Citrus Sinensis ID: 039285
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 813 | ||||||
| 255559014 | 815 | sorting and assembly machinery (sam50) p | 0.985 | 0.982 | 0.807 | 0.0 | |
| 224057882 | 813 | predicted protein [Populus trichocarpa] | 0.981 | 0.981 | 0.804 | 0.0 | |
| 225434863 | 808 | PREDICTED: protein TOC75-3, chloroplasti | 0.988 | 0.995 | 0.789 | 0.0 | |
| 147860006 | 784 | hypothetical protein VITISV_006765 [Viti | 0.964 | 1.0 | 0.774 | 0.0 | |
| 297819256 | 817 | translocon outer membrane complex 75-III | 0.987 | 0.982 | 0.782 | 0.0 | |
| 15232625 | 818 | protein TOC75-3 [Arabidopsis thaliana] g | 0.985 | 0.979 | 0.778 | 0.0 | |
| 449470920 | 809 | PREDICTED: protein TOC75-3, chloroplasti | 0.985 | 0.990 | 0.760 | 0.0 | |
| 356557408 | 794 | PREDICTED: protein TOC75-3, chloroplasti | 0.846 | 0.866 | 0.843 | 0.0 | |
| 356550301 | 800 | PREDICTED: protein TOC75-3, chloroplasti | 0.837 | 0.851 | 0.851 | 0.0 | |
| 357472869 | 804 | Protein TOC75 [Medicago truncatula] gi|3 | 0.849 | 0.859 | 0.804 | 0.0 |
| >gi|255559014|ref|XP_002520530.1| sorting and assembly machinery (sam50) protein, putative [Ricinus communis] gi|223540372|gb|EEF41943.1| sorting and assembly machinery (sam50) protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1314 bits (3401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/827 (80%), Positives = 730/827 (88%), Gaps = 26/827 (3%)
Query: 1 MPSFAAPTNLLPSTTTPSTFSRRKFSSTPSPSSVNPRASSTSIQCN-SSNPLNPSRPSSL 59
MPSFAAPTNL+ T TP + S R+ S S + PRASS +C+ SS+ + S SS
Sbjct: 1 MPSFAAPTNLI--TNTPLSSSSRRKSLASSTGT--PRASS--FKCDLSSSSSSSSSSSSQ 54
Query: 60 QNPNSKRNKQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGF-- 117
QNP + +LK+LTKPLAVAS +A++F+RLTP+ SGG GG GG G G
Sbjct: 55 QNP---KPHNSLLKTLTKPLAVAS--AASLFLRLTPIPSPFSGGGNNGGDWGGRGGGGGG 109
Query: 118 -----------GGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYK 166
GG GFW K+F AIADE ++S+D+D+HGLPANI VQL+KLSGF+KYK
Sbjct: 110 GGENNFNGGEAGGDGFWNKLFQPAPAIADE-SQSKDFDSHGLPANIVVQLNKLSGFKKYK 168
Query: 167 LSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKT 226
LS+I+FFDR+R TVG++DSFFEMVSLRPGG YT+ QL KELETLA+CGMFEKVDME KT
Sbjct: 169 LSDIVFFDRRRYTTVGSQDSFFEMVSLRPGGTYTKAQLQKELETLASCGMFEKVDMEGKT 228
Query: 227 KPDGTLGLTISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYK 286
PDGTLG+TISF ESTWQSA++ RCINVGLMQQSKPIEMD DMT++EKLEYY+SQEKDYK
Sbjct: 229 NPDGTLGITISFTESTWQSADKFRCINVGLMQQSKPIEMDPDMTDKEKLEYYRSQEKDYK 288
Query: 287 RRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGN 346
RRI+KARPCLLP SV+ E+LQ+L+D GKVSARLLQ+IRDRVQKWYHDEGYACAQVVNFGN
Sbjct: 289 RRIEKARPCLLPASVNREVLQMLRDQGKVSARLLQKIRDRVQKWYHDEGYACAQVVNFGN 348
Query: 347 LNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQ 406
LNT+EVVCEVVEGDITQ+V+Q+QDKLGNVVEGNTQL VVKRELPKQLRQG VFNIEAGKQ
Sbjct: 349 LNTKEVVCEVVEGDITQMVIQYQDKLGNVVEGNTQLPVVKRELPKQLRQGQVFNIEAGKQ 408
Query: 407 ALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTF 466
ALRNINSL+LFSNIEVNPRPDEKNEGGIIVEIKLKEL+ KSAEVS EWS+VPGRGGRPT
Sbjct: 409 ALRNINSLALFSNIEVNPRPDEKNEGGIIVEIKLKELEPKSAEVSTEWSIVPGRGGRPTL 468
Query: 467 ASLQPGGTVSFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRT 526
AS QPGGTVSFEHRN++GLNRSILGS+TTSNF PQDDLAFKLEYVHPYLDGVYNPRNRT
Sbjct: 469 ASFQPGGTVSFEHRNIKGLNRSILGSITTSNFFLPQDDLAFKLEYVHPYLDGVYNPRNRT 528
Query: 527 FRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTR 586
RASCFNSRKLSPVFTGGPGVDEVP IWVDRAGLKANITENFTRQSKFTYG+VMEEITTR
Sbjct: 529 LRASCFNSRKLSPVFTGGPGVDEVPPIWVDRAGLKANITENFTRQSKFTYGIVMEEITTR 588
Query: 587 DESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERN 646
DESSHIS +GQRVLPSGGISADGPPTTLSGTGIDRMAFLQ NITRDNTKFVNGA+VGERN
Sbjct: 589 DESSHISANGQRVLPSGGISADGPPTTLSGTGIDRMAFLQANITRDNTKFVNGAVVGERN 648
Query: 647 VFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPS 706
VFQVDQGLGIGSKFPFFNRHQLT+TRF L QVEEGA KPPPPVLVL+GHYGGCVGDLPS
Sbjct: 649 VFQVDQGLGIGSKFPFFNRHQLTITRFIPLTQVEEGAGKPPPPVLVLNGHYGGCVGDLPS 708
Query: 707 YDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKG 766
YDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPV+NTHVYAF EHGNDLG+SKDVKG
Sbjct: 709 YDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVRNTHVYAFAEHGNDLGTSKDVKG 768
Query: 767 NPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 813
NPTEVYRRMGHGSSYGVG KLGLVRAEYAVDHNTGTG++FFRFGERY
Sbjct: 769 NPTEVYRRMGHGSSYGVGVKLGLVRAEYAVDHNTGTGSIFFRFGERY 815
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224057882|ref|XP_002299371.1| predicted protein [Populus trichocarpa] gi|222846629|gb|EEE84176.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225434863|ref|XP_002280661.1| PREDICTED: protein TOC75-3, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147860006|emb|CAN81047.1| hypothetical protein VITISV_006765 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297819256|ref|XP_002877511.1| translocon outer membrane complex 75-III [Arabidopsis lyrata subsp. lyrata] gi|297323349|gb|EFH53770.1| translocon outer membrane complex 75-III [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15232625|ref|NP_190258.1| protein TOC75-3 [Arabidopsis thaliana] gi|75207662|sp|Q9STE8.1|TC753_ARATH RecName: Full=Protein TOC75-3, chloroplastic; AltName: Full=75 kDa translocon at the outer-envelope-membrane of chloroplasts 3; Short=AtTOC75-III; Flags: Precursor gi|5541685|emb|CAB51191.1| chloroplast import-associated channel homolog [Arabidopsis thaliana] gi|22022564|gb|AAM83239.1| AT3g46740/T6H20_230 [Arabidopsis thaliana] gi|30102496|gb|AAP21166.1| At3g46740/T6H20_230 [Arabidopsis thaliana] gi|332644678|gb|AEE78199.1| protein TOC75-3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449470920|ref|XP_004153150.1| PREDICTED: protein TOC75-3, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356557408|ref|XP_003547008.1| PREDICTED: protein TOC75-3, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356550301|ref|XP_003543526.1| PREDICTED: protein TOC75-3, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357472869|ref|XP_003606719.1| Protein TOC75 [Medicago truncatula] gi|355507774|gb|AES88916.1| Protein TOC75 [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 813 | ||||||
| TAIR|locus:2102767 | 818 | TOC75-III "translocon at the o | 0.917 | 0.911 | 0.806 | 0.0 | |
| TAIR|locus:2122328 | 396 | TOC75-IV "translocon at the ou | 0.467 | 0.959 | 0.667 | 3.8e-142 | |
| TAIR|locus:2007606 | 399 | TOC75-I "translocon outer memb | 0.232 | 0.473 | 0.607 | 9.3e-113 | |
| TAIR|locus:2183164 | 732 | OEP80 "outer envelope protein | 0.182 | 0.202 | 0.323 | 2.1e-21 | |
| TAIR|locus:2081423 | 362 | AT3G44160 "AT3G44160" [Arabido | 0.274 | 0.616 | 0.320 | 1.5e-16 |
| TAIR|locus:2102767 TOC75-III "translocon at the outer envelope membrane of chloroplasts 75-III" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3210 (1135.0 bits), Expect = 0., P = 0.
Identities = 609/755 (80%), Positives = 667/755 (88%)
Query: 67 NKQHILKSLTKPLAVASFASATIFI-----RLTPVLXXXXXXXXXXXXXXXXXXXXXXXX 121
+K +LK+L KPLAVAS +SA F L VL
Sbjct: 65 SKDSLLKNLAKPLAVASVSSAASFFLFRISNLPSVLTGGGGGGDGNFGGFGGGGGGGDGN 124
Query: 122 X---WRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRG 178
W K+F A+ADE+ +S DWD+HGLPANI VQL+KLSGF+KYK+S+I+FFDR+R
Sbjct: 125 DGGFWGKLFSPSPAVADEE-QSPDWDSHGLPANIVVQLNKLSGFKKYKVSDIMFFDRRRQ 183
Query: 179 ATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISF 238
T+GTEDSFFEMVS+RPGGVYT+ QL KELETLATCGMFEKVD+E KTKPDGTLG+TISF
Sbjct: 184 TTIGTEDSFFEMVSIRPGGVYTKAQLQKELETLATCGMFEKVDLEGKTKPDGTLGVTISF 243
Query: 239 LESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLP 298
ESTWQSA+R RCINVGLM QSKPIEMD+DMT++EKLEYY+S EKDYKRRID+ARPCLLP
Sbjct: 244 AESTWQSADRFRCINVGLMVQSKPIEMDSDMTDKEKLEYYRSLEKDYKRRIDRARPCLLP 303
Query: 299 QSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVE 358
V+ E++Q+L+D GKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNT+EVVCEVVE
Sbjct: 304 APVYGEVMQMLRDQGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTKEVVCEVVE 363
Query: 359 GDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFS 418
GDITQLV+QFQDKLGNVVEGNTQ+ VV+RELPKQLRQG VFNIEAGK+AL NINSL LFS
Sbjct: 364 GDITQLVIQFQDKLGNVVEGNTQVPVVRRELPKQLRQGYVFNIEAGKKALSNINSLGLFS 423
Query: 419 NIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFE 478
NIEVNPRPDEKNEGGIIVEIKLKEL+QKSAEVS EWS+VPGRGG PT AS QPGG+V+FE
Sbjct: 424 NIEVNPRPDEKNEGGIIVEIKLKELEQKSAEVSTEWSIVPGRGGAPTLASFQPGGSVTFE 483
Query: 479 HRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLS 538
HRNLQGLNRS++GSVTTSNFLNPQDDL+FKLEYVHPYLDGVYNPRNRTF+ SCFNSRKLS
Sbjct: 484 HRNLQGLNRSLMGSVTTSNFLNPQDDLSFKLEYVHPYLDGVYNPRNRTFKTSCFNSRKLS 543
Query: 539 PVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQR 598
PVFTGGPGV+EVP IWVDRAG+KANITENFTRQSKFTYGLVMEEITTRDESSHI+ +GQR
Sbjct: 544 PVFTGGPGVEEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEITTRDESSHIAANGQR 603
Query: 599 VLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGS 658
+LPSGGISADGPPTTLSGTG+DRMAFLQ NITRDNTKFVNGA+VG+R VFQVDQGLGIGS
Sbjct: 604 LLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVGQRTVFQVDQGLGIGS 663
Query: 659 KFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSV 718
KFPFFNRHQLT+T+F QL++VE+GA K PPPVLVLHGHYGGCVGDLPSYDAF LGGPYSV
Sbjct: 664 KFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSV 723
Query: 719 RGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHG 778
RGYNMGELGAARNI E+GAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPT VYRR G G
Sbjct: 724 RGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQG 783
Query: 779 SSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 813
SSYG G KLGLVRAEYAVDHN GTGALFFRFGERY
Sbjct: 784 SSYGAGVKLGLVRAEYAVDHNNGTGALFFRFGERY 818
|
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| TAIR|locus:2122328 TOC75-IV "translocon at the outer envelope membrane of chloroplasts 75-IV" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007606 TOC75-I "translocon outer membrane complex 75-I" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2183164 OEP80 "outer envelope protein of 80 kDa" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2081423 AT3G44160 "AT3G44160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.I.8094.1 | hypothetical protein (743 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| estExt_fgenesh4_pm.C_LG_IX0151 | • | 0.416 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 813 | |||
| PLN03138 | 796 | PLN03138, PLN03138, Protein TOC75; Provisional | 0.0 | |
| TIGR00992 | 718 | TIGR00992, 3a0901s03IAP75, chloroplast envelope pr | 0.0 | |
| pfam01103 | 317 | pfam01103, Bac_surface_Ag, Surface antigen | 4e-32 | |
| COG4775 | 766 | COG4775, COG4775, Outer membrane protein/protectiv | 3e-16 | |
| TIGR03303 | 741 | TIGR03303, OM_YaeT, outer membrane protein assembl | 2e-07 | |
| COG2831 | 554 | COG2831, FhaC, Hemolysin activation/secretion prot | 1e-05 | |
| COG4775 | 766 | COG4775, COG4775, Outer membrane protein/protectiv | 0.001 | |
| COG0729 | 594 | COG0729, COG0729, Outer membrane protein [Cell env | 0.002 |
| >gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional | Back alignment and domain information |
|---|
Score = 1424 bits (3687), Expect = 0.0
Identities = 627/813 (77%), Positives = 693/813 (85%), Gaps = 23/813 (2%)
Query: 1 MPSFAAPTNLLPSTTTPSTFSRRKFSSTPSPSSVNPRASSTSIQCNSSNPLNPSRPSSLQ 60
M S AA T+L S S+FS R +P ++ +PRASS ++S + + SS
Sbjct: 7 MVSAAASTSLSSSRPQLSSFSSR----SPQSATRSPRASSIKCSASAS-ASSSATSSSAS 61
Query: 61 NPNSKRNKQHILKSLTKPLAVASFASATIFIRLTPVLGGGSGGDGFGGGGGGGGDGFGGG 120
+ + S GGG G GFGGGGGGGG G GG
Sbjct: 62 LVANGA-------VALLSASAISGGGG----------GGGGGFGGFGGGGGGGGGGGGGW 104
Query: 121 GFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQLSKLSGFRKYKLSEILFFDRQRGAT 180
FW ++F A ADE+ +S DWD+HGLP NI V LSKLSGF++YK+SEI FFDR+R T
Sbjct: 105 RFWLRLFAPADAHADEE-QSGDWDSHGLPVNITVPLSKLSGFKRYKVSEIEFFDRRRNTT 163
Query: 181 VGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLTISFLE 240
VGTEDSFFEMV+LRPGGVYT+ QL KELETLA+CGMFEKVD+E KTKPDGTLGLTISF E
Sbjct: 164 VGTEDSFFEMVTLRPGGVYTKAQLQKELETLASCGMFEKVDLEGKTKPDGTLGLTISFTE 223
Query: 241 STWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQS 300
STWQSA+ RCINVGLM QSKPIEMD DMT++EK+EYY+SQEKDYKRRI KARPCLLP+S
Sbjct: 224 STWQSADSFRCINVGLMSQSKPIEMDEDMTDKEKMEYYRSQEKDYKRRIRKARPCLLPKS 283
Query: 301 VHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGD 360
V E+L +L+D GKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNT EVVCEVVEGD
Sbjct: 284 VRREVLGMLRDQGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTNEVVCEVVEGD 343
Query: 361 ITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQGNVFNIEAGKQALRNINSLSLFSNI 420
IT++V+QFQDKLGNVVEGNTQL ++ RELPKQLRQG++FNIEAGKQALRNINSL+LFSNI
Sbjct: 344 ITKVVIQFQDKLGNVVEGNTQLPIIDRELPKQLRQGHIFNIEAGKQALRNINSLALFSNI 403
Query: 421 EVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEHR 480
EVNPRPDEKNEGGI+VEIKLKEL+ KSAEVS EWS+VPGRGGRPT AS+QPGGTVSFEHR
Sbjct: 404 EVNPRPDEKNEGGIVVEIKLKELEPKSAEVSTEWSIVPGRGGRPTLASIQPGGTVSFEHR 463
Query: 481 NLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPV 540
N+QGLNRSILGSVT+SN LNPQDDL+FKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPV
Sbjct: 464 NIQGLNRSILGSVTSSNLLNPQDDLSFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPV 523
Query: 541 FTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVL 600
FTGGPGVDEVP IWVDRAG KANITENFTRQSKFTYGLV+EEITTRDE+SHI HGQRVL
Sbjct: 524 FTGGPGVDEVPPIWVDRAGFKANITENFTRQSKFTYGLVVEEITTRDETSHICTHGQRVL 583
Query: 601 PSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKF 660
PSGG+SADGPPTTLSGTGIDRMAFLQ NITRDNTKFVNGA+VG+R++FQVDQGLGIGSKF
Sbjct: 584 PSGGLSADGPPTTLSGTGIDRMAFLQANITRDNTKFVNGAVVGDRHIFQVDQGLGIGSKF 643
Query: 661 PFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRG 720
PFFNRHQLT+T+F QL +VE+GA KPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRG
Sbjct: 644 PFFNRHQLTVTKFIQLNKVEKGAGKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRG 703
Query: 721 YNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSS 780
YNMGELGAARNILE+ AE+RIPV+NTHVYAF EHG DLGSSKDVKGNPTE +RR GHGSS
Sbjct: 704 YNMGELGAARNILEVAAELRIPVRNTHVYAFAEHGTDLGSSKDVKGNPTEFFRRAGHGSS 763
Query: 781 YGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 813
YGVG KLGLVRAEYAVDHN GTGA+FFRFGER+
Sbjct: 764 YGVGVKLGLVRAEYAVDHNAGTGAIFFRFGERF 796
|
Length = 796 |
| >gnl|CDD|130065 TIGR00992, 3a0901s03IAP75, chloroplast envelope protein translocase, IAP75 family | Back alignment and domain information |
|---|
| >gnl|CDD|216300 pfam01103, Bac_surface_Ag, Surface antigen | Back alignment and domain information |
|---|
| >gnl|CDD|227116 COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234165 TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein | Back alignment and domain information |
|---|
| >gnl|CDD|225387 COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >gnl|CDD|227116 COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|223801 COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 813 | |||
| PLN03138 | 796 | Protein TOC75; Provisional | 100.0 | |
| TIGR00992 | 718 | 3a0901s03IAP75 chloroplast envelope protein transl | 100.0 | |
| COG4775 | 766 | Outer membrane protein/protective antigen OMA87 [C | 100.0 | |
| PRK11067 | 803 | outer membrane protein assembly factor YaeT; Provi | 100.0 | |
| TIGR03303 | 741 | OM_YaeT outer membrane protein assembly complex, Y | 100.0 | |
| COG0729 | 594 | Outer membrane protein [Cell envelope biogenesis, | 100.0 | |
| PF01103 | 323 | Bac_surface_Ag: Surface antigen; InterPro: IPR0001 | 100.0 | |
| COG2831 | 554 | FhaC Hemolysin activation/secretion protein [Intra | 99.96 | |
| KOG2602 | 457 | consensus Predicted cell surface protein homologou | 99.94 | |
| PRK11067 | 803 | outer membrane protein assembly factor YaeT; Provi | 99.88 | |
| TIGR03303 | 741 | OM_YaeT outer membrane protein assembly complex, Y | 99.88 | |
| COG4775 | 766 | Outer membrane protein/protective antigen OMA87 [C | 99.85 | |
| PF03865 | 404 | ShlB: Haemolysin secretion/activation protein ShlB | 99.82 | |
| PLN03138 | 796 | Protein TOC75; Provisional | 99.28 | |
| PF07244 | 78 | Surf_Ag_VNR: Surface antigen variable number repea | 98.62 | |
| PF07244 | 78 | Surf_Ag_VNR: Surface antigen variable number repea | 98.45 | |
| TIGR00992 | 718 | 3a0901s03IAP75 chloroplast envelope protein transl | 98.33 | |
| PF08479 | 76 | POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013 | 98.22 | |
| COG2831 | 554 | FhaC Hemolysin activation/secretion protein [Intra | 96.37 | |
| PF08479 | 76 | POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013 | 93.33 | |
| COG0729 | 594 | Outer membrane protein [Cell envelope biogenesis, | 92.91 | |
| KOG3915 | 641 | consensus Transcription regulator dachshund, conta | 86.0 | |
| PF05918 | 556 | API5: Apoptosis inhibitory protein 5 (API5); Inter | 83.82 |
| >PLN03138 Protein TOC75; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-118 Score=1025.82 Aligned_cols=791 Identities=79% Similarity=1.261 Sum_probs=688.1
Q ss_pred CCCcCCCCCcccCCCCCCCccccccCCC--CCCCCCCCCCCccceeccCCCCCCCCCCCCCCCCCccccccccccccccc
Q 039285 1 MPSFAAPTNLLPSTTTPSTFSRRKFSST--PSPSSVNPRASSTSIQCNSSNPLNPSRPSSLQNPNSKRNKQHILKSLTKP 78 (813)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (813)
|.++.+.....++...++..+.....++ ..+++..+|++ ++||+++.+ .. +..++ +..++.+..+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~-~~~~~----~~~~~~~~~~~~ 69 (796)
T PLN03138 1 GRSSSTMVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRAS--SIKCSASAS----AS-SSATS----SSASLVANGAVA 69 (796)
T ss_pred CCcccccceeccCCCccCCCccccccccccccccCCCCCCC--ccccccccc----cc-ccCCc----cccccccCcccc
Confidence 4566666666666655444333332222 25566688888 899998876 22 22222 222222332222
Q ss_pred ceeccccceeEEEeeecccCCCCCC---CCCCCCCCCCCCCCCCcccceEeeccchhhccccccccccccCCCCceeeEE
Q 039285 79 LAVASFASATIFIRLTPVLGGGSGG---DGFGGGGGGGGDGFGGGGFWRKVFGTELAIADEDNESQDWDAHGLPANIAVQ 155 (813)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 155 (813)
+ ++...+.++||++| ||||+||||||+|+|++|||.++|+|+++++|+. ...+||.|||++||+|+
T Consensus 70 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 138 (796)
T PLN03138 70 ---------L-LSASAISGGGGGGGGGFGGFGGGGGGGGGGGGGWRFWLRLFAPADAHADEE-QSGDWDSHGLPVNITVP 138 (796)
T ss_pred ---------c-cccccccccCcCCCCCcCCCCCCCCCCCCCCcccchhhhhcChhhhhcCCc-cCCCCccccCcccceEe
Confidence 1 11212223333333 4444444444445556689999999999999966 79999999999999999
Q ss_pred eeeecCccceEEEEEEEEeccCCcccCChhhHhhhcccCCCCcccHHHHHHHHHHHHHcCCcceEEEEEEEcCCCceEEE
Q 039285 156 LSKLSGFRKYKLSEILFFDRQRGATVGTEDSFFEMVSLRPGGVYTRTQLLKELETLATCGMFEKVDMEAKTKPDGTLGLT 235 (813)
Q Consensus 156 ~~~i~e~~~~~I~~I~f~G~~~g~~~~~~~~l~~~l~~~~g~~~~~~~l~~d~~~L~~~Gyf~~V~~~~~~~~d~~~~v~ 235 (813)
+.++++-++++|++|.|.|.+.+.....|+.|.+.|.+++|..|++.+|++|+++|+++|||++|+++++..+|+.+.|+
T Consensus 139 ~~~~~~~~~~~vs~v~~~~~~~~~~~~~e~~l~~~i~~kpG~v~trsqLq~dv~~I~~tG~F~~V~~~v~~~~dg~v~V~ 218 (796)
T PLN03138 139 LSKLSGFKRYKVSEIEFFDRRRNTTVGTEDSFFEMVTLRPGGVYTKAQLQKELETLASCGMFEKVDLEGKTKPDGTLGLT 218 (796)
T ss_pred chhcCCcceEEEEEEEEeccccCCCcchHHHHHHHHhcCCCCccCHHHHHHHHHHHHhcCCceEEEEEEEeCCCCeEEEE
Confidence 99999999999999999998777778899999999999999999999999999999999999999999888888866777
Q ss_pred EEEEeeecccceeEEEeeccccccccceecCccCChHHHHHHhhhhhhhhhhhccccCCCCCChhHHHHHHhhcCCCCee
Q 039285 236 ISFLESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKV 315 (813)
Q Consensus 236 i~~~v~e~p~g~~~k~~~vg~~~~~i~i~Gn~~~~~~~l~~~~~~~~~~y~~~i~~~g~~~l~~~~l~~~~~~lk~g~~~ 315 (813)
|+|.+.+++.++++++||||+|.+...|+||+.+++++|++.|..+++.|++|++.+.+|+||.+.++++|.+++..++|
T Consensus 219 ~~i~Eg~~~~I~~I~~i~~~~~~~~~~~~GN~~fs~~el~~~~~~~e~~~~~~~~~a~~~~Lp~~v~~e~f~~~~~~gkl 298 (796)
T PLN03138 219 ISFTESTWQSADSFRCINVGLMSQSKPIEMDEDMTDKEKMEYYRSQEKDYKRRIRKARPCLLPKSVRREVLGMLRDQGKV 298 (796)
T ss_pred EEEEeCCceeeeeeeecccccccccceeeCCcccCHHHHHHHhhccccccccccccccccccchHHHHHHHhhhccCCcC
Confidence 88887788899999999999999998899999999999999999999999999999999999999999999987666679
Q ss_pred cHHHHHHHHHHHHHHHHHCCCceeEEeeeeeecCeEEEEEEeeceeeeeEEeeeccCCceeecCccHHHHHHhccccCCC
Q 039285 316 SARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGNTQLAVVKRELPKQLRQ 395 (813)
Q Consensus 316 ~~~~l~~~~~~I~~~Y~~~GY~~a~V~~~~~~~~~~i~i~I~EG~~~~i~i~~i~~~G~~i~Gnt~~~vI~r~l~~~l~~ 395 (813)
+.++|++++++|+++|.++||.+++|.+...++++.|+|+|.||++.+|+|++++++|++|+|||+|++|+|+|+..++|
T Consensus 299 N~e~Lq~die~I~~~Y~d~GYafa~V~~~~~id~g~Vtl~V~EG~i~~I~V~~~drig~~i~GNTrD~VIRREL~~~lke 378 (796)
T PLN03138 299 SARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTNEVVCEVVEGDITKVVIQFQDKLGNVVEGNTQLPIIDRELPKQLRQ 378 (796)
T ss_pred CHHHHHHHHHHHHHHHHhCCCceEEEecccccCCceEEEEEecccEEEEEEEecccccccccCCccCeEEeeecccccCC
Confidence 99999999999999999999999999988777888999999999999999999999988999999999999999611599
Q ss_pred CCccChHHHHHHHHHHhcCCCceeeEeeecCCCCCCCeEEEEEEEEEccCceEEEeEEEeecCCCCCCCCcccCCCeEEE
Q 039285 396 GNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTV 475 (813)
Q Consensus 396 G~~yn~~~l~~~~~~L~~~g~F~~V~i~~~~~~~~~~~v~l~i~V~E~~~~~~~lg~g~s~~~G~~G~st~~~~~~~~~~ 475 (813)
|++||..++++++++|+++|||++|++++.|....++.++|+|+|+|.++.+.+++++|+...|..+.++..+.++.+++
T Consensus 379 Gd~fN~~~l~~slqRL~~LGlFedV~V~~~Pg~~~p~~VdL~V~VkE~e~~t~~ls~g~g~~~G~g~~Psl~S~g~~Gtv 458 (796)
T PLN03138 379 GHIFNIEAGKQALRNINSLALFSNIEVNPRPDEKNEGGIVVEIKLKELEPKSAEVSTEWSIVPGRGGRPTLASIQPGGTV 458 (796)
T ss_pred CcccCHHHHHHHHHHHHhCCCCceeEEEeccCCCCCCeEEEEEEEEEccCCceeEecccccccccCCCCccccccceeEE
Confidence 99999999999999999999999999999987655689999999999999999999999887776667777777889999
Q ss_pred EEeeecccCCcceEEEEEEeecccCCCccceEEEEEEeccccCCCCCCcceEEEEEeeccccCccccCCCCCCcCCceeE
Q 039285 476 SFEHRNLQGLNRSILGSVTTSNFLNPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWV 555 (813)
Q Consensus 476 s~~~~Nl~G~G~~l~~~~~~s~~~~~~~~~~~~lsy~~P~l~~~~~p~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 555 (813)
+|+|+||+|+|++|.++++.++++.++++..|+++|++||+.+.++|.++++.+++|++++.+.+|+.++.+.+++..|.
T Consensus 459 s~~~~NL~G~g~~L~~~v~~s~~~~g~~d~~f~lsytdPWi~g~~d~~rts~~~~~f~~r~~s~vf~~~~~~~~~~~~~~ 538 (796)
T PLN03138 459 SFEHRNIQGLNRSILGSVTSSNLLNPQDDLSFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPPIWV 538 (796)
T ss_pred EEeccccccccceEEEEEEeecccCCccceEEEEEeecccccCCCCcccccEEEEEEecCcCCceeeCCCCcccCCcceE
Confidence 99999999999999999998877778899999999999999875557779999999999998888988766556667789
Q ss_pred eeeeeEEEEeEecccCceEEEEEEEEEEEeecCCCCcCCCCccccCCCCcCCCCCCccccCCCcceeEEEEEEEEEeCCC
Q 039285 556 DRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTK 635 (813)
Q Consensus 556 ~~~G~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~g~~~~~~l~~~~t~D~rD 635 (813)
.|.|+.+.++++|++++++++++.++++.++|+.+++++.+.+.+|.+.++++++|+++|+.+.|++..+++.++||++|
T Consensus 539 ~R~G~~~~~~rp~~~~~~~s~g~~~q~v~~~d~~g~~~~~~~~~~~~~~~~~~g~plT~S~~g~D~l~~~~~~~trd~~~ 618 (796)
T PLN03138 539 DRAGFKANITENFTRQSKFTYGLVVEEITTRDETSHICTHGQRVLPSGGLSADGPPTTLSGTGIDRMAFLQANITRDNTK 618 (796)
T ss_pred eecccceEeecccCCCCceEEEEEEEEEEeecCCCCccccccccccccccccCCCceeeccCCcchhhheeeeeEeccCC
Confidence 99999999999999988899999999999999999888877788888778889999999999999999999999999999
Q ss_pred CCCCCCCccEEEEEEEecccCCCCCcceEEEEEEEEEEEEcccccccCCCCCCcEEEEEEEeeeeecCCCcccccccCCC
Q 039285 636 FVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGP 715 (813)
Q Consensus 636 ~~~~Pt~G~~~~~~~e~~~~lg~d~~~f~k~~~~~~~y~~l~~~~~~~~~~~~~vl~~r~~~G~~~g~lp~~erF~lGG~ 715 (813)
++..||.|.++.+++||++++|.++.+|+|+.+++++|+|+...+.+.+++.+.+|++++++|++.|+||+||+|.|||.
T Consensus 619 ~~~~pt~G~~~~~~~EQ~lpvg~~~~~fNR~~~~~s~fipv~~~~~~~~~~~Pq~la~~~~aG~~~GdLPpYEAF~LGG~ 698 (796)
T PLN03138 619 FVNGAVVGDRHIFQVDQGLGIGSKFPFFNRHQLTVTKFIQLNKVEKGAGKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGP 698 (796)
T ss_pred CCCCCCccceEEEEeeeeccccCCCCceEEEEEEEEEEEeeccccccccCCCCcEEEEEEeccceecCCCcHHhcccCCC
Confidence 99999999999999999999999999999999999999999644333333457999999999999999999999999999
Q ss_pred CccccccCCccCccceeeEEeEEEEEEecceeEEEEEeecccCCCCCCCCCCCccccccCCceeeeeEEEEEeeEEEEEE
Q 039285 716 YSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYA 795 (813)
Q Consensus 716 ~svRGy~~~~ig~G~~~~~~s~Elr~pl~~~~~~~F~D~G~vw~~~~~~~~~~~~~~~~~~~~~s~G~GlrlGpirld~a 795 (813)
+|||||.++++|.|++++++++||||||..+.+++|+|+|+.|++..+++++|..++++++..+|||+|+|+||||+|||
T Consensus 699 nSVRGY~eG~lg~gRs~l~asaEyRfPi~~~~g~~F~D~GsdLgS~~~V~G~P~~~r~kpG~G~syG~GvrlGpiR~dYa 778 (796)
T PLN03138 699 YSVRGYNMGELGAARNILEVAAELRIPVRNTHVYAFAEHGTDLGSSKDVKGNPTEFFRRAGHGSSYGVGVKLGLVRAEYA 778 (796)
T ss_pred CcccCcccCcccccceeEEEEEEEEeeeccceEEEEEEeccccCCCCCCCCCchhhccCCCCCcccceeeEecceeEEEe
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEEeccCC
Q 039285 796 VDHNTGTGALFFRFGERY 813 (813)
Q Consensus 796 ~~~~~~~~~f~F~iG~~F 813 (813)
++++.++++|||+||.+|
T Consensus 779 ~~~~~G~~r~hfg~GerF 796 (796)
T PLN03138 779 VDHNAGTGAIFFRFGERF 796 (796)
T ss_pred ecCCCCCceEEEeccccC
Confidence 998778999999999998
|
|
| >TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family | Back alignment and domain information |
|---|
| >COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK11067 outer membrane protein assembly factor YaeT; Provisional | Back alignment and domain information |
|---|
| >TIGR03303 OM_YaeT outer membrane protein assembly complex, YaeT protein | Back alignment and domain information |
|---|
| >COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF01103 Bac_surface_Ag: Surface antigen; InterPro: IPR000184 The protein sequences of d15 from various strains of Haemophilus influenzae are highly conserved, with only a small variable region identified near the carboxyl terminus of the protein [] | Back alignment and domain information |
|---|
| >COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG2602 consensus Predicted cell surface protein homologous to bacterial outer membrane proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11067 outer membrane protein assembly factor YaeT; Provisional | Back alignment and domain information |
|---|
| >TIGR03303 OM_YaeT outer membrane protein assembly complex, YaeT protein | Back alignment and domain information |
|---|
| >COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF03865 ShlB: Haemolysin secretion/activation protein ShlB/FhaC/HecB; InterPro: IPR005565 Haemolysin (HlyA) and related toxins are secreted across both the cytoplasmic and outer membranes of Gram-negative bacteria in a process which proceeds without a periplasmic intermediate | Back alignment and domain information |
|---|
| >PLN03138 Protein TOC75; Provisional | Back alignment and domain information |
|---|
| >PF07244 Surf_Ag_VNR: Surface antigen variable number repeat; InterPro: IPR010827 This motif is found primarily in bacterial surface antigens, normally as variable number repeats at the N terminus | Back alignment and domain information |
|---|
| >PF07244 Surf_Ag_VNR: Surface antigen variable number repeat; InterPro: IPR010827 This motif is found primarily in bacterial surface antigens, normally as variable number repeats at the N terminus | Back alignment and domain information |
|---|
| >TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family | Back alignment and domain information |
|---|
| >PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO) | Back alignment and domain information |
|---|
| >COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO) | Back alignment and domain information |
|---|
| >COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >KOG3915 consensus Transcription regulator dachshund, contains SKI/SNO domain [Transcription] | Back alignment and domain information |
|---|
| >PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 813 | ||||
| 3mc8_A | 316 | Potra1-3 Of The Periplasmic Domain Of Omp85 From An | 4e-10 | ||
| 2x8x_X | 235 | Structure Of The N-Terminal Domain Of Omp85 From Th | 5e-09 |
| >pdb|3MC8|A Chain A, Potra1-3 Of The Periplasmic Domain Of Omp85 From Anabaena Length = 316 | Back alignment and structure |
|
| >pdb|2X8X|X Chain X, Structure Of The N-Terminal Domain Of Omp85 From The Thermophilic Cyanobacterium Thermosynechococcus Elongatus Length = 235 | Back alignment and structure |
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 813 | |||
| 2qdz_A | 554 | TPSB transporter FHAC; beta barrel, potra domain, | 100.0 | |
| 3mc9_A | 316 | ALR2269 protein; polypeptide transport associated, | 99.95 | |
| 2x8x_X | 235 | TLR1789 protein, OMP85; chaperone, TOC75, protein | 99.94 | |
| 3efc_A | 395 | OMP85, outer membrane protein assembly factor YAET | 99.93 | |
| 3efc_A | 395 | OMP85, outer membrane protein assembly factor YAET | 99.92 | |
| 2qdf_A | 335 | OMP85, outer membrane protein assembly factor YAET | 99.91 | |
| 2qdf_A | 335 | OMP85, outer membrane protein assembly factor YAET | 99.83 | |
| 3q6b_A | 189 | Outer membrane protein assembly complex, YAET Pro; | 99.78 | |
| 3q6b_A | 189 | Outer membrane protein assembly complex, YAET Pro; | 99.21 | |
| 2x8x_X | 235 | TLR1789 protein, OMP85; chaperone, TOC75, protein | 99.08 | |
| 3mc9_A | 316 | ALR2269 protein; polypeptide transport associated, | 98.74 | |
| 2qdz_A | 554 | TPSB transporter FHAC; beta barrel, potra domain, | 98.72 |
| >2qdz_A TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis} PDB: 3njt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=413.15 Aligned_cols=459 Identities=14% Similarity=0.122 Sum_probs=331.2
Q ss_pred ceeEEEeeccccccccceecCccCChHHHHHHhhhhhhhhhhhccccCCCCCChhHHHHHHhhcCCCCeecHHHHHHHHH
Q 039285 246 AERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKRRIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRD 325 (813)
Q Consensus 246 g~~~k~~~vg~~~~~i~i~Gn~~~~~~~l~~~~~~~~~~y~~~i~~~g~~~l~~~~l~~~~~~lk~g~~~~~~~l~~~~~ 325 (813)
+++++| .+|.|+||..+++++|.+ +++ .+.|++|+.+.|+++++
T Consensus 56 g~~~~i-------~~I~~~G~~~~~~~~l~~----------------------------~~~-~~~G~~~~~~~l~~~~~ 99 (554)
T 2qdz_A 56 GHTVTV-------HAVDLDFGVEGRLFDPAP----------------------------LVQ-DYLNRPLDNEQLFLLVK 99 (554)
T ss_dssp CCSSSS-------CCEEEECCSSSCCCSCST----------------------------TST-TSSSSCBCSTTHHHHHH
T ss_pred CceEEE-------EEEEEECCccCCHHHHHH----------------------------HhH-hhcCCCCCHHHHHHHHH
Confidence 777764 677899998877655433 233 46799999999999999
Q ss_pred HHHHHHHHCCCceeEEe-eeeeecCeEEEEEEeeceeeeeEEeeeccCCceeecC--ccHHHHHH---hccccCCCCCcc
Q 039285 326 RVQKWYHDEGYACAQVV-NFGNLNTREVVCEVVEGDITQLVVQFQDKLGNVVEGN--TQLAVVKR---ELPKQLRQGNVF 399 (813)
Q Consensus 326 ~I~~~Y~~~GY~~a~V~-~~~~~~~~~i~i~I~EG~~~~i~i~~i~~~G~~i~Gn--t~~~vI~r---~l~~~l~~G~~y 399 (813)
+|+++|.++||++|+|. +.++++++.|+|.|+||++..| .|.|| +++.+|++ +++ +++|++|
T Consensus 100 ~i~~~y~~~GY~~a~v~~~~~~~~~g~l~i~v~eG~i~~I----------~i~G~~~~~~~~l~~~~~~~~--~~~G~~~ 167 (554)
T 2qdz_A 100 ALSAALYDRGYATSIVTFVPPGVVDGVLKLKVEWGRIKGW----------LIDGKPLEGTRDRMMVFSAMP--GWQDKVL 167 (554)
T ss_dssp HHHHHHHHTTCTTCEEEEEEEEEETTEEEEEEECCEEEEE----------EETTEECCSHHHHHHHHHHST--TCTTCBC
T ss_pred HHHHHHHHcCceeeeEEcccccccCCEEEEEEEeEEEEEE----------EECCCCccchhhhhhhhhhcc--ccCCCcC
Confidence 99999999999999995 4455567789999999987665 35576 45889999 999 9999999
Q ss_pred ChHHHHHHHHHHhcCCCceeeEeeecCCCCCCCeEEEEEEEEEccCceEEEeEEEeecCCCCCCCCcccCCCeEEEEEee
Q 039285 400 NIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELDQKSAEVSAEWSLVPGRGGRPTFASLQPGGTVSFEH 479 (813)
Q Consensus 400 n~~~l~~~~~~L~~~g~F~~V~i~~~~~~~~~~~v~l~i~V~E~~~~~~~lg~g~s~~~G~~G~st~~~~~~~~~~s~~~ 479 (813)
|..+|++++++|++++ .+|++.+.|... ++.++|+|+|+|+++.. +++++++.. .|..+...+ .+.+++.+
T Consensus 168 n~~~le~~~~~L~~~~--~~v~~~~~p~~~-~g~~~l~v~v~e~~~~~--~~~g~~~~g--~g~~~tg~~--~~~~~~~~ 238 (554)
T 2qdz_A 168 NVFDIDQAIYNINNGG--KTGNITIVPADE-YGYSYLDLQLQRRALPR--VSLGMDNSG--PGTPENGRY--KYNASVTA 238 (554)
T ss_dssp CHHHHHHHHHHHCSSS--EEEEEEEEECSS-TTEEEEEEEEEECCSCE--EEEEEEECS--CSSSCSSCE--EEEEEEEE
T ss_pred CHHHHHHHHHHHhcCc--hhceEEEecCCC-CCeeEEEEEEeeCCcEE--EEEEEcCCC--CCCCCccce--EEEEEEEe
Confidence 9999999999999998 788888888665 48999999999988654 555555421 001122233 88999999
Q ss_pred ecccCCcceEEEEEEeeccc--CCCccceEEEEEEeccccCCCCCCcceEEEEEeeccccCccccCCCCCCcCCceeEee
Q 039285 480 RNLQGLNRSILGSVTTSNFL--NPQDDLAFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDR 557 (813)
Q Consensus 480 ~Nl~G~G~~l~~~~~~s~~~--~~~~~~~~~lsy~~P~l~~~~~p~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 557 (813)
+|++|.|+++.+++..+... .......+.++|+.||.. +.+++++..++..+.... . .....|..++
T Consensus 239 ~n~~g~gd~l~~~~~~~~~~~~~~~~~~~~~~~y~~P~~~-------~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~s 307 (554)
T 2qdz_A 239 NDLLGLNDTLGLYIGNRYYRDAGHDAERNYDLMYSVPLGR-------TRLDLQTGYSTYRNLLKT--R--YGQYQSAGNS 307 (554)
T ss_dssp ECSSSSSCEEEEEEEEECCSCCSSCEEEEEEEEEEEEETT-------EEEEEEEEEEEEECCCSS--S--SCCCCCEEEE
T ss_pred CCCCCCCcEEEEEEEecCccccCCCCceEEEEEEEEEEec-------CeEEEEEEEeEEEEEccC--C--cceEEEEeeE
Confidence 99999999999999874210 113578999999999853 234444333322111111 0 0112355677
Q ss_pred eeeEEEEeEeccc--CceEEEEEEEEEEEeecCCCCcCCCCccccCCCCcCCCCCCccccCCCcceeEEEEEEEEEeCCC
Q 039285 558 AGLKANITENFTR--QSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTK 635 (813)
Q Consensus 558 ~G~~~~l~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~g~~~~~~l~~~~t~D~rD 635 (813)
.++++.+++++.+ .+++++++.+.+.+..+...... ++ ........+.++++||+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~~~~~~~ 366 (554)
T 2qdz_A 308 RSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYLAGTR------LD---------------VSSKHYSDVTVGMQYSTQR 366 (554)
T ss_dssp EEEEEEEEEEEECCSSEEEEEEEEEEEEEEEEECCTTS------CC---------------CEEEEEEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEECCCeEEEEEEEEEEEEeeeeeCCcC------cc---------------ccCceEEEEEEEEEEEEEe
Confidence 7888999999854 44455555544433222111000 00 0112356788899999875
Q ss_pred CCCCCCCccEEEEEEEecccC-----------CCCCcceEEEEEEEEEEEEcccccccCCCCCCcEEEEEEEeeeeecCC
Q 039285 636 FVNGAIVGERNVFQVDQGLGI-----------GSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDL 704 (813)
Q Consensus 636 ~~~~Pt~G~~~~~~~e~~~~l-----------g~d~~~f~k~~~~~~~y~~l~~~~~~~~~~~~~vl~~r~~~G~~~g~l 704 (813)
|..++...+.+..+..+ +++.. |.|+.+++++|+|+... ...+++.+++.+++..+++
T Consensus 367 ----~~~~~~~~~~~~~G~~~~a~~~~~~~~~~~~~~-f~k~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~l 435 (554)
T 2qdz_A 367 ----GANAYFGDLSFTRGVGVNNGKYAAYDERGPQGN-VSRFNGSLAWTRYMALA------GQPIQWASQLGFQYSRQQL 435 (554)
T ss_dssp ----SSEEEEEEEEEEECCCC--------------CC-CEEEEEEEEEEEEEEET------TEEEEEEEEEEEEECSSCS
T ss_pred ----cCeEEEEEEEEEecCCCCCCcCcccccCCCcce-EEEEEEEEEEEEEcccc------CCCEEEEEEEEeEecCCCC
Confidence 45556666666555321 34556 69999999999997310 0257788888888877789
Q ss_pred CcccccccCCCCccccccCCccCccceeeEEeEEEEEEe--------cceeEEEEEeecccCCCCCCCCCCCccccccCC
Q 039285 705 PSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPV--------KNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMG 776 (813)
Q Consensus 705 p~~erF~lGG~~svRGy~~~~ig~G~~~~~~s~Elr~pl--------~~~~~~~F~D~G~vw~~~~~~~~~~~~~~~~~~ 776 (813)
|++|+|++||.++||||+.+.++||+.++.+++|||+|+ ..+.+++|+|+|++|+...+. . ..
T Consensus 436 p~~e~f~lGG~~sVRGy~~~~l~pGd~g~~~~~El~~~~~~~~~~~~~~~~~~~F~D~G~v~~~~~~~---~------~~ 506 (554)
T 2qdz_A 436 LNSYQITVGDEYTVRGYNLRTSQSGDSGVYLSNTLTVPVQFSLLGKQASVAPFVGADVGALKSNHPDA---R------TI 506 (554)
T ss_dssp SSSEECCSCCCCCCTTCCCCCSCCSSCSSCCEESEEEEEEEEEEECCSSCEEEEEEEEEEEECSSSSC---C------EE
T ss_pred CcHHhEecCCCCeECCcccccccCCCccEEEEEEEEeeccccccCccceEEEEEEEEEEEEecCCCCC---C------CC
Confidence 999999999999999999999987999999999999997 357889999999999754311 1 22
Q ss_pred ceeeeeEEEE----EeeEEEEEEEecC------CCCeEE-EEEeccCC
Q 039285 777 HGSSYGVGAK----LGLVRAEYAVDHN------TGTGAL-FFRFGERY 813 (813)
Q Consensus 777 ~~~s~G~Glr----lGpirld~a~~~~------~~~~~f-~F~iG~~F 813 (813)
+++|+|+|+| +||+|+|||++.. +...+| ||+||..|
T Consensus 507 ~~~g~G~Glr~~~~~~~l~l~~a~pl~~~~~~~~~~~~~~~fsig~~F 554 (554)
T 2qdz_A 507 RMAGLAAGVRFDLPYARMSFTYSKPVGAQPGGAPRAPVWLYINAGLSF 554 (554)
T ss_dssp EEEEEEEEEEECCSSEEEEEEEEEECSCSCSSSCCCCSEEEEEEEEEC
T ss_pred EEEEEEEEEEEecCcEEEEEEEEeeccCCcccccCCceEEEEEEEEEC
Confidence 6799999999 5899999999642 146789 99999987
|
| >3mc9_A ALR2269 protein; polypeptide transport associated, potra, outer bacterial MEM protein membrane transport, beta barrel biogenesis, membran; 2.20A {Nostoc SP} PDB: 3mc8_A | Back alignment and structure |
|---|
| >2x8x_X TLR1789 protein, OMP85; chaperone, TOC75, protein targeting; 1.97A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
| >3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane, ME protein; 3.30A {Escherichia coli} | Back alignment and structure |
|---|
| >3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane, ME protein; 3.30A {Escherichia coli} | Back alignment and structure |
|---|
| >2qdf_A OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A | Back alignment and structure |
|---|
| >2qdf_A OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A | Back alignment and structure |
|---|
| >3q6b_A Outer membrane protein assembly complex, YAET Pro; potra fold, insertion of outer membrane proteins, protein BI; 1.50A {Escherichia coli} PDB: 3og5_A | Back alignment and structure |
|---|
| >3q6b_A Outer membrane protein assembly complex, YAET Pro; potra fold, insertion of outer membrane proteins, protein BI; 1.50A {Escherichia coli} PDB: 3og5_A | Back alignment and structure |
|---|
| >2x8x_X TLR1789 protein, OMP85; chaperone, TOC75, protein targeting; 1.97A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
| >3mc9_A ALR2269 protein; polypeptide transport associated, potra, outer bacterial MEM protein membrane transport, beta barrel biogenesis, membran; 2.20A {Nostoc SP} PDB: 3mc8_A | Back alignment and structure |
|---|
| >2qdz_A TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis} PDB: 3njt_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 813 | ||||
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 0.003 |
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.0 bits (88), Expect = 0.003
Identities = 19/146 (13%), Positives = 49/146 (33%), Gaps = 27/146 (18%)
Query: 229 DGTLGLTISF-LESTWQSAERIRCINVGLMQQSKPIEMDADMTEREKLEYYQSQEKDYKR 287
+G T +++ + R + L +Q IE+D +T EK Y + Y +
Sbjct: 54 NGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEEKFPYM---VEWYTK 110
Query: 288 RIDKARPCLLPQSVHNEILQILKDHGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNL 347
+P++ ++ +I+ D +++ + ++ L
Sbjct: 111 SHGLLIEQGIPKA---KLKEIVADSDV-------MLKEGYENFFGK-------------L 147
Query: 348 NTREVVCEVVEGDITQLVVQFQDKLG 373
+ + I ++ + + G
Sbjct: 148 QQHGIPVFIFSAGIGDVLEEVIRQAG 173
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00