC75-3 [Arabidopsis thaliana] g 0.985 0.979 0.778 0.0
449470920809 PREDICTED: protein TOC75-3, chloroplasti 0.985 0.990 0.760 0.0
356557408794 PREDICTED: protein TOC75-3, chloroplasti 0.846 0.866 0.843 0.0
356550301800 PREDICTED: protein TOC75-3, chloroplasti 0.837 0.851 0.851 0.0
357472869804 Protein TOC75 [Medicago truncatula] gi|3 0.849 0.859 0.804 0.0
>gi|255559014|ref|XP_002520530.1| sorting and assembly machinery (sam50) protein, putative [Ricinus communis] gi|223540372|gb|EEF41943.1| sorting and assembly machinery (sam50) protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1314 bits (3401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/827 (80%), Positives = 730/827 (88%), Gaps = 26/827 (3%)

Query: 1   MPSFAAPTNLLPSTTTPSTFSRRKFSSTPSPSSVNPRASSTSIQCN-SSNPLNPSRPSSL 59
           MPSFAAPTNL+  T TP + S R+ S   S  +  PRASS   +C+ SS+  + S  SS 
Sbjct: 1   MPSFAAPTNLI--TNTPLSSSSRRKSLASSTGT--PRASS--FKCDLSSSSSSSSSSSSQ 54

Query: 60  QNPNSKRNKQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGF-- 117
           QNP   +    +LK+LTKPLAVAS  +A++F+RLTP+    SGG   GG  GG G G   
Sbjct: 55  QNP---KPHNSLLKTLTKPLAVAS--AASLFLRLTPIPSPFSGGGNNGGDWGGRGGGGGG 109

Query: 118 -----------GGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYK 166
                      GG GFW K+F    AIADE ++S+D+D+HGLPANI VQL+KLSGF+KYK
Sbjct: 110 GGENNFNGGEAGGDGFWNKLFQPAPAIADE-SQSKDFDSHGLPANIVVQLNKLSGFKKYK 168

Query: 167 LSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKT 226
           LS+I+FFDR+R  TVG++DSFFEMVSLRPGG YT+ QL KELETLA+CGMFEKVDME KT
Sbjct: 169 LSDIVFFDRRRYTTVGSQDSFFEMVSLRPGGTYTKAQLQKELETLASCGMFEKVDMEGKT 228

Query: 227 KPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYK 286
            PDGTLG+TISF ESTWQSA++ RCINVGLMQQSKPIEMD DMT++EKLEYY+SQEKDYK
Sbjct: 229 NPDGTLGITISFTESTWQSADKFRCINVGLMQQSKPIEMDPDMTDKEKLEYYRSQEKDYK 288

Query: 287 RRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGN 346
           RRI+KARPCLLP SV+ E+LQ+L+D GKVSARLLQ+IRDRVQKWYHDEGYACAQVVNFGN
Sbjct: 289 RRIEKARPCLLPASVNREVLQMLRDQGKVSARLLQKIRDRVQKWYHDEGYACAQVVNFGN 348

Query: 347 LNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQ 406
           LNT+EVVCEVVEGDITQ+V+Q+QDKLGNVVEGNTQL VVKRELPKQLRQG VFNIEAGKQ
Sbjct: 349 LNTKEVVCEVVEGDITQMVIQYQDKLGNVVEGNTQLPVVKRELPKQLRQGQVFNIEAGKQ 408

Query: 407 ALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTF 466
           ALRNINSL+LFSNIEVNPRPDEKNEGGIIVEIKLKEL+ KSAEVS EWS+VPGRGGRPT 
Sbjct: 409 ALRNINSLALFSNIEVNPRPDEKNEGGIIVEIKLKELEPKSAEVSTEWSIVPGRGGRPTL 468

Query: 467 ASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRT 526
           AS QPGGTVSFEHRN++GLNRSILGS+TTSNF  PQDDLAFKLEYVHPYLDGVYNPRNRT
Sbjct: 469 ASFQPGGTVSFEHRNIKGLNRSILGSITTSNFFLPQDDLAFKLEYVHPYLDGVYNPRNRT 528

Query: 527 FRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTR 586
            RASCFNSRKLSPVFTGGPGVDEVP IWVDRAGLKANITENFTRQSKFTYG+VMEEITTR
Sbjct: 529 LRASCFNSRKLSPVFTGGPGVDEVPPIWVDRAGLKANITENFTRQSKFTYGIVMEEITTR 588

Query: 587 DESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERN 646
           DESSHIS +GQRVLPSGGISADGPPTTLSGTGIDRMAFLQ NITRDNTKFVNGA+VGERN
Sbjct: 589 DESSHISANGQRVLPSGGISADGPPTTLSGTGIDRMAFLQANITRDNTKFVNGAVVGERN 648

Query: 647 VFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPS 706
           VFQVDQGLGIGSKFPFFNRHQLT+TRF  L QVEEGA KPPPPVLVL+GHYGGCVGDLPS
Sbjct: 649 VFQVDQGLGIGSKFPFFNRHQLTITRFIPLTQVEEGAGKPPPPVLVLNGHYGGCVGDLPS 708

Query: 707 YDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKG 766
           YDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPV+NTHVYAF EHGNDLG+SKDVKG
Sbjct: 709 YDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVRNTHVYAFAEHGNDLGTSKDVKG 768

Query: 767 NPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 813
           NPTEVYRRMGHGSSYGVG KLGLVRAEYAVDHNTGTG++FFRFGERY
Sbjct: 769 NPTEVYRRMGHGSSYGVGVKLGLVRAEYAVDHNTGTGSIFFRFGERY 815




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057882|ref|XP_002299371.1| predicted protein [Populus trichocarpa] gi|222846629|gb|EEE84176.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225434863|ref|XP_002280661.1| PREDICTED: protein TOC75-3, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147860006|emb|CAN81047.1| hypothetical protein VITISV_006765 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297819256|ref|XP_002877511.1| translocon outer membrane complex 75-III [Arabidopsis lyrata subsp. lyrata] gi|297323349|gb|EFH53770.1| translocon outer membrane complex 75-III [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232625|ref|NP_190258.1| protein TOC75-3 [Arabidopsis thaliana] gi|75207662|sp|Q9STE8.1|TC753_ARATH RecName: Full=Protein TOC75-3, chloroplastic; AltName: Full=75 kDa translocon at the outer-envelope-membrane of chloroplasts 3; Short=AtTOC75-III; Flags: Precursor gi|5541685|emb|CAB51191.1| chloroplast import-associated channel homolog [Arabidopsis thaliana] gi|22022564|gb|AAM83239.1| AT3g46740/T6H20_230 [Arabidopsis thaliana] gi|30102496|gb|AAP21166.1| At3g46740/T6H20_230 [Arabidopsis thaliana] gi|332644678|gb|AEE78199.1| protein TOC75-3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449470920|ref|XP_004153150.1| PREDICTED: protein TOC75-3, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356557408|ref|XP_003547008.1| PREDICTED: protein TOC75-3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356550301|ref|XP_003543526.1| PREDICTED: protein TOC75-3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357472869|ref|XP_003606719.1| Protein TOC75 [Medicago truncatula] gi|355507774|gb|AES88916.1| Protein TOC75 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query813
TAIR|locus:2102767818 TOC75-III "translocon at the o 0.917 0.911 0.806 0.0
TAIR|locus:2122328396 TOC75-IV "translocon at the ou 0.467 0.959 0.667 3.8e-142
TAIR|locus:2007606399 TOC75-I "translocon outer memb 0.232 0.473 0.607 9.3e-113
TAIR|locus:2183164732 OEP80 "outer envelope protein 0.182 0.202 0.323 2.1e-21
TAIR|locus:2081423362 AT3G44160 "AT3G44160" [Arabido 0.274 0.616 0.320 1.5e-16
TAIR|locus:2102767 TOC75-III "translocon at the outer envelope membrane of chloroplasts 75-III" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3210 (1135.0 bits), Expect = 0., P = 0.
 Identities = 609/755 (80%), Positives = 667/755 (88%)

Query:    67 NKQHILKSLTKPLAVASFASATIFI-----RLTPVLXXXXXXXXXXXXXXXXXXXXXXXX 121
             +K  +LK+L KPLAVAS +SA  F       L  VL                        
Sbjct:    65 SKDSLLKNLAKPLAVASVSSAASFFLFRISNLPSVLTGGGGGGDGNFGGFGGGGGGGDGN 124

Query:   122 X---WRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRG 178
                 W K+F    A+ADE+ +S DWD+HGLPANI VQL+KLSGF+KYK+S+I+FFDR+R 
Sbjct:   125 DGGFWGKLFSPSPAVADEE-QSPDWDSHGLPANIVVQLNKLSGFKKYKVSDIMFFDRRRQ 183

Query:   179 ATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISF 238
              T+GTEDSFFEMVS+RPGGVYT+ QL KELETLATCGMFEKVD+E KTKPDGTLG+TISF
Sbjct:   184 TTIGTEDSFFEMVSIRPGGVYTKAQLQKELETLATCGMFEKVDLEGKTKPDGTLGVTISF 243

Query:   239 LESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLP 298
              ESTWQSA+R RCINVGLM QSKPIEMD+DMT++EKLEYY+S EKDYKRRID+ARPCLLP
Sbjct:   244 AESTWQSADRFRCINVGLMVQSKPIEMDSDMTDKEKLEYYRSLEKDYKRRIDRARPCLLP 303

Query:   299 QSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVE 358
               V+ E++Q+L+D GKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNT+EVVCEVVE
Sbjct:   304 APVYGEVMQMLRDQGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTKEVVCEVVE 363

Query:   359 GDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFS 418
             GDITQLV+QFQDKLGNVVEGNTQ+ VV+RELPKQLRQG VFNIEAGK+AL NINSL LFS
Sbjct:   364 GDITQLVIQFQDKLGNVVEGNTQVPVVRRELPKQLRQGYVFNIEAGKKALSNINSLGLFS 423

Query:   419 NIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFE 478
             NIEVNPRPDEKNEGGIIVEIKLKEL+QKSAEVS EWS+VPGRGG PT AS QPGG+V+FE
Sbjct:   424 NIEVNPRPDEKNEGGIIVEIKLKELEQKSAEVSTEWSIVPGRGGAPTLASFQPGGSVTFE 483

Query:   479 HRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLS 538
             HRNLQGLNRS++GSVTTSNFLNPQDDL+FKLEYVHPYLDGVYNPRNRTF+ SCFNSRKLS
Sbjct:   484 HRNLQGLNRSLMGSVTTSNFLNPQDDLSFKLEYVHPYLDGVYNPRNRTFKTSCFNSRKLS 543

Query:   539 PVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQR 598
             PVFTGGPGV+EVP IWVDRAG+KANITENFTRQSKFTYGLVMEEITTRDESSHI+ +GQR
Sbjct:   544 PVFTGGPGVEEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEITTRDESSHIAANGQR 603

Query:   599 VLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGS 658
             +LPSGGISADGPPTTLSGTG+DRMAFLQ NITRDNTKFVNGA+VG+R VFQVDQGLGIGS
Sbjct:   604 LLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVGQRTVFQVDQGLGIGS 663

Query:   659 KFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSV 718
             KFPFFNRHQLT+T+F QL++VE+GA K PPPVLVLHGHYGGCVGDLPSYDAF LGGPYSV
Sbjct:   664 KFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSV 723

Query:   719 RGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHG 778
             RGYNMGELGAARNI E+GAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPT VYRR G G
Sbjct:   724 RGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQG 783

Query:   779 SSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 813
             SSYG G KLGLVRAEYAVDHN GTGALFFRFGERY
Sbjct:   784 SSYGAGVKLGLVRAEYAVDHNNGTGALFFRFGERY 818




GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA
GO:0010006 "Toc complex" evidence=ISS
GO:0009658 "chloroplast organization" evidence=ISS;RCA;IMP
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0045036 "protein targeting to chloroplast" evidence=IDA
GO:0031359 "integral to chloroplast outer membrane" evidence=IDA
GO:0048598 "embryonic morphogenesis" evidence=IMP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0045037 "protein import into chloroplast stroma" evidence=IMP
GO:0048481 "ovule development" evidence=RCA
GO:0009536 "plastid" evidence=IDA
TAIR|locus:2122328 TOC75-IV "translocon at the outer envelope membrane of chloroplasts 75-IV" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007606 TOC75-I "translocon outer membrane complex 75-I" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183164 OEP80 "outer envelope protein of 80 kDa" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081423 AT3G44160 "AT3G44160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84Q83TOC75_ORYSJNo assigned EC number0.72550.84990.8457yesno
Q43715TOC75_PEANo assigned EC number0.79970.85230.8566N/Ano
Q9STE8TC753_ARATHNo assigned EC number0.77830.98520.9792yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.I.8094.1
hypothetical protein (743 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pm.C_LG_IX0151
hypothetical protein (290 aa)
       0.416

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query813
PLN03138796 PLN03138, PLN03138, Protein TOC75; Provisional 0.0
TIGR00992718 TIGR00992, 3a0901s03IAP75, chloroplast envelope pr 0.0
pfam01103317 pfam01103, Bac_surface_Ag, Surface antigen 4e-32
COG4775766 COG4775, COG4775, Outer membrane protein/protectiv 3e-16
TIGR03303741 TIGR03303, OM_YaeT, outer membrane protein assembl 2e-07
COG2831554 COG2831, FhaC, Hemolysin activation/secretion prot 1e-05
COG4775766 COG4775, COG4775, Outer membrane protein/protectiv 0.001
COG0729594 COG0729, COG0729, Outer membrane protein [Cell env 0.002
>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional Back     alignment and domain information
 Score = 1424 bits (3687), Expect = 0.0
 Identities = 627/813 (77%), Positives = 693/813 (85%), Gaps = 23/813 (2%)

Query: 1   MPSFAAPTNLLPSTTTPSTFSRRKFSSTPSPSSVNPRASSTSIQCNSSNPLNPSRPSSLQ 60
           M S AA T+L  S    S+FS R    +P  ++ +PRASS     ++S   + +  SS  
Sbjct: 7   MVSAAASTSLSSSRPQLSSFSSR----SPQSATRSPRASSIKCSASAS-ASSSATSSSAS 61

Query: 61  NPNSKRNKQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGFGGG 120
              +               +  S              GGG G  GFGGGGGGGG G GG 
Sbjct: 62  LVANGA-------VALLSASAISGGGG----------GGGGGFGGFGGGGGGGGGGGGGW 104

Query: 121 GFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGAT 180
            FW ++F    A ADE+ +S DWD+HGLP NI V LSKLSGF++YK+SEI FFDR+R  T
Sbjct: 105 RFWLRLFAPADAHADEE-QSGDWDSHGLPVNITVPLSKLSGFKRYKVSEIEFFDRRRNTT 163

Query: 181 VGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLE 240
           VGTEDSFFEMV+LRPGGVYT+ QL KELETLA+CGMFEKVD+E KTKPDGTLGLTISF E
Sbjct: 164 VGTEDSFFEMVTLRPGGVYTKAQLQKELETLASCGMFEKVDLEGKTKPDGTLGLTISFTE 223

Query: 241 STWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQS 300
           STWQSA+  RCINVGLM QSKPIEMD DMT++EK+EYY+SQEKDYKRRI KARPCLLP+S
Sbjct: 224 STWQSADSFRCINVGLMSQSKPIEMDEDMTDKEKMEYYRSQEKDYKRRIRKARPCLLPKS 283

Query: 301 VHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGD 360
           V  E+L +L+D GKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNT EVVCEVVEGD
Sbjct: 284 VRREVLGMLRDQGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTNEVVCEVVEGD 343

Query: 361 ITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNI 420
           IT++V+QFQDKLGNVVEGNTQL ++ RELPKQLRQG++FNIEAGKQALRNINSL+LFSNI
Sbjct: 344 ITKVVIQFQDKLGNVVEGNTQLPIIDRELPKQLRQGHIFNIEAGKQALRNINSLALFSNI 403

Query: 421 EVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEHR 480
           EVNPRPDEKNEGGI+VEIKLKEL+ KSAEVS EWS+VPGRGGRPT AS+QPGGTVSFEHR
Sbjct: 404 EVNPRPDEKNEGGIVVEIKLKELEPKSAEVSTEWSIVPGRGGRPTLASIQPGGTVSFEHR 463

Query: 481 NLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPV 540
           N+QGLNRSILGSVT+SN LNPQDDL+FKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPV
Sbjct: 464 NIQGLNRSILGSVTSSNLLNPQDDLSFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPV 523

Query: 541 FTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVL 600
           FTGGPGVDEVP IWVDRAG KANITENFTRQSKFTYGLV+EEITTRDE+SHI  HGQRVL
Sbjct: 524 FTGGPGVDEVPPIWVDRAGFKANITENFTRQSKFTYGLVVEEITTRDETSHICTHGQRVL 583

Query: 601 PSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKF 660
           PSGG+SADGPPTTLSGTGIDRMAFLQ NITRDNTKFVNGA+VG+R++FQVDQGLGIGSKF
Sbjct: 584 PSGGLSADGPPTTLSGTGIDRMAFLQANITRDNTKFVNGAVVGDRHIFQVDQGLGIGSKF 643

Query: 661 PFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRG 720
           PFFNRHQLT+T+F QL +VE+GA KPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRG
Sbjct: 644 PFFNRHQLTVTKFIQLNKVEKGAGKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRG 703

Query: 721 YNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSS 780
           YNMGELGAARNILE+ AE+RIPV+NTHVYAF EHG DLGSSKDVKGNPTE +RR GHGSS
Sbjct: 704 YNMGELGAARNILEVAAELRIPVRNTHVYAFAEHGTDLGSSKDVKGNPTEFFRRAGHGSS 763

Query: 781 YGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 813
           YGVG KLGLVRAEYAVDHN GTGA+FFRFGER+
Sbjct: 764 YGVGVKLGLVRAEYAVDHNAGTGAIFFRFGERF 796


Length = 796

>gnl|CDD|130065 TIGR00992, 3a0901s03IAP75, chloroplast envelope protein translocase, IAP75 family Back     alignment and domain information
>gnl|CDD|216300 pfam01103, Bac_surface_Ag, Surface antigen Back     alignment and domain information
>gnl|CDD|227116 COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|234165 TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein Back     alignment and domain information
>gnl|CDD|225387 COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|227116 COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|223801 COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 813
PLN03138796 Protein TOC75; Provisional 100.0
TIGR00992718 3a0901s03IAP75 chloroplast envelope protein transl 100.0
COG4775766 Outer membrane protein/protective antigen OMA87 [C 100.0
PRK11067803 outer membrane protein assembly factor YaeT; Provi 100.0
TIGR03303741 OM_YaeT outer membrane protein assembly complex, Y 100.0
COG0729594 Outer membrane protein [Cell envelope biogenesis, 100.0
PF01103323 Bac_surface_Ag: Surface antigen; InterPro: IPR0001 100.0
COG2831554 FhaC Hemolysin activation/secretion protein [Intra 99.96
KOG2602457 consensus Predicted cell surface protein homologou 99.94
PRK11067803 outer membrane protein assembly factor YaeT; Provi 99.88
TIGR03303741 OM_YaeT outer membrane protein assembly complex, Y 99.88
COG4775766 Outer membrane protein/protective antigen OMA87 [C 99.85
PF03865404 ShlB: Haemolysin secretion/activation protein ShlB 99.82
PLN03138796 Protein TOC75; Provisional 99.28
PF0724478 Surf_Ag_VNR: Surface antigen variable number repea 98.62
PF0724478 Surf_Ag_VNR: Surface antigen variable number repea 98.45
TIGR00992718 3a0901s03IAP75 chloroplast envelope protein transl 98.33
PF0847976 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013 98.22
COG2831554 FhaC Hemolysin activation/secretion protein [Intra 96.37
PF0847976 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013 93.33
COG0729594 Outer membrane protein [Cell envelope biogenesis, 92.91
KOG3915641 consensus Transcription regulator dachshund, conta 86.0
PF05918556 API5: Apoptosis inhibitory protein 5 (API5); Inter 83.82
>PLN03138 Protein TOC75; Provisional Back     alignment and domain information
Probab=100.00  E-value=6.9e-118  Score=1025.82  Aligned_cols=791  Identities=79%  Similarity=1.261  Sum_probs=688.1

Q ss_pred             CCCcCCCCCcccCCCCCCCccccccCCC--CCCCCCCCCCCccceeccCCCCCCCCCCCCCCCCCccccccccccccccc
Q 039285            1 MPSFAAPTNLLPSTTTPSTFSRRKFSST--PSPSSVNPRASSTSIQCNSSNPLNPSRPSSLQNPNSKRNKQHILKSLTKP   78 (813)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (813)
                      |.++.+.....++...++..+.....++  ..+++..+|++  ++||+++.+    .. +..++    +..++.+..+..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~-~~~~~----~~~~~~~~~~~~   69 (796)
T PLN03138          1 GRSSSTMVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRAS--SIKCSASAS----AS-SSATS----SSASLVANGAVA   69 (796)
T ss_pred             CCcccccceeccCCCccCCCccccccccccccccCCCCCCC--ccccccccc----cc-ccCCc----cccccccCcccc
Confidence            4566666666666655444333332222  25566688888  899998876    22 22222    222222332222


Q ss_pred             ceeccccceeEEEeeecccCCCCCC---CCCCCCCCCCCCCCCCcccceEeeccchhhccccccccccccCCCCceeeEE
Q 039285           79 LAVASFASATIFIRLTPVLGGGSGG---DGFGGGGGGGGDGFGGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQ  155 (813)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  155 (813)
                               + ++...+.++||++|   ||||+||||||+|+|++|||.++|+|+++++|+. ...+||.|||++||+|+
T Consensus        70 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  138 (796)
T PLN03138         70 ---------L-LSASAISGGGGGGGGGFGGFGGGGGGGGGGGGGWRFWLRLFAPADAHADEE-QSGDWDSHGLPVNITVP  138 (796)
T ss_pred             ---------c-cccccccccCcCCCCCcCCCCCCCCCCCCCCcccchhhhhcChhhhhcCCc-cCCCCccccCcccceEe
Confidence                     1 11212223333333   4444444444445556689999999999999966 79999999999999999


Q ss_pred             eeeecCccceEEEEEEEEeccCCcccCChhhHhhhcccCCCCcccHHHHHHHHHHHHHcCCcceEEEEEEEcCCCceEEE
Q 039285          156 LSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLT  235 (813)
Q Consensus       156 ~~~i~e~~~~~I~~I~f~G~~~g~~~~~~~~l~~~l~~~~g~~~~~~~l~~d~~~L~~~Gyf~~V~~~~~~~~d~~~~v~  235 (813)
                      +.++++-++++|++|.|.|.+.+.....|+.|.+.|.+++|..|++.+|++|+++|+++|||++|+++++..+|+.+.|+
T Consensus       139 ~~~~~~~~~~~vs~v~~~~~~~~~~~~~e~~l~~~i~~kpG~v~trsqLq~dv~~I~~tG~F~~V~~~v~~~~dg~v~V~  218 (796)
T PLN03138        139 LSKLSGFKRYKVSEIEFFDRRRNTTVGTEDSFFEMVTLRPGGVYTKAQLQKELETLASCGMFEKVDLEGKTKPDGTLGLT  218 (796)
T ss_pred             chhcCCcceEEEEEEEEeccccCCCcchHHHHHHHHhcCCCCccCHHHHHHHHHHHHhcCCceEEEEEEEeCCCCeEEEE
Confidence            99999999999999999998777778899999999999999999999999999999999999999999888888866777


Q ss_pred             EEEEeeecccceeEEEeeccccccccceecCccCChHHHHHHhhhhhhhhhhhccccCCCCCChhHHHHHHhhcCCCCee
Q 039285          236 ISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKV  315 (813)
Q Consensus       236 i~~~v~e~p~g~~~k~~~vg~~~~~i~i~Gn~~~~~~~l~~~~~~~~~~y~~~i~~~g~~~l~~~~l~~~~~~lk~g~~~  315 (813)
                      |+|.+.+++.++++++||||+|.+...|+||+.+++++|++.|..+++.|++|++.+.+|+||.+.++++|.+++..++|
T Consensus       219 ~~i~Eg~~~~I~~I~~i~~~~~~~~~~~~GN~~fs~~el~~~~~~~e~~~~~~~~~a~~~~Lp~~v~~e~f~~~~~~gkl  298 (796)
T PLN03138        219 ISFTESTWQSADSFRCINVGLMSQSKPIEMDEDMTDKEKMEYYRSQEKDYKRRIRKARPCLLPKSVRREVLGMLRDQGKV  298 (796)
T ss_pred             EEEEeCCceeeeeeeecccccccccceeeCCcccCHHHHHHHhhccccccccccccccccccchHHHHHHHhhhccCCcC
Confidence            88887788899999999999999998899999999999999999999999999999999999999999999987666679


Q ss_pred             cHHHHHHHHHHHHHHHHHCCCceeEEeeeeeecCeEEEEEEeeceeeeeEEeeeccCCceeecCccHHHHHHhccccCCC
Q 039285          316 SARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQ  395 (813)
Q Consensus       316 ~~~~l~~~~~~I~~~Y~~~GY~~a~V~~~~~~~~~~i~i~I~EG~~~~i~i~~i~~~G~~i~Gnt~~~vI~r~l~~~l~~  395 (813)
                      +.++|++++++|+++|.++||.+++|.+...++++.|+|+|.||++.+|+|++++++|++|+|||+|++|+|+|+..++|
T Consensus       299 N~e~Lq~die~I~~~Y~d~GYafa~V~~~~~id~g~Vtl~V~EG~i~~I~V~~~drig~~i~GNTrD~VIRREL~~~lke  378 (796)
T PLN03138        299 SARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTNEVVCEVVEGDITKVVIQFQDKLGNVVEGNTQLPIIDRELPKQLRQ  378 (796)
T ss_pred             CHHHHHHHHHHHHHHHHhCCCceEEEecccccCCceEEEEEecccEEEEEEEecccccccccCCccCeEEeeecccccCC
Confidence            99999999999999999999999999988777888999999999999999999999988999999999999999611599


Q ss_pred             CCccChHHHHHHHHHHhcCCCceeeEeeecCCCCCCCeEEEEEEEEEccCceEEEeEEEeecCCCCCCCCcccCCCeEEE
Q 039285          396 GNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTV  475 (813)
Q Consensus       396 G~~yn~~~l~~~~~~L~~~g~F~~V~i~~~~~~~~~~~v~l~i~V~E~~~~~~~lg~g~s~~~G~~G~st~~~~~~~~~~  475 (813)
                      |++||..++++++++|+++|||++|++++.|....++.++|+|+|+|.++.+.+++++|+...|..+.++..+.++.+++
T Consensus       379 Gd~fN~~~l~~slqRL~~LGlFedV~V~~~Pg~~~p~~VdL~V~VkE~e~~t~~ls~g~g~~~G~g~~Psl~S~g~~Gtv  458 (796)
T PLN03138        379 GHIFNIEAGKQALRNINSLALFSNIEVNPRPDEKNEGGIVVEIKLKELEPKSAEVSTEWSIVPGRGGRPTLASIQPGGTV  458 (796)
T ss_pred             CcccCHHHHHHHHHHHHhCCCCceeEEEeccCCCCCCeEEEEEEEEEccCCceeEecccccccccCCCCccccccceeEE
Confidence            99999999999999999999999999999987655689999999999999999999999887776667777777889999


Q ss_pred             EEeeecccCCcceEEEEEEeecccCCCccceEEEEEEeccccCCCCCCcceEEEEEeeccccCccccCCCCCCcCCceeE
Q 039285          476 SFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWV  555 (813)
Q Consensus       476 s~~~~Nl~G~G~~l~~~~~~s~~~~~~~~~~~~lsy~~P~l~~~~~p~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  555 (813)
                      +|+|+||+|+|++|.++++.++++.++++..|+++|++||+.+.++|.++++.+++|++++.+.+|+.++.+.+++..|.
T Consensus       459 s~~~~NL~G~g~~L~~~v~~s~~~~g~~d~~f~lsytdPWi~g~~d~~rts~~~~~f~~r~~s~vf~~~~~~~~~~~~~~  538 (796)
T PLN03138        459 SFEHRNIQGLNRSILGSVTSSNLLNPQDDLSFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPPIWV  538 (796)
T ss_pred             EEeccccccccceEEEEEEeecccCCccceEEEEEeecccccCCCCcccccEEEEEEecCcCCceeeCCCCcccCCcceE
Confidence            99999999999999999998877778899999999999999875557779999999999998888988766556667789


Q ss_pred             eeeeeEEEEeEecccCceEEEEEEEEEEEeecCCCCcCCCCccccCCCCcCCCCCCccccCCCcceeEEEEEEEEEeCCC
Q 039285          556 DRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTK  635 (813)
Q Consensus       556 ~~~G~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~g~~~~~~l~~~~t~D~rD  635 (813)
                      .|.|+.+.++++|++++++++++.++++.++|+.+++++.+.+.+|.+.++++++|+++|+.+.|++..+++.++||++|
T Consensus       539 ~R~G~~~~~~rp~~~~~~~s~g~~~q~v~~~d~~g~~~~~~~~~~~~~~~~~~g~plT~S~~g~D~l~~~~~~~trd~~~  618 (796)
T PLN03138        539 DRAGFKANITENFTRQSKFTYGLVVEEITTRDETSHICTHGQRVLPSGGLSADGPPTTLSGTGIDRMAFLQANITRDNTK  618 (796)
T ss_pred             eecccceEeecccCCCCceEEEEEEEEEEeecCCCCccccccccccccccccCCCceeeccCCcchhhheeeeeEeccCC
Confidence            99999999999999988899999999999999999888877788888778889999999999999999999999999999


Q ss_pred             CCCCCCCccEEEEEEEecccCCCCCcceEEEEEEEEEEEEcccccccCCCCCCcEEEEEEEeeeeecCCCcccccccCCC
Q 039285          636 FVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGP  715 (813)
Q Consensus       636 ~~~~Pt~G~~~~~~~e~~~~lg~d~~~f~k~~~~~~~y~~l~~~~~~~~~~~~~vl~~r~~~G~~~g~lp~~erF~lGG~  715 (813)
                      ++..||.|.++.+++||++++|.++.+|+|+.+++++|+|+...+.+.+++.+.+|++++++|++.|+||+||+|.|||.
T Consensus       619 ~~~~pt~G~~~~~~~EQ~lpvg~~~~~fNR~~~~~s~fipv~~~~~~~~~~~Pq~la~~~~aG~~~GdLPpYEAF~LGG~  698 (796)
T PLN03138        619 FVNGAVVGDRHIFQVDQGLGIGSKFPFFNRHQLTVTKFIQLNKVEKGAGKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGP  698 (796)
T ss_pred             CCCCCCccceEEEEeeeeccccCCCCceEEEEEEEEEEEeeccccccccCCCCcEEEEEEeccceecCCCcHHhcccCCC
Confidence            99999999999999999999999999999999999999999644333333457999999999999999999999999999


Q ss_pred             CccccccCCccCccceeeEEeEEEEEEecceeEEEEEeecccCCCCCCCCCCCccccccCCceeeeeEEEEEeeEEEEEE
Q 039285          716 YSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYA  795 (813)
Q Consensus       716 ~svRGy~~~~ig~G~~~~~~s~Elr~pl~~~~~~~F~D~G~vw~~~~~~~~~~~~~~~~~~~~~s~G~GlrlGpirld~a  795 (813)
                      +|||||.++++|.|++++++++||||||..+.+++|+|+|+.|++..+++++|..++++++..+|||+|+|+||||+|||
T Consensus       699 nSVRGY~eG~lg~gRs~l~asaEyRfPi~~~~g~~F~D~GsdLgS~~~V~G~P~~~r~kpG~G~syG~GvrlGpiR~dYa  778 (796)
T PLN03138        699 YSVRGYNMGELGAARNILEVAAELRIPVRNTHVYAFAEHGTDLGSSKDVKGNPTEFFRRAGHGSSYGVGVKLGLVRAEYA  778 (796)
T ss_pred             CcccCcccCcccccceeEEEEEEEEeeeccceEEEEEEeccccCCCCCCCCCchhhccCCCCCcccceeeEecceeEEEe
Confidence            99999999999999999999999999998889999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCeEEEEEeccCC
Q 039285          796 VDHNTGTGALFFRFGERY  813 (813)
Q Consensus       796 ~~~~~~~~~f~F~iG~~F  813 (813)
                      ++++.++++|||+||.+|
T Consensus       779 ~~~~~G~~r~hfg~GerF  796 (796)
T PLN03138        779 VDHNAGTGAIFFRFGERF  796 (796)
T ss_pred             ecCCCCCceEEEeccccC
Confidence            998778999999999998



>TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family Back     alignment and domain information
>COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11067 outer membrane protein assembly factor YaeT; Provisional Back     alignment and domain information
>TIGR03303 OM_YaeT outer membrane protein assembly complex, YaeT protein Back     alignment and domain information
>COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF01103 Bac_surface_Ag: Surface antigen; InterPro: IPR000184 The protein sequences of d15 from various strains of Haemophilus influenzae are highly conserved, with only a small variable region identified near the carboxyl terminus of the protein [] Back     alignment and domain information
>COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG2602 consensus Predicted cell surface protein homologous to bacterial outer membrane proteins [General function prediction only] Back     alignment and domain information
>PRK11067 outer membrane protein assembly factor YaeT; Provisional Back     alignment and domain information
>TIGR03303 OM_YaeT outer membrane protein assembly complex, YaeT protein Back     alignment and domain information
>COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03865 ShlB: Haemolysin secretion/activation protein ShlB/FhaC/HecB; InterPro: IPR005565 Haemolysin (HlyA) and related toxins are secreted across both the cytoplasmic and outer membranes of Gram-negative bacteria in a process which proceeds without a periplasmic intermediate Back     alignment and domain information
>PLN03138 Protein TOC75; Provisional Back     alignment and domain information
>PF07244 Surf_Ag_VNR: Surface antigen variable number repeat; InterPro: IPR010827 This motif is found primarily in bacterial surface antigens, normally as variable number repeats at the N terminus Back     alignment and domain information
>PF07244 Surf_Ag_VNR: Surface antigen variable number repeat; InterPro: IPR010827 This motif is found primarily in bacterial surface antigens, normally as variable number repeats at the N terminus Back     alignment and domain information
>TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family Back     alignment and domain information
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO) Back     alignment and domain information
>COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion] Back     alignment and domain information
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO) Back     alignment and domain information
>COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG3915 consensus Transcription regulator dachshund, contains SKI/SNO domain [Transcription] Back     alignment and domain information
>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query813
3mc8_A316 Potra1-3 Of The Periplasmic Domain Of Omp85 From An 4e-10
2x8x_X235 Structure Of The N-Terminal Domain Of Omp85 From Th 5e-09
>pdb|3MC8|A Chain A, Potra1-3 Of The Periplasmic Domain Of Omp85 From Anabaena Length = 316 Back     alignment and structure

Iteration: 1

Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 50/266 (18%) Query: 167 LSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKT 226 +SE+L + T E + ++ +PG TR+QL +++ + G F V + Sbjct: 64 VSEVLVRPQSGQLTPELETQVYNVIRTQPGRTTTRSQLQEDINAIFGTGFFSNVQASPED 123 Query: 227 KPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYK 286 P LG+ +SF+ Q P+ K+E + + Sbjct: 124 TP---LGVRVSFIV------------------QPNPV--------LSKVEIQANPGTNV- 153 Query: 287 RRIDKARPCLLPQSVHNEILQILKDHGKV-SARLLQRIRDRVQKWYHDEGYACAQVVNFG 345 P +LPQ+ +EI + +GK+ + R LQ + K Y D+GY A VV Sbjct: 154 -------PSVLPQATADEIFR--AQYGKILNLRDLQEGIKELTKRYQDQGYVLANVVGAP 204 Query: 346 NLNTREVVC-EVVEGDITQLVVQFQDK-------LGNVVEGNTQLAVVKRELPKQLRQGN 397 ++ VV +V EG + + V+F++K G + G TQ ++ RE+ +L+ G Sbjct: 205 QVSENGVVTLQVAEGVVENISVRFRNKEGQDVNEQGQPIRGRTQDYIITREV--ELKPGQ 262 Query: 398 VFNIEAGKQALRNINSLSLFSNIEVN 423 VFN ++ L+ + LF ++ V+ Sbjct: 263 VFNRNTVQKDLQRVFGTGLFEDVNVS 288
>pdb|2X8X|X Chain X, Structure Of The N-Terminal Domain Of Omp85 From The Thermophilic Cyanobacterium Thermosynechococcus Elongatus Length = 235 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query813
2qdz_A554 TPSB transporter FHAC; beta barrel, potra domain, 100.0
3mc9_A316 ALR2269 protein; polypeptide transport associated, 99.95
2x8x_X235 TLR1789 protein, OMP85; chaperone, TOC75, protein 99.94
3efc_A395 OMP85, outer membrane protein assembly factor YAET 99.93
3efc_A395 OMP85, outer membrane protein assembly factor YAET 99.92
2qdf_A335 OMP85, outer membrane protein assembly factor YAET 99.91
2qdf_A335 OMP85, outer membrane protein assembly factor YAET 99.83
3q6b_A189 Outer membrane protein assembly complex, YAET Pro; 99.78
3q6b_A189 Outer membrane protein assembly complex, YAET Pro; 99.21
2x8x_X235 TLR1789 protein, OMP85; chaperone, TOC75, protein 99.08
3mc9_A316 ALR2269 protein; polypeptide transport associated, 98.74
2qdz_A554 TPSB transporter FHAC; beta barrel, potra domain, 98.72
>2qdz_A TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis} PDB: 3njt_A Back     alignment and structure
Probab=100.00  E-value=2.5e-43  Score=413.15  Aligned_cols=459  Identities=14%  Similarity=0.122  Sum_probs=331.2

Q ss_pred             ceeEEEeeccccccccceecCccCChHHHHHHhhhhhhhhhhhccccCCCCCChhHHHHHHhhcCCCCeecHHHHHHHHH
Q 039285          246 AERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRD  325 (813)
Q Consensus       246 g~~~k~~~vg~~~~~i~i~Gn~~~~~~~l~~~~~~~~~~y~~~i~~~g~~~l~~~~l~~~~~~lk~g~~~~~~~l~~~~~  325 (813)
                      +++++|       .+|.|+||..+++++|.+                            +++ .+.|++|+.+.|+++++
T Consensus        56 g~~~~i-------~~I~~~G~~~~~~~~l~~----------------------------~~~-~~~G~~~~~~~l~~~~~   99 (554)
T 2qdz_A           56 GHTVTV-------HAVDLDFGVEGRLFDPAP----------------------------LVQ-DYLNRPLDNEQLFLLVK   99 (554)
T ss_dssp             CCSSSS-------CCEEEECCSSSCCCSCST----------------------------TST-TSSSSCBCSTTHHHHHH
T ss_pred             CceEEE-------EEEEEECCccCCHHHHHH----------------------------HhH-hhcCCCCCHHHHHHHHH
Confidence            777764       677899998877655433                            233 46799999999999999


Q ss_pred             HHHHHHHHCCCceeEEe-eeeeecCeEEEEEEeeceeeeeEEeeeccCCceeecC--ccHHHHHH---hccccCCCCCcc
Q 039285          326 RVQKWYHDEGYACAQVV-NFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGN--TQLAVVKR---ELPKQLRQGNVF  399 (813)
Q Consensus       326 ~I~~~Y~~~GY~~a~V~-~~~~~~~~~i~i~I~EG~~~~i~i~~i~~~G~~i~Gn--t~~~vI~r---~l~~~l~~G~~y  399 (813)
                      +|+++|.++||++|+|. +.++++++.|+|.|+||++..|          .|.||  +++.+|++   +++  +++|++|
T Consensus       100 ~i~~~y~~~GY~~a~v~~~~~~~~~g~l~i~v~eG~i~~I----------~i~G~~~~~~~~l~~~~~~~~--~~~G~~~  167 (554)
T 2qdz_A          100 ALSAALYDRGYATSIVTFVPPGVVDGVLKLKVEWGRIKGW----------LIDGKPLEGTRDRMMVFSAMP--GWQDKVL  167 (554)
T ss_dssp             HHHHHHHHTTCTTCEEEEEEEEEETTEEEEEEECCEEEEE----------EETTEECCSHHHHHHHHHHST--TCTTCBC
T ss_pred             HHHHHHHHcCceeeeEEcccccccCCEEEEEEEeEEEEEE----------EECCCCccchhhhhhhhhhcc--ccCCCcC
Confidence            99999999999999995 4455567789999999987665          35576  45889999   999  9999999


Q ss_pred             ChHHHHHHHHHHhcCCCceeeEeeecCCCCCCCeEEEEEEEEEccCceEEEeEEEeecCCCCCCCCcccCCCeEEEEEee
Q 039285          400 NIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEH  479 (813)
Q Consensus       400 n~~~l~~~~~~L~~~g~F~~V~i~~~~~~~~~~~v~l~i~V~E~~~~~~~lg~g~s~~~G~~G~st~~~~~~~~~~s~~~  479 (813)
                      |..+|++++++|++++  .+|++.+.|... ++.++|+|+|+|+++..  +++++++..  .|..+...+  .+.+++.+
T Consensus       168 n~~~le~~~~~L~~~~--~~v~~~~~p~~~-~g~~~l~v~v~e~~~~~--~~~g~~~~g--~g~~~tg~~--~~~~~~~~  238 (554)
T 2qdz_A          168 NVFDIDQAIYNINNGG--KTGNITIVPADE-YGYSYLDLQLQRRALPR--VSLGMDNSG--PGTPENGRY--KYNASVTA  238 (554)
T ss_dssp             CHHHHHHHHHHHCSSS--EEEEEEEEECSS-TTEEEEEEEEEECCSCE--EEEEEEECS--CSSSCSSCE--EEEEEEEE
T ss_pred             CHHHHHHHHHHHhcCc--hhceEEEecCCC-CCeeEEEEEEeeCCcEE--EEEEEcCCC--CCCCCccce--EEEEEEEe
Confidence            9999999999999998  788888888665 48999999999988654  555555421  001122233  88999999


Q ss_pred             ecccCCcceEEEEEEeeccc--CCCccceEEEEEEeccccCCCCCCcceEEEEEeeccccCccccCCCCCCcCCceeEee
Q 039285          480 RNLQGLNRSILGSVTTSNFL--NPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDR  557 (813)
Q Consensus       480 ~Nl~G~G~~l~~~~~~s~~~--~~~~~~~~~lsy~~P~l~~~~~p~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~  557 (813)
                      +|++|.|+++.+++..+...  .......+.++|+.||..       +.+++++..++..+....  .  .....|..++
T Consensus       239 ~n~~g~gd~l~~~~~~~~~~~~~~~~~~~~~~~y~~P~~~-------~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~s  307 (554)
T 2qdz_A          239 NDLLGLNDTLGLYIGNRYYRDAGHDAERNYDLMYSVPLGR-------TRLDLQTGYSTYRNLLKT--R--YGQYQSAGNS  307 (554)
T ss_dssp             ECSSSSSCEEEEEEEEECCSCCSSCEEEEEEEEEEEEETT-------EEEEEEEEEEEEECCCSS--S--SCCCCCEEEE
T ss_pred             CCCCCCCcEEEEEEEecCccccCCCCceEEEEEEEEEEec-------CeEEEEEEEeEEEEEccC--C--cceEEEEeeE
Confidence            99999999999999874210  113578999999999853       234444333322111111  0  0112355677


Q ss_pred             eeeEEEEeEeccc--CceEEEEEEEEEEEeecCCCCcCCCCccccCCCCcCCCCCCccccCCCcceeEEEEEEEEEeCCC
Q 039285          558 AGLKANITENFTR--QSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTK  635 (813)
Q Consensus       558 ~G~~~~l~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~g~~~~~~l~~~~t~D~rD  635 (813)
                      .++++.+++++.+  .+++++++.+.+.+..+......      ++               ........+.++++||+++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~~~~~~~  366 (554)
T 2qdz_A          308 RSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYLAGTR------LD---------------VSSKHYSDVTVGMQYSTQR  366 (554)
T ss_dssp             EEEEEEEEEEEECCSSEEEEEEEEEEEEEEEEECCTTS------CC---------------CEEEEEEEEEEEEEEEEEC
T ss_pred             EEEEEEEEEEEEECCCeEEEEEEEEEEEEeeeeeCCcC------cc---------------ccCceEEEEEEEEEEEEEe
Confidence            7888999999854  44455555544433222111000      00               0112356788899999875


Q ss_pred             CCCCCCCccEEEEEEEecccC-----------CCCCcceEEEEEEEEEEEEcccccccCCCCCCcEEEEEEEeeeeecCC
Q 039285          636 FVNGAIVGERNVFQVDQGLGI-----------GSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDL  704 (813)
Q Consensus       636 ~~~~Pt~G~~~~~~~e~~~~l-----------g~d~~~f~k~~~~~~~y~~l~~~~~~~~~~~~~vl~~r~~~G~~~g~l  704 (813)
                          |..++...+.+..+..+           +++.. |.|+.+++++|+|+...      ...+++.+++.+++..+++
T Consensus       367 ----~~~~~~~~~~~~~G~~~~a~~~~~~~~~~~~~~-f~k~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~l  435 (554)
T 2qdz_A          367 ----GANAYFGDLSFTRGVGVNNGKYAAYDERGPQGN-VSRFNGSLAWTRYMALA------GQPIQWASQLGFQYSRQQL  435 (554)
T ss_dssp             ----SSEEEEEEEEEEECCCC--------------CC-CEEEEEEEEEEEEEEET------TEEEEEEEEEEEEECSSCS
T ss_pred             ----cCeEEEEEEEEEecCCCCCCcCcccccCCCcce-EEEEEEEEEEEEEcccc------CCCEEEEEEEEeEecCCCC
Confidence                45556666666555321           34556 69999999999997310      0257788888888877789


Q ss_pred             CcccccccCCCCccccccCCccCccceeeEEeEEEEEEe--------cceeEEEEEeecccCCCCCCCCCCCccccccCC
Q 039285          705 PSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPV--------KNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMG  776 (813)
Q Consensus       705 p~~erF~lGG~~svRGy~~~~ig~G~~~~~~s~Elr~pl--------~~~~~~~F~D~G~vw~~~~~~~~~~~~~~~~~~  776 (813)
                      |++|+|++||.++||||+.+.++||+.++.+++|||+|+        ..+.+++|+|+|++|+...+.   .      ..
T Consensus       436 p~~e~f~lGG~~sVRGy~~~~l~pGd~g~~~~~El~~~~~~~~~~~~~~~~~~~F~D~G~v~~~~~~~---~------~~  506 (554)
T 2qdz_A          436 LNSYQITVGDEYTVRGYNLRTSQSGDSGVYLSNTLTVPVQFSLLGKQASVAPFVGADVGALKSNHPDA---R------TI  506 (554)
T ss_dssp             SSSEECCSCCCCCCTTCCCCCSCCSSCSSCCEESEEEEEEEEEEECCSSCEEEEEEEEEEEECSSSSC---C------EE
T ss_pred             CcHHhEecCCCCeECCcccccccCCCccEEEEEEEEeeccccccCccceEEEEEEEEEEEEecCCCCC---C------CC
Confidence            999999999999999999999987999999999999997        357889999999999754311   1      22


Q ss_pred             ceeeeeEEEE----EeeEEEEEEEecC------CCCeEE-EEEeccCC
Q 039285          777 HGSSYGVGAK----LGLVRAEYAVDHN------TGTGAL-FFRFGERY  813 (813)
Q Consensus       777 ~~~s~G~Glr----lGpirld~a~~~~------~~~~~f-~F~iG~~F  813 (813)
                      +++|+|+|+|    +||+|+|||++..      +...+| ||+||..|
T Consensus       507 ~~~g~G~Glr~~~~~~~l~l~~a~pl~~~~~~~~~~~~~~~fsig~~F  554 (554)
T 2qdz_A          507 RMAGLAAGVRFDLPYARMSFTYSKPVGAQPGGAPRAPVWLYINAGLSF  554 (554)
T ss_dssp             EEEEEEEEEEECCSSEEEEEEEEEECSCSCSSSCCCCSEEEEEEEEEC
T ss_pred             EEEEEEEEEEEecCcEEEEEEEEeeccCCcccccCCceEEEEEEEEEC
Confidence            6799999999    5899999999642      146789 99999987



>3mc9_A ALR2269 protein; polypeptide transport associated, potra, outer bacterial MEM protein membrane transport, beta barrel biogenesis, membran; 2.20A {Nostoc SP} PDB: 3mc8_A Back     alignment and structure
>2x8x_X TLR1789 protein, OMP85; chaperone, TOC75, protein targeting; 1.97A {Thermosynechococcus elongatus} Back     alignment and structure
>3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane, ME protein; 3.30A {Escherichia coli} Back     alignment and structure
>3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane, ME protein; 3.30A {Escherichia coli} Back     alignment and structure
>2qdf_A OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A Back     alignment and structure
>2qdf_A OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A Back     alignment and structure
>3q6b_A Outer membrane protein assembly complex, YAET Pro; potra fold, insertion of outer membrane proteins, protein BI; 1.50A {Escherichia coli} PDB: 3og5_A Back     alignment and structure
>3q6b_A Outer membrane protein assembly complex, YAET Pro; potra fold, insertion of outer membrane proteins, protein BI; 1.50A {Escherichia coli} PDB: 3og5_A Back     alignment and structure
>2x8x_X TLR1789 protein, OMP85; chaperone, TOC75, protein targeting; 1.97A {Thermosynechococcus elongatus} Back     alignment and structure
>3mc9_A ALR2269 protein; polypeptide transport associated, potra, outer bacterial MEM protein membrane transport, beta barrel biogenesis, membran; 2.20A {Nostoc SP} PDB: 3mc8_A Back     alignment and structure
>2qdz_A TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis} PDB: 3njt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 813
d2bdua1291 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III 0.003
>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]
 Score = 38.0 bits (88), Expect = 0.003
 Identities = 19/146 (13%), Positives = 49/146 (33%), Gaps = 27/146 (18%)

Query: 229 DGTLGLTISF-LESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKR 287
           +G    T    +++     +  R   + L +Q   IE+D  +T  EK  Y     + Y +
Sbjct: 54  NGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEEKFPYM---VEWYTK 110

Query: 288 RIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNL 347
                    +P++   ++ +I+ D           +++  + ++               L
Sbjct: 111 SHGLLIEQGIPKA---KLKEIVADSDV-------MLKEGYENFFGK-------------L 147

Query: 348 NTREVVCEVVEGDITQLVVQFQDKLG 373
               +   +    I  ++ +   + G
Sbjct: 148 QQHGIPVFIFSAGIGDVLEEVIRQAG 173


Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00